Query 013483
Match_columns 442
No_of_seqs 189 out of 2549
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 11:26:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013483.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013483hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 3E-59 1E-63 474.6 43.2 430 6-442 18-451 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 4.1E-49 1.4E-53 396.3 35.8 363 6-408 10-392 (420)
3 3st8_A Bifunctional protein GL 100.0 8.1E-47 2.8E-51 387.6 31.5 389 6-442 10-444 (501)
4 1hm9_A GLMU, UDP-N-acetylgluco 100.0 6.6E-44 2.2E-48 363.6 32.7 383 8-442 11-435 (468)
5 2ggo_A 401AA long hypothetical 100.0 3.5E-44 1.2E-48 358.5 29.3 354 9-442 1-389 (401)
6 4fce_A Bifunctional protein GL 100.0 6.6E-44 2.3E-48 362.7 28.4 381 7-442 7-430 (459)
7 2v0h_A Bifunctional protein GL 100.0 4E-42 1.4E-46 349.3 31.3 380 7-442 4-427 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 3.7E-35 1.3E-39 279.0 20.4 244 8-289 2-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 5.3E-33 1.8E-37 262.3 23.3 236 7-290 23-261 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 2E-32 7E-37 262.7 22.1 250 1-290 1-283 (302)
11 2ux8_A Glucose-1-phosphate uri 100.0 5.4E-32 1.8E-36 259.1 19.8 248 5-290 11-281 (297)
12 1tzf_A Glucose-1-phosphate cyt 100.0 2.1E-31 7.1E-36 250.0 22.5 245 8-289 2-251 (259)
13 2pa4_A UTP-glucose-1-phosphate 100.0 5.2E-31 1.8E-35 255.0 22.0 248 7-290 11-284 (323)
14 1fxo_A Glucose-1-phosphate thy 100.0 2.3E-30 7.9E-35 246.7 23.1 233 8-287 2-240 (293)
15 3pnn_A Conserved domain protei 100.0 1.2E-30 4E-35 250.2 20.0 256 6-288 3-291 (303)
16 4evw_A Nucleoside-diphosphate- 100.0 1.1E-30 3.8E-35 244.0 18.7 230 11-286 2-245 (255)
17 1lvw_A Glucose-1-phosphate thy 100.0 5.1E-30 1.7E-34 244.3 23.2 233 8-287 3-241 (295)
18 1mc3_A Glucose-1-phosphate thy 100.0 2.5E-30 8.5E-35 246.6 19.6 234 8-288 3-242 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 5.8E-29 2E-33 239.1 18.3 241 7-286 3-282 (308)
20 2x65_A Mannose-1-phosphate gua 99.9 1.5E-27 5E-32 231.4 15.2 233 9-282 2-270 (336)
21 1jyk_A LICC protein, CTP:phosp 99.9 3.4E-27 1.2E-31 220.4 16.6 221 7-287 24-251 (254)
22 2cu2_A Putative mannose-1-phos 99.9 2.1E-27 7.3E-32 230.3 12.5 234 8-285 2-268 (337)
23 3oam_A 3-deoxy-manno-octuloson 99.9 9.8E-26 3.3E-30 210.3 18.2 239 8-289 2-250 (252)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 2.3E-23 7.7E-28 193.9 20.8 236 7-285 8-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 3E-23 1E-27 193.9 18.3 238 6-286 16-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 5.8E-22 2E-26 182.6 20.7 225 8-286 2-231 (234)
27 2xme_A CTP-inositol-1-phosphat 99.9 1.6E-22 5.4E-27 186.3 15.3 214 6-285 16-231 (232)
28 1h7e_A 3-deoxy-manno-octuloson 99.9 1E-21 3.5E-26 182.3 19.0 228 8-287 2-238 (245)
29 4fcu_A 3-deoxy-manno-octuloson 99.9 6.1E-21 2.1E-25 177.2 20.7 236 9-289 2-251 (253)
30 1vic_A 3-deoxy-manno-octuloson 99.9 1.3E-20 4.3E-25 176.8 20.5 244 8-289 2-254 (262)
31 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.8 5.4E-22 1.9E-26 195.3 7.5 257 130-442 11-319 (374)
32 3f1c_A Putative 2-C-methyl-D-e 99.8 5.8E-20 2E-24 170.6 15.5 230 6-290 1-236 (246)
33 2icy_A Probable UTP-glucose-1- 99.8 2.2E-19 7.7E-24 179.2 19.4 340 7-399 78-469 (469)
34 2xwl_A 2-C-methyl-D-erythritol 99.8 2.8E-19 9.7E-24 163.3 16.5 214 8-288 2-220 (223)
35 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 2.7E-19 9.3E-24 164.8 15.9 224 9-287 3-234 (236)
36 1vgw_A 4-diphosphocytidyl-2C-m 99.8 1.5E-18 5.2E-23 159.3 19.9 220 7-286 5-228 (231)
37 2yc3_A 2-C-methyl-D-erythritol 99.8 3.9E-19 1.3E-23 163.0 14.3 219 7-287 3-225 (228)
38 1ezi_A CMP-N-acetylneuraminic 99.8 1.2E-18 3.9E-23 159.9 16.5 218 7-287 3-224 (228)
39 2i5k_A UTP--glucose-1-phosphat 99.8 3.6E-18 1.2E-22 171.5 19.0 343 6-399 90-485 (488)
40 1i52_A 4-diphosphocytidyl-2-C- 99.8 6.6E-18 2.3E-22 155.7 16.9 221 4-289 3-230 (236)
41 2dpw_A Hypothetical protein TT 99.8 1.3E-19 4.4E-24 166.7 4.6 200 8-280 2-231 (232)
42 1qwj_A Cytidine monophospho-N- 99.8 8.3E-18 2.8E-22 154.3 15.7 217 7-288 2-222 (229)
43 3rsb_A Adenosylcobinamide-phos 99.7 2.3E-17 7.8E-22 147.5 11.2 130 9-167 1-137 (196)
44 2wee_A MOBA-related protein; u 99.7 9E-17 3.1E-21 143.6 13.7 115 7-151 4-120 (197)
45 3q80_A 2-C-methyl-D-erythritol 99.7 7.7E-16 2.6E-20 140.8 19.6 217 8-286 7-229 (231)
46 2waw_A MOBA relate protein; un 99.7 1.5E-16 5E-21 142.4 14.6 188 7-287 4-196 (199)
47 2px7_A 2-C-methyl-D-erythritol 99.7 1.2E-16 4.1E-21 147.2 13.2 206 7-288 24-233 (236)
48 1vpa_A 2-C-methyl-D-erythritol 99.7 7.8E-16 2.7E-20 141.5 18.3 215 7-288 12-229 (234)
49 3hsq_A Acyl-[acyl-carrier-prot 99.7 1.8E-16 6E-21 148.1 13.5 146 297-442 4-172 (259)
50 1j2z_A Acyl-[acyl-carrier-prot 99.7 3.6E-16 1.2E-20 146.7 14.0 147 296-442 4-173 (270)
51 3r0s_A Acyl-[acyl-carrier-prot 99.7 4.6E-16 1.6E-20 145.8 14.1 147 296-442 7-177 (266)
52 3t57_A UDP-N-acetylglucosamine 99.7 4.2E-16 1.4E-20 148.9 14.0 148 295-442 9-201 (305)
53 4eqy_A Acyl-[acyl-carrier-prot 99.6 1E-15 3.6E-20 144.7 13.7 149 294-442 23-194 (283)
54 3eh0_A UDP-3-O-[3-hydroxymyris 99.6 2.2E-15 7.6E-20 146.1 14.9 170 271-442 74-291 (341)
55 2qia_A UDP-N-acetylglucosamine 99.6 2.3E-15 7.7E-20 140.9 13.8 147 296-442 8-177 (262)
56 4e6u_A Acyl-[acyl-carrier-prot 99.6 2.8E-15 9.5E-20 140.5 13.9 148 295-442 9-179 (265)
57 2e8b_A Probable molybdopterin- 99.6 5.1E-16 1.7E-20 139.4 7.7 180 6-286 12-198 (201)
58 3pmo_A UDP-3-O-[3-hydroxymyris 99.6 9.4E-15 3.2E-19 143.0 16.6 173 270-442 95-313 (372)
59 4e79_A UDP-3-O-acylglucosamine 99.6 6.2E-15 2.1E-19 143.7 14.7 173 269-442 78-296 (357)
60 3d5n_A Q97W15_sulso; NESG, SSR 99.6 3.1E-15 1.1E-19 133.8 10.1 186 8-289 2-191 (197)
61 1jv1_A Glcnac1P uridyltransfer 99.6 3.2E-14 1.1E-18 143.5 17.7 213 6-239 100-344 (505)
62 1e5k_A Molybdopterin-guanine d 99.6 9.9E-15 3.4E-19 130.9 12.5 111 6-151 4-116 (201)
63 3r8y_A 2,3,4,5-tetrahydropyrid 99.6 2.3E-15 8E-20 138.8 5.8 142 257-429 37-198 (240)
64 4e79_A UDP-3-O-acylglucosamine 99.5 2.4E-14 8.2E-19 139.5 12.7 49 381-429 247-296 (357)
65 2oeg_A UTP-glucose-1-phosphate 99.5 6.9E-13 2.4E-17 133.0 21.5 263 7-289 74-395 (505)
66 3fs8_A QDTC; acetyltransferase 99.5 6.7E-14 2.3E-18 131.7 13.2 29 414-442 170-203 (273)
67 3mqg_A Lipopolysaccharides bio 99.5 8.1E-14 2.8E-18 124.0 12.1 103 322-442 16-135 (192)
68 1qre_A Carbonic anhydrase; bet 99.5 9.5E-14 3.2E-18 128.5 13.0 117 297-442 57-207 (247)
69 1w55_A ISPD/ISPF bifunctional 99.5 3.5E-14 1.2E-18 138.4 10.3 196 7-283 2-202 (371)
70 3ngw_A Molybdopterin-guanine d 99.5 1.8E-13 6E-18 123.1 14.0 115 9-161 1-117 (208)
71 3c8v_A Putative acetyltransfer 99.5 1.2E-13 4.2E-18 138.6 10.0 100 321-441 291-392 (496)
72 1v3w_A Ferripyochelin binding 99.5 8E-13 2.7E-17 115.4 13.7 111 298-436 9-133 (173)
73 3r1w_A Carbonic anhydrase; bet 99.4 8E-13 2.7E-17 117.2 13.5 114 299-441 19-148 (189)
74 3tv0_A Dynactin subunit 6; LEF 99.4 6.2E-13 2.1E-17 118.4 12.7 111 305-440 12-145 (194)
75 3r3r_A Ferripyochelin binding 99.4 9.9E-13 3.4E-17 116.4 13.7 116 297-441 13-144 (187)
76 3ixc_A Hexapeptide transferase 99.4 9.3E-13 3.2E-17 116.9 13.5 118 295-441 29-156 (191)
77 1xhd_A Putative acetyltransfer 99.4 1.5E-12 5.2E-17 113.6 14.1 113 298-439 11-132 (173)
78 3fs8_A QDTC; acetyltransferase 99.4 8.2E-13 2.8E-17 124.2 13.0 66 296-361 11-94 (273)
79 3vbi_A ANTD, galactoside O-ace 99.4 1.1E-12 3.8E-17 117.9 12.9 88 337-442 52-167 (205)
80 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 2.3E-12 7.9E-17 126.5 16.1 58 301-358 126-187 (374)
81 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 8.6E-13 2.9E-17 127.9 12.4 31 399-429 261-291 (341)
82 4eqy_A Acyl-[acyl-carrier-prot 99.4 1.5E-12 5E-17 123.0 13.5 135 300-442 23-176 (283)
83 3kwd_A Carbon dioxide concentr 99.4 2.8E-12 9.6E-17 115.9 14.0 97 321-442 57-178 (213)
84 2yqc_A UDP-N-acetylglucosamine 99.4 2E-12 6.9E-17 129.9 14.0 218 7-239 102-352 (486)
85 3mqg_A Lipopolysaccharides bio 99.4 2.3E-12 7.8E-17 114.5 12.6 119 295-437 5-146 (192)
86 3jqy_B NEUO, polysialic acid O 99.4 2.3E-12 7.8E-17 119.5 12.8 104 321-442 63-196 (252)
87 3ixc_A Hexapeptide transferase 99.4 3.2E-12 1.1E-16 113.4 13.1 96 322-442 34-145 (191)
88 4e6u_A Acyl-[acyl-carrier-prot 99.4 3.8E-12 1.3E-16 119.1 13.4 135 304-442 6-161 (265)
89 1xhd_A Putative acetyltransfer 99.4 4.9E-12 1.7E-16 110.4 13.1 96 322-442 13-123 (173)
90 3oc9_A UDP-N-acetylglucosamine 99.4 1.1E-11 3.7E-16 120.6 16.1 216 6-238 33-276 (405)
91 3r0s_A Acyl-[acyl-carrier-prot 99.4 2.9E-12 9.9E-17 119.8 11.7 30 413-442 125-159 (266)
92 3r3r_A Ferripyochelin binding 99.4 5.7E-12 1.9E-16 111.5 12.9 96 322-442 16-133 (187)
93 2qia_A UDP-N-acetylglucosamine 99.4 9.1E-12 3.1E-16 116.3 14.4 56 298-361 4-59 (262)
94 3vbi_A ANTD, galactoside O-ace 99.3 7.4E-12 2.5E-16 112.4 12.2 110 302-437 35-178 (205)
95 3hsq_A Acyl-[acyl-carrier-prot 99.3 5.6E-12 1.9E-16 117.4 11.6 11 430-440 142-152 (259)
96 2v0h_A Bifunctional protein GL 99.3 4.1E-12 1.4E-16 128.3 11.0 103 321-442 265-409 (456)
97 3eg4_A 2,3,4,5-tetrahydropyrid 99.3 3.7E-12 1.3E-16 120.7 9.5 12 430-441 254-265 (304)
98 3tv0_A Dynactin subunit 6; LEF 99.3 1.3E-11 4.4E-16 109.8 12.5 97 321-442 12-135 (194)
99 1v3w_A Ferripyochelin binding 99.3 1.7E-11 5.9E-16 106.9 12.9 94 324-442 13-121 (173)
100 1j2z_A Acyl-[acyl-carrier-prot 99.3 1.9E-11 6.6E-16 114.4 14.0 118 321-442 19-155 (270)
101 3tk8_A 2,3,4,5-tetrahydropyrid 99.3 8.7E-13 3E-17 125.4 4.5 40 322-361 158-198 (316)
102 3r5d_A Tetrahydrodipicolinate 99.3 2.2E-12 7.7E-17 120.6 7.0 87 337-442 196-287 (347)
103 3kwd_A Carbon dioxide concentr 99.3 1.8E-11 6.1E-16 110.6 12.8 93 322-442 46-161 (213)
104 3pmo_A UDP-3-O-[3-hydroxymyris 99.3 1E-11 3.5E-16 121.4 11.5 61 301-361 121-185 (372)
105 3r8y_A 2,3,4,5-tetrahydropyrid 99.3 1.5E-11 5.1E-16 113.3 11.5 104 296-413 94-200 (240)
106 3t57_A UDP-N-acetylglucosamine 99.3 2.6E-11 8.8E-16 115.6 13.4 56 298-361 6-61 (305)
107 4fce_A Bifunctional protein GL 99.3 6.7E-12 2.3E-16 126.8 9.1 119 305-442 268-412 (459)
108 1hm9_A GLMU, UDP-N-acetylgluco 99.3 1.6E-11 5.6E-16 124.3 11.7 121 302-442 271-417 (468)
109 3r1w_A Carbonic anhydrase; bet 99.3 3.2E-11 1.1E-15 106.8 12.1 95 323-442 21-137 (189)
110 3gos_A 2,3,4,5-tetrahydropyrid 99.3 1.5E-11 5.3E-16 115.2 9.9 25 337-361 133-157 (276)
111 3fsy_A Tetrahydrodipicolinate 99.3 7.7E-12 2.6E-16 116.1 7.7 51 391-441 208-263 (332)
112 3bfp_A Acetyltransferase; LEFT 99.2 1E-10 3.4E-15 104.0 13.4 80 326-429 94-176 (194)
113 2pig_A Putative transferase; S 99.2 6.1E-11 2.1E-15 113.5 12.5 137 300-441 66-215 (334)
114 2wlg_A Polysialic acid O-acety 99.2 8.3E-11 2.8E-15 106.3 12.5 104 321-442 36-170 (215)
115 3tk8_A 2,3,4,5-tetrahydropyrid 99.2 3.6E-11 1.2E-15 114.2 9.7 39 322-360 152-191 (316)
116 3gos_A 2,3,4,5-tetrahydropyrid 99.2 6.6E-11 2.3E-15 110.9 11.2 23 339-361 129-151 (276)
117 4ea9_A Perosamine N-acetyltran 99.2 5.4E-11 1.8E-15 108.0 10.3 69 337-429 129-198 (220)
118 4ea9_A Perosamine N-acetyltran 99.2 1.5E-10 5.2E-15 105.0 13.2 118 271-406 76-199 (220)
119 3eg4_A 2,3,4,5-tetrahydropyrid 99.2 4.4E-11 1.5E-15 113.3 9.9 110 305-442 129-260 (304)
120 2pig_A Putative transferase; S 99.2 8.3E-11 2.9E-15 112.6 11.9 130 295-429 73-216 (334)
121 2ggo_A 401AA long hypothetical 99.2 1.5E-10 5.2E-15 114.7 12.5 107 298-429 255-389 (401)
122 1qre_A Carbonic anhydrase; bet 99.2 1.2E-10 4E-15 107.6 10.7 96 323-442 61-190 (247)
123 3jqy_B NEUO, polysialic acid O 99.1 2.7E-10 9.2E-15 105.5 12.4 92 321-436 85-206 (252)
124 3bfp_A Acetyltransferase; LEFT 99.1 2.7E-10 9.4E-15 101.2 11.6 119 269-405 50-176 (194)
125 3nz2_A Hexapeptide-repeat cont 99.1 1.4E-10 4.7E-15 103.1 7.2 25 337-361 76-102 (195)
126 3r5d_A Tetrahydrodipicolinate 99.1 4.2E-10 1.4E-14 105.3 10.5 81 321-429 196-287 (347)
127 3c8v_A Putative acetyltransfer 99.1 3E-10 1E-14 114.0 9.9 94 294-406 280-380 (496)
128 3q1x_A Serine acetyltransferas 99.0 2.4E-10 8.2E-15 108.0 7.6 76 337-436 183-266 (313)
129 2wlg_A Polysialic acid O-acety 99.0 1.4E-09 4.8E-14 98.2 11.8 92 322-437 59-181 (215)
130 3ftt_A Putative acetyltransfer 99.0 4.3E-10 1.5E-14 100.3 8.1 77 337-437 74-174 (199)
131 3fsy_A Tetrahydrodipicolinate 99.0 2.7E-09 9.1E-14 99.2 13.5 57 380-438 214-280 (332)
132 3q1x_A Serine acetyltransferas 99.0 5.1E-10 1.8E-14 105.7 8.6 28 380-407 230-258 (313)
133 3nz2_A Hexapeptide-repeat cont 99.0 1.9E-09 6.6E-14 95.7 11.2 55 303-360 60-119 (195)
134 3hjj_A Maltose O-acetyltransfe 99.0 1.5E-09 5.1E-14 96.0 10.2 76 337-436 78-177 (190)
135 4hur_A Virginiamycin A acetylt 99.0 3.4E-10 1.2E-14 102.6 5.7 42 390-437 119-163 (220)
136 1krr_A Galactoside O-acetyltra 99.0 7.7E-10 2.6E-14 98.5 7.5 76 337-436 75-174 (203)
137 3f1x_A Serine acetyltransferas 99.0 9.5E-10 3.3E-14 103.7 7.9 90 321-438 190-296 (310)
138 3st8_A Bifunctional protein GL 99.0 3.9E-09 1.3E-13 107.7 12.8 89 322-435 353-453 (501)
139 2rij_A Putative 2,3,4,5-tetrah 98.9 3.2E-09 1.1E-13 102.3 10.9 24 264-287 166-191 (387)
140 4hur_A Virginiamycin A acetylt 98.9 2.1E-09 7.1E-14 97.4 8.8 29 380-408 120-149 (220)
141 3srt_A Maltose O-acetyltransfe 98.9 4.9E-09 1.7E-13 92.5 11.0 51 303-355 60-114 (188)
142 3srt_A Maltose O-acetyltransfe 98.9 1.9E-09 6.6E-14 95.1 8.1 70 336-429 75-165 (188)
143 3ftt_A Putative acetyltransfer 98.9 4.4E-09 1.5E-13 93.7 10.4 100 303-411 58-163 (199)
144 3hjj_A Maltose O-acetyltransfe 98.9 7.8E-09 2.7E-13 91.4 11.5 98 305-411 64-167 (190)
145 2p2o_A Maltose transacetylase; 98.9 2E-09 6.9E-14 94.6 7.4 79 337-439 74-176 (185)
146 2p2o_A Maltose transacetylase; 98.9 6.5E-09 2.2E-13 91.3 10.5 34 321-354 74-111 (185)
147 1ocx_A Maltose O-acetyltransfe 98.9 3.4E-09 1.2E-13 92.9 7.6 78 337-438 72-173 (182)
148 1ocx_A Maltose O-acetyltransfe 98.9 1E-08 3.5E-13 89.8 10.6 96 305-409 58-159 (182)
149 1krr_A Galactoside O-acetyltra 98.8 1.6E-08 5.4E-13 90.0 10.9 102 303-413 59-166 (203)
150 2rij_A Putative 2,3,4,5-tetrah 98.8 5.5E-09 1.9E-13 100.7 7.7 14 391-404 291-304 (387)
151 3mc4_A WW/RSP5/WWP domain:bact 98.8 5.6E-09 1.9E-13 97.1 7.5 51 380-436 197-259 (287)
152 3r3i_A UTP--glucose-1-phosphat 98.8 6E-08 2E-12 96.6 14.9 357 6-399 125-525 (528)
153 3f1x_A Serine acetyltransferas 98.8 1.1E-08 3.7E-13 96.5 9.1 27 381-407 253-280 (310)
154 1ssq_A SAT, serine acetyltrans 98.8 1.2E-08 4E-13 94.4 8.9 74 339-436 145-232 (267)
155 3mc4_A WW/RSP5/WWP domain:bact 98.8 1.3E-08 4.4E-13 94.7 8.9 27 380-406 223-250 (287)
156 1t3d_A SAT, serine acetyltrans 98.8 1.7E-08 5.8E-13 94.1 8.9 74 339-436 165-252 (289)
157 1ssq_A SAT, serine acetyltrans 98.8 2.6E-08 9E-13 92.0 10.1 28 129-156 19-48 (267)
158 1t3d_A SAT, serine acetyltrans 98.7 4.1E-08 1.4E-12 91.5 10.1 28 129-156 39-68 (289)
159 3brk_X Glucose-1-phosphate ade 98.7 3.1E-08 1E-12 98.7 9.4 70 333-429 320-389 (420)
160 1yp2_A Glucose-1-phosphate ade 98.7 2.7E-08 9.2E-13 100.1 7.1 101 305-429 330-451 (451)
161 4e8l_A Virginiamycin A acetylt 98.6 4.7E-08 1.6E-12 88.0 6.7 43 389-437 117-162 (219)
162 3eev_A Chloramphenicol acetylt 98.6 7.3E-08 2.5E-12 86.6 6.5 90 336-442 17-144 (212)
163 3eev_A Chloramphenicol acetylt 98.5 9.2E-08 3.1E-12 86.0 6.8 42 390-437 111-155 (212)
164 4e8l_A Virginiamycin A acetylt 98.5 2E-07 7E-12 83.8 8.9 32 380-411 119-151 (219)
165 1mr7_A Streptogramin A acetylt 98.5 5.4E-08 1.8E-12 87.1 4.2 42 389-436 112-156 (209)
166 3gue_A UTP-glucose-1-phosphate 98.5 6.7E-06 2.3E-10 81.4 18.5 351 7-393 75-481 (484)
167 1mr7_A Streptogramin A acetylt 98.3 5.3E-07 1.8E-11 80.6 6.3 33 380-412 114-147 (209)
168 1xat_A Xenobiotic acetyltransf 98.3 6.2E-07 2.1E-11 80.2 6.6 92 336-436 55-153 (212)
169 1xat_A Xenobiotic acetyltransf 98.2 3.8E-06 1.3E-10 75.1 9.6 27 380-406 117-144 (212)
170 3ogz_A UDP-sugar pyrophosphory 97.6 0.00057 1.9E-08 69.5 13.4 224 7-239 113-375 (630)
171 2i5e_A Hypothetical protein MM 96.6 0.0017 5.7E-08 57.8 4.6 105 7-150 2-111 (211)
172 3bcv_A Putative glycosyltransf 87.8 3.5 0.00012 36.1 10.4 104 34-160 11-117 (240)
173 1qg8_A Protein (spore coat pol 86.1 10 0.00034 33.4 12.6 108 33-155 6-116 (255)
174 3cgx_A Putative nucleotide-dip 80.9 3.7 0.00013 36.8 7.1 88 41-153 38-129 (242)
175 1xhb_A Polypeptide N-acetylgal 74.4 30 0.001 33.8 12.4 107 32-159 33-146 (472)
176 2d7i_A Polypeptide N-acetylgal 68.6 35 0.0012 34.5 11.5 103 33-157 117-226 (570)
177 2ffu_A Ppgalnact-2, polypeptid 66.6 30 0.001 34.2 10.4 100 33-158 71-177 (501)
178 2z86_A Chondroitin synthase; G 63.4 48 0.0016 33.7 11.5 105 32-158 97-205 (625)
179 2z86_A Chondroitin synthase; G 56.1 70 0.0024 32.4 11.2 101 33-156 380-483 (625)
180 3ckj_A Putative uncharacterize 54.3 68 0.0023 29.5 9.9 109 33-161 53-167 (329)
181 3f1y_A Mannosyl-3-phosphoglyce 41.8 1E+02 0.0035 29.3 9.1 50 108-163 165-217 (387)
182 4fix_A UDP-galactofuranosyl tr 37.6 1.1E+02 0.0038 31.4 9.1 104 33-158 185-299 (657)
183 2xvy_A Chelatase, putative; me 25.6 62 0.0021 28.9 4.3 25 38-63 63-87 (269)
184 4hg6_A Cellulose synthase subu 21.6 3.2E+02 0.011 28.7 9.4 42 108-155 224-266 (802)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=3e-59 Score=474.57 Aligned_cols=430 Identities=58% Similarity=1.037 Sum_probs=343.5
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcc-
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVT- 84 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~- 84 (442)
|++|+|||||||+||||+|||..+||+|+|++|++|||+|++++|.++|+++++|+++++.+++.+++.+.+ +.+..
T Consensus 18 ~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~--~~~~~~ 95 (451)
T 1yp2_A 18 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGG 95 (451)
T ss_dssp HHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHC--C-----
T ss_pred ccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhh--hccccc
Confidence 557999999999999999999999999999999878999999999999999999999999888988887543 11110
Q ss_pred c-CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecCHHHHHHHHHHcCCcEEEEE
Q 013483 85 F-GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 85 ~-~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~~~~~~~~~tl~~ 163 (442)
+ ....++++...+.+ .+..+++|++++|+.++.++... ..++|++++||++++.++.++++.|+++++++|+++
T Consensus 96 ~~~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~~~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~ 170 (451)
T 1yp2_A 96 YKNEGFVEVLAAQQSP--ENPDWFQGTADAVRQYLWLFEEH---TVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAA 170 (451)
T ss_dssp ---CCEEEEEESCSST--TSCCCCCSHHHHHHHTHHHHTTS---CCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccccCcEEEecccccc--cccccccCcHHHHHHHHHHHHhc---CCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEE
Confidence 1 11224555433321 11234579999999999888521 137999999999988899999999999889999988
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+.+..++.+||++..|++++|..|.|||..+....+.++..++..++......++++++|+|+|++++|.+++++.++.
T Consensus 171 ~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~ 250 (451)
T 1yp2_A 171 LPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPG 250 (451)
T ss_dssp EEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTT
T ss_pred EEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhccc
Confidence 87653346789999999889999999999865444444555555433322222357889999999999987777765444
Q ss_pred Ccccccchhhhcccc-cceEEEEecceeeecCChHHHHHHhhhhhcCC-CCccccCCCCcccccCccCCCceecCCceee
Q 013483 244 ANDFGSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKIDDSKIVD 321 (442)
Q Consensus 244 ~~~~~~~~l~~~i~~-~~i~~~~~~g~~~di~t~~~~~~an~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~ 321 (442)
..++.+++++.++++ .+++++.++++|.|++|+++|.+|++.++.+. +...++++.+.+++++.+++++.+.++.|.+
T Consensus 251 ~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I~~ 330 (451)
T 1yp2_A 251 ANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTD 330 (451)
T ss_dssp CCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEEEE
T ss_pred ccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEEeC
Confidence 456667889988876 78999999999999999999999999998876 6677889999999999999999998888889
Q ss_pred eEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECC
Q 013483 322 SIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGK 401 (442)
Q Consensus 322 ~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~ 401 (442)
+.||++|+|+.+.+.+++||++|.|++++.|++++++++.++............+.+.+.||++|+|++|+||++|.||+
T Consensus 331 ~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~~IG~ 410 (451)
T 1yp2_A 331 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNARIGD 410 (451)
T ss_dssp EEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTCEECT
T ss_pred eEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCcEECC
Confidence 99999999997677899999999999999999999999843333322222333333227999999999999999999999
Q ss_pred CeEEccCCCcccceeeCCCeEEccCcEEEcCCcEEcCCccC
Q 013483 402 NVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFVI 442 (442)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~~v~~~~~i 442 (442)
++++.+..++.++.+||++++||+|+++||++++||+||+|
T Consensus 411 ~~~i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 411 NVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp TCEECCSSCCSCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred CCEEeCCcccccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 99999999998888999999999999889999999999986
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.1e-49 Score=396.32 Aligned_cols=363 Identities=36% Similarity=0.613 Sum_probs=287.4
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
|++|+|||||||.|+||+|||..+||+|+|++|++|||+|++++|.++|+++++|+++++.+++.+++.+.+.+ ...+
T Consensus 10 m~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~--~~~~ 87 (420)
T 3brk_X 10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDF--FRPE 87 (420)
T ss_dssp GGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCC--CCGG
T ss_pred hhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhcc--cccc
Confidence 45789999999999999999999999999999986799999999999999999999999888898888764311 1001
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecCHHHHHHHHHHcCCcEEEEEee
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
....+.+++..+.. ....|..|++++|+.++.++... ..++|++++||+++..++.++++.|+++++++|+++.+
T Consensus 88 ~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~l~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~ 162 (420)
T 3brk_X 88 RNESFDILPASQRV--SETQWYEGTADAVYQNIDIIEPY---APEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLE 162 (420)
T ss_dssp GTCEEEEECCC---------CCCCHHHHHHTTHHHHHHH---CCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEE
T ss_pred ccCCEEEeCccccc--cCCccccCCHHHHHHHHHHHHhc---CCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEee
Confidence 11124454433210 00112369999999999888520 13689999999998889999999999988899998887
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC--
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-- 243 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-- 243 (442)
.+..++..||++..|+++++..|.|||..+... .....++++++|+|+|++++|.+++++..+.
T Consensus 163 ~~~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--------------~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~ 228 (420)
T 3brk_X 163 VPRMEATGFGVMHVNEKDEIIDFIEKPADPPGI--------------PGNEGFALASMGIYVFHTKFLMEAVRRDAADPT 228 (420)
T ss_dssp EETTGGGGSEEEEECTTSBEEEEEESCSSCCCB--------------TTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC--
T ss_pred cCccccCcccEEEECCCCcEEEeEeCCCccccc--------------cccccceEEeeeeEEEeHHHHHHHHHHhcccCC
Confidence 654446789999988889999999998643210 0011247889999999999886677653331
Q ss_pred -CcccccchhhhcccccceEEEEe-----------cceeeecCChHHHHHHhhhhhcCCCCccccCCCCcccccCccCCC
Q 013483 244 -ANDFGSEIIPASANEQFLKAYLF-----------NDYWEDIGTIRSFFEANLALTAHPPMFSFYDATKPIYTSRRNLPP 311 (442)
Q Consensus 244 -~~~~~~~~l~~~i~~~~i~~~~~-----------~g~~~di~t~~~~~~an~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (442)
..++..++++.++++++++++.+ +++|.|++|+++|.+|++.++...+...++.+.+.+++.+.+.++
T Consensus 229 ~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~ 308 (420)
T 3brk_X 229 SSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPP 308 (420)
T ss_dssp --------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCC
T ss_pred ccccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCC
Confidence 22455688888888779999999 889999999999999999999877666677777888889999999
Q ss_pred cee-c-----CCceeeeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCC
Q 013483 312 SKI-D-----DSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGEN 385 (442)
Q Consensus 312 ~~i-~-----~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 385 (442)
+.+ + ++.+.++.||++|+|.++.|.+|+||++|.|+++|.|.++++..+ +.||++
T Consensus 309 ~~i~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~-------------------~~i~~~ 369 (420)
T 3brk_X 309 AKFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS-------------------VKIGRH 369 (420)
T ss_dssp CEEECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTT-------------------CEECTT
T ss_pred cEEecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCC-------------------CEECCC
Confidence 999 4 567778999999999777888999999999999999997665444 999999
Q ss_pred cEeeeeEeCCCcEECCCeEEccC
Q 013483 386 TKIKECIIDKNARIGKNVIIANS 408 (442)
Q Consensus 386 ~~i~~~~ig~~~~ig~~~~~~~~ 408 (442)
|.|.+|+||++|.||+++++.+.
T Consensus 370 ~~i~~~~ig~~~~i~~~~~i~~~ 392 (420)
T 3brk_X 370 AQLSNVVIDHGVVIPEGLIVGED 392 (420)
T ss_dssp CEEEEEEECTTCEECTTCEESSC
T ss_pred CEEeceEECCCCEECCCCEEeCC
Confidence 99999999999999999999853
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=8.1e-47 Score=387.61 Aligned_cols=389 Identities=18% Similarity=0.224 Sum_probs=268.8
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
+.++.+||||||+||||+|+| ||+|+||+|+ |||+|+|++|.++|+++|+|+++|+.+++++++.+... .+
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~-----~~ 80 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELAD-----TL 80 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHH-----HH
T ss_pred CCCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHH-----hc
Confidence 456889999999999999976 9999999999 99999999999999999999999999999999975321 11
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeec-CHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~~~~~~~~~tl~~ 163 (442)
+.. ++++ .|. +++||++|++++++++.+ ...+++++++||. ++.. .+.+++++|+..++++|+++
T Consensus 81 ~~~-i~~~--~q~-------~~lGTa~Av~~a~~~l~~---~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 81 GRT-IDVA--LQD-------RPLGTGHAVLCGLSALPD---DYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp TSC-CEEE--ECS-------SCCCHHHHHHHHHTTSCT---TCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCc-EEEE--EcC-------CCCCcHHHHHHHHHHhcc---ccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 111 2222 233 258999999999998864 1246899999998 5544 48899999999999999999
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+.++ +..||.+..|+++++..+.||++.+..+. ..+++++|+|+|++++|..+++.....
T Consensus 148 ~~~~d--p~~yG~i~~~~~g~v~~ivEk~~~~~~~~-----------------~i~~in~Giy~f~~~~l~~~l~~l~~~ 208 (501)
T 3st8_A 148 TTLDD--PFGYGRILRTQDHEVMAIVEQTDATPSQR-----------------EIREVNAGVYAFDIAALRSALSRLSSN 208 (501)
T ss_dssp EECSC--CTTSCEEEECTTCCEEEEECGGGCCHHHH-----------------HCCEEEEEEEEEEHHHHHHHHTTCCCC
T ss_pred eccCC--chhccccccccceeEEeeccccCCChhhc-----------------cceeeeceeeeecchhHHHhhhhhccc
Confidence 98876 78999999999999999999987654211 246889999999999998887764432
Q ss_pred ---Ccccccchhhhccc-ccceEEEEecceeee--cCChHHHHHHhhhhhcCC-------------CCccccCCCCcccc
Q 013483 244 ---ANDFGSEIIPASAN-EQFLKAYLFNDYWED--IGTIRSFFEANLALTAHP-------------PMFSFYDATKPIYT 304 (442)
Q Consensus 244 ---~~~~~~~~l~~~i~-~~~i~~~~~~g~~~d--i~t~~~~~~an~~~l~~~-------------~~~~~~~~~~~~~~ 304 (442)
...+..+++..+.. +..+..+.....|.. +++...+.++...+..+. +....+.+...+..
T Consensus 209 n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~ 288 (501)
T 3st8_A 209 NAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGR 288 (501)
T ss_dssp STTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECT
T ss_pred ccccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECC
Confidence 12223444544444 456777777665544 445555544433322110 11122333344444
Q ss_pred cCccCCCceec-------------CCceeeeEEcCCCEEeceEEeeeEEcCCcEEC------CCCEEeceEEECCccccc
Q 013483 305 SRRNLPPSKID-------------DSKIVDSIISHGSFITSSFIEHSVVGIRSRIN------ANVHLKDTMMLGADFYET 365 (442)
Q Consensus 305 ~~~~~~~~~i~-------------~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~i~------~~~~i~~~~~~~~~~~~~ 365 (442)
++.|++.+.+. ++.+.++.++.++.+..+.+..+.+|+++.|+ +++.|++.+.+|++.++.
T Consensus 289 dv~I~~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik 368 (501)
T 3st8_A 289 DTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVK 368 (501)
T ss_dssp TCEECSSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEE
T ss_pred cceecceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEc
Confidence 44444444442 22222333444433332223333333333333 334444444444322221
Q ss_pred hhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccc-eeeCCCeEEccCcEE-----EcCCcEEcCC
Q 013483 366 DAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEA-DRSAEGFYIRSGVTV-----ILKNSVITDG 439 (442)
Q Consensus 366 ~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~-~~~~~~~~i~~~~~v-----i~~~~~v~~~ 439 (442)
.+..+++ +.|++.++|++|+||+||.||++|++.|++++.++ .+||++++||+++.+ ||++++||+|
T Consensus 369 ----~s~Ig~g---skI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ag 441 (501)
T 3st8_A 369 ----NSTIGTG---TKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAG 441 (501)
T ss_dssp ----SCEECTT---CEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTT
T ss_pred ----cceecCC---cEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCC
Confidence 1223333 78888888899999999999999999999999997 589999999999887 9999999999
Q ss_pred ccC
Q 013483 440 FVI 442 (442)
Q Consensus 440 ~~i 442 (442)
|+|
T Consensus 442 s~v 444 (501)
T 3st8_A 442 TVV 444 (501)
T ss_dssp CEE
T ss_pred CEE
Confidence 985
No 4
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=6.6e-44 Score=363.61 Aligned_cols=383 Identities=21% Similarity=0.277 Sum_probs=269.3
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
.-+|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++++++++|++++..+++.+++.+ +
T Consensus 11 ~~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~------~----- 75 (468)
T 1hm9_A 11 SNFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG------Q----- 75 (468)
T ss_dssp CEEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSS------S-----
T ss_pred CCcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCC------C-----
Confidence 35799999999999984 689999999999 99999999999999999999999887666555421 1
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe--eeecCHHHHHHHHHHcCCcEEEEEee
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
+.++. +. +..|++++++.++.++.. ..++|++++||+ +...++.++++.|++.++++++++.+
T Consensus 76 --i~~v~--~~-------~~~G~~~sl~~a~~~~~~----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~ 140 (468)
T 1hm9_A 76 --TEFVT--QS-------EQLGTGHAVMMTEPILEG----LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAE 140 (468)
T ss_dssp --SEEEE--CS-------SCCCHHHHHHTTHHHHTT----CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --cEEEe--CC-------ccCChHHHHHHHHHHhcc----CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 22222 11 136999999999988852 137899999999 44566899999999888888988877
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC--
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-- 243 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-- 243 (442)
..+ +..|+.+..|+++++..+.|||...... ..+++.++|+|+|++++|.+++++....
T Consensus 141 ~~~--~~~~g~v~~d~~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~ 201 (468)
T 1hm9_A 141 TDN--PFGYGRIVRNDNAEVLRIVEQKDATDFE-----------------KQIKEINTGTYVFDNERLFEALKNINTNNA 201 (468)
T ss_dssp CSC--CTTSCEEEECTTCCEEEEECTTTCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHTTCCSCST
T ss_pred cCC--CCceeEEEECCCCCEEEEEECCCCChHH-----------------hcCeEEEEEEEEEEHHHHHHHHHhhccccC
Confidence 655 5679999888889999999987532110 1246889999999999776666654332
Q ss_pred -Ccccccchhhhcccc-cceEEEEecceeee--cCChHHHHHHhhhhhcCC------CCcc-------ccCCCCccc---
Q 013483 244 -ANDFGSEIIPASANE-QFLKAYLFNDYWED--IGTIRSFFEANLALTAHP------PMFS-------FYDATKPIY--- 303 (442)
Q Consensus 244 -~~~~~~~~l~~~i~~-~~i~~~~~~g~~~d--i~t~~~~~~an~~~l~~~------~~~~-------~~~~~~~~~--- 303 (442)
...+..++++.+++. .++++|.++++|.+ ++|++||.+|+..+..+. .... .+++.+.+.
T Consensus 202 ~~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ 281 (468)
T 1hm9_A 202 QGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEV 281 (468)
T ss_dssp TCSCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTC
T ss_pred CCeEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCC
Confidence 123346788888874 58999999999977 559999999987654321 1111 122222222
Q ss_pred ---------ccCccCCCcee-cCCceeeeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhh--hh
Q 013483 304 ---------TSRRNLPPSKI-DDSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEV--AS 371 (442)
Q Consensus 304 ---------~~~~~~~~~~i-~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~--~~ 371 (442)
+.+.+++++.| .++.|.++.||++|.|+.+.+.+++||++|.|++++.|.+.+++|++..+.+... .+
T Consensus 282 ~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~ 361 (468)
T 1hm9_A 282 QIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGS 361 (468)
T ss_dssp EECSSCEEESSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESC
T ss_pred EECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeee
Confidence 23333333333 3344445556666666544555677777777777777765555555433322110 11
Q ss_pred hhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccc-eeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 372 LLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEA-DRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 372 ~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~-~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
..+++ +.|++.+.+++++||++|.||+++++.+..++.++ ++||+++|||.+++| ||++++||+||+|
T Consensus 362 ~Ig~~---~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s~v 435 (468)
T 1hm9_A 362 SIGEN---TKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTI 435 (468)
T ss_dssp EECTT---CEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSCEECTTCEECTTCEE
T ss_pred EEcCC---cEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCCcEECCCCEECCCCEE
Confidence 11111 33334444466789999999999999887777664 689999999999887 9999999999875
No 5
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=3.5e-44 Score=358.50 Aligned_cols=354 Identities=19% Similarity=0.298 Sum_probs=269.8
Q ss_pred eEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCCc
Q 013483 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (442)
Q Consensus 9 ~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (442)
|+|||||||.|+||+|||..+||+|+|++|+ |||+|++++|.++++++++|+++++ +.+++.+.. .+
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~---~~------ 67 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKL---KE------ 67 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHC---TT------
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccC---Cc------
Confidence 6899999999999999999999999999999 9999999999999999999999866 666665431 11
Q ss_pred eEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeee--cCHHHHHHHHHHcCCcEEEEEeec
Q 013483 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR--MDYMDFVQNHRQSGADITISCLPM 166 (442)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~--~~l~~~l~~~~~~~~~~tl~~~~~ 166 (442)
+.++.... ++.|++++|+.+.+ .++|++++||+++. .++.++++ .++.++++.+.
T Consensus 68 -i~~~~~~~--------~~~g~~~~l~~~~~---------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~ 124 (401)
T 2ggo_A 68 -ISIVTQKD--------DIKGTGAAILSAKF---------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKV 124 (401)
T ss_dssp -CEEEECCT--------TCCBSTTTGGGCCC---------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEEC
T ss_pred -EEEEeCCC--------CCCChHHHHHHhcc---------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEc
Confidence 22332111 13688888877653 27899999999876 34666665 35678888776
Q ss_pred CCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C-
Q 013483 167 DDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A- 244 (442)
Q Consensus 167 ~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-~- 244 (442)
++ +..|+.+..++++++..+.|||..+. ++++++|+|+|++++|. .+++..+. .
T Consensus 125 ~~--~~~~~~v~~~~~g~v~~~~ek~~~~~---------------------~~~~~~Giy~~~~~~~~-~l~~~~~~~~~ 180 (401)
T 2ggo_A 125 SN--PKDYGVLVLDNQNNLSKIIEKPEIPP---------------------SNLINAGIYKLNSDIFT-YLDKISISERG 180 (401)
T ss_dssp SC--CSSSCEEEECTTSSEEEEECSCSSCS---------------------CSEEEEEEEEEETHHHH-HHHHSCCCSSS
T ss_pred CC--CcceeEEEECCCCeEEEEEECCCCCC---------------------CcEEEEEEEEEcHHHHH-HhhhcCcCCCC
Confidence 54 56788888888899999999886432 36889999999999885 45543221 1
Q ss_pred cccccchhhhccc-ccceEEEEecceeeecCChHHHHHHhhhhhcCCCC---ccccCCCCcccccCccCCCcee-cCCce
Q 013483 245 NDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTAHPPM---FSFYDATKPIYTSRRNLPPSKI-DDSKI 319 (442)
Q Consensus 245 ~~~~~~~l~~~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~i-~~~~i 319 (442)
.....++++.+ . +.++..+..+++|.|++||+||.+|++.++.+... ...+++.+.+.+.+.+++.+.+ +++.|
T Consensus 181 ~~~~~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i 259 (401)
T 2ggo_A 181 ELELTDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYI 259 (401)
T ss_dssp CBCHHHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEE
T ss_pred ceEHHHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEE
Confidence 11124677766 4 35899999989999999999999999988765431 1234455555666666666666 45555
Q ss_pred e-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCC
Q 013483 320 V-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKN 396 (442)
Q Consensus 320 ~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~ 396 (442)
. ++.||++|.|+ .+.| .+++||++|.|++++.|+++++..+ +.|++++.|++++||++
T Consensus 260 ~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~-------------------~~i~~~~~i~~~~Ig~~ 320 (401)
T 2ggo_A 260 EGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEG-------------------SKIPHLSYVGDSVIAED 320 (401)
T ss_dssp ESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTT-------------------CEEEESCEEESCEECTT
T ss_pred eCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCC-------------------cEECCCceEcceEECCC
Confidence 4 58888999887 6777 4789999999999999976655444 89999999999999999
Q ss_pred cEECCCeEEccCCC------------------cccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 397 ARIGKNVIIANSEG------------------IQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 397 ~~ig~~~~~~~~~~------------------~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
|.||+++++.+... .....+||+++|||++++| ||++++|++||+|
T Consensus 321 ~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv 389 (401)
T 2ggo_A 321 VNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVV 389 (401)
T ss_dssp CEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEECCCCeE
Confidence 99999999984211 1135689999999999887 8999999998874
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=6.6e-44 Score=362.71 Aligned_cols=381 Identities=16% Similarity=0.221 Sum_probs=258.0
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
++|.|||||||.|+||+| .+||+|+|++|+ |||+|+++.|.++++++++|++++..+++.+++.+. +
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~-----~---- 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP-----S---- 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC-----C----
Confidence 479999999999999995 789999999999 999999999999999999999998877777776431 1
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe--eeecCHHHHHHHHHHcCCcEEEEEe
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCL 164 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~~~~~~~~~tl~~~ 164 (442)
++++. +. +..|++++++.+++++.. .++|++++||+ +....+.++++.|++ .++++++.
T Consensus 74 ---~~~v~--~~-------~~~g~~~~i~~~~~~~~~-----~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 134 (459)
T 4fce_A 74 ---LNWVL--QA-------EQLGTGHAMQQAAPHFAD-----DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTV 134 (459)
T ss_dssp ----CEEE--CS-------SCCCHHHHHHHHGGGSCT-----TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEe--CC-------CCCCcHHHHHHHHHhcCC-----CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEE
Confidence 22222 11 136999999999988863 47999999999 444568899988764 55677776
Q ss_pred ecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-
Q 013483 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT- 243 (442)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~- 243 (442)
+..+ +..|+.+..| ++++..+.||+...... ..++++++|+|+|+++.|.++++.....
