Query 013492
Match_columns 442
No_of_seqs 219 out of 1708
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 11:35:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013492.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013492hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3doc_A Glyceraldehyde 3-phosph 100.0 2E-121 7E-126 916.5 33.8 334 67-440 1-334 (335)
2 4dib_A GAPDH, glyceraldehyde 3 100.0 3E-121 1E-125 918.0 32.0 332 68-441 4-336 (345)
3 3pym_A GAPDH 3, glyceraldehyde 100.0 4E-120 2E-124 906.1 35.7 328 69-439 2-331 (332)
4 3v1y_O PP38, glyceraldehyde-3- 100.0 2E-119 7E-124 902.7 33.7 330 68-440 3-336 (337)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 4E-120 1E-124 913.4 28.2 332 67-440 1-353 (359)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 3E-118 1E-122 896.6 35.8 329 68-440 7-338 (346)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 2E-118 6E-123 896.1 32.6 330 66-441 2-337 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 2E-118 6E-123 901.2 27.6 331 66-439 19-356 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 2E-116 5E-121 881.8 34.1 331 69-440 2-334 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 7E-116 2E-120 880.1 32.0 331 67-439 10-344 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 9E-116 3E-120 878.5 28.5 331 67-441 1-341 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 2E-109 6E-114 828.9 32.1 328 69-440 1-329 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 1E-108 4E-113 836.4 33.5 335 67-441 1-337 (380)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 5E-108 2E-112 820.4 34.4 336 68-442 1-336 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 1E-107 4E-112 816.8 35.5 336 67-442 1-338 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 7E-106 2E-110 802.8 32.7 330 69-440 2-332 (334)
17 3cps_A Glyceraldehyde 3-phosph 100.0 4E-105 1E-109 804.2 31.7 335 64-440 13-352 (354)
18 1hdg_O Holo-D-glyceraldehyde-3 100.0 2E-104 7E-109 791.8 33.0 330 69-439 1-331 (332)
19 1gad_O D-glyceraldehyde-3-phos 100.0 5E-104 2E-108 788.2 32.4 327 69-438 2-329 (330)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 5E-104 2E-108 790.7 31.1 332 67-440 1-336 (339)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 2E-103 7E-108 785.1 34.2 331 67-440 2-336 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 1E-102 4E-107 777.6 33.2 331 67-440 2-334 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 5E-61 1.7E-65 480.3 15.2 241 67-374 1-253 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 3.5E-49 1.2E-53 391.9 19.9 291 69-439 1-329 (331)
25 2hjs_A USG-1 protein homolog; 100.0 3E-48 1E-52 386.1 25.3 302 67-440 5-336 (340)
26 1cf2_P Protein (glyceraldehyde 100.0 2.4E-49 8E-54 394.0 10.8 274 68-423 1-285 (337)
27 2r00_A Aspartate-semialdehyde 100.0 4.6E-47 1.6E-51 377.1 25.9 298 68-439 3-333 (336)
28 1b7g_O Protein (glyceraldehyde 100.0 7.2E-47 2.5E-51 376.6 11.5 227 68-373 1-245 (340)
29 2czc_A Glyceraldehyde-3-phosph 100.0 2.3E-46 7.7E-51 370.3 13.2 239 67-376 1-246 (334)
30 1t4b_A Aspartate-semialdehyde 100.0 4.2E-44 1.4E-48 360.7 10.0 237 69-372 2-299 (367)
31 1xyg_A Putative N-acetyl-gamma 100.0 4E-41 1.4E-45 337.4 19.1 291 68-439 16-345 (359)
32 2ep5_A 350AA long hypothetical 100.0 1.4E-41 4.6E-46 338.8 13.1 240 68-373 4-270 (350)
33 1ys4_A Aspartate-semialdehyde 100.0 1.6E-39 5.4E-44 323.7 14.0 243 67-373 7-276 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 2E-38 6.8E-43 316.1 17.1 287 68-438 4-330 (345)
35 4dpk_A Malonyl-COA/succinyl-CO 100.0 7.9E-36 2.7E-40 300.0 13.5 305 67-440 6-354 (359)
36 4dpl_A Malonyl-COA/succinyl-CO 100.0 7.9E-36 2.7E-40 300.0 12.5 305 67-440 6-354 (359)
37 3pwk_A Aspartate-semialdehyde 100.0 5.2E-34 1.8E-38 288.1 22.0 294 67-439 1-343 (366)
38 3uw3_A Aspartate-semialdehyde 100.0 3E-35 1E-39 298.2 9.1 294 68-439 4-376 (377)
39 3tz6_A Aspartate-semialdehyde 100.0 3.1E-33 1.1E-37 280.3 22.4 291 69-439 2-342 (344)
40 3pzr_A Aspartate-semialdehyde 100.0 5.7E-35 2E-39 295.5 9.6 293 69-439 1-368 (370)
41 3dr3_A N-acetyl-gamma-glutamyl 100.0 7.6E-33 2.6E-37 276.6 14.2 293 69-439 5-329 (337)
42 2nqt_A N-acetyl-gamma-glutamyl 100.0 1.7E-31 5.9E-36 267.9 19.5 296 68-438 9-337 (352)
43 3hsk_A Aspartate-semialdehyde 100.0 9E-32 3.1E-36 273.0 16.3 241 67-374 18-301 (381)
44 1vkn_A N-acetyl-gamma-glutamyl 99.9 1.2E-24 4.1E-29 219.0 15.8 228 68-372 13-272 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.4 4E-06 1.4E-10 82.6 14.0 137 68-237 4-149 (312)
46 3ohs_X Trans-1,2-dihydrobenzen 97.7 5.6E-05 1.9E-09 73.2 8.0 98 67-191 1-98 (334)
47 1f06_A MESO-diaminopimelate D- 97.6 5.9E-05 2E-09 73.7 6.6 88 68-191 3-90 (320)
48 4hkt_A Inositol 2-dehydrogenas 97.6 0.00012 4.2E-09 70.6 7.8 94 67-191 2-95 (331)
49 3ezy_A Dehydrogenase; structur 97.6 0.00012 4.1E-09 71.1 7.6 96 67-191 1-96 (344)
50 3mz0_A Inositol 2-dehydrogenas 97.5 0.00016 5.5E-09 70.2 7.8 97 67-191 1-98 (344)
51 3bio_A Oxidoreductase, GFO/IDH 97.5 0.00019 6.5E-09 69.7 7.5 86 68-188 9-94 (304)
52 3kux_A Putative oxidoreductase 97.5 0.00036 1.2E-08 68.1 9.4 92 68-191 7-99 (352)
53 3i23_A Oxidoreductase, GFO/IDH 97.4 0.00027 9.3E-09 69.0 7.7 94 67-189 1-95 (349)
54 3gdo_A Uncharacterized oxidore 97.4 0.00044 1.5E-08 67.9 8.9 92 68-191 5-97 (358)
55 3ec7_A Putative dehydrogenase; 97.4 0.00036 1.2E-08 68.6 8.0 98 67-191 22-119 (357)
56 3e82_A Putative oxidoreductase 97.3 0.00052 1.8E-08 67.7 8.7 93 67-191 6-99 (364)
57 3cea_A MYO-inositol 2-dehydrog 97.3 0.00054 1.8E-08 66.0 8.4 92 68-188 8-100 (346)
58 3e9m_A Oxidoreductase, GFO/IDH 97.3 0.00042 1.4E-08 67.2 7.5 96 67-191 4-99 (330)
59 3ijp_A DHPR, dihydrodipicolina 97.3 7.6E-05 2.6E-09 73.5 2.1 97 67-188 20-117 (288)
60 3euw_A MYO-inositol dehydrogen 97.3 0.00056 1.9E-08 66.3 8.1 94 68-191 4-97 (344)
61 3evn_A Oxidoreductase, GFO/IDH 97.3 0.00042 1.4E-08 67.0 7.1 95 68-191 5-99 (329)
62 3e18_A Oxidoreductase; dehydro 97.2 0.00075 2.6E-08 66.4 8.7 93 68-191 5-97 (359)
63 3db2_A Putative NADPH-dependen 97.2 0.00077 2.6E-08 65.7 8.5 95 67-191 4-98 (354)
64 3fhl_A Putative oxidoreductase 97.2 0.00066 2.3E-08 66.6 7.9 92 68-191 5-97 (362)
65 1ydw_A AX110P-like protein; st 97.2 0.00054 1.8E-08 67.0 7.2 95 68-188 6-100 (362)
66 4gqa_A NAD binding oxidoreduct 97.2 0.00042 1.4E-08 68.9 6.5 97 68-191 26-128 (412)
67 4had_A Probable oxidoreductase 97.2 0.00075 2.5E-08 65.3 8.0 93 68-189 23-116 (350)
68 4fb5_A Probable oxidoreductase 97.2 0.00073 2.5E-08 65.2 7.9 100 64-190 20-125 (393)
69 3c1a_A Putative oxidoreductase 97.2 0.0006 2.1E-08 65.4 7.1 93 67-191 9-101 (315)
70 4f3y_A DHPR, dihydrodipicolina 97.2 0.0001 3.5E-09 71.7 1.7 96 68-189 7-103 (272)
71 2ejw_A HDH, homoserine dehydro 97.2 0.00088 3E-08 66.8 8.4 88 68-190 3-97 (332)
72 3f4l_A Putative oxidoreductase 97.2 0.00073 2.5E-08 65.7 7.6 96 67-191 1-97 (345)
73 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.0013 4.3E-08 63.3 8.3 94 68-191 1-94 (325)
74 4h3v_A Oxidoreductase domain p 97.1 0.00042 1.4E-08 66.8 4.9 97 68-191 6-107 (390)
75 3q2i_A Dehydrogenase; rossmann 97.0 0.0012 4E-08 64.4 7.7 96 67-191 12-107 (354)
76 3mtj_A Homoserine dehydrogenas 97.0 0.0012 4E-08 68.5 7.8 94 68-191 10-111 (444)
77 1zh8_A Oxidoreductase; TM0312, 97.0 0.0014 4.6E-08 64.0 7.7 98 66-191 16-114 (340)
78 3do5_A HOM, homoserine dehydro 97.0 0.0011 3.7E-08 65.9 7.0 36 68-103 2-43 (327)
79 2ixa_A Alpha-N-acetylgalactosa 97.0 0.0017 5.8E-08 65.7 8.5 99 68-189 20-121 (444)
80 1h6d_A Precursor form of gluco 97.0 0.0017 5.8E-08 65.9 8.4 97 68-189 83-180 (433)
