Query 013488
Match_columns 442
No_of_seqs 238 out of 1521
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 04:21:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013488.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013488hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 8.9E-33 1.9E-37 267.7 14.3 171 235-431 22-193 (379)
2 KOG0698 Serine/threonine prote 100.0 2.5E-30 5.3E-35 262.1 19.0 166 232-427 37-210 (330)
3 PLN03145 Protein phosphatase 2 100.0 7.5E-30 1.6E-34 261.7 19.0 167 235-429 65-232 (365)
4 PF00481 PP2C: Protein phospha 100.0 2.8E-29 6.1E-34 244.0 15.7 161 237-428 2-166 (254)
5 KOG0699 Serine/threonine prote 99.9 8.2E-28 1.8E-32 239.9 13.3 69 363-431 329-399 (542)
6 PTZ00224 protein phosphatase 2 99.9 3.8E-27 8.3E-32 242.8 16.8 151 233-430 20-172 (381)
7 COG0631 PTC1 Serine/threonine 99.9 2.3E-24 5E-29 212.1 12.9 155 237-421 10-166 (262)
8 smart00332 PP2Cc Serine/threon 99.9 6.3E-21 1.4E-25 182.5 19.7 159 236-427 7-166 (255)
9 cd00143 PP2Cc Serine/threonine 99.9 6.3E-21 1.4E-25 181.5 18.4 153 237-420 3-156 (254)
10 KOG0700 Protein phosphatase 2C 99.9 1.1E-21 2.5E-26 199.4 12.3 137 283-419 97-262 (390)
11 PRK14559 putative protein seri 99.8 1.6E-20 3.5E-25 204.4 15.1 152 235-408 375-529 (645)
12 KOG1323 Serine/threonine phosp 99.7 1.8E-17 3.8E-22 164.9 12.5 167 238-420 108-300 (493)
13 PF13672 PP2C_2: Protein phosp 99.4 1.1E-11 2.4E-16 116.5 13.6 133 240-407 3-141 (212)
14 KOG0618 Serine/threonine phosp 98.9 2.6E-09 5.7E-14 118.6 8.0 151 235-427 522-683 (1081)
15 smart00331 PP2C_SIG Sigma fact 98.8 3E-08 6.5E-13 91.9 12.0 97 284-404 29-128 (193)
16 KOG1379 Serine/threonine prote 98.6 1.8E-07 3.8E-12 93.8 10.1 98 284-401 102-206 (330)
17 TIGR02865 spore_II_E stage II 97.1 0.005 1.1E-07 69.8 13.5 98 284-405 579-678 (764)
18 PF07228 SpoIIE: Stage II spor 96.6 0.051 1.1E-06 49.9 13.1 99 284-405 3-105 (193)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-33 Score=267.70 Aligned_cols=171 Identities=29% Similarity=0.362 Sum_probs=146.7
Q ss_pred ceEEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHH
Q 013488 235 PLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEE 314 (442)
Q Consensus 235 ~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~ 314 (442)
.+||.+||||||.+|||+|.+...+. ++ -.+|.||||||||.|+++|++|++||.++|...
T Consensus 22 lryg~SSMQGWR~eMEDah~A~~~l~-------------~~------l~dWSfFAVfDGHAGs~va~~c~~hLlehi~ss 82 (379)
T KOG0697|consen 22 LRYGVSSMQGWRVEMEDAHTAVAGLP-------------SP------LEDWSFFAVFDGHAGSQVANHCAEHLLEHIISS 82 (379)
T ss_pred eeeeeccccchhhhhhhhhhhhhcCC-------------CC------ccCceEEEEEcCccchHHHHHHHHHHHHHhhhh
Confidence 58999999999999999998765432 11 148999999999999999999999999999876
Q ss_pred HHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEeCC
Q 013488 315 IELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394 (442)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g 394 (442)
..+... ....+.+.+++.++..|+++|+.++...... ...+++||||+++++.+.++|++|||||||||||+|
T Consensus 83 e~F~~~------~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~-~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng 155 (379)
T KOG0697|consen 83 EEFRGM------TKNGSVENVEKGIRTGFLSIDEIMRTLSDIS-KGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG 155 (379)
T ss_pred HHHhhh------ccCCcHHHHHhhHhhcceeHHHHHhhhhhhh-cccccCCceEEEEEecCceEEEEecCcchhheecCC
Confidence 544321 2233567899999999999999988765433 345679999999999999999999999999999999
Q ss_pred eeeECCCCCCCCChhHHHHH-HhCCeEeeeeeccEehh
Q 013488 395 ESMALSVDHKVRNFQLWFYL-FICLFLQYLLINCKKLI 431 (442)
Q Consensus 395 ~a~~LT~DHkPs~~~Er~RI-~aGG~V~~~rV~g~~~~ 431 (442)
+++.-|.||||.+|+|++|| .+||.|---||||-..+
T Consensus 156 ~~~f~TqDHKP~~p~EkeRIqnAGGSVMIqRvNGsLAV 193 (379)
T KOG0697|consen 156 EVVFSTQDHKPYLPKEKERIQNAGGSVMIQRVNGSLAV 193 (379)
T ss_pred ceEEeccCCCCCChHHHHHHhcCCCeEEEEEecceeee
Confidence 99999999999999999999 89999999999987654
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-30 Score=262.14 Aligned_cols=166 Identities=34% Similarity=0.442 Sum_probs=138.3