T Consensus 135 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 194 (459)
T 4fce_A 135 KLDN--PSGYGRIVRE-NGDVVGIVEHKDASDAQ-----------------REINEINTGILVANGRDLKRWLSLLDNNN 194 (459)
T ss_dssp ECSC--CTTSCEEEEE-TTEEEEEECGGGCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHHTCCCCS
T ss_pred ecCC--CCcccEEEeC-CCcEEEEEECCCCChHH-----------------hhccEEEEEEEEEEHHHHHHHHHHhCccc
Confidence 6654 5779988887 78999999986532210 1346889999999999887777654221
Q ss_pred --Ccccccchhhhcccc-cceEEEEeccee--eecCChHHHHHHhhhhhcCC------CCccc-------cCCCCccccc
Q 013483 244 --ANDFGSEIIPASANE-QFLKAYLFNDYW--EDIGTIRSFFEANLALTAHP------PMFSF-------YDATKPIYTS 305 (442)
Q Consensus 244 --~~~~~~~~l~~~i~~-~~i~~~~~~g~~--~di~t~~~~~~an~~~l~~~------~~~~~-------~~~~~~~~~~ 305 (442)
...+..+.++.+++. .+++++..+++| ++++||+||..|+..+..+. ..... +++.+.+..+
T Consensus 195 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~ 274 (459)
T 4fce_A 195 AQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRD 274 (459)
T ss_dssp TTCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSS
T ss_pred cCCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCC
Confidence 222345677777664 689999998765 67999999999987664331 01111 1111222222
Q ss_pred CccCCC------------cee-cCCceeeeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhh--
Q 013483 306 RRNLPP------------SKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEV-- 369 (442)
Q Consensus 306 ~~~~~~------------~~i-~~~~i~~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~-- 369 (442)
+.|++. +.| .++.|.++.||++|.|+ ++.+.+++||++|.|++++.|...+.+|++..+.+...
T Consensus 275 ~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~ 354 (459)
T 4fce_A 275 ITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIK 354 (459)
T ss_dssp CEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred cEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEe
Confidence 223322 222 23333344455555554 44444445555555554444443333343322222100
Q ss_pred hhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccc-eeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 370 ASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEA-DRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~-~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
.+...++ +.|++.+++++++||++|.||+++++.+..++.++ ++||+++|||.+++| ||++++||+||+|
T Consensus 355 ~~~i~~~---~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV 430 (459)
T 4fce_A 355 KARLGKG---SKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTV 430 (459)
T ss_dssp EEEECTT---CEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred eeEEcCC---CEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEE
Confidence 1111111 34444555567899999999999999998888886 699999999999987 9999999999875
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=4e-42 Score=349.30 Aligned_cols=380 Identities=18% Similarity=0.253 Sum_probs=263.4
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
+++.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++++++++|++++..+++.+++.+. +
T Consensus 4 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~-----~---- 70 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE-----Q---- 70 (456)
T ss_dssp CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC-----C----
T ss_pred CcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC-----C----
Confidence 568999999999999984 689999999999 999999999999999999999998777777665321 1
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe--eeecCHHHHHHHHHHcCCcEEEEEe
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCL 164 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~~~~~~~~~tl~~~ 164 (442)
++++. +. .+.|++++++.+++++.. .++|++++||+ +...++.++++.|++ +++++++.
T Consensus 71 ---~~~v~--~~-------~~~g~~~~~~~~~~~~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 131 (456)
T 2v0h_A 71 ---VNWVL--QT-------EQLGTAHAVQQAAPFFKD-----NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTV 131 (456)
T ss_dssp ---CEEEE--CS-------CCCCHHHHHHHHGGGCCT-----TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEe--CC-------CCCCcHHHHHHHHHhcCC-----CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEe
Confidence 22222 11 136999999999988853 37999999999 344568899988865 56777777
Q ss_pred ecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-
Q 013483 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT- 243 (442)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~- 243 (442)
+..+ +..|+.+..| ++++..+.||+...... ..++++++|+|+|+++.|.++++.....
T Consensus 132 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 191 (456)
T 2v0h_A 132 NLDN--PTGYGRIIRE-NGNVVAIVEQKDANAEQ-----------------LNIKEVNTGVMVSDGASFKKWLARVGNNN 191 (456)
T ss_dssp ECSS--CTTSCEEEEE-TTEEEEEECTTTCCHHH-----------------HTCCEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ecCC--CCccceEEEc-CCcEEEEEECCCCChhH-----------------hcCcEEEEEEEEEEHHHHHHHHHHhcccc
Confidence 6654 5678888887 78999999987632210 0236789999999999776676653322
Q ss_pred --Ccccccchhhhcccc-cceEEEEecce--eeecCChHHHHHHhhhhhcCC------CCccccCC-CCcccccCccCCC
Q 013483 244 --ANDFGSEIIPASANE-QFLKAYLFNDY--WEDIGTIRSFFEANLALTAHP------PMFSFYDA-TKPIYTSRRNLPP 311 (442)
Q Consensus 244 --~~~~~~~~l~~~i~~-~~i~~~~~~g~--~~di~t~~~~~~an~~~l~~~------~~~~~~~~-~~~~~~~~~~~~~ 311 (442)
...+..++++.++.. .++..+..+++ |++++||+||.+|++.+..+. ......++ ...+.+++.+++.
T Consensus 192 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~ 271 (456)
T 2v0h_A 192 AQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKD 271 (456)
T ss_dssp TTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSS
T ss_pred ccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCC
Confidence 122336777776664 57889988654 579999999999998765431 11222333 2344455555555
Q ss_pred cee-cCCcee-eeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhh---hhhhcCCCcceEeCC-
Q 013483 312 SKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEV---ASLLAEGRVPVGIGE- 384 (442)
Q Consensus 312 ~~i-~~~~i~-~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~- 384 (442)
+.| +++.|. ++.||++|.|+ ++.|.+++||++|.|++++.|.+ +.+|+++.+.+... ....+++ +.||+
T Consensus 272 ~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~-~~ig~~~~I~~~~~i~~~~~ig~~---~~ig~~ 347 (456)
T 2v0h_A 272 VEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLED-SIVGEKAAIGPFSRLRPGAELAAE---THVGNF 347 (456)
T ss_dssp CEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEE-EEECTTCEECSSEEECTTCEECTT---CEEEEE
T ss_pred CEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEcc-CcCCCCcEECCccEECCCCEECCC---CEECCC
Confidence 555 344442 56777777777 66666777777777777666643 23344333222110 0000000 22222
Q ss_pred ----------Cc------EeeeeEeCCCcEECCCeEEccCCCccc-ceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 385 ----------NT------KIKECIIDKNARIGKNVIIANSEGIQE-ADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 385 ----------~~------~i~~~~ig~~~~ig~~~~~~~~~~~~~-~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
++ ++++++||++|.||+++++.+..+..+ ..+||+++|||++++| ||++++||+||+|
T Consensus 348 ~~i~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v 427 (456)
T 2v0h_A 348 VEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTI 427 (456)
T ss_dssp EEEESCEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEE
T ss_pred CEEeccEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEE
Confidence 22 223468899999999999988777666 4689999999999887 8999999999875
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=3.7e-35 Score=278.97 Aligned_cols=244 Identities=20% Similarity=0.278 Sum_probs=193.6
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcc---
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVT--- 84 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~--- 84 (442)
.|+|||||||.||||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++.+.+.+.....
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 80 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN 80 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CC
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhccc
Confidence 58999999999999999999999999999999 99999999999999999999999998899888754321111000
Q ss_pred ------------cCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-----HHH
Q 013483 85 ------------FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-----YMD 147 (442)
Q Consensus 85 ------------~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-----l~~ 147 (442)
++ +.+....+.. +.|++++++.++.++. .++|+|++||++++.+ +.+
T Consensus 81 ~~~~~~~~~~~~~~---~~i~~~~~~~-------~~Gt~~al~~a~~~l~------~~~~lv~~~D~~~~~~~~~~~l~~ 144 (281)
T 3juk_A 81 KENALKSIRNIIEK---CCFSYVRQKQ-------MKGLGHAILTGEALIG------NEPFAVILADDLCISHDHPSVLKQ 144 (281)
T ss_dssp HHHHHHHHHHHHHH---CEEEEEECSS-------CCCHHHHHHHTHHHHC------SSCEEEECTTEEEECTTSCCHHHH
T ss_pred chhhhhhhhccccC---ccEEEEecCC-------CCCcHHHHHHHHHHcC------CCCEEEEeCCeeccCccchHHHHH
Confidence 11 2222222321 4799999999999986 3799999999999988 999
Q ss_pred HHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcC--CC--ceEEEEeCCCcccccccccccccccccccccccccceeee
Q 013483 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (442)
Q Consensus 148 ~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~--~~--~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (442)
+++.|+++++ .++.+...+..++..||++..|+ ++ +|..+.|||..... .++++++
T Consensus 145 l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~ 204 (281)
T 3juk_A 145 MTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVI 204 (281)
T ss_dssp HHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEE
Confidence 9999988877 67777766555578999998876 77 99999999974221 2468899
Q ss_pred eEEEEeHHHHHHHHhhhCCC--CcccccchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhcC
Q 013483 224 GVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 224 Giy~~~~~~l~~~l~~~~~~--~~~~~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~ 289 (442)
|+|+|++++|. .+++..+. ......++++.++.++++++|.++++|.|||||++|.+|++.++..
T Consensus 205 GiYi~~~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 205 GRYILTPDIFE-ILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp EEEEECTTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHH-HHHhcCCCCCCceeHHHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99999999985 55553221 1111267888888878999999999999999999999999998754
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=5.3e-33 Score=262.31 Aligned_cols=236 Identities=22% Similarity=0.379 Sum_probs=190.7
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccCh-hhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~~~ 85 (442)
++|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++.. +++.+++... ..+
T Consensus 23 ~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~------~~~ 95 (269)
T 4ecm_A 23 NAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSG------QEF 95 (269)
T ss_dssp -CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTS------GGG
T ss_pred cCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhc------ccc
Confidence 468999999999999999999999999999999 99999999999999999999999764 6777776432 223
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecCHHHHHHHHHHcCCcEEEEEee
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
+.. +.+. .+.. +.|++++|+.+..++. .++|++++||+++..++.++++.|+++++++++++.+
T Consensus 96 ~~~-i~~~--~~~~-------~~G~~~al~~a~~~~~------~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~ 159 (269)
T 4ecm_A 96 GVS-FTYR--VQDK-------AGGIAQALGLCEDFVG------NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQS 159 (269)
T ss_dssp TCE-EEEE--ECSS-------CCCHHHHHHTTHHHHT------TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEE
T ss_pred Cce-EEEe--eCCc-------cCcHHHHHHHHHHhcC------CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEE
Confidence 221 2222 2221 3699999999998886 3899999999999888999999999888899999888
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (442)
.++ +..||++..| +++|..+.|||..+. ++++++|+|+|++++|. .+++..+. .
T Consensus 160 ~~~--~~~~g~v~~d-~g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~~ 214 (269)
T 4ecm_A 160 VDD--PERFGVANIQ-NRKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSAR 214 (269)
T ss_dssp CSC--GGGSEEEEEE-TTEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCTT
T ss_pred CCC--CCCceEEEEc-CCEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCCC
Confidence 765 6789998887 589999999986432 36789999999999884 55543221 1
Q ss_pred ccc-ccchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhcCC
Q 013483 245 NDF-GSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (442)
Q Consensus 245 ~~~-~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~~ 290 (442)
..+ ..++++.+++.+++.++..+++|.||+||++|.+|++.+++..
T Consensus 215 ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 215 GELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp SCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred CeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 122 3678888888778999999999999999999999999987554
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=2e-32 Score=262.74 Aligned_cols=250 Identities=21% Similarity=0.319 Sum_probs=187.6
Q ss_pred CCcccccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCC
Q 013483 1 MEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYG 80 (442)
Q Consensus 1 ~~~~~~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~ 80 (442)
|...+++.|+|||||||.||||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++...+.+.
T Consensus 1 ~~~~~~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~ 79 (302)
T 2e3d_A 1 MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELE 79 (302)
T ss_dssp ----CCSCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHH
T ss_pred CcchhhcccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhh
Confidence 444455679999999999999999999999999999999 9999999999999999999999988888888875421000
Q ss_pred -----C-Cc----------ccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeec-
Q 013483 81 -----S-GV----------TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM- 143 (442)
Q Consensus 81 -----~-~~----------~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~- 143 (442)
. +. .++. .+.++ .+. ++.|++++++.++.++. .++|+|++||++++.
T Consensus 80 ~~l~~~~~~~~l~~~~~~~~~~~-~i~~~--~~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~ 143 (302)
T 2e3d_A 80 AMLEKRVKRQLLDEVQSICPPHV-TIMQV--RQG-------LAKGLGHAVLCAHPVVG------DEPVAVILPDVILDEY 143 (302)
T ss_dssp HHHC----CHHHHHHHHTSCTTC-EEEEE--ECS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEECTT
T ss_pred hhhhhccchhhhhhhhhccccCc-ceEEe--eCC-------ccCCHHHHHHHHHHHcC------CCcEEEEcCCccccCc
Confidence 0 00 0011 12222 222 13799999999999886 379999999998862
Q ss_pred -------CHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEc----CCC---ceEEEEeCCCcccccccccccccccc
Q 013483 144 -------DYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN----NEG---RVLSFSEKPKGKDLKAMAVDTTVLGL 209 (442)
Q Consensus 144 -------~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d----~~~---~v~~i~ek~~~~~~~~~~~~~~~~~~ 209 (442)
++.++++.|++.++ .++.+.+.++ +..||++..+ +++ +|..|.|||.....
T Consensus 144 ~~~~~~~~l~~l~~~~~~~~~-~~i~~~~~~~--~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~------------ 208 (302)
T 2e3d_A 144 ESDLSQDNLAEMIRRFDETGH-SQIMVEPVAD--VTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA------------ 208 (302)
T ss_dssp SSCTTTSTHHHHHHHHHHHCC-EEEEEEECSC--GGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC------------
T ss_pred cccchHHHHHHHHHHHHhcCC-cEEEEEEccC--CCCccEEEecccccCCCCceeEEEEEECCCCCcc------------
Confidence 68999999988776 7777776643 6789988763 456 89999999863221
Q ss_pred cccccccccceeeeeEEEEeHHHHHHHHhhhCCC--CcccccchhhhcccccceEEEEecceeeecCChHHHHHHhhhhh
Q 013483 210 SKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 210 ~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~--~~~~~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l 287 (442)
.++++++|+|+|++++|. .+++..+. ......++++.+++.+++.++.++++|.|+|||++|.+|++.++
T Consensus 209 -------~~~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~ 280 (302)
T 2e3d_A 209 -------PSNLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYG 280 (302)
T ss_dssp -------SCSEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHH
T ss_pred -------ccceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHH
Confidence 246889999999999884 55543332 11223577888777669999999999999999999999997775
Q ss_pred cCC
Q 013483 288 AHP 290 (442)
Q Consensus 288 ~~~ 290 (442)
...
T Consensus 281 ~~~ 283 (302)
T 2e3d_A 281 IRH 283 (302)
T ss_dssp HHC
T ss_pred hcC
Confidence 443
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=5.4e-32 Score=259.15 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=171.7
Q ss_pred cccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccC-----
Q 013483 5 DARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNY----- 79 (442)
Q Consensus 5 ~~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~----- 79 (442)
....|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++...+.+
T Consensus 11 ~~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~ 89 (297)
T 2ux8_A 11 IKPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMA 89 (297)
T ss_dssp CCCCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHH
T ss_pred ccCccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhh
Confidence 35678999999999999999999999999999999 999999999999999999999998888888887532100
Q ss_pred CCC---------cccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeee---cCHHH
Q 013483 80 GSG---------VTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR---MDYMD 147 (442)
Q Consensus 80 ~~~---------~~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~---~~l~~ 147 (442)
..+ ...+. .+.++. +. ++.|++++++.++.++. .++|+|++||++++ .++.+
T Consensus 90 ~~~~~~~~~~~~~~~g~-~i~~~~--~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~l~~ 153 (297)
T 2ux8_A 90 ARGKSLDVLDGTRLKPG-NIAYVR--QQ-------EPMGLGHAVWCARDIVG------DEPFAVLLPDDFMFGQPGCLKQ 153 (297)
T ss_dssp TTTCCGGGGTTSCCSTT-SEEEEE--CC-------SCCCHHHHHHTTHHHHC------SSCEEEECTTEEEESSSCHHHH
T ss_pred hccchhhhhhhcccCCC-ceEEEe--CC-------CCCChHHHHHHHHHHcC------CCcEEEEeCCeecCCChHHHHH
Confidence 000 00111 133322 21 13799999999998886 37999999999887 45899
Q ss_pred HHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcC--CC--ceEEEEeCCCcccccccccccccccccccccccccceeee
Q 013483 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (442)
Q Consensus 148 ~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~--~~--~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (442)
+++.|++.++ .++.+.+.+..++..||++..|+ ++ +|..|.|||..... .++++++
T Consensus 154 l~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~ 213 (297)
T 2ux8_A 154 MVDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVI 213 (297)
T ss_dssp HHHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEE
T ss_pred HHHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEE
Confidence 9999987765 57766665433467798887653 45 89999998853211 2367899
Q ss_pred eEEEEeHHHHHHHHhhhCCC--CcccccchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhcCC
Q 013483 224 GVYLFKKEILLNLLRWRFPT--ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (442)
Q Consensus 224 Giy~~~~~~l~~~l~~~~~~--~~~~~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~~ 290 (442)
|+|+|++++|. .+++..+. ......++++.++++.+++++.++++|.|||||++|.+|++.++...
T Consensus 214 Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~ 281 (297)
T 2ux8_A 214 GRYILQPEVMR-ILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSR 281 (297)
T ss_dssp EEEEECTHHHH-HHHHTC--------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHC
T ss_pred EEEEECHHHHH-HHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcC
Confidence 99999999874 55554332 11123678888887779999999999999999999999998876543
No 12
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.98 E-value=2.1e-31 Score=250.00 Aligned_cols=245 Identities=25% Similarity=0.334 Sum_probs=177.9
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc--
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF-- 85 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~-- 85 (442)
+|+|||||||.||||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++.+...+..+..+
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 58999999999999999999999999999999 999999999999999999999999888888888653200001111
Q ss_pred CCceEEEecccccCCc---CCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecCHHHHHHHHHHcCCcEEEE
Q 013483 86 GDGCVEVLAATQTPGE---AGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITIS 162 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~---~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~~~~~~~~~tl~ 162 (442)
....++++.....+.. ..+..+.|++++++.++.++.. .++|++++||+++..++.++++.|+++++.+|+.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~-----~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~ 155 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKD-----DEAFLFTYGDGVADLDIKATIDFHKAHGKKATLT 155 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTT-----SSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEE
T ss_pred cccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCC-----CCcEEEEECCEecccCHHHHHHHHHHhCCeEEEE
Confidence 0001222210000000 0001136999999999988842 3789999999998889999999998888887775
Q ss_pred EeecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 013483 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (442)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~ 242 (442)
..+ . +..||++..| +++|..|.|||... .+++++|+|+|++++|. .+++
T Consensus 156 ~~~--~--~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~--- 204 (259)
T 1tzf_A 156 ATF--P--PGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN--- 204 (259)
T ss_dssp EEC--C--CCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---
T ss_pred Eec--C--CCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---
Confidence 432 2 5679988887 78999999988642 25789999999999873 3322
Q ss_pred CCcccccchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhcC
Q 013483 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 243 ~~~~~~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~ 289 (442)
....+..+.++.+++++++.++..+++|.|++|++||.++++.+...
T Consensus 205 ~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~ 251 (259)
T 1tzf_A 205 DATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKG 251 (259)
T ss_dssp TTCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHTT
T ss_pred cccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhcC
Confidence 12234467888888777899999999999999999999999988753
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=5.2e-31 Score=255.05 Aligned_cols=248 Identities=20% Similarity=0.265 Sum_probs=185.3
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCC------
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYG------ 80 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~------ 80 (442)
+.|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++...+.|.
T Consensus 11 ~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 11 AVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp -CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred cceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 458999999999999999999999999999999 9999999999999999999999998888887764311000
Q ss_pred ---------CCcccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeee--cCHHHHH
Q 013483 81 ---------SGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYR--MDYMDFV 149 (442)
Q Consensus 81 ---------~~~~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~--~~l~~~l 149 (442)
....++. .+.++. +.. +.|++++++.++.++.. ..+.|+|++||++++ .++.+++
T Consensus 90 ~~~~~~~~~~~~~~g~-~i~~~~--~~~-------~~Gt~~al~~a~~~l~~----~~d~~lv~~~D~~~~~~~~l~~l~ 155 (323)
T 2pa4_A 90 GKTDQVEIIRRAADLI-KAVPVT--QDK-------PLGLGHAVGLAESVLDD----DEDVVAVMLPDDLVLPTGVMERMA 155 (323)
T ss_dssp TCHHHHHHTTHHHHHC-EEEEEE--CSS-------CCCHHHHHHTTGGGSCS----SCCEEEEECTTEEEESSCHHHHHH
T ss_pred chhhhhhhhhccccCc-ceEEEe--CCc-------cCCcHHHHHHHHHHhcC----CCCeEEEEeCCcccCchHHHHHHH
Confidence 0000111 122222 221 36999999999988752 013399999999886 4589999
Q ss_pred HHHHHcCCcEEEEEeecCCCcCCcccEEEEc----CCC--ceEEEEeCCCcccccccccccccccccccccccccceeee
Q 013483 150 QNHRQSGADITISCLPMDDSRASDFGLMKIN----NEG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASM 223 (442)
Q Consensus 150 ~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d----~~~--~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (442)
+.|++.++ .++.+.+.+..++..||++..| +++ +|..|.|||..... .+++.++
T Consensus 156 ~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~~ 215 (323)
T 2pa4_A 156 QVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAAT 215 (323)
T ss_dssp HHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEEE
Confidence 99987665 5677666654446789998876 454 89999999853221 2467899
Q ss_pred eEEEEeHHHHHHHHhhhCCCC-ccc-ccchhhhcccc-cceEEEEecceeeecCChHHHHHHhhhhhcCC
Q 013483 224 GVYLFKKEILLNLLRWRFPTA-NDF-GSEIIPASANE-QFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (442)
Q Consensus 224 Giy~~~~~~l~~~l~~~~~~~-~~~-~~~~l~~~i~~-~~i~~~~~~g~~~di~t~~~~~~an~~~l~~~ 290 (442)
|+|+|++++|. .+++..+.. ..+ ..++++.+++. .++.++.++++|.|||||++|.+|++.++...
T Consensus 216 GiY~~~~~~~~-~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~ 284 (323)
T 2pa4_A 216 GRYLLDRKIFD-ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSH 284 (323)
T ss_dssp EEEEEETHHHH-HHHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTC
T ss_pred EEEEECHHHHH-HHHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcC
Confidence 99999999885 555533321 112 25778888775 78999999999999999999999998887544
No 14
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.97 E-value=2.3e-30 Score=246.69 Aligned_cols=233 Identities=23% Similarity=0.411 Sum_probs=181.7
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEec-cChhhHHHHHHhhccCCCCcccC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~-~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
+|++||||||.||||+|+|..+||+|+|++|+ |||+|+++.|..+|+++|+|++. +..+.+.+++.+ +.+++
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 74 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGD------GSNWG 74 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhc------ccccC
Confidence 58999999999999999999999999999999 99999999999999999998885 455677777643 22233
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeee-ecCHHHHHHHHHHcCCcEEEEEee
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~-~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
.. +.+. .+.. +.|++++++.+.+++.. ++++++.||.++ +.++.++++.|.+.+.++++++.+
T Consensus 75 ~~-i~~~--~~~~-------~~G~~~al~~a~~~i~~------~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 138 (293)
T 1fxo_A 75 LD-LQYA--VQPS-------PDGLAQAFLIGESFIGN------DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYH 138 (293)
T ss_dssp CE-EEEE--ECSS-------CCCGGGHHHHTHHHHTT------SEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEe--eCCC-------CCCHHHHHHHHHHHhCC------CCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEE
Confidence 21 2222 2321 36999999999988863 789999999954 567999999998777778887777
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (442)
..+ +..||++..|+++++.+|.|||..+. ++++++|+|+|+++++. .+++..+. .
T Consensus 139 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~-~~~~~~~~~~ 194 (293)
T 1fxo_A 139 VLD--PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVD-IARDLKPSPR 194 (293)
T ss_dssp CSC--GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHH-HHHHCCCCTT
T ss_pred CCC--cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHH-HHHhcCcccC
Confidence 665 56899999998999999999986432 36789999999999885 44443332 1
Q ss_pred ccc-ccchhhhcccccceEEEEec-ce-eeecCChHHHHHHhhhhh
Q 013483 245 NDF-GSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (442)
Q Consensus 245 ~~~-~~~~l~~~i~~~~i~~~~~~-g~-~~di~t~~~~~~an~~~l 287 (442)
..+ ..++++.+++.+.+.++... ++ |.|++|++||.+|+..+.
T Consensus 195 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 195 GELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 222 25677777777777777775 74 999999999999998765
No 15
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.97 E-value=1.2e-30 Score=250.18 Aligned_cols=256 Identities=13% Similarity=0.129 Sum_probs=185.6
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceee--cCccceehhhhhhhhhcCCcEEEEEeccCh-hhHHHHHHhhccCCCC
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPI--GGAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSG 82 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi--~g~~pli~~~l~~l~~~gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~ 82 (442)
|++|++||||||.|+||+| ||+|+|+ +|+ |||+|+++++.++|+++|+|++++.. +.+.+++...+.+..+
T Consensus 3 ~m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 3 AMKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHTTTSC
T ss_pred CCceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhccCCc
Confidence 5678999999999999997 7999999 589 99999999999999999999999985 7888888765432111
Q ss_pred cccCCceEEEeccccc------CCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHH-
Q 013483 83 VTFGDGCVEVLAATQT------PGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQ- 154 (442)
Q Consensus 83 ~~~~~~~v~i~~~~~~------~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~- 154 (442)
+..+..... .....+..++||++||++++++++ ++|+|++||++++.+ +.+++++|.+
T Consensus 77 -------i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~-------~~~lV~~gD~l~~~~~~~~l~~~~~~~ 142 (303)
T 3pnn_A 77 -------VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR-------EPFAVINADDFYGRNGFEVLARKLMTL 142 (303)
T ss_dssp -------EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC-------SCEEEEESSCBCCHHHHHHHHHHHHTT
T ss_pred -------EEEEecccccccccccccccccccCCcHHHHHHHHHhcC-------CCEEEEECCeecCHHHHHHHHHHHHHh
Confidence 222211100 000001135899999999998884 799999999998876 8999999976
Q ss_pred --cCCcEEEEEeecCCCcCCcc-----cEEEEcCCCceEEEEeCCCccccccccccccccccccc---ccccccceeeee
Q 013483 155 --SGADITISCLPMDDSRASDF-----GLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQ---EAEEKPYIASMG 224 (442)
Q Consensus 155 --~~~~~tl~~~~~~~~~~~~~-----g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~G 224 (442)
+++++++++.+..++ ...| |.+..|++|+|+.|.|||........ ......+ .....++++++|
T Consensus 143 ~~~~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~-----~~~~~~~g~~~~~~~~~~i~~G 216 (303)
T 3pnn_A 143 EGKQGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGT-----ISFRDETGKICTLAEDAPVSMN 216 (303)
T ss_dssp TTCSSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTE-----EEEECTTSCEEEECTTCEEEEE
T ss_pred ccccCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCcccccc-----ccccccccccccCCCCCEEEEE
Confidence 567889888877652 1455 57888888999999999975311000 0000000 000135788999
Q ss_pred EEEEeHHHHHHHHhh--------hCCC--Ccccccchhhhccccc--ceEEEEecceeeecCChHHHHHHhhhhhc
Q 013483 225 VYLFKKEILLNLLRW--------RFPT--ANDFGSEIIPASANEQ--FLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (442)
Q Consensus 225 iy~~~~~~l~~~l~~--------~~~~--~~~~~~~~l~~~i~~~--~i~~~~~~g~~~di~t~~~~~~an~~~l~ 288 (442)
+|+|++++|..+ +. ..+. ...+..++++.+++++ ++.+|.++++|.|+|||++|.+|++.+..
T Consensus 217 iY~f~~~~~~~l-~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 217 MWGFTPDYFDYS-EELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp EEEECTHHHHHH-HHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred EEEECHHHHHHH-HHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 999999998544 32 1111 2223467888888765 79999999999999999999999998764
No 16
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.97 E-value=1.1e-30 Score=244.02 Aligned_cols=230 Identities=12% Similarity=0.095 Sum_probs=168.9
Q ss_pred EEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhh-cCCcEEEEEeccChhhHHHHHHhhccCCCCcccCCce
Q 013483 11 AVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCIN-SGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGC 89 (442)
Q Consensus 11 aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~-~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 89 (442)
+||||||.||||+|+|..+||+|+||+|+ |||+|+|++|.+ +|+++++|++++..+ +.+++.+... +++...
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~-----~~~~~~ 74 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKAT-----QLGIKQ 74 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHH-----HHTCSS
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHH-----HcCCCC
Confidence 79999999999999999999999999999 999999999999 799999999998765 5556544321 111111
Q ss_pred EEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeee-ecCHHHHHHHHHHcCCcEEEEEeecCC
Q 013483 90 VEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLPMDD 168 (442)
Q Consensus 90 v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~-~~~l~~~l~~~~~~~~~~tl~~~~~~~ 168 (442)
+.+... +. +++||++|++.+...+.......+++|+|++||+++ +.++.++ .++++.++++.+.++
T Consensus 75 ~~~~~~-~~-------~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~ 141 (255)
T 4evw_A 75 FYIAEL-HT-------ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGG 141 (255)
T ss_dssp EEEEEE-SS-------CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCS
T ss_pred ceEEEe-CC-------CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCC
Confidence 111111 21 147999999999999820000014789999999988 4555442 246678888888764
Q ss_pred CcCCcccEEEEcCCC--ceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHH-HHHHHHhhh----C
Q 013483 169 SRASDFGLMKINNEG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKE-ILLNLLRWR----F 241 (442)
Q Consensus 169 ~~~~~~g~v~~d~~~--~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~-~l~~~l~~~----~ 241 (442)
+ .||++..|++| +|+++.||+.. ++++++|+|+|++. +|.+.+.+. .
T Consensus 142 --p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~~ 195 (255)
T 4evw_A 142 --D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVARPS 195 (255)
T ss_dssp --S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTSCG
T ss_pred --C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhccc
Confidence 3 89999998888 99999999432 36789999999985 343333321 1
Q ss_pred C---CCcccccchhhhcccc-cceEEEEec-ceeeecCChHHHHHHhhhh
Q 013483 242 P---TANDFGSEIIPASANE-QFLKAYLFN-DYWEDIGTIRSFFEANLAL 286 (442)
Q Consensus 242 ~---~~~~~~~~~l~~~i~~-~~i~~~~~~-g~~~di~t~~~~~~an~~~ 286 (442)
+ ....+..|+++.+++. .++.++.++ ++|.|+|||++|.++.+.-
T Consensus 196 ~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~~ 245 (255)
T 4evw_A 196 QEWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQP 245 (255)
T ss_dssp GGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC-
T ss_pred ccccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhcC
Confidence 1 2233446888888864 579999885 9999999999999997654
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=5.1e-30 Score=244.30 Aligned_cols=233 Identities=24% Similarity=0.414 Sum_probs=180.8
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEec-cChhhHHHHHHhhccCCCCcccC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~-~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
.|++||||||.||||+|+|..+||+|+|++|+ |||+|+++.|..+|+++|+|+++ +..+.+.+++.+ +.+++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~------g~~~g 75 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGD------GSQFG 75 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhh------ccccC
Confidence 48999999999999999999999999999999 99999999999999999999886 555677777643 22233
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCee-eecCHHHHHHHHHHcCCcEEEEEee
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i-~~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
.. +.+. .+.. +.|++++++.+.+++.+ ++++++.||.+ .+.++.++++.|.+.+..+++++.+
T Consensus 76 ~~-i~~~--~~~~-------~~G~~~al~~a~~~i~~------~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (295)
T 1lvw_A 76 VR-FSYR--VQEE-------PRGIADAFIVGKDFIGD------SKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYY 139 (295)
T ss_dssp SE-EEEE--ECSS-------CCCGGGHHHHTHHHHTT------SCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEe--eCCC-------CCChHHHHHHHHHHhCC------CcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEE
Confidence 21 2222 2221 36999999999998863 68888889995 4667999999998777778887777
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (442)
..+ +..||++..|+++++.+|.|||..+. +++.++|+|+|+++++. .+++..+. .
T Consensus 140 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~-~~~~~~~~~~ 195 (295)
T 1lvw_A 140 VRD--PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVE-IARRIEPSDR 195 (295)
T ss_dssp CSC--CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHH-HHHHCCCCTT
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHH-HHHhcCCccc
Confidence 665 56899999998999999999986432 35789999999999885 44443332 1
Q ss_pred ccc-ccchhhhcccccceEEEEec-ce-eeecCChHHHHHHhhhhh
Q 013483 245 NDF-GSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALT 287 (442)
Q Consensus 245 ~~~-~~~~l~~~i~~~~i~~~~~~-g~-~~di~t~~~~~~an~~~l 287 (442)
..+ ..++++.+++.+.+.++... ++ |.|++|++||.+|+..+.
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 196 GELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 112 25677777766677777665 74 999999999999998765
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.97 E-value=2.5e-30 Score=246.58 Aligned_cols=234 Identities=24% Similarity=0.393 Sum_probs=181.1
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEec-cChhhHHHHHHhhccCCCCcccC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQ-YNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~-~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
.|++||||||.||||+|+|..+||+|+|++|+ |||+|+++.|..+|+++|+|+++ +..+.+.+++.+ +.+++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 75 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGD------GSEFG 75 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhc------ccccC
Confidence 47999999999999999999999999999999 99999999999999999999986 555677777643 22233
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeee-ecCHHHHHHHHHHcCCcEEEEEee
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~-~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
.. +.+. .+.. +.|++++++.+.+++.+ ++++++.||.++ +.++.++++.|.+.+..++++..+
T Consensus 76 ~~-i~~~--~~~~-------~~G~~~al~~a~~~i~~------~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (296)
T 1mc3_A 76 IQ-LEYA--EQPS-------PDGLAQAFIIGETFLNG------EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQ 139 (296)
T ss_dssp CE-EEEE--ECSS-------CCCSTHHHHHTHHHHTT------SCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEE
T ss_pred ce-EEEe--ccCC-------CCCHHHHHHHHHHHhCC------CCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEE
Confidence 21 2222 2221 36999999999998863 688888899954 567999999997766778887777
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC-C
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT-A 244 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~-~ 244 (442)
..+ +..||++..|+++++.+|.|||..+. +++.++|+|+|+++++. .++...+. .
T Consensus 140 v~d--p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~-~~~~~~~~~~ 195 (296)
T 1mc3_A 140 VMD--PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVE-YAKQVKPSER 195 (296)
T ss_dssp CSC--CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHH-HHHSCCCCSS
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHH-HHHhcCcccc
Confidence 665 56899999888999999999986432 35789999999999985 44543332 1
Q ss_pred ccc-ccchhhhcccccceEEEEec-ce-eeecCChHHHHHHhhhhhc
Q 013483 245 NDF-GSEIIPASANEQFLKAYLFN-DY-WEDIGTIRSFFEANLALTA 288 (442)
Q Consensus 245 ~~~-~~~~l~~~i~~~~i~~~~~~-g~-~~di~t~~~~~~an~~~l~ 288 (442)
..+ ..++++.+++.+.+.++... ++ |.|+||+++|.+|+..+..
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~ 242 (296)
T 1mc3_A 196 GELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQT 242 (296)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHHH
Confidence 112 25677777766677777775 74 9999999999999987753
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=5.8e-29 Score=239.07 Aligned_cols=241 Identities=18% Similarity=0.324 Sum_probs=152.5
Q ss_pred cceEEEEEeCCCCCCCccccc-CCCccceeec-CccceehhhhhhhhhcCCcEEEEEeccCh-hhHHHHHHhhccCCCCc
Q 013483 7 RTVAAVILGGGAGTRLYPLTK-QRAKPAVPIG-GAYRLIDVPMSNCINSGINKVYILTQYNS-ASLNRHLARAYNYGSGV 83 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~-~~pK~Llpi~-g~~pli~~~l~~l~~~gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~ 83 (442)
++|+|||||||.||||+|+|. .+||+|+|++ |+ |||+|+++++.++ +++|+|++++.. +.+.+++.+.
T Consensus 3 ~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~------- 73 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE------- 73 (308)
T ss_dssp CCEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT-------
T ss_pred CccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh-------
Confidence 468999999999999999997 7999999995 88 9999999999999 999999999875 4666666431
Q ss_pred ccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeee-ecC-HHHHHHH---HHHcCCc
Q 013483 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY-RMD-YMDFVQN---HRQSGAD 158 (442)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~-~~~-l~~~l~~---~~~~~~~ 158 (442)
++...+.++. +.. +.||+++++.+..++.. .+.|++++||+++ +.+ +.++++. |.++++.
T Consensus 74 -~~~~~~~~i~--~~~-------~~gt~~al~~a~~~l~~-----~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (308)
T 2qh5_A 74 -IKNKSVGFLL--ESL-------SKNTANAIALSALMSDK-----EDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFL 138 (308)
T ss_dssp -CSSCEEEEEE--ESS-------CCCHHHHHHHHHHTSCT-----TSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCE
T ss_pred -hCCCccEEEe--CCC-------CCChHHHHHHHHHHhCC-----CCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCE
Confidence 1111122322 221 36999999999988742 2459999999977 566 8888887 6667778
Q ss_pred EEEEEeecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHh
Q 013483 159 ITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLR 238 (442)
Q Consensus 159 ~tl~~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~ 238 (442)
+|+.+.+..+ +..||++..|++++|..|.|||........ + ...++++++|+|+|++++|.+.++
T Consensus 139 ~t~~~~~~~~--~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-~------------~~g~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 139 VTFGVSIDKP--NTEFGYIESPNGLDVKRFIEKPSLDKAIEF-Q------------KSGGFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp EEEEEECSSC--CTTSEEEECSSSSBCSEEEESCCHHHHHHH-H------------HHCCEEEEEEEEEEEHHHHHHHHH
T ss_pred EEEEEecCCC--CCCceEEEECCCCEEEEEEECCChHHHHHH-h------------hcCCeEEEeEEEEEEHHHHHHHHH
Confidence 8888877544 567999988777899999999875431100 0 001368899999999987645554
Q ss_pred hhCCC------------C------cccc---cchhh--------h-ccc-ccceEEEEecceeeecCChHHHHHHhhhh
Q 013483 239 WRFPT------------A------NDFG---SEIIP--------A-SAN-EQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (442)
Q Consensus 239 ~~~~~------------~------~~~~---~~~l~--------~-~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~~ 286 (442)
+..+. . ..+. .++++ . +++ +.++++++++++|.|+|||++|.+++..-
T Consensus 204 ~~~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 204 KHAPTILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp HHCHHHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred HhChHHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 33221 0 0111 23333 2 454 47899999999999999999999998764
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=1.5e-27 Score=231.35 Aligned_cols=233 Identities=21% Similarity=0.322 Sum_probs=167.5
Q ss_pred eEEEEEeCCCCCCCcccc-cCCCccceeecC-ccceehhhhhhhhhc-CCcEEEEEeccCh-hhHHHHHHhhccCCCCcc
Q 013483 9 VAAVILGGGAGTRLYPLT-KQRAKPAVPIGG-AYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGVT 84 (442)
Q Consensus 9 ~~aVILAaG~gtRl~plt-~~~pK~Llpi~g-~~pli~~~l~~l~~~-gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~~ 84 (442)
|++||||||.||||+||| ..+||+|+|++| + |||+|+++++..+ |+++++|++++.+ ..+.+++.+. ...+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~----~~~~ 76 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPEL----PDEN 76 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTS----CGGG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhcc----ccce
Confidence 789999999999999999 679999999999 8 9999999999996 8999999999874 3556555321 0111
Q ss_pred cCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeec--CHH----HHHHHHHHcCCc
Q 013483 85 FGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM--DYM----DFVQNHRQSGAD 158 (442)
Q Consensus 85 ~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~--~l~----~~l~~~~~~~~~ 158 (442)
+ +.. +. +.||++++..+...+.. .+.|++++||+++.. +|. ++++.|++.++.
T Consensus 77 -----i-i~e---~~-------~~gta~ai~~a~~~~~~-----~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (336)
T 2x65_A 77 -----I-IAE---PM-------KKNTAPACFIGTKLADD-----DEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGL 135 (336)
T ss_dssp -----E-EEE---SS-------CCCHHHHHHHHHTTSCT-----TCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSE
T ss_pred -----E-EeC---CC-------CCCcHHHHHHHHHhhCC-----CCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCe
Confidence 1 111 11 36999999988765532 367999999997653 343 444556665677
Q ss_pred EEEEEeecCCCcCCcccEEEEcCC-----CceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHH
Q 013483 159 ITISCLPMDDSRASDFGLMKINNE-----GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL 233 (442)
Q Consensus 159 ~tl~~~~~~~~~~~~~g~v~~d~~-----~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l 233 (442)
+|+.+.+... +..||++..+++ ++|..|.|||.....+.. .....+++++|+|+|++++|
T Consensus 136 vt~~i~p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g~y~~n~Giy~~~~~~l 200 (336)
T 2x65_A 136 FTFGIVPTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKF-------------VESGRFLWNSGMFLWKAREF 200 (336)
T ss_dssp EEEEECCCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHH-------------HHHTCEEEEEEEEEEEHHHH
T ss_pred EEEEeecccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHHH-------------HhcCCeEEEeeeEEEEHHHH
Confidence 7887766543 468999987654 789999999986432100 00013688999999999987
Q ss_pred HHHHhhhCCCC----------c-ccccchhhh---------ccc-ccceEEEEecceeeecCChHHHHHH
Q 013483 234 LNLLRWRFPTA----------N-DFGSEIIPA---------SAN-EQFLKAYLFNDYWEDIGTIRSFFEA 282 (442)
Q Consensus 234 ~~~l~~~~~~~----------~-~~~~~~l~~---------~i~-~~~i~~~~~~g~~~di~t~~~~~~a 282 (442)
.+.+++..+.. . .|..+.++. +++ ..++++++++++|.|+||+++|.++
T Consensus 201 l~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 201 IEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 55554432210 0 222344554 344 4789999999999999999999999
No 21
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.95 E-value=3.4e-27 Score=220.42 Aligned_cols=221 Identities=16% Similarity=0.235 Sum_probs=159.5
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
++|++||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++++|++++..+++.+... .+ +
T Consensus 24 ~~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~-~~--------~ 93 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKE-KY--------G 93 (254)
T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHH-HH--------C
T ss_pred cCceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHH-hC--------C
Confidence 368999999999999999999999999999999 9999999999999999999999988777654432 22 1
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecCHHHHHHHHHHcCCcEEEEEeec
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPM 166 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~l~~~l~~~~~~~~~~tl~~~~~ 166 (442)
+.++...+.. ..|++++++.++..++ ++++++||+++..++ ++.+.+++..+|+ ..
T Consensus 94 ---~~iv~~~~~~-------~~g~~~al~~a~~~~~--------~~lv~~~D~~~~~~~---~~~~~~~~~~~t~---~~ 149 (254)
T 1jyk_A 94 ---VRLVFNDKYA-------DYNNFYSLYLVKEELA--------NSYVIDADNYLFKNM---FRNDLTRSTYFSV---YR 149 (254)
T ss_dssp ---CEEEECTTTT-------TSCTHHHHHTTGGGCT--------TEEEEETTEEESSCC---CCSCCCSEEEEEC---EE
T ss_pred ---cEEEECCCcc-------CCCcHHHHHHHHHHCC--------CEEEEeCCcccCHHH---HHHHHhCCceEEE---Ec
Confidence 2333322211 2589999999887663 489999999776553 2222222222232 22
Q ss_pred CCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHH---HHHHhhhCCC
Q 013483 167 DDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL---LNLLRWRFPT 243 (442)
Q Consensus 167 ~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l---~~~l~~~~~~ 243 (442)
.++ ...|+++ .|++|+|+.+.|++. +.++++|+|+|+++.+ .+++++....
T Consensus 150 ~~~-~~~~~v~-~d~~g~v~~~~e~~~------------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~ 203 (254)
T 1jyk_A 150 EDC-TNEWFLV-YGDDYKVQDIIVDSK------------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVS 203 (254)
T ss_dssp SSC-SSCCEEE-ECTTCBEEEEECCCS------------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTT
T ss_pred ccC-CCCeEEE-ECCCCeEEEEEECCC------------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhc
Confidence 221 2357754 778899999998642 1467999999998643 3344433222
Q ss_pred ---CcccccchhhhcccccceEEEEec-ceeeecCChHHHHHHhhhhh
Q 013483 244 ---ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 244 ---~~~~~~~~l~~~i~~~~i~~~~~~-g~~~di~t~~~~~~an~~~l 287 (442)
...+.+++++.++++.++.++.++ ++|.+|+|++||.+|++.+.
T Consensus 204 ~~~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~ 251 (254)
T 1jyk_A 204 GEFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILK 251 (254)
T ss_dssp TCCTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC
T ss_pred CCccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHhh
Confidence 223345677777777889999887 79999999999999998875
No 22
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.94 E-value=2.1e-27 Score=230.33 Aligned_cols=234 Identities=20% Similarity=0.298 Sum_probs=163.8
Q ss_pred ceEEEEEeCCCCCCCcccc-cCCCccceeecC-ccceehhhhhhhhhc-CCcEEEEEeccChh-hHHHHHHhhccCCCCc
Q 013483 8 TVAAVILGGGAGTRLYPLT-KQRAKPAVPIGG-AYRLIDVPMSNCINS-GINKVYILTQYNSA-SLNRHLARAYNYGSGV 83 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt-~~~pK~Llpi~g-~~pli~~~l~~l~~~-gi~~i~iv~~~~~~-~i~~~~~~~~~~~~~~ 83 (442)
+|.+||||||.||||+||| ..+||+|+|++| + |||+|+++++..+ ++++++|++++... .+.+++ ...
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l------~~~- 73 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAVARPYA------DGI- 73 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGC------SSS-
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHh------ccC-
Confidence 4899999999999999999 579999999999 7 9999999999998 89999999987642 333222 110
Q ss_pred ccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeec--CHHHHHH----HHHHcCC
Q 013483 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRM--DYMDFVQ----NHRQSGA 157 (442)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~--~l~~~l~----~~~~~~~ 157 (442)
.+ ++. + .+.||+.++..+.. +... ...+.|++++||+++.. .|.++++ .|++ ++
T Consensus 74 -----~~-i~e---~-------~~~gta~ai~~a~~-l~~~--~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~ 133 (337)
T 2cu2_A 74 -----RL-LLE---P-------LGRDTAGAVLLGVA-EALK--EGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GF 133 (337)
T ss_dssp -----EE-EEE---S-------SCCHHHHHHHHHHH-HHHH--HTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TC
T ss_pred -----ce-Eec---C-------CCCCcHHHHHHHHH-Hhcc--CCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CC
Confidence 11 221 1 13689999988876 5210 01368999999997753 3544444 3443 56
Q ss_pred cEEEEEeecCCCcCCcccEEEEcCC----CceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHH
Q 013483 158 DITISCLPMDDSRASDFGLMKINNE----GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEIL 233 (442)
Q Consensus 158 ~~tl~~~~~~~~~~~~~g~v~~d~~----~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l 233 (442)
.+|+.+.+..+ +..||++..+++ ++|..|.|||.....+. +....+++++|+|+|++++|
T Consensus 134 ~vt~~i~p~~~--~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~--------------~~~~g~~~n~Giy~f~~~~l 197 (337)
T 2cu2_A 134 VVALGLRPTRP--ETEYGYIRLGPREGAWYRGEGFVEKPSYAEALE--------------YIRKGYVWNGGVFAFAPATM 197 (337)
T ss_dssp EEEEEECCSSC--CSSSCEEEEEEEETTEEEEEEEECCCCHHHHHH--------------HHHTTCEEEEEEEEECHHHH
T ss_pred eEEEeeccCCC--CCCceEEEECCcccccCeEEEEEeCCChHHHHH--------------HhhcCCEEEEEEEEEeHHHH
Confidence 77777776543 568999988765 79999999998543210 11111689999999999987
Q ss_pred HHHHhhhCCCC-ccc--------ccchhhh---------ccc-ccceEEEEecceeeecCChHHHHHHhhh
Q 013483 234 LNLLRWRFPTA-NDF--------GSEIIPA---------SAN-EQFLKAYLFNDYWEDIGTIRSFFEANLA 285 (442)
Q Consensus 234 ~~~l~~~~~~~-~~~--------~~~~l~~---------~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~ 285 (442)
.+.+++..+.. ..+ ..+.++. +++ ..++++++++++|.|+|||++|.++...