81 3ing_A Homoserine dehydrogenas 96.9 0.0025 8.5E-08 63.3 9.1 36 68-103 4-43 (325)
82 2dc1_A L-aspartate dehydrogena 96.9 0.00096 3.3E-08 61.8 5.8 80 69-189 1-80 (236)
83 3rc1_A Sugar 3-ketoreductase; 96.9 0.0012 4.2E-08 64.6 6.8 94 68-191 27-121 (350)
84 3moi_A Probable dehydrogenase; 96.9 0.001 3.6E-08 65.9 6.1 95 67-191 1-96 (387)
85 3qy9_A DHPR, dihydrodipicolina 96.9 0.0013 4.3E-08 63.0 6.2 32 69-103 4-35 (243)
86 3uuw_A Putative oxidoreductase 96.9 0.0017 5.7E-08 62.0 7.0 92 68-191 6-98 (308)
87 3m2t_A Probable dehydrogenase; 96.8 0.0019 6.6E-08 63.4 6.9 95 68-191 5-100 (359)
88 1tlt_A Putative oxidoreductase 96.8 0.0034 1.2E-07 60.1 8.3 92 68-191 5-97 (319)
89 1p9l_A Dihydrodipicolinate red 96.8 0.0016 5.6E-08 62.3 6.1 72 69-188 1-74 (245)
90 3c8m_A Homoserine dehydrogenas 96.8 0.001 3.5E-08 65.8 4.8 36 68-103 6-46 (331)
91 3ic5_A Putative saccharopine d 96.7 0.0024 8.2E-08 50.9 5.8 97 67-189 4-100 (118)
92 1xea_A Oxidoreductase, GFO/IDH 96.7 0.0052 1.8E-07 59.1 9.1 94 67-191 1-95 (323)
93 1lc0_A Biliverdin reductase A; 96.6 0.0029 9.8E-08 60.8 6.6 88 68-189 7-95 (294)
94 2glx_A 1,5-anhydro-D-fructose 96.6 0.0044 1.5E-07 59.3 7.7 91 69-189 1-92 (332)
95 1dih_A Dihydrodipicolinate red 96.6 0.0031 1.1E-07 60.9 6.7 99 68-191 5-104 (273)
96 3upl_A Oxidoreductase; rossman 96.5 0.0028 9.6E-08 65.9 6.4 107 67-183 22-133 (446)
97 3ip3_A Oxidoreductase, putativ 96.5 0.0014 4.9E-08 63.5 3.9 95 67-190 1-98 (337)
98 3o9z_A Lipopolysaccaride biosy 96.4 0.0068 2.3E-07 58.7 8.0 92 68-189 3-102 (312)
99 2p2s_A Putative oxidoreductase 96.4 0.0073 2.5E-07 58.2 8.2 94 68-191 4-98 (336)
100 4ew6_A D-galactose-1-dehydroge 96.4 0.0032 1.1E-07 61.4 5.4 85 68-189 25-111 (330)
101 3oa2_A WBPB; oxidoreductase, s 96.2 0.011 3.7E-07 57.4 8.0 92 68-189 3-103 (318)
102 2nvw_A Galactose/lactose metab 96.0 0.0086 2.9E-07 61.8 6.8 99 68-191 39-146 (479)
103 1j5p_A Aspartate dehydrogenase 96.0 0.0081 2.8E-07 58.2 6.2 80 68-190 12-91 (253)
104 3u3x_A Oxidoreductase; structu 95.8 0.012 4.3E-07 57.8 6.6 94 68-191 26-120 (361)
105 3v5n_A Oxidoreductase; structu 95.8 0.018 6.2E-07 57.8 7.6 102 68-191 37-142 (417)
106 3btv_A Galactose/lactose metab 95.8 0.0065 2.2E-07 61.6 4.4 99 68-191 20-127 (438)
107 3dty_A Oxidoreductase, GFO/IDH 95.7 0.016 5.6E-07 57.5 6.8 95 68-188 12-114 (398)
108 1r0k_A 1-deoxy-D-xylulose 5-ph 95.5 0.011 3.7E-07 60.5 4.9 110 69-190 5-123 (388)
109 2dt5_A AT-rich DNA-binding pro 95.5 0.022 7.5E-07 53.3 6.5 96 68-193 80-175 (211)
110 3oqb_A Oxidoreductase; structu 95.4 0.017 5.7E-07 56.7 5.8 93 67-188 5-112 (383)
111 4gmf_A Yersiniabactin biosynth 95.1 0.057 2E-06 54.2 8.7 92 68-191 7-102 (372)
112 2vt3_A REX, redox-sensing tran 94.3 0.071 2.4E-06 50.0 6.7 100 68-197 85-184 (215)
113 1ebf_A Homoserine dehydrogenas 94.0 0.05 1.7E-06 54.5 5.2 37 67-103 3-40 (358)
114 3keo_A Redox-sensing transcrip 93.8 0.073 2.5E-06 50.2 5.6 99 68-192 84-182 (212)
115 3abi_A Putative uncharacterize 93.7 0.13 4.3E-06 50.6 7.4 93 68-191 16-108 (365)
116 3ius_A Uncharacterized conserv 93.5 0.45 1.5E-05 43.6 10.3 33 67-102 4-36 (286)
117 3c24_A Putative oxidoreductase 93.5 0.2 6.7E-06 47.2 8.1 32 67-101 10-42 (286)
118 3ggo_A Prephenate dehydrogenas 93.4 0.21 7.2E-06 48.6 8.3 34 67-101 32-65 (314)
119 3fwz_A Inner membrane protein 93.4 0.082 2.8E-06 44.8 4.7 36 64-102 3-38 (140)
120 2g1u_A Hypothetical protein TM 93.3 0.2 6.9E-06 42.8 7.1 31 69-102 20-50 (155)
121 3dqp_A Oxidoreductase YLBE; al 92.9 0.3 1E-05 43.2 7.9 31 69-102 1-32 (219)
122 3d1l_A Putative NADP oxidoredu 92.9 0.19 6.6E-06 46.4 6.8 32 69-103 11-42 (266)
123 2bma_A Glutamate dehydrogenase 92.6 0.24 8.2E-06 51.9 7.9 103 69-189 253-366 (470)
124 3ew7_A LMO0794 protein; Q8Y8U8 92.4 0.2 7E-06 43.7 6.1 31 69-102 1-32 (221)
125 3a06_A 1-deoxy-D-xylulose 5-ph 92.2 0.39 1.4E-05 49.1 8.6 107 69-188 4-114 (376)
126 1y81_A Conserved hypothetical 91.9 0.59 2E-05 40.4 8.2 84 68-190 14-101 (138)
127 3kb6_A D-lactate dehydrogenase 91.5 0.22 7.7E-06 49.3 5.8 31 69-102 142-172 (334)
128 3b1f_A Putative prephenate deh 91.2 0.44 1.5E-05 44.6 7.2 33 68-101 6-38 (290)
129 3e8x_A Putative NAD-dependent 91.0 1.1 3.6E-05 40.2 9.3 32 68-102 21-53 (236)
130 2tmg_A Protein (glutamate dehy 90.9 0.45 1.5E-05 49.0 7.5 95 68-190 209-314 (415)
131 3m2p_A UDP-N-acetylglucosamine 90.9 0.45 1.5E-05 44.3 7.0 33 67-102 1-34 (311)
132 3dhn_A NAD-dependent epimerase 90.8 0.38 1.3E-05 42.5 6.1 31 69-102 5-36 (227)
133 4g2n_A D-isomer specific 2-hyd 90.6 0.21 7.2E-06 49.9 4.7 31 69-102 174-204 (345)
134 2pi1_A D-lactate dehydrogenase 90.5 0.21 7.3E-06 49.4 4.6 32 69-103 142-173 (334)
135 1i36_A Conserved hypothetical 90.4 0.54 1.8E-05 43.3 6.9 31 69-103 1-31 (264)
136 1bgv_A Glutamate dehydrogenase 90.4 0.44 1.5E-05 49.7 7.0 103 69-190 231-345 (449)
137 3evt_A Phosphoglycerate dehydr 90.4 0.24 8.1E-06 49.0 4.8 31 69-102 138-168 (324)
138 3pp8_A Glyoxylate/hydroxypyruv 90.3 0.21 7.3E-06 49.1 4.3 31 69-102 140-170 (315)
139 1qp8_A Formate dehydrogenase; 90.1 0.25 8.4E-06 48.2 4.5 30 69-101 125-154 (303)
140 1dxy_A D-2-hydroxyisocaproate 90.0 0.25 8.7E-06 48.7 4.6 31 69-102 146-176 (333)
141 2yq5_A D-isomer specific 2-hyd 90.0 0.25 8.7E-06 49.3 4.6 31 69-102 149-179 (343)
142 3hg7_A D-isomer specific 2-hyd 89.9 0.26 8.8E-06 48.9 4.6 31 69-102 141-171 (324)
143 1qyd_A Pinoresinol-lariciresin 89.9 0.23 8E-06 46.0 4.1 31 69-102 5-36 (313)
144 1xdw_A NAD+-dependent (R)-2-hy 89.9 0.26 8.9E-06 48.5 4.6 31 69-102 147-177 (331)
145 3vps_A TUNA, NAD-dependent epi 89.9 0.55 1.9E-05 43.3 6.5 33 67-102 6-39 (321)
146 3e48_A Putative nucleoside-dip 89.7 0.24 8.1E-06 45.6 3.9 32 69-102 1-33 (289)
147 3gg9_A D-3-phosphoglycerate de 89.7 0.28 9.5E-06 49.1 4.6 31 69-102 161-191 (352)
148 2nu8_A Succinyl-COA ligase [AD 89.6 0.4 1.4E-05 46.3 5.6 87 68-188 7-94 (288)
149 2r6j_A Eugenol synthase 1; phe 89.6 0.22 7.5E-06 46.6 3.6 33 67-102 10-43 (318)
150 2g76_A 3-PGDH, D-3-phosphoglyc 89.6 0.29 9.8E-06 48.6 4.7 32 69-103 166-197 (335)
151 3c1o_A Eugenol synthase; pheny 89.6 0.28 9.5E-06 45.9 4.3 32 68-102 4-36 (321)
152 1lss_A TRK system potassium up 89.3 0.43 1.5E-05 38.8 4.8 31 69-102 5-35 (140)
153 4hy3_A Phosphoglycerate oxidor 89.2 0.28 9.7E-06 49.5 4.3 32 69-103 177-208 (365)
154 4e5n_A Thermostable phosphite 89.2 0.25 8.5E-06 48.8 3.8 32 69-103 146-177 (330)
155 3jtm_A Formate dehydrogenase, 89.1 0.29 9.9E-06 49.0 4.3 31 69-102 165-195 (351)
156 1gtm_A Glutamate dehydrogenase 89.1 0.36 1.2E-05 49.6 5.0 32 69-103 213-245 (419)
157 1gdh_A D-glycerate dehydrogena 89.1 0.33 1.1E-05 47.5 4.7 31 69-102 147-177 (320)
158 2duw_A Putative COA-binding pr 89.1 1 3.4E-05 39.1 7.2 85 69-190 14-102 (145)
159 2yfq_A Padgh, NAD-GDH, NAD-spe 89.0 0.37 1.3E-05 49.7 5.1 33 69-104 213-245 (421)
160 3gvx_A Glycerate dehydrogenase 88.8 0.28 9.7E-06 47.8 3.9 31 69-102 123-153 (290)
161 1vpd_A Tartronate semialdehyde 88.8 0.36 1.2E-05 45.2 4.4 32 67-101 4-35 (299)
162 1wwk_A Phosphoglycerate dehydr 88.8 0.36 1.2E-05 47.0 4.6 32 69-103 143-174 (307)
163 1mx3_A CTBP1, C-terminal bindi 88.8 0.36 1.2E-05 48.2 4.7 31 69-102 169-199 (347)
164 2cuk_A Glycerate dehydrogenase 88.6 0.38 1.3E-05 47.0 4.6 31 69-102 145-175 (311)
165 1j4a_A D-LDH, D-lactate dehydr 88.6 0.37 1.3E-05 47.4 4.6 32 69-103 147-178 (333)
166 3ce6_A Adenosylhomocysteinase; 88.6 0.44 1.5E-05 50.0 5.4 30 69-101 275-304 (494)
167 4dgs_A Dehydrogenase; structur 88.6 0.38 1.3E-05 48.0 4.7 31 69-102 172-202 (340)
168 3llv_A Exopolyphosphatase-rela 88.4 0.42 1.4E-05 39.8 4.2 31 69-102 7-37 (141)
169 3oet_A Erythronate-4-phosphate 88.2 0.4 1.4E-05 48.8 4.6 30 69-101 120-149 (381)