Q ss_pred cccceEEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHH
Q 013488 232 DYVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAF 311 (442)
Q Consensus 232 ~~~~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L 311 (442)
.....++.++.+|+|+.|||++.+.+.+...+. ......+||||||||||+.+|+|++++|+..|
T Consensus 37 ~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~---------------~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l 101 (330)
T KOG0698|consen 37 ESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDV---------------GGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNL 101 (330)
T ss_pred ccccceEEEecCCCCCccCcceeeccccccccc---------------CCCCceEEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 344567788999999999999999877642210 01125899999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCcccccHHHHHHHHHHHHH-HHHHHHhcccCCCCCCCCCccceeeeeeeeCC-EEEEEEEccCeEE
Q 013488 312 AEEIELVKECLSDGSVVHSCQEQWKKIFTSCFA-RVDAEVGGKTNQEPVAPETVGSTAVVAIICAS-HIIVANCGDSRAV 389 (442)
Q Consensus 312 ~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~-~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~-~L~VANvGDSRAV 389 (442)
.+++...... ..++++++++|+ ++|.++..+ . .....+||||+++++.++ +|||||+||||||
T Consensus 102 ~~~~~~~~~~-----------~~~~~a~~~~F~~~~D~~~~~~-~---~~~~~~gstav~~vi~~~~~l~vaN~GDSRaV 166 (330)
T KOG0698|consen 102 LEQLAFPKDR-----------QDVKDALRRAFLTKTDSEFLEK-R---EDNRSGGSTAVVALIKKGRKLYVANVGDSRAV 166 (330)
T ss_pred Hhhhhcccch-----------HHHHHHHHHHHHHHHHHHHHhh-c---cCCCCCcceeeeeeEecCCEEEEEEcCCCcEE
Confidence 9987653221 568999999999 699999976 1 224578999999999865 9999999999999
Q ss_pred EEeCC-eeeECCCCCCCCChhHHHHH-HhCCeEeee----eecc
Q 013488 390 LCRGK-ESMALSVDHKVRNFQLWFYL-FICLFLQYL----LINC 427 (442)
Q Consensus 390 L~r~g-~a~~LT~DHkPs~~~Er~RI-~aGG~V~~~----rV~g 427 (442)
||++| ++++||.||+|++++|++|| .+||+|... ||+|
T Consensus 167 l~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~Rv~G 210 (330)
T KOG0698|consen 167 LSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGGVWRVNG 210 (330)
T ss_pred EecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcceEec
Confidence 99765 89999999999999999999 999999854 8888
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=99.97 E-value=7.5e-30 Score=261.72 Aligned_cols=167 Identities=27% Similarity=0.402 Sum_probs=134.9
Q ss_pred ceEEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHH
Q 013488 235 PLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEE 314 (442)
Q Consensus 235 ~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~ 314 (442)
..+|..|.+|.|++|||++++..++.+. . +.. ........||||||||||+.+|+|++++|++.|.+.
T Consensus 65 ~~~~~~s~~G~R~~nED~~~~~~~~~~~--------~---~~~-~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~ 132 (365)
T PLN03145 65 VRSGAWADIGSRSSMEDVYICVDNFMSD--------F---GLK-NSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVED 132 (365)
T ss_pred eEEEEEccccCCCCCCCceEeccccccc--------c---ccc-ccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 3579999999999999999887654210 0 000 001124689999999999999999999999998753
Q ss_pred HHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEeCC
Q 013488 315 IELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGK 394 (442)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g 394 (442)
... ...++++|+++|.++|++|.+..... ....+|||+++++|.++++||||+|||||||+|++
T Consensus 133 ~~~--------------~~~~~~al~~af~~~d~~~~~~~~~~--~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g 196 (365)
T PLN03145 133 EDF--------------PREIEKVVSSAFLQTDTAFAEACSLD--ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG 196 (365)
T ss_pred hcc--------------chhHHHHHHHHHHHHhHHHHhhhccc--cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC
Confidence 211 13467889999999999997654321 22359999999999999999999999999999999
Q ss_pred eeeECCCCCCCCChhHHHHH-HhCCeEeeeeeccEe
Q 013488 395 ESMALSVDHKVRNFQLWFYL-FICLFLQYLLINCKK 429 (442)
Q Consensus 395 ~a~~LT~DHkPs~~~Er~RI-~aGG~V~~~rV~g~~ 429 (442)
++++||+||+|.++.|++|| ..||++..+++++..