T Consensus 198 l~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~~ 268 (337)
T 2cu2_A 198 AELFRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFSQ 268 (337)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHTS
T ss_pred HHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhhc
Confidence 55555433221 001 0123333 343 4689999999999999999999999654
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.94 E-value=9.8e-26 Score=210.30 Aligned_cols=239 Identities=18% Similarity=0.234 Sum_probs=169.3
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
++.|||||||.|||| | ||+|+|++|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~---~g------- 62 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA---FG------- 62 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---TT-------
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH---cC-------
Confidence 689999999999999 3 8999999999 99999999999999999999985 4677777753 11
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-ee-ecCHHHHHHHHHHcCCcEEEEEee
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
++++...+.. +.||++ +..+...+.. ...+.|++++||. ++ ...+.++++.|.++++++++++.+
T Consensus 63 --~~v~~~~~~~-------~~Gt~~-~~~~~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (252)
T 3oam_A 63 --GVVCMTSPNH-------QSGTER-LAEVVAKMAI---PADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVE 129 (252)
T ss_dssp --CEEEECCTTC-------CSHHHH-HHHHHHHTTC---CTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEE
T ss_pred --CEEEEcCCCC-------CCcHHH-HHHHHHhcCc---CCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeee
Confidence 2233222221 368888 4555555520 0147899999999 44 456899999998888889999888
Q ss_pred cCCCcCCcc-----cEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 013483 166 MDDSRASDF-----GLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (442)
Q Consensus 166 ~~~~~~~~~-----g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~ 240 (442)
.++ +.+| |.+..|++|++..|.++|-........ ..+. ....+++.++|+|+|++++|..+...
T Consensus 130 v~~--~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~-------~~~~-~~~~~~~~n~GiY~~~~~~l~~~~~~- 198 (252)
T 3oam_A 130 IED--EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFA-------KADK-AIVQPLLRHIGIYAYRAGFINTYLDW- 198 (252)
T ss_dssp ECC--HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHH-------SSSC-CCCSCEEEEEEEEEEETTHHHHHHHS-
T ss_pred cCC--HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccc-------cccc-cccccceEEEEEEEcCHHHHHHHHcC-
Confidence 775 4556 889999999999999987543210000 0000 00135788999999999999766543
Q ss_pred CCCCccccc--chhhhcccccceEEEEec-ceeeecCChHHHHHHhhhhhcC
Q 013483 241 FPTANDFGS--EIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 241 ~~~~~~~~~--~~l~~~i~~~~i~~~~~~-g~~~di~t~~~~~~an~~~l~~ 289 (442)
.+......+ +.+..+-.+.++.++..+ ..|.+||||+||.+|++.+..+
T Consensus 199 ~~~~~e~~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 199 QPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp CCCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred CCCcccccchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 222111111 223333346789998664 5789999999999999987643
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.91 E-value=2.3e-23 Score=193.86 Aligned_cols=236 Identities=16% Similarity=0.160 Sum_probs=158.4
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
+++.+||||+|.||||. ||+|+|++|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ ++
T Consensus 8 M~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~---~g------ 69 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED---FG------ 69 (256)
T ss_dssp -CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH---TT------
T ss_pred CCceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH---cC------
Confidence 57899999999999995 8999999999 99999999999999999999985 4667766653 12
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHc-CCcEEEEE
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQS-GADITISC 163 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~-~~~~tl~~ 163 (442)
++++...+. .+.|+++ +..+...+.. ...+.|+++.||. ++. ..+.++++.|++. +.+++.++
T Consensus 70 ---~~v~~~~~~-------~~~Gt~~-i~~a~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~ 135 (256)
T 3tqd_A 70 ---AVVCMTSSD-------HQSGTER-IAEAAVALGF---EDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLC 135 (256)
T ss_dssp ---CEEEECCTT-------CCSHHHH-HHHHHHHTTC---CTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEE
T ss_pred ---CeEEEeCCC-------CCCcHHH-HHHHHHHhCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 223322222 1357776 6777777631 1147999999999 444 4588999998775 45667677
Q ss_pred eecCCC----cCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhh
Q 013483 164 LPMDDS----RASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (442)
Q Consensus 164 ~~~~~~----~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~ 239 (442)
.+..+. ++..+ .+..|++|++..|.++|.+....... ..+......+++.++|+|.|++++|..+. +
T Consensus 136 ~~v~~~~~~~~p~~v-kvv~d~~g~~l~fsr~pip~~r~~~~-------~~~~~~~~~~~~~~~GiY~y~~~~l~~~~-~ 206 (256)
T 3tqd_A 136 TPITEVDELFNPHST-KVVLNRRNYALYFSHAPIPWGRDTFS-------DKENLQLNGSHYRHVGIYAYRVGFLEEYL-S 206 (256)
T ss_dssp EECCCHHHHTCTTSC-EEEECTTSBEEEEESSCSSCCTTTTT-------CGGGCCCSSCCEEEEEEEEEEHHHHHHHH-H
T ss_pred eEcCCHHHhhCCCcc-EEEECCCCEEeEEecCCCCCCCcccc-------cccccccCCcceEEEEEEEcCHHHHHHHH-h
Confidence 665431 22333 35678899999999998743210000 00000011257889999999999997553 3
Q ss_pred hCCCCcccc--c--chhhhcccccceEEEEecce-eeecCChHHHHHHhhh
Q 013483 240 RFPTANDFG--S--EIIPASANEQFLKAYLFNDY-WEDIGTIRSFFEANLA 285 (442)
Q Consensus 240 ~~~~~~~~~--~--~~l~~~i~~~~i~~~~~~g~-~~di~t~~~~~~an~~ 285 (442)
..+. .++ + +.+..+-.+.++.++..+++ |.+||||+||.+|++.
T Consensus 207 l~~s--~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 207 WDAC--PAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp SCCC--HHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred CCCC--cccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 2222 121 1 23444556789999999875 8999999999999864
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.91 E-value=3e-23 Score=193.91 Aligned_cols=238 Identities=16% Similarity=0.206 Sum_probs=162.9
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
.+++.|||||||.||||. +|+|+|++|+ |||+|+++++.++++++|+|+++ .+.+.+++.+ + +
T Consensus 16 ~M~~~aIIlA~G~stRlp------~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~-~--g----- 78 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRLP------GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA-A--G----- 78 (264)
T ss_dssp --CCEEEEECCSCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-T--T-----
T ss_pred CCceEEEEEcCCCCCCCC------CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH-c--C-----
Confidence 456899999999999992 5999999999 99999999999999999999884 4667666643 1 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-ee-ecCHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LY-RMDYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~-~~~l~~~l~~~~~~~~~~tl~~ 163 (442)
++++...+. ++.|++. +..+...+.. ...+.|+++.||. ++ ...+.++++.+++.++++++++
T Consensus 79 ----~~v~~~~~~-------~~~Gt~~-i~~~~~~l~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~ 143 (264)
T 3k8d_A 79 ----GEVCMTRAD-------HQSGTER-LAEVVEKCAF---SDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLA 143 (264)
T ss_dssp ----CEEEECCTT-------CCSHHHH-HHHHHHHHTC---CTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEE
T ss_pred ----CEEEEecCC-------CCCCHHH-HHHHHHHhcc---CCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEE
Confidence 223222222 1357776 7777776631 1147999999999 44 4558999999988788889888
Q ss_pred eecCCCc-CCccc--EEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 013483 164 LPMDDSR-ASDFG--LMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (442)
Q Consensus 164 ~~~~~~~-~~~~g--~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~ 240 (442)
.+.+++. ..+.+ .+..|++|++..|.++|.......... ...+ ...+++.++|+|+|++++|..+...
T Consensus 144 ~~v~d~~~~~~p~~vkVv~d~~g~~l~fsr~~ip~~r~~~~~-------~~~~-~~~~~~~~~GiY~y~~~~l~~~~~~- 214 (264)
T 3k8d_A 144 VPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAE-------GLET-VGDNFLRHLGIYGYRAGFIRRYVNW- 214 (264)
T ss_dssp EECCSHHHHTCTTSCEEEECTTSBEEEEESSCCSCCHHHHHH-------CSSC-CCSCCEEECSEEEEEHHHHHHHHHS-
T ss_pred EEcCCHHHccCCCceEEEECCCCeEEEEecCCCCCCCccccc-------cccc-cCCcceEEEEEEEECHHHHHHHHhC-
Confidence 8876521 11111 356788999999999986421100000 0000 1124688999999999999766442
Q ss_pred CCCCcccc--c--chhhhcccccceEEEEec-ceeeecCChHHHHHHhhhh
Q 013483 241 FPTANDFG--S--EIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLAL 286 (442)
Q Consensus 241 ~~~~~~~~--~--~~l~~~i~~~~i~~~~~~-g~~~di~t~~~~~~an~~~ 286 (442)
.+. .++ + +.+..+-.+.+++++... ..|.+|+||+||.+|++.+
T Consensus 215 ~~~--~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 215 QPS--PLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp CCC--HHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred CCC--hhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 121 121 1 233444457789998654 5689999999999998753
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.89 E-value=5.8e-22 Score=182.65 Aligned_cols=225 Identities=17% Similarity=0.207 Sum_probs=152.5
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+ +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~---------~-- 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVED---------L-- 60 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT---------T--
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh---------c--
Confidence 5889999999999997 9999999999 9999999999999 9999999975 566666532 1
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEEEEEee
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
+.++...+. ...|+++++. +...+. .+.|++++||+ +++ ..+.++++.|.+.+..+++....
T Consensus 61 --~~~~~~~~~-------~~~g~~~~~~-~~~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 124 (234)
T 2y6p_A 61 --CEVFLTPSD-------LPSGSDRVLY-VVRDLD------VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKD 124 (234)
T ss_dssp --SEEEECCTT-------CCSHHHHHHH-HHTTCC------CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEEC
T ss_pred --eEEEECCcc-------cccchHHHHH-HHHhCC------CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCC
Confidence 112211111 1247777663 444443 47899999999 776 56899999998776445555442
Q ss_pred cCC-CcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 013483 166 MDD-SRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (442)
Q Consensus 166 ~~~-~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~ 244 (442)
... .++..++ +..+++|++..+.+|+..... + + . ..+.+.++|+|+|++++|..+.+. .+..
T Consensus 125 ~~~~~~~~~~~-~~~~~~g~v~~~~e~~~~~~~-~------------~-~-~~~~~~~~giy~~~~~~l~~~~~~-~~~~ 187 (234)
T 2y6p_A 125 KEAYERPEDVK-VVLDREGYALYFSRSPIPYFR-K------------N-D-TFYPLKHVGIYGFRKETLMEFGAM-PPSK 187 (234)
T ss_dssp SGGGGCTTSCE-EEECTTSBEEEEESSCCSCCS-S------------C-C-SSCCEEEEEEEEEEHHHHHHHHHS-CCCH
T ss_pred HHHhcCCCceE-EEEcCCCCEeeeecCCCCccc-c------------c-c-cceeeEEEEEEEcCHHHHHHHHhC-CCCc
Confidence 111 1123333 345778999999988753110 0 0 0 012467999999999988765532 1111
Q ss_pred cccccc--hhhhcccccceEEEEecceeeecCChHHHHHHhhhh
Q 013483 245 NDFGSE--IIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (442)
Q Consensus 245 ~~~~~~--~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~ 286 (442)
....+. .+..+.++.++.++..+++|.||+||+||..|++.+
T Consensus 188 ~~~~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 188 LEQIEGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHHHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred cchhhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 111111 122233467899999999999999999999998765
No 27
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.89 E-value=1.6e-22 Score=186.30 Aligned_cols=214 Identities=18% Similarity=0.233 Sum_probs=134.7
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
|++|.+||||||.|+||+|+ ||+|+|++|+ |||+|+++.+.++ +++++|++ +..+++.+++.+.+ +.
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~--~~---- 82 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDK--GF---- 82 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTS--CC----
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhc--CC----
Confidence 55799999999999999976 9999999999 9999999999999 99999999 77777777753322 11
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecCH-HHHHHHHHHcCCcEEEEEe
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDY-MDFVQNHRQSGADITISCL 164 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~l-~~~l~~~~~~~~~~tl~~~ 164 (442)
.+.++..... ..|++++++.+...+. +++++++||+.++.++ .++++. . . +++..
T Consensus 83 ---~~~~v~~~~~--------~~g~~~~i~~a~~~~~-------~~~lv~~~D~p~~~~~~~~l~~~----~-~-~~~~~ 138 (232)
T 2xme_A 83 ---NYKIVRHDRP--------EKGNGYSLLVAKNHVE-------DRFILTMGDHVYSQQFIEKAVRG----E-G-VIADR 138 (232)
T ss_dssp ---CEEEEECSCG--------GGCHHHHHHTTGGGCC-------SSEEEEETTEEECHHHHHHHTTC----C-E-EEEES
T ss_pred ---cEEEEECCCC--------CCCcHHHHHHHHHHCC-------CCEEEEcCCcccCHHHHHHHHhC----C-C-cEEEc
Confidence 1334332211 1589999999987774 5799999999775443 344332 1 1 22221
Q ss_pred ecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 013483 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (442)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~ 244 (442)
.....+..+++.+..+ ++++..+.+++.. ++..++|+|++++++|. .+++.....
T Consensus 139 ~~~~~~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~-~l~~~~~~g 193 (232)
T 2xme_A 139 EPRFVDIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFE-HAEKLRDRE 193 (232)
T ss_dssp SCSSSCTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHH-HHGGGTTSS
T ss_pred cccccCCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHH-HHHHHHhcC
Confidence 1111123466666665 6889998876642 24568999999999886 445432111
Q ss_pred cccccchhhhcccccceEEEEec-ceeeecCChHHHHHHhhh
Q 013483 245 NDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLA 285 (442)
Q Consensus 245 ~~~~~~~l~~~i~~~~i~~~~~~-g~~~di~t~~~~~~an~~ 285 (442)
+..+..+++...+..+.++ ++|.+++||+||.++++.
T Consensus 194 ----~~~l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 194 ----EIPLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp ----CCCHHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred ----hhHHHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 1123444544457777765 689999999999988764
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.88 E-value=1e-21 Score=182.29 Aligned_cols=228 Identities=17% Similarity=0.275 Sum_probs=154.7
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCC-cEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGI-NKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi-~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+.++++ ++|+|++++ +.+.+++.+ + +
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~--~------ 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA-F--G------ 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH-T--T------
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH-c--C------
Confidence 589999999999999 5 9999999999 999999999999996 999999975 566666643 1 1
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHc-CCcEEEEE
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQS-GADITISC 163 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~-~~~~tl~~ 163 (442)
++++...+. +..|+++++. +...+. .+.|++++||+ +.. ..+.++++.|++. ++++++.+
T Consensus 64 ---~~~~~~~~~-------~~~g~~~~~~-~~~~~~------~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 126 (245)
T 1h7e_A 64 ---GKAIMTRND-------HESGTDRLVE-VMHKVE------ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLC 126 (245)
T ss_dssp ---CEEEECCSC-------CSSHHHHHHH-HHHHSC------CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred ---CeEEeCCCc-------cCCcHHHHHH-HHHhCC------CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 223322121 1247766554 344443 47899999999 333 4588999999887 67777777
Q ss_pred eecCCCcCCccc--EEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhC
Q 013483 164 LPMDDSRASDFG--LMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (442)
Q Consensus 164 ~~~~~~~~~~~g--~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~ 241 (442)
.+.......+++ .+..+++|++..|.+++..... +.. ..+.+.++|+|+|+++.|..++ + .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r--------------~~~-~~~~~~~~g~y~~~~~~l~~~~-~-~ 189 (245)
T 1h7e_A 127 HAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPR--------------NAE-KARYLKHVGIYAYRRDVLQNYS-Q-L 189 (245)
T ss_dssp EEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCT--------------TGG-GCCEEEEEEEEEEEHHHHHHGG-G-S
T ss_pred ecCCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCc--------------ccc-cCceeEEEEEEEcCHHHHHHHH-h-C
Confidence 665211001222 2333678899988876533110 000 0124679999999999886654 2 1
Q ss_pred CCCcccccchhhhc---ccccceEEEEecceeeecCChHHHHHHhhhhh
Q 013483 242 PTANDFGSEIIPAS---ANEQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 242 ~~~~~~~~~~l~~~---i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l 287 (442)
........+.++.+ ..+.++.++..++.|.||+||+||..|+..+.
T Consensus 190 ~~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 190 PESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp CCCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHH
T ss_pred CCCccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 21111113444443 23678999999999999999999999988764
No 29
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.87 E-value=6.1e-21 Score=177.21 Aligned_cols=236 Identities=15% Similarity=0.154 Sum_probs=158.9
Q ss_pred eEEEEEeCCCCCCCcccccCCCccceeecCccceehhhh-hhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPM-SNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 9 ~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l-~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
..|||||+|.||||. +|+|+|++|+ |||+|++ +.+.++++++|+|+++ .+.+.+++.+ ++
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~---~g------- 62 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATD--DERIAEICRA---EG------- 62 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHT---TT-------
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHH---cC-------
Confidence 469999999999996 5999999999 9999999 9999999999999996 3566666543 11
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHcC-Cc-EEEEE
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSG-AD-ITISC 163 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~-~~-~tl~~ 163 (442)
++++...+.. +.|+ +++..+...+.. ...+.|+++.||. ++. ..+.++++.|++.+ .. +|+++
T Consensus 63 --~~v~~~~~~~-------~~Gt-~~i~~a~~~~~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~ 129 (253)
T 4fcu_A 63 --VDVVLTSADH-------PSGT-DRLSEVARIKGW---DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE 129 (253)
T ss_dssp --CCEEECCTTC-------CCHH-HHHHHHHHHHTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE
T ss_pred --CeEEEeCCCC-------CChH-HHHHHHHHhcCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE
Confidence 1122111211 2466 467777777741 1147899999999 554 45889999988763 33 44444
Q ss_pred eecCC----CcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhh
Q 013483 164 LPMDD----SRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (442)
Q Consensus 164 ~~~~~----~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~ 239 (442)
+..+ .++..+ .+..|++|++..|.++|.......... .++.....++.++|+|+|++++|..+...
T Consensus 130 -~~~~~~~~~~p~~~-kvv~d~~g~~l~fsr~~ip~~r~~~~~--------~~~~~~~~~~~~~GiY~f~~~~l~~~~~~ 199 (253)
T 4fcu_A 130 -PIHALDEFQRDSIV-KVVMSKQNEALYFSRATIPYDRDGAKR--------DEPTLHTQAFRHLGLYAYRVSLLQEYVTW 199 (253)
T ss_dssp -ECCCHHHHHCTTSC-EEEECTTSBEEEEESSCCSCCTTTSSS--------SSCCCCSCCEEEEEEEEEEHHHHHHHTTS
T ss_pred -EcCCHHHccCCCcc-EEEECCCCeEEEecCCCCCCCCCcccc--------cccccccceeEEEEEEEeCHHHHHHHHhC
Confidence 3221 224444 456788999999999876432100000 00000124678999999999999766421
Q ss_pred hCCCCcccc-cchh---hhcccccceEEEEecce-eeecCChHHHHHHhhhhhcC
Q 013483 240 RFPTANDFG-SEII---PASANEQFLKAYLFNDY-WEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 240 ~~~~~~~~~-~~~l---~~~i~~~~i~~~~~~g~-~~di~t~~~~~~an~~~l~~ 289 (442)
+. ..++ .+.+ ..+-.+.+++++..+++ |.+||||+||.+|++.+..+
T Consensus 200 --~~-~~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 200 --EM-GKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp --CC-CHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred --CC-CcccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 21 1221 1223 33345789999999999 99999999999999877543
No 30
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.86 E-value=1.3e-20 Score=176.78 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=157.4
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.++++++|+|++++ +.+.+++.+ + +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~-~--~------- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS-F--G------- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH-T--T-------
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh-c--C-------
Confidence 5889999999999995 4999999999 999999999999999999999874 456666543 1 1
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEEEEEee
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
++++...+. .+.|++ .+..+...+.. ...+.|++++||. ++. ..+.++++.|.+.++++++++.+
T Consensus 63 --~~~~~~~~~-------~~~g~~-~~~~~~~~l~~---~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (262)
T 1vic_A 63 --AEVCMTSVN-------HNSGTE-RLAEVVEKLAI---PDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVK 129 (262)
T ss_dssp --CEEEECCCS-------SCCHHH-HHHHHHHHTTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred --CEEEECCcc-------ccCChH-HHHHHHHHhcc---CCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 222221111 124665 45555555531 1147899999999 443 55889999998887788887777
Q ss_pred cCCCc---CCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 013483 166 MDDSR---ASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (442)
Q Consensus 166 ~~~~~---~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~ 242 (442)
..+.. ...+..+..+++|++..|.+++..........+ ....+.+ ....++.++|+|+|+++++..+... .+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~---~~~~~~~-~p~~~~~~~giy~~~~~~l~~~~~~-~~ 204 (262)
T 1vic_A 130 IHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNL---QDVQKVQ-LSDAYLRHIGIYAYRAGFIKQYVQW-AP 204 (262)
T ss_dssp CCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTC---SCGGGCC-CCTTCEEEEEEEEEEHHHHHHHHHS-CC
T ss_pred cCCHHHhcCCCceEEEECCCCCEeeeecCCCCcCCcccccc---ccccccc-cccceEEEEEEEEeeHHHHHHHHhC-CC
Confidence 65420 123445555778899988876532100000000 0000000 0112578999999999988654322 11
Q ss_pred CCcccccchhh--hcc-cccceEEEEec-ceeeecCChHHHHHHhhhhhcC
Q 013483 243 TANDFGSEIIP--ASA-NEQFLKAYLFN-DYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 243 ~~~~~~~~~l~--~~i-~~~~i~~~~~~-g~~~di~t~~~~~~an~~~l~~ 289 (442)
...+. .+++. .++ .+.++.++..+ ++|.||+||+||..|+..+...
T Consensus 205 ~~~~~-~e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 205 TQLEN-LEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp CHHHH-HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred Cchhh-hhhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 11010 11122 133 46789999998 7999999999999999887654
No 31
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.85 E-value=5.4e-22 Score=195.33 Aligned_cols=257 Identities=14% Similarity=0.132 Sum_probs=142.3
Q ss_pred CeEEEEcCCeeeec--CHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcC--CCceEEEEeCCCcccccccccccc
Q 013483 130 EDVLILSGDHLYRM--DYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINN--EGRVLSFSEKPKGKDLKAMAVDTT 205 (442)
Q Consensus 130 ~~~lv~~gD~i~~~--~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~--~~~v~~i~ek~~~~~~~~~~~~~~ 205 (442)
+.=|+-.+|+++.. +|.+++++|. +|+.. .+++..+|+...++ ++++ .|.|||.....
T Consensus 11 ~~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~-------- 72 (374)
T 2iu8_A 11 SSGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH-------- 72 (374)
T ss_dssp ----------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH--------
T ss_pred ccCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh--------
Confidence 45577789999987 7999999885 35554 23366788877764 4566 99999985421
Q ss_pred cccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCCcccccchhhhcccccceEEEEecceeeec--CChHHHHHHh
Q 013483 206 VLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTANDFGSEIIPASANEQFLKAYLFNDYWEDI--GTIRSFFEAN 283 (442)
Q Consensus 206 ~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~~l~~~i~~~~i~~~~~~g~~~di--~t~~~~~~an 283 (442)
..+.++|+|+|+++++.++. .+ .+.++ ++.+.+.++|....+|++. .++
T Consensus 73 ------------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~~~~a~~~~~~~~~~~i~~~------- 123 (374)
T 2iu8_A 73 ------------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSESPSLVFQKCLELFITPVDSG------- 123 (374)
T ss_dssp ------------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSCHHHHHHHHHTTTSCCCCCS-------
T ss_pred ------------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCCHHHHHHHHHHHhccccccc-------
Confidence 14568999999998774221 12 45666 5554444444444455553 111
Q ss_pred hhhhcCCCCccccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEEC
Q 013483 284 LALTAHPPMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLG 359 (442)
Q Consensus 284 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~ 359 (442)
...+++.+.+.+++.+++++.| +++.|. ++.||++|.|+ .+.| .+++||++|.|++++.|...+.+|
T Consensus 124 ---------~~~i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG 194 (374)
T 2iu8_A 124 ---------FPGIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIG 194 (374)
T ss_dssp ---------CCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEEC
T ss_pred ---------cCccCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceEC
Confidence 1122333333334444443333 222232 34455555554 3444 345555555555555554444444
Q ss_pred Cccccchhhhhhhh--------------cCCCcceEeCCCcEe----------------------e-eeEeCCCcEECCC
Q 013483 360 ADFYETDAEVASLL--------------AEGRVPVGIGENTKI----------------------K-ECIIDKNARIGKN 402 (442)
Q Consensus 360 ~~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~i----------------------~-~~~ig~~~~ig~~ 402 (442)
+++.+.+....... -+...++.||++|.| . .++|+++|+||++
T Consensus 195 ~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~IG~~ 274 (374)
T 2iu8_A 195 KRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQH 274 (374)
T ss_dssp TTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEECTTCEECTT
T ss_pred CCCEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcccceeECCCcEECCccccCCccEECCC
Confidence 43333221100000 000001333333333 2 2556788999999
Q ss_pred eEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 403 VIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
+++.+...+.+.++||++++||.++.| ||++++|+++|+|
T Consensus 275 ~~i~~~~~v~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 275 SMIVAQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGV 319 (374)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECSSCEECTTEEECTTCEE
T ss_pred CEEccCcccCCCcEECCCeEEecCcEECCCcccCCCcEEccCcee
Confidence 999999999999999999999999877 9999999999875
No 32
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.83 E-value=5.8e-20 Score=170.60 Aligned_cols=230 Identities=13% Similarity=0.104 Sum_probs=147.0
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhh-HHHHHHhhccCCCCc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSAS-LNRHLARAYNYGSGV 83 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~-i~~~~~~~~~~~~~~ 83 (442)
|+++.+||||||.|+||++ ..+||+|+|++|+ |||+|+++.+.+++ +++|+|++++.... +.+.+.. +.+ +.
T Consensus 1 M~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~-~~~-~~- 74 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKK-YIS-DD- 74 (246)
T ss_dssp -CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHH-HCC-CT-
T ss_pred CCccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHH-hCC-CC-
Confidence 3468999999999999985 4689999999999 99999999999997 99999999876543 3333333 211 11
Q ss_pred ccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCC-CccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEE
Q 013483 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRN-KVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADIT 160 (442)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~-~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~t 160 (442)
.+.++.. + .+..++++.++..+..... ...+.+++++||. ++. ..+.++++.+.+.++.+
T Consensus 75 -----~~~~~~~-~----------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i- 137 (246)
T 3f1c_A 75 -----RIVVIEG-G----------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVD- 137 (246)
T ss_dssp -----TEEEEEC-C----------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEE-
T ss_pred -----CEEEECC-C----------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEE-
Confidence 1333321 1 3677889888887752000 0137899999999 444 44889999998876543
Q ss_pred EEEeecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh
Q 013483 161 ISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR 240 (442)
Q Consensus 161 l~~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~ 240 (442)
.+.+..+ .++..++++.+..+.+|+.. +..-..++|+.+.|.++++..
T Consensus 138 -~~~~~~d------~i~~~~~~~~v~~~~~r~~l-------------------------~~~qtpq~f~~~~L~~a~~~~ 185 (246)
T 3f1c_A 138 -TVIEALD------TIVESSNHEVITDIPVRDHM-------------------------YQGQTPQSFNMKKVFNHYQNL 185 (246)
T ss_dssp -EEEECSS------CEEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTS
T ss_pred -EEEeccc------eEEEecCCCeEEEecChHHh-------------------------hhhcCCceeEHHHHHHHHHHH
Confidence 3444332 23333444555554443321 123356799998887777653
Q ss_pred CCCCcccccchhhhccc-ccceEEEEecceeeecCChHHHHHHhhhhhcCC
Q 013483 241 FPTANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTAHP 290 (442)
Q Consensus 241 ~~~~~~~~~~~l~~~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~~ 290 (442)
.........|....+.. +.++..++.+..|.+|++|+||..|+..+..+.
T Consensus 186 ~~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 186 TPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp CHHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred HHcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 11111122344443333 568999999899999999999999999876543
No 33
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.82 E-value=2.2e-19 Score=179.15 Aligned_cols=340 Identities=14% Similarity=0.150 Sum_probs=200.9
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeec-Cccceehhhhhhhhhc----C--CcEEEEEeccChhhHHHHHHhhccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----G--INKVYILTQYNSASLNRHLARAYNY 79 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~-g~~pli~~~l~~l~~~----g--i~~i~iv~~~~~~~i~~~~~~~~~~ 79 (442)
.++.+||||||.||||+ .+.||+|+|+. |+ |+|++.++++.++ | +.-+++...+..+.+.+++++...|
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~f 153 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNS 153 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTS
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccC
Confidence 67999999999999996 78999999999 88 9999999999887 5 5555555556678999999763223
Q ss_pred CCCcccCCceEEEecccccC---------------C--cCCCccccChHHHHHHhh------hhhcCCCCCccCeEEEEc
Q 013483 80 GSGVTFGDGCVEVLAATQTP---------------G--EAGKRWFQGTADAVRQFH------WLFEDPRNKVIEDVLILS 136 (442)
Q Consensus 80 ~~~~~~~~~~v~i~~~~~~~---------------~--~~~~~~~~G~~~al~~~~------~~l~~~~~~~~~~~lv~~ 136 (442)
+ .. +.+. .|.. . ..-...|.|+|+++.... ..++ .+.++|+|.+
T Consensus 154 G------~~-I~~f--~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~----~G~e~~~V~n 220 (469)
T 2icy_A 154 N------VD-IHTF--NQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLS----QGKEYVFVAN 220 (469)
T ss_dssp S------SC-EEEE--ECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHT----TTCCEEEEEE
T ss_pred C------ce-EEEE--EecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHh----cCCCEEEEEE
Confidence 2 21 2211 1100 0 001124689999997642 2232 1247999999
Q ss_pred CCeeeecCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcCCCc--eEEEEeCCCccccccccccccccccccccc
Q 013483 137 GDHLYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGR--VLSFSEKPKGKDLKAMAVDTTVLGLSKQEA 214 (442)
Q Consensus 137 gD~i~~~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~~--v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~ 214 (442)
+|.+.......++.+|.++++++++.+.+...+ ...+|.+... +++ +.++.|+|.....+. +.
T Consensus 221 ~DnL~~~~d~~ll~~~~~~~a~~t~~v~~k~~~-~~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e~-----------k~-- 285 (469)
T 2icy_A 221 SDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLA-DVKGGTLISY-EGKVQLLEIAQVPDEHVNEF-----------KS-- 285 (469)
T ss_dssp TTBTTCCCCHHHHHHHHHHTCSEEEEEEECCTT-CCSSCEEEEE-TTEEEEECGGGSCGGGHHHH-----------HS--
T ss_pred CCcCCcccCHHHHHHHHHcCCCeeEEEEEeccC-CCceeEEEEE-CCEEEEEEEeccChhhhhhh-----------cc--
Confidence 999877554578999999999999998877652 2568887753 454 444445554321000 00
Q ss_pred ccccceeeeeEEEEeHHHHHHHHhhhCCCCc------------c-cccchhhhccc-ccceEEEEe-cceeeecCChHHH
Q 013483 215 EEKPYIASMGVYLFKKEILLNLLRWRFPTAN------------D-FGSEIIPASAN-EQFLKAYLF-NDYWEDIGTIRSF 279 (442)
Q Consensus 215 ~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~~------------~-~~~~~l~~~i~-~~~i~~~~~-~g~~~di~t~~~~ 279 (442)
....++.++|+|+|+.+++.++++....... . ..+.++-.++. -.+..++.+ ...|..+.+..+|
T Consensus 286 ~~~~~~~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~~~~~~~~V~R~~F~PvKn~~dl 365 (469)
T 2icy_A 286 IEKFKIFNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDL 365 (469)
T ss_dssp SSSCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHH
T ss_pred ccccceeeEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhcCCeEEEEechhHcCcCCCHHHH
Confidence 0122456999999999999887765211100 0 00122222222 123445544 3579999999999
Q ss_pred HHHhhhhhcCCCCccccCCCCcccccCccCCCceecC--Cceee--eEEcC-CCEEeceEEeeeEEcCCcEECCCCEEec
Q 013483 280 FEANLALTAHPPMFSFYDATKPIYTSRRNLPPSKIDD--SKIVD--SIISH-GSFITSSFIEHSVVGIRSRINANVHLKD 354 (442)
Q Consensus 280 ~~an~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~i~~--~~i~~-~~~i~~~~i~~~~ig~~~~i~~~~~i~~ 354 (442)
+.+.+.+.....+....++... ..+.|-..+.+ ..|.+ ..+.. ...++ ..+-+|-.++..|.++++..
T Consensus 366 l~~~s~l~~~~~g~~~~~~~~~----~~~~P~v~l~~~~~~v~~f~~rf~~~p~~~~---~~~l~v~gdv~fg~~v~l~G 438 (469)
T 2icy_A 366 LLVQSDLYTLVDGFVTRNKART----NPSNPSIELGPEFKKVATFLSRFKSIPSIVE---LDSLKVSGDVWFGSSIVLKG 438 (469)
T ss_dssp HHHHSTTEEEETTEEEECTTCC----SSSCCEEEECGGGCSHHHHHHTBSSCCBCTT---EEEEEEESEEEECSSCEEEE
T ss_pred HHHHHHHHHHhcCcEEecCccc----CCCCCeEEcChhhhhHHHHHHhcCCCccccc---CCeEEEEeeeEEcCCcEEEE
Confidence 9999985443322111122110 11111111110 01100 00000 11111 12445666788888888877
Q ss_pred eEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEE
Q 013483 355 TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARI 399 (442)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~i 399 (442)
.+++.++ ++ .|..|-++++++|.+|..+.+|
T Consensus 439 ~v~i~~~-------------~~-~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 439 KVTVAAK-------------SG-VKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp EEEEECC-------------TT-CEEEECTTCEEESCEECCC---
T ss_pred EEEEEcC-------------CC-CeeecCCCCEeecceeeccCCC
Confidence 7777652 11 1378889999998888776654
No 34
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.81 E-value=2.8e-19 Score=163.27 Aligned_cols=214 Identities=18% Similarity=0.139 Sum_probs=145.7
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhh-HHHHHHhhccCCCCccc
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSAS-LNRHLARAYNYGSGVTF 85 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~-i~~~~~~~~~~~~~~~~ 85 (442)
+|.+||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++++|++++...+ +.+++. +.
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~-------~~-- 68 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG-------GE-- 68 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTC-------BT--
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhc-------cC--
Confidence 5899999999999998 4689999999999 99999999999988 89999999876533 333321 10
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeec-CHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~~~~~~~~~tl~~ 163 (442)
.+.++. +. .+.+++++.++..++. .+.+++++||+ ++.. .+.++++.|. .+.+.++.+
T Consensus 69 ---~v~~~~--~~---------~~~~~~i~~al~~~~~-----~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~ 128 (223)
T 2xwl_A 69 ---DSVIVS--GG---------VDRTESVALALEAAGD-----AEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPG 128 (223)
T ss_dssp ---TEEEEE--CC---------SSHHHHHHHHHTTCTT-----CSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred ---CeEEEc--CC---------CCHHHHHHHHHHhcCC-----CCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEE
Confidence 133332 11 2578889888877721 36889999999 4444 5889998883 344566666
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+..+ +.. + .|++|++..+.+++.. ......|+|++..+..+++...
T Consensus 129 ~~~~d--~~~--~--~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~-- 175 (223)
T 2xwl_A 129 LAPAD--TIK--A--VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT-- 175 (223)
T ss_dssp ECCSS--CEE--E--ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC--
T ss_pred Eeccc--ceE--E--EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh--
Confidence 55543 212 2 2667888877665421 1112468899887766654321
Q ss_pred Ccccccchhhhccc-ccceEEEEecceeeecCChHHHHHHhhhhhc
Q 013483 244 ANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (442)
Q Consensus 244 ~~~~~~~~l~~~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~~l~ 288 (442)
..+..+....+.. +.++..++.++.|+||+||+||..|+..+..
T Consensus 176 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 176 -AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp -SCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred -CCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 1112233332222 4568888888899999999999999887654
No 35
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.81 E-value=2.7e-19 Score=164.79 Aligned_cols=224 Identities=11% Similarity=0.053 Sum_probs=136.5
Q ss_pred eEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhc-CCcEEEEEeccCh-hhHHHHHHhhccCCCCcccC
Q 013483 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINS-GINKVYILTQYNS-ASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 9 ~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~-gi~~i~iv~~~~~-~~i~~~~~~~~~~~~~~~~~ 86 (442)
|.+||||||.|+||++ ..+||+|+|++|+ |||+|+++++.++ ++++|+|++++.. +.+.+++.+ + + ..+.
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-~--~--~~~~ 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK-Y--L--PLYK 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH-H--C--GGGG
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh-c--c--cccc
Confidence 7899999999999997 5789999999999 9999999999998 5999999999876 456655543 2 1 1110
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCC--ccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEEEE
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNK--VIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITIS 162 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~--~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~tl~ 162 (442)
..+.... . ..|+.++++.++..+... .. ..+.+++++||+ ++. ..+.++++.|++.++ .+.
T Consensus 75 -~~~~~~~---~--------~~~~~~~i~~~l~~~~~~-~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~ 139 (236)
T 2vsh_A 75 -ERIIITK---G--------GADRNTSIKNIIEAIDAY-RPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDT 139 (236)
T ss_dssp -GGEEEEE---C--------CSSHHHHHHHHHHHHHHH-SCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEE
T ss_pred -CceEEEC---C--------CCchHHHHHHHHHHHHhh-ccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEE
Confidence 0122111 0 136888999888877310 00 036789999999 554 458899998887654 234
Q ss_pred EeecCCCcCCcccEEEEcCCC-ceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhC
Q 013483 163 CLPMDDSRASDFGLMKINNEG-RVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRF 241 (442)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~-~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~ 241 (442)
+.+..+ + +..+++| ++..+.+++.. ......|+|+++.+..+++...
T Consensus 140 ~~~~~~--~-----~~~~~~g~~~~~~~~~~~~-------------------------~~~~~p~~f~~~~l~~~~~~~~ 187 (236)
T 2vsh_A 140 VVEAVD--T-----IVESTNGQFITDIPNRAHL-------------------------YQGQTPQTFRCKDFMDLYGSLS 187 (236)
T ss_dssp EEECCS--C-----EEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTCC
T ss_pred EEeccc--c-----EEEeCCCCeeeeecChHHh-------------------------eeecCCcEecHHHHHHHHHHHH
Confidence 444433 1 2223566 67666554211 1112488999998876665421
Q ss_pred CCCcccccchhhhccc-ccceEEEEecceeeecCChHHHHHHhhhhh
Q 013483 242 PTANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 242 ~~~~~~~~~~l~~~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~~l 287 (442)
........+.+..+.. +.++..+..+++|.||+||+||..|+..+.
T Consensus 188 ~~g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 188 DEEKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp HHHHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred hcCCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 1000001222233222 457888888889999999999999987653
No 36
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.81 E-value=1.5e-18 Score=159.31 Aligned_cols=220 Identities=13% Similarity=0.097 Sum_probs=131.7
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
++|.+||||||.|+||++ ..||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +.+. +.
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~---~~---- 72 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTA---FP---- 72 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHH---CT----
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhc---CC----
Confidence 468999999999999995 579999999999 99999999999985 99999999887666665 4331 10
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCC-CCccCeEEEEcCCe-eeec-CHHHHHHHHHHcCCcEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPR-NKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITIS 162 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~-~~~~~~~lv~~gD~-i~~~-~l~~~l~~~~~~~~~~tl~ 162 (442)
..+.++. . ..|++++++.+...+.... ....+.+++++||. +++. .+.++++.+.+.+..+ +.
T Consensus 73 --~~i~~~~--~---------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~-~~ 138 (231)
T 1vgw_A 73 --QVRVWKN--G---------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGG-IL 138 (231)
T ss_dssp --TSEEECC--C---------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCE-EE
T ss_pred --CceEEEc--C---------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeE-EE
Confidence 0133331 1 1489999999888773100 00147899999998 5444 4788888886654233 33
Q ss_pred EeecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 013483 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (442)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~ 242 (442)
+.+..+. . ...++|++....++. . .+...+.|+|+++.|..+++....
T Consensus 139 ~~~~~~~------~-~~~~~g~i~~~~~~~---~----------------------~~~~~~p~~f~~~~l~~~~~~~~~ 186 (231)
T 1vgw_A 139 AVPVADT------L-KRAESGQISATVDRS---G----------------------LWQAQTPQLFQAGLLHRALAAENL 186 (231)
T ss_dssp EEECCSC------E-EEESSSBEEEEECCT---T----------------------EEEEEEEEEEEHHHHHHHHHC---
T ss_pred Eeecccc------e-EEeCCCceEecCChH---H----------------------heeeeCCcEecHHHHHHHHHHHhh
Confidence 4443321 1 112345554332211 0 112235899999888766654221
Q ss_pred CCcccccchhhhcccccceEEEEecceeeecCChHHHHHHhhhh
Q 013483 243 TANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (442)
Q Consensus 243 ~~~~~~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~ 286 (442)
........++... +.++..+..++.|.||+||+||..|+..+
T Consensus 187 ~g~~~~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 187 GGITDEASAVEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp -CCCSHHHHHHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHc--CCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 1100001122221 35677777778999999999999998764
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.80 E-value=3.9e-19 Score=163.01 Aligned_cols=219 Identities=12% Similarity=0.106 Sum_probs=136.6
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhc-CCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINS-GINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~-gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
+++.+||||||.|+||+ ..+||+|+|++|+ |||+|+++.+.++ ++++|+|++++..+++.+++... +
T Consensus 3 ~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~--------~ 70 (228)
T 2yc3_A 3 KSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEES--------I 70 (228)
T ss_dssp TCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTT--------S
T ss_pred cceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHh--------C
Confidence 46899999999999997 4679999999999 9999999999998 89999999988766555444221 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~tl~~ 163 (442)
+. .+.++. .. .|..++++.++..+.. ..+.++++.||. ++. ..+.++++.|++.++ ++.+
T Consensus 71 ~~-~v~~~~--~~---------~~~~~sv~~al~~~~~----~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~ 132 (228)
T 2yc3_A 71 DV-DLSFAI--PG---------KERQDSVYSGLQEIDV----NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLG 132 (228)
T ss_dssp SS-EEEEEC--CC---------SSHHHHHHHHHTTSCT----TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEE
T ss_pred CC-cEEEEC--CC---------CCHHHHHHHHHHhhcc----CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEE
Confidence 11 133332 11 3788999999887752 136788999997 544 458899998876653 4444
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+..+. +...++++.+.++.+++. .+... ..|+|+++.|.++++.....
T Consensus 133 ~~~~~~------~~~~~~~~~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~ 181 (228)
T 2yc3_A 133 VPAKAT------IKEVNSDSLVVKTLDRKT------------------------LWEMQ-TPQVIKPELLKKGFELVKSE 181 (228)
T ss_dssp EECCSC------CCCBCTTSCBCCCCSCCC------------------------CEEEE-EEEEECHHHHHHHHHHHHHH
T ss_pred Eeccce------EEEEcCCCceEEecCccc------------------------eEEEe-CCcEEEHHHHHHHHHHHHhc
Confidence 443321 111234445543322111 01223 48999988766655432111
Q ss_pred Ccccccchhhhccc-ccceEEEEecceeeecCChHHHHHHhhhhh
Q 013483 244 ANDFGSEIIPASAN-EQFLKAYLFNDYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 244 ~~~~~~~~l~~~i~-~~~i~~~~~~g~~~di~t~~~~~~an~~~l 287 (442)
.. ...+.+..+.+ +.++..+..+..|.+|+||+||..|+..+.
T Consensus 182 ~~-~~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 225 (228)
T 2yc3_A 182 GL-EVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225 (228)
T ss_dssp TC-CCCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred CC-CcccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHh
Confidence 11 11233333332 456665555668999999999999987664
No 38
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.80 E-value=1.2e-18 Score=159.89 Aligned_cols=218 Identities=16% Similarity=0.134 Sum_probs=143.5
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
+++.|||||||.|+||+ ||+|+|++|+ |||+|+++.+.+++ +++|+|++++ +.+.+++.+ + +
T Consensus 3 m~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~--~----- 65 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAKN-F--G----- 65 (228)
T ss_dssp CEEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHHH-T--T-----
T ss_pred CceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHHH-c--C-----
Confidence 45789999999999997 9999999999 99999999999998 7999999963 455555533 1 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~tl~~ 163 (442)
++++.....-.. ...|+.++++.+...+.. ..+.|++++||. ++. ..+.++++.|++.++++++.+
T Consensus 66 ----~~~~~~~~~~~~----~~~g~~~sv~~~l~~~~~----~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 133 (228)
T 1ezi_A 66 ----VEVVLRPAELAS----DTASSISGVIHALETIGS----NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSA 133 (228)
T ss_dssp ----CEEEECCC----------CHHHHHHHHHHHHHTC----CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEE
T ss_pred ----CEEEeCchHHcC----CCCChHHHHHHHHHHhCC----CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 112111000000 024789999999988841 137899999998 444 458889888877666777777
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+..+. + ++....|++|.+..+.++.... ...+.. ...+..+.|+|+++++.+....+
T Consensus 134 ~~~~~~-p--~~~~~~~~~g~~~~~~~~~~~~-------------~~~~~~-~~~~~~~~giy~~~~~~l~~~~~----- 191 (228)
T 1ezi_A 134 CPMEHH-P--LKTLLQINNGEYAPMRHLSDLE-------------QPRQQL-PQAFRPNGAIYINDTASLIANNC----- 191 (228)
T ss_dssp EECSSC-T--TSCEEECC--CEEESSCHHHHT-------------CCGGGS-CCEEEEEEEEEEEEHHHHHHHTS-----
T ss_pred EecCCC-c--ceeeEEcCCCcEeecccccccc-------------CCcccC-chhheeeeEEEEEeHHHHhhCCc-----
Confidence 766542 2 2333336778888776521000 000000 01134578999999887643210
Q ss_pred CcccccchhhhcccccceEEEEec-ceeeecCChHHHHHHhhhhh
Q 013483 244 ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 244 ~~~~~~~~l~~~i~~~~i~~~~~~-g~~~di~t~~~~~~an~~~l 287 (442)
..+.++..+..+ ..|.||+||+||..|+..+.
T Consensus 192 ------------~~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 192 ------------FFIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp ------------SCCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred ------------ccCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 014566667765 58999999999999987654
No 39
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.78 E-value=3.6e-18 Score=171.53 Aligned_cols=343 Identities=11% Similarity=0.101 Sum_probs=196.3
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeec-Cccceehhhhhhhhhc----CCc-EEEEEec-cChhhHHHHHHhhcc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----GIN-KVYILTQ-YNSASLNRHLARAYN 78 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~-g~~pli~~~l~~l~~~----gi~-~i~iv~~-~~~~~i~~~~~~~~~ 78 (442)
..++.+||||||.||||+ ...||+|+||+ |+ |||+++++++.+. |.. .++|+++ +..+.+.+++.+...
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~ 165 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA 165 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc
Confidence 467899999999999998 78999999999 89 9999999999887 533 4667666 777889989876322
Q ss_pred CCCCcccCCceEEEeccccc---------------CC--cCCCccccChHHHHHHh-----hhhhcCCCCCccCeEEEEc
Q 013483 79 YGSGVTFGDGCVEVLAATQT---------------PG--EAGKRWFQGTADAVRQF-----HWLFEDPRNKVIEDVLILS 136 (442)
Q Consensus 79 ~~~~~~~~~~~v~i~~~~~~---------------~~--~~~~~~~~G~~~al~~~-----~~~l~~~~~~~~~~~lv~~ 136 (442)
|+. ++....|. .. +.-...|.|+++++... ++.+.. ...++++|++
T Consensus 166 fg~---------~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~---~g~~~v~V~n 233 (488)
T 2i5k_A 166 NRI---------RIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIA---QGREILFVSN 233 (488)
T ss_dssp SSC---------EEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHH---TTCCEEEEEC
T ss_pred cCc---------eEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHh---cCCCEEEEEe
Confidence 221 11111121 00 00112468999999843 233411 1247999999
Q ss_pred CCeeee-cCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccc
Q 013483 137 GDHLYR-MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAE 215 (442)
Q Consensus 137 gD~i~~-~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~ 215 (442)
+|.++. .++. ++.+|..+++++++.+.+..++ ...||.+..+ +|+ ..+.|..+.+.......+ ..