170 2ekl_A D-3-phosphoglycerate de 88.1 0.43 1.5E-05 46.6 4.6 32 69-103 143-174 (313)
171 1sc6_A PGDH, D-3-phosphoglycer 88.0 0.41 1.4E-05 48.7 4.6 31 69-102 146-176 (404)
172 2o4c_A Erythronate-4-phosphate 87.8 0.44 1.5E-05 48.4 4.6 30 69-101 117-146 (380)
173 2w2k_A D-mandelate dehydrogena 87.7 0.47 1.6E-05 47.0 4.7 31 69-102 164-195 (348)
174 3aog_A Glutamate dehydrogenase 87.6 1.5 5.1E-05 45.6 8.5 95 68-190 235-339 (440)
175 3i6i_A Putative leucoanthocyan 87.4 0.36 1.2E-05 46.0 3.5 31 69-102 11-42 (346)
176 4ina_A Saccharopine dehydrogen 87.3 0.36 1.2E-05 48.5 3.7 98 69-184 2-102 (405)
177 1qyc_A Phenylcoumaran benzylic 87.1 0.39 1.3E-05 44.4 3.5 31 69-102 5-36 (308)
178 3gt0_A Pyrroline-5-carboxylate 86.9 0.48 1.6E-05 43.6 4.0 25 67-91 1-25 (247)
179 1vm6_A DHPR, dihydrodipicolina 86.9 1.1 3.7E-05 42.9 6.5 69 68-186 12-81 (228)
180 1iuk_A Hypothetical protein TT 86.9 1.2 4.2E-05 38.4 6.4 86 69-191 14-103 (140)
181 2dbq_A Glyoxylate reductase; D 86.8 0.56 1.9E-05 46.0 4.6 32 69-103 151-182 (334)
182 2nac_A NAD-dependent formate d 86.8 0.48 1.6E-05 48.2 4.3 32 69-103 192-223 (393)
183 3l4b_C TRKA K+ channel protien 86.8 0.44 1.5E-05 42.9 3.6 31 69-102 1-31 (218)
184 2d59_A Hypothetical protein PH 86.7 1.4 4.7E-05 38.1 6.6 83 69-190 23-109 (144)
185 3ba1_A HPPR, hydroxyphenylpyru 86.6 0.49 1.7E-05 46.8 4.1 30 69-101 165-194 (333)
186 2gcg_A Glyoxylate reductase/hy 86.6 0.49 1.7E-05 46.3 4.1 31 69-102 156-186 (330)
187 2d0i_A Dehydrogenase; structur 86.4 0.53 1.8E-05 46.3 4.3 31 69-102 147-177 (333)
188 3ff4_A Uncharacterized protein 86.4 1.9 6.6E-05 36.9 7.3 82 69-190 5-90 (122)
189 1id1_A Putative potassium chan 86.3 0.68 2.3E-05 39.3 4.4 31 69-102 4-34 (153)
190 3k5p_A D-3-phosphoglycerate de 86.0 0.61 2.1E-05 48.0 4.6 31 69-102 157-187 (416)
191 3d4o_A Dipicolinate synthase s 85.9 0.71 2.4E-05 44.0 4.8 31 69-102 156-186 (293)
192 2ew2_A 2-dehydropantoate 2-red 85.8 0.72 2.5E-05 42.8 4.6 33 67-102 2-34 (316)
193 2j6i_A Formate dehydrogenase; 85.6 0.53 1.8E-05 47.1 3.8 31 69-102 165-196 (364)
194 2vns_A Metalloreductase steap3 85.3 0.71 2.4E-05 41.9 4.3 31 68-101 28-58 (215)
195 2gas_A Isoflavone reductase; N 85.2 0.48 1.6E-05 43.7 3.1 31 69-102 3-34 (307)
196 2rir_A Dipicolinate synthase, 85.2 0.81 2.8E-05 43.7 4.8 31 69-102 158-188 (300)
197 3two_A Mannitol dehydrogenase; 85.0 1.5 5.1E-05 42.3 6.5 82 69-183 178-259 (348)
198 3g0o_A 3-hydroxyisobutyrate de 85.0 0.81 2.8E-05 43.5 4.6 32 67-101 6-37 (303)
199 3c85_A Putative glutathione-re 84.8 0.62 2.1E-05 40.5 3.5 32 68-102 39-71 (183)
200 1oi7_A Succinyl-COA synthetase 84.7 0.91 3.1E-05 43.9 4.9 86 68-188 7-94 (288)
201 3r3j_A Glutamate dehydrogenase 84.7 1.7 5.7E-05 45.5 7.1 104 68-189 239-353 (456)
202 4huj_A Uncharacterized protein 84.7 0.58 2E-05 42.6 3.3 33 68-103 23-55 (220)
203 1yb4_A Tartronic semialdehyde 83.9 0.66 2.3E-05 43.2 3.4 30 69-101 4-33 (295)
204 3cky_A 2-hydroxymethyl glutara 83.8 0.97 3.3E-05 42.3 4.5 31 68-101 4-34 (301)
205 3qha_A Putative oxidoreductase 83.5 0.74 2.5E-05 43.8 3.6 31 68-101 15-45 (296)
206 3k92_A NAD-GDH, NAD-specific g 83.4 3.2 0.00011 43.0 8.5 34 68-104 221-254 (424)
207 3sc6_A DTDP-4-dehydrorhamnose 83.3 0.98 3.4E-05 41.3 4.3 32 67-101 4-36 (287)
208 2ahr_A Putative pyrroline carb 83.3 0.99 3.4E-05 41.4 4.3 31 69-103 4-34 (259)
209 4egb_A DTDP-glucose 4,6-dehydr 83.2 1.3 4.6E-05 41.6 5.3 34 68-102 24-58 (346)
210 3qvo_A NMRA family protein; st 82.8 1.4 4.7E-05 39.7 5.0 33 68-102 23-56 (236)
211 1ur5_A Malate dehydrogenase; o 82.7 1.1 3.8E-05 43.4 4.6 34 67-103 1-34 (309)
212 3k6j_A Protein F01G10.3, confi 82.3 0.88 3E-05 47.3 3.9 30 69-101 55-84 (460)
213 1leh_A Leucine dehydrogenase; 82.1 2.8 9.5E-05 42.2 7.4 31 69-103 174-204 (364)
214 4dll_A 2-hydroxy-3-oxopropiona 82.0 1.3 4.3E-05 42.8 4.7 31 68-101 31-61 (320)
215 2f1k_A Prephenate dehydrogenas 81.9 1.3 4.5E-05 41.0 4.6 30 69-101 1-30 (279)
216 3dfu_A Uncharacterized protein 81.9 0.53 1.8E-05 44.8 1.9 33 67-102 5-37 (232)
217 1ygy_A PGDH, D-3-phosphoglycer 81.9 1.2 3.9E-05 46.7 4.7 32 69-103 143-174 (529)
218 3l9w_A Glutathione-regulated p 81.8 1 3.4E-05 45.8 4.0 36 69-109 5-40 (413)
219 2hmt_A YUAA protein; RCK, KTN, 81.6 1.1 3.9E-05 36.3 3.6 30 70-102 8-37 (144)
220 3pef_A 6-phosphogluconate dehy 81.5 1.4 4.7E-05 41.4 4.6 30 69-101 2-31 (287)
221 3dtt_A NADP oxidoreductase; st 81.3 1.5 5.2E-05 40.5 4.8 32 67-101 18-49 (245)
222 2zcu_A Uncharacterized oxidore 81.1 4.2 0.00014 36.8 7.6 32 70-102 1-33 (286)
223 1v9l_A Glutamate dehydrogenase 80.9 2.9 9.9E-05 43.1 7.1 32 69-103 211-242 (421)
224 3d64_A Adenosylhomocysteinase; 80.8 1.3 4.5E-05 46.5 4.7 31 69-102 278-308 (494)
225 3doj_A AT3G25530, dehydrogenas 80.6 1.7 5.7E-05 41.6 4.9 31 69-102 22-52 (310)
226 3l6d_A Putative oxidoreductase 80.5 1.3 4.4E-05 42.4 4.1 31 68-101 9-39 (306)
227 2h78_A Hibadh, 3-hydroxyisobut 80.4 1.5 5.1E-05 41.3 4.5 30 69-101 4-33 (302)
228 3aoe_E Glutamate dehydrogenase 80.1 3.2 0.00011 42.8 7.1 32 69-103 219-250 (419)
229 4ezb_A Uncharacterized conserv 80.1 1.7 5.7E-05 42.1 4.8 35 66-102 22-56 (317)
230 2raf_A Putative dinucleotide-b 79.9 1.8 6E-05 39.2 4.6 30 68-100 19-48 (209)
231 3gg2_A Sugar dehydrogenase, UD 79.9 1.5 5.2E-05 44.9 4.6 32 67-101 1-32 (450)
232 1jay_A Coenzyme F420H2:NADP+ o 79.8 2 6.7E-05 38.0 4.8 31 69-102 1-32 (212)
233 2g5c_A Prephenate dehydrogenas 79.7 1.7 6E-05 40.3 4.7 32 69-101 2-33 (281)
234 2uyy_A N-PAC protein; long-cha 79.4 1.7 5.7E-05 41.2 4.5 31 68-101 30-60 (316)
235 2gf2_A Hibadh, 3-hydroxyisobut 79.2 1.4 4.9E-05 41.0 3.9 30 69-101 1-30 (296)
236 1v8b_A Adenosylhomocysteinase; 78.8 1.3 4.6E-05 46.3 3.9 31 69-102 258-288 (479)
237 1xgk_A Nitrogen metabolite rep 78.7 3.1 0.00011 40.3 6.2 32 68-102 5-37 (352)
238 4e21_A 6-phosphogluconate dehy 78.5 1.8 6.3E-05 43.0 4.6 31 69-102 23-53 (358)
239 3mw9_A GDH 1, glutamate dehydr 78.3 11 0.00038 39.9 10.6 33 68-103 244-276 (501)
240 2hjr_A Malate dehydrogenase; m 78.2 4.3 0.00015 39.7 7.1 34 67-103 13-46 (328)
241 2cvz_A Dehydrogenase, 3-hydrox 77.9 1.6 5.6E-05 40.3 3.8 29 69-101 2-30 (289)
242 4fcc_A Glutamate dehydrogenase 77.8 3.2 0.00011 43.3 6.4 102 68-188 235-347 (450)
243 2yv1_A Succinyl-COA ligase [AD 77.8 2.2 7.7E-05 41.3 4.9 86 68-188 13-100 (294)
244 1q0q_A 1-deoxy-D-xylulose 5-ph 77.7 2.9 9.9E-05 43.2 5.9 44 66-111 8-52 (406)
245 3n58_A Adenosylhomocysteinase; 77.7 1.9 6.5E-05 45.2 4.6 30 69-101 248-277 (464)
246 1bg6_A N-(1-D-carboxylethyl)-L 77.3 2.2 7.5E-05 40.6 4.6 30 69-101 5-34 (359)
247 2pv7_A T-protein [includes: ch 77.3 2.2 7.4E-05 40.7 4.6 32 67-101 20-52 (298)
248 1yqd_A Sinapyl alcohol dehydro 77.2 2.1 7E-05 41.8 4.5 31 69-102 189-219 (366)
249 3h9u_A Adenosylhomocysteinase; 77.1 2 7E-05 44.5 4.6 30 69-101 212-241 (436)
250 1ks9_A KPA reductase;, 2-dehyd 77.0 2.4 8.1E-05 38.9 4.6 31 69-102 1-31 (291)
251 3h2s_A Putative NADH-flavin re 76.8 2.6 8.8E-05 36.9 4.6 31 69-102 1-32 (224)
252 2yv2_A Succinyl-COA synthetase 76.6 3.4 0.00011 40.1 5.8 86 68-188 13-101 (297)
253 4gbj_A 6-phosphogluconate dehy 76.5 1.9 6.5E-05 41.5 4.0 32 67-101 4-35 (297)
254 2z2v_A Hypothetical protein PH 76.5 1.1 3.8E-05 44.6 2.4 91 69-190 17-107 (365)
255 3ktd_A Prephenate dehydrogenas 76.4 2 7E-05 42.6 4.3 31 68-101 8-38 (341)
256 3i83_A 2-dehydropantoate 2-red 76.0 2.5 8.6E-05 40.5 4.7 33 67-102 1-33 (320)
257 4g65_A TRK system potassium up 75.7 1.8 6.2E-05 44.4 3.8 40 68-112 3-42 (461)
258 2wtb_A MFP2, fatty acid multif 75.6 4.3 0.00015 44.2 6.9 30 69-101 313-342 (725)
259 1evy_A Glycerol-3-phosphate de 75.5 2.2 7.4E-05 41.4 4.1 33 67-102 13-46 (366)