T Consensus 197 ~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~g~v~g~l 232 (365)
T PLN03145 197 KAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQL 232 (365)
T ss_pred eEEEecCCCCCCCHHHHHHHHHcCCceecceECCcc
Confidence 99999999999999999999 899999888887754
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.96 E-value=2.8e-29 Score=243.96 Aligned_cols=161 Identities=29% Similarity=0.410 Sum_probs=131.7
Q ss_pred EEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHH
Q 013488 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIE 316 (442)
Q Consensus 237 ~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~ 316 (442)
+|..+++|+|.+|||++++..++... ....+..+|||||||||..+|+|++++|+..|.+...
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~-----------------~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~ 64 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSN-----------------SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLS 64 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCC-----------------TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCcccc-----------------CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcc
Confidence 78999999999999999998766321 1123679999999999999999999999988888765
Q ss_pred HHhhhccCCCcccccHHHHHHHHHHHHHH-HHHHHhcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEeCCe
Q 013488 317 LVKECLSDGSVVHSCQEQWKKIFTSCFAR-VDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE 395 (442)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~i~~aL~~aF~~-~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g~ 395 (442)
.... ..+.++|..+|.+ +|+.+...... . ....+||||++++|.+++||+||+|||||||++++.
T Consensus 65 ~~~~------------~~~~~al~~a~~~~~~~~~~~~~~~-~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~ 130 (254)
T PF00481_consen 65 FNDG------------NDIEEALRQAFLAFTDESLYSDSEN-N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGG 130 (254)
T ss_dssp HHTC------------HHHHHHHHHHHHHHHHHHHHHHHHH-H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTE
T ss_pred cccc------------cchhhcccceeeecccccccccccc-c-ccccccccccccccccceeEEEeeeeeeeeeeeccc
Confidence 5432 2578999999999 99988863211 0 344799999999999999999999999999999998
Q ss_pred ee-ECCCCCCCCChhHHHHH-HhCCeEe-eeeeccE
Q 013488 396 SM-ALSVDHKVRNFQLWFYL-FICLFLQ-YLLINCK 428 (442)
Q Consensus 396 a~-~LT~DHkPs~~~Er~RI-~aGG~V~-~~rV~g~ 428 (442)
.. +||+||+|++++|+.|| ..||.+. ..|++|.
T Consensus 131 ~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~~~rv~g~ 166 (254)
T PF00481_consen 131 IIKQLTRDHKPSNPDERERIRKAGGRVSENGRVNGV 166 (254)
T ss_dssp EEEESS---STTSHHHHHHHHHTT-GEEETEEETTT
T ss_pred cccccccccccchhhccceeeccccccccchhhhhc
Confidence 88 99999999999999999 8999998 6888876
No 5
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=8.2e-28 Score=239.91 Aligned_cols=69 Identities=32% Similarity=0.323 Sum_probs=65.7
Q ss_pred CccceeeeeeeeCCEEEEEEEccCeEEEEeCCeeeECCCCCCCCChhHHHHH-HhCCeEe-eeeeccEehh
Q 013488 363 TVGSTAVVAIICASHIIVANCGDSRAVLCRGKESMALSVDHKVRNFQLWFYL-FICLFLQ-YLLINCKKLI 431 (442)
Q Consensus 363 ~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g~a~~LT~DHkPs~~~Er~RI-~aGG~V~-~~rV~g~~~~ 431 (442)
.+|||||||+|.+++|||||.||||+||+|+|+++-||.||||.++.|..|| .+||.|. .+||||-.=+
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNL 399 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNL 399 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccch
Confidence 7899999999999999999999999999999999999999999999999999 9999998 8999986543
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=99.95 E-value=3.8e-27 Score=242.84 Aligned_cols=151 Identities=25% Similarity=0.228 Sum_probs=124.7
Q ss_pred ccceEEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHH
Q 013488 233 YVPLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFA 312 (442)
Q Consensus 233 ~~~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~ 312 (442)
....+|..+++|+|++|||++++... ....||||||||||..+|+|++++|+..+.
T Consensus 20 ~~~~~g~~s~~G~R~~nED~~~v~~~------------------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~ 75 (381)
T PTZ00224 20 SIFRCASACVNGYRESMEDAHLLYLT------------------------DDWGFFGVFDGHVNDECSQYLARAWPQALE 75 (381)
T ss_pred ccEEEEEEeCCCCCCCCCCeeEeccC------------------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHH
Confidence 34568999999999999999876421 135699999999999999999999997764
Q ss_pred HHHHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeee-CCEEEEEEEccCeEEEE
Q 013488 313 EEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIIC-ASHIIVANCGDSRAVLC 391 (442)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~-~~~L~VANvGDSRAVL~ 391 (442)
+... . ...+.|+++|..+|+++.+... .+|||+++++|. +.++||||+|||||||+
T Consensus 76 ~~~~----~------------~~~~~l~~a~~~~d~~i~~~~~-------~~GsTatv~lI~~~~~l~vaNVGDSRayl~ 132 (381)
T PTZ00224 76 KEPE----P------------MTDERMEELCLEIDEEWMDSGR-------EGGSTGTFCVIMKDVHLQVGNVGDSRVLVC 132 (381)
T ss_pred hccc----c------------ccHHHHHHHHHHHHHHHHhccc-------CCCCeEEEEEEEECCEEEEEEcccceEEEE
Confidence 3210 0 0124588899999999985432 469999999886 57999999999999999
Q ss_pred eCCeeeECCCCCCCCChhHHHHH-HhCCeEeeeeeccEeh
Q 013488 392 RGKESMALSVDHKVRNFQLWFYL-FICLFLQYLLINCKKL 430 (442)
Q Consensus 392 r~g~a~~LT~DHkPs~~~Er~RI-~aGG~V~~~rV~g~~~ 430 (442)
|+|++++||+||+|.++.|+.|| ..||.+..+|++|...
T Consensus 133 r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~Rv~G~l~ 172 (381)
T PTZ00224 133 RDGKLVFATEDHKPNNPGERQRIEACGGRVVSNRVDGDLA 172 (381)
T ss_pred ECCEEEEcccCCCCCCHHHHhHHHHccCEeccccccCcee
Confidence 99999999999999999999999 8999998888877543
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.91 E-value=2.3e-24 Score=212.09 Aligned_cols=155 Identities=23% Similarity=0.191 Sum_probs=124.3
Q ss_pred EEEEeccc-CCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHH
Q 013488 237 WGFTSVCG-RRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEI 315 (442)
Q Consensus 237 ~G~~S~~G-~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l 315 (442)
++..|..| .|.+|||++.+.++.. ... ..||+|||||||++++++|++.+.+.|.+.+
T Consensus 10 ~~~~s~~g~~R~~NeD~~~~~~~~~--------------------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~ 68 (262)
T COG0631 10 VAGLSDVGTVRKHNEDAFLIKPNEN--------------------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARLF 68 (262)
T ss_pred eeeeccCCCccCCCCcceeeccccC--------------------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHH
Confidence 44555555 5999999998865321 112 5799999999999999999999999999987
Q ss_pred HHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEeCCe
Q 013488 316 ELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE 395 (442)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g~ 395 (442)
........ .+.+.+.+.+++..+++++....... .....+|||++++++.++++|+||+|||||||+|+|+
T Consensus 69 ~~~~~~~~--------~~~~~~~l~~~~~~~n~~i~~~~~~~-~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~ 139 (262)
T COG0631 69 DETNFNSL--------NESLEELLKEAILKANEAIAEEGQLN-EDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGE 139 (262)
T ss_pred Hhcccccc--------chhHHHHHHHHHHHHHHHHHHhhhcc-cccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCc
Confidence 65432211 11178999999999999999876422 4567899999999999999999999999999999999
Q ss_pred eeECCCCCCCCChhHHHHH-HhCCeEe
Q 013488 396 SMALSVDHKVRNFQLWFYL-FICLFLQ 421 (442)
Q Consensus 396 a~~LT~DHkPs~~~Er~RI-~aGG~V~ 421 (442)
+++||+||++.++.|+.|+ ..++...
T Consensus 140 ~~~lT~DH~~~~~~~~~~~~~~~~~~~ 166 (262)
T COG0631 140 LKQLTEDHSLVNRLEQRGIITPEEARS 166 (262)
T ss_pred eEEeccCCcHHHHHHHhcCCCHHHHHh
Confidence 9999999999999999996 4444433
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.87 E-value=6.3e-21 Score=182.51 Aligned_cols=159 Identities=34% Similarity=0.475 Sum_probs=128.8
Q ss_pred eEEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHH
Q 013488 236 LWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEI 315 (442)
Q Consensus 236 ~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l 315 (442)
.+|..+.+|+|..|||++.+...+. ....+|+|||||||+.+|+++++.+...+.+..
T Consensus 7 ~~~~~~~~~~r~~neD~~~~~~~~~----------------------~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~ 64 (255)
T smart00332 7 RYGLSSMQGVRKPMEDAHVITPDLS----------------------DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEEL 64 (255)
T ss_pred eEEEecCCCCCCCCcceEEEeccCC----------------------CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhH
Confidence 4577888899999999998754310 257899999999999999999999998887654
Q ss_pred HHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEeCCe
Q 013488 316 ELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKE 395 (442)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g~ 395 (442)
..... ....+.+.|+++|.++++.+....... .....+|||++++++.++++|++|+||||+|++|+++
T Consensus 65 ~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~ 133 (255)
T smart00332 65 IKHKD----------ELEDVEEALRKAFLKTDEEILEELESL-EEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGK 133 (255)
T ss_pred hhccc----------chhHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCc
Confidence 32211 124577889999999999998765432 2335689999999999999999999999999999999
Q ss_pred eeECCCCCCCCChhHHHHH-HhCCeEeeeeecc
Q 013488 396 SMALSVDHKVRNFQLWFYL-FICLFLQYLLINC 427 (442)
Q Consensus 396 a~~LT~DHkPs~~~Er~RI-~aGG~V~~~rV~g 427 (442)
..+||.||++.++.|+.|| ..++.+..++..+
T Consensus 134 ~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (255)
T smart00332 134 AVQLTEDHKPSNEDERARIEAAGGFVINGRVNG 166 (255)
T ss_pred eeEcCCCCCCcCHHHHHHHHHcCCEEECCeECC
Confidence 9999999999999999999 7787765444444
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.87 E-value=6.3e-21 Score=181.54 Aligned_cols=153 Identities=33% Similarity=0.453 Sum_probs=127.5
Q ss_pred EEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHH
Q 013488 237 WGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIE 316 (442)
Q Consensus 237 ~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~ 316 (442)
++..+.+|+|+.|||++.+..... ..+..+|+|+|||||+..++++++.+...|.+.+.
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~---------------------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~ 61 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLN---------------------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELE 61 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCC---------------------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHh
Confidence 578888999999999998753221 01568999999999999999999999999988764
Q ss_pred HHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEeCCee
Q 013488 317 LVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKES 396 (442)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r~g~a 396 (442)
.... .....+...|+++|.++++.+....... .....+|||++++++.+++++++|+||||+|++|+++.
T Consensus 62 ~~~~---------~~~~~~~~~l~~~~~~~~~~l~~~~~~~-~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~ 131 (254)
T cd00143 62 ETLT---------LSEEDIEEALRKAFLRADEEILEEAQDE-PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEA 131 (254)
T ss_pred hccc---------cchHHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCce
Confidence 3211 2246778899999999999998765422 23457899999999999999999999999999999999
Q ss_pred eECCCCCCCCChhHHHHH-HhCCeE
Q 013488 397 MALSVDHKVRNFQLWFYL-FICLFL 420 (442)
Q Consensus 397 ~~LT~DHkPs~~~Er~RI-~aGG~V 420 (442)
+++|.||++.++.|+.|| ..+|+.
T Consensus 132 ~~lt~dh~~~~~~~~~~i~~~~~~~ 156 (254)
T cd00143 132 VQLTKDHKPVNEEERERIEKAGGRV 156 (254)
T ss_pred eEcCCCCCCcChHHHHHHHHcCCcE
Confidence 999999999999999999 777763
No 10
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-21 Score=199.38 Aligned_cols=137 Identities=23% Similarity=0.278 Sum_probs=109.0
Q ss_pred CCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHHHHhhhccC---CCc-----------------ccccHHHHHHHHHHH
Q 013488 283 QTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSD---GSV-----------------VHSCQEQWKKIFTSC 342 (442)
Q Consensus 283 ~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~~~~~~~~~---~~~-----------------~~~~~~~i~~aL~~a 342 (442)
..+.||||||||||.++++|++++|..++..++......... ... .......+.++|.+|
T Consensus 97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A 176 (390)
T KOG0700|consen 97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA 176 (390)
T ss_pred CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence 478999999999999999999999999999777653322100 000 001157789999999
Q ss_pred HHHHHHHHhcccCCC---CCCCCCccceeeeeeeeCCEEEEEEEccCeEEEEe---CC---eeeECCCCCCCCChhHHHH
Q 013488 343 FARVDAEVGGKTNQE---PVAPETVGSTAVVAIICASHIIVANCGDSRAVLCR---GK---ESMALSVDHKVRNFQLWFY 413 (442)
Q Consensus 343 F~~~D~~L~~~~~~~---~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~r---~g---~a~~LT~DHkPs~~~Er~R 413 (442)
|.++|++|.+..... ......+||||++++|++..|||||+|||||||++ ++ .++|||.||+.++++|++|
T Consensus 177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R 256 (390)
T KOG0700|consen 177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR 256 (390)
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence 999999997654211 13345799999999999999999999999999985 22 6899999999999999999
Q ss_pred HHhCCe
Q 013488 414 LFICLF 419 (442)
Q Consensus 414 I~aGG~ 419 (442)
|+.-..
T Consensus 257 ir~eHP 262 (390)
T KOG0700|consen 257 IRSEHP 262 (390)
T ss_pred HHHhCC
Confidence 966554
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.84 E-value=1.6e-20 Score=204.35 Aligned_cols=152 Identities=19% Similarity=0.168 Sum_probs=108.6
Q ss_pred ceEEEEecccC-CCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHH
Q 013488 235 PLWGFTSVCGR-RPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAE 313 (442)
Q Consensus 235 ~~~G~~S~~G~-R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~ 313 (442)
..++..|.+|+ |++|||++.+..++.... .+.+ .......||+|||||||+.+++.|++...+.|.+
T Consensus 375 l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~--------~~~~----~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~ 442 (645)
T PRK14559 375 LEDAGRTDVGRQRHHNEDYFGINTRIQKLE--------NPHG----RIVQARGLYILCDGMGGHAAGEVASALAVETLQQ 442 (645)
T ss_pred EEEEEECCCCCCCcccCCcccccccccccc--------cccc----cccccceEEEEEeCCCCchhHHHHHHHHHHHHHH
Confidence 34688899997 999999987654321100 0000 0001356999999999999888888877777766
Q ss_pred HHHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCC-CCCCCccceeeeeeeeCCEEEEEEEccCeEEEE-
Q 013488 314 EIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEP-VAPETVGSTAVVAIICASHIIVANCGDSRAVLC- 391 (442)
Q Consensus 314 ~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~-~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL~- 391 (442)
.+...... . ...++.|+++|..+|+.|.+...... .....+|||+++++|.++++|++||||||+|++
T Consensus 443 ~~~~~~~~---~-------~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~ 512 (645)
T PRK14559 443 YFQQHWQD---E-------LPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVT 512 (645)
T ss_pred HHHhhhcc---c-------ccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEe
Confidence 54322111 0 01246788899999999976543221 134469999999999999999999999999988
Q ss_pred eCCeeeECCCCCCCCCh
Q 013488 392 RGKESMALSVDHKVRNF 408 (442)
Q Consensus 392 r~g~a~~LT~DHkPs~~ 408 (442)
|+|+.++||+||++..+
T Consensus 513 r~g~l~QLT~DHs~~~~ 529 (645)
T PRK14559 513 RKGGLEQLTVDHEVGQR 529 (645)
T ss_pred cCCeEEEeCCCCCHHHH
Confidence 57899999999998754
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.73 E-value=1.8e-17 Score=164.91 Aligned_cols=167 Identities=25% Similarity=0.235 Sum_probs=124.0
Q ss_pred EEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHHH
Q 013488 238 GFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIEL 317 (442)
Q Consensus 238 G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~~ 317 (442)
|.-|.+-+|.++.|.-+..+.-. +.+ ..+......++++|.+||||.|+.+|-.+++.+++++.+++..
T Consensus 108 gs~t~~~n~n~~~~~~~l~~g~~---------~~~--k~~~~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~ 176 (493)
T KOG1323|consen 108 GSETRKRNSNENDDDPMLTPGGD---------DTV--KSSMFAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCE 176 (493)
T ss_pred CccccCCCCCccccCcCCCCCCC---------cch--hhcccCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHH
Confidence 45555566777777654432210 000 0111223458899999999999999999999999999998875
Q ss_pred HhhhccCC--------------C------------cccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeee
Q 013488 318 VKECLSDG--------------S------------VVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVA 371 (442)
Q Consensus 318 ~~~~~~~~--------------~------------~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvva 371 (442)
+...+..- . -.-..+..+..+|..||+.+|++|..... .....+||||+++
T Consensus 177 vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViGAlEsAFqemDeqiarer~---~~~~~GGCtalvv 253 (493)
T KOG1323|consen 177 VVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIGALESAFQEMDEQIARERQ---VWRLPGGCTALVV 253 (493)
T ss_pred HHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHHHHHHHHHHHHHHHHHHHH---hhcCCCCceEEEe
Confidence 54332110 0 00122567889999999999999987655 5566799999999
Q ss_pred eeeCCEEEEEEEccCeEEEEeCCeeeECCCCCCCCChhHHHHHHhCCeE
Q 013488 372 IICASHIIVANCGDSRAVLCRGKESMALSVDHKVRNFQLWFYLFICLFL 420 (442)
Q Consensus 372 lI~~~~L~VANvGDSRAVL~r~g~a~~LT~DHkPs~~~Er~RI~aGG~V 420 (442)
+..-++||+||.|||||+|.|+++..+||++.+| +.||+||+.-+|.
T Consensus 254 i~llGKlYvaNAGDsRAIlVrndeirplS~efTP--etERqRlQ~Laf~ 300 (493)
T KOG1323|consen 254 IVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP--ETERQRLQELAFR 300 (493)
T ss_pred eeeccceEEccCCCceEEEEecCCeeecccccCc--HHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999 5688888655555
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.35 E-value=1.1e-11 Score=116.53 Aligned_cols=133 Identities=19% Similarity=0.219 Sum_probs=79.5
Q ss_pred EecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Q 013488 240 TSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVK 319 (442)
Q Consensus 240 ~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~~~~ 319 (442)
.+++|+|..|||++.+... .+..+++|+||+||...++.+++.+.+.+.+.+....
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~ 58 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLL 58 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCCCCCCEEeeeC------------------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcc
Confidence 4678999999999985321 1456789999999999999888888888877766543
Q ss_pred hhccCCCcccccHHHHHHHHHHHHHHHHHHH-----hcccCCCCCCCCCccceeeeeeeeCCEEEEEEEccCeEEE-EeC
Q 013488 320 ECLSDGSVVHSCQEQWKKIFTSCFARVDAEV-----GGKTNQEPVAPETVGSTAVVAIICASHIIVANCGDSRAVL-CRG 393 (442)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L-----~~~~~~~~~~~~~sGSTAvvalI~~~~L~VANvGDSRAVL-~r~ 393 (442)
.. .......+.++.....+...+ ..... ......+||++++++.++.++++|+||||+|+ .++
T Consensus 59 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~ 127 (212)
T PF13672_consen 59 SQ--------ESPSSIEALIRAIKKEILSIVRAFQSAKQAD---LELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRN 127 (212)
T ss_dssp CC--------HHHHHHHHHHHHHHHHHHHHH----HHHHHS---GGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEET
T ss_pred cc--------cchHHHHHHHHHHHHHHHHHhhhhhhhhhcc---ccccccCceEEEEEEECCEEEEEEECCCeEEEEECC
Confidence 21 111102222222222222211 00001 23446799999999999999999999999965 589
Q ss_pred CeeeECCCCCCCCC
Q 013488 394 KESMALSVDHKVRN 407 (442)
Q Consensus 394 g~a~~LT~DHkPs~ 407 (442)
|+...++.||+...
T Consensus 128 g~~~~l~~~~~~~~ 141 (212)
T PF13672_consen 128 GEIQQLTDDHSGEY 141 (212)
T ss_dssp TEEEE-S---BHHH
T ss_pred CEEEEcCCCccchh
Confidence 99999999997433
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.90 E-value=2.6e-09 Score=118.65 Aligned_cols=151 Identities=21% Similarity=0.307 Sum_probs=123.6
Q ss_pred ceEEEEecccCCCCCcccEEEccCccccchhhcccccccCCccccccCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHH
Q 013488 235 PLWGFTSVCGRRPEMEDAVATVPYFLKIPIQMLIGDQVFDGLSKRFSQQTAHFFGVYDGHGGLQVANYCRDRVHTAFAEE 314 (442)
Q Consensus 235 ~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~dg~~~~~~~~~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~ 314 (442)
..||++-..|+|.++--+...+.+|.. .....||.|||-+-..+..+++..+..++.++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~~---------------------~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~ee 580 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFFL---------------------NPQATFGCFDGSRNSRVLSLVQDTMASYLAEE 580 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhccc---------------------CCcceEEEEcCCCchhHHHHHHHHHHHHHHHH
Confidence 458999999999988777766666542 14679999999999999999999999999999
Q ss_pred HHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccceeeeeeeeCC--------EEEEEEEccC
Q 013488 315 IELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPETVGSTAVVAIICAS--------HIIVANCGDS 386 (442)
Q Consensus 315 l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~sGSTAvvalI~~~--------~L~VANvGDS 386 (442)
++...+. .+.++++|+..++++..... ..|..++.+.|..+ ++.+||+|+|
T Consensus 581 v~~~~~e--------------t~~mr~~fl~~~rklg~~g~-------~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c 639 (1081)
T KOG0618|consen 581 VQLYGNE--------------TEQMRNTFLRLNRKLGEEGQ-------VLGGSVVLCQIVEDSLSPASSKTLFAANVGTC 639 (1081)
T ss_pred HHhccCh--------------HHHHHHHHHHHhhhhhhhhc-------cccchhhheeecccccCcccchhhhHhhhccc
Confidence 8876544 34489999999999965443 56777777777643 6999999999
Q ss_pred eEEEEeCCeeeECCCCC-CCCChhHHHHH-HhCCeEe-eeeecc
Q 013488 387 RAVLCRGKESMALSVDH-KVRNFQLWFYL-FICLFLQ-YLLINC 427 (442)
Q Consensus 387 RAVL~r~g~a~~LT~DH-kPs~~~Er~RI-~aGG~V~-~~rV~g 427 (442)
.||+|++|+..++|+-. .+.+++|.+|| ..+|++. .++++|
T Consensus 640 ~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ng 683 (1081)
T KOG0618|consen 640 MAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNG 683 (1081)
T ss_pred hhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeeec
Confidence 99999999999988766 55699999999 8999996 666664
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=98.84 E-value=3e-08 Score=91.85 Aligned_cols=97 Identities=14% Similarity=0.092 Sum_probs=72.9
Q ss_pred CceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 013488 284 TAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPET 363 (442)
Q Consensus 284 ~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~ 363 (442)
...+|+|+||||+...|.+++..+...+.+.+... ..+.+.+.++|+.+.... ...
T Consensus 29 ~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~------------------~~~~~~l~~~n~~l~~~~------~~~ 84 (193)
T smart00331 29 GRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG------------------ISLSQILERLNRAIYENG------EDG 84 (193)
T ss_pred CeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC------------------CCHHHHHHHHHHHHHhcC------CCC
Confidence 36899999999999889999988888887654321 124455667777776541 235
Q ss_pred ccceeeeeee--eCCEEEEEEEccCeEEEEe-CCeeeECCCCCC
Q 013488 364 VGSTAVVAII--CASHIIVANCGDSRAVLCR-GKESMALSVDHK 404 (442)
Q Consensus 364 sGSTAvvalI--~~~~L~VANvGDSRAVL~r-~g~a~~LT~DHk 404 (442)
.|+|++++++ ..++++++|+||+|+++++ ++...+++.+..
T Consensus 85 ~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~ 128 (193)
T smart00331 85 MFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG 128 (193)
T ss_pred cEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC
Confidence 7999999998 5789999999999999998 565555555533
No 16
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=98.62 E-value=1.8e-07 Score=93.82 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=64.6
Q ss_pred CceEEEEEcCCCCc-----HHHHHHHHHHHHHHHHHHHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 013488 284 TAHFFGVYDGHGGL-----QVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEP 358 (442)
Q Consensus 284 ~~~fFgVFDGHGG~-----~vA~~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~ 358 (442)
...+.||+||.||+ ..+.|.++. .....+..+.. .... ......|..+|.++-++
T Consensus 102 ~~~v~GVADGVGGWa~~GiDpg~fS~eL-M~~ce~~v~~~-------~~~~---~~P~~lL~~ay~~l~~~--------- 161 (330)
T KOG1379|consen 102 HAIVMGVADGVGGWAEYGIDPGAFSREL-MSNCERLVQNS-------DFNP---SDPVNLLEKAYAELKSQ--------- 161 (330)
T ss_pred ccceEEEccccchHhhcCcCHHHHHHHH-HHHHHHHhccc-------ccCC---CChHHHHHHHHHHHhhc---------
Confidence 56799999999965 456554443 33333322111 0111 13456677777665321
Q ss_pred CCCCCccceeeeeeee--CCEEEEEEEccCeEEEEeCCeeeECCC
Q 013488 359 VAPETVGSTAVVAIIC--ASHIIVANCGDSRAVLCRGKESMALSV 401 (442)
Q Consensus 359 ~~~~~sGSTAvvalI~--~~~L~VANvGDSRAVL~r~g~a~~LT~ 401 (442)
..+..++|||+++++. +++||+||+|||-..+.|+|+.+.-|.
T Consensus 162 ~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~ 206 (330)
T KOG1379|consen 162 KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSP 206 (330)
T ss_pred CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCc
Confidence 2334588999999998 889999999999999999997655443
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.15 E-value=0.005 Score=69.79 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=68.8
Q ss_pred CceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 013488 284 TAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPET 363 (442)
Q Consensus 284 ~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~ 363 (442)
...+++|.||+|+...|...+....+.+.+.+.. . . -...++..+|+.+.... ...
T Consensus 579 g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~---g-----~----------~~~~ai~~lN~~L~~~~------~~~ 634 (764)
T TIGR02865 579 GKYAVAISDGMGSGPEAAQESSACVRLLEKFLES---G-----F----------DREVAIKTVNSILSLRS------TDE 634 (764)
T ss_pred CEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHc---C-----C----------CHHHHHHHHHHHHHhCC------CCC
Confidence 3468999999996666666666666655443221 1 0 01445667777665432 124
Q ss_pred ccceeeeeeee--CCEEEEEEEccCeEEEEeCCeeeECCCCCCC
Q 013488 364 VGSTAVVAIIC--ASHIIVANCGDSRAVLCRGKESMALSVDHKV 405 (442)
Q Consensus 364 sGSTAvvalI~--~~~L~VANvGDSRAVL~r~g~a~~LT~DHkP 405 (442)
.++|+.+++|+ .+++.++|+|+++.++.|+++..+++..+.|
T Consensus 635 ~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP 678 (764)
T TIGR02865 635 KFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP 678 (764)
T ss_pred eEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce
Confidence 68999999985 6789999999999999999998888777655
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=96.57 E-value=0.051 Score=49.86 Aligned_cols=99 Identities=19% Similarity=0.103 Sum_probs=64.3
Q ss_pred CceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 013488 284 TAHFFGVYDGHGGLQVANYCRDRVHTAFAEEIELVKECLSDGSVVHSCQEQWKKIFTSCFARVDAEVGGKTNQEPVAPET 363 (442)
Q Consensus 284 ~~~fFgVFDGHGG~~vA~~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~~D~~L~~~~~~~~~~~~~ 363 (442)
...++.|.|+.|-.-.|.+.+..+...+........ -..+.+..+|+.+...... ..
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~------------------~p~~~l~~ln~~l~~~~~~-----~~ 59 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGL------------------DPEELLEALNRRLYRDLKG-----DN 59 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTT------------------SHHHHHHHHHHHHHHHTTT-----TS
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCC------------------CHHHHHHHHHHHHHHHhhh-----cc
Confidence 467999999999555556666666666655432110 0344455566666333221 13
Q ss_pred ccceeeeeeee--CCEEEEEEEccCeEEEEeC--CeeeECCCCCCC
Q 013488 364 VGSTAVVAIIC--ASHIIVANCGDSRAVLCRG--KESMALSVDHKV 405 (442)
Q Consensus 364 sGSTAvvalI~--~~~L~VANvGDSRAVL~r~--g~a~~LT~DHkP 405 (442)
.++|++++++. .++++++|+|+++++++|+ +....+.....|
T Consensus 60 ~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~ 105 (193)
T PF07228_consen 60 RYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGPP 105 (193)
T ss_dssp TTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBB
T ss_pred ccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeecccCccc
Confidence 67888888875 5689999999999999998 455555544444
Done!