T Consensus 234 gDnL~~~~d~~-~L~~~~~~~a~~t~~v~~~~~p-~~~yG~Iv~~-dG~-~~iVE~~e~~~e~~~~~~--------~~-- 299 (488)
T 2i5k_A 234 GDNLGATVDLK-ILNHMIETGAEYIMELTDKTRA-DVKGGTLISY-DGQ-VRLLEVAQVPKEHIDEFK--------NI-- 299 (488)
T ss_dssp TTBSSCCCCHH-HHHHHHHSCCSEEEEEEECCGG-GSSSCEEEEE-TTE-EEEECGGGSCTTSHHHHT--------CT--
T ss_pred CCcCCCcccHH-HHHHHHhcCCcEEEEEEEecCC-CCceeEEEEE-CCc-EEEEEeccCCHHHHhhcc--------cc--
Confidence 999776 4564 6688889999999988876542 2348988764 565 445553332211000000 00
Q ss_pred cccceeeeeEEEEeHHHHHHHHhhhCCCCccc-----------------ccchhhhcccc-cceEEEEec-ceeeecCCh
Q 013483 216 EKPYIASMGVYLFKKEILLNLLRWRFPTANDF-----------------GSEIIPASANE-QFLKAYLFN-DYWEDIGTI 276 (442)
Q Consensus 216 ~~~~l~~~Giy~~~~~~l~~~l~~~~~~~~~~-----------------~~~~l~~~i~~-~~i~~~~~~-g~~~di~t~ 276 (442)
......++|+|+|+.++|.+++++.......+ .+.++.+++.- .+..++.++ ..|.-+.+.
T Consensus 300 ~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R~~F~PvKn~ 379 (488)
T 2i5k_A 300 RKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHFDGAHGVVVPRSRFLPVKTC 379 (488)
T ss_dssp TTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGSSSCEEEEECGGGCCBCCSH
T ss_pred cccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhccCceEEEecccccccccCC
Confidence 01245699999999999988887521110000 01112222210 122233332 357777787
Q ss_pred HHHHHHhhhhhcCCCCccccCCC-CcccccCccCCCceecCCceee--eEEcC-CCEEeceEEeeeEEcCCcEECCCCEE
Q 013483 277 RSFFEANLALTAHPPMFSFYDAT-KPIYTSRRNLPPSKIDDSKIVD--SIISH-GSFITSSFIEHSVVGIRSRINANVHL 352 (442)
Q Consensus 277 ~~~~~an~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~i~~--~~i~~-~~~i~~~~i~~~~ig~~~~i~~~~~i 352 (442)
.+++-+...+.....+.....+. .++.+.+..++. + ..+.+ ..+.. ...+.- ..-+|-.++..|.++.+
T Consensus 380 ~~ll~~~~~~~~~~~g~~~~~~~~~e~~P~v~~~~~--~--~~~~~~~~rf~~~p~i~~~---~~l~v~Gdv~fg~~v~l 452 (488)
T 2i5k_A 380 SDLLLVKSDLFRLEHGSLKLDPSRFGPNPLIKLGSH--F--KKVSGFNARIPHIPKIVEL---DHLTITGNVFLGKDVTL 452 (488)
T ss_dssp HHHHHHTSTTEEEETTEEEECTTCCSSCCEEEECGG--G--SSHHHHHHHCSSCCBCTTE---EEEEEESSEEECTTCEE
T ss_pred ccHHHHHHHHHHHhcCcEeecCCcCCCCCeEEECCc--c--cchhhHHhhcCCCcccccc---ceEEEEeeeEEcCCcEE
Confidence 77776666544332221111111 111121221211 1 01100 00111 111110 23466668888888888
Q ss_pred eceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEE
Q 013483 353 KDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARI 399 (442)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~i 399 (442)
...+++-++ ++ .++.|-++++++|.+|..+.+|
T Consensus 453 ~G~v~i~a~-------------~~-~~~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 453 RGTVIIVCS-------------DG-HKIDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp EEEEEEECC-------------TT-CCEEECTTCEEEEEEEEEEEEE
T ss_pred EEEEEEEcC-------------CC-CeEEeCCCCEEecceeeccccc
Confidence 887777542 11 1378889999998888766665
No 40
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.77 E-value=6.6e-18 Score=155.65 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=139.6
Q ss_pred ccccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhhHHHHHHhhccCCCC
Q 013483 4 RDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSG 82 (442)
Q Consensus 4 ~~~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~ 82 (442)
.++++|.+||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++..+.+.+ +.. + +.
T Consensus 3 ~~~~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~--~~- 73 (236)
T 1i52_A 3 TTHLDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL-A--NH- 73 (236)
T ss_dssp --CCCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG-G--GC-
T ss_pred CCCCceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh-c--CC-
Confidence 34567999999999999998 4579999999999 99999999999987 89999999876555443 221 1 10
Q ss_pred cccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeec-CHHHHHHHHHHcCCcEE
Q 013483 83 VTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADIT 160 (442)
Q Consensus 83 ~~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~~~~~~~~~t 160 (442)
..+.++. +. .|+.++++.++..+.. .+.|++++||. +++. .+.++++.+.+.+...
T Consensus 74 -----~~v~~~~--~~---------~g~~~~i~~al~~~~~-----~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~- 131 (236)
T 1i52_A 74 -----PQITVVD--GG---------DERADSVLAGLKAAGD-----AQWVLVHDAARPCLHQDDLARLLALSETSRTGG- 131 (236)
T ss_dssp -----TTEEEEE--CC---------SSHHHHHHHHHHTSTT-----CSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-
T ss_pred -----CCEEEEC--CC---------CCHHHHHHHHHHhcCC-----CCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-
Confidence 0133332 11 3788899988877742 37899999998 4554 3778888776554232
Q ss_pred EEEeecCCCcCCcccEEEEcCC-CceEEEEeCCCccccccccccccccccccccccccccee-eeeEEEEeHHHHHHHHh
Q 013483 161 ISCLPMDDSRASDFGLMKINNE-GRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIA-SMGVYLFKKEILLNLLR 238 (442)
Q Consensus 161 l~~~~~~~~~~~~~g~v~~d~~-~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Giy~~~~~~l~~~l~ 238 (442)
+.+.+..+ +....+++ +++....+. ..++ ..+.++|+.+.+..+++
T Consensus 132 ~~~~~~~~------~~~~~~~~~~~i~~~~~~--------------------------~~i~~~~~p~~f~~~~l~~~~~ 179 (236)
T 1i52_A 132 ILAAPVRD------TMKRAEPGKNAIAHTVDR--------------------------NGLWHALTPQFFPRELLHDCLT 179 (236)
T ss_dssp EEEEECCS------CEEEECTTSSSEEEEECC--------------------------TTCEEEEEEEEEEHHHHHHHHH
T ss_pred EEEEeccc------cEEEEcCCCCceeeccCh--------------------------HhheeeeCCceecHHHHHHHHH
Confidence 33333322 11112333 454432211 1122 22677888877666655
Q ss_pred hhCCCCcccc--cchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhcC
Q 013483 239 WRFPTANDFG--SEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 239 ~~~~~~~~~~--~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~~ 289 (442)
........+. ..++... +.++..+..++.|+||+||+||..|+..+..+
T Consensus 180 ~~~~~g~~~td~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 180 RALNEGATITDEASALEYC--GFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp HHHHTTCCCCSHHHHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred HHHhcCCCcccHHHHHHHc--CCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 4221111111 1122221 35677777778899999999999998877543
No 41
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.77 E-value=1.3e-19 Score=166.72 Aligned_cols=200 Identities=15% Similarity=0.163 Sum_probs=133.7
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
+|.+||||||. |||.+.+...||+|+|++|+ |||+|+++.+.+++. +|+|++. . +++.+++ +
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~-~-~~i~~~~--------~----- 63 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGE-N-PGLVPAP--------A----- 63 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESC-C-SSCSSCC--------S-----
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeC-h-HHHhhhc--------C-----
Confidence 58999999999 77776665689999999999 999999999999998 8888754 2 2221111 1
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe--eeecCHHHHHHHHHHcCCcEEEEEee
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~~~~~~~~~tl~~~~ 165 (442)
+.+ .. ..|++++++.+...+. +.|++++||+ +....+.++++ | ..++++++.+.+
T Consensus 64 --~~~---~~---------~~g~~~~i~~a~~~~~-------~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 64 --LTL---PD---------RGGLLENLEQALEHVE-------GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp --EEE---CC---------CSSHHHHHHHHHHTCC-------SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred --eEe---cC---------CCCHHHHHHHHHHHcC-------CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 333 11 2599999999987764 6899999999 34455888888 6 556677777665
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhh-----
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWR----- 240 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~----- 240 (442)
..+. ...|+.+ .+++..+.||| .+++|+|+|+++++..+.+..
T Consensus 121 ~~~~-~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~ 168 (232)
T 2dpw_A 121 KEAV-EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVA 168 (232)
T ss_dssp HHHH-HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHH
T ss_pred ccch-hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHH
Confidence 3221 1233322 13455554432 258899999999875443311
Q ss_pred CCC-------------------Ccccccchhhhccc--ccceEEEEe--cceeeecCChHHHH
Q 013483 241 FPT-------------------ANDFGSEIIPASAN--EQFLKAYLF--NDYWEDIGTIRSFF 280 (442)
Q Consensus 241 ~~~-------------------~~~~~~~~l~~~i~--~~~i~~~~~--~g~~~di~t~~~~~ 280 (442)
... ......++++.++. +.++..+.. .+.|.|+|||+||.
T Consensus 169 ~~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 169 LRKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp TTTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred hccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 000 01112345544443 367888877 46799999999984
No 42
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.76 E-value=8.3e-18 Score=154.30 Aligned_cols=217 Identities=14% Similarity=0.174 Sum_probs=134.8
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
+++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++. .+.+.+++.+ + +
T Consensus 2 ~~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~~-~--g----- 64 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAKQ-F--G----- 64 (229)
T ss_dssp CCEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHHH-T--T-----
T ss_pred CcEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHHH-c--C-----
Confidence 46889999999999995 5999999999 99999999999998 599999883 4566666643 1 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~~~~~~~~~tl~~ 163 (442)
++++....... .+ ..+..++++.+...+.. .+.|++++||. ++. ..+.++++.|.+.+++.++.+
T Consensus 65 ----~~~~~~~~~~~-~~---~~~~~~~v~~al~~~~~-----~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 65 ----AQVHRRSSETS-KD---SSTSLDAIVEFLNYHNE-----VDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp ----CEEEECCGGGS-ST---TCCHHHHHHHHHTTCTT-----CSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred ----CEEEeChhhhc-CC---CCcHHHHHHHHHHhcCC-----CCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 22221111000 00 12445788888877632 47899999999 444 458899999987777765555
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+..+ +..++. .| + +..|.+++..... ..++.+.....+..++|+|+|+++.| ++
T Consensus 132 ~~~~~--p~~~~v--~~--~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~n~giY~~~~~~l---~~----- 186 (229)
T 1qwj_A 132 VRRHQ--FRWSEI--QK--G-VREVTEPLNLNPA----------KRPRRQDWDGELYENGSFYFAKRHLI---EM----- 186 (229)
T ss_dssp EEECC--CEECCC--CS--S-TTCCCCBSSSBTT----------BCCCTTTSCCEEEEEEEEEEEEHHHH---HT-----
T ss_pred eeccC--hhHhhc--cc--c-ccccccccccccc----------cccCCCCCCceEEEeeEEEEEEHHHh---cc-----
Confidence 43322 333322 12 2 1112211100000 00000001123567999999999877 11
Q ss_pred CcccccchhhhcccccceEEEEec-ceeeecCChHHHHHHhhhhhc
Q 013483 244 ANDFGSEIIPASANEQFLKAYLFN-DYWEDIGTIRSFFEANLALTA 288 (442)
Q Consensus 244 ~~~~~~~~l~~~i~~~~i~~~~~~-g~~~di~t~~~~~~an~~~l~ 288 (442)
.+..+..+..+..+ ++|.||+||+||..|+..+..
T Consensus 187 ----------~~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 187 ----------GYLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ----------TCSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ----------ccccCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 11223344332444 689999999999999887754
No 43
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.72 E-value=2.3e-17 Score=147.53 Aligned_cols=130 Identities=23% Similarity=0.340 Sum_probs=92.4
Q ss_pred eEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCCc
Q 013483 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (442)
Q Consensus 9 ~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (442)
|+|||||||.|+||+| .||+|+|++|+ |||+|+++.+.++++++|+|++++..+.+.+++.+.+.+..
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~~~~------- 68 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYKDYK------- 68 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTTTTT-------
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhccCCC-------
Confidence 6899999999999997 79999999999 99999999999999999999999888888888876442211
Q ss_pred eEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCee-e-ecCHHHHHHHHHH-----cCCcEEE
Q 013483 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-Y-RMDYMDFVQNHRQ-----SGADITI 161 (442)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i-~-~~~l~~~l~~~~~-----~~~~~tl 161 (442)
.+.++... ..|++++++.+...+ . +.|++++||+. + ...+.++++.|.+ .+.+..+
T Consensus 69 ~~~~~~~~----------~~g~~~si~~al~~~-~------~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~ 131 (196)
T 3rsb_A 69 NIVVIDTS----------GKGYIEDLNECIGYF-S------EPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALA 131 (196)
T ss_dssp EEEE------------------CCCCCTTTTTC-S------SCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEE
T ss_pred CEEEEECC----------CCCcHHHHHHHHHhC-C------CCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEE
Confidence 13333211 147777888877666 2 79999999993 3 4458999999886 5555555
Q ss_pred EEeecC
Q 013483 162 SCLPMD 167 (442)
Q Consensus 162 ~~~~~~ 167 (442)
.+.+..
T Consensus 132 ~~~p~~ 137 (196)
T 3rsb_A 132 VMIPKE 137 (196)
T ss_dssp EEEETT
T ss_pred EEEEcc
Confidence 555543
No 44
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.71 E-value=9e-17 Score=143.59 Aligned_cols=115 Identities=14% Similarity=0.248 Sum_probs=86.6
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
++|.+||||||.|+||. .||+|+|++|+ |||+|+++.+.++++++++|++++..+++.+++.. ++
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~ 68 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL---------DG 68 (197)
T ss_dssp SEEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC---------TT
T ss_pred CceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc---------CC
Confidence 46899999999999995 79999999999 99999999999999999999998876666555421 11
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eee-cCHHHHHHH
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYR-MDYMDFVQN 151 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~-~~l~~~l~~ 151 (442)
+.++..... ..|++++++.+...+.. ..+.+++++||+ +++ ..+.++++.
T Consensus 69 ---~~~~~~~~~--------~~g~~~~i~~al~~~~~----~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 69 ---TDVVVVEDV--------ERGCAASLRVALARVHP----RATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp ---SEEEECC------------CCHHHHHHHHTTSCT----TEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred ---CEEEECCCc--------ccCHHHHHHHHHHHhcc----cCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 223321111 25899999999887731 147899999999 444 447777776
No 45
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.70 E-value=7.7e-16 Score=140.82 Aligned_cols=217 Identities=17% Similarity=0.172 Sum_probs=144.4
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccCh-hhHHHHHHhhccCCCCccc
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNS-ASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~-~~i~~~~~~~~~~~~~~~~ 85 (442)
++.+||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++.. +.+.+.+.. .
T Consensus 7 ~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~------~--- 73 (231)
T 3q80_A 7 EVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH------R--- 73 (231)
T ss_dssp CEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG------G---
T ss_pred ceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC------C---
Confidence 5789999999999997 5689999999999 99999999999875 899999998765 344443321 0
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~~~~~~~~~tl~~ 163 (442)
+.++. .. .+..++++.++..+... ...+.++++.||. ++..+ +.++++.+++ +.+..+..
T Consensus 74 ----v~~v~--gg---------~~r~~sv~~gl~~~~~~--~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~ 135 (231)
T 3q80_A 74 ----AMIVA--GG---------SNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPV 135 (231)
T ss_dssp ----CEEEE--CC---------SSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEE
T ss_pred ----eEEEc--CC---------CchHHHHHHHHHHhhhc--CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEE
Confidence 22322 10 23568888888877531 0136899999999 55544 7888887765 24556666
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+..++ . ...+++|.+....++ .. -+.+.+ -|.|+.+.|.++++....+
T Consensus 136 ~p~~dt--~----~~~~~~g~v~~~~~r---~~---------------------l~~~qT-Pq~F~~~~L~~a~~~~~~~ 184 (231)
T 3q80_A 136 LPLSDT--I----KAVDANGVVLGTPER---AG---------------------LRAVQT-PQGFTTDLLLRSYQRGSLD 184 (231)
T ss_dssp ECCSSC--E----EEECTTSBEEECCCG---GG---------------------EEEECS-CEEEEHHHHHHHHHHHTC-
T ss_pred EeccCC--E----EEEcCCCcEEEecch---hh---------------------eEEEcC-CcEEEHHHHHHHHHHHHhh
Confidence 666542 1 124667777665431 11 022343 6999999888887764332
Q ss_pred -Ccccccchhhhcc-cccceEEEEecceeeecCChHHHHHHhhhh
Q 013483 244 -ANDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEANLAL 286 (442)
Q Consensus 244 -~~~~~~~~l~~~i-~~~~i~~~~~~g~~~di~t~~~~~~an~~~ 286 (442)
......|....+. .+.++..++-+..++.|++|+||..|+..+
T Consensus 185 n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 185 LPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp ----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 1111223322222 256777777777789999999999998765
No 46
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.70 E-value=1.5e-16 Score=142.41 Aligned_cols=188 Identities=12% Similarity=0.171 Sum_probs=125.4
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
+++.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+++++++|++++..+++.+++.. ++
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~ 68 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL---------DG 68 (199)
T ss_dssp CCEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC---------TT
T ss_pred CceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc---------CC
Confidence 46899999999999996 69999999999 99999999999999999999998876666555421 11
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeee--ecCHHHHHHHHHHcCCcEEEEEe
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLY--RMDYMDFVQNHRQSGADITISCL 164 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~--~~~l~~~l~~~~~~~~~~tl~~~ 164 (442)
+.++..... ..|++++++.+...+.. ..+.+++++||+.+ ...+.++++. +.++++++...
T Consensus 69 ---~~~~~~~~~--------~~g~~~~i~~al~~~~~----~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~ 131 (199)
T 2waw_A 69 ---LDIVLVDDA--------GLGCSSSLKSALTWVDP----TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY 131 (199)
T ss_dssp ---SEEEECCCC--------CTTCCCHHHHHHHTSCT----TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE
T ss_pred ---CEEEECCCc--------ccCHHHHHHHHHHhhhc----cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec
Confidence 223321111 25888899999887731 14789999999943 3447788876 34444332210
Q ss_pred ecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 013483 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (442)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~ 244 (442)
+++ .. .-++|+++.+..+.+ . ...
T Consensus 132 -----------------~g~----------~~---------------------------~P~~~~~~~l~~~~~-~-~~~ 155 (199)
T 2waw_A 132 -----------------ANG----------IG---------------------------HPFWVSRGVFGDLAE-L-HGD 155 (199)
T ss_dssp -----------------TTE----------EE---------------------------EEEEEEGGGHHHHHT-C-SST
T ss_pred -----------------CCc----------cc---------------------------CCEEEcHHHHHHHHh-c-CCC
Confidence 010 00 113677777755542 1 111
Q ss_pred cccccchhhhcccc--cceEEEEe-cceeeecCChHHHHHHhhhhh
Q 013483 245 NDFGSEIIPASANE--QFLKAYLF-NDYWEDIGTIRSFFEANLALT 287 (442)
Q Consensus 245 ~~~~~~~l~~~i~~--~~i~~~~~-~g~~~di~t~~~~~~an~~~l 287 (442)
. . +..++.. .++..+.. .+.|.|||||+||..++..+.
T Consensus 156 ~----~-~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~~ 196 (199)
T 2waw_A 156 K----G-VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASVV 196 (199)
T ss_dssp T----C-HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHHH
T ss_pred H----H-HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHHh
Confidence 1 1 2222322 45777766 468999999999999987654
No 47
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.69 E-value=1.2e-16 Score=147.20 Aligned_cols=206 Identities=13% Similarity=0.090 Sum_probs=124.5
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFG 86 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (442)
+++.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++ .+.+ + .. .+
T Consensus 24 M~~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~---~~~~-~------~~---~~ 83 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPP---GAEP-P------KG---LG 83 (236)
T ss_dssp CCCEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECT---TCCC-C------TT---CS
T ss_pred CceEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCH---HHHH-h------hc---CC
Confidence 356699999999999983 4 9999999999 999999999 7789999999975 1111 1 10 01
Q ss_pred CceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHHHHHHHHHcCCcEEEEEe
Q 013483 87 DGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITISCL 164 (442)
Q Consensus 87 ~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~~~~~~~~~tl~~~ 164 (442)
+.++. .. .|+..+++.++..+. .+.+++++||+ +++.. +.++++.+...+ ..+.+.
T Consensus 84 ---v~~~~--~~---------~~~~~~i~~al~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~ 141 (236)
T 2px7_A 84 ---AVFLE--GG---------ATRQASVARLLEAAS------LPLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVL 141 (236)
T ss_dssp ---CEEEE--CC---------SSHHHHHHHHHHHCC------SSEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEE
T ss_pred ---cEEEe--CC---------CchHHHHHHHHHHcC------CCeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEE
Confidence 22221 11 367888888887775 37899999998 55544 788888876654 334334
Q ss_pred ecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCC
Q 013483 165 PMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTA 244 (442)
Q Consensus 165 ~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~ 244 (442)
+..+ .. . ..+ +|++..+.++.. .+... ..++|+++.|..+++......
T Consensus 142 ~~~~--~~---~-~~~-~G~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~g 189 (236)
T 2px7_A 142 PVPD--TL---M-APE-GEAYGRVVPREA------------------------FRLVQ-TPQGFFTALLREAHAYARRKG 189 (236)
T ss_dssp ECCS--EE---E-EEC-SSSCEEEECGGG------------------------CEEEC-SCEEEEHHHHHHHHHHHHHHT
T ss_pred ecCC--cE---E-Eec-CCeEEecCChHh------------------------hcccc-CCeEEcHHHHHHHHHHHHhcC
Confidence 4332 11 1 124 677765543211 01112 356788887755554321100
Q ss_pred cccc--cchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhc
Q 013483 245 NDFG--SEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (442)
Q Consensus 245 ~~~~--~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~ 288 (442)
..+. ..++.. .+.++..+..++.|.||+||+||..|+..+..
T Consensus 190 ~~~~d~~~ll~~--~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 233 (236)
T 2px7_A 190 LEASDDAQLVQA--LGYPVALVEGEATAFKITHPQDLVLAEALARV 233 (236)
T ss_dssp CCCSSHHHHHHH--TTCCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred CCchhHHHHHHH--cCCcEEEEECCccccCCCCHHHHHHHHHHHHh
Confidence 1110 112222 14567777777899999999999999887643
No 48
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.69 E-value=7.8e-16 Score=141.46 Aligned_cols=215 Identities=17% Similarity=0.188 Sum_probs=133.8
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcC-CcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSG-INKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
-.|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|++++....+ +.+.. . +
T Consensus 12 ~~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~---~~~~~--~----~ 78 (234)
T 1vpa_A 12 HMNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEV---VEKRV--F----H 78 (234)
T ss_dssp CCEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHH---HHTTC--C----C
T ss_pred ccCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHH---HHHHh--c----c
Confidence 35889999999999998 4579999999999 99999999999998 899999998765432 11111 1 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeec-CHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~~~~~~~~~tl~~ 163 (442)
.. .+... .. -.+..++++.++..+... ..+.+++++||. ++.. .+.++++.+...++ .+.+
T Consensus 79 ~~-~~~~~---~g--------g~~~~~sv~~al~~~~~~---~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~--~i~~ 141 (234)
T 1vpa_A 79 EK-VLGIV---EG--------GDTRSQSVRSALEFLEKF---SPSYVLVHDSARPFLRKKHVSEVLRRARETGA--ATLA 141 (234)
T ss_dssp TT-EEEEE---EC--------CSSHHHHHHHHHHHHGGG---CCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE--EEEE
T ss_pred CC-ceEEe---CC--------CCcHHHHHHHHHHHhhhc---CCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEE
Confidence 11 12111 00 013778888888777410 135788889999 5554 47888888766543 3333
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPT 243 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~ 243 (442)
.+..+ ++...+++| + .+.++.. .+.....++|+.+.+..+++... .
T Consensus 142 ~~~~~------~~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~-~ 187 (234)
T 1vpa_A 142 LKNSD------ALVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENGG-E 187 (234)
T ss_dssp EECCS------EEEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTCC-C
T ss_pred EecCC------cEEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhcC-C
Confidence 33322 122234556 5 5543211 01122455889888766654310 0
Q ss_pred CcccccchhhhcccccceEEEEecceeeecCChHHHHHHhhhhhc
Q 013483 244 ANDFGSEIIPASANEQFLKAYLFNDYWEDIGTIRSFFEANLALTA 288 (442)
Q Consensus 244 ~~~~~~~~l~~~i~~~~i~~~~~~g~~~di~t~~~~~~an~~~l~ 288 (442)
... ...++.. .+.++..+..++.|.||+||+||..|++.+..
T Consensus 188 ~~~-~~~~~~~--~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~ 229 (234)
T 1vpa_A 188 WAD-DTEPVQK--LGVKIALVEGDPLCFKVTFKEDLELARIIARE 229 (234)
T ss_dssp CSS-SHHHHHT--TTCCCEEEECCGGGCCCCSTTHHHHHHHHHHH
T ss_pred CCc-HHHHHHH--cCCcEEEEECCchhcCCCCHHHHHHHHHHHhc
Confidence 000 0112222 13566667667789999999999999886643
No 49
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.69 E-value=1.8e-16 Score=148.12 Aligned_cols=146 Identities=15% Similarity=0.129 Sum_probs=111.9
Q ss_pred CCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEE-------------eceEEEC
Q 013483 297 DATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHL-------------KDTMMLG 359 (442)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i-------------~~~~~~~ 359 (442)
+|.+.+.+++.+++.+.+ +.+.|. ++.||++|+|+ ++.| .+++||++|.|++++.| ...+.+|
T Consensus 4 ~p~a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG 83 (259)
T 3hsq_A 4 HPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIG 83 (259)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEEC
T ss_pred CCCcEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEEC
Confidence 344444444444444444 333332 67888888888 6777 46999999999999999 6788888
Q ss_pred CccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCC
Q 013483 360 ADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKN 433 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~ 433 (442)
+++.+.+....+..+....++.||++|.|. ++.|+++|.||+++.+++...+..+++||++++||.+++| ||++
T Consensus 84 ~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~ 163 (259)
T 3hsq_A 84 DHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDY 163 (259)
T ss_dssp SSCEECTTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTT
T ss_pred CCcEECCCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCC
Confidence 887777755444433332338999999997 6999999999999999999999899999999999999887 8999
Q ss_pred cEEcCCccC
Q 013483 434 SVITDGFVI 442 (442)
Q Consensus 434 ~~v~~~~~i 442 (442)
++|++||+|
T Consensus 164 ~~Vg~~s~V 172 (259)
T 3hsq_A 164 SMVAGLAKV 172 (259)
T ss_dssp CEECSSEEE
T ss_pred CEECCCCEE
Confidence 999998864
No 50
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.68 E-value=3.6e-16 Score=146.66 Aligned_cols=147 Identities=17% Similarity=0.163 Sum_probs=117.1
Q ss_pred cCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEEe-eeEEcCCcEECCCCEEe------------ceEEEC
Q 013483 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-HSVVGIRSRINANVHLK------------DTMMLG 359 (442)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i~-~~~ig~~~~i~~~~~i~------------~~~~~~ 359 (442)
++|.+.+.+++.+++.+.| +++.|. ++.||++|+|+ ++.|. +++||++|.|+++++|+ ..+++|
T Consensus 4 I~p~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG 83 (270)
T 1j2z_A 4 IAKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIG 83 (270)
T ss_dssp BCTTCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEEC
T ss_pred cCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEEC
Confidence 4556666666666666666 455564 78899999998 77774 89999999999999995 567788
Q ss_pred CccccchhhhhhhhcCCC-cceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcC
Q 013483 360 ADFYETDAEVASLLAEGR-VPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILK 432 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~ 432 (442)
+++.+++....+..+... .++.||++|.|. +++|+++|.||+++++++...+..+++||++++||.+++| ||+
T Consensus 84 ~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~ 163 (270)
T 1j2z_A 84 EDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAK 163 (270)
T ss_dssp SSCEECTTCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECT
T ss_pred CCCEECCCeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCC
Confidence 887777655444433211 238999999997 7999999999999999999888899999999999999887 899
Q ss_pred CcEEcCCccC
Q 013483 433 NSVITDGFVI 442 (442)
Q Consensus 433 ~~~v~~~~~i 442 (442)
+++||++|+|
T Consensus 164 ~a~Ig~~s~V 173 (270)
T 1j2z_A 164 GCMIAGKSAL 173 (270)
T ss_dssp TCEECTTCEE
T ss_pred ceEEecCcEe
Confidence 9999999864
No 51
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.67 E-value=4.6e-16 Score=145.81 Aligned_cols=147 Identities=15% Similarity=0.163 Sum_probs=112.2
Q ss_pred cCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEe-------------ceEEE
Q 013483 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLK-------------DTMML 358 (442)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~-------------~~~~~ 358 (442)
++|.+.+.+++.+++.+.| +.+.|. ++.||++|+|+ ++.| .+++||++|.|++++.|+ ..+.+
T Consensus 7 I~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~I 86 (266)
T 3r0s_A 7 IHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVI 86 (266)
T ss_dssp BCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEE
T ss_pred cCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEE
Confidence 3444444455555555554 334443 67888888888 6777 479999999999999996 67888
Q ss_pred CCccccchhhhhhhhcCC-CcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----Ec
Q 013483 359 GADFYETDAEVASLLAEG-RVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----IL 431 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~ 431 (442)
|+++.+.+....+..+.. ..++.||++|.|. +++|+++|+||+++.+++...+.++.+||++++||.+++| ||
T Consensus 87 G~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig 166 (266)
T 3r0s_A 87 GKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVG 166 (266)
T ss_dssp CTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CCCCEECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcEEC
Confidence 888877775444433321 1237899999997 7999999999999999998888889999999999999888 89
Q ss_pred CCcEEcCCccC
Q 013483 432 KNSVITDGFVI 442 (442)
Q Consensus 432 ~~~~v~~~~~i 442 (442)
++++|+++|+|
T Consensus 167 ~~a~Vg~~s~V 177 (266)
T 3r0s_A 167 EGCMIAGASAL 177 (266)
T ss_dssp TTCEECSSCBB
T ss_pred CCCEEccCCeE
Confidence 99999999875
No 52
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.67 E-value=4.2e-16 Score=148.91 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=101.0
Q ss_pred ccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEec----e-----------
Q 013483 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKD----T----------- 355 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~----~----------- 355 (442)
.++|.+.+.+++.+++++.| +++.|. ++.||++|+|+ ++.| .+++||++|.|+++++|+. .
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~ 88 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGH 88 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECT
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECC
Confidence 45556666666666666665 444443 56666666666 5555 3555665555555555532 1
Q ss_pred --------------------EEECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccc
Q 013483 356 --------------------MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEA 414 (442)
Q Consensus 356 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~ 414 (442)
+.+|+++.+++....+..+....++.||++|.|. +++|+++|.||+++++.+...+.++
T Consensus 89 ~a~Ig~~~q~~~~~~~~~~~i~IG~~~~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g~ 168 (305)
T 3t57_A 89 HAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGH 168 (305)
T ss_dssp TCEEEECCCCTTCCTTCCEEEEECSSCEECTTCEEECCSSTTCCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTT
T ss_pred ccEeCccccccceecCCCceEEECCCcccCceEEEeecccccCccEEccCccccceEEEeCceEeCCceEECCCcccCCC
Confidence 4445544444433333332211237888888886 7999999999999999999999999
Q ss_pred eeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 415 DRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 415 ~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
++||+++|||.+++| ||++++|++||+|
T Consensus 169 v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V 201 (305)
T 3t57_A 169 VVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVV 201 (305)
T ss_dssp CEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CEECCceEEcCCCEEcCCeEECCCCEEcCCCeE
Confidence 999999999999987 9999999999875
No 53
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.65 E-value=1e-15 Score=144.69 Aligned_cols=149 Identities=14% Similarity=0.137 Sum_probs=115.5
Q ss_pred cccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEec------------eEE
Q 013483 294 SFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKD------------TMM 357 (442)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~------------~~~ 357 (442)
..++|.+.+.+++.+++++.| +++.|. ++.||++|+|+ ++.| .+++||++|.|++++.|+. .++
T Consensus 23 ~~I~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~ 102 (283)
T 4eqy_A 23 SRIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLV 102 (283)
T ss_dssp CCBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEE
T ss_pred cccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEE
Confidence 456677777777777777777 556654 68899999998 7777 4799999999999999953 677
Q ss_pred ECCccccchhhhhhhhcCC-CcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----E
Q 013483 358 LGADFYETDAEVASLLAEG-RVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----I 430 (442)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i 430 (442)
+|+++.+.+....+..+.. ...+.||++|.|. ++.|+++|.||+++.+++...+.++++||+++|||.+++| |
T Consensus 103 IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~I 182 (283)
T 4eqy_A 103 IGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRI 182 (283)
T ss_dssp ECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEE
Confidence 7877666664433322211 1127888888887 7888899999999999998888889999999999999888 8
Q ss_pred cCCcEEcCCccC
Q 013483 431 LKNSVITDGFVI 442 (442)
Q Consensus 431 ~~~~~v~~~~~i 442 (442)
|++++|++||+|
T Consensus 183 g~~~vvg~~s~V 194 (283)
T 4eqy_A 183 GAHSMLGGASAL 194 (283)
T ss_dssp CTTCEECTTCEE
T ss_pred CCCcEECCCCeE
Confidence 999999998864
No 54
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.64 E-value=2.2e-15 Score=146.08 Aligned_cols=170 Identities=18% Similarity=0.180 Sum_probs=100.0
Q ss_pred eecCChHHHHHH-hhhhhcCCCCccccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcE
Q 013483 271 EDIGTIRSFFEA-NLALTAHPPMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSR 345 (442)
Q Consensus 271 ~di~t~~~~~~a-n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~ 345 (442)
+-+.+|+..+.. .+.+.........+++++.+.+++.+++++.+ .++.|. ++.||++|+|+ ++.| .++.||++|.
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 456677764443 33333333334567777777777777777776 455554 46666666666 5555 4566666666
Q ss_pred ECCCCEEeceEEECCccccchhhhh-------------------------------------hhhcCCCcceEeCCCcEe
Q 013483 346 INANVHLKDTMMLGADFYETDAEVA-------------------------------------SLLAEGRVPVGIGENTKI 388 (442)
Q Consensus 346 i~~~~~i~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~i~~~~~i 388 (442)
|++++.|+..+.+|+++.+..-... .....+. +.||+++.|
T Consensus 154 I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~IGd~v~Ig~~~~I~~~~~~~--~~Ig~~~~I 231 (341)
T 3eh0_A 154 LWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDD--TIIGNGVII 231 (341)
T ss_dssp ECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEECSSCEECTTCEEECCSSSC--EEECTTCEE
T ss_pred ECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEECCCcEECCccEeeccccCc--eEeccceEE
Confidence 6666655554455554433321110 0000000 233333333
Q ss_pred e-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 389 K-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 389 ~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
. ++.|+++|+||+++.++....+.+..+||+++|||.+++| ||++++|+++|+|
T Consensus 232 ~~~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~V 291 (341)
T 3eh0_A 232 DNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMV 291 (341)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTTCEE
T ss_pred CCCCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeCCEE
Confidence 3 3455566666667777766777777889999999999887 8888888888764
No 55
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.63 E-value=2.3e-15 Score=140.89 Aligned_cols=147 Identities=12% Similarity=0.094 Sum_probs=108.9
Q ss_pred cCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEec------------eEEEC
Q 013483 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKD------------TMMLG 359 (442)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~------------~~~~~ 359 (442)
++|.+.+.+++.+++.+.+ +++.|. ++.||++|.|+ ++.| .+++||++|.|++++.|+. .+.+|
T Consensus 8 I~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG 87 (262)
T 2qia_A 8 VHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIG 87 (262)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEEC
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEEC
Confidence 3444455555555555555 344443 68888888888 6777 4799999999999999964 67778
Q ss_pred CccccchhhhhhhhcCCC-cceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcC
Q 013483 360 ADFYETDAEVASLLAEGR-VPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILK 432 (442)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~ 432 (442)
+++.+.+....+..+... .++.||++|.|+ +++|+++|.||+++++++...+.++.+|+++++||.+++| ||+
T Consensus 88 ~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~ 167 (262)
T 2qia_A 88 DRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGA 167 (262)
T ss_dssp SSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECC
Confidence 776665543333222111 237888888887 7888889999999999988888888999999999999887 899
Q ss_pred CcEEcCCccC
Q 013483 433 NSVITDGFVI 442 (442)
Q Consensus 433 ~~~v~~~~~i 442 (442)
+++|++||+|
T Consensus 168 ~~~ig~~s~V 177 (262)
T 2qia_A 168 HVMVGGCSGV 177 (262)
T ss_dssp TCEECSSCEE
T ss_pred CCEEccCCEE
Confidence 9999999864
No 56
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.62 E-value=2.8e-15 Score=140.47 Aligned_cols=148 Identities=15% Similarity=0.129 Sum_probs=110.5
Q ss_pred ccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEe------------ceEEE
Q 013483 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLK------------DTMML 358 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~------------~~~~~ 358 (442)
.++|.+.+.+++.+++.+.| +.+.|. ++.||++|+|+ ++.| .+++||++|.|++++.|+ ..+++
T Consensus 9 ~I~p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~I 88 (265)
T 4e6u_A 9 LIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEI 88 (265)
T ss_dssp CBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEE
T ss_pred eECCCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEE
Confidence 34555556666666666665 445553 68888888888 6777 469999999999999994 37788
Q ss_pred CCccccchhhhhhhhcCC-CcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----Ec
Q 013483 359 GADFYETDAEVASLLAEG-RVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----IL 431 (442)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~ 431 (442)
|+++.+.+....+..+.. ...+.||++|.|. ++.|+++|+||+++.+++...+..+.+||+++|||.+++| ||
T Consensus 89 G~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig 168 (265)
T 4e6u_A 89 GNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKID 168 (265)
T ss_dssp CSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEEC
T ss_pred CCCeEECCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEEC
Confidence 887666654433322211 1127888888887 6888888888999999888888889999999999999887 89
Q ss_pred CCcEEcCCccC
Q 013483 432 KNSVITDGFVI 442 (442)
Q Consensus 432 ~~~~v~~~~~i 442 (442)
++++|++||+|
T Consensus 169 ~~~~i~~~svV 179 (265)
T 4e6u_A 169 SYSMIGGASLI 179 (265)
T ss_dssp TTCEECTTCEE
T ss_pred CCCEEcCCCEE
Confidence 99999998874
No 57
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.62 E-value=5.1e-16 Score=139.38 Aligned_cols=180 Identities=13% Similarity=0.110 Sum_probs=110.5
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
++++.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+|++++... +++ . +
T Consensus 12 ~~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~------~-~--- 71 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSF------L-N--- 71 (201)
T ss_dssp CSCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGG------G-T---
T ss_pred ccCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhc------C-C---
Confidence 456799999999999997 79999999999 9999999999988 9999999987653 111 1 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHH-HHHHHHHcCCcEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMD-FVQNHRQSGADITIS 162 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~-~l~~~~~~~~~~tl~ 162 (442)
+.++..... ..|++++++.+...+. .+.+++++||+ +.+.+ +.+ ++ ..++++
T Consensus 72 ----~~~v~~~~~--------~~g~~~~i~~al~~~~------~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v- 126 (201)
T 2e8b_A 72 ----APVVLDEFE--------ESASIIGLYTALKHAK------EENVFVLSGDLPLMKKETVLYVLE------NFKEPV- 126 (201)
T ss_dssp ----CCEEECCCS--------SCCHHHHHHHHHHHCS------SSEEEEEETTCTTCCHHHHHHHHH------TCCSSE-
T ss_pred ----ceEEecCCC--------CCCcHHHHHHHHHHcC------CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEE-
Confidence 222221111 2599999999998875 37999999999 44444 455 44 111111
Q ss_pred EeecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCC
Q 013483 163 CLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFP 242 (442)
Q Consensus 163 ~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~ 242 (442)
... +|+ .....|+| |+++++..+.+....
T Consensus 127 ---------------~~~-~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~ 155 (201)
T 2e8b_A 127 ---------------SVA-KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKK 155 (201)
T ss_dssp ---------------EEE-ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHT
T ss_pred ---------------Eec-CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHc
Confidence 000 010 12467999 999877544321111
Q ss_pred CCcccccchhhhcccccceEEEEec--ceee--ecCChHHHHHHhhhh
Q 013483 243 TANDFGSEIIPASANEQFLKAYLFN--DYWE--DIGTIRSFFEANLAL 286 (442)
Q Consensus 243 ~~~~~~~~~l~~~i~~~~i~~~~~~--g~~~--di~t~~~~~~an~~~ 286 (442)
... .+..+++...+..+.++ +.|. |+|||+||.++++.+
T Consensus 156 g~~-----~~~~~l~~~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 156 GDY-----RIWALLKDVGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp TCC-----CHHHHHHHHCCEEEECCGGGGGGGCCSCCC----------
T ss_pred CCc-----hHHHHHHHCCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 111 22233333345566663 5789 999999999887654
No 58
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.61 E-value=9.4e-15 Score=142.99 Aligned_cols=173 Identities=18% Similarity=0.203 Sum_probs=101.6
Q ss_pred eeecCChHHHHHHhhhhhcCC-CCccccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCc
Q 013483 270 WEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRS 344 (442)
Q Consensus 270 ~~di~t~~~~~~an~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~ 344 (442)
++-+.+|+..+.....++... .....+++.+.+.+++.+++++.| +++.|. ++.||++|+|+ ++.| .++.||++|
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~ 174 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGG 174 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCc
Confidence 445566665544333333332 234466777777777777777666 445554 56666666665 5555 356666666
Q ss_pred EECCCCEEeceEEECCccccchhhhh----------------------hhhcCC-------------CcceEeCCCcEee
Q 013483 345 RINANVHLKDTMMLGADFYETDAEVA----------------------SLLAEG-------------RVPVGIGENTKIK 389 (442)
Q Consensus 345 ~i~~~~~i~~~~~~~~~~~~~~~~~~----------------------~~~~~~-------------~~~~~i~~~~~i~ 389 (442)
.|++++.|++.+.+|+++.+..-... ...+++ ...+.||+++.|.
T Consensus 175 ~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~ 254 (372)
T 3pmo_A 175 WLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDVEIGANTTIDRGALSDTLIGNGVKLD 254 (372)
T ss_dssp EECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSSCEECTTCEEECCSSSCEEECTTCEEC
T ss_pred ccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCCCEECCCcEEccCcccceEECCCCEEC
Confidence 66666666666656655444321110 000000 0003333333333
Q ss_pred -eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 390 -ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 390 -~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
++.|+++|+||++|.+.+...+.+..+||++++||.+++| ||++++|+++++|
T Consensus 255 ~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~V 313 (372)
T 3pmo_A 255 NQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTMV 313 (372)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCEE
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCEE
Confidence 3455566677777777777777778899999999999887 8888888888764
No 59
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.61 E-value=6.2e-15 Score=143.65 Aligned_cols=173 Identities=17% Similarity=0.153 Sum_probs=95.3
Q ss_pred eeeecCChHHHH-HHhhhhhcCCCCccccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCC
Q 013483 269 YWEDIGTIRSFF-EANLALTAHPPMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIR 343 (442)
Q Consensus 269 ~~~di~t~~~~~-~an~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~ 343 (442)
.++-+.+|+..+ ++.+.+...... ..++|.+.+.+++.+++++.+ +++.|. ++.||++|+|+ ++.| .+++||++
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~~-~~i~p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~ 156 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKISS-TGIESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKD 156 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCCC-CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS
T ss_pred cEEEECCHHHHHHHHHHHhcccccc-CeeCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 356677777544 333333322222 556677767666666666666 344443 45666666665 4555 35666666
Q ss_pred cEECCCCEEeceEEECCccccchhhhhhhhc------C-------CCcceEeCCCcEe----------------------
Q 013483 344 SRINANVHLKDTMMLGADFYETDAEVASLLA------E-------GRVPVGIGENTKI---------------------- 388 (442)
Q Consensus 344 ~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~~~i~~~~~i---------------------- 388 (442)
|.|++++.|+..+++|+++.+.+-......+ . ....+.||++|.|
T Consensus 157 ~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v~IG~~~~I~~g~~~~t~Ig~~~~I 236 (357)
T 4e79_A 157 CFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVLIGNDVRIGSNCSIDRGALDNTILEDGVII 236 (357)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCCEEECTTCEECTTCEECCCSSSCEEECTTCEE
T ss_pred CEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCcEEEcCCcEEccccEEeccccCCccccCCccc
Confidence 6666666555555555544433211100000 0 0001344444444
Q ss_pred e-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 389 K-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 389 ~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
. ++.|+++|+||++|.+++...+....+||++++||.+++| ||++++|++++.|
T Consensus 237 ~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~V 296 (357)
T 4e79_A 237 DNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSMV 296 (357)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTCEE
T ss_pred CCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecCEE
Confidence 2 2444555666666666666666667788888888888776 7788888877653
No 60
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.59 E-value=3.1e-15 Score=133.78 Aligned_cols=186 Identities=14% Similarity=0.145 Sum_probs=109.5
Q ss_pred ceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCC
Q 013483 8 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGD 87 (442)
Q Consensus 8 ~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (442)
+|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++||+++..+.+.+++ . .+
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~------~----~~- 61 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLL------M----DQ- 61 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGC------T----TS-
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHh------c----CC-
Confidence 4889999999999997 49999999999 9999999999887 88888887644333222 1 11
Q ss_pred ceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHHHHHHHHHcCCcEEEEEee
Q 013483 88 GCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITISCLP 165 (442)
Q Consensus 88 ~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~~~~~~~~~tl~~~~ 165 (442)
+ ++.... +..|++++++.++..+.. .+.+++++||+ +++.+ +.++++.+ +.+.++++...
T Consensus 62 --~-~v~~~~--------~~~G~~~si~~al~~~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~- 123 (197)
T 3d5n_A 62 --I-VIYNPF--------WNEGISTSLKLGLRFFKD-----YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH- 123 (197)
T ss_dssp --C-EEECTT--------GGGCHHHHHHHHHHHTTT-----SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE-
T ss_pred --E-EEECCC--------CCCCHHHHHHHHHHhhcc-----CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe-
Confidence 2 222111 125899999999988853 36899999999 55544 67777766 44444332221
Q ss_pred cCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceeeeeEEEEeHHHHHHHHhhhCCCCc
Q 013483 166 MDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIASMGVYLFKKEILLNLLRWRFPTAN 245 (442)
Q Consensus 166 ~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~~~~~~ 245 (442)
+++ .. .-.+|+++++..+. .. ....
T Consensus 124 ----------------~g~-------~~------------------------------~P~~~~~~~l~~l~-~l-~g~~ 148 (197)
T 3d5n_A 124 ----------------KGE-------RG------------------------------NPVLISKSLFNEIE-KL-RGDV 148 (197)
T ss_dssp ----------------TTE-------EC------------------------------SCEEEEHHHHHHHH-HC-CTTC
T ss_pred ----------------CCc-------cc------------------------------CCEEECHHHHHHHH-cc-CCCc
Confidence 010 00 01277888876554 32 2211
Q ss_pred ccccchhhhcccccceEEEEec--ceeeecCChHHHHHHhhhhhcC
Q 013483 246 DFGSEIIPASANEQFLKAYLFN--DYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 246 ~~~~~~l~~~i~~~~i~~~~~~--g~~~di~t~~~~~~an~~~l~~ 289 (442)
.. ..++... +..+..+..+ +.|.||+||+||..++..+...
T Consensus 149 ~~-~~~l~~~--~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~~~ 191 (197)
T 3d5n_A 149 GA-RVILNKI--KIEELCFIECSEGVLIDIDKKEDLMRLRDFHPLE 191 (197)
T ss_dssp CT-HHHHTTS--CGGGEEEEECCGGGTCCTTTC-------------
T ss_pred cH-HHHHHhC--ccCeEEEEcCCCCcccCCCCHHHHHHHHHhhccc
Confidence 11 1122211 2345555553 5789999999999988766543
No 61
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.58 E-value=3.2e-14 Score=143.47 Aligned_cols=213 Identities=16% Similarity=0.166 Sum_probs=137.7
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceee---cCccceehhhhhhhhh--------cC----CcEEEEEeccChhhHH
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPI---GGAYRLIDVPMSNCIN--------SG----INKVYILTQYNSASLN 70 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi---~g~~pli~~~l~~l~~--------~g----i~~i~iv~~~~~~~i~ 70 (442)
..+|.+||||||.||||+ .+.||+|+|| .|+ |+|++.++++.+ .| +..+++...+..+.+.
T Consensus 100 ~~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~ 175 (505)
T 1jv1_A 100 QNKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTK 175 (505)
T ss_dssp TTCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHH
T ss_pred cCceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHH
Confidence 367999999999999996 6899999999 789 999999999876 36 6666666667788999
Q ss_pred HHHHhhccCCCCcccCCceEEEecccc-------cCC-----cCCCccccChHHHHHHhhh--hhcCCCCCccCeEEEEc
Q 013483 71 RHLARAYNYGSGVTFGDGCVEVLAATQ-------TPG-----EAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLILS 136 (442)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~v~i~~~~~-------~~~-----~~~~~~~~G~~~al~~~~~--~l~~~~~~~~~~~lv~~ 136 (442)
+++.+...|+-.. ..+.+..... ... ..-...|.|+++.+..+.. .++.+...+.++|+|.+
T Consensus 176 ~~f~~~~~fGl~~----~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n 251 (505)
T 1jv1_A 176 EFFTKHKYFGLKK----ENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYC 251 (505)
T ss_dssp HHHHHTGGGGSCG----GGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEE
T ss_pred HHHHhhhhcCCCc----CceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEE
Confidence 9997632232110 0121111000 000 0001236799999876642 11110001247999999
Q ss_pred CCee-eecCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcCCCce--EEEEeCCCcccccccccccccccccccc
Q 013483 137 GDHL-YRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINNEGRV--LSFSEKPKGKDLKAMAVDTTVLGLSKQE 213 (442)
Q Consensus 137 gD~i-~~~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~~~~v--~~i~ek~~~~~~~~~~~~~~~~~~~~~~ 213 (442)
+|.+ +......++.+|..+++++++.+.+... ..+.+|.+..+ +|++ +.+.|+|..... . .++.
T Consensus 252 ~Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~-~~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~---~-------~~~~- 318 (505)
T 1jv1_A 252 VDNILVKVADPRFIGFCIQKGADCGAKVVEKTN-PTEPVGVVCRV-DGVYQVVEYSEISLATAQ---K-------RSSD- 318 (505)
T ss_dssp TTBTTCCTTCHHHHHHHHHTTCSEEEEEEECCS-TTCSCCEEEEE-TTEEEEECGGGSCHHHHH---C-------BCTT-
T ss_pred CCccccccchHHHHHHHHHcCCCEEEEEEEccC-CccCcceEEEE-CCeEEEEEEeeCCHHHhh---h-------cccc-
Confidence 9995 7777778999999999999998876322 15788988875 4554 444444432110 0 0000
Q ss_pred cccccceeeeeEEEEeHHHHHHHHhh
Q 013483 214 AEEKPYIASMGVYLFKKEILLNLLRW 239 (442)
Q Consensus 214 ~~~~~~l~~~Giy~~~~~~l~~~l~~ 239 (442)
.....+..++++|+|+.+++.++.+.
T Consensus 319 g~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 319 GRLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp SSBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccccceeeEEEEEecHHHHHHHHHh
Confidence 11123578999999999999877653
No 62
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.58 E-value=9.9e-15 Score=130.88 Aligned_cols=111 Identities=15% Similarity=0.177 Sum_probs=83.3
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
|+++.+||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|++++..+.+ .+ + +
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~----~~-~----~--- 65 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIY----QA-S----G--- 65 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHH----HT-T----S---
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHH----hh-c----C---
Confidence 557999999999999997 379999999999 999999999985 5899999998765332 11 1 1
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHHHHHH
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQN 151 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~ 151 (442)
+.++...... ..|++.+++.+...+. .+.+++++||+ ++..+ +.++++.
T Consensus 66 ----~~~v~~~~~~-------~~G~~~si~~~l~~~~------~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 66 ----LKVIEDSLAD-------YPGPLAGMLSVMQQEA------GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp ----CCEECCCTTC-------CCSHHHHHHHHHHHCC------SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred ----CeEEecCCCC-------CCCHHHHHHHHHHhCC------CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 1222211110 1489999999998875 37899999999 56655 5677654
No 63
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.55 E-value=2.3e-15 Score=138.84 Aligned_cols=142 Identities=20% Similarity=0.241 Sum_probs=75.8
Q ss_pred cccceEEEEecce----eeecCChHHHHHHhhhhhcCCCCc-----cccCCCCcccccCccCCCceecCCceeeeEEcCC
Q 013483 257 NEQFLKAYLFNDY----WEDIGTIRSFFEANLALTAHPPMF-----SFYDATKPIYTSRRNLPPSKIDDSKIVDSIISHG 327 (442)
Q Consensus 257 ~~~~i~~~~~~g~----~~di~t~~~~~~an~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~ 327 (442)
...+++++...++ |.|+++ |+++|+.++...... ............+.+.+++.+.+ ++.||++
T Consensus 37 ~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~----~v~Ig~~ 109 (240)
T 3r8y_A 37 ETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRD----HVEIGDN 109 (240)
T ss_dssp TTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBS----SCEECTT
T ss_pred CcceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECC----CcEECCC
Confidence 3455666665555 888887 888988876432100 00000001111223333333321 3555555
Q ss_pred CEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeee---------eEeCCC
Q 013483 328 SFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE---------CIIDKN 396 (442)
Q Consensus 328 ~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~---------~~ig~~ 396 (442)
|+|+ .+.| .+++||++|.|++++.|++.+++|++ |.|+++|.+.+ ++||++
T Consensus 110 ~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~------------------~~I~~~~~i~~~~~~~~~~~~~Ig~~ 171 (240)
T 3r8y_A 110 AVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKN------------------CHVGAGAVLAGVIEPPSAKPVIVEDD 171 (240)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTT------------------CEECTTCEECCCCSCTTSCCCEECTT
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEECCC------------------cEECCCcEECCCccCCCCCCcEECCC
Confidence 5554 4444 45666666666666666655555655 66666666654 666666
Q ss_pred cEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 397 ARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 397 ~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
|.||.++++.. ..+||+++.|++|++|
T Consensus 172 ~~IG~~~~I~~------~~~Ig~~~~I~~gsvV 198 (240)
T 3r8y_A 172 VVIGANVVVLE------GVTVGKGAVVAAGAVV 198 (240)
T ss_dssp CEECTTCEECT------TCEECTTCEECTTCEE
T ss_pred CEECCCCEECC------CcEECCCCEECCCCEE
Confidence 66666666642 3345555555555554
No 64
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.55 E-value=2.4e-14 Score=139.50 Aligned_cols=49 Identities=33% Similarity=0.451 Sum_probs=31.3
Q ss_pred EeCCCcEee-eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 381 GIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 381 ~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
.||++|.|. ++.|..+++||++|.++....+..+.+|++++.|+.++.|
T Consensus 247 ~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~V 296 (357)
T 4e79_A 247 HIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSMV 296 (357)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTCEE
T ss_pred EECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecCEE
Confidence 333333333 3444444666777777766677777788888888887776
No 65
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.53 E-value=6.9e-13 Score=132.95 Aligned_cols=263 Identities=13% Similarity=0.113 Sum_probs=155.0
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeec-CccceehhhhhhhhhcCCc-----EEEEEe-ccChhhHHHHHH-hhcc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINSGIN-----KVYILT-QYNSASLNRHLA-RAYN 78 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~-g~~pli~~~l~~l~~~gi~-----~i~iv~-~~~~~~i~~~~~-~~~~ 78 (442)
.++.+||||||.||||+ .+.||+|+||+ |+ |+|++.++++.+.+.. .++|.+ .+..+.+.++++ +...
T Consensus 74 ~k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 74 QSTVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW 149 (505)
T ss_dssp HTEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH
T ss_pred hcceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc
Confidence 37899999999999999 77999999999 99 9999999999987633 455555 455778889987 4221
Q ss_pred CCC---Ccc-cCCceEEEecccc------cCCcCCCccccChHHHHHHh-----hhhhcCCCCCccCeEEEEcCCeeee-
Q 013483 79 YGS---GVT-FGDGCVEVLAATQ------TPGEAGKRWFQGTADAVRQF-----HWLFEDPRNKVIEDVLILSGDHLYR- 142 (442)
Q Consensus 79 ~~~---~~~-~~~~~v~i~~~~~------~~~~~~~~~~~G~~~al~~~-----~~~l~~~~~~~~~~~lv~~gD~i~~- 142 (442)
|+- ... |..+.+..+..+. ...+.-...|.|+|+++... ++.+.. .+.++++|.++|.+..
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~---~G~e~i~V~N~DNL~~~ 226 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVE---QGYRYMFVSNGDNLGAT 226 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHH---TTCCEEEEECTTCTTCC
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHh---cCCCEEEEEECCccccc
Confidence 221 111 2111111111000 00000122367999998754 222211 1247999999999874
Q ss_pred cCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEc------CCCc-------eEEEEeCCCcccccccccccccccc
Q 013483 143 MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKIN------NEGR-------VLSFSEKPKGKDLKAMAVDTTVLGL 209 (442)
Q Consensus 143 ~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d------~~~~-------v~~i~ek~~~~~~~~~~~~~~~~~~ 209 (442)
.++ .++.+|.++++++++.+.+...+ ...+|++..+ .+|+ + .+.|....+.... + .
T Consensus 227 ~D~-~llg~~~~~~ad~~~~v~~k~~~-d~~~Gvl~~~~~~~~~~dg~~nvEyn~~-~llEyse~p~e~~---~-----~ 295 (505)
T 2oeg_A 227 IDK-RVLAYMEKEKIDFLMEVCRRTES-DKKGGHLARQTVYVKGKDGQPDAEKRVL-LLRESAQCPKADM---E-----S 295 (505)
T ss_dssp CCH-HHHHHHHHHTCSEEEEEEECCTT-CCSSEEEEEEEEEECCSSSCCCEEEEEE-EEEEGGGSCGGGH---H-----H
T ss_pred cCH-HHHHHHHhcCCcEEEEEEEecCC-ccceeEEEEecccccccCCccccccCce-eEEEeccCChhhh---h-----c
Confidence 456 88999999999999998887652 2567777662 4566 4 2444332221100 0 0
Q ss_pred cccccccccceeeeeEEEEeHHHHHHHHhhh-----CCCC------c---------ccccchhhhcccc-cceEEEEec-
Q 013483 210 SKQEAEEKPYIASMGVYLFKKEILLNLLRWR-----FPTA------N---------DFGSEIIPASANE-QFLKAYLFN- 267 (442)
Q Consensus 210 ~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~~-----~~~~------~---------~~~~~~l~~~i~~-~~i~~~~~~- 267 (442)
... . ..-.+.++....|+-+.+.+.++.. .+.. . ...+.++.++++- .+..++.++
T Consensus 296 ~~g-~-~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~~~~~~~~V~R 373 (505)
T 2oeg_A 296 FQD-I-NKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMFESASAIVVPR 373 (505)
T ss_dssp HHC-T-TTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSCTTCEEEECCG
T ss_pred ccC-c-cccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhcCcceEEEecc
Confidence 000 0 1123468899999999988877751 1110 0 0001122222221 123333332
Q ss_pred ceeeecCChHHHHHHhhhhhcC
Q 013483 268 DYWEDIGTIRSFFEANLALTAH 289 (442)
Q Consensus 268 g~~~di~t~~~~~~an~~~l~~ 289 (442)
..|.-+.+..+++.+.+++...
T Consensus 374 ~~FsPvKn~~dl~~~~sdly~~ 395 (505)
T 2oeg_A 374 SRFAPVKTCADLLALRSDAYVV 395 (505)
T ss_dssp GGCCCCSSHHHHHHHHSTTEEE
T ss_pred ceeecccCCCCHHHHHHHHHhh
Confidence 3567777888888887776543
No 66
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.52 E-value=6.7e-14 Score=131.66 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=25.4
Q ss_pred ceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 414 ADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 414 ~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
..+||+++|||.+++| ||++++|++||+|
T Consensus 170 ~v~Ig~~~~IG~~~~I~~g~~IG~~~~IgagsvV 203 (273)
T 3fs8_A 170 GVTIELFAVIAARSVVLPGIHINEDALVGAGAVV 203 (273)
T ss_dssp CCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CcEECCCeEEcCCCEEcCCCEECCCCEECCCCEE
Confidence 3689999999999887 8999999999875
No 67
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.51 E-value=8.1e-14 Score=123.97 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=72.5
Q ss_pred eEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcE
Q 013483 322 SIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNAR 398 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ 398 (442)
+.|++++.|. .+.| .++.||++|.|++++.|++.+.+|++ +.|+++|.|. +++||++|.
T Consensus 16 ~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~------------------~~I~~~~~I~~~~~Ig~~~~ 77 (192)
T 3mqg_A 16 ARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNR------------------VKIQNNVSVYDNVFLEDDVF 77 (192)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSS------------------CEECTTCEECTTEEECTTCE
T ss_pred CEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCC------------------cEEcCCcEEeCCCEECCCCE
Confidence 4455555554 3334 36778888888888888777777776 7888888885 688888888
Q ss_pred ECCCeEEccCCC---------cccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 399 IGKNVIIANSEG---------IQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 399 ig~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
||+++++.+... .....+||+++|||.+++| ||++++|++||+|
T Consensus 78 ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV 135 (192)
T 3mqg_A 78 CGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVV 135 (192)
T ss_dssp ECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ECCceEEecccCCccccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEE
Confidence 888877765321 1134578888888888776 7888888888764
No 68
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.51 E-value=9.5e-14 Score=128.52 Aligned_cols=117 Identities=15% Similarity=0.279 Sum_probs=89.0
Q ss_pred CCCCcccccCccCCCceecCCceeeeEEcCCCEEe-ceEEe-----eeEEcCCcEECCCCEEece---------------
Q 013483 297 DATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLKDT--------------- 355 (442)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~-----~~~ig~~~~i~~~~~i~~~--------------- 355 (442)
+....+.+++.+.+++.+.+ ++.||++|.|+ .+.|. +++||++|.|++++.|...
T Consensus 57 ~~~~~I~~~~~I~~~a~I~g----~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~ 132 (247)
T 1qre_A 57 PSAPVIDPTAYIDPQASVIG----EVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIV 132 (247)
T ss_dssp CCCCEECTTCEECTTCEEEE----SEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCE
T ss_pred CCCcEECCCcEECCCCEEeC----CcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCccccccee
Confidence 34445555566666655532 56777777777 55553 3499999999999999753
Q ss_pred --------EEECCccccchhhhhhhhcCCCcceEeCCCcEeee-eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccC
Q 013483 356 --------MMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE-CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSG 426 (442)
Q Consensus 356 --------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~-~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~ 426 (442)
+++|++ +.||++|.|.+ ++||++|.||+++++.+ .+||++++||+|
T Consensus 133 ~~~~~~~~v~IG~~------------------v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-------v~Ig~~~~Igag 187 (247)
T 1qre_A 133 EVDGKEYAVYIGNN------------------VSLAHQSQVHGPAAVGDDTFIGMQAFVFK-------SKVGNNCVLEPR 187 (247)
T ss_dssp EETTEEESEEECTT------------------CEECTTCEEEEEEEECTTCEECTTCEEEE-------EEECTTCEECTT
T ss_pred eccCccCceEECCC------------------CEECCCCEEcCCcEECCCCEECCCCEEec-------eEECCCCEECCC
Confidence 677776 88999999986 99999999999999863 678888888888
Q ss_pred cEE----EcCCcEEcCCccC
Q 013483 427 VTV----ILKNSVITDGFVI 442 (442)
Q Consensus 427 ~~v----i~~~~~v~~~~~i 442 (442)
++| |+++++|++|++|
T Consensus 188 svV~~~~I~~~~~v~~g~vv 207 (247)
T 1qre_A 188 SAAIGVTIPDGRYIPAGMVV 207 (247)
T ss_dssp CEEESCEECTTBEECTTCEE
T ss_pred CEECCeEeCCCCEECCCCEE
Confidence 777 7888888888753
No 69
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.51 E-value=3.5e-14 Score=138.37 Aligned_cols=196 Identities=14% Similarity=0.141 Sum_probs=124.5
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhh-cCCcEEEEEeccChhhHHHHHHhhccCCCCccc
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCIN-SGINKVYILTQYNSASLNRHLARAYNYGSGVTF 85 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~-~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~ 85 (442)
+++.+||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ ..+.+.+++ .+
T Consensus 2 mki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~-------~~--- 66 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFT-------KN--- 66 (371)
T ss_dssp CCEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTC-------SS---
T ss_pred CccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHh-------CC---
Confidence 46899999999999998 4579999999999 999999999998 58999999998 433332221 11
Q ss_pred CCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeec-CHHHHHHHHHHcCCcEEEEE
Q 013483 86 GDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRM-DYMDFVQNHRQSGADITISC 163 (442)
Q Consensus 86 ~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~-~l~~~l~~~~~~~~~~tl~~ 163 (442)
+.++. .. .|..++++.++..+. .+.+++++||. +++. .+.++++.+.+. +.++.+
T Consensus 67 ----v~~v~--~g---------~g~~~sv~~aL~~l~------~d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~ 123 (371)
T 1w55_A 67 ----YEFIE--GG---------DTRAESLKKALELID------SEFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPA 123 (371)
T ss_dssp ----SEEEE--CC---------SSHHHHHHHHHTTCC------SSEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEE
T ss_pred ----CEEEe--CC---------CChHHHHHHHHHhcC------CCeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEE
Confidence 22221 11 368899999887775 37899999999 4444 478888877654 334444
Q ss_pred eecCCCcCCcccEEEEcCCCceEEEEeCCCcccccccccccccccccccccccccceee-eeEEEEeHHHHHHHHhhhCC
Q 013483 164 LPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIAS-MGVYLFKKEILLNLLRWRFP 242 (442)
Q Consensus 164 ~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Giy~~~~~~l~~~l~~~~~ 242 (442)
.+..+. +.. + .+.+... .+.. ..-+.|+.+.+..+++...
T Consensus 124 ~~~~d~-------vk~-----v---~~t~~r~-----------------------~l~~~~~P~~f~~~~l~~~~~~~~- 164 (371)
T 1w55_A 124 LKVADT-------TLF-----D---NEALQRE-----------------------KIKLIQTPQISKTKLLKKALDQNL- 164 (371)
T ss_dssp ECCCSC-------EEE-----T---TEEECGG-----------------------GCCEECSCEEEEHHHHHHHTSSCC-
T ss_pred EEeecC-------eee-----e---eeecCcc-----------------------ceeecCCcceecHHHHHHHHHhcc-
Confidence 443321 000 0 0001100 1111 1235688887766554311
Q ss_pred CCcccccchhhhcc-cccceEEEEecceeeecCChHHHHHHh
Q 013483 243 TANDFGSEIIPASA-NEQFLKAYLFNDYWEDIGTIRSFFEAN 283 (442)
Q Consensus 243 ~~~~~~~~~l~~~i-~~~~i~~~~~~g~~~di~t~~~~~~an 283 (442)
. + .+....+. .+.++..++.++.|.||+||+||..|+
T Consensus 165 --~-~-td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 165 --E-F-TDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp --C-C-SSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred --c-c-cCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 0 1 11111111 135677777778899999999999887
No 70
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.51 E-value=1.8e-13 Score=123.14 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=82.9
Q ss_pred eEEEEEeCCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEEEEEeccChhhHHHHHHhhccCCCCcccCCc
Q 013483 9 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDG 88 (442)
Q Consensus 9 ~~aVILAaG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (442)
|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++||+++ .+.+. .+.+.+ +
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~~--------~-- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSRY--------E-- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTTS--------C--
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHhc--------C--
Confidence 689999999999997 79999999999 9999999999987 88888863 23332 332211 1
Q ss_pred eEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHHHHHHHHHcCCcEEE
Q 013483 89 CVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQNHRQSGADITI 161 (442)
Q Consensus 89 ~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~~~~~~~~~~tl 161 (442)
+.++..... -.|...+++.++..+ . +.+ +++||+ +++.+ +.++++.+.+.+.++++
T Consensus 60 -~~~v~d~~~--------~~G~~~si~~gl~~~-~------~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 60 -AEFIWDLHK--------GVGSIAGIHAALRHF-G------SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp -SCEECCTTC--------CCSHHHHHHHHHHHH-S------SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred -CeEEecCCC--------CCChHHHHHHHHHHc-C------CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 122222211 147889999998877 3 688 999999 55555 67888877655555443
No 71
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.46 E-value=1.2e-13 Score=138.55 Aligned_cols=100 Identities=14% Similarity=0.219 Sum_probs=80.1
Q ss_pred eeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEE
Q 013483 321 DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARI 399 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~i 399 (442)
++.||++|.|+ .+.|.+++||++|.|+++|.|.++++..+ |.|++++.|.+++||++|.|
T Consensus 291 ~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~-------------------~~Ig~~a~I~gv~IGd~v~I 351 (496)
T 3c8v_A 291 DTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERN-------------------CVTAHGGKIINAHLGDMIFT 351 (496)
T ss_dssp SCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEES-------------------CEECTTCEEESEEEEETCEE
T ss_pred CeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCC-------------------CEECCCcEEcCceECCCcEE
Confidence 67888888888 67778899999999999999997665444 89999999999999999999
Q ss_pred CCCeEEccCCCcccceeeCCCeEEccCcEEE-cCCcEEcCCcc
Q 013483 400 GKNVIIANSEGIQEADRSAEGFYIRSGVTVI-LKNSVITDGFV 441 (442)
Q Consensus 400 g~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi-~~~~~v~~~~~ 441 (442)
|+++++.... ...++||+++.||.|+.|. .+++.|+++++
T Consensus 352 G~~a~I~~~~--~~~v~IG~~a~IGagsvV~~~~~~~I~~~s~ 392 (496)
T 3c8v_A 352 GFNSFLQGSE--SSPLKIGDGCVVMPHTIIDLEEPLEIPAGHL 392 (496)
T ss_dssp CTTCEEECCS--SSCEEECTTCEECTTCEEECSSCEEECSSEE
T ss_pred CCCCEEeCCC--CcceEECCCCEECCCCEEecCCCcEeCCCCE
Confidence 9999998642 1246888888888886663 25566666654
No 72
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.45 E-value=8e-13 Score=115.45 Aligned_cols=111 Identities=20% Similarity=0.264 Sum_probs=85.5
Q ss_pred CCCcccccCccCCCceecCCceeeeEEcCCCEEe-ceEEe----eeEEcCCcEECCCCEEec----eEEECCccccchhh
Q 013483 298 ATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKD----TMMLGADFYETDAE 368 (442)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~----~~~ig~~~~i~~~~~i~~----~~~~~~~~~~~~~~ 368 (442)
..+.+.+++.+.+++.+.+ ++.||++|.|+ .+.+. .++||++|.|++++.|.. .+++|++
T Consensus 9 ~~~~i~~~~~I~~~a~i~g----~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~------- 77 (173)
T 1v3w_A 9 KKPRIHPSAFVDENAVVIG----DVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEY------- 77 (173)
T ss_dssp BCCEECTTCEECTTSEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSS-------
T ss_pred CCCEECCCCEECCCCEEeC----CEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCC-------
Confidence 3345555666666665533 57788888887 56663 389999999999999985 3788887
Q ss_pred hhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEE
Q 013483 369 VASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVI 436 (442)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v 436 (442)
+.|+++|.|.+++||++|.||+++++.+ ..+||++++||++++| |++++++
T Consensus 78 -----------~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~------~~~Ig~~~~Ig~~s~V~~~~~i~~~~~v 133 (173)
T 1v3w_A 78 -----------VTIGHNAMVHGAKVGNYVIIGISSVILD------GAKIGDHVIIGAGAVVPPNKEIPDYSLV 133 (173)
T ss_dssp -----------CEECTTCEEESCEECSSEEECTTCEECT------TCEECSSEEECTTCEECTTCEECTTEEE
T ss_pred -----------CEECCCCEECCCEECCCCEECCCCEEeC------CCEECCCCEECCCCEECCCcEeCCCcEE
Confidence 8999999999999999999999999875 4678888888888665 4555555
No 73
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.45 E-value=8e-13 Score=117.18 Aligned_cols=114 Identities=22% Similarity=0.333 Sum_probs=86.8
Q ss_pred CCcccccCccCCCceecCCceeeeEEcCCCEEe-ceEE----eeeEEcCCcEECCCCEEec-----------eEEECCcc
Q 013483 299 TKPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFI----EHSVVGIRSRINANVHLKD-----------TMMLGADF 362 (442)
Q Consensus 299 ~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i----~~~~ig~~~~i~~~~~i~~-----------~~~~~~~~ 362 (442)
.+.+..++.+.+++.+.+ ++.||++|.|+ .+.| ..++||++|.|++++.|.. .+++|++
T Consensus 19 ~~~ig~~~~I~~~~~i~~----~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~- 93 (189)
T 3r1w_A 19 SPKLGERVFVDRSSVIIG----DVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDD- 93 (189)
T ss_dssp CCEECTTCEECTTCEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSS-
T ss_pred CCEECCCcEECCCCEEee----eeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCC-
Confidence 345555666666666533 57778888887 6666 2459999999999999977 5677876
Q ss_pred ccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEEEcCCcEEcCCcc
Q 013483 363 YETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFV 441 (442)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~~v~~~~~ 441 (442)
+.|+++|.|.+++||++|.||+++++.. ..+|+++++||++++| .++..|+++++
T Consensus 94 -----------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~------~v~Ig~~~~Ig~~s~V-~~g~~i~~~~v 148 (189)
T 3r1w_A 94 -----------------VTIGHQAMLHGCTIGNRVLIGMKSMIMD------GAIVEDEVIVAAGATV-SPGKVLESGFV 148 (189)
T ss_dssp -----------------EEECTTCEEESCEECSSEEECTTCEECT------TCEECSSCEECTTCEE-CTTCEECTTEE
T ss_pred -----------------CEECCCCEEeCcEECCCcEECCCCEEcC------CCEECCCCEEccCCEE-CCCCEeCCCCE
Confidence 9999999999999999999999999974 5678888888888655 45555555554
No 74
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.45 E-value=6.2e-13 Score=118.41 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=74.2
Q ss_pred cCccCCCcee-cCCcee-eeEEcCCCEEe-ceEEe----eeEEcCCcEECCCCEEece----------------EEECCc
Q 013483 305 SRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKDT----------------MMLGAD 361 (442)
Q Consensus 305 ~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i~----~~~ig~~~~i~~~~~i~~~----------------~~~~~~ 361 (442)
+++|++.+++ +++.|. ++.||++|+|+ ++.|. +++||++|.|++++.|.+. +++|++
T Consensus 12 ~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~ 91 (194)
T 3tv0_A 12 SVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTN 91 (194)
T ss_dssp CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSS
T ss_pred CCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCc
Confidence 4444455544 344443 68888888888 66662 4789999999999999653 334443
Q ss_pred cccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEEEcCCcEEcCCc
Q 013483 362 FYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGF 440 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~~v~~~~ 440 (442)
+.|++++.+.++.||++|.||++++|.. .++||+++.||+|++| .+++.|++++
T Consensus 92 ------------------~~i~~~~~i~~~~Ig~~~~Ig~~~~I~~------gv~IG~~~~IgagsvV-~~~~~Ip~~s 145 (194)
T 3tv0_A 92 ------------------NVFEVGCYSQAMKMGDNNVIESKAYVGR------NVILTSGCIIGACCNL-NTFEVIPENT 145 (194)
T ss_dssp ------------------CEECTTCEECCSEECSSCEECTTCEECT------TEEECSSCEECTTCEE-CCCEEECTTE
T ss_pred ------------------ceEecceeEeeeeecccceecceeeECC------eEEECCCCEECCCCEE-CCCcEECCCC
Confidence 5666666667777778888887777764 5678888888888665 3344444443
No 75
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.44 E-value=9.9e-13 Score=116.38 Aligned_cols=116 Identities=18% Similarity=0.278 Sum_probs=88.1
Q ss_pred CCCCcccccCccCCCceecCCceeeeEEcCCCEEe-ceEEe----eeEEcCCcEECCCCEE-----------eceEEECC
Q 013483 297 DATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHL-----------KDTMMLGA 360 (442)
Q Consensus 297 ~~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~----~~~ig~~~~i~~~~~i-----------~~~~~~~~ 360 (442)
...+.+..++.+.+++.+.+ ++.||++|.|+ .+.|. .++||++|.|++++.| ...+++|+
T Consensus 13 ~~~~~ig~~~~I~~~~~i~~----~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~ 88 (187)
T 3r3r_A 13 NLFPGIGQRVMIDTSSVVIG----DVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGE 88 (187)
T ss_dssp TBCCEECTTCEECTTCEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECS
T ss_pred ccCcccCCCeEECCCCEEEC----ceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECC
Confidence 33455556666666666633 57788888887 66663 3599999999999999 46677887
Q ss_pred ccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEEEcCCcEEcCCc
Q 013483 361 DFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGF 440 (442)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~~v~~~~ 440 (442)
+ +.|+++|.|.+++||++|.||+++++.. ..+|+++++||++++| .++..|++++
T Consensus 89 ~------------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~------~~~Ig~~~~Ig~~s~V-~~~~~i~~~~ 143 (187)
T 3r3r_A 89 D------------------VTVGHKVMLHGCTIGNRVLVGMGSIVLD------GAIIEDDVMIGAGSLV-PQHKRLESGY 143 (187)
T ss_dssp S------------------CEECTTCEEESCEECSSEEECTTCEECT------TCEECSSEEECTTCEE-CTTCEECTTE
T ss_pred C------------------CEECCCCEEeCcEECCCCEECCCCEECC------CCEECCCCEECCCCEE-CCCcCcCCCc
Confidence 7 8999999999999999999999999964 5678888888888655 4555555555
Q ss_pred c
Q 013483 441 V 441 (442)
Q Consensus 441 ~ 441 (442)
+
T Consensus 144 v 144 (187)
T 3r3r_A 144 L 144 (187)
T ss_dssp E
T ss_pred E
Confidence 4
No 76
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.44 E-value=9.3e-13 Score=116.94 Aligned_cols=118 Identities=18% Similarity=0.304 Sum_probs=86.9
Q ss_pred ccCCCCcccccCccCCCceecCCceeeeEEcCCCEEe-ceEEe----eeEEcCCcEECCCCEEec-----eEEECCcccc
Q 013483 295 FYDATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE----HSVVGIRSRINANVHLKD-----TMMLGADFYE 364 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~----~~~ig~~~~i~~~~~i~~-----~~~~~~~~~~ 364 (442)
+.++...+..++.+.+++.+.+ ++.||++|.|+ .+.|. .++||++|.|++++.|.. .+++|++
T Consensus 29 ~~~~~~~ig~~~~I~~~~~i~~----~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~--- 101 (191)
T 3ixc_A 29 YAGVSPSVDSTAFIAGNARIIG----DVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKF--- 101 (191)
T ss_dssp BTTBCCEECTTSEECTTCEEEE----EEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTT---
T ss_pred ccCCCCEECCCCEECCCCEEeC----CcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCC---
Confidence 3444455555566666555532 56777777777 56663 459999999999999974 5677776
Q ss_pred chhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEEEcCCcEEcCCcc
Q 013483 365 TDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDGFV 441 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~~v~~~~~ 441 (442)
|.||++|.|.+++||++|.||+++++.+ ..+|+++++|+++++| .++..|+++++
T Consensus 102 ---------------~~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~------~~~Ig~~~~Ig~gsvV-~~~~~i~~~~~ 156 (191)
T 3ixc_A 102 ---------------VTIGHSCILHACTLGNNAFVGMGSIVMD------RAVMEEGSMLAAGSLL-TRGKIVKSGEL 156 (191)
T ss_dssp ---------------CEECTTCEECSCEECTTCEECTTCEECT------TCEECTTCEECTTCEE-CTTCEECTTEE
T ss_pred ---------------CEECCCCEEECCEECCCCEECCCCEEeC------CeEECCCCEECCCCEE-CCCcCcCCCeE
Confidence 8999999999999999999999999975 4577888888888554 56666666654
No 77
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.43 E-value=1.5e-12 Score=113.64 Aligned_cols=113 Identities=25% Similarity=0.350 Sum_probs=83.9
Q ss_pred CCCcccccCccCCCceecCCceeeeEEcCCCEEe-ceEEee----eEEcCCcEECCCCEEec----eEEECCccccchhh
Q 013483 298 ATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEH----SVVGIRSRINANVHLKD----TMMLGADFYETDAE 368 (442)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~~----~~ig~~~~i~~~~~i~~----~~~~~~~~~~~~~~ 368 (442)
+...+.+++.+.+++.+. .++.||++|.|+ .+.+.. ++||++|.|++++.|.. .+++|++
T Consensus 11 ~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~------- 79 (173)
T 1xhd_A 11 KKPKIASSAFIADYVTIT----GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDD------- 79 (173)
T ss_dssp BCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTT-------
T ss_pred CCCEECCCcEECCCCEEE----CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCC-------
Confidence 334455555555555543 267888888888 666633 89999999999999983 5677776
Q ss_pred hhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEEEcCCcEEcCC
Q 013483 369 VASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTVILKNSVITDG 439 (442)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~vi~~~~~v~~~ 439 (442)
+.|++++.|.+++||++|.||+++++.. ..+||++++|+++++| .++..|+++
T Consensus 80 -----------~~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~------~~~Ig~~~~Ig~~s~V-~~~~~i~~~ 132 (173)
T 1xhd_A 80 -----------VTVGHQVILHSCHIKKDALIGMGSIILD------GAEIGEGAFIGAGSLV-SQGKKIPPN 132 (173)
T ss_dssp -----------CEECTTCEEESCEECTTCEECTTCEECT------TCEECTTCEECTTCEE-CTTCEECTT
T ss_pred -----------CEECCCCEEeCCEECCCCEEcCCCEEcC------CCEECCCCEECCCCEE-CCCcEeCCC
Confidence 8999999999999999999999999874 5678888888888665 333344443
No 78
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.43 E-value=8.2e-13 Score=124.20 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=37.7
Q ss_pred cCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEEe-e--------------eEEcCCcEECCCCEEeceEE
Q 013483 296 YDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIE-H--------------SVVGIRSRINANVHLKDTMM 357 (442)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i~-~--------------~~ig~~~~i~~~~~i~~~~~ 357 (442)
+++.+.+.+++.+++++.| +++.|. ++.||++|+|+ .+.|. . ++||++|.|++++.|...+.
T Consensus 11 I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~ 90 (273)
T 3fs8_A 11 IKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTI 90 (273)
T ss_dssp ECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCE
T ss_pred ECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCE
Confidence 3444444445555555555 344442 46666666666 45552 2 67777777777777766556
Q ss_pred ECCc
Q 013483 358 LGAD 361 (442)
Q Consensus 358 ~~~~ 361 (442)
+|++
T Consensus 91 Ig~~ 94 (273)
T 3fs8_A 91 IGDN 94 (273)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 6654
No 79
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.43 E-value=1.1e-12 Score=117.87 Aligned_cols=88 Identities=14% Similarity=0.063 Sum_probs=55.2
Q ss_pred eeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEe----eeeEeCCCcEECCCeEEccCC---
Q 013483 337 HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKI----KECIIDKNARIGKNVIIANSE--- 409 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i----~~~~ig~~~~ig~~~~~~~~~--- 409 (442)
++.||++|.|++++.|...+.+|++ |.|+++|.| .+++||++|.|++++++.+..
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~------------------~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~ 113 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSY------------------SHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDF 113 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSS------------------EEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCC
T ss_pred eeEECCCCEECCCCEEccceEECCC------------------CEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCc
Confidence 4677777777777777766777765 677777777 236777777777777763110
Q ss_pred ----------------CcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 410 ----------------GIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 410 ----------------~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
......+||++++||++++| ||++++||+||+|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV 167 (205)
T 3vbi_A 114 SGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMV 167 (205)
T ss_dssp SSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSSCEECTTCEECTTCEE
T ss_pred ccccccCcccccccceeccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEE
Confidence 01234466666666666665 6666666666653
No 80
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.42 E-value=2.3e-12 Score=126.52 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=26.3
Q ss_pred cccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEE
Q 013483 301 PIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMML 358 (442)
Q Consensus 301 ~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~ 358 (442)
.+.+.+.+.+.+.+ +++.|. +++|++++.|+ .+.| .+++||+++.|++++.|+.++.+
T Consensus 126 ~i~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I 187 (374)
T 2iu8_A 126 GIHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVI 187 (374)
T ss_dssp SBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred ccCCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEE
Confidence 34444555555544 333332 34444444444 3344 23444444555555555433333
No 81
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.42 E-value=8.6e-13 Score=127.87 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=12.6
Q ss_pred ECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 399 IGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 399 ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
||++|.++....+.++.+|++++.|+.+++|
T Consensus 261 IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~V 291 (341)
T 3eh0_A 261 IGRYCMIGGASVINGHMEICDKVTVTGMGMV 291 (341)
T ss_dssp ECTTCEECTTCEECSSEEECSSEEECTTCEE
T ss_pred ECCCcEEcCCCEECCCCEECCCCEEeeCCEE
Confidence 3333333333333344444444444444333
No 82
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.41 E-value=1.5e-12 Score=123.02 Aligned_cols=135 Identities=13% Similarity=0.151 Sum_probs=66.0
Q ss_pred CcccccCccCCCceecCCceeeeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhh------hhh
Q 013483 300 KPIYTSRRNLPPSKIDDSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA------SLL 373 (442)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~------~~~ 373 (442)
..+++++.+.+++.+.. ++.|+++|+|+. ++.||++|.|++++.|...+.+|+++.+.+.... ..+
T Consensus 23 ~~I~p~a~I~~~a~ig~----~v~Ig~~~~I~~----~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~ 94 (283)
T 4eqy_A 23 SRIHPTAIIEPGAQLHE----TVEVGPYAIVGS----NVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKY 94 (283)
T ss_dssp CCBCTTCEECTTCEECT----TCEECTTCEECT----TEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTC
T ss_pred cccCCCCEECCCCEECC----CCEECCCCEECC----CCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccc
Confidence 34444444444444411 344444444442 5666666666666666666666665333221110 000
Q ss_pred cCCCcceEeCCCcEee-eeEeCCC-------cEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCc
Q 013483 374 AEGRVPVGIGENTKIK-ECIIDKN-------ARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGF 440 (442)
Q Consensus 374 ~~~~~~~~i~~~~~i~-~~~ig~~-------~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~ 440 (442)
......+.||++|.|+ +|.|..+ +.||+++.++....+...++||++++|+.++.+ ||++++||+++
T Consensus 95 ~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a 174 (283)
T 4eqy_A 95 KDEPTRLVIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMS 174 (283)
T ss_dssp CCCCCEEEECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred cCCCceEEECCCcccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCC
Confidence 0000114455555543 2333221 333333333333333345567777777776665 78888888887
Q ss_pred cC
Q 013483 441 VI 442 (442)
Q Consensus 441 ~i 442 (442)
+|
T Consensus 175 ~V 176 (283)
T 4eqy_A 175 GV 176 (283)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 83
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.40 E-value=2.8e-12 Score=115.91 Aligned_cols=97 Identities=23% Similarity=0.309 Sum_probs=78.0
Q ss_pred eeEEcCCCEEe-ceEEe-----eeEEcCCcEECCCCEEec--------------eEEECCccccchhhhhhhhcCCCcce
Q 013483 321 DSIISHGSFIT-SSFIE-----HSVVGIRSRINANVHLKD--------------TMMLGADFYETDAEVASLLAEGRVPV 380 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i~-----~~~ig~~~~i~~~~~i~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (442)
++.||++|.|+ .+.|. .++||++|.|++++.|.. .+.+|++ +
T Consensus 57 ~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~------------------v 118 (213)
T 3kwd_A 57 DVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDN------------------V 118 (213)
T ss_dssp SEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTT------------------C
T ss_pred ceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCC------------------c
Confidence 56777888877 66662 479999999999999975 3666766 8
Q ss_pred EeCCCcEeee-eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE----EcCCcEEcCCccC
Q 013483 381 GIGENTKIKE-CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV----ILKNSVITDGFVI 442 (442)
Q Consensus 381 ~i~~~~~i~~-~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v----i~~~~~v~~~~~i 442 (442)
.|+++|.|.. ++||++|.||+++++. + .+||++++||++++| |++++.|++|+++
T Consensus 119 ~Ig~~~~I~~~v~Ig~~v~IG~~a~I~------~-~~Ig~~~~Igags~V~~~~i~~~~~v~~~~vv 178 (213)
T 3kwd_A 119 SITHMALIHGPAYIGDGCFIGFRSTVF------N-ARVGAGCVVMMHVLIQDVEIPPGKYVPSGMVI 178 (213)
T ss_dssp EECTTCEEEEEEEECTTCEECTTCEEE------E-EEECTTCEECSSCEEESCEECTTBEECTTCEE
T ss_pred EECCCcEEcCCCEECCCCEECCCCEEe------C-cEECCCCEEcCCCEECCcEeCCCCEECCCcEE
Confidence 8888888875 9999999999999986 2 678888888888877 7888888888764
No 84
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.40 E-value=2e-12 Score=129.89 Aligned_cols=218 Identities=16% Similarity=0.193 Sum_probs=136.0
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeec---Cccceehhhhhhhhhc--------C------CcEEEEEeccChhhH
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG---GAYRLIDVPMSNCINS--------G------INKVYILTQYNSASL 69 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~---g~~pli~~~l~~l~~~--------g------i~~i~iv~~~~~~~i 69 (442)
.++.+|+||||.||||. .+.||+|+||+ |+ |+|++.++++.+. | +..+++...+..+.+
T Consensus 102 gkvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp TCEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CCeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 47999999999999995 78999999999 99 9999999999886 6 778878888888889
Q ss_pred HHHHHhhccCCCCcc----cCCceEEEecccccC-----CcCCCccccChHHHHHHhhh--hhcCCCCCccCeEEEEcCC
Q 013483 70 NRHLARAYNYGSGVT----FGDGCVEVLAATQTP-----GEAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLILSGD 138 (442)
Q Consensus 70 ~~~~~~~~~~~~~~~----~~~~~v~i~~~~~~~-----~~~~~~~~~G~~~al~~~~~--~l~~~~~~~~~~~lv~~gD 138 (442)
.+++++.-.|+-... |....+..+..+... ...-...|.|+|+.+..... .++++...+.+++.+.+.|
T Consensus 178 ~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vD 257 (486)
T 2yqc_A 178 ESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVD 257 (486)
T ss_dssp HHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETT
T ss_pred HHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCC
Confidence 999976422321111 011111111110000 00001136788888765532 1221111234688888889
Q ss_pred eeee-cCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEEcC-CC--ceEEEEeCCCccccccccccccccccccc-c
Q 013483 139 HLYR-MDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKINN-EG--RVLSFSEKPKGKDLKAMAVDTTVLGLSKQ-E 213 (442)
Q Consensus 139 ~i~~-~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d~-~~--~v~~i~ek~~~~~~~~~~~~~~~~~~~~~-~ 213 (442)
.+.. ..-..++..|..+++++++.+.+...+ ....|.+...+ +| +|+.+.|+|....... ++. .
T Consensus 258 N~l~~~~Dp~~lg~~~~~~~~~~~~vv~k~~~-~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~----------~~~~~ 326 (486)
T 2yqc_A 258 NCLVKVADPIFIGFAIAKKFDLATKVVRKRDA-NESVGLIVLDQDNQKPCVIEYSEISQELANKK----------DPQDS 326 (486)
T ss_dssp BTTCCTTCHHHHHHHHHHTCSEEEEEEECCST-TCCCCEEEEETTTTEEEEECGGGSCHHHHHCE----------ETTEE
T ss_pred CceeeccCHHHHHHHHHcCCCEEEEEEEcCCC-CCceeEEEEEecCCCEEEEEEecCCHHHhhcc----------ccccc
Confidence 8444 222367888999999999988776432 35678877532 45 4666666664321100 000 0
Q ss_pred cccccceeeeeEEEEeHHHHHHHHhh
Q 013483 214 AEEKPYIASMGVYLFKKEILLNLLRW 239 (442)
Q Consensus 214 ~~~~~~l~~~Giy~~~~~~l~~~l~~ 239 (442)
.....+..+++.|+|+.+++.+.+++
T Consensus 327 ~~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 327 SKLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EEESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred ccccccceeEEEEEEeHHHHHHHHHh
Confidence 00123577999999999999874544
No 85
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.39 E-value=2.3e-12 Score=114.52 Aligned_cols=119 Identities=20% Similarity=0.302 Sum_probs=85.9
Q ss_pred ccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhh
Q 013483 295 FYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA 370 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~ 370 (442)
.++|.+.+.+++.+++++.+ +++.+. ++.||++|.|+ .+.| .+++||++|.|++++.|.+++.++++
T Consensus 5 ~I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~--------- 75 (192)
T 3mqg_A 5 TIHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDD--------- 75 (192)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTT---------
T ss_pred EECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCC---------
Confidence 34566666666667766666 444443 57888888887 6666 45888888888888888877777776
Q ss_pred hhhcCCCcceEeCCCcEe----------------eeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---Ec
Q 013483 371 SLLAEGRVPVGIGENTKI----------------KECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---IL 431 (442)
Q Consensus 371 ~~~~~~~~~~~i~~~~~i----------------~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~ 431 (442)
+.||+++.+ ..++||++|.||.++++.. ..+||+++.|+++++| +.
T Consensus 76 ---------~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~------g~~Ig~~~~IgagsvV~~~vp 140 (192)
T 3mqg_A 76 ---------VFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVC------GATIGRYAFVGAGAVVNKDVP 140 (192)
T ss_dssp ---------CEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECT------TCEECTTCEECTTCEECSCBC
T ss_pred ---------CEECCceEEecccCCccccccccccCCcEECCCcEECCCCEECC------CCEECCCCEEcCCCEECcccC
Confidence 677776666 4588888999998888874 4578888888888777 55
Q ss_pred CCcEEc
Q 013483 432 KNSVIT 437 (442)
Q Consensus 432 ~~~~v~ 437 (442)
+++++.
T Consensus 141 ~~~v~~ 146 (192)
T 3mqg_A 141 DFALVV 146 (192)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 555544
No 86
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.39 E-value=2.3e-12 Score=119.55 Aligned_cols=104 Identities=17% Similarity=0.269 Sum_probs=81.0
Q ss_pred eeEEcCCCEEe-ceEE-----eeeEEcCCcEECCCCEEec--eEEECCccccchhhhhhhhcCCCcceEeCCCcEee---
Q 013483 321 DSIISHGSFIT-SSFI-----EHSVVGIRSRINANVHLKD--TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK--- 389 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i-----~~~~ig~~~~i~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~--- 389 (442)
+++|++++.+. .+.+ ..+.||++|.|++++.|.. .+.+|++ +.|+++|+|.
T Consensus 63 ~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g~~v~IG~~------------------~~Ig~~~~I~~~~ 124 (252)
T 3jqy_B 63 KLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGRR------------------TTIGAGFEVVTDK 124 (252)
T ss_dssp EEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESSCEEEECTT------------------CEECTTCEEECSS
T ss_pred EEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccCCEEEECCC------------------CEECCCcEEEeCC
Confidence 57888888877 4444 3467888888888888843 6777876 8899999887
Q ss_pred -eeEeCCCcEECCCeEEccCC-------------CcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 390 -ECIIDKNARIGKNVIIANSE-------------GIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 390 -~~~ig~~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
++.||++|.||++|++.+.. ...+..+||+++|||++++| ||++++||+||+|
T Consensus 125 ~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV 196 (252)
T 3jqy_B 125 CNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIV 196 (252)
T ss_dssp SEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTTCEECTTCEE
T ss_pred CCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCCCEECCCCEE
Confidence 89999999999999998763 23344688888999888776 8888888888864
No 87
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.39 E-value=3.2e-12 Score=113.44 Aligned_cols=96 Identities=20% Similarity=0.358 Sum_probs=76.2
Q ss_pred eEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEece---EEECCccccchhhhhhhhcCCCcceEeCCCcEee------e
Q 013483 322 SIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDT---MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK------E 390 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~------~ 390 (442)
..|++++.|. .+.+ .++.||++|.|++++.|..+ +.+|++ +.|+++|.|. +
T Consensus 34 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~------------------~~I~~~~~I~~~~~~g~ 95 (191)
T 3ixc_A 34 PSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEG------------------TNIQDNTVVHTDSMHGD 95 (191)
T ss_dssp CEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEECC----CC
T ss_pred CEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCC------------------CEECCCCEEeecCCcCC
Confidence 4556666666 4455 57899999999999999854 488887 8999999997 8
Q ss_pred eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 391 CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 391 ~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
++||++|.||+++++.+ .+||++++||+++.| ||++++|++|++|
T Consensus 96 ~~Ig~~~~Ig~~~~i~~-------~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV 145 (191)
T 3ixc_A 96 TVIGKFVTIGHSCILHA-------CTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLL 145 (191)
T ss_dssp EEECTTCEECTTCEECS-------CEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEEEC-------CEECCCCEECCCCEEeCCeEECCCCEECCCCEE
Confidence 99999999999998864 467777777777665 7888888888764
No 88
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.37 E-value=3.8e-12 Score=119.06 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=63.6
Q ss_pred ccCccCCCceec-CCcee-eeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhh------hhhcC
Q 013483 304 TSRRNLPPSKID-DSKIV-DSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA------SLLAE 375 (442)
Q Consensus 304 ~~~~~~~~~~i~-~~~i~-~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~ 375 (442)
..+.|.|.+.+. ++.|. ++.|+++|+|+ .++.||++|.|++++.|.+.+.+|+++.+.+.... ..+..
T Consensus 6 ~~~~I~p~a~i~~~a~Ig~~v~Ig~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g 81 (265)
T 4e6u_A 6 NHDLIHSTAIIDPSAVIASDVQIGPYCIIG----PQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKG 81 (265)
T ss_dssp --CCBCTTCEECTTCEECTTCEECTTCEEC----TTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCS
T ss_pred CCCeECCCCEECCCCEECCCCEECCCeEEC----CCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccC
Confidence 344455555552 22221 34444444444 25666666666666666666666655333221100 00000
Q ss_pred CCcceEeCCCcEee-eeEeCC-------CcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 376 GRVPVGIGENTKIK-ECIIDK-------NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 376 ~~~~~~i~~~~~i~-~~~ig~-------~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
....+.||++|.|+ +|.|.. ++.||+++.+.....+...++|+++++|+.++.+ ||++++||++++|
T Consensus 82 ~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V 161 (265)
T 4e6u_A 82 EETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGI 161 (265)
T ss_dssp CCCEEEECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CCCeEEECCCeEECCceEECcccccCCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEE
Confidence 00114555555543 233321 1333333333333333345567777777776654 7888888888764
No 89
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.37 E-value=4.9e-12 Score=110.39 Aligned_cols=96 Identities=21% Similarity=0.348 Sum_probs=77.2
Q ss_pred eEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEece---EEECCccccchhhhhhhhcCCCcceEeCCCcEee-----ee
Q 013483 322 SIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDT---MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-----EC 391 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-----~~ 391 (442)
..|++++.|. .+.+ .++.||++|.|++++.|... +.+|++ +.|+++|.|. ++
T Consensus 13 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~------------------~~I~~~~~I~~~~~~~~ 74 (173)
T 1xhd_A 13 PKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDR------------------VNVQDQCTLHQSPQYPL 74 (173)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECCTTCCE
T ss_pred CEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCC------------------CEECCCCEEEeCCCCCe
Confidence 3455555555 4444 57999999999999999875 788887 8999999997 89
Q ss_pred EeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 392 IIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 392 ~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
+||++|.|+.++.+.+ .+|++++|||.++.| ||++++|++|++|
T Consensus 75 ~Ig~~~~Ig~~~~i~~-------~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V 123 (173)
T 1xhd_A 75 ILEDDVTVGHQVILHS-------CHIKKDALIGMGSIILDGAEIGEGAFIGAGSLV 123 (173)
T ss_dssp EECTTCEECTTCEEES-------CEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEEeC-------CEECCCCEEcCCCEEcCCCEECCCCEECCCCEE
Confidence 9999999999999853 567777777777665 7889999988864
No 90
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.36 E-value=1.1e-11 Score=120.55 Aligned_cols=216 Identities=12% Similarity=0.101 Sum_probs=138.2
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceee---cCccceehhhhhhhhh-------------cCCcEEEEEeccChhhH
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPI---GGAYRLIDVPMSNCIN-------------SGINKVYILTQYNSASL 69 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi---~g~~pli~~~l~~l~~-------------~gi~~i~iv~~~~~~~i 69 (442)
..++.+|+||||.||||+ .+.||+|+|| .|+ |++++.++++.+ .++.-+++...+..+.+
T Consensus 33 ~gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t 108 (405)
T 3oc9_A 33 QGKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEI 108 (405)
T ss_dssp TTCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHH
T ss_pred cCceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHH
Confidence 357999999999999996 6899999999 899 999999988864 46776666666777899
Q ss_pred HHHHHhhccCCCC---ccc-CCceEEEeccccc----CCcCCCccccChHHHHHHhhh--hhcCCCCCccCeEEEEcCCe
Q 013483 70 NRHLARAYNYGSG---VTF-GDGCVEVLAATQT----PGEAGKRWFQGTADAVRQFHW--LFEDPRNKVIEDVLILSGDH 139 (442)
Q Consensus 70 ~~~~~~~~~~~~~---~~~-~~~~v~i~~~~~~----~~~~~~~~~~G~~~al~~~~~--~l~~~~~~~~~~~lv~~gD~ 139 (442)
.+++++...|+-. ..+ ....+..+..+.. ....-...|.|+++.+..... .++++...+.+++.+.+.|.
T Consensus 109 ~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN 188 (405)
T 3oc9_A 109 NNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDN 188 (405)
T ss_dssp HHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTB
T ss_pred HHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCC
Confidence 9999764323211 110 0011110000000 000012235688887765432 22222112246899999999
Q ss_pred -eeecCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEE-cCCCceEEEEeCCCcccccccccccccccccccccccc
Q 013483 140 -LYRMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKI-NNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEK 217 (442)
Q Consensus 140 -i~~~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~-d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (442)
+.......++.+|..+++++++.+.+...+ .+..|.++. |...+|+.+.+.|.. ...+ ..+ . ...
T Consensus 189 ~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e-~e~~-~~~--------g--~l~ 255 (405)
T 3oc9_A 189 ILCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDE-LNKQ-LSN--------G--EFI 255 (405)
T ss_dssp TTCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTT-TTCB-CTT--------S--CBS
T ss_pred cccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHH-Hhhc-CCC--------C--cee
Confidence 888888889999999999999988876652 267888775 433366666665554 1100 000 0 012
Q ss_pred cceeeeeEEEEeHHHHHHHHh
Q 013483 218 PYIASMGVYLFKKEILLNLLR 238 (442)
Q Consensus 218 ~~l~~~Giy~~~~~~l~~~l~ 238 (442)
.+..++++|+|+.++|.+.++
T Consensus 256 fn~~Ni~~h~fs~~fL~~i~~ 276 (405)
T 3oc9_A 256 YNCGHISINGYSTSFLEKAAE 276 (405)
T ss_dssp SCEEEEEEEEEEHHHHHHHTT
T ss_pred eccceeEeeecCHHHHHHhhh
Confidence 245688999999999987763
No 91
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.36 E-value=2.9e-12 Score=119.85 Aligned_cols=30 Identities=10% Similarity=0.014 Sum_probs=17.9
Q ss_pred cceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 413 EADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 413 ~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
..++||++++|+.++.+ ||++++||++++|
T Consensus 125 ~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V 159 (266)
T 3r0s_A 125 HDCLLGNNIILANNATLAGHVELGDFTVVGGLTPI 159 (266)
T ss_dssp TTCEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cccccCCCeEECCCceecCCeEECCCcEEccCCEE
Confidence 34455556666555544 6777777776653
No 92
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.36 E-value=5.7e-12 Score=111.46 Aligned_cols=96 Identities=19% Similarity=0.285 Sum_probs=77.7
Q ss_pred eEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceE---EECCccccchhhhhhhhcCCCcceEeCCCcEe--------
Q 013483 322 SIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTM---MLGADFYETDAEVASLLAEGRVPVGIGENTKI-------- 388 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i-------- 388 (442)
..+++++.|. .+.+ .++.||++|.|++++.|..+. .+|++ |.|+++|.|
T Consensus 16 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~------------------~~I~~~~~I~~~~~~~~ 77 (187)
T 3r3r_A 16 PGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGAR------------------TNIQDGSVLHVTHKSSS 77 (187)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECBCCBTT
T ss_pred cccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCC------------------CEECCCCEEecCCcccc
Confidence 4455566665 4444 589999999999999998754 88987 899999999
Q ss_pred ----eeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 389 ----KECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 389 ----~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
.+++||++|.|++++++.+ .+||++++||++++| ||++++||+|++|
T Consensus 78 ~~~~~~~~Ig~~~~Ig~~~~i~~-------~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V 133 (187)
T 3r3r_A 78 NPHGNPLIIGEDVTVGHKVMLHG-------CTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLV 133 (187)
T ss_dssp BC-CBCEEECSSCEECTTCEEES-------CEECSSEEECTTCEECTTCEECSSEEECTTCEE
T ss_pred CCCCCCeEECCCCEECCCCEEeC-------cEECCCCEECCCCEECCCCEECCCCEECCCCEE
Confidence 6899999999999999953 577777777777765 7888888888864
No 93
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.35 E-value=9.1e-12 Score=116.27 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=30.6
Q ss_pred CCCcccccCccCCCceecCCceeeeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCc
Q 013483 298 ATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
+...+++.+.+.+++.+. .++.|+++|+|+. ++.||++|.|++++.|...+.+|++
T Consensus 4 ~~~~I~p~a~I~~~a~Ig----~~v~I~~~~~I~~----~v~IG~~~~I~~~~~I~~~~~IG~~ 59 (262)
T 2qia_A 4 KSAFVHPTAIVEEGASIG----ANAHIGPFCIVGP----HVEIGEGTVLKSHVVVNGHTKIGRD 59 (262)
T ss_dssp TTCEECTTCEECTTCEEC----TTCEECTTCEECT----TEEECTTCEECSSCEECSEEEECSS
T ss_pred CCCeECCCCEECCCCEEC----CCCEECCCCEECC----CCEECCCcEECCCCEECCCcEECCC
Confidence 344444444444433331 1344555555442 5677777777777777766666666
No 94
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.33 E-value=7.4e-12 Score=112.44 Aligned_cols=110 Identities=17% Similarity=0.099 Sum_probs=78.8
Q ss_pred ccccCccCCCceecCCceeeeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEece---EEECCccccchhhhhhhhcCC
Q 013483 302 IYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDT---MMLGADFYETDAEVASLLAEG 376 (442)
Q Consensus 302 ~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~ 376 (442)
+...+.+++++.+... .++.||++|.|+ .+.| .+++||++|.|++++.|... +++|++
T Consensus 35 ig~~~~I~~~~~i~~~--~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~--------------- 97 (205)
T 3vbi_A 35 VGKNVLISKKASIYNP--GVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDF--------------- 97 (205)
T ss_dssp ECSSEEEBTTSEEESG--GGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTT---------------
T ss_pred ECCCCEECCCeEEccC--CeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCC---------------
Confidence 3444555555555210 146777777777 5666 48999999999999999543 788887
Q ss_pred CcceEeCCCcEe--------------------------eeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-
Q 013483 377 RVPVGIGENTKI--------------------------KECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV- 429 (442)
Q Consensus 377 ~~~~~i~~~~~i--------------------------~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v- 429 (442)
|.|+++|.| ++++||++|.||++++|.. ..+||+++.||++++|
T Consensus 98 ---~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~------gv~Ig~~~~Ig~gsvV~ 168 (205)
T 3vbi_A 98 ---ANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFP------NVVIGEGVAVGAMSMVK 168 (205)
T ss_dssp ---CEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECS------SCEECTTCEECTTCEEC
T ss_pred ---CEECCCcEEEeCCCCcccccccCcccccccceeccCCEEECCCCEECCCCEEcC------CCEECCCCEEcCCCEEC
Confidence 899999988 4688888888888888864 5677888888888777
Q ss_pred --EcCCcEEc
Q 013483 430 --ILKNSVIT 437 (442)
Q Consensus 430 --i~~~~~v~ 437 (442)
+.+++++.
T Consensus 169 ~~v~~~~v~~ 178 (205)
T 3vbi_A 169 ESLDDWYIYV 178 (205)
T ss_dssp SCBCTTEEEE
T ss_pred CccCCCeEEE
Confidence 55555443
No 95
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.33 E-value=5.6e-12 Score=117.44 Aligned_cols=11 Identities=9% Similarity=-0.040 Sum_probs=4.7
Q ss_pred EcCCcEEcCCc
Q 013483 430 ILKNSVITDGF 440 (442)
Q Consensus 430 i~~~~~v~~~~ 440 (442)
||++++||+++
T Consensus 142 Igd~~~Ig~~a 152 (259)
T 3hsq_A 142 LGNFAFISGLV 152 (259)
T ss_dssp ECSSCEECSSE
T ss_pred ECCCcEEeCCC
Confidence 34444444443
No 96
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.32 E-value=4.1e-12 Score=128.27 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=62.9
Q ss_pred eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcE
Q 013483 321 DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNAR 398 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ 398 (442)
++.||+++.|+ .+.| .+++||++|.|++++.|. ++.+|++ +.|+++|.|.+++||++|.
T Consensus 265 ~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~-~~~ig~~------------------~~I~~~~~i~~~~ig~~~~ 325 (456)
T 2v0h_A 265 TLEHGKDVEIDVNVIIEGNVKLGDRVKIGTGCVLK-NVVIGND------------------VEIKPYSVLEDSIVGEKAA 325 (456)
T ss_dssp EEEECSSCEECSSEEEEEEEEECTTCEECTTCEEE-EEEECTT------------------CEECSSCEEEEEEECTTCE
T ss_pred ceEECCCCEEcCCcEEcCCcEECCCCEECCCCEEE-eEEEeCC------------------CEEcCCeEEccCcCCCCcE
Confidence 46677777777 5555 578888888888888887 4455655 5555555555555555554
Q ss_pred ECCCeEEccCCCcc----------------------------cceeeCCCeEEccCcE------------EEcCCcEEcC
Q 013483 399 IGKNVIIANSEGIQ----------------------------EADRSAEGFYIRSGVT------------VILKNSVITD 438 (442)
Q Consensus 399 ig~~~~~~~~~~~~----------------------------~~~~~~~~~~i~~~~~------------vi~~~~~v~~ 438 (442)
||+++.+.....+. ...+||++++||+++. +||++++||+
T Consensus 326 I~~~~~i~~~~~ig~~~~ig~~~~i~~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~ 405 (456)
T 2v0h_A 326 IGPFSRLRPGAELAAETHVGNFVEIKKSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGS 405 (456)
T ss_dssp ECSSEEECTTCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECT
T ss_pred ECCccEECCCCEECCCCEECCCCEEeccEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECC
Confidence 44444443221111 1136777777776653 3777777777
Q ss_pred CccC
Q 013483 439 GFVI 442 (442)
Q Consensus 439 ~~~i 442 (442)
+++|
T Consensus 406 ~~~i 409 (456)
T 2v0h_A 406 DTQL 409 (456)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 7754
No 97
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.32 E-value=3.7e-12 Score=120.70 Aligned_cols=12 Identities=25% Similarity=0.368 Sum_probs=6.6
Q ss_pred EcCCcEEcCCcc
Q 013483 430 ILKNSVITDGFV 441 (442)
Q Consensus 430 i~~~~~v~~~~~ 441 (442)
|+++++|++||+
T Consensus 254 Ip~~svV~~Gs~ 265 (304)
T 3eg4_A 254 VPPYSVVVAGTM 265 (304)
T ss_dssp ECTTEEEEEEEE
T ss_pred eCCCCEEecCcE
Confidence 555565555543
No 98
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.32 E-value=1.3e-11 Score=109.81 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=69.8
Q ss_pred eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEe---ceEEECCccccchhhhhhhhcCCCcceEeCCCcEee------
Q 013483 321 DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLK---DTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK------ 389 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~------ 389 (442)
+..|+++++|. .+.| .+++||++|.|++++.|. ..+.+|++ |.|+++|+|.
T Consensus 12 ~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~------------------~~I~~~~~I~~~~~~~ 73 (194)
T 3tv0_A 12 SVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEG------------------NLIEEQALIINAYPDN 73 (194)
T ss_dssp CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTT------------------CEECTTCEEEECCCSC
T ss_pred CCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCC------------------ccccCCcccccccccc
Confidence 35566666666 4555 479999999999999995 45788887 8888888884
Q ss_pred -----------eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 390 -----------ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 390 -----------~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
+++||+++.|+.++++.+ .+|+++++||.++.| ||++++||+||+|
T Consensus 74 ~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~-------~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV 135 (194)
T 3tv0_A 74 ITPDTEDPEPKPMIIGTNNVFEVGCYSQA-------MKMGDNNVIESKAYVGRNVILTSGCIIGACCNL 135 (194)
T ss_dssp C---------CCEEECSSCEECTTCEECC-------SEECSSCEECTTCEECTTEEECSSCEECTTCEE
T ss_pred cccccccCcCCceEECCcceEecceeEee-------eeecccceecceeeECCeEEECCCCEECCCCEE
Confidence 357788888887777753 345555555555444 7899999988875
No 99
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.31 E-value=1.7e-11 Score=106.92 Aligned_cols=94 Identities=17% Similarity=0.316 Sum_probs=72.7
Q ss_pred EcCCCEEe-ceEE-eeeEEcCCcEECCCCEEece---EEECCccccchhhhhhhhcCCCcceEeCCCcEee-----eeEe
Q 013483 324 ISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDT---MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-----ECII 393 (442)
Q Consensus 324 i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-----~~~i 393 (442)
+++++.|. .+.+ .++.||++|.|++++.|... +.+|++ +.|+++|.|. +++|
T Consensus 13 i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~------------------~~I~~~~~I~~~~~~~~~I 74 (173)
T 1v3w_A 13 IHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKY------------------SNVQDNVSIHTSHGYPTEI 74 (173)
T ss_dssp ECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECBTTBCEEE
T ss_pred ECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCC------------------CEECCCcEEEecCCCCeEE
Confidence 44444444 3444 47899999999999999874 788887 8999999996 5899
Q ss_pred CCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 394 DKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 394 g~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
|++|.|++++.+.+ .+|++++|||.++.| ||++++||+|++|
T Consensus 75 g~~~~I~~~~~i~~-------~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V 121 (173)
T 1v3w_A 75 GEYVTIGHNAMVHG-------AKVGNYVIIGISSVILDGAKIGDHVIIGAGAVV 121 (173)
T ss_dssp CSSCEECTTCEEES-------CEECSSEEECTTCEECTTCEECSSEEECTTCEE
T ss_pred CCCCEECCCCEECC-------CEECCCCEECCCCEEeCCCEECCCCEECCCCEE
Confidence 99999999998843 567777777777665 7888888888764
No 100
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.31 E-value=1.9e-11 Score=114.40 Aligned_cols=118 Identities=18% Similarity=0.150 Sum_probs=55.7
Q ss_pred eeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhh------hhhcCCCcceEeCCCcEee-eeEe
Q 013483 321 DSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVA------SLLAEGRVPVGIGENTKIK-ECII 393 (442)
Q Consensus 321 ~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~i~-~~~i 393 (442)
++.|+++|+|+. +++||++|.|++++.|.+.+.+|+++.+.+.... ..+......+.||+++.|+ +|.|
T Consensus 19 ~~~Ig~~~~I~~----~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I 94 (270)
T 1j2z_A 19 GVEIGEFCVIGD----GVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMI 94 (270)
T ss_dssp TCEECTTCEECT----TCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEE
T ss_pred CCEECCCCEECC----CCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEE
Confidence 344444444442 6777777777777777777777766322221000 0000000113444444442 2222
Q ss_pred CC-------CcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 394 DK-------NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 394 g~-------~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
.. ++.||+++.+.....+...++||++++|+.++.+ ||++++||++++|
T Consensus 95 ~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V 155 (270)
T 1j2z_A 95 NPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAI 155 (270)
T ss_dssp CCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred cCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEE
Confidence 11 1222222222222222334456666666665554 7788888777754
No 101
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.30 E-value=8.7e-13 Score=125.38 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=17.9
Q ss_pred eEEcCCCEEeceEE-eeeEEcCCcEECCCCEEeceEEECCc
Q 013483 322 SIISHGSFITSSFI-EHSVVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 322 ~~i~~~~~i~~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
+.||++|+|.+..+ .++.||++|.|+.++.|++++.+|++
T Consensus 158 ~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~ 198 (316)
T 3tk8_A 158 SFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKN 198 (316)
T ss_dssp CEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTT
T ss_pred cEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCC
Confidence 44555555543222 23444444444444444444444443
No 102
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.30 E-value=2.2e-12 Score=120.60 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=46.9
Q ss_pred eeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccC-CCc-ccc
Q 013483 337 HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANS-EGI-QEA 414 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~-~~~-~~~ 414 (442)
++.||+++.|++++.|+.++.+|++ +.|..++.++ ++||++|.|++++++... .+. ...
T Consensus 196 GA~IGeGv~Igp~a~Vn~na~IGdg------------------~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~~~~~~ 256 (347)
T 3r5d_A 196 GAYIGEGTTVMHEGFVNFNAGTEGP------------------GMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSGGGNIV 256 (347)
T ss_dssp TEEECTTEEECTTCEECTTEEESSS------------------EEECSEECTT-CEECTTEEECTTCEECC------CCC
T ss_pred CCEECCCCEECCCCEECCCCEECCC------------------cEEcCCceEe-EEECCCCEECCCCEEccccCCCCccc
Confidence 3455555555555555555555544 4555555444 666666666666666532 111 112
Q ss_pred eeeCCCeEEccCcEE---EcCCcEEcCCccC
Q 013483 415 DRSAEGFYIRSGVTV---ILKNSVITDGFVI 442 (442)
Q Consensus 415 ~~~~~~~~i~~~~~v---i~~~~~v~~~~~i 442 (442)
++||+++|||+|++| ||++++||+|++|
T Consensus 257 V~IGdnv~IGAnAtIGVtIGd~~iIGAGSVV 287 (347)
T 3r5d_A 257 ISVGEGCLIGANAGIGIPLGDRNIVEAGLYI 287 (347)
T ss_dssp CEECTTCEECTTCEECSCBCTTCEECTTCEE
T ss_pred eEECCCCEECCCCEEeeEECCCCEECCCCEE
Confidence 466666666666665 6666666666653
No 103
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.30 E-value=1.8e-11 Score=110.60 Aligned_cols=93 Identities=16% Similarity=0.197 Sum_probs=72.9
Q ss_pred eEEcCCCEEeceEEeeeEEcCCcEECCCCEEec----eEEECCccccchhhhhhhhcCCCcceEeCCCcEeee-------
Q 013483 322 SIISHGSFITSSFIEHSVVGIRSRINANVHLKD----TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE------- 390 (442)
Q Consensus 322 ~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~------- 390 (442)
++|+++|.+. .++.||++|.|++++.|.. .+.+|++ +.|+++|.|..
T Consensus 46 ~~I~~~a~i~----~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~------------------~~Ig~~~~I~~~~~~~~i 103 (213)
T 3kwd_A 46 AYVHSFSNLI----GDVRIKDYVHIAPGTSIRADEGTPFHIGSR------------------TNIQDGVVIHGLQQGRVI 103 (213)
T ss_dssp CEECTTSEEE----ESEEECTTCEECTTCEEEESSSCCEEECTT------------------CEECTTCEEEECSSCCEE
T ss_pred CEECCCCEEe----CceEECCCCEEcCCcEEecCCCCceEECCC------------------CEECCCCEEEecCCCcee
Confidence 4444455444 3789999999999999965 4788887 89999999964
Q ss_pred --------eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE----EcCCcEEcCCccC
Q 013483 391 --------CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV----ILKNSVITDGFVI 442 (442)
Q Consensus 391 --------~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v----i~~~~~v~~~~~i 442 (442)
++||++|.|++++.+. ...+||++++||++++| ||++++||+|++|
T Consensus 104 g~~~~~~~~~IG~~v~Ig~~~~I~------~~v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 104 GDDGQEYSVWIGDNVSITHMALIH------GPAYIGDGCFIGFRSTVFNARVGAGCVVMMHVLI 161 (213)
T ss_dssp CTTSCEESEEECTTCEECTTCEEE------EEEEECTTCEECTTCEEEEEEECTTCEECSSCEE
T ss_pred ccCCcccceEECCCcEECCCcEEc------CCCEECCCCEECCCCEEeCcEECCCCEEcCCCEE
Confidence 6777777777777775 45788889999998876 8999999999875
No 104
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.29 E-value=1e-11 Score=121.39 Aligned_cols=61 Identities=23% Similarity=0.254 Sum_probs=33.1
Q ss_pred cccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCc
Q 013483 301 PIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 301 ~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
.+.+.+.+.+.+.+ +++.|. +++|+++++|+ ++.| .+++||+++.||++|.|+.++.++.+
T Consensus 121 ~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~~I~~~~~I~~~ 185 (372)
T 3pmo_A 121 GIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHD 185 (372)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcccCCCcEEEee
Confidence 44555555555555 344443 35555555555 4444 45556666666666666655555544
No 105
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.28 E-value=1.5e-11 Score=113.26 Aligned_cols=104 Identities=19% Similarity=0.304 Sum_probs=59.8
Q ss_pred cCCCCcccccCccCCCcee-cCCce-eeeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhh
Q 013483 296 YDATKPIYTSRRNLPPSKI-DDSKI-VDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLL 373 (442)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~i-~~~~i-~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~ 373 (442)
+++.+.+.+.+.++.++.+ .++.| .++.||++|.|+. +++|+.++.||++|.|+.++.+.+.. .
T Consensus 94 I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~----~~~I~~~~~IG~~~~I~~~~~i~~~~----------~ 159 (240)
T 3r8y_A 94 IEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDM----NAVLGGRATVGKNCHVGAGAVLAGVI----------E 159 (240)
T ss_dssp ECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEECT----TCEECTTCEECTTCEECTTCEECCCC----------S
T ss_pred ECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECC----CCEECCCCEECCCcEECCCcEECCCc----------c
Confidence 3344444455555555555 34444 2455555555541 45555555555555555555554320 0
Q ss_pred cCCCcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCccc
Q 013483 374 AEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQE 413 (442)
Q Consensus 374 ~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~ 413 (442)
.....|+.||++|.|+ +|+|.++++||++++++....+.+
T Consensus 160 ~~~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~ 200 (240)
T 3r8y_A 160 PPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTE 200 (240)
T ss_dssp CTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCCCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEECC
Confidence 1112238899999997 788888888888888887554443
No 106
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.28 E-value=2.6e-11 Score=115.62 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=30.1
Q ss_pred CCCcccccCccCCCceecCCceeeeEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCc
Q 013483 298 ATKPIYTSRRNLPPSKIDDSKIVDSIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 298 ~~~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
+.+.+++++.+.+.+.+.. ++.|+++|+|+. ++.||++|.|++++.|...+.+|++
T Consensus 6 ~~~~I~p~A~I~~~a~Ig~----~v~Ig~~~~I~~----~v~IG~~~~I~~~~~I~g~~~IG~~ 61 (305)
T 3t57_A 6 SEVLIHPSAVVHPNAVIGK----GVSVGPYCTIGS----SVKLGNGCKLYPSSHVFGNTELGES 61 (305)
T ss_dssp ---CBCTTSEECTTSEECT----TCEECTTCEECT----TEEECTTCEECTTCEECSSEEECTT
T ss_pred CCCeECCCCEECCCCEECC----CCEECCCCEECC----CCEECCCCEECCCcEECCCcEECCC
Confidence 4444555555555444421 344444444442 6677777777777777766666666
No 107
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.27 E-value=6.7e-12 Score=126.83 Aligned_cols=119 Identities=18% Similarity=0.248 Sum_probs=76.8
Q ss_pred cCccCCCcee-cCCce-eeeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceE
Q 013483 305 SRRNLPPSKI-DDSKI-VDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVG 381 (442)
Q Consensus 305 ~~~~~~~~~i-~~~~i-~~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (442)
.+.+++.+.+ +++.| .++.||++|.|+ ++.|.+++||++|.|++++.|+++ .+|++ +.
T Consensus 268 ~~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~-~Ig~~------------------~~ 328 (459)
T 4fce_A 268 ELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDA-RLDAN------------------CT 328 (459)
T ss_dssp EEEECSSCEECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESC-EECTT------------------CE
T ss_pred cEEECCCcEECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCC-EECCC------------------CE
Confidence 4456666666 45555 357777777777 666666777777777777777553 34544 66
Q ss_pred eCCCcEee-eeEeCCCcEECCCeEEccC-----CCcc-----cceeeCCCeEEccCc------------EEEcCCcEEcC
Q 013483 382 IGENTKIK-ECIIDKNARIGKNVIIANS-----EGIQ-----EADRSAEGFYIRSGV------------TVILKNSVITD 438 (442)
Q Consensus 382 i~~~~~i~-~~~ig~~~~ig~~~~~~~~-----~~~~-----~~~~~~~~~~i~~~~------------~vi~~~~~v~~ 438 (442)
||++|.|. +++||++|.||+++.+.+. ..+. +..+||++++||.++ ++||++++||+
T Consensus 329 ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~ 408 (459)
T 4fce_A 329 VGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGS 408 (459)
T ss_dssp ECSSEEECTTCEECTTCEEEEEEEEEEEEECTTCEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECT
T ss_pred ECCccEECCCcEECCCcEECCCeEEeeeEEcCCCEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcC
Confidence 66666665 6666666666666554321 1111 123788888888776 45899999998
Q ss_pred CccC
Q 013483 439 GFVI 442 (442)
Q Consensus 439 ~~~i 442 (442)
|++|
T Consensus 409 ~~~I 412 (459)
T 4fce_A 409 DTQL 412 (459)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 8875
No 108
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.27 E-value=1.6e-11 Score=124.29 Aligned_cols=121 Identities=18% Similarity=0.271 Sum_probs=85.6
Q ss_pred ccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCc
Q 013483 302 IYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRV 378 (442)
Q Consensus 302 ~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (442)
+.+++.+++.+.+ +++.|. ++.||++|+|+ .+.|.+++||++|.|+ ++.|.++. +|++
T Consensus 271 i~~~~~i~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~-Ig~~----------------- 331 (468)
T 1hm9_A 271 IDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESS-VADG----------------- 331 (468)
T ss_dssp ECTTCEECTTCEECSSCEEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCE-ECTT-----------------
T ss_pred ECCCcEECCCCEECCCcEECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccc-cCCC-----------------
Confidence 3344556666666 455554 68888888888 7777888899999998 88888754 4554
Q ss_pred ceEeCCCcEee-eeEeCCCcEECCCeEEccC-----CCcc-----cceeeCCCeEEccCc------------EEEcCCcE
Q 013483 379 PVGIGENTKIK-ECIIDKNARIGKNVIIANS-----EGIQ-----EADRSAEGFYIRSGV------------TVILKNSV 435 (442)
Q Consensus 379 ~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~-----~~~~-----~~~~~~~~~~i~~~~------------~vi~~~~~ 435 (442)
+.||++|.|. +++||++|.||+++.+.+. ..+. ...+||++++||.++ ++||++++
T Consensus 332 -~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~ 410 (468)
T 1hm9_A 332 -VTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVF 410 (468)
T ss_dssp -CEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCE
T ss_pred -cEECCceEEecCcEECCccEECCCcEEeeeEEcCCcEeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeE
Confidence 7888888887 7888888888876666431 1111 123678888888764 45888888
Q ss_pred EcCCccC
Q 013483 436 ITDGFVI 442 (442)
Q Consensus 436 v~~~~~i 442 (442)
||+|++|
T Consensus 411 Ig~~~~i 417 (468)
T 1hm9_A 411 VGSNSTI 417 (468)
T ss_dssp ECTTCEE
T ss_pred ECCCCEE
Confidence 8888764
No 109
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.26 E-value=3.2e-11 Score=106.78 Aligned_cols=95 Identities=14% Similarity=0.270 Sum_probs=75.5
Q ss_pred EEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEec---eEEECCccccchhhhhhhhcCCCcceEeCCCcEeeee------
Q 013483 323 IISHGSFIT-SSFI-EHSVVGIRSRINANVHLKD---TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKEC------ 391 (442)
Q Consensus 323 ~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~------ 391 (442)
.|++++.|. .+.+ .++.||++|.|++++.|.. .+.+|++ |.|+++|.|..+
T Consensus 21 ~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~------------------~~I~~~~~I~~~~~~~~~ 82 (189)
T 3r1w_A 21 KLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGAR------------------TSVQDGSVLHITHASDYN 82 (189)
T ss_dssp EECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTT------------------CEECTTCEEECBCCSSSS
T ss_pred EECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCC------------------CEECCCCEEecCCcccCC
Confidence 455555555 4444 4899999999999999984 4588987 899999999654
Q ss_pred ------EeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 392 ------IIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 392 ------~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
+||++|.|++++.+.+ .+||++++||++++| ||++++||+|++|
T Consensus 83 ~~~~~~~Ig~~~~Ig~~~~i~~-------~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V 137 (189)
T 3r1w_A 83 PGGYPLIIGDDVTIGHQAMLHG-------CTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATV 137 (189)
T ss_dssp TTCBCEEECSSEEECTTCEEES-------CEECSSEEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CCCCCeEECCCCEECCCCEEeC-------cEECCCcEECCCCEEcCCCEECCCCEEccCCEE
Confidence 9999999999999863 577777777777766 7889999988864
No 110
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.25 E-value=1.5e-11 Score=115.16 Aligned_cols=25 Identities=8% Similarity=0.158 Sum_probs=10.4
Q ss_pred eeEEcCCcEECCCCEEeceEEECCc
Q 013483 337 HSVVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
++.||++|.|++++.|++++.+|++
T Consensus 133 ~~~IG~~~~I~~~~~Ig~~~~IG~~ 157 (276)
T 3gos_A 133 GAFVDEGTMVDTWATVGSCAQIGKN 157 (276)
T ss_dssp TCEECTTCEECTTEEECTTCEECTT
T ss_pred CeEECCCCEECCCCEECCCCEECCC
Confidence 3444444444444444443334433
No 111
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.25 E-value=7.7e-12 Score=116.11 Aligned_cols=51 Identities=10% Similarity=0.232 Sum_probs=25.2
Q ss_pred eEeCCCcEECCCeEEccC-CC-cccceeeCCCeEEccCcEE---EcCCcEEcCCcc
Q 013483 391 CIIDKNARIGKNVIIANS-EG-IQEADRSAEGFYIRSGVTV---ILKNSVITDGFV 441 (442)
Q Consensus 391 ~~ig~~~~ig~~~~~~~~-~~-~~~~~~~~~~~~i~~~~~v---i~~~~~v~~~~~ 441 (442)
+.||++|.|++++++... .. .....+||+++|||++++| ||++++||+||+
T Consensus 208 v~IGd~v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtIgVtIGd~~iIGAGSV 263 (332)
T 3fsy_A 208 VVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLY 263 (332)
T ss_dssp CEECTTCEECTTCEECSBCC---CCBCEECTTCEECTTCEECSCBCSSCEECTTCE
T ss_pred eEECCCCEECCCCEEcCCCCCCCccceEECCCCEECCCCEEeeEECCCCEECCCCE
Confidence 555555555555555431 11 1112355555555555554 555555555554
No 112
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.23 E-value=1e-10 Score=104.00 Aligned_cols=80 Identities=18% Similarity=0.207 Sum_probs=49.7
Q ss_pred CCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCC
Q 013483 326 HGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKN 402 (442)
Q Consensus 326 ~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~ 402 (442)
++|+|. .+.| .++.||++|.|++++.|++.+.+|++ +.|+++|.|. +++||++|.||++
T Consensus 94 ~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~------------------~~I~~~~~i~~~~~Ig~~~~Ig~~ 155 (194)
T 3bfp_A 94 AGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEF------------------SHVSVGAKCAGNVKIGKNCFLGIN 155 (194)
T ss_dssp SCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT------------------CEECTTCEECTTCEECTTCEECTT
T ss_pred CCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCC------------------CEECCCCEECCCcEECCCCEEcCC
Confidence 444444 2223 25666666777666666655555655 6666666665 3666666666666
Q ss_pred eEEccCCCcccceeeCCCeEEccCcEE
Q 013483 403 VIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
+++. ...+|+++++||+|++|
T Consensus 156 ~~i~------~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 156 SCVL------PNLSLADDSILGGGATL 176 (194)
T ss_dssp CEEC------TTCEECTTCEECTTCEE
T ss_pred CEEC------CCCEECCCCEECCCCEE
Confidence 6665 34567777777777666
No 113
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.22 E-value=6.1e-11 Score=113.55 Aligned_cols=137 Identities=12% Similarity=0.076 Sum_probs=71.8
Q ss_pred CcccccCccCCCceecCCceeeeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhh--------hh
Q 013483 300 KPIYTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAE--------VA 370 (442)
Q Consensus 300 ~~~~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~--------~~ 370 (442)
+.+.+++.+++++.+.+ ++.|+++|+|+ .+.|.+|+||+++.|+++++|+++++.++..+..... ..
T Consensus 66 a~I~~~a~I~~~~~I~g----~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~ 141 (334)
T 2pig_A 66 AMAFAGTEITGNARITQ----PCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAI 141 (334)
T ss_dssp CEEETTCEECTTCEEES----SCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC-
T ss_pred eEEcCCcEECCCcEEee----eeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeec
Confidence 33344444444444422 34555555555 4455566666666666666666554332210000000 00
Q ss_pred hhhcCC-CcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCc---EEEcCCcEEcCCcc
Q 013483 371 SLLAEG-RVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGV---TVILKNSVITDGFV 441 (442)
Q Consensus 371 ~~~~~~-~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~---~vi~~~~~v~~~~~ 441 (442)
+.++.. ...+.|++++.|.+|+|+++|.|+.++++. ...+.....|++++.+..++ +.|++++.|++++.
T Consensus 142 ~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~svI~~~a~I~~~a~V~~~~~~~v~I~~~~~I~g~a~ 215 (334)
T 2pig_A 142 QGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATIT-HAFIEHRAEVFDFALIEGDKDNNVWICDCAKVYGHAR 215 (334)
T ss_dssp -------CCCEEECTTCEEESCEEETTCEECTTCEEE-SEEECTTCEECTTCEEECCSSCCEEECTTCEECTTCE
T ss_pred ceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEe-CcEEcCCCEECCCcEECCceeccEEECCCcEEeeeEE
Confidence 111111 111778888888888888888888888886 34444444555555554432 33677777777654
No 114
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.22 E-value=8.3e-11 Score=106.33 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=67.3
Q ss_pred eeEEcCCCEEe-c-eEEe----eeEEcCCcEECCCCEEec---eEEECCccccchhhhhhhhcCCCcceEeCCCcEe---
Q 013483 321 DSIISHGSFIT-S-SFIE----HSVVGIRSRINANVHLKD---TMMLGADFYETDAEVASLLAEGRVPVGIGENTKI--- 388 (442)
Q Consensus 321 ~~~i~~~~~i~-~-~~i~----~~~ig~~~~i~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i--- 388 (442)
+..|+++|.|. . ..+. ++.||++|.|++++.|.. .+.+|++ +.|++.+.+
T Consensus 36 ~v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~------------------~~Ig~~~ii~~~ 97 (215)
T 2wlg_A 36 SVYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAK------------------TTMGNGEITIAE 97 (215)
T ss_dssp EEEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTT------------------CEECSEEEEECT
T ss_pred EEEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCC------------------CEECCEEEEEeC
Confidence 45666666666 3 2332 367777777777777753 3666665 677764444
Q ss_pred -eeeEeCCCcEECCCeEEccCC-------------CcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 389 -KECIIDKNARIGKNVIIANSE-------------GIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 389 -~~~~ig~~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
.+++||++|.|++++++.+.. ......+||+++|||++++| ||++++|++||+|
T Consensus 98 ~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV 170 (215)
T 2wlg_A 98 KGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVL 170 (215)
T ss_dssp TCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCEE
Confidence 567788888888888877542 11223578888888888766 7777777777753
No 115
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.20 E-value=3.6e-11 Score=114.21 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=17.9
Q ss_pred eEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECC
Q 013483 322 SIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGA 360 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~ 360 (442)
+.|+.++.|+ ++.|...+|+.++.||+++.|...+.+|+
T Consensus 152 a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~ 191 (316)
T 3tk8_A 152 AIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGS 191 (316)
T ss_dssp CEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECT
T ss_pred eEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECC
Confidence 3444444444 33443334444445555555544444444
No 116
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.20 E-value=6.6e-11 Score=110.86 Aligned_cols=23 Identities=13% Similarity=0.173 Sum_probs=13.5
Q ss_pred EEcCCcEECCCCEEeceEEECCc
Q 013483 339 VVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 339 ~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
+|+.++.||+++.|...+.++++
T Consensus 129 ~i~~~~~IG~~~~I~~~~~Ig~~ 151 (276)
T 3gos_A 129 YVNIGAFVDEGTMVDTWATVGSC 151 (276)
T ss_dssp EECTTCEECTTCEECTTEEECTT
T ss_pred EEcCCeEECCCCEECCCCEECCC
Confidence 55566666666666655555554
No 117
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.20 E-value=5.4e-11 Score=107.99 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=42.5
Q ss_pred eeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCcccce
Q 013483 337 HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQEAD 415 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~~~ 415 (442)
++.||++|.|++++.|++.+.+|++ +.|++++.|. +++||++|.||+++++.. ..
T Consensus 129 ~~~IG~~~~I~~~~~I~~~~~Ig~~------------------~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~------~~ 184 (220)
T 4ea9_A 129 DSWIGDLAIINTGAVVDHDCRLGAA------------------CHLGPASALAGGVSVGERAFLGVGARVIP------GV 184 (220)
T ss_dssp TCEECTTCEECTTCEECTTCEECTT------------------CEECTTCEECSSCEECTTCEECTTCEECT------TC
T ss_pred CCEECCCCEECCCCEECCCCEECCC------------------CEECCCCEEcCCCEECCCCEECCCCEEcC------Cc
Confidence 4566666666666666655555554 5666666665 366666666666666653 44
Q ss_pred eeCCCeEEccCcEE
Q 013483 416 RSAEGFYIRSGVTV 429 (442)
Q Consensus 416 ~~~~~~~i~~~~~v 429 (442)
+||+++.||+|++|
T Consensus 185 ~Ig~~~~igagsvv 198 (220)
T 4ea9_A 185 TIGADTIVGAGGVV 198 (220)
T ss_dssp EECTTCEECTTCEE
T ss_pred EECCCCEECCCCEE
Confidence 56666666666665
No 118
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.20 E-value=1.5e-10 Score=105.01 Aligned_cols=118 Identities=14% Similarity=0.174 Sum_probs=63.3
Q ss_pred eecCChHHHHHHhhhhhcCC-CCccccCCCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEcCCcE
Q 013483 271 EDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVGIRSR 345 (442)
Q Consensus 271 ~di~t~~~~~~an~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig~~~~ 345 (442)
.-+++++...+..+.+.... ....+.++.+.+...+.++.++.+ .++.|. ++.||++|.|+ .+.| .+++||++|.
T Consensus 76 iAIg~~~~R~~i~~~l~~~g~~~~~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ 155 (220)
T 4ea9_A 76 VAIGDNRLRQKLGRKARDHGFSLVNAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACH 155 (220)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCEECCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EecCCHHHHHHHHHHHHhcCCCcCCcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCE
Confidence 34556555555555544332 123445555555555555655555 344442 45666666666 4444 3456666666
Q ss_pred ECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEEc
Q 013483 346 INANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIA 406 (442)
Q Consensus 346 i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~ 406 (442)
|++++.|.+.+.+|++ +.||.++.|. ++.||++|.||+++++.
T Consensus 156 i~~~~~i~~~v~Ig~~------------------~~Ig~~~~i~~~~~Ig~~~~igagsvv~ 199 (220)
T 4ea9_A 156 LGPASALAGGVSVGER------------------AFLGVGARVIPGVTIGADTIVGAGGVVV 199 (220)
T ss_dssp ECTTCEECSSCEECTT------------------CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred ECCCCEEcCCCEECCC------------------CEECCCCEEcCCcEECCCCEECCCCEEc
Confidence 6666665555555554 5555555554 45555555555555554
No 119
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.20 E-value=4.4e-11 Score=113.29 Aligned_cols=110 Identities=19% Similarity=0.274 Sum_probs=72.0
Q ss_pred cCccCCCceecCCceeeeEEcCCCEEeceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeC
Q 013483 305 SRRNLPPSKIDDSKIVDSIISHGSFITSSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIG 383 (442)
Q Consensus 305 ~~~~~~~~~i~~~~i~~~~i~~~~~i~~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 383 (442)
++.+.+++.+.. ++.|+++|+|.+..| .++.||++|.|.+++.|++++.+|++ |.|+
T Consensus 129 g~~I~p~a~I~~----~v~Ig~g~~I~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~------------------v~I~ 186 (304)
T 3eg4_A 129 GFRAVPNCIVRH----SAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGKN------------------VHLS 186 (304)
T ss_dssp CCEECTTCEEBT----TCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTT------------------CEEC
T ss_pred CcEEcCCEEECC----CcEECCCCEEeCCEECCCCEECCCcEEcCCcEECCCCccCCC------------------cEEC
Confidence 344455444422 466777777774444 45677777777777777776666665 7777
Q ss_pred CCcEeee---------eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-----EcCCc-------EEcCCccC
Q 013483 384 ENTKIKE---------CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-----ILKNS-------VITDGFVI 442 (442)
Q Consensus 384 ~~~~i~~---------~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-----i~~~~-------~v~~~~~i 442 (442)
+++.|.+ ++||++|.||++++|.. .++||++++||+|++| |++++ .|+++++|
T Consensus 187 ~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~------gv~IG~~avIgagsvV~~g~~Igd~~~g~~~~~~Ip~~svV 260 (304)
T 3eg4_A 187 GGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVE------GCIVREGSVLGMGVFIGKSTKIVDRATGEVFYGEVPPYSVV 260 (304)
T ss_dssp TTCEECCCCSSTTCCCCEECTTCEECTTCEECT------TCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred CCCEECCccccCccCCeEEcCCCEECCCCEEcC------CcEECCCcEECCCCEEcCCeEECccceeeeccCEeCCCCEE
Confidence 7777765 88888888888887764 4567777777777555 34443 47776653
No 120
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.20 E-value=8.3e-11 Score=112.60 Aligned_cols=130 Identities=17% Similarity=0.085 Sum_probs=82.1
Q ss_pred ccCCCCcccccCccCCCcee-cCCceeeeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCc----------c
Q 013483 295 FYDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGAD----------F 362 (442)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~i-~~~~i~~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~----------~ 362 (442)
.+++...+.+.+.|++.+.| +++.|.++.|++++.|+ .+.|.+++|+++|.|+.++++.+.+.+..+ .
T Consensus 73 ~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~ 152 (334)
T 2pig_A 73 EITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQIL 152 (334)
T ss_dssp EECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCE
T ss_pred EECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCe
Confidence 34455666666666667776 56777788888888888 777777777777777777766554443211 0
Q ss_pred ccchh--hhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 363 YETDA--EVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 363 ~~~~~--~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
++.+. ...++..++ |.|+.+|+|++|+|++++.|++++++.... + ....+.+++.|+.++.+
T Consensus 153 ~I~~~a~I~~s~I~~g---~~I~~~a~I~~svI~~~a~I~~~a~V~~~~-~-~~v~I~~~~~I~g~a~V 216 (334)
T 2pig_A 153 QIYDRATVNHSRIVHQ---VQLYGNATITHAFIEHRAEVFDFALIEGDK-D-NNVWICDCAKVYGHARV 216 (334)
T ss_dssp EECTTCEEESCEEETT---CEECTTCEEESEEECTTCEECTTCEEECCS-S-CCEEECTTCEECTTCEE
T ss_pred EECCCCEEeccEEcCC---CEEcCCeEEeCcEEcCCCEECCCcEECCce-e-ccEEECCCcEEeeeEEE
Confidence 11110 011222333 788889999999999999999999997644 1 33345555555444443
No 121
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.16 E-value=1.5e-10 Score=114.75 Aligned_cols=107 Identities=24% Similarity=0.192 Sum_probs=78.0
Q ss_pred CCCcccccCccCCCcee-cCCcee-eeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhc
Q 013483 298 ATKPIYTSRRNLPPSKI-DDSKIV-DSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLA 374 (442)
Q Consensus 298 ~~~~~~~~~~~~~~~~i-~~~~i~-~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 374 (442)
+...+.+.+.++.++.+ .++.|. ++.||++|.|+ ++.|.+++||+++.|++++.|+++++ |++
T Consensus 255 ~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~I-g~~------------- 320 (401)
T 2ggo_A 255 SGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVI-AED------------- 320 (401)
T ss_dssp TTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEE-CTT-------------
T ss_pred CCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEE-CCC-------------
Confidence 34444455566666666 556664 68899999999 68888899999999999998877544 555
Q ss_pred CCCcceEeCCCcEee-------------------------eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 375 EGRVPVGIGENTKIK-------------------------ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 375 ~~~~~~~i~~~~~i~-------------------------~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
+.||++|.|. +++||++|.||+++++. ...+||+++.|++|++|
T Consensus 321 -----~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~------~gv~Ig~~~vi~~gsvv 389 (401)
T 2ggo_A 321 -----VNFGAGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTIL------PGVKIGAYARIYPGAVV 389 (401)
T ss_dssp -----CEECTTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEEC------TTCEECTTCEECTTCEE
T ss_pred -----cEECCCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEc------CCcEECCCcEECCCCeE
Confidence 7788888775 45666666666666665 56788888888888777
No 122
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.16 E-value=1.2e-10 Score=107.63 Aligned_cols=96 Identities=10% Similarity=0.250 Sum_probs=73.9
Q ss_pred EEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEece----EEECCccccchhhhhhhhcCCCcceEeCCCcEee-------
Q 013483 323 IISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDT----MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK------- 389 (442)
Q Consensus 323 ~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~------- 389 (442)
.|++++.|. .+.+ .++.||++|.|++++.|..+ +.+|++ +.|+++|.|.
T Consensus 61 ~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~------------------~~Ig~~~~I~~~~~~~~ 122 (247)
T 1qre_A 61 VIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDR------------------SNVQDGVVLHALETINE 122 (247)
T ss_dssp EECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTT------------------CEECTTCEEEECCSBCT
T ss_pred EECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCC------------------CEECCCeEEEecccccc
Confidence 344455554 3444 47899999999999999774 478887 8999999986
Q ss_pred -----------------eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE----EcCCcEEcCCccC
Q 013483 390 -----------------ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV----ILKNSVITDGFVI 442 (442)
Q Consensus 390 -----------------~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v----i~~~~~v~~~~~i 442 (442)
+++||++|.||+++++.+ ..+||++++||.+++| ||++++||+|++|
T Consensus 123 ~g~~~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~------~~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 123 EGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHG------PAAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp TSCBCGGGCEEETTEEESEEECTTCEECTTCEEEE------EEEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred cCcccccceeeccCccCceEECCCCEECCCCEEcC------CcEECCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 388899999999988864 3577888888877764 8999999998875
No 123
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.14 E-value=2.7e-10 Score=105.54 Aligned_cols=92 Identities=22% Similarity=0.289 Sum_probs=71.3
Q ss_pred eeEEcCCCEEe-ceEE---eeeEEcCCcEECCCCEEec---eEEECCccccchhhhhhhhcCCCcceEeCCCcEeee---
Q 013483 321 DSIISHGSFIT-SSFI---EHSVVGIRSRINANVHLKD---TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE--- 390 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i---~~~~ig~~~~i~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~--- 390 (442)
++.||++|.|. .+.+ .+++||++|.|++++.|.. .+.+|++ |.||++|.|.+
T Consensus 85 ~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~------------------~~Ig~~~~I~~~~~ 146 (252)
T 3jqy_B 85 YVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHD------------------CMIARDVILRASDG 146 (252)
T ss_dssp EEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTT------------------CEECSSEEEECSCS
T ss_pred eEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCC------------------CEEcCCcEEecCCC
Confidence 57788888888 5566 3689999999999999986 7778887 88888888875
Q ss_pred -----------------eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 391 -----------------CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 391 -----------------~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
++||++|.||+++++.. ..+||+++.||+|++| +.+++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~------gv~IG~~~~IgagsvV~~~vp~~~~~ 206 (252)
T 3jqy_B 147 HPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMK------GVSVGSGSVIGYGSIVTKDVPSMCAA 206 (252)
T ss_dssp SCEEETTTCBBCCCCCCEEECSSCEECSSEEECT------TCEECTTCEECTTCEECSCBCTTEEE
T ss_pred cccccccccccccccCCeEEecCcEECCCCEECC------CCEECCCCEECCCCEECcccCCCCEE
Confidence 48888888888888864 5677888888888776 4455443
No 124
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.14 E-value=2.7e-10 Score=101.16 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=61.6
Q ss_pred eeeecCChHHHHHHhhhhhcCC-CCccccCCCCcccccCccC--CCcee-cCCcee-eeEEcCCCEEe-ceEE-eeeEEc
Q 013483 269 YWEDIGTIRSFFEANLALTAHP-PMFSFYDATKPIYTSRRNL--PPSKI-DDSKIV-DSIISHGSFIT-SSFI-EHSVVG 341 (442)
Q Consensus 269 ~~~di~t~~~~~~an~~~l~~~-~~~~~~~~~~~~~~~~~~~--~~~~i-~~~~i~-~~~i~~~~~i~-~~~i-~~~~ig 341 (442)
...-++++....+..+.+.+.. .....+++.+.+.+++.++ +++.+ +++.|. ++.||++|.|+ .+.+ .++.||
T Consensus 50 ~~iaig~~~~r~~~~~~l~~~~~~~~~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig 129 (194)
T 3bfp_A 50 FFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIG 129 (194)
T ss_dssp EEECCCCHHHHHHHHHHHHTTTCCBCCEECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCccccccCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEEC
Confidence 3456777766666655554322 1223445555555555555 55555 344442 35555555555 4444 245555
Q ss_pred CCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEE
Q 013483 342 IRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVII 405 (442)
Q Consensus 342 ~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~ 405 (442)
++|.|++++.|...+.+|++ +.||.++.|. ++.||++|.||+++++
T Consensus 130 ~~~~I~~~~~i~~~~~Ig~~------------------~~Ig~~~~i~~~~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 130 EFSHVSVGAKCAGNVKIGKN------------------CFLGINSCVLPNLSLADDSILGGGATL 176 (194)
T ss_dssp TTCEECTTCEECTTCEECTT------------------CEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCCEECCCCEECCCcEECCC------------------CEEcCCCEECCCCEECCCCEECCCCEE
Confidence 55555555555554445544 5555555553 4555555555555555
No 125
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.08 E-value=1.4e-10 Score=103.14 Aligned_cols=25 Identities=28% Similarity=0.400 Sum_probs=16.9
Q ss_pred eeEEcCCcEECCCCEEec--eEEECCc
Q 013483 337 HSVVGIRSRINANVHLKD--TMMLGAD 361 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~--~~~~~~~ 361 (442)
++.||+++.|++++.|.+ .+.+|++
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~ 102 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDH 102 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTT
T ss_pred CeEECCCcEECcCCEEecCceEEECCC
Confidence 567777777777777743 3566665
No 126
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.08 E-value=4.2e-10 Score=105.34 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=49.5
Q ss_pred eeEEcCCCEEe-ceEE-eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeee--------
Q 013483 321 DSIISHGSFIT-SSFI-EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE-------- 390 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i-~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~-------- 390 (442)
++.||+++.|+ .+.| .++.||++|.|..++.++ +.+|++ |.|+++|.|..
T Consensus 196 GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig--v~IGdn------------------v~IgpGa~IgG~~~~~~~~ 255 (347)
T 3r5d_A 196 GAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG--VFVGKG------------------SDLGGGCSTMGTLSGGGNI 255 (347)
T ss_dssp TEEECTTEEECTTCEECTTEEESSSEEECSEECTT--CEECTT------------------EEECTTCEECC------CC
T ss_pred CCEECCCCEECCCCEECCCCEECCCcEEcCCceEe--EEECCC------------------CEECCCCEEccccCCCCcc
Confidence 35566666666 3333 245556666555554443 556665 77777777753
Q ss_pred -eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 391 -CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 391 -~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
++||++|.||+|++| . .+||+++.||+|++|
T Consensus 256 ~V~IGdnv~IGAnAtI--G------VtIGd~~iIGAGSVV 287 (347)
T 3r5d_A 256 VISVGEGCLIGANAGI--G------IPLGDRNIVEAGLYI 287 (347)
T ss_dssp CCEECTTCEECTTCEE--C------SCBCTTCEECTTCEE
T ss_pred ceEECCCCEECCCCEE--e------eEECCCCEECCCCEE
Confidence 788888888888888 2 345555555555333
No 127
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.07 E-value=3e-10 Score=114.00 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=65.4
Q ss_pred cccCCCCcccccCccCCCcee-cCCceeeeEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhh
Q 013483 294 SFYDATKPIYTSRRNLPPSKI-DDSKIVDSIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVAS 371 (442)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~i-~~~~i~~~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~ 371 (442)
..+++.+.+.+.+.|++++.| +++.|.++.||++|.|+ .+.|.+++||++|.|++++.|.+ +++|++
T Consensus 280 a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~g-v~IGd~---------- 348 (496)
T 3c8v_A 280 ASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIIN-AHLGDM---------- 348 (496)
T ss_dssp CEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEES-EEEEET----------
T ss_pred cEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcC-ceECCC----------
Confidence 344555555556666777776 56666677788888887 67777788888888888887776 344544
Q ss_pred hhcCCCcceEeCCCcEee-e----eEeCCCcEECCCeEEc
Q 013483 372 LLAEGRVPVGIGENTKIK-E----CIIDKNARIGKNVIIA 406 (442)
Q Consensus 372 ~~~~~~~~~~i~~~~~i~-~----~~ig~~~~ig~~~~~~ 406 (442)
|.||++|.|. + ++||++|.||+++++.
T Consensus 349 --------v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 349 --------IFTGFNSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp --------CEECTTCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred --------cEECCCCEEeCCCCcceEECCCCEECCCCEEe
Confidence 7777777776 4 4777777777777774
No 128
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.05 E-value=2.4e-10 Score=108.00 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=55.4
Q ss_pred eeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-----eeEeCCCcEECCCeEEccCCCc
Q 013483 337 HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-----ECIIDKNARIGKNVIIANSEGI 411 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-----~~~ig~~~~ig~~~~~~~~~~~ 411 (442)
+++||++|.||++|.|+.++.+|++ +.+++++.+. .++||++|.||+|++|.
T Consensus 183 gvvIG~~~~IG~~v~I~~~vtIG~~------------------~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Il----- 239 (313)
T 3q1x_A 183 GVVIGETAIIGEWCRIYQSVTLGAM------------------HFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVL----- 239 (313)
T ss_dssp TCEECTTCEECSSCEECTTCEEECC------------------CCCCTTCCCCCCSSCSCEECSSCEECTTCEEE-----
T ss_pred ceEECCCcEECCCCEECCCcEEeCC------------------cEECCCceEcCCCccCCEECCCCEECCCCEEC-----
Confidence 4677777777777777777777665 5666666664 34888888888888885
Q ss_pred ccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 412 QEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 412 ~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
...+||++++||+|++| +.+++.+
T Consensus 240 -ggv~IG~~a~IGagsvV~~dVp~gs~v 266 (313)
T 3q1x_A 240 -GNIIVGSHVRIGANCWIDRDVDSNQTV 266 (313)
T ss_dssp -SSCEECSSEEECTTCEECSCBCSSEEC
T ss_pred -CCcEECCCCEECCCCEECCCcCCCCEE
Confidence 35678888999888887 5566655
No 129
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.03 E-value=1.4e-09 Score=98.20 Aligned_cols=92 Identities=13% Similarity=0.170 Sum_probs=63.4
Q ss_pred eEEcCCCEEe-ceEEe----eeEEcCCcEECCCCEEe---ceEEECCccccchhhhhhhhcCCCcceEeCCCcEeee---
Q 013483 322 SIISHGSFIT-SSFIE----HSVVGIRSRINANVHLK---DTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE--- 390 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i~----~~~ig~~~~i~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~--- 390 (442)
+.||++|.|+ .+.+. +++||++|.|++++.+. ..+.+|++ |.|+++|.|.+
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~------------------~~Ig~~~~I~~~~~ 120 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKD------------------CMLAHGYEIRNTDM 120 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTT------------------CEECTTEEEESCCS
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCC------------------CEEcCCEEEECCCC
Confidence 7788888888 45553 27888888888755443 45666765 77777777764
Q ss_pred -----------------eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEc
Q 013483 391 -----------------CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVIT 437 (442)
Q Consensus 391 -----------------~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~ 437 (442)
++||++|.||+++++.. ..+||+++.|+++++| ++++++++
T Consensus 121 h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~------gv~Ig~~~vIgagsvV~~~vp~~~i~~ 181 (215)
T 2wlg_A 121 HPIYSLENGERINHGKDVIIGNHVWLGRNVTILK------GVCIPNNVVVGSHTVLYKSFKEPNCVI 181 (215)
T ss_dssp SCEEETTTCBBCCCCCCEEECTTCEECTTCEECT------TCEECSSCEECTTCEECSCCCCCSCEE
T ss_pred cccccccccccccCCCCeEECCCcEECCCCEECC------CCEECCCCEECCCCEEcCccCCCeEEE
Confidence 36777777777777653 5577788888888776 55666555
No 130
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.03 E-value=4.3e-10 Score=100.27 Aligned_cols=77 Identities=26% Similarity=0.322 Sum_probs=56.4
Q ss_pred eeEEcCCcEECCCCEEece--EEECCccccchhhhhhhhcCCCcceEeCCCcEee-------------------eeEeCC
Q 013483 337 HSVVGIRSRINANVHLKDT--MMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-------------------ECIIDK 395 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-------------------~~~ig~ 395 (442)
++.||++|.|++++.|.++ +.+|++ |.||++|.|. .++||+
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~------------------v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 135 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDN------------------VFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGS 135 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSS------------------EEECTTCEEECEECCSSHHHHHTTEEEECCEEECS
T ss_pred CcEECCCeEECCCeEEecCCEEEECCC------------------CEECCCCEEecCCCcCccccccccceecCCeEEcC
Confidence 6899999999999999654 788887 8899999883 335666
Q ss_pred CcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEc
Q 013483 396 NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVIT 437 (442)
Q Consensus 396 ~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~ 437 (442)
+|.||.+++|. ..++||+++.||+|++| |.+++++.
T Consensus 136 ~v~IG~~~~I~------~gv~IG~~~vIgagsvV~~dvp~~~v~~ 174 (199)
T 3ftt_A 136 NTWFGGHVAVL------PGVTIGEGSVIGAGSVVTKDIPPHSLAV 174 (199)
T ss_dssp SEEECTTCEEC------TTCEECTTCEECTTCEECSCBCTTEEEE
T ss_pred CcEEcCCCEEC------CCCEECCCCEECCCCEECcccCCCCEEE
Confidence 66666666665 35678888888888777 55555443
No 131
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.03 E-value=2.7e-09 Score=99.18 Aligned_cols=57 Identities=18% Similarity=0.321 Sum_probs=28.6
Q ss_pred eEeCCCcEeee---------eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE-EcCCcEEcC
Q 013483 380 VGIGENTKIKE---------CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV-ILKNSVITD 438 (442)
Q Consensus 380 ~~i~~~~~i~~---------~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-i~~~~~v~~ 438 (442)
|.|+++|.|.. +.||++|.||+|++| ...+.+.++||.|+.|..++.| +.++.++.+
T Consensus 214 v~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI--gVtIGd~~iIGAGSVVtkdt~I~~~~g~~v~a 280 (332)
T 3fsy_A 214 SDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL--GISLGDDCVVEAGLYVTAGTRVTMPDSNSVKA 280 (332)
T ss_dssp CEECTTCEECSBCC---CCBCEECTTCEECTTCEE--CSCBCSSCEECTTCEECTTCEEECTTSCEEEG
T ss_pred CEECCCCEEcCCCCCCCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEEeCCCCEEEh
Confidence 55555555542 666666666666666 3333333344444444444333 334444444
No 132
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.02 E-value=5.1e-10 Score=105.75 Aligned_cols=28 Identities=36% Similarity=0.564 Sum_probs=18.4
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEcc
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIAN 407 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~~ 407 (442)
|.||++|.|. ++.||++|.||+|+++..
T Consensus 230 v~IGaga~Ilggv~IG~~a~IGagsvV~~ 258 (313)
T 3q1x_A 230 VTIGTGAKVLGNIIVGSHVRIGANCWIDR 258 (313)
T ss_dssp CEECTTCEEESSCEECSSEEECTTCEECS
T ss_pred CEECCCCEECCCcEECCCCEECCCCEECC
Confidence 6666666664 567777777777776643
No 133
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.00 E-value=1.9e-09 Score=95.67 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=36.9
Q ss_pred cccCccCCCceecCCce-eeeEEcCCCEEe-ceEEe---eeEEcCCcEECCCCEEeceEEECC
Q 013483 303 YTSRRNLPPSKIDDSKI-VDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDTMMLGA 360 (442)
Q Consensus 303 ~~~~~~~~~~~i~~~~i-~~~~i~~~~~i~-~~~i~---~~~ig~~~~i~~~~~i~~~~~~~~ 360 (442)
...+.+.+|... .+ .++.||+++.|+ ++.+. .++||++|.|++++.|.......+
T Consensus 60 g~~~~I~~p~~~---~ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~ 119 (195)
T 3nz2_A 60 GHKSCVQPPFHC---EFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLD 119 (195)
T ss_dssp CTTCEECSSEEE---SCSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSS
T ss_pred CCCcEEcCCeEE---EeCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcc
Confidence 344555665433 11 157778888887 56662 359999999999999988765544
No 134
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.99 E-value=1.5e-09 Score=96.00 Aligned_cols=76 Identities=24% Similarity=0.267 Sum_probs=54.5
Q ss_pred eeEEcCCcEECCCCEEec--eEEECCccccchhhhhhhhcCCCcceEeCCCcEeee-------------------eEeCC
Q 013483 337 HSVVGIRSRINANVHLKD--TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE-------------------CIIDK 395 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~-------------------~~ig~ 395 (442)
++.||+++.|++++.|.+ .+.+|++ |.|+++|.|.+ ++||+
T Consensus 78 ~v~IG~~~~I~~~~~i~~~~~v~IG~~------------------~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~ 139 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILDVCEVRIGDH------------------CMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGN 139 (190)
T ss_dssp TEEECTTCEECTTCEEECSSCEEECTT------------------CEECTTCEEECEECCSSHHHHTSSEEEECCEEECT
T ss_pred ceEECCceeeCCCeEEEeCCCeEECCc------------------eEEcCCcEEecCCccCchhhccccccccCCeEECC
Confidence 689999999999999986 6788887 88888888832 45666
Q ss_pred CcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 396 NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 396 ~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
+|.||++++|. ...+||+++.||+|++| |.+++++
T Consensus 140 ~v~IG~~~~I~------~gv~IG~~~vIgagsvV~~dvp~~~v~ 177 (190)
T 3hjj_A 140 NVWVGGGAIIN------PGVSIGDNAVIASGAVVTKDVPNNVVV 177 (190)
T ss_dssp TCEECTTCEEC------TTCEECTTCEECTTCEECSCBCTTEEE
T ss_pred CCEECCCCEEC------CCCEECCCCEECCCCEECcccCCCCEE
Confidence 66666666554 35567777777777666 4444444
No 135
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.98 E-value=3.4e-10 Score=102.57 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=26.4
Q ss_pred eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEc
Q 013483 390 ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVIT 437 (442)
Q Consensus 390 ~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~ 437 (442)
+++||++|.||.+++|.. .++||+++.||+|++| |.+++++.
T Consensus 119 ~v~IG~~v~IG~~a~I~~------gv~IG~gavIgagsvV~~dVp~~~vv~ 163 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMP------GVKIGDGAIIAAEAVVTKNVAPYSIVG 163 (220)
T ss_dssp CEEECSSCEECTTCEECT------TCEECTTCEECTTCEECSCBCTTEEEE
T ss_pred CeEECCCcEECCCCEEeC------CCEECCCCEEcCCCEEcccCCCCcEEe
Confidence 466777777777777653 3566777777777666 44555443
No 136
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.97 E-value=7.7e-10 Score=98.50 Aligned_cols=76 Identities=28% Similarity=0.342 Sum_probs=50.8
Q ss_pred eeEEcCCcEECCCCEEec--eEEECCccccchhhhhhhhcCCCcceEeCCCcEee-------------------eeEeCC
Q 013483 337 HSVVGIRSRINANVHLKD--TMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-------------------ECIIDK 395 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-------------------~~~ig~ 395 (442)
++.||+++.|++++.|.+ .+.+|++ |.||++|.|. .++||+
T Consensus 75 ~i~IG~~~~I~~~~~i~~~~~i~IG~~------------------v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd 136 (203)
T 1krr_A 75 NIHIGRNFYANFNLTIVDDYTVTIGDN------------------VLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGN 136 (203)
T ss_dssp TEEECSSCEECSCEEEECSSCEEECSS------------------CEECSSCEEESEECCSSTTTCTTCCBEECCEEECT
T ss_pred CeEECCeeEECCccEEecccceEECCC------------------CEECCCCEEecCCcccchhhcccCceeCCCcEECC
Confidence 678888888888888865 3677776 7777777763 245555
Q ss_pred CcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 396 NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 396 ~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
+|.||.+++|. ..++||++++||+|++| |++++++
T Consensus 137 ~v~IG~~a~I~------~gv~IG~~~vIgagsvV~~dvp~~~vv 174 (203)
T 1krr_A 137 NVWIGSHVVIN------PGVTIGDNSVIGAGSIVTKDIPPNVVA 174 (203)
T ss_dssp TCEECTTCEEC------TTCEECTTCEECTTCEECSCBCTTEEE
T ss_pred CeEECCCCEEe------CCeEECCCCEECCCCEECCCcCCCcEE
Confidence 55555555554 35677777777777766 4555543
No 137
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.96 E-value=9.5e-10 Score=103.67 Aligned_cols=90 Identities=19% Similarity=0.187 Sum_probs=55.1
Q ss_pred eeEEcCCCEEeceEEeeeEE--cCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEee---------
Q 013483 321 DSIISHGSFITSSFIEHSVV--GIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK--------- 389 (442)
Q Consensus 321 ~~~i~~~~~i~~~~i~~~~i--g~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~--------- 389 (442)
++.|++++.|+. +++| |.+++|++++.|++++.++.+ |.||+++...
T Consensus 190 gv~I~p~a~IG~----~v~I~hg~gvvIG~~~~IG~~v~I~~g------------------vtIg~~~~~~~~~g~~i~~ 247 (310)
T 3f1x_A 190 GIDIHPGAQIGH----HFTIDHGTGVVIGATSIIGNNVKLYQG------------------VTLGAKSFPLDNNGNPIKG 247 (310)
T ss_dssp SCEECTTCEECS----SCEEESCTTCEECTTCEECSSCEEETT------------------CEEECC-------------
T ss_pred CcEECCCCEECC----CcEECCCCCeEECCceEEcCCCEECCC------------------CEECCCccccccccccccC
Confidence 345555555553 4455 556666666666665555544 5555554221
Q ss_pred ---eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEcC
Q 013483 390 ---ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVITD 438 (442)
Q Consensus 390 ---~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~~ 438 (442)
.++||++|.||+|++|. ..++||++++||+|++| |++++++..
T Consensus 248 ~~~~~~IGd~V~IGaga~Il------~gv~IGd~a~IGagsvV~~dVp~~svv~G 296 (310)
T 3f1x_A 248 IPRHPILEDDVIVYSNATIL------GRVTIGKGATVGGNIWVTENVPAGSRIVQ 296 (310)
T ss_dssp -CCSCEECTTCEECTTCEEE------SSCEECTTCEECSSCEECSCBCTTCEECC
T ss_pred CCCCCEECCCcEEcCCCEEC------CCcEECCCCEECCCCEECCccCCCcEEEC
Confidence 23677777777777776 35678888888888877 666666654
No 138
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.95 E-value=3.9e-09 Score=107.72 Aligned_cols=89 Identities=13% Similarity=0.281 Sum_probs=59.0
Q ss_pred eEEcCCCEEe-ceEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeee--------eE
Q 013483 322 SIISHGSFIT-SSFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE--------CI 392 (442)
Q Consensus 322 ~~i~~~~~i~-~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~--------~~ 392 (442)
+.|++++.|+ .+.+++++||++|.|+..+.|+++.+ |.+ |.||++|.+-| ++
T Consensus 353 ~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~I-g~~------------------v~IG~g~i~~n~dg~~~~~t~ 413 (501)
T 3st8_A 353 TALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADI-GEY------------------SNIGASSVFVNYDGTSKRRTT 413 (501)
T ss_dssp CEECTTCEEEETEEEESCEECTTCEEEESCEEESEEE-CSS------------------CEECTTCEEECBCSSSBCCEE
T ss_pred cEEccccccCCeEEEccceecCCcEEeccceecCceE-cCC------------------CEECCCEEEEcccCCcccCCE
Confidence 5566666666 44556666666666666666665433 433 66666666632 56
Q ss_pred eCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcE
Q 013483 393 IDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSV 435 (442)
Q Consensus 393 ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~ 435 (442)
||++|.||.++.+. ..++||++++||+|++| |.+++.
T Consensus 414 IGd~~~iG~~~~l~------~~v~Ig~~~~i~ags~v~~dvp~~~l 453 (501)
T 3st8_A 414 VGSHVRTGSDTMFV------APVTIGDGAYTGAGTVVREDVPPGAL 453 (501)
T ss_dssp ECTTCEECTTCEEE------SSEEECTTCEECTTCEECSCBCTTCE
T ss_pred ECCCcEECCCCEEc------CCcEECCCCEECCCCEECcccCCCCe
Confidence 66666666665554 57899999999999998 888875
No 139
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.94 E-value=3.2e-09 Score=102.32 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=17.8
Q ss_pred EEecceeeecCC--hHHHHHHhhhhh
Q 013483 264 YLFNDYWEDIGT--IRSFFEANLALT 287 (442)
Q Consensus 264 ~~~~g~~~di~t--~~~~~~an~~~l 287 (442)
+....+|.+.+. |++|......+.
T Consensus 166 ~l~~~~Wt~~G~~~~~~f~~~~~~l~ 191 (387)
T 2rij_A 166 LLSNVAWSDDKPIELEYLRANEMRLK 191 (387)
T ss_dssp HSCCEEEETTEEECHHHHHHHHHHHH
T ss_pred cCceeeeccCcccCHHHHHHHHHHHH
Confidence 334568999988 788888877765
No 140
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.93 E-value=2.1e-09 Score=97.40 Aligned_cols=29 Identities=31% Similarity=0.495 Sum_probs=14.7
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEccC
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIANS 408 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~ 408 (442)
+.||++|.|+ +|+|.++++||++++|+..
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgag 149 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAE 149 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCC
Confidence 4555555554 4555555555555555443
No 141
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.93 E-value=4.9e-09 Score=92.47 Aligned_cols=51 Identities=10% Similarity=0.056 Sum_probs=33.7
Q ss_pred cccCccCCCceecCCceeeeEEcCCCEEe-ceEEe---eeEEcCCcEECCCCEEece
Q 013483 303 YTSRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDT 355 (442)
Q Consensus 303 ~~~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~---~~~ig~~~~i~~~~~i~~~ 355 (442)
...+.+.+++.+... .++.||+++.|+ .+.+. ..+||++|.|++++.|...
T Consensus 60 g~~~~I~~~~~~~~g--~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~ 114 (188)
T 3srt_A 60 GKQINVEQNIRCDYG--YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTA 114 (188)
T ss_dssp CSCEEECSCEEESSS--TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECE
T ss_pred CCCCEEcCCEEEEeC--CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeC
Confidence 445566666665210 257777777777 55553 4588999999998888554
No 142
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.92 E-value=1.9e-09 Score=95.09 Aligned_cols=70 Identities=26% Similarity=0.294 Sum_probs=54.7
Q ss_pred eeeEEcCCcEECCCCEEec--eEEECCccccchhhhhhhhcCCCcceEeCCCcEe-------------------eeeEeC
Q 013483 336 EHSVVGIRSRINANVHLKD--TMMLGADFYETDAEVASLLAEGRVPVGIGENTKI-------------------KECIID 394 (442)
Q Consensus 336 ~~~~ig~~~~i~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i-------------------~~~~ig 394 (442)
.++.||+++.|++++.|.+ .+.+|++ |.||++|.| ..++||
T Consensus 75 ~~~~IG~~~~i~~~~~i~~~~~i~IG~~------------------~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG 136 (188)
T 3srt_A 75 YNIHVGENFFANYDCIFLDVCKIEIGDN------------------VMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIG 136 (188)
T ss_dssp TTEEECTTEEECTTEEEECSSCEEECSS------------------CEECTTCEEECEECCSSHHHHHTTEEEECCEEEC
T ss_pred CCeEECCcccccCceEEecCCceEECCe------------------eEECCCcEEeeCCccCchhhccccceECCCcEEC
Confidence 3789999999999999976 5677877 888888888 356777
Q ss_pred CCcEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 395 KNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 395 ~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
++|.||.+++|.. ..+||++++||+|++|
T Consensus 137 ~~v~IG~~~~I~~------gv~IG~~~vIgagsvV 165 (188)
T 3srt_A 137 DNVWIGGGVIITP------GITIGDNVVIGAGSVV 165 (188)
T ss_dssp SSCEECTTCEECT------TCEECSSEEECTTCEE
T ss_pred CCcEEcCCCEECC------CcEECCCCEECCCCEE
Confidence 7777777777753 4678888888888777
No 143
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.92 E-value=4.4e-09 Score=93.69 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=56.4
Q ss_pred cccCccCCCceec-CCceeeeEEcCCCEEe-ceEE---eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCC
Q 013483 303 YTSRRNLPPSKID-DSKIVDSIISHGSFIT-SSFI---EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGR 377 (442)
Q Consensus 303 ~~~~~~~~~~~i~-~~~i~~~~i~~~~~i~-~~~i---~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (442)
..++.+.+++.+. + .++.||++|.|+ .+.| ..++||++|.|++++.|..+....+. ........-.
T Consensus 58 g~~~~i~~~~~~~~g---~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~------~~~~~~~~~~ 128 (199)
T 3ftt_A 58 TDNVSISIPFDTDYG---WNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNF------HHRNEGFEKA 128 (199)
T ss_dssp CSSEEECSSEEESSS---TTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSH------HHHHTTEEEE
T ss_pred CCCeEEeCCEEEEec---CCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCcc------ccccccceec
Confidence 3345566666652 2 156777777777 5666 24799999999999999665432211 0000000001
Q ss_pred cceEeCCCcEee-eeEeCCCcEECCCeEEccCCCc
Q 013483 378 VPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGI 411 (442)
Q Consensus 378 ~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~ 411 (442)
.|+.||++|+|+ +|+|.++++||++++|+....+
T Consensus 129 ~~v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV 163 (199)
T 3ftt_A 129 GPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVV 163 (199)
T ss_dssp CCEEECSSEEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCeEEcCCcEEcCCCEECCCCEECCCCEECCCCEE
Confidence 126666666665 5666666666666666554433
No 144
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.91 E-value=7.8e-09 Score=91.36 Aligned_cols=98 Identities=20% Similarity=0.224 Sum_probs=56.7
Q ss_pred cCccCCCceec-CCceeeeEEcCCCEEe-ceEEe---eeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcc
Q 013483 305 SRRNLPPSKID-DSKIVDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVP 379 (442)
Q Consensus 305 ~~~~~~~~~i~-~~~i~~~~i~~~~~i~-~~~i~---~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (442)
++.+.+++.+. + .++.||+++.|+ .+.+. .++||++|.|++++.|..+....+.. ..........|
T Consensus 64 ~~~I~~~~~~~~g---~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~------~~~~~~~~~~~ 134 (190)
T 3hjj_A 64 KAQINPDFRCDYG---YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPV------ERNSGKEYGKP 134 (190)
T ss_dssp CCEECSSCEESSS---TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHH------HHTSSEEEECC
T ss_pred CcEECCCEEEEeC---CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchh------hccccccccCC
Confidence 45566666551 2 157777777777 56663 67899999999999997654433210 00000000112
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEccCCCc
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIANSEGI 411 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~ 411 (442)
+.||++|+|+ +|+|.++++||++|+|+....+
T Consensus 135 v~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV 167 (190)
T 3hjj_A 135 VKIGNNVWVGGGAIINPGVSIGDNAVIASGAVV 167 (190)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred eEECCCCEECCCCEECCCCEECCCCEECCCCEE
Confidence 6666666665 5666666666666666554433
No 145
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.90 E-value=2e-09 Score=94.62 Aligned_cols=79 Identities=23% Similarity=0.267 Sum_probs=60.7
Q ss_pred eeEEcCCcEECCCCEEe--ceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-------------------eeEeCC
Q 013483 337 HSVVGIRSRINANVHLK--DTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-------------------ECIIDK 395 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-------------------~~~ig~ 395 (442)
++.||+++.|++++.|. ..+.+|++ |.|+++|.|. .++||+
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~------------------v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd 135 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDH------------------CFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGH 135 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTT------------------CEECTTCEEECEECCSSHHHHHTCCBEECCEEECS
T ss_pred CEEECCeeEEcCCeEEEeccceEECCC------------------cEEeCCCEEEcCCCcCChhhcccCccccCCeEEcC
Confidence 67889999999998885 56778877 8888888883 467777
Q ss_pred CcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEcCC
Q 013483 396 NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVITDG 439 (442)
Q Consensus 396 ~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~~~ 439 (442)
+|.||+++++. ..++||++++||+|++| |+++++++++
T Consensus 136 ~v~IG~~~~I~------~gv~IG~~~vIgagsvV~~~vp~~~vv~G~ 176 (185)
T 2p2o_A 136 NVWIGGRAVIN------PGVTIGDNAVIASGAVVTKDVPANAVVGGN 176 (185)
T ss_dssp SCEECTTCEEC------TTCEECTTCEECTTCEECSCBCTTEEEEET
T ss_pred CeEECCCCEEC------CCCEECCCCEECCCCEECCCCCCCcEEEcc
Confidence 77777777775 35688999999999887 6666666544
No 146
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.90 E-value=6.5e-09 Score=91.34 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=27.0
Q ss_pred eeEEcCCCEEe-ceEE---eeeEEcCCcEECCCCEEec
Q 013483 321 DSIISHGSFIT-SSFI---EHSVVGIRSRINANVHLKD 354 (442)
Q Consensus 321 ~~~i~~~~~i~-~~~i---~~~~ig~~~~i~~~~~i~~ 354 (442)
++.||+++.+. .+.+ .+++||++|.|++++.|..
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~ 111 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYT 111 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEEC
T ss_pred CEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEc
Confidence 56777787777 5555 4689999999999999954
No 147
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.87 E-value=3.4e-09 Score=92.86 Aligned_cols=78 Identities=18% Similarity=0.246 Sum_probs=57.9
Q ss_pred eeEEcCCcEECCCCEEe--ceEEECCccccchhhhhhhhcCCCcceEeCCCcEee-------------------eeEeCC
Q 013483 337 HSVVGIRSRINANVHLK--DTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIK-------------------ECIIDK 395 (442)
Q Consensus 337 ~~~ig~~~~i~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-------------------~~~ig~ 395 (442)
++.||+++.|++++.|. ..+.+|++ |.|+++|.|. +++||+
T Consensus 72 ~v~IG~~~~I~~~~~i~~~~~i~IG~~------------------v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~ 133 (182)
T 1ocx_A 72 NIFLGNNFFANFDCVMLDVCPIRIGDN------------------CMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGN 133 (182)
T ss_dssp TEEECSSEEECSSEEEECSSCEEECTT------------------CEECTTCEEECEECCSSHHHHTTTCBEECCEEECT
T ss_pred CEEECCCcEEeCCeEEEeccceEEcCC------------------cEEeCCcEEEeCCCccChhhcccCccccCCeEEeC
Confidence 67889999999999885 46777876 8888888882 466677
Q ss_pred CcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEcC
Q 013483 396 NARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVITD 438 (442)
Q Consensus 396 ~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~~ 438 (442)
+|.||++++|. ..++||++++||+|++| |+++++++.
T Consensus 134 ~v~Ig~~a~I~------~gv~IG~~~vIgagsvV~~dip~~~vv~G 173 (182)
T 1ocx_A 134 NVWIGGRAVIN------PGVTIGDNVVVASGAVVTKDVPDNVVVGG 173 (182)
T ss_dssp TCEECTTCEEC------TTCEECTTCEECTTCEECSCBCSSEEEET
T ss_pred CeEECCCCEEC------CCcEECCCCEECCCCEECCcCCCCcEEEc
Confidence 77777776665 35678888888888777 555555543
No 148
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.87 E-value=1e-08 Score=89.76 Aligned_cols=96 Identities=21% Similarity=0.245 Sum_probs=51.3
Q ss_pred cCccCCCceec-CCceeeeEEcCCCEEe-ceEE---eeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcc
Q 013483 305 SRRNLPPSKID-DSKIVDSIISHGSFIT-SSFI---EHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVP 379 (442)
Q Consensus 305 ~~~~~~~~~i~-~~~i~~~~i~~~~~i~-~~~i---~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (442)
.+.+.+++... + .++.||+++.|. .+.+ ..++||++|.|++++.|.....--. . .......+...|
T Consensus 58 ~~~I~~~~~~~~g---~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~-----~-~~~~~~~~~~~~ 128 (182)
T 1ocx_A 58 EAYIEPTFRCDYG---YNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPID-----P-VARNSGAELGKP 128 (182)
T ss_dssp SEEECSCEEESSS---TTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSS-----H-HHHTTTCBEECC
T ss_pred CEEEeCCEEEEeC---CCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccC-----h-hhcccCccccCC
Confidence 34556664431 1 156777777777 5555 3579999999999999964321100 0 000000000112
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEccCC
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIANSE 409 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~ 409 (442)
+.||++|+|+ +|+|.++++||++++|+...
T Consensus 129 v~IG~~v~Ig~~a~I~~gv~IG~~~vIgags 159 (182)
T 1ocx_A 129 VTIGNNVWIGGRAVINPGVTIGDNVVVASGA 159 (182)
T ss_dssp EEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred eEEeCCeEECCCCEECCCcEECCCCEECCCC
Confidence 5666666665 56655566666665555433
No 149
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.84 E-value=1.6e-08 Score=90.01 Aligned_cols=102 Identities=20% Similarity=0.160 Sum_probs=61.4
Q ss_pred cccCccCCCceec-CCceeeeEEcCCCEEe-ceEEe---eeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCC
Q 013483 303 YTSRRNLPPSKID-DSKIVDSIISHGSFIT-SSFIE---HSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGR 377 (442)
Q Consensus 303 ~~~~~~~~~~~i~-~~~i~~~~i~~~~~i~-~~~i~---~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (442)
..++.|.+++.+. + .++.||+++.|+ .+.+. .++||++|.|++++.|.....-.+. ..+ ....+-.
T Consensus 59 g~~~~I~~~~~~~~g---~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~-~~~-----~~~~~~~ 129 (203)
T 1krr_A 59 GENAWVEPPVYFSYG---SNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHH-ELR-----KNGEMYS 129 (203)
T ss_dssp CSSCEECSCEEESCS---TTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSST-TTC-----TTCCBEE
T ss_pred CCCcEEcCCeEEEeC---CCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccch-hhc-----ccCceeC
Confidence 4455666665541 1 267888888888 66663 3799999999999998754321110 000 0000011
Q ss_pred cceEeCCCcEee-eeEeCCCcEECCCeEEccCCCccc
Q 013483 378 VPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQE 413 (442)
Q Consensus 378 ~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~~ 413 (442)
.|+.||++|+|+ +|+|.++++||++++|+....+.+
T Consensus 130 ~~v~IGd~v~IG~~a~I~~gv~IG~~~vIgagsvV~~ 166 (203)
T 1krr_A 130 FPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTK 166 (203)
T ss_dssp CCEEECTTCEECTTCEECTTCEECTTCEECTTCEECS
T ss_pred CCcEECCCeEECCCCEEeCCeEECCCCEECCCCEECC
Confidence 237777777776 677777777777777766544433
No 150
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.82 E-value=5.5e-09 Score=100.70 Aligned_cols=14 Identities=21% Similarity=0.392 Sum_probs=7.4
Q ss_pred eEeCCCcEECCCeE
Q 013483 391 CIIDKNARIGKNVI 404 (442)
Q Consensus 391 ~~ig~~~~ig~~~~ 404 (442)
++||++|.||++++
T Consensus 291 VvIGdnv~IGagAv 304 (387)
T 2rij_A 291 ISVGKACLLGANSV 304 (387)
T ss_dssp CEECTTCEECTTCE
T ss_pred eEEeCCCEECCCCc
Confidence 45555555555554
No 151
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.82 E-value=5.6e-09 Score=97.12 Aligned_cols=51 Identities=20% Similarity=0.184 Sum_probs=32.1
Q ss_pred eEeCCCcEeee---------eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 380 VGIGENTKIKE---------CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 380 ~~i~~~~~i~~---------~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
|.|++++.|++ ++||++|.||++++|.. ..+||+++.||+|++| |.+++++
T Consensus 197 v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~------gv~IG~~a~IGagsvV~kdVp~~svv 259 (287)
T 3mc4_A 197 VSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILG------NIQVGQCSKIAAGSVVLKSVPHNVTV 259 (287)
T ss_dssp CEEETTCEEEC-----CCCSCEECTTCEECTTCEEES------SCEECTTCEECTTCEECSCBCTTEEE
T ss_pred CEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECC------CcEECCCCEECCCCEEccccCCCCEE
Confidence 45555555543 57777777777777763 4567777777777766 4444443
No 152
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.81 E-value=6e-08 Score=96.64 Aligned_cols=357 Identities=13% Similarity=0.108 Sum_probs=182.0
Q ss_pred ccceEEEEEeCCCCCCCcccccCCCccceeec-Cccceehhhhhhhhhc----CC-cEEEEEeccC-hhhHHHHHHhhcc
Q 013483 6 ARTVAAVILGGGAGTRLYPLTKQRAKPAVPIG-GAYRLIDVPMSNCINS----GI-NKVYILTQYN-SASLNRHLARAYN 78 (442)
Q Consensus 6 ~~~~~aVILAaG~gtRl~plt~~~pK~Llpi~-g~~pli~~~l~~l~~~----gi-~~i~iv~~~~-~~~i~~~~~~~~~ 78 (442)
-.++.+|+||||.||||+ ...||.++|+. ++ ++++..++++.+. |. -..+|.+... .+...+++++...
T Consensus 125 l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~ 200 (528)
T 3r3i_A 125 LNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 200 (528)
T ss_dssp CTTEEEEEECCCBCTTTT---CSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT
T ss_pred cCceEEEEeCCCCccccC---CCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc
Confidence 478999999999999997 78999999998 66 9999999998775 43 3556666654 4577777765432
Q ss_pred CCCCccc-CCceEEEeccccc---C-------CcCCCccccChHHHHHHh--hhhhcCCCCCccCeEEEEcCCeeeecCH
Q 013483 79 YGSGVTF-GDGCVEVLAATQT---P-------GEAGKRWFQGTADAVRQF--HWLFEDPRNKVIEDVLILSGDHLYRMDY 145 (442)
Q Consensus 79 ~~~~~~~-~~~~v~i~~~~~~---~-------~~~~~~~~~G~~~al~~~--~~~l~~~~~~~~~~~lv~~gD~i~~~~l 145 (442)
++....+ ....+..+..+.. + ...-.-.|.|.|+..... ...++++...+.+++.+.+.|.+...--
T Consensus 201 fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vD 280 (528)
T 3r3i_A 201 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 280 (528)
T ss_dssp SSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCC
T ss_pred cCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccC
Confidence 3221111 0000000000000 0 000011345555443332 2233333223457999999999543222
Q ss_pred HHHHHHHHHc----CCcEEEEEeecCCCcCCcccEEEEcCCCceEEEEeCCCccccccccccccccccccccccccccee
Q 013483 146 MDFVQNHRQS----GADITISCLPMDDSRASDFGLMKINNEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKPYIA 221 (442)
Q Consensus 146 ~~~l~~~~~~----~~~~tl~~~~~~~~~~~~~g~v~~d~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (442)
..++..+... ++++.+-+.+...++ +.-|.++. .+|+. .+.|...-++... + .... . ..-.+.
T Consensus 281 p~~Lg~~~~~~~~~~~d~~~kVv~Kt~~d-ek~Gvl~~-~dGk~-~vvEyseip~e~~---~-----~~~g-~-~~f~~~ 347 (528)
T 3r3i_A 281 LYILNHLMNPPNGKRCEFVMEVTNKTRAD-VKGGTLTQ-YEGKL-RLVEIAQVPKAHV---D-----EFKS-V-SKFKIF 347 (528)
T ss_dssp HHHHHHHSSCSSSCCCSEEEEECCCCTTC-CSSCEEEC-SSSSC-EEECTTSSCGGGT---T-----TSSC-S-SSCCCC
T ss_pred HHHHHHHHhcccccCCcEEEEEeEccccC-CcccEEEE-ECCeE-EEEEecCCChhHh---h-----ccCC-c-ccCCeE
Confidence 2456666665 788887766544322 33455554 35554 3445444332110 0 0001 1 122456
Q ss_pred eeeEEEEeHHHHHHHHhhhCCCCc-------------ccc-cchhhhcccc-cceEEEEec-ceeeecCChHHHHHHhhh
Q 013483 222 SMGVYLFKKEILLNLLRWRFPTAN-------------DFG-SEIIPASANE-QFLKAYLFN-DYWEDIGTIRSFFEANLA 285 (442)
Q Consensus 222 ~~Giy~~~~~~l~~~l~~~~~~~~-------------~~~-~~~l~~~i~~-~~i~~~~~~-g~~~di~t~~~~~~an~~ 285 (442)
++....|+-+.+.++++....... -+. +.++-.+++- .+..++.++ ..|.-+.+..|++-...+
T Consensus 348 Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~sdLll~~Sd 427 (528)
T 3r3i_A 348 NTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVMSN 427 (528)
T ss_dssp EEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHHHHHHHHST
T ss_pred EEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchHHHHHHhcc
Confidence 889999999999888875311100 010 1122222221 122223332 348888999999877665
Q ss_pred hhcCCCCccccCCCC--cccccCccCCCceecCCceee--eEEcCCCEEeceEEeeeEEcCCcEECCCCEEeceEEECCc
Q 013483 286 LTAHPPMFSFYDATK--PIYTSRRNLPPSKIDDSKIVD--SIISHGSFITSSFIEHSVVGIRSRINANVHLKDTMMLGAD 361 (442)
Q Consensus 286 ~l~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~i~~--~~i~~~~~i~~~~i~~~~ig~~~~i~~~~~i~~~~~~~~~ 361 (442)
+.....+.-...+.. +..+.+..++. + ..|.+ ..+..--.+ ....+-+|-.++..|.++++...+++-++
T Consensus 428 ly~l~~g~l~~~~~r~~~~~P~v~L~~~--~--~~v~~f~~rf~~iP~l--~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~ 501 (528)
T 3r3i_A 428 LYSLNAGSLTMSEKREFPTVPLVKLGSS--F--TKVQDYLRRFESIPDM--LELDHLTVSGDVTFGKNVSLKGTVIIIAN 501 (528)
T ss_dssp TSEEETTEEECCSSCSSCCCCEEEECTT--S--CSHHHHHHHCSSCCEE--EEEEEEEEESEEECCTTCEEEEEEEEECC
T ss_pred eeEeeCCeEEecccccCCCCCEEEeCcc--c--CcHHHHHHhCCCCCCc--ccCCEEEEecceEECCCcEEEEEEEEEcC
Confidence 543222211111111 11112222222 1 11110 111110001 11124566678888888888888888432
Q ss_pred cccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEE
Q 013483 362 FYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARI 399 (442)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~i 399 (442)
++ .+..|-+++++.|.+|-.+.+|
T Consensus 502 -------------~g-~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 502 -------------HG-DRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp -------------TT-CEEECCTTCEEEEEEEC-----
T ss_pred -------------CC-CceecCCCCEEeccEEeccccc
Confidence 11 2378999999999988766655
No 153
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.81 E-value=1.1e-08 Score=96.47 Aligned_cols=27 Identities=15% Similarity=0.235 Sum_probs=13.1
Q ss_pred EeCCCcEee-eeEeCCCcEECCCeEEcc
Q 013483 381 GIGENTKIK-ECIIDKNARIGKNVIIAN 407 (442)
Q Consensus 381 ~i~~~~~i~-~~~ig~~~~ig~~~~~~~ 407 (442)
.||++|+|+ +|.|..+++||++++|+.
T Consensus 253 ~IGd~V~IGaga~Il~gv~IGd~a~IGa 280 (310)
T 3f1x_A 253 ILEDDVIVYSNATILGRVTIGKGATVGG 280 (310)
T ss_dssp EECTTCEECTTCEEESSCEECTTCEECS
T ss_pred EECCCcEEcCCCEECCCcEECCCCEECC
Confidence 555555554 444444444444444443
No 154
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.80 E-value=1.2e-08 Score=94.37 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=52.6
Q ss_pred EEcCCcEEC--CCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeee---------eEeCCCcEECCCeEEcc
Q 013483 339 VVGIRSRIN--ANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE---------CIIDKNARIGKNVIIAN 407 (442)
Q Consensus 339 ~ig~~~~i~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~---------~~ig~~~~ig~~~~~~~ 407 (442)
.||+++.|+ .+++|++.+++|++ |.|+++++|++ ++||++|.||+|++|.+
T Consensus 145 ~IG~g~~I~~~~~vvIG~~~~IG~~------------------v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~ 206 (267)
T 1ssq_A 145 KIGHGIMFDHATGIVVGETSVIEND------------------VSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILG 206 (267)
T ss_dssp EECSSCEESSCTTCEECTTCEECTT------------------CEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEES
T ss_pred EECCCEEECCCCceEECCeeEECCC------------------CEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeC
Confidence 445555555 46778877777776 78888888875 57888888888777763
Q ss_pred CCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 408 SEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 408 ~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
..+||+++.||+|++| |.+++++
T Consensus 207 ------gv~IG~~a~IGagsvV~~dVp~~~~v 232 (267)
T 1ssq_A 207 ------NIEVGKYAKIGANSVVLNPVPEYATA 232 (267)
T ss_dssp ------SCEECTTCEECTTCEECSCBCTTCEE
T ss_pred ------CcEECCCCEECCCCEEccCCCCCCEE
Confidence 4678888888888777 5555544
No 155
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.79 E-value=1.3e-08 Score=94.70 Aligned_cols=27 Identities=22% Similarity=0.357 Sum_probs=17.9
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEc
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIA 406 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~ 406 (442)
|.||++|.|. ++.||++|+||+|+++.
T Consensus 223 v~IGaga~Il~gv~IG~~a~IGagsvV~ 250 (287)
T 3mc4_A 223 VLIGAGAKILGNIQVGQCSKIAAGSVVL 250 (287)
T ss_dssp CEECTTCEEESSCEECTTCEECTTCEEC
T ss_pred CEECCCCEECCCcEECCCCEECCCCEEc
Confidence 5666666664 56677777777777665
No 156
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.76 E-value=1.7e-08 Score=94.10 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=50.2
Q ss_pred EEcCCcEEC--CCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeee---------eEeCCCcEECCCeEEcc
Q 013483 339 VVGIRSRIN--ANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKE---------CIIDKNARIGKNVIIAN 407 (442)
Q Consensus 339 ~ig~~~~i~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~---------~~ig~~~~ig~~~~~~~ 407 (442)
.||+++.|+ .+++|++.+++|++ |.|+++|+|++ ++||++|.||++++|.+
T Consensus 165 ~IG~gv~I~~g~gvvIG~~~~IG~~------------------v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilg 226 (289)
T 1t3d_A 165 KIGRGIMLDHATGIVVGETAVIEND------------------VSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILG 226 (289)
T ss_dssp EECSSCEECSCTTCEECTTCEECSS------------------CEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEES
T ss_pred EEcCCEEECCCCceEECCCcEECCC------------------CEEcCCcEECCCccccCCCCeEECCCeEECCCCEEec
Confidence 444455554 46777777777776 77777777764 57777777777777753
Q ss_pred CCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 408 SEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 408 ~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
..+||+++.||+|++| |.+++++
T Consensus 227 ------gv~IG~~a~IGagsvV~~dVp~~s~v 252 (289)
T 1t3d_A 227 ------NIEVGRGAKIGAGSVVLQPVPPHTTA 252 (289)
T ss_dssp ------SCEECTTCEECTTCEECSCBCTTCEE
T ss_pred ------CcEECCCCEECCCCEEccCCCCCCEE
Confidence 5677888888888776 5555544
No 157
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.76 E-value=2.6e-08 Score=91.98 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=23.9
Q ss_pred cCeEE--EEcCCeeeecCHHHHHHHHHHcC
Q 013483 129 IEDVL--ILSGDHLYRMDYMDFVQNHRQSG 156 (442)
Q Consensus 129 ~~~~l--v~~gD~i~~~~l~~~l~~~~~~~ 156 (442)
.+++| ++++|.+...+|.+++.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 47889 99999999999999999887654
No 158
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.73 E-value=4.1e-08 Score=91.53 Aligned_cols=28 Identities=11% Similarity=0.013 Sum_probs=24.4
Q ss_pred cCeEE--EEcCCeeeecCHHHHHHHHHHcC
Q 013483 129 IEDVL--ILSGDHLYRMDYMDFVQNHRQSG 156 (442)
Q Consensus 129 ~~~~l--v~~gD~i~~~~l~~~l~~~~~~~ 156 (442)
.+++| ++++|.+...+|.+++.+|...+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 48999 99999999999999999987654
No 159
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.71 E-value=3.1e-08 Score=98.75 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=58.5
Q ss_pred eEEeeeEEcCCcEECCCCEEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEeCCCcEECCCeEEccCCCcc
Q 013483 333 SFIEHSVVGIRSRINANVHLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECIIDKNARIGKNVIIANSEGIQ 412 (442)
Q Consensus 333 ~~i~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~ig~~~~ig~~~~~~~~~~~~ 412 (442)
+.++++.||++|.| +++.|.++ ++|++ |.||++|.|.+|+||++|.||+++++.+
T Consensus 320 ~~i~~~~ig~~~~I-~~~~i~~~-~ig~~------------------~~I~~~~~i~~~~i~~~~~i~~~~~i~~----- 374 (420)
T 3brk_X 320 GSAVSSVVSGDCII-SGAALNRS-LLFTG------------------VRANSYSRLENAVVLPSVKIGRHAQLSN----- 374 (420)
T ss_dssp CEEESCEECSSCEE-ESCEEESC-EECTT------------------CEECTTCEEEEEEECTTCEECTTCEEEE-----
T ss_pred cEecCCEECCCCEE-cCCEEeCc-EEcCC------------------CEECCCCEEcceEEcCCCEECCCCEEec-----
Confidence 44568999999999 89999875 55665 9999999999999999999999999963
Q ss_pred cceeeCCCeEEccCcEE
Q 013483 413 EADRSAEGFYIRSGVTV 429 (442)
Q Consensus 413 ~~~~~~~~~~i~~~~~v 429 (442)
++||+++.||+|++|
T Consensus 375 --~~ig~~~~i~~~~~i 389 (420)
T 3brk_X 375 --VVIDHGVVIPEGLIV 389 (420)
T ss_dssp --EEECTTCEECTTCEE
T ss_pred --eEECCCCEECCCCEE
Confidence 567777777777665
No 160
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.65 E-value=2.7e-08 Score=100.08 Aligned_cols=101 Identities=24% Similarity=0.278 Sum_probs=73.8
Q ss_pred cCccCCCceecCCceeeeEEcCCCEEe-ceEEeeeEEcCC-------------------cEECCCCEEeceEEECCcccc
Q 013483 305 SRRNLPPSKIDDSKIVDSIISHGSFIT-SSFIEHSVVGIR-------------------SRINANVHLKDTMMLGADFYE 364 (442)
Q Consensus 305 ~~~~~~~~~i~~~~i~~~~i~~~~~i~-~~~i~~~~ig~~-------------------~~i~~~~~i~~~~~~~~~~~~ 364 (442)
++.|++++.+.++.+.+++||++|.|+ ++.|.++++..+ +.|++++.|+++ ++|++
T Consensus 330 ~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~-~Ig~~--- 405 (451)
T 1yp2_A 330 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRA-IIDKN--- 405 (451)
T ss_dssp EEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESE-EECTT---
T ss_pred CeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEecc-EeCCC---
Confidence 466777777755666789999999999 778866666555 899999998875 55655
Q ss_pred chhhhhhhhcCCCcceEeCCCcEeee-eEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE
Q 013483 365 TDAEVASLLAEGRVPVGIGENTKIKE-CIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV 429 (442)
Q Consensus 365 ~~~~~~~~~~~~~~~~~i~~~~~i~~-~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 429 (442)
|.||++|.|.+ +.++.+.+||+++.++... ++||++++||+|++|
T Consensus 406 ---------------~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~-----v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 406 ---------------ARIGDNVKIINKDNVQEAARETDGYFIKSGI-----VTVIKDALIPSGIII 451 (451)
T ss_dssp ---------------CEECTTCEECCSSCCSCEEEGGGTEEEETTE-----EEECTTCEECTTCBC
T ss_pred ---------------cEECCCCEEeCCcccccCceeCCCEEEcCCE-----EEECCCcEECCCccC
Confidence 89999999874 4555555677777776422 677888888777653
No 161
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.61 E-value=4.7e-08 Score=87.97 Aligned_cols=43 Identities=21% Similarity=0.341 Sum_probs=28.2
Q ss_pred eeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEc
Q 013483 389 KECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVIT 437 (442)
Q Consensus 389 ~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~ 437 (442)
++++||++|.||.++++.. ..+||+++.||++++| |.++++++
T Consensus 117 g~v~Igd~v~IG~~a~I~~------gv~IG~~~~IgagsvV~~dv~~~~~~~ 162 (219)
T 4e8l_A 117 GDIEIGNDVWIGRDVTIMP------GVKIGDGAIIAAEAVVTKNVAPYSIVG 162 (219)
T ss_dssp CCEEECSSCEECTTCEECT------TCEECTTCEECTTCEECSCBCTTEEEE
T ss_pred CCcEECCCeEECCCCEEcC------CCEECCCCEECCCCEEcccCCCCeEEE
Confidence 4577777777777777753 4567777777777666 55555543
No 162
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.56 E-value=7.3e-08 Score=86.62 Aligned_cols=90 Identities=9% Similarity=0.061 Sum_probs=57.4
Q ss_pred eeeEEcCCcEECCCCEEeceE---EECCccccchhhhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEEccC---
Q 013483 336 EHSVVGIRSRINANVHLKDTM---MLGADFYETDAEVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIANS--- 408 (442)
Q Consensus 336 ~~~~ig~~~~i~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~--- 408 (442)
+++++++++.||+++.|.+.. .++++ . ..+++.+.+. ++.||++|.|+++|++...
T Consensus 17 ~~vv~~~~v~IG~~t~I~~~~~~~~~~~~---------------~--~~i~~~~~i~~~v~IG~~~~I~~~v~i~~~~~~ 79 (212)
T 3eev_A 17 DQQVTNPNIIVGKHSYYSGYYHGHSFDDC---------------V--RYLHPERDDVDKLVIGSFCSIGSGAVFMMAGNQ 79 (212)
T ss_dssp GGTCCCTTEEECSSCEECCGGGCSCGGGG---------------E--ETCCSSCSSSCCEEECSSCEECTTCEEECSTTT
T ss_pred hheeeCCCeEECCCeEEccccCccccccc---------------e--eEECCCccccCCcEECCCCEECCCCEEEeCCCC
Confidence 467888899999999987411 11111 0 2344444443 5666666666666655211
Q ss_pred --------------------------CCcccceeeCCCeEEccCcEE-----EcCCcEEcCCccC
Q 013483 409 --------------------------EGIQEADRSAEGFYIRSGVTV-----ILKNSVITDGFVI 442 (442)
Q Consensus 409 --------------------------~~~~~~~~~~~~~~i~~~~~v-----i~~~~~v~~~~~i 442 (442)
..+...++||+++|||.+++| ||++++||+||+|
T Consensus 80 ~h~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV 144 (212)
T 3eev_A 80 GHRSDWISTFPFFYQDNDNFADARDGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVV 144 (212)
T ss_dssp TCCTTSSCCSCGGGSCCGGGTTCCCCCCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cccccceeeccceeecccccccccCCcccCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEE
Confidence 113345688888888888887 8888888888864
No 163
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.55 E-value=9.2e-08 Score=85.98 Aligned_cols=42 Identities=24% Similarity=0.348 Sum_probs=27.0
Q ss_pred eeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEEc
Q 013483 390 ECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVIT 437 (442)
Q Consensus 390 ~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v~ 437 (442)
+++||++|.||.+++|.. .++||+++.||+|++| |+++++++
T Consensus 111 ~v~IG~~v~IG~~a~I~~------gv~IG~~~iIgagsvV~~dVp~~~vv~ 155 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMP------GVKIGHGAIIASRSVVTKDVAPYEVVG 155 (212)
T ss_dssp CEEECSSCEECTTCEECT------TCEECTTCEECTTCEECSCBCTTEEEE
T ss_pred CeEECCCCEECCCCEEcC------CCEECCCCEECCCCEEccccCCCcEEE
Confidence 566666666666666653 4566777777777666 55555554
No 164
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.54 E-value=2e-07 Score=83.79 Aligned_cols=32 Identities=28% Similarity=0.447 Sum_probs=18.2
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEccCCCc
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIANSEGI 411 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~ 411 (442)
+.||++|.|+ +|.|.++++||++++++....+
T Consensus 119 v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV 151 (219)
T 4e8l_A 119 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVV 151 (219)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEECCCeEECCCCEEcCCCEECCCCEECCCCEE
Confidence 5666666665 5555555555555555544433
No 165
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.51 E-value=5.4e-08 Score=87.08 Aligned_cols=42 Identities=24% Similarity=0.380 Sum_probs=27.4
Q ss_pred eeeEeCCCcEECCCeEEccCCCcccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 389 KECIIDKNARIGKNVIIANSEGIQEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 389 ~~~~ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
++++||++|.||.++++.. ..+||+++.||+|++| |.+++++
T Consensus 112 ~~v~Ig~~v~IG~~a~I~~------gv~Ig~~~~Igags~V~~~v~~~~i~ 156 (209)
T 1mr7_A 112 GDTIIGNDVWIGKDVVIMP------GVKIGDGAIVAANSVVVKDIAPYMLA 156 (209)
T ss_dssp CCEEECSSCEECTTCEECT------TCEECTTCEECTTCEECSCBCTTEEE
T ss_pred CCcEECCCCEEcCCCEEcC------CCEECCCCEEcCCCEEcCCCCCCeEE
Confidence 3577777777777777754 4567777777777666 5555444
No 166
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.48 E-value=6.7e-06 Score=81.37 Aligned_cols=351 Identities=10% Similarity=0.066 Sum_probs=181.2
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceee-cCccceehhhhhhhhhc----CC-cEEEEEeccCh-hhHHHHHHhhccC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPI-GGAYRLIDVPMSNCINS----GI-NKVYILTQYNS-ASLNRHLARAYNY 79 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi-~g~~pli~~~l~~l~~~----gi-~~i~iv~~~~~-~~i~~~~~~~~~~ 79 (442)
+++.+|+||||.||||+ ...||.++|+ .++ ++++..++++... +. -..+|.+.... +...+++++.-.|
T Consensus 75 ~kvavvlLaGGlGTRLG---~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~F 150 (484)
T 3gue_A 75 RQAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTL 150 (484)
T ss_dssp TTEEEEEEECCCCGGGT---CSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHH
T ss_pred hhcEEEEEcCCcccccC---CCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCccc
Confidence 47899999999999997 7889999999 556 9999999887763 33 36677777554 5777777653222
Q ss_pred CC---Ccc-cCCceEEEeccccc------CCcCCCccccChHHHHHHhh--hhhcCCCCCccCeEEEEcCCeeeecCHHH
Q 013483 80 GS---GVT-FGDGCVEVLAATQT------PGEAGKRWFQGTADAVRQFH--WLFEDPRNKVIEDVLILSGDHLYRMDYMD 147 (442)
Q Consensus 80 ~~---~~~-~~~~~v~i~~~~~~------~~~~~~~~~~G~~~al~~~~--~~l~~~~~~~~~~~lv~~gD~i~~~~l~~ 147 (442)
+- ... |....+..+..+.. ....-...|.|.++...... ..++++...+.+++.+.+.|.+...--..
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 21 111 11111211111100 00011122456655443322 23333322345799999999955533346
Q ss_pred HHHHHHHcCCcEEEEEeecCCCcCCcccEEEEc---------CCCceEEEEeCCCccccccccccccccccccccccccc
Q 013483 148 FVQNHRQSGADITISCLPMDDSRASDFGLMKIN---------NEGRVLSFSEKPKGKDLKAMAVDTTVLGLSKQEAEEKP 218 (442)
Q Consensus 148 ~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~d---------~~~~v~~i~ek~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (442)
++..+..+++++.+-+.+...++ ..-|.++.. .+|+. .+.|...-+....... .... ..
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~d-ekgG~l~~~~~~~~~~~~~dG~~-~vvEyseip~e~~~~f---------~~~~-g~ 298 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTESD-KKGGHLAYKDVIDETTGQTRRRF-VLRESAQCPKEDEDSF---------QNIA-KH 298 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTTC-CSSEEEEEEC--------CCCEE-EEEEGGGSCGGGHHHH---------TCTT-TS
T ss_pred HHHHHHhcCCCEEEEEEECCCCC-CceeEEEEEccccccccCCCCCE-EEEEeccCCHHHHhhh---------cCCC-Cc
Confidence 78888888999998887765432 334544432 24543 3444333222100000 0000 11
Q ss_pred ceeeeeEEEEeHHHHHHHHhhhC--CCCc-----------------cc-ccchhhhccc-ccceEEEEec-ceeeecCCh
Q 013483 219 YIASMGVYLFKKEILLNLLRWRF--PTAN-----------------DF-GSEIIPASAN-EQFLKAYLFN-DYWEDIGTI 276 (442)
Q Consensus 219 ~l~~~Giy~~~~~~l~~~l~~~~--~~~~-----------------~~-~~~~l~~~i~-~~~i~~~~~~-g~~~di~t~ 276 (442)
.+.+++-..+.-..+.++++... .... -+ .+.++-+++. -.+..++.++ ..|.-+.+.
T Consensus 299 ~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R~rF~PvKn~ 378 (484)
T 3gue_A 299 CFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPRERFAPVKTC 378 (484)
T ss_dssp CEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCGGGCCCCSSH
T ss_pred eEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEEChhhccccccc
Confidence 23478888888888877776531 0000 00 0112222221 0234444433 567788899
Q ss_pred HHHHHHhhhhhcCCCCcccc-CCCC-cccccCccCCCceecCCcee--eeEEcCCC--EEeceEEeeeEEcCCcEECCCC
Q 013483 277 RSFFEANLALTAHPPMFSFY-DATK-PIYTSRRNLPPSKIDDSKIV--DSIISHGS--FITSSFIEHSVVGIRSRINANV 350 (442)
Q Consensus 277 ~~~~~an~~~l~~~~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~i~--~~~i~~~~--~i~~~~i~~~~ig~~~~i~~~~ 350 (442)
.|++-+..++........+. .+.. ...+.+..++.. ...|. ...+..+. .++ ..+-+|-.++..|.++
T Consensus 379 sdLl~~~Sdly~l~~~~~l~~~~~~~~~~P~v~L~~~~---~~~v~~f~~rf~~giPsl~~---~~~L~V~Gdv~fg~~v 452 (484)
T 3gue_A 379 SDLLALRSDAYQVTEDQRLVLCEERNGKPPAIDLDGEH---YKMIDGFEKLVKGGVPSLRQ---CTSLTVRGLVEFGADV 452 (484)
T ss_dssp HHHHHHHSTTEEECTTSCEEECGGGTTCCCEEEECTTT---SSSHHHHHHHHTTCCCBCTT---EEEEEEESSEEECTTC
T ss_pred hHHHHHhhhceeccCCceEEeccccCCCCCeEEECchh---cCcHHHHHHhcCCCCCChhh---CCEEEEecceEECCCc
Confidence 99888877665433221111 1100 001111121110 01111 11122211 111 1244666688888888
Q ss_pred EEeceEEECCccccchhhhhhhhcCCCcceEeCCCcEeeeeEe
Q 013483 351 HLKDTMMLGADFYETDAEVASLLAEGRVPVGIGENTKIKECII 393 (442)
Q Consensus 351 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~i 393 (442)
++...+++.+. ++ .+..|-++++++|.+|
T Consensus 453 ~l~G~v~i~~~-------------~g-~~~~ip~g~~l~~~~~ 481 (484)
T 3gue_A 453 SVRGNVVIKNL-------------KE-EPLIIGSGRVLDNEVV 481 (484)
T ss_dssp EEEEEEEEEEC-------------SS-SCEEECTTCEEESCEE
T ss_pred EEEEEEEEEcC-------------CC-CeeecCCCCEecceec
Confidence 88888877542 11 2378888888887665
No 167
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.34 E-value=5.3e-07 Score=80.59 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=20.9
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEccCCCcc
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIANSEGIQ 412 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~~ 412 (442)
+.||++|.|+ +|.|.++++||++++++....+.
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~ 147 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVV 147 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEc
Confidence 6677777776 56666666666666666544443
No 168
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.34 E-value=6.2e-07 Score=80.23 Aligned_cols=92 Identities=16% Similarity=0.173 Sum_probs=46.2
Q ss_pred eeeEEcCCcEECCCCEEeceEEECC--ccccchh-hhhhhhcCCCcceEeCCCcEee-eeEeCCCcEECCCeEEccCCCc
Q 013483 336 EHSVVGIRSRINANVHLKDTMMLGA--DFYETDA-EVASLLAEGRVPVGIGENTKIK-ECIIDKNARIGKNVIIANSEGI 411 (442)
Q Consensus 336 ~~~~ig~~~~i~~~~~i~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~i~~~~~i~-~~~ig~~~~ig~~~~~~~~~~~ 411 (442)
..++||++|.|+++++|.. .|+ +....-+ ......++....+.+++++.+. .++||++|.||.++++..
T Consensus 55 ~~i~IG~~~~Ig~~v~i~~---~g~~~h~~~~~s~~p~~~~~~~~~~~~i~~~~~~~~~v~IG~~v~IG~~a~I~~---- 127 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAFIM---AGNQGHRAEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHEVWIGTEAMFMP---- 127 (212)
T ss_dssp CCEEECSSCEECTTCEEEC---STTTTCCTTSSCCSCGGGCCSCGGGGGCCCCCCCCCCEEECTTCEECTTCEECT----
T ss_pred cCEEEcCCCEECCCCEEEe---CCCCccccccccccceeeecccccccccccCceecCCeEECCCCEECCCCEEeC----
Confidence 4678888888888888621 011 1000000 0000000000002334455453 467777777777777753
Q ss_pred ccceeeCCCeEEccCcEE---EcCCcEE
Q 013483 412 QEADRSAEGFYIRSGVTV---ILKNSVI 436 (442)
Q Consensus 412 ~~~~~~~~~~~i~~~~~v---i~~~~~v 436 (442)
.++||+++.||+|++| |.+++++
T Consensus 128 --gv~Ig~~~~IgagsvV~~~vp~~~~~ 153 (212)
T 1xat_A 128 --GVRVGHGAIIGSRALVTGDVEPYAIV 153 (212)
T ss_dssp --TCEECTTCEECTTCEECSCBCTTEEE
T ss_pred --CCEECCCCEECCCCEEcccCCCCcEE
Confidence 4566667777777666 5555544
No 169
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.24 E-value=3.8e-06 Score=75.10 Aligned_cols=27 Identities=22% Similarity=0.349 Sum_probs=12.4
Q ss_pred eEeCCCcEee-eeEeCCCcEECCCeEEc
Q 013483 380 VGIGENTKIK-ECIIDKNARIGKNVIIA 406 (442)
Q Consensus 380 ~~i~~~~~i~-~~~ig~~~~ig~~~~~~ 406 (442)
|.||.+|.|. ++.||++|.||+++++.
T Consensus 117 v~IG~~a~I~~gv~Ig~~~~IgagsvV~ 144 (212)
T 1xat_A 117 VWIGTEAMFMPGVRVGHGAIIGSRALVT 144 (212)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CEECCCCEEeCCCEECCCCEECCCCEEc
Confidence 4444444443 34444444444444443
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.61 E-value=0.00057 Score=69.49 Aligned_cols=224 Identities=16% Similarity=0.146 Sum_probs=121.8
Q ss_pred cceEEEEEeCCCCCCCcccccCCCccceeec---Cccceehhhhhhhhh-cCC-cEEEEEeccC-hhhHHHHHHhhccCC
Q 013483 7 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIG---GAYRLIDVPMSNCIN-SGI-NKVYILTQYN-SASLNRHLARAYNYG 80 (442)
Q Consensus 7 ~~~~aVILAaG~gtRl~plt~~~pK~Llpi~---g~~pli~~~l~~l~~-~gi-~~i~iv~~~~-~~~i~~~~~~~~~~~ 80 (442)
.++.+|+||||.||||+ ...||.++|+. ++ +++++.++++.+ .|. -..+|.+... ++...+++++ |.+.
T Consensus 113 ~kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~ 187 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLE 187 (630)
T ss_dssp GGEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-TTCC
T ss_pred hhceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-hCCC
Confidence 47889999999999998 78999999997 78 999999999886 343 3667777654 4578888876 4222
Q ss_pred CC-cc-cCCceEEEeccccc-----CCcCCCccccChHHHHHHhhh--------------------hhcCCCCCccCeEE
Q 013483 81 SG-VT-FGDGCVEVLAATQT-----PGEAGKRWFQGTADAVRQFHW--------------------LFEDPRNKVIEDVL 133 (442)
Q Consensus 81 ~~-~~-~~~~~v~i~~~~~~-----~~~~~~~~~~G~~~al~~~~~--------------------~l~~~~~~~~~~~l 133 (442)
.. .. |....+..+..... ....-...|.|.++....... .++++...+.+++.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 11 11 11111211110000 000111234566554433221 23332223457899
Q ss_pred EEcCCeee-ecCHHHHHHHHHHcCCcEEEEEeecCCCcCCcccEEEE--cCCCce-E-EEEeCCCccccccccccc-ccc
Q 013483 134 ILSGDHLY-RMDYMDFVQNHRQSGADITISCLPMDDSRASDFGLMKI--NNEGRV-L-SFSEKPKGKDLKAMAVDT-TVL 207 (442)
Q Consensus 134 v~~gD~i~-~~~l~~~l~~~~~~~~~~tl~~~~~~~~~~~~~g~v~~--d~~~~v-~-~i~ek~~~~~~~~~~~~~-~~~ 207 (442)
+.+.|.+. ...--.++..+..+++++.+-+.+... ...-|.+.. ..+|+. . .+.|...-+..-+...+. .-.
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p--~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~ 345 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP--KEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDE 345 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS--SCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC--CcceeeEEEEecCCCceeeeeEEEeccCCHhHhhccCCCccc
Confidence 99999943 333335677788889998887776432 345566554 245655 2 345533322110000000 000
Q ss_pred cccccccccccceeeeeEEEEeHHHHHHHHhh
Q 013483 208 GLSKQEAEEKPYIASMGVYLFKKEILLNLLRW 239 (442)
Q Consensus 208 ~~~~~~~~~~~~l~~~Giy~~~~~~l~~~l~~ 239 (442)
..+ ....+....++..+.|+-+.+.+.+..
T Consensus 346 ~~~--~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 346 VSD--PTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp -------CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred ccc--ccccccccccceeeeEEHHHHHHHHHh
Confidence 000 000122334888999998755455543
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.60 E-value=0.0017 Score=57.78 Aligned_cols=105 Identities=21% Similarity=0.205 Sum_probs=69.1
Q ss_pred cceEEEEEe--CCCCCCCcccccCCCccceeecCccceehhhhhhhhhcCCcEE-EEEeccChhhHHHHHHhhccCCCCc
Q 013483 7 RTVAAVILG--GGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKV-YILTQYNSASLNRHLARAYNYGSGV 83 (442)
Q Consensus 7 ~~~~aVILA--aG~gtRl~plt~~~pK~Llpi~g~~pli~~~l~~l~~~gi~~i-~iv~~~~~~~i~~~~~~~~~~~~~~ 83 (442)
+.|.+||++ +..-|||.| ...+......++ ||++|+++.+..++++.+ ++++++... . .+
T Consensus 2 ~~~~~vip~k~g~~KtRL~~---~l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~~--~-----~~------ 64 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSP---VLSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYGL--E-----EM------ 64 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTT---TSCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTTC--S-----SC------
T ss_pred CceEEEEEeCCCCCccccCc---cCCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHHH--H-----hh------
Confidence 458899999 667777752 112222225568 999999999999999998 888865421 1 01
Q ss_pred ccCCceEEEecccccCCcCCCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCe-eeecC-HHHHHH
Q 013483 84 TFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDH-LYRMD-YMDFVQ 150 (442)
Q Consensus 84 ~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~-i~~~~-l~~~l~ 150 (442)
++ +.++... .|.+.+++.+...+. +.++++.||+ ++..+ +.++++
T Consensus 65 -~~---~~~v~~~-----------~gl~~sl~~a~~~~~-------~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 65 -TE---ARVLLDE-----------KDLNEALNRYLKEAE-------EPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp -CS---SEEEECC-----------SCHHHHHHHHHHHCC-------SCEEEECSCCTTCCHHHHHHHTT
T ss_pred -cC---CEEEECC-----------CCHHHHHHHHHHhcC-------CCEEEEcCCcCCCCHHHHHHHHc
Confidence 11 2232211 278999998876662 6899999999 44443 556554
No 172
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=87.84 E-value=3.5 Score=36.07 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=61.5
Q ss_pred eeecCccceehhhhhhhhhcCC--cEEEEEeccChhhHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCccccChH
Q 013483 34 VPIGGAYRLIDVPMSNCINSGI--NKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTA 111 (442)
Q Consensus 34 lpi~g~~pli~~~l~~l~~~gi--~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~G~~ 111 (442)
+|.-|....|..+|+.+.+... -+|+||-+...+.-.+.+.+...-.+ .+.++.. +. .|.+
T Consensus 11 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~-------~i~~i~~-~n---------~G~~ 73 (240)
T 3bcv_A 11 VPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYP-------NIKVIHK-KN---------AGLG 73 (240)
T ss_dssp EEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCS-------SEEEEEC-CC---------CCHH
T ss_pred EecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCC-------CEEEEEC-CC---------CChH
Confidence 3444443566667777765433 26766655444332233322110001 1444431 11 5888
Q ss_pred HHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcCCcEE
Q 013483 112 DAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADIT 160 (442)
Q Consensus 112 ~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~~~~t 160 (442)
.+...+.+... .+.++++.+|.++..+ +..+++...+.+.++.
T Consensus 74 ~a~N~g~~~a~------g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v 117 (240)
T 3bcv_A 74 MACNSGLDVAT------GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAV 117 (240)
T ss_dssp HHHHHHHHHCC------SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcC------CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEE
Confidence 89988887776 4899999999988777 6788887776566654
No 173
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=86.11 E-value=10 Score=33.40 Aligned_cols=108 Identities=11% Similarity=0.090 Sum_probs=64.1
Q ss_pred ceeecCccceehhhhhhhhhcCC--cEEEEEeccChhhHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCccccCh
Q 013483 33 AVPIGGAYRLIDVPMSNCINSGI--NKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGT 110 (442)
Q Consensus 33 Llpi~g~~pli~~~l~~l~~~gi--~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~G~ 110 (442)
.+|.-|+...|..+|+.+.+... -+|+||-+...+.-.+.+.+... . ..+.++........ ......|.
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~---~-----~~i~~i~~~~~~~~-~~~~n~G~ 76 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN---D-----NRVRFYQSDISGVK-ERTEKTRY 76 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG---S-----TTEEEEECCCCSHH-HHHSSCHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh---c-----CCEEEEeccccccc-ccccccCH
Confidence 35555654677788888876543 36777766555555555543211 1 11444433300000 00001478
Q ss_pred HHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHc
Q 013483 111 ADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (442)
Q Consensus 111 ~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~ 155 (442)
+.+...+..... .+.++++.+|.++..+ +..+++.+.+.
T Consensus 77 ~~a~N~gi~~a~------g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 77 AALINQAIEMAE------GEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHHHHHHHHCC------CSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcC------CCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 888888887765 4899999999988777 67777777665
No 174
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=80.85 E-value=3.7 Score=36.76 Aligned_cols=88 Identities=6% Similarity=-0.035 Sum_probs=55.5
Q ss_pred ceehhhhhhhhhcCCcEEEEEeccChhhHH--HHHHhhccCCCCcccCCceEEEecccccCCcCCCccccChHHHHHHhh
Q 013483 41 RLIDVPMSNCINSGINKVYILTQYNSASLN--RHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFH 118 (442)
Q Consensus 41 pli~~~l~~l~~~gi~~i~iv~~~~~~~i~--~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~G~~~al~~~~ 118 (442)
+|+.++++.+.+.+...++++++.....+. .... +.+ +.+. .|.. .|.+.++..+.
T Consensus 38 ~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~-----~~~-------~~~~--~q~~--------~gLg~rl~~a~ 95 (242)
T 3cgx_A 38 HFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWL-----GPQ-------HMFA--AQQG--------LDLGERMKHAM 95 (242)
T ss_dssp HHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHH-----CTT-------SEEE--ECCS--------SSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhc-----cCC-------cEEe--cCCC--------CCHHHHHHHHH
Confidence 899999999999988777777765544432 2111 111 1111 1221 47899999888
Q ss_pred hhhcCCCCCccCeEEEEcCCe--eeecCHHHHHHHHH
Q 013483 119 WLFEDPRNKVIEDVLILSGDH--LYRMDYMDFVQNHR 153 (442)
Q Consensus 119 ~~l~~~~~~~~~~~lv~~gD~--i~~~~l~~~l~~~~ 153 (442)
..+-. ...+.++++.+|+ +....+.++++.+.
T Consensus 96 ~~~~~---~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 96 QKAFD---DGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp HHHHH---TTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred HHHHh---CCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 76611 0136899999999 44455777776544
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=74.45 E-value=30 Score=33.84 Aligned_cols=107 Identities=10% Similarity=0.056 Sum_probs=66.8
Q ss_pred cceeecCcc-ceehhhhhhhhhcCC----cEEEEEeccChh-hHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCc
Q 013483 32 PAVPIGGAY-RLIDVPMSNCINSGI----NKVYILTQYNSA-SLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKR 105 (442)
Q Consensus 32 ~Llpi~g~~-pli~~~l~~l~~~gi----~~i~iv~~~~~~-~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 105 (442)
-.+|.-|.. ..|..+|+.+.+.-. .+|+||-....+ ...+.+.+... +++. .+.++...+.
T Consensus 33 VIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~-----~~~~-~v~vi~~~~n------- 99 (472)
T 1xhb_A 33 VVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK-----KLKV-PVHVIRMEQR------- 99 (472)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH-----SSSS-CEEEEECSSC-------
T ss_pred EEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH-----HCCC-cEEEEECCCC-------
Confidence 356777874 578888888877532 277777654443 23333332110 0110 1555543332
Q ss_pred cccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcCCcE
Q 013483 106 WFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGADI 159 (442)
Q Consensus 106 ~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~~~~ 159 (442)
.|-+.|...+..... .+.++++.+|..+..+ +.++++.+.+....+
T Consensus 100 --~G~~~a~N~g~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 100 --SGLIRARLKGAAVSR------GQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp --CCHHHHHHHHHHHCC------SSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred --CChHHHHHHHHHhcc------CCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 488888888887765 4899999999987766 788888877655443
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=68.65 E-value=35 Score=34.46 Aligned_cols=103 Identities=9% Similarity=0.128 Sum_probs=64.2
Q ss_pred ceeecCcc-ceehhhhhhhhhcCC-c---EEEEEeccChh-hHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCcc
Q 013483 33 AVPIGGAY-RLIDVPMSNCINSGI-N---KVYILTQYNSA-SLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRW 106 (442)
Q Consensus 33 Llpi~g~~-pli~~~l~~l~~~gi-~---~i~iv~~~~~~-~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 106 (442)
.+|.-|.. ..|..+|+.+.+... . +|+||-....+ .+.+.+.+.. .. + ..+.++.....
T Consensus 117 IIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~--~~---~--~~v~vi~~~~n-------- 181 (570)
T 2d7i_A 117 IIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM--AL---F--PSVRILRTKKR-------- 181 (570)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH--TT---S--TTEEEEECSSC--------
T ss_pred EEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH--Hh---C--CeEEEEECCCC--------
Confidence 46677773 477788888766433 2 77777654433 2233443321 00 1 11555543332
Q ss_pred ccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcCC
Q 013483 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGA 157 (442)
Q Consensus 107 ~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~~ 157 (442)
.|-+.|...+..... .+.++++.+|..+..+ |..+++...+...
T Consensus 182 -~G~~~A~N~G~~~A~------gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 182 -EGLIRTRMLGASVAT------GDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp -CCHHHHHHHHHHHCC------SSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred -CCHHHHHHHHHHhcC------CCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 588899888887765 4899999999987766 7888887766543
No 177
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=66.56 E-value=30 Score=34.16 Aligned_cols=100 Identities=8% Similarity=0.085 Sum_probs=63.4
Q ss_pred ceeecCccc-eehhhhhhhhhcCC-c---EEEEEeccChh-hHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCcc
Q 013483 33 AVPIGGAYR-LIDVPMSNCINSGI-N---KVYILTQYNSA-SLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRW 106 (442)
Q Consensus 33 Llpi~g~~p-li~~~l~~l~~~gi-~---~i~iv~~~~~~-~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 106 (442)
.+|.-|... .|...|+.+.+.-. . +|+||-....+ .+.+.+.+ + . .+.++.....
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~-~--------~--~v~vi~~~~n-------- 131 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK-I--------E--KVRVLRNDRR-------- 131 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG-B--------T--TEEEEECSSC--------
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc-C--------C--CEEEEECCCC--------
Confidence 467777633 78888888766433 2 77777654433 33322211 1 1 1455543332
Q ss_pred ccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcCCc
Q 013483 107 FQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (442)
Q Consensus 107 ~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~~~ 158 (442)
.|.+.|...+..... .+.++++.+|.....+ |..+++...+....
T Consensus 132 -~G~~~A~N~G~~~A~------gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 132 -EGLMRSRVRGADAAQ------AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp -CHHHHHHHHHHHHCC------SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred -cCHHHHHHHHHHhcC------CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 588888888887776 4889999999977766 78888887766554
No 178
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=63.42 E-value=48 Score=33.65 Aligned_cols=105 Identities=8% Similarity=-0.032 Sum_probs=66.0
Q ss_pred cceeecCccceehhhhhhhhhcC---CcEEEEEeccChhhHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCcccc
Q 013483 32 PAVPIGGAYRLIDVPMSNCINSG---INKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQ 108 (442)
Q Consensus 32 ~Llpi~g~~pli~~~l~~l~~~g---i~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 108 (442)
-++|.-|....|..+|+.+.+.. .-+|+||-+...+...+.+.+. ... . .+.++..... ..
T Consensus 97 viIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~---~~~--~---~i~~i~~~~~--------~~ 160 (625)
T 2z86_A 97 IVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREF---ESL--L---NIKYVRQKDY--------GY 160 (625)
T ss_dssp EEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTT---TTT--S---CEEEEEECCC--------SC
T ss_pred EEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHh---hhc--C---CeEEEEeCCC--------Cc
Confidence 35677776467888888887753 3577777665555555555432 111 1 1333332211 13
Q ss_pred ChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcCCc
Q 013483 109 GTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (442)
Q Consensus 109 G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~~~ 158 (442)
|.+.++..+..... .+.++++.+|.....+ +..+++.+.+....
T Consensus 161 g~~~a~N~g~~~a~------g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 161 QLCAVRNLGLRAAK------YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp CHHHHHHHHHHHCC------SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred chhHHHHHHHHhCC------cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 57788887777665 4899999999988777 67777777665543
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=56.09 E-value=70 Score=32.39 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=62.9
Q ss_pred ceeecCccceehhhhhhhhhcCC--cEEEEEeccChhhHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCccccCh
Q 013483 33 AVPIGGAYRLIDVPMSNCINSGI--NKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGT 110 (442)
Q Consensus 33 Llpi~g~~pli~~~l~~l~~~gi--~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~G~ 110 (442)
++|.-|....|..+|+.+.+... -+++||-+...+.-.+.+.+.. .... .+.++. ... .|.
T Consensus 380 ii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~--~~~~-----~i~~~~-~~n---------~G~ 442 (625)
T 2z86_A 380 YIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHY--ANHP-----RVRFIS-QKN---------KGI 442 (625)
T ss_dssp EEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHH--TTCT-----TEEEEE-ECC---------CCH
T ss_pred EEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHH--hhCC-----cEEEEe-CCC---------CCH
Confidence 45666765788888888876433 3677776554443334443321 1100 144443 111 488
Q ss_pred HHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcC
Q 013483 111 ADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSG 156 (442)
Q Consensus 111 ~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~ 156 (442)
+.++..+..... .+.++++.+|.+...+ +..+++.+.+..
T Consensus 443 ~~a~n~g~~~a~------g~~i~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 443 GSASNTAVRLCR------GFYIGQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp HHHHHHHHHHCC------SSEEEECCTTCEECTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcC------CCEEEEECCCcccChhHHHHHHHHHHhCC
Confidence 889888887765 4899999999988777 677777665543
No 180
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=54.33 E-value=68 Score=29.52 Aligned_cols=109 Identities=12% Similarity=0.069 Sum_probs=61.8
Q ss_pred ceeecCccceehhhhhhhhhc--C-CcEEEEEeccChhhHHHHHHhhccCCCCcccCCceEEEecccccCCcCCCccccC
Q 013483 33 AVPIGGAYRLIDVPMSNCINS--G-INKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQG 109 (442)
Q Consensus 33 Llpi~g~~pli~~~l~~l~~~--g-i~~i~iv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~G 109 (442)
.+|.-|....|..+|+.+.+. . ..+|+||-+...+.-.+.+.+. ... +. ..+.++...+. ..|
T Consensus 53 iIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~---~~~--~~-~~~~~~~~~~~--------n~G 118 (329)
T 3ckj_A 53 VLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAA---GAR--VV-SREQALPEVPI--------RPG 118 (329)
T ss_dssp EEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHT---TCE--EE-EHHHHCTTSCC--------CCS
T ss_pred EEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHh---hhh--hc-cceeeeccCCC--------CCC
Confidence 456666546777778777664 2 2577777654444434444331 110 00 00001100111 258
Q ss_pred hHHHHHHhhhhhcCCCCCccCeEEEEcCCee-eecC-HHHHHHHHHHc-CCcEEE
Q 013483 110 TADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMDFVQNHRQS-GADITI 161 (442)
Q Consensus 110 ~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i-~~~~-l~~~l~~~~~~-~~~~tl 161 (442)
-+.++..+..... .+.++++.+|.. ...+ +.++++...+. +.+++.
T Consensus 119 ~~~a~n~g~~~a~------gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~ 167 (329)
T 3ckj_A 119 KGEALWRSLAASR------GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVK 167 (329)
T ss_dssp HHHHHHHHHHHCC------CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEE
T ss_pred HHHHHHHHHHhCC------CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEE
Confidence 8999988887765 489999999998 7766 67777764443 444443
No 181
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=41.77 E-value=1e+02 Score=29.28 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=37.2
Q ss_pred cChHHHHHHhhhhhcCCCCCccCeEEEEcCCee-eecC-HHHHHHHHHHc-CCcEEEEE
Q 013483 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHL-YRMD-YMDFVQNHRQS-GADITISC 163 (442)
Q Consensus 108 ~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i-~~~~-l~~~l~~~~~~-~~~~tl~~ 163 (442)
.|-+.|+..+..... .+.++++.+|.. ...+ +.++++...+. +.+++...
T Consensus 165 ~G~g~A~n~G~~~A~------gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~ 217 (387)
T 3f1y_A 165 HGKGDAMWRALSVTR------GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAA 217 (387)
T ss_dssp CSHHHHHHHHTTTCC------SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEE
T ss_pred CCHHHHHHHHHHhcC------CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEe
Confidence 589999998887665 478899999998 6655 67777776654 56665554
No 182
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=37.60 E-value=1.1e+02 Score=31.44 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=60.0
Q ss_pred ceeecCccceehhhhhhhhhc-----CCcEEEEEeccChh-----hHHHHHHhhccCCCCcccCCceEEEecccccCCcC
Q 013483 33 AVPIGGAYRLIDVPMSNCINS-----GINKVYILTQYNSA-----SLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEA 102 (442)
Q Consensus 33 Llpi~g~~pli~~~l~~l~~~-----gi~~i~iv~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~ 102 (442)
.+|.-|+...|...|+.+.+. ...+|+||=+...+ .+.+.+.... + .+.++... .
T Consensus 185 VIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~---~-------~I~vI~~~-N---- 249 (657)
T 4fix_A 185 GIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG---S-------RLSIHDQP-N---- 249 (657)
T ss_dssp ECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG---G-------GEEEEECC-C----
T ss_pred EEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC---C-------CEEEEECC-C----
Confidence 345556546777888887663 23467666554322 3344443221 1 14454322 2
Q ss_pred CCccccChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHcCCc
Q 013483 103 GKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQSGAD 158 (442)
Q Consensus 103 ~~~~~~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~~~~ 158 (442)
.|-+.+.-.++...... ...+.++++..|.++..+ +.++++.+......
T Consensus 250 -----~G~a~a~N~Gl~~A~g~--~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 250 -----LGGSGGYSRVMYEALKN--TDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp -----CHHHHHHHHHHHHHHHH--CCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred -----CCHHHHHHHHHHHHHhc--CCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 46777666666554210 014789999999988766 78888877765443
No 183
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=25.62 E-value=62 Score=28.87 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=20.0
Q ss_pred CccceehhhhhhhhhcCCcEEEEEec
Q 013483 38 GAYRLIDVPMSNCINSGINKVYILTQ 63 (442)
Q Consensus 38 g~~pli~~~l~~l~~~gi~~i~iv~~ 63 (442)
+. |-+.-+++.|.+.|+++|+|+--
T Consensus 63 ~~-P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 63 AA-PSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CC-CCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CC-CCHHHHHHHHHHCCCCEEEEEec
Confidence 45 88888888888889988877754
No 184
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=21.60 E-value=3.2e+02 Score=28.71 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=33.1
Q ss_pred cChHHHHHHhhhhhcCCCCCccCeEEEEcCCeeeecC-HHHHHHHHHHc
Q 013483 108 QGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMD-YMDFVQNHRQS 155 (442)
Q Consensus 108 ~G~~~al~~~~~~l~~~~~~~~~~~lv~~gD~i~~~~-l~~~l~~~~~~ 155 (442)
.|-++++..+.+..+ .+.++++.+|.....+ +.+++....+.
T Consensus 224 ~GKa~alN~gl~~a~------gd~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 224 HAKAGNMSAALERLK------GELVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp SHHHHHHHHHHHHCC------CSEEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred CcchHHHHHHHHhcC------CCEEEEECCCCCcChHHHHHHHHHHhcC
Confidence 477888888887776 4899999999988877 67888776544
Done!