260 3ego_A Probable 2-dehydropanto 75.1 2.7 9.2E-05 40.3 4.6 32 67-102 1-32 (307)
261 1c1d_A L-phenylalanine dehydro 75.1 2.6 8.8E-05 42.4 4.6 31 69-103 176-206 (355)
262 1z82_A Glycerol-3-phosphate de 74.8 2.8 9.5E-05 40.3 4.6 34 66-102 12-45 (335)
263 4b4o_A Epimerase family protei 74.7 3.1 0.00011 38.5 4.8 31 69-102 1-32 (298)
264 2yjz_A Metalloreductase steap4 76.7 0.62 2.1E-05 42.4 0.0 32 67-101 18-49 (201)
265 3pdu_A 3-hydroxyisobutyrate de 74.4 1.9 6.4E-05 40.5 3.2 30 69-101 2-31 (287)
266 1np3_A Ketol-acid reductoisome 74.2 2.5 8.5E-05 41.3 4.2 31 69-102 17-47 (338)
267 2axq_A Saccharopine dehydrogen 74.1 2.9 0.0001 43.1 4.9 90 69-183 24-113 (467)
268 1hdo_A Biliverdin IX beta redu 74.1 3.8 0.00013 35.0 4.9 31 69-102 4-35 (206)
269 3qsg_A NAD-binding phosphogluc 73.4 2.5 8.5E-05 40.6 3.9 30 69-101 25-55 (312)
270 3oj0_A Glutr, glutamyl-tRNA re 72.9 1.7 5.7E-05 36.5 2.3 32 68-103 21-52 (144)
271 3eag_A UDP-N-acetylmuramate:L- 72.4 16 0.00053 35.3 9.3 86 69-184 5-92 (326)
272 3gvp_A Adenosylhomocysteinase 72.4 3.1 0.00011 43.2 4.6 30 69-101 221-250 (435)
273 2pgd_A 6-phosphogluconate dehy 71.9 2.9 0.0001 42.9 4.2 31 69-102 3-33 (482)
274 2i76_A Hypothetical protein; N 71.7 1.2 4.1E-05 41.8 1.2 33 67-103 1-33 (276)
275 3hn2_A 2-dehydropantoate 2-red 71.6 2.9 9.9E-05 39.9 3.9 33 67-102 1-33 (312)
276 3nkl_A UDP-D-quinovosamine 4-d 71.4 5.6 0.00019 32.9 5.2 34 68-103 4-37 (141)
277 2x0j_A Malate dehydrogenase; o 71.0 3.7 0.00013 40.1 4.5 23 69-91 1-23 (294)
278 3tri_A Pyrroline-5-carboxylate 70.9 3.2 0.00011 39.3 4.0 34 68-101 3-36 (280)
279 3g17_A Similar to 2-dehydropan 70.8 2.1 7.2E-05 40.5 2.7 32 67-101 1-32 (294)
280 3h8v_A Ubiquitin-like modifier 70.5 2.3 7.8E-05 41.7 2.9 111 69-184 37-164 (292)
281 1ff9_A Saccharopine reductase; 70.5 6 0.0002 40.4 6.1 30 69-101 4-33 (450)
282 2qyt_A 2-dehydropantoate 2-red 70.4 2.8 9.6E-05 39.1 3.4 35 66-102 6-45 (317)
283 3r6d_A NAD-dependent epimerase 70.2 5 0.00017 35.3 4.9 31 69-102 5-38 (221)
284 3nzo_A UDP-N-acetylglucosamine 70.0 26 0.00089 34.5 10.5 32 69-102 36-68 (399)
285 1txg_A Glycerol-3-phosphate de 70.0 3.5 0.00012 38.9 4.0 31 69-102 1-31 (335)
286 1yqg_A Pyrroline-5-carboxylate 69.9 3.7 0.00013 37.5 4.1 31 69-101 1-31 (263)
287 2y1e_A 1-deoxy-D-xylulose 5-ph 69.9 6.1 0.00021 40.7 6.0 42 69-111 22-65 (398)
288 1f0y_A HCDH, L-3-hydroxyacyl-C 69.6 4.9 0.00017 38.0 4.9 30 69-101 16-45 (302)
289 3obb_A Probable 3-hydroxyisobu 68.7 4.5 0.00015 39.1 4.6 32 67-102 3-34 (300)
290 4gwg_A 6-phosphogluconate dehy 68.5 3.8 0.00013 42.8 4.2 32 68-102 4-35 (484)
291 1uuf_A YAHK, zinc-type alcohol 68.4 4 0.00014 39.9 4.2 31 69-102 196-226 (369)
292 4ej6_A Putative zinc-binding d 68.3 7.4 0.00025 38.0 6.0 30 69-101 184-214 (370)
293 2iz1_A 6-phosphogluconate dehy 68.3 3.8 0.00013 42.0 4.1 32 68-102 5-36 (474)
294 4e12_A Diketoreductase; oxidor 67.8 5.1 0.00017 37.7 4.6 30 69-101 5-34 (283)
295 3kkj_A Amine oxidase, flavin-c 67.7 5.1 0.00017 33.2 4.1 32 67-101 1-32 (336)
296 2aef_A Calcium-gated potassium 67.6 3 0.0001 37.6 2.9 31 67-101 8-38 (234)
297 3gpi_A NAD-dependent epimerase 67.3 5 0.00017 36.7 4.4 31 69-102 4-34 (286)
298 1pgj_A 6PGDH, 6-PGDH, 6-phosph 67.0 4.1 0.00014 41.9 4.1 31 69-102 2-32 (478)
299 3c7a_A Octopine dehydrogenase; 66.8 4.9 0.00017 39.5 4.5 33 67-101 1-33 (404)
300 2cf5_A Atccad5, CAD, cinnamyl 66.8 3.5 0.00012 39.9 3.4 30 70-102 183-212 (357)
301 3ip1_A Alcohol dehydrogenase, 66.7 8.1 0.00028 38.1 6.0 30 69-101 215-245 (404)
302 2rcy_A Pyrroline carboxylate r 66.7 3.4 0.00012 37.7 3.1 22 69-90 5-26 (262)
303 2vhw_A Alanine dehydrogenase; 66.6 5.4 0.00019 39.6 4.8 31 69-102 169-199 (377)
304 3ldh_A Lactate dehydrogenase; 66.6 9.7 0.00033 37.9 6.6 23 69-91 22-44 (330)
305 2ydy_A Methionine adenosyltran 66.4 5.8 0.0002 36.6 4.7 32 67-101 1-33 (315)
306 1mv8_A GMD, GDP-mannose 6-dehy 66.2 4.9 0.00017 40.4 4.4 30 69-101 1-30 (436)
307 2zyd_A 6-phosphogluconate dehy 66.1 4.4 0.00015 41.8 4.2 32 68-102 15-46 (480)
308 2a35_A Hypothetical protein PA 66.0 4.6 0.00016 34.9 3.7 34 67-101 4-38 (215)
309 1lld_A L-lactate dehydrogenase 65.6 5.9 0.0002 37.4 4.6 31 68-101 7-39 (319)
310 2p4q_A 6-phosphogluconate dehy 65.1 4.7 0.00016 41.9 4.1 34 66-102 8-41 (497)
311 1e6u_A GDP-fucose synthetase; 64.8 6.7 0.00023 36.2 4.7 30 69-101 4-34 (321)
312 2o3j_A UDP-glucose 6-dehydroge 64.5 5.1 0.00018 41.1 4.2 34 67-101 8-41 (481)
313 2q3e_A UDP-glucose 6-dehydroge 63.8 4.8 0.00016 41.0 3.9 32 69-101 6-37 (467)
314 3q2o_A Phosphoribosylaminoimid 63.7 6.8 0.00023 38.3 4.8 31 69-102 15-45 (389)
315 3phh_A Shikimate dehydrogenase 63.5 46 0.0016 31.9 10.5 32 69-103 119-150 (269)
316 3goh_A Alcohol dehydrogenase, 63.0 7.6 0.00026 36.6 4.9 30 69-101 144-173 (315)
317 1vl0_A DTDP-4-dehydrorhamnose 63.0 8.8 0.0003 35.0 5.1 30 69-101 13-43 (292)
318 3fpc_A NADP-dependent alcohol 62.4 4.1 0.00014 39.2 2.9 30 69-101 168-198 (352)
319 2d5c_A AROE, shikimate 5-dehyd 62.2 6.4 0.00022 36.5 4.1 30 70-102 118-147 (263)
320 2dq4_A L-threonine 3-dehydroge 61.9 4.4 0.00015 38.9 3.0 30 69-101 166-196 (343)
321 2x4g_A Nucleoside-diphosphate- 61.8 8.6 0.00029 35.7 4.9 31 69-102 14-45 (342)
322 1x13_A NAD(P) transhydrogenase 61.3 7.3 0.00025 39.2 4.6 30 69-101 173-202 (401)
323 3uko_A Alcohol dehydrogenase c 61.2 6.3 0.00021 38.4 4.0 30 69-101 195-225 (378)
324 1ek6_A UDP-galactose 4-epimera 61.0 7.4 0.00025 36.4 4.3 32 67-101 1-33 (348)
325 2d8a_A PH0655, probable L-thre 61.0 4.4 0.00015 38.9 2.8 30 69-101 169-199 (348)
326 1piw_A Hypothetical zinc-type 60.7 5.1 0.00018 38.7 3.3 31 69-102 181-211 (360)
327 3uog_A Alcohol dehydrogenase; 60.5 8.3 0.00028 37.4 4.7 31 69-102 191-221 (363)
328 1xa0_A Putative NADPH dependen 60.5 14 0.00049 34.8 6.3 30 70-102 152-182 (328)
329 1gpj_A Glutamyl-tRNA reductase 60.2 6.5 0.00022 39.3 4.0 31 69-102 168-199 (404)
330 4a2c_A Galactitol-1-phosphate 60.2 2 6.9E-05 40.9 0.3 23 69-91 162-184 (346)
331 2yy7_A L-threonine dehydrogena 60.1 5.5 0.00019 36.5 3.2 35 67-102 1-36 (312)
332 3ruf_A WBGU; rossmann fold, UD 59.2 10 0.00034 35.6 4.9 32 68-102 25-57 (351)
333 3jv7_A ADH-A; dehydrogenase, n 59.1 4.5 0.00015 38.7 2.5 32 69-102 173-204 (345)
334 1l7d_A Nicotinamide nucleotide 59.1 8.6 0.00029 38.1 4.6 30 69-101 173-202 (384)
335 3ghy_A Ketopantoate reductase 59.0 8 0.00027 37.2 4.3 30 69-101 4-33 (335)
336 3p2y_A Alanine dehydrogenase/p 58.3 7.1 0.00024 39.7 3.9 30 69-101 185-214 (381)
337 1f8f_A Benzyl alcohol dehydrog 58.0 4.9 0.00017 39.0 2.6 29 70-101 193-222 (371)
338 3m6i_A L-arabinitol 4-dehydrog 57.8 6.3 0.00021 38.0 3.3 30 69-101 181-211 (363)
339 3orq_A N5-carboxyaminoimidazol 57.7 13 0.00044 36.4 5.6 31 69-102 13-43 (377)
340 3qwb_A Probable quinone oxidor 57.5 8.1 0.00028 36.7 4.0 31 69-102 150-181 (334)
341 2rh8_A Anthocyanidin reductase 57.4 10 0.00035 35.3 4.6 33 66-101 7-40 (338)
342 2eez_A Alanine dehydrogenase; 57.1 10 0.00035 37.3 4.8 30 69-101 167-196 (369)
343 2b5w_A Glucose dehydrogenase; 56.9 12 0.00042 36.0 5.2 32 69-103 174-208 (357)
344 3slg_A PBGP3 protein; structur 56.8 9.1 0.00031 36.3 4.2 33 68-102 24-57 (372)
345 2izz_A Pyrroline-5-carboxylate 56.8 6.3 0.00022 37.9 3.1 34 69-102 23-57 (322)
346 1xq6_A Unknown protein; struct 56.5 14 0.00048 32.4 5.1 34 68-102 4-38 (253)
347 1zej_A HBD-9, 3-hydroxyacyl-CO 56.3 10 0.00036 36.7 4.6 40 68-113 12-51 (293)
348 3au8_A 1-deoxy-D-xylulose 5-ph 56.2 12 0.00041 39.5 5.2 42 69-111 78-123 (488)
349 3dfz_A SIRC, precorrin-2 dehyd 56.2 19 0.00064 33.8 6.2 31 69-102 32-62 (223)
350 2jhf_A Alcohol dehydrogenase E 56.1 12 0.0004 36.3 5.0 30 69-101 193-223 (374)
351 1rjw_A ADH-HT, alcohol dehydro 56.0 8.5 0.00029 36.8 3.9 30 69-101 166-195 (339)
352 1n2s_A DTDP-4-, DTDP-glucose o 55.6 11 0.00038 34.3 4.5 30 69-102 1-31 (299)
353 1yj8_A Glycerol-3-phosphate de 55.6 6 0.0002 38.6 2.8 24 67-90 20-43 (375)
354 1e3j_A NADP(H)-dependent ketos 55.5 17 0.00058 34.9 5.9 30 69-101 170-199 (352)
355 1dlj_A UDP-glucose dehydrogena 55.1 9.5 0.00033 38.1 4.2 29 69-101 1-29 (402)
356 1p0f_A NADP-dependent alcohol 54.8 8.7 0.0003 37.2 3.8 29 70-101 194-223 (373)
357 4dio_A NAD(P) transhydrogenase 54.8 11 0.00037 38.7 4.6 31 69-103 191-221 (405)
358 3s2e_A Zinc-containing alcohol 54.6 7.2 0.00025 37.2 3.1 31 69-102 168-198 (340)
359 1t2a_A GDP-mannose 4,6 dehydra 54.2 13 0.00044 35.4 4.8 34 66-102 22-56 (375)
360 2fp4_A Succinyl-COA ligase [GD 54.1 11 0.00036 36.8 4.3 87 69-190 14-103 (305)
361 1jw9_B Molybdopterin biosynthe 54.0 1.4 4.7E-05 41.4 -2.0 23 69-91 32-54 (249)
362 1e3i_A Alcohol dehydrogenase, 53.6 11 0.00036 36.6 4.2 30 69-101 197-227 (376)
363 3hwr_A 2-dehydropantoate 2-red 53.6 13 0.00043 35.7 4.6 30 68-100 19-48 (318)
364 4hv4_A UDP-N-acetylmuramate--L 53.4 36 0.0012 34.9 8.2 83 69-183 23-106 (494)
365 3d7l_A LIN1944 protein; APC893 53.0 15 0.00051 31.7 4.6 30 68-101 3-33 (202)
366 4gx0_A TRKA domain protein; me 52.8 10 0.00035 39.1 4.1 31 69-102 349-379 (565)
367 3ko8_A NAD-dependent epimerase 52.8 14 0.00047 33.9 4.6 31 69-102 1-32 (312)
368 3st7_A Capsular polysaccharide 52.5 11 0.00038 35.9 4.1 43 69-113 1-44 (369)
369 2hk9_A Shikimate dehydrogenase 52.3 11 0.00037 35.5 3.9 31 69-102 130-160 (275)
370 2y0c_A BCEC, UDP-glucose dehyd 51.9 13 0.00043 38.4 4.6 31 68-101 8-38 (478)
371 1cdo_A Alcohol dehydrogenase; 51.9 11 0.00039 36.4 4.1 30 69-101 194-224 (374)
372 4dvj_A Putative zinc-dependent 51.8 11 0.00037 36.7 3.9 92 69-184 173-265 (363)
373 1n7h_A GDP-D-mannose-4,6-dehyd 51.4 15 0.00051 35.0 4.8 33 67-102 27-60 (381)
374 2fzw_A Alcohol dehydrogenase c 51.3 10 0.00035 36.6 3.6 30 69-101 192-222 (373)
375 2dpo_A L-gulonate 3-dehydrogen 51.3 13 0.00043 36.4 4.3 39 69-112 7-45 (319)
376 2ph5_A Homospermidine synthase 51.2 8.6 0.0003 40.4 3.3 93 68-190 13-113 (480)
377 2r85_A PURP protein PF1517; AT 51.1 13 0.00044 34.7 4.2 32 67-102 1-32 (334)
378 4a9w_A Monooxygenase; baeyer-v 51.0 28 0.00095 31.9 6.4 32 68-102 3-34 (357)
379 1rpn_A GDP-mannose 4,6-dehydra 50.8 16 0.00055 33.8 4.8 32 68-102 14-46 (335)
380 3k96_A Glycerol-3-phosphate de 50.6 13 0.00045 36.7 4.3 31 68-101 29-59 (356)
381 2ewd_A Lactate dehydrogenase,; 50.1 13 0.00045 35.6 4.1 24 68-91 4-27 (317)
382 3ay3_A NAD-dependent epimerase 50.0 6.9 0.00024 35.5 2.1 33 67-102 1-34 (267)
383 3jyn_A Quinone oxidoreductase; 49.4 7.2 0.00025 37.0 2.2 31 69-102 142-173 (325)
384 4aj2_A L-lactate dehydrogenase 49.4 25 0.00085 34.8 6.1 24 68-91 19-42 (331)
385 2c20_A UDP-glucose 4-epimerase 49.3 18 0.0006 33.5 4.8 31 69-102 2-33 (330)
386 3pid_A UDP-glucose 6-dehydroge 49.2 15 0.0005 37.9 4.6 29 69-101 37-65 (432)
387 2cdc_A Glucose dehydrogenase g 49.0 8.7 0.0003 37.2 2.7 31 69-102 182-212 (366)
388 1y7t_A Malate dehydrogenase; N 49.0 15 0.00052 35.1 4.4 34 68-101 4-42 (327)
389 1pl8_A Human sorbitol dehydrog 48.5 11 0.00036 36.4 3.2 30 69-101 173-203 (356)
390 2vn8_A Reticulon-4-interacting 48.4 13 0.00044 36.1 3.9 30 69-101 185-215 (375)
391 3h5n_A MCCB protein; ubiquitin 48.0 22 0.00075 35.2 5.5 112 68-184 118-236 (353)
392 3mwd_B ATP-citrate synthase; A 47.8 29 0.00099 34.6 6.3 96 68-190 10-113 (334)
393 1a5z_A L-lactate dehydrogenase 47.8 14 0.00047 35.7 3.9 30 69-101 1-32 (319)
394 4gx0_A TRKA domain protein; me 47.6 15 0.0005 37.9 4.3 35 65-102 124-158 (565)
395 2wm3_A NMRA-like family domain 47.4 17 0.00058 33.4 4.3 32 69-102 6-38 (299)
396 1x0v_A GPD-C, GPDH-C, glycerol 47.2 12 0.00042 35.6 3.4 23 68-90 8-30 (354)
397 2c5a_A GDP-mannose-3', 5'-epim 47.2 20 0.00068 34.4 4.9 31 69-102 30-61 (379)
398 2bll_A Protein YFBG; decarboxy 47.1 20 0.00068 33.2 4.8 32 69-102 1-33 (345)
399 1orr_A CDP-tyvelose-2-epimeras 47.1 19 0.00065 33.4 4.6 30 69-101 2-32 (347)
400 1y8q_B Anthracycline-, ubiquit 47.0 19 0.00066 39.0 5.2 111 68-184 17-135 (640)
401 2b69_A UDP-glucuronate decarbo 46.9 20 0.00068 33.6 4.8 31 69-102 28-59 (343)
402 1smk_A Malate dehydrogenase, g 46.7 17 0.00058 35.3 4.4 34 67-101 7-41 (326)
403 1ldn_A L-lactate dehydrogenase 46.3 17 0.00059 35.1 4.3 33 67-100 5-37 (316)
404 2dph_A Formaldehyde dismutase; 46.2 18 0.00061 35.5 4.5 30 69-101 187-217 (398)
405 1pjq_A CYSG, siroheme synthase 46.2 57 0.0019 33.2 8.3 93 69-192 13-107 (457)
406 2p5y_A UDP-glucose 4-epimerase 46.1 20 0.0007 32.9 4.7 30 69-101 1-31 (311)
407 3lk7_A UDP-N-acetylmuramoylala 45.3 72 0.0025 32.0 8.9 85 69-184 10-98 (451)
408 1kjq_A GART 2, phosphoribosylg 45.3 23 0.0008 34.0 5.1 33 67-102 10-42 (391)
409 4id9_A Short-chain dehydrogena 45.1 17 0.0006 33.9 4.1 32 68-102 19-51 (347)
410 3krt_A Crotonyl COA reductase; 45.0 17 0.00059 36.4 4.3 31 69-102 230-261 (456)
411 4hb9_A Similarities with proba 44.8 21 0.00073 33.5 4.6 29 69-100 2-30 (412)
412 1sb8_A WBPP; epimerase, 4-epim 44.8 23 0.0008 33.2 4.9 31 69-102 28-59 (352)
413 3mog_A Probable 3-hydroxybutyr 44.6 16 0.00056 37.7 4.1 30 69-101 6-35 (483)
414 1vj0_A Alcohol dehydrogenase, 44.2 9.7 0.00033 37.2 2.2 31 69-101 197-227 (380)
415 3tqh_A Quinone oxidoreductase; 44.2 18 0.00061 34.2 4.0 30 69-101 154-184 (321)
416 1iow_A DD-ligase, DDLB, D-ALA\ 44.1 22 0.00077 32.6 4.6 33 67-102 1-42 (306)
417 2dwc_A PH0318, 433AA long hypo 44.0 24 0.00083 34.7 5.1 33 67-102 18-50 (433)
418 3enk_A UDP-glucose 4-epimerase 44.0 24 0.00081 32.8 4.7 32 68-102 5-37 (341)
419 3nep_X Malate dehydrogenase; h 44.0 17 0.00058 35.6 3.9 23 69-91 1-23 (314)
420 2i99_A MU-crystallin homolog; 43.9 16 0.00056 35.0 3.7 34 68-103 135-168 (312)
421 4b8w_A GDP-L-fucose synthase; 43.4 17 0.00058 32.8 3.6 24 68-91 6-30 (319)
422 3gqv_A Enoyl reductase; medium 43.4 18 0.00063 35.1 4.1 30 69-101 166-196 (371)
423 1lnq_A MTHK channels, potassiu 43.1 13 0.00045 35.5 2.9 29 69-101 116-144 (336)
424 3gms_A Putative NADPH:quinone 43.1 11 0.00038 36.0 2.4 31 69-102 146-177 (340)
425 3oh8_A Nucleoside-diphosphate 43.1 22 0.00077 36.1 4.8 31 69-102 148-179 (516)
426 2q1w_A Putative nucleotide sug 42.8 24 0.00082 33.0 4.6 31 69-102 22-53 (333)
427 1y6j_A L-lactate dehydrogenase 42.6 22 0.00075 34.5 4.5 24 68-91 7-30 (318)
428 3fbg_A Putative arginate lyase 42.2 12 0.00042 35.8 2.6 31 69-102 152-183 (346)
429 2dkn_A 3-alpha-hydroxysteroid 41.8 29 0.00099 30.6 4.8 30 70-102 3-33 (255)
430 1hyh_A L-hicdh, L-2-hydroxyiso 41.8 20 0.00069 34.1 4.0 32 69-101 2-33 (309)
431 2v6b_A L-LDH, L-lactate dehydr 41.7 25 0.00085 33.7 4.6 29 69-100 1-31 (304)
432 1udb_A Epimerase, UDP-galactos 41.5 26 0.00088 32.6 4.6 30 69-101 1-31 (338)
433 3nx4_A Putative oxidoreductase 41.4 31 0.0011 32.4 5.2 30 70-102 149-179 (324)
434 1tt7_A YHFP; alcohol dehydroge 41.3 18 0.00061 34.2 3.5 31 70-103 153-184 (330)
435 1zcj_A Peroxisomal bifunctiona 41.0 24 0.00083 36.0 4.7 30 69-101 38-67 (463)
436 1pzg_A LDH, lactate dehydrogen 41.0 24 0.00081 34.5 4.4 33 68-103 9-41 (331)
437 1oc2_A DTDP-glucose 4,6-dehydr 41.0 22 0.00075 33.1 4.0 33 69-102 5-38 (348)
438 3fr7_A Putative ketol-acid red 40.9 20 0.00069 38.1 4.1 34 69-102 55-91 (525)
439 3d0o_A L-LDH 1, L-lactate dehy 40.9 22 0.00076 34.4 4.2 23 68-90 6-28 (317)
440 3ax6_A Phosphoribosylaminoimid 40.8 28 0.00097 33.5 4.9 31 69-102 2-32 (380)
441 1y1p_A ARII, aldehyde reductas 40.0 31 0.0011 31.7 4.9 31 69-102 12-43 (342)
442 2pk3_A GDP-6-deoxy-D-LYXO-4-he 39.9 30 0.001 31.7 4.8 31 69-102 13-44 (321)
443 1pjc_A Protein (L-alanine dehy 39.6 28 0.00097 34.0 4.8 31 69-102 168-198 (361)
444 3g79_A NDP-N-acetyl-D-galactos 39.2 27 0.00091 36.3 4.7 32 69-102 19-51 (478)
445 3ado_A Lambda-crystallin; L-gu 39.1 25 0.00085 34.6 4.3 31 69-103 7-37 (319)
446 1h2b_A Alcohol dehydrogenase; 39.1 24 0.00082 34.0 4.1 30 69-101 188-218 (359)
447 1rkx_A CDP-glucose-4,6-dehydra 39.0 31 0.0011 32.3 4.8 31 69-102 10-41 (357)
448 2z1m_A GDP-D-mannose dehydrata 38.7 31 0.001 31.8 4.6 31 69-102 4-35 (345)
449 1i24_A Sulfolipid biosynthesis 38.6 30 0.001 33.0 4.6 30 69-101 12-42 (404)
450 2pzm_A Putative nucleotide sug 38.2 29 0.00099 32.4 4.4 31 69-102 21-52 (330)
451 4dup_A Quinone oxidoreductase; 37.8 11 0.00038 36.3 1.5 31 69-102 169-200 (353)
452 2z04_A Phosphoribosylaminoimid 37.8 28 0.00095 33.3 4.3 31 69-102 2-32 (365)
453 4ffl_A PYLC; amino acid, biosy 37.7 34 0.0012 32.7 4.9 32 67-102 1-32 (363)
454 3ond_A Adenosylhomocysteinase; 37.7 28 0.00097 36.5 4.6 31 69-103 266-296 (488)
455 1omo_A Alanine dehydrogenase; 37.6 30 0.001 33.5 4.5 34 68-103 125-158 (322)
456 1b8p_A Protein (malate dehydro 37.5 29 0.001 33.6 4.4 24 68-91 5-29 (329)
457 4a27_A Synaptic vesicle membra 37.4 8.8 0.0003 36.9 0.7 32 69-102 144-176 (349)
458 2jl1_A Triphenylmethane reduct 37.0 19 0.00064 32.6 2.8 32 70-102 2-34 (287)
459 2hun_A 336AA long hypothetical 36.9 31 0.0011 31.9 4.4 33 69-102 4-37 (336)
460 1kew_A RMLB;, DTDP-D-glucose 4 36.9 28 0.00095 32.6 4.1 32 69-102 1-33 (361)
461 4eye_A Probable oxidoreductase 36.7 24 0.00083 33.7 3.7 31 69-102 161-192 (342)
462 3pqe_A L-LDH, L-lactate dehydr 36.7 29 0.00097 34.2 4.2 31 68-100 5-36 (326)
463 3pi7_A NADH oxidoreductase; gr 36.7 29 0.001 33.1 4.2 30 70-102 167-197 (349)
464 2bka_A CC3, TAT-interacting pr 36.4 32 0.0011 30.2 4.2 32 69-102 19-52 (242)
465 2eih_A Alcohol dehydrogenase; 36.4 31 0.0011 32.8 4.4 30 69-101 168-198 (343)
466 3sxp_A ADP-L-glycero-D-mannohe 36.1 38 0.0013 32.0 4.9 31 69-102 11-44 (362)
467 3vtf_A UDP-glucose 6-dehydroge 35.3 33 0.0011 35.5 4.6 30 69-101 22-51 (444)
468 1gy8_A UDP-galactose 4-epimera 35.3 38 0.0013 32.2 4.8 31 69-102 3-35 (397)
469 3iup_A Putative NADPH:quinone 35.1 23 0.00079 34.6 3.3 30 69-101 172-203 (379)
470 3tl2_A Malate dehydrogenase; c 34.9 38 0.0013 33.1 4.8 29 69-100 9-38 (315)
471 2rbg_A Putative uncharacterize 34.8 11 0.00039 32.9 0.9 26 361-386 72-97 (126)
472 1r6d_A TDP-glucose-4,6-dehydra 34.7 46 0.0016 30.8 5.1 33 69-102 1-38 (337)
473 2p4h_X Vestitone reductase; NA 34.6 39 0.0013 30.9 4.6 29 70-101 3-32 (322)
474 1t2d_A LDH-P, L-lactate dehydr 34.5 38 0.0013 32.9 4.7 32 69-103 5-36 (322)
475 3p7m_A Malate dehydrogenase; p 34.5 40 0.0014 33.0 4.8 29 69-100 6-35 (321)
476 1ez4_A Lactate dehydrogenase; 34.3 33 0.0011 33.3 4.2 23 68-90 5-27 (318)
477 4a0s_A Octenoyl-COA reductase/ 34.2 45 0.0015 33.1 5.3 31 69-102 222-253 (447)
478 1db3_A GDP-mannose 4,6-dehydra 34.2 39 0.0013 31.7 4.6 31 69-102 2-33 (372)
479 3fbs_A Oxidoreductase; structu 34.1 41 0.0014 30.0 4.5 33 67-102 1-33 (297)
480 3k5i_A Phosphoribosyl-aminoimi 33.7 33 0.0011 33.9 4.2 31 68-101 24-54 (403)
481 2ggs_A 273AA long hypothetical 33.5 33 0.0011 30.6 3.8 29 70-102 2-31 (273)
482 1eq2_A ADP-L-glycero-D-mannohe 33.3 40 0.0014 30.6 4.4 31 70-102 1-32 (310)
483 1yvv_A Amine oxidase, flavin-c 33.3 36 0.0012 31.3 4.1 32 67-101 1-32 (336)
484 2egg_A AROE, shikimate 5-dehyd 33.2 41 0.0014 32.1 4.7 31 69-102 142-173 (297)
485 3ihm_A Styrene monooxygenase A 33.1 32 0.0011 34.0 3.9 36 64-102 18-53 (430)
486 1iz0_A Quinone oxidoreductase; 33.1 21 0.00071 33.4 2.5 31 69-102 127-158 (302)
487 3hhp_A Malate dehydrogenase; M 33.1 36 0.0012 33.2 4.2 22 69-90 1-23 (312)
488 2j8z_A Quinone oxidoreductase; 32.7 30 0.001 33.3 3.6 30 69-101 164-194 (354)
489 1oju_A MDH, malate dehydrogena 32.6 33 0.0011 33.2 3.9 23 69-91 1-23 (294)
490 2zqz_A L-LDH, L-lactate dehydr 32.6 36 0.0012 33.2 4.2 24 67-90 8-31 (326)
491 4a7p_A UDP-glucose dehydrogena 32.5 39 0.0013 34.6 4.6 32 68-102 8-39 (446)
492 1wly_A CAAR, 2-haloacrylate re 32.4 28 0.00097 32.9 3.3 31 69-102 147-178 (333)
493 3vku_A L-LDH, L-lactate dehydr 30.9 37 0.0013 33.5 3.9 23 69-91 10-32 (326)
494 2csu_A 457AA long hypothetical 30.7 1.4E+02 0.0047 30.5 8.3 32 69-102 9-44 (457)
495 3aw8_A PURK, phosphoribosylami 30.3 36 0.0012 32.6 3.7 30 70-102 1-30 (369)
496 4e4t_A Phosphoribosylaminoimid 30.0 47 0.0016 33.2 4.6 31 69-102 36-66 (419)
497 3gvi_A Malate dehydrogenase; N 29.6 50 0.0017 32.4 4.6 29 69-100 8-37 (324)
498 2v6g_A Progesterone 5-beta-red 29.6 43 0.0015 31.2 4.0 34 69-102 2-38 (364)
499 1guz_A Malate dehydrogenase; o 29.4 57 0.0019 31.2 4.9 32 69-101 1-32 (310)
500 1uay_A Type II 3-hydroxyacyl-C 29.1 48 0.0017 29.0 4.1 30 69-101 3-33 (242)
No 1
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=2.1e-121 Score=916.48 Aligned_cols=334 Identities=54% Similarity=0.826 Sum_probs=325.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||||||||||.++|+++++..+++|||||||+.++++++|||||||+||+|+++|+ .+++.|.|||+.|.++++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVE-VAGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCE-ECSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEE-EecCEEEECCEEEEEEee
Confidence 6789999999999999999999873346999999999999999999999999999999999 899999999999999999
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhhH
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLA 226 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~La 226 (442)
+||.++||+++|+|||+||||.|+++|+|+.|+++||||||||+|+++++||||||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLA 159 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhhH
Confidence 99999999999999999999999999999999999999999999999778999999999999988899999999999999
Q ss_pred HHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhh
Q 013492 227 PFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRAR 306 (442)
Q Consensus 227 p~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~r 306 (442)
|++|+||++|| |++|+|||||++||+|+++|.+|+||||+|
T Consensus 160 p~lk~L~d~fG---------------------------------------I~~g~mTTvha~T~~q~~~D~p~kd~r~~r 200 (335)
T 3doc_A 160 PVAQVLNDTIG---------------------------------------IEKGFMTTIHSYTGDQPTLDTMHKDLYRAR 200 (335)
T ss_dssp HHHHHHHHHTC---------------------------------------EEEEEEEEEEECCTTSCSSCCCCSSTTTTS
T ss_pred HhHHHHHHHcC---------------------------------------EEEEEEEeeeeccchhhhhcCccccccccc
Confidence 99999999999 999999999999999999998889999999
Q ss_pred ccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCC
Q 013492 307 AAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP 386 (442)
Q Consensus 307 aaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~ 386 (442)
++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|+|+|
T Consensus 201 ~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte~~ 280 (335)
T 3doc_A 201 AAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPTPNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTDEK 280 (335)
T ss_dssp CTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSC
T ss_pred cCcceEecCCCchHHHHHHhccccCCCEEEEEEEeccccccceEEEEEECCCCCHHHHHHHHHHhhcCCcCCeeEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 387 LVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 387 ~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
+||+||++++||||||+.+|++++++|+|+++||||||||||||+||+.+|++.
T Consensus 281 ~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~ 334 (335)
T 3doc_A 281 LVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNEWGFSSRMSDTAVALGKL 334 (335)
T ss_dssp CCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHT
T ss_pred eEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcCccchHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999863
No 2
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=2.9e-121 Score=917.98 Aligned_cols=332 Identities=55% Similarity=0.879 Sum_probs=312.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||||||||||.++|++++++ ++|||||||+.++++++|||||||+||+|+++|+ .+++.|.|||+.|.+++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~--~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~-~~~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKES--AFEIVAINASYPSETLAHLIKYDTVHGKFDGTVE-AFEDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCS--SSEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-ECSSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCC--CceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEE-EcCCEEEECCEEEEEeecC
Confidence 589999999999999999999874 5999999999999999999999999999999999 8999999999999999999
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCC-CCCeEecCCchhhhhH
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLA 226 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~-~~~IISnaSCTTn~La 226 (442)
||.++||+++|+|||+||||.|+++|+|+.|+++||||||||+|+++++||||||||++.|++ .++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 999999999999999999999999999999999999999999999888999999999999997 6899999999999999
Q ss_pred HHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhh
Q 013492 227 PFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRAR 306 (442)
Q Consensus 227 p~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~r 306 (442)
|++|+||++|| |++|+|||||+|||+|+++|.+|+||||+|
T Consensus 161 p~lkvL~d~fG---------------------------------------I~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r 201 (345)
T 4dib_A 161 PVVKVLDEQFG---------------------------------------IENGLMTTVHAYTNDQKNIDNPHKDLRRAR 201 (345)
T ss_dssp HHHHHHHHHHC---------------------------------------EEEEEEEEEECC-------------CCTTS
T ss_pred HHHHHHHHhcC---------------------------------------eEEEEEEeeeeccCCceeccccccccccch
Confidence 99999999999 999999999999999999998889999999
Q ss_pred ccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCC
Q 013492 307 AAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP 386 (442)
Q Consensus 307 aaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~ 386 (442)
++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|+|+|
T Consensus 202 ~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~As~g~lkgil~yte~~ 281 (345)
T 4dib_A 202 ACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEP 281 (345)
T ss_dssp CTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCSSEEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSC
T ss_pred hhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCcccEEEEEEEEECCCCCHHHHHHHHHHhhcCcccceeeeEcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhcC
Q 013492 387 LVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 441 (442)
Q Consensus 387 ~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~~ 441 (442)
+||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|++++
T Consensus 282 ~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~Gys~r~~dl~~~~~~~~ 336 (345)
T 4dib_A 282 LVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWGYSRRVVDLVTLVVDEL 336 (345)
T ss_dssp CCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETTHHHHHHHHHHHHHHHHHH
T ss_pred EeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCCcchHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999998764
No 3
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=4.5e-120 Score=906.05 Aligned_cols=328 Identities=50% Similarity=0.796 Sum_probs=320.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC-CChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~-~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+||||||||||||.++|++++++ ++|||||||+ +++++++|||||||+||+|+++|+ .+++.|.|||+.|.+++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~--~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRP--NVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVS-HDDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHST--TCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEE-ECSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhCC--CcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEE-EcCCEEEECCEEEEEEeec
Confidence 79999999999999999999874 5999999996 899999999999999999999999 8999999999999999999
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhhHH
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAP 227 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~Lap 227 (442)
||.++||+++|+|||+||||.|+++|+|+.|+++||||||||+|+++ +||||||||++.|++.++||||||||||||+|
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap 157 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSST-APMFVMGVNEEKYTSDLKIVSNASCTTNCLAP 157 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSS-SCBCCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCC-CCeEeeccchhhcCccccEEecCcchhhhhHH
Confidence 99999999999999999999999999999999999999999999985 79999999999999888999999999999999
Q ss_pred HHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccc-hhhhhhhh
Q 013492 228 FVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDAS-HRDLRRAR 306 (442)
Q Consensus 228 ~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~-h~d~rr~r 306 (442)
++|+|||+|| |++|+|||||+|||+|+++|.+ ++||||+|
T Consensus 158 ~lkvL~d~fG---------------------------------------I~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r 198 (332)
T 3pym_A 158 LAKVINDAFG---------------------------------------IEEGLMTTVHSLTATQKTVDGPSHKDWRGGR 198 (332)
T ss_dssp HHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSCSSSCCCTTCTGGGS
T ss_pred HHHHHHHhcC---------------------------------------eEEEEEEEEeeccccchhccCCCcccCcccc
Confidence 9999999999 9999999999999999999965 58999999
Q ss_pred ccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCC
Q 013492 307 AAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP 386 (442)
Q Consensus 307 aaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~ 386 (442)
++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|+|+|
T Consensus 199 ~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yte~~ 278 (332)
T 3pym_A 199 TASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDA 278 (332)
T ss_dssp CGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSC
T ss_pred chhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCCCCcEeeEEEEEECCcCCHHHHHHHHHHhccCccCceeEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhh
Q 013492 387 LVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 439 (442)
Q Consensus 387 ~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~ 439 (442)
+||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|++
T Consensus 279 ~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~ 331 (332)
T 3pym_A 279 VVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVAK 331 (332)
T ss_dssp CCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred eEeeccCCCCcceEEccccccccCCCEEEEEEEECCccchHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999975
No 4
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=2.1e-119 Score=902.71 Aligned_cols=330 Identities=47% Similarity=0.798 Sum_probs=321.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC-CChhhhhhhcccCcccccCCc-ceeeecCC-cEEECCEEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEA-DVKPVGTD-GISVDGKVIQVV 144 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~-~~~~~la~LlkyDSt~g~f~~-~v~~~~~~-~i~v~Gk~I~v~ 144 (442)
++||||||||||||.++|++++++ ++|||||||+ .++++++|||||||+||+|++ +|+ .+++ .|.|||+.|.++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~--~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~-~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSE--DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIK-IKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEE-EEETTEEEETTEEEEEE
T ss_pred ceEEEEECCChHHHHHHHHHHhCC--CcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEE-EcCCcEEEECCEEEEEE
Confidence 489999999999999999999874 5999999997 899999999999999999999 999 6777 899999999999
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhh
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 224 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~ 224 (442)
+++||.++||+++|+|||+||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++.++|||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~-d~p~vV~gVN~~~~~~~~~IISnasCTTn~ 158 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNC 158 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS-SSCBCCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC-CCCeECCCCCHHHcCCCCcEEecCchhhhh
Confidence 9999999999999999999999999999999999999999999999998 589999999999999888999999999999
Q ss_pred hHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccch-hhhh
Q 013492 225 LAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASH-RDLR 303 (442)
Q Consensus 225 Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h-~d~r 303 (442)
|+|++|+||++|| |++|+|||||++||+|+++|.+| +|||
T Consensus 159 Lap~lkvL~d~fG---------------------------------------I~~g~mTTvha~T~~q~~~Dg~~~kd~r 199 (337)
T 3v1y_O 159 LAPLAKVIHDNFG---------------------------------------IIEGLMTTVHAITATQKTVDGPSSKDWR 199 (337)
T ss_dssp HHHHHHHHHHHHC---------------------------------------EEEEEEEEEECCCTTSBSSSCCCTTCGG
T ss_pred HHHHHHHHHHhcC---------------------------------------eEEEEEeeeeeccchhhhccCCcccccc
Confidence 9999999999999 99999999999999999999665 8999
Q ss_pred hhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeec
Q 013492 304 RARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC 383 (442)
Q Consensus 304 r~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~ 383 (442)
|+|++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|+
T Consensus 200 ~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~a~~g~lkgil~yt 279 (337)
T 3v1y_O 200 GGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYV 279 (337)
T ss_dssp GGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTBTTEEEE
T ss_pred ccccccceeecCCCChHHHHHHhccccCCcEEEEEEEcCCCCcEEEEEEEEECCCCcHHHHHHHHHHhccCccCCeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 384 DEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 384 ~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
|||+||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|+++
T Consensus 280 e~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~ 336 (337)
T 3v1y_O 280 EEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp CSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred cCCEEeeccCCCCcceEEecccCeEECCCEEEEEEEECCccchHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999876
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=4.3e-120 Score=913.41 Aligned_cols=332 Identities=46% Similarity=0.793 Sum_probs=322.6
Q ss_pred CceeEEEEcCChhHHHHHHH----HHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCCcceeee--------cCCc
Q 013492 67 AKLKVAINGFGRIGRNFLRC----WHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPV--------GTDG 133 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~----l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~~~v~~~--------~~~~ 133 (442)
|++||||||||||||.++|+ ++++ +++||||||| +.++++++|||||||+||+|+++|+ . +++.
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~--~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~-~~~~~~~~~~~~~ 77 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLG--TEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVT-TTKSSPSVAKDDT 77 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBT--TTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEE-EECSCTTSSSCCE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcC--CCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEE-ecccccccCCCCE
Confidence 67899999999999999999 5655 3699999999 7899999999999999999999999 6 8899
Q ss_pred EEECCEEEEEEe-cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCC-C
Q 013492 134 ISVDGKVIQVVS-NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-D 211 (442)
Q Consensus 134 i~v~Gk~I~v~~-~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~-~ 211 (442)
|.|||+.|.+++ +++|.+|||+++|+||||||||.|+++|+|+.|+++||||||||+|+++|+||||||||++.|++ .
T Consensus 78 l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~ 157 (359)
T 3ids_C 78 LVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSE 157 (359)
T ss_dssp EEETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTT
T ss_pred EEECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCC
Confidence 999999999998 99999999999999999999999999999999999999999999999888999999999999998 7
Q ss_pred CCeEecCCchhhhhHHHHHHH-HHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeecccc
Q 013492 212 EPIISNASCTTNCLAPFVKVL-DQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTG 290 (442)
Q Consensus 212 ~~IISnaSCTTn~Lap~lkvL-~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg 290 (442)
++||||||||||||+|++|+| ||+|| |++|+|||||||||
T Consensus 158 ~~IISNaSCTTn~Lap~lkvL~~d~fG---------------------------------------I~~g~mTTvha~T~ 198 (359)
T 3ids_C 158 HHVVSNASCTTNCLAPIVHVLVKEGFG---------------------------------------VQTGLMTTIHSYTA 198 (359)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCC---------------------------------------CSEEEEEEEEECCT
T ss_pred CCEEECCchHhhhHHHhhhhhhhccCC---------------------------------------eEEEEEeeeeeccc
Confidence 899999999999999999999 99999 99999999999999
Q ss_pred chhhhccch-hhhhhhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHH
Q 013492 291 DQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFR 369 (442)
Q Consensus 291 ~Q~~lD~~h-~d~rr~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~ 369 (442)
+|+++|.+| +||||+|++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+
T Consensus 199 tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~vs~~dlt~~lek~~t~eei~~~lk 278 (359)
T 3ids_C 199 TQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTQGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALK 278 (359)
T ss_dssp TSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESCSSCEEEEEEEECSSCCCHHHHHHHHH
T ss_pred hhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhhcCceEEEEEEcCCCCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 999999877 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceeeccCCeeeeccCCCCcceEEeCCCCcccc----CCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 370 ESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMG----DDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 370 ~aa~~~lkgil~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~----~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
++++++|||||+|+|+|+||+||+|++||||||+.+|++++ ++|+|+++||||||||||||+||+.+|+++
T Consensus 279 ~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~ 353 (359)
T 3ids_C 279 RASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASK 353 (359)
T ss_dssp HHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHHHSSCTTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred HhccCccCCceeEecCCEEeeecCCCCcceeEecccceeecccCCCCEEEEeEEECCCcchHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998 899999999999999999999999999875
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=3.4e-118 Score=896.59 Aligned_cols=329 Identities=45% Similarity=0.762 Sum_probs=320.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||||||||||.++|++++++ +||||||| ..++++++|||||||+||+|+++|+ .+++.|.|||+.|.|+++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~---veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~e 82 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG---VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVE-FRNGQLVVDNHEISVYQC 82 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEEECC
T ss_pred eeEEEEECCChHHHHHHHHHHhCC---CEEEEEeCCCCChhHhcccccccCCCCCCCCcEE-EcCCEEEECCEEEEEEec
Confidence 479999999999999999999873 99999999 5799999999999999999999999 899999999999999999
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCC-CCCeEecCCchhhhh
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCL 225 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~-~~~IISnaSCTTn~L 225 (442)
+||.++||+++|+||||||||.|+++|+|+.|+++||||||||+|++ |+||||||||++.|++ .++||||||||||||
T Consensus 83 ~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~-d~plvV~gVN~~~~~~~~~~IISNasCTTn~L 161 (346)
T 3h9e_O 83 KEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP-DAPMFVMGVNENDYNPGSMNIVSNASCTTNCL 161 (346)
T ss_dssp SSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS-SSCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC-CCCeeCcccCHHHcCcccCCEEECCcchhhhH
Confidence 99999999999999999999999999999999999999999999998 5899999999999997 789999999999999
Q ss_pred HHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccc-hhhhhh
Q 013492 226 APFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDAS-HRDLRR 304 (442)
Q Consensus 226 ap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~-h~d~rr 304 (442)
+|++|+|||+|| |++|+|||||||||+|+++|.+ ++||||
T Consensus 162 ap~lkvL~d~fG---------------------------------------I~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~ 202 (346)
T 3h9e_O 162 APLAKVIHERFG---------------------------------------IVEGLMTTVHSYTATQKTVDGPSRKAWRD 202 (346)
T ss_dssp HHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCTTSGGG
T ss_pred HHHHHHHHHHhC---------------------------------------eeEEEEeeeeeccCccccccCCCCCCccc
Confidence 999999999999 9999999999999999999965 589999
Q ss_pred hhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeecc
Q 013492 305 ARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCD 384 (442)
Q Consensus 305 ~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~ 384 (442)
+|++++||||++||++|+++||+|+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|+|
T Consensus 203 ~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVPv~~~s~~dlt~~lek~~t~eei~~~lk~A~~g~lkgil~yte 282 (346)
T 3h9e_O 203 GRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTE 282 (346)
T ss_dssp GSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEEC
T ss_pred cccceeeeecccCchHHhhheechhhcCcEEEEEEEcccccceeEEEEEEECCcCCHHHHHHHHHHhccCccCCceeEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 385 EPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 385 ~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
||+||+||++++||||||+.+|++++|+|+|+++||||||||||||+||+.+|+++
T Consensus 283 ~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~ 338 (346)
T 3h9e_O 283 DEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFSR 338 (346)
T ss_dssp SCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred CCeEeeccCCCCCceeEcccccEEecCCEEEEEEEECCCcchHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999875
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=1.8e-118 Score=896.11 Aligned_cols=330 Identities=46% Similarity=0.703 Sum_probs=321.5
Q ss_pred cCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 66 ~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
.|++||||||||||||.++|++++++ ++|||||||+.++++++|||||||+||+|+++|+ .+++.|.|||+.|.+++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~~--~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~-~~~~~l~inGk~I~v~~ 78 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEVE--GLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVE-VVDGGFRVNGKEVKSFS 78 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTST--TEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEE-EETTEEEETTEEEEEEC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHCC--CceEEEEecCCCHHHHHHHhccCCCCCCcCCeEE-EcCCEEEECCEEEEEEE
Confidence 47899999999999999999999874 5999999999999999999999999999999999 89999999999999999
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhh
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 225 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~L 225 (442)
++||.++||+++|+|||+||||.|+++|+|+.|+++||||||||+|+++|+||||||||++.|++.++||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 158 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHH
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhh
Confidence 99999999999999999999999999999999999999999999999888999999999999998889999999999999
Q ss_pred HHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchh--hhh
Q 013492 226 APFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHR--DLR 303 (442)
Q Consensus 226 ap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~--d~r 303 (442)
+|++|+||++|| |++|+|||||||||+|+++|.+|+ |||
T Consensus 159 ap~lkvL~d~fG---------------------------------------I~~g~mTTvha~T~~q~~~D~~~~k~d~r 199 (338)
T 3lvf_P 159 APVAKVLNDDFG---------------------------------------LVEGLMTTIHAYTGDQNTQDAPHRKGDKR 199 (338)
T ss_dssp HHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSCSSSCCCTTCCTT
T ss_pred HHHHHHHHHhcC---------------------------------------EEEEEEeeeccccchhhhhcCCccccccc
Confidence 999999999999 999999999999999999997776 999
Q ss_pred hhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEcc-CCCHHHHHHHHHhcccccCCCceee
Q 013492 304 RARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSK-KTFAEEVNAAFRESADNELKGILSV 382 (442)
Q Consensus 304 r~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k-~~~~eeV~~a~~~aa~~~lkgil~~ 382 (442)
|+|++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++| ++++||||++|+++++++ |+|
T Consensus 200 ~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~lek~~~t~eei~~~lk~As~g~----l~y 275 (338)
T 3lvf_P 200 RARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGY 275 (338)
T ss_dssp TTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEEESCSSCEEEEEEEEESSSSCCHHHHHHHHHHTCCSS----EEE
T ss_pred cchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEEcCCCceEEEEEEEEEccCCCCHHHHHHHHHHhhcCC----ccc
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999987 999
Q ss_pred ccCCeeeeccCCCCcceEEeCCCCcccc---CCeEEEEEEecCCcchhhhHhHHHHHHhhcC
Q 013492 383 CDEPLVSVDFRCSDVSSTVDSSLTLVMG---DDMVKVIAWYDNEWGYSQRVVDLADIVANNW 441 (442)
Q Consensus 383 ~~~~~VS~Df~~~~~S~~~d~~~t~~~~---~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~~ 441 (442)
+|||+||+||+|++||||||+.+|++++ ++|+|+++||||||||||||+||+.+|+++.
T Consensus 276 te~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk~~~WYDNE~gys~r~~dl~~~~~~~~ 337 (338)
T 3lvf_P 276 TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELS 337 (338)
T ss_dssp ECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEEEEEEECTTHHHHHHHHHHHHHHHHHT
T ss_pred ccCCEEeEeeCCCCcceEEecccceEecCCCCCEEEEEEEECCccchHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999998 8999999999999999999999999999864
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=1.6e-118 Score=901.19 Aligned_cols=331 Identities=53% Similarity=0.878 Sum_probs=321.6
Q ss_pred cCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 66 ~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
.|++||||||||||||.++|+++++ +||||||||+.++++++|||||||+||+|+++++ .+++.|.|||+.|.+++
T Consensus 19 ~~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~-~~~~~l~i~Gk~I~v~~ 94 (356)
T 3hja_A 19 PGSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVE-SRDGAIVVDGREIKIIA 94 (356)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-EETTEEEETTEEEEEEC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEE-EcCCEEEECCEEEEEEE
Confidence 4579999999999999999999998 3999999999999999999999999999999999 89999999999999999
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCC----HhhHHHHHH-cCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCc
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVD----REGAGKHIQ-AGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASC 220 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~----~e~a~~hl~-aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSC 220 (442)
++||.+|||+++|+||||||||.|++ +|+|+.|++ +||||||||+|+++++||||||||++.|++.++|||||||
T Consensus 95 ~~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSC 174 (356)
T 3hja_A 95 ERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASC 174 (356)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCH
T ss_pred cCChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCcc
Confidence 99999999999999999999999999 999999999 9999999999999878999999999999988899999999
Q ss_pred hhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchh
Q 013492 221 TTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHR 300 (442)
Q Consensus 221 TTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~ 300 (442)
|||||+|++|+||++|| |++|+|||||+|||+|+++|.+|+
T Consensus 175 TTn~Lap~lkvL~d~fG---------------------------------------I~~g~mTTvhA~T~~Q~~~D~p~k 215 (356)
T 3hja_A 175 TTNCLAPLAKVLHESFG---------------------------------------IEQGLMTTVHAYTNDQRILDLPHS 215 (356)
T ss_dssp HHHHHHHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCS
T ss_pred chhhhhHhHHHHHHhcC---------------------------------------eEEEEEEEEEecccccccccCccc
Confidence 99999999999999999 999999999999999999998889
Q ss_pred hhhhhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEE-ccCCCHHHHHHHHHhccccc-CCC
Q 013492 301 DLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQV-SKKTFAEEVNAAFRESADNE-LKG 378 (442)
Q Consensus 301 d~rr~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l-~k~~~~eeV~~a~~~aa~~~-lkg 378 (442)
||||+|++++||||++||++|+++||||+|+|||+|+|+||||+++|++||++++ +|++++|||+++|+++++++ |||
T Consensus 216 d~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~~~s~~dlt~~l~ek~~t~eeI~~~lk~Aa~g~~lkg 295 (356)
T 3hja_A 216 DLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELKG 295 (356)
T ss_dssp STTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESCTTCCHHHHHHHHHHHHHSTTTTT
T ss_pred ccccccccccEEEcCCCchHHHHHHhccccCCcEEEEEEEcCCCccEeEEEEEEEccCCCCHHHHHHHHHHHhcCchhcc
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999999999999 999
Q ss_pred ceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhh
Q 013492 379 ILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 439 (442)
Q Consensus 379 il~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~ 439 (442)
||+|+|+|+||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|++
T Consensus 296 il~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 296 ILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEEEEEEEECTTHHHHHHHHHHHHHHC-
T ss_pred ccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEEEEEEEECCccchHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999864
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.5e-116 Score=881.84 Aligned_cols=331 Identities=52% Similarity=0.837 Sum_probs=321.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC-CCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK-DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~-~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+||||||||||||+++|+++++. .++||||||||+.++++++|||+|||+||+|+++++ .+++.|.++|+.|.+++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~-~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVS-VNGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-EETTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEE-EeCCEEEECCEEEEEEEