BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013488
(442 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 138/190 (72%), Gaps = 12/190 (6%)
Query: 225 GRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQT 284
GRSV+E+D +PLWG S+ G R EMEDA A P+FLK+PI+ML+GD +G+S + T
Sbjct: 7 GRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLT 64
Query: 285 AHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFA 344
HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ LS + Q QW K+FTSCF
Sbjct: 65 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFL 124
Query: 345 RVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394
VD E+ GK + E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGK
Sbjct: 125 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 184
Query: 395 ESMALSVDHK 404
E+M LSVDHK
Sbjct: 185 EAMPLSVDHK 194
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 139/198 (70%), Gaps = 12/198 (6%)
Query: 217 ENGVRATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGL 276
EN GRSV+E+D +PLWG S+ G R EMEDA A P+FLK+PI+ML+GD +G+
Sbjct: 2 ENSNHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGM 59
Query: 277 SKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWK 336
S + T HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ L + Q QW
Sbjct: 60 SPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWD 119
Query: 337 KIFTSCFARVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDS 386
K+FTSCF VD E+ GK + E VA ETVGSTAVVA++C+SHI+V+NCGDS
Sbjct: 120 KVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDS 179
Query: 387 RAVLCRGKESMALSVDHK 404
RAVL RGKE+M LSVDHK
Sbjct: 180 RAVLFRGKEAMPLSVDHK 197
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 138/193 (71%), Gaps = 12/193 (6%)
Query: 222 ATVGRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFS 281
+GRSV+E+D +PLWG S+ G R EMEDA A P+FLK+PI+ML+GD +G+S +
Sbjct: 1 GAMGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLT 58
Query: 282 QQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTS 341
T HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ L + Q QW K+FTS
Sbjct: 59 HLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTS 118
Query: 342 CFARVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLC 391
CF VD E+ GK + E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL
Sbjct: 119 CFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 178
Query: 392 RGKESMALSVDHK 404
RGKE+M LSVDHK
Sbjct: 179 RGKEAMPLSVDHK 191
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 137/190 (72%), Gaps = 12/190 (6%)
Query: 225 GRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQT 284
GRSV+E+D +PLWG S+ G R EMEDA A P+FLK+PI+ML+GD +G+S + T
Sbjct: 8 GRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLT 65
Query: 285 AHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFA 344
HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ L + Q QW K+FTSCF
Sbjct: 66 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 125
Query: 345 RVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394
VD E+ GK + E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGK
Sbjct: 126 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 185
Query: 395 ESMALSVDHK 404
E+M LSVDHK
Sbjct: 186 EAMPLSVDHK 195
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 137/190 (72%), Gaps = 12/190 (6%)
Query: 225 GRSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQT 284
GRSV+E+D +PLWG S+ G R EMEDA A P+FLK+PI+ML+GD +G+S + T
Sbjct: 17 GRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLT 74
Query: 285 AHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFA 344
HFFGVYDGHGG +VA+YCRDR+H A AEEIE +K+ L + Q QW K+FTSCF
Sbjct: 75 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 134
Query: 345 RVDAEVGGKTNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394
VD E+ GK + E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGK
Sbjct: 135 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 194
Query: 395 ESMALSVDHK 404
E+M LSVDHK
Sbjct: 195 EAMPLSVDHK 204
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 129/181 (71%), Gaps = 12/181 (6%)
Query: 234 VPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDG 293
+PLWG S+ G R EMEDA A P+FLK+PI+ML+GD +G+S + T HFFGVYDG
Sbjct: 2 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYDG 59
Query: 294 HGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGK 353
HGG +VA+YCRDR+H A AEEIE +K+ L + Q QW K+FTSCF VD E+ GK
Sbjct: 60 HGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGK 119
Query: 354 TNQ----------EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDH 403
+ E VA ETVGSTAVVA++C+SHI+V+NCGDSRAVL RGKE+M LSVDH
Sbjct: 120 IGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDH 179
Query: 404 K 404
K
Sbjct: 180 K 180
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 126/178 (70%), Gaps = 16/178 (8%)
Query: 227 SVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAH 286
S+FE VPL+GFTS+CGRRPEMEDAV+T+P FL+ ++ D FD Q AH
Sbjct: 1 SLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSML-DGRFD------PQSAAH 53
Query: 287 FFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARV 346
FFGVYDGHGG QVANYCR+R+H A AEEI K LSDG + E+WKK + F RV
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGD---TWLEKWKKALFNSFLRV 110
Query: 347 DAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHK 404
D+E+ E VAPETVGST+VVA++ SHI VANCGDSRAVLCRGK ++ LSVDHK
Sbjct: 111 DSEI------ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHK 162
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 126/179 (70%), Gaps = 16/179 (8%)
Query: 226 RSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTA 285
RS+FE VPL+GFTS+CGRRPEMEDAV+T+P FL+ ++ D FD Q A
Sbjct: 3 RSLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSML-DGRFD------PQSAA 55
Query: 286 HFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFAR 345
HFFGVYDGHGG QVANYCR+R+H A AEEI K L DG + E+WKK + F R
Sbjct: 56 HFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGD---TWLEKWKKALFNSFLR 112
Query: 346 VDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHK 404
VD+E+ E VAPETVGST+VVA++ SHI VANCGDSRAVLCRGK ++ LSVDHK
Sbjct: 113 VDSEI------ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHK 165
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 126/179 (70%), Gaps = 10/179 (5%)
Query: 226 RSVFEVDYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTA 285
RS+FE VPL+G TS+CGRRPEMED+V+T+P FL++ L+ +V +G + S A
Sbjct: 3 RSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLS---A 59
Query: 286 HFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFAR 345
HFFGVYDGHGG QVANYCR+R+H A EEI K DG + QE+WKK + F R
Sbjct: 60 HFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGD---TWQEKWKKALFNSFMR 116
Query: 346 VDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHK 404
VD+E+ + APETVGST+VVA++ +HI VANCGDSRAVLCRGK +ALSVDHK
Sbjct: 117 VDSEIETVAH----APETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHK 171
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 121/171 (70%), Gaps = 16/171 (9%)
Query: 234 VPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDG 293
VPL+GFTS+CGRRPEMEDAV+T+P FL+ ++ D FD Q AHFFGVYDG
Sbjct: 23 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSML-DGRFD------PQSAAHFFGVYDG 75
Query: 294 HGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGK 353
HGG QVANYCR+R+H A AEEI K L DG + E+WKK + F RVD+E+
Sbjct: 76 HGGSQVANYCRERMHLALAEEIAKEKPMLCDGD---TWLEKWKKALFNSFLRVDSEI--- 129
Query: 354 TNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHK 404
E VAPETVGST+VVA++ SHI VANCGDSRAVLCRGK ++ LSVDHK
Sbjct: 130 ---ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHK 177
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGG 296
+G +S+ G R EMEDA V + +P GL ++ FF VYDGH G
Sbjct: 24 YGLSSMQGWRVEMEDAHTAV---IGLP----------SGL------ESWSFFAVYDGHAG 64
Query: 297 LQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQ 356
QVA YC + + + GS E K + F +D + + +
Sbjct: 65 SQVAKYCCEHLLDHITNNQDF------KGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEK 118
Query: 357 EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKVRN 407
+ A + GSTAV +I H NCGDSR +LCR ++ + DHK N
Sbjct: 119 KHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSN 168
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGG 296
+G +S+ G R EMEDA V + +P GL ++ FF VYDGH G
Sbjct: 24 YGLSSMQGWRVEMEDAHTAV---IGLP----------SGL------ESWSFFAVYDGHAG 64
Query: 297 LQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQ 356
QVA YC + + + GS E K + F +D + + +
Sbjct: 65 SQVAKYCCEHLLDHITNNQDF------KGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEK 118
Query: 357 EPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKVRN 407
+ A + GSTAV +I H NCGDSR +LCR ++ + DHK N
Sbjct: 119 KHGADRS-GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSN 168
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 33/148 (22%)
Query: 279 RFSQQTAH-----------FFGVYDGHGGLQVANYCRDRVHTAFAEEIEL---------V 318
R SQ+ AH FF VYDGHGG +VA YC + T F + +E +
Sbjct: 34 RISQEDAHNCILNFDDQCSFFAVYDGHGGAEVAQYCSLHLPT-FLKTVEAYGRKEFEKAL 92
Query: 319 KECLS--DGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICAS 376
KE D +++ + K+ + A DAE G + G TAVVA++
Sbjct: 93 KEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDS----------GCTAVVALLHGK 142
Query: 377 HIIVANCGDSRAVLCRGKESMALSVDHK 404
+ VAN GDSR V+CR +++ +S DHK
Sbjct: 143 DLYVANAGDSRCVVCRNGKALEMSFDHK 170
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGG 296
+G +S+ G R EMEDA V + IP + + FF VYDGH G
Sbjct: 26 YGLSSMQGWRVEMEDAHTAV---VGIPHGL----------------EDWSFFAVYDGHAG 66
Query: 297 LQVANYCRDRVHTAFAEEI---ELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGK 353
+VANYC T E I E + GS + E K + F ++D +
Sbjct: 67 SRVANYCS----THLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNF 122
Query: 354 TNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHK 404
++ + GSTAV +I HI NCGDSRAVL R + + DHK
Sbjct: 123 SDLRN-GMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHK 172
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 280 FSQQTAH--FFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKK 337
F+Q T +F VYDGHGG A++C HT +++C+ D + ++ +
Sbjct: 142 FAQLTDEVLYFAVYDGHGGPAAADFC----HTH-------MEKCIMD---LLPKEKNLET 187
Query: 338 IFTSCFARVDAEVGGKTNQEPVAPE-TVGSTAVVAIICAS-HIIVANCGDSRAVLCRGKE 395
+ T F +D A T G+TA VA++ ++VA+ GDSRA+LCR +
Sbjct: 188 LLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGK 247
Query: 396 SMALSVDH 403
M L++DH
Sbjct: 248 PMKLTIDH 255
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 280 FSQQTAH--FFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKK 337
F+Q T +F VYDGHGG A++C HT +++C+ D + ++ +
Sbjct: 28 FAQLTDEVLYFAVYDGHGGPAAADFC----HTH-------MEKCIMD---LLPKEKNLET 73
Query: 338 IFTSCFARVDAEVGGKTNQEPVAPE-TVGSTAVVAIICAS-HIIVANCGDSRAVLCRGKE 395
+ T F +D A T G+TA VA++ ++VA+ GDSRA+LCR +
Sbjct: 74 LLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGK 133
Query: 396 SMALSVDH 403
M L++DH
Sbjct: 134 PMKLTIDH 141
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 37/169 (21%)
Query: 280 FSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIEL--VKECLSDGSVVHSCQEQWKK 337
S + + GH G+ VA + A E+ L + C +D +V ++ +
Sbjct: 45 ISDNNTSLYAILSGHNGVTVA----ENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMS 100
Query: 338 IFTSCFARVDAEVGGKT-----------NQEPVAPE---------------TVGSTAVVA 371
+ F ++ V KT NQ ++ + +VGS+AV+A
Sbjct: 101 VEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLA 160
Query: 372 IICASHIIVANCGDSRAVLCRGKES-----MALSVDHKVRNFQLWFYLF 415
+I SH+ + N G+ RA+LC+ E LSVDH + N + LF
Sbjct: 161 LIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLF 209
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 307 VHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGS 366
+ A AE+ L + L +G H Q++KI ++ E+ G G+
Sbjct: 121 IDDALAEKASLQSQ-LPEGVPQHQLPPQYQKILER-LKTLEREISG------------GA 166
Query: 367 TAVVAIICASHIIVANCGDSRAVLCR----GKESMALSVDHKVRNFQLWFYL 414
AVVA++ + + VAN G +RA+LC+ G + L+VDH N F L
Sbjct: 167 MAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRL 218
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 307 VHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGS 366
+ A AE+ L + L +G H Q++KI ++ E+ G G+
Sbjct: 123 IDDALAEKASLQSQ-LPEGVPQHQLPPQYQKILER-LKTLEREISG------------GA 168
Query: 367 TAVVAIICASHIIVANCGDSRAVLCR----GKESMALSVDHKVRNFQLWFYL 414
AVVA++ + + VAN G +RA+LC+ G + L+VDH N F L
Sbjct: 169 MAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRL 220
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 281 SQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFT 340
S+ +GV++G+ G +V N+ R+ + + ++ V + + +
Sbjct: 60 SENNCFLYGVFNGYDGNRVTNFVAQRLSAELL--LGQLNAEHAEADVRRVLLQAFDVVER 117
Query: 341 SCFARVDAEVGGKTNQEPVAPETV------GSTAVVAIICASHIIVANCGDSRAVLCR-- 392
S +D + K + + +T+ G+ AVVA++ + + VAN G +RA+LC+
Sbjct: 118 SFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST 177
Query: 393 --GKESMALSVDHKVRNFQLWFYL 414
G + L+VDH N F L
Sbjct: 178 VDGLQVTQLNVDHTTENEDELFRL 201
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 365 GSTAVVAIICASHIIVANCGDSRAVLCRGKE-----SMALSVDHKVRN 407
G+TA VA + + VAN GDSRA+L +E ++ LS DH +N
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQN 247
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 365 GSTAVVAIICASHIIVANCGDSRAVLCRGKE-----SMALSVDHKVRN 407
G+TA VA + + VAN GDSRA+L +E ++ LS DH +N
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQN 247
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 364 VGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKVRN 407
+G+T I +II A+ GDSR + R E L+ DH + N
Sbjct: 102 MGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVN 145
>pdb|3KXQ|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
pdb|3KXQ|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
Length = 275
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 2 FTPVVVPFRAGN--------SVCDNPTIST--HSDIKRL--KLMSDTAGLLSNSVAKVSE 49
+P + PF AGN S+ + I+ SD+ RL L+ A LLS + +
Sbjct: 22 MSPNIRPFIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGG 81
Query: 50 KSVARAHENCNYSDLGNEVGSVAVVVPEEDKVGGVSLLDMISENKSNWGSSDDVI 104
+++ +NC++ D G G ++ + +E G ++ SE ++ + SD ++
Sbjct: 82 ENILLGGQNCHFDDYGPYTGDISAFMLKE--AGASHVIIGHSERRTVYQESDAIV 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,007,207
Number of Sequences: 62578
Number of extensions: 459842
Number of successful extensions: 1107
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1054
Number of HSP's gapped (non-prelim): 27
length of query: 442
length of database: 14,973,337
effective HSP length: 102
effective length of query: 340
effective length of database: 8,590,381
effective search space: 2920729540
effective search space used: 2920729540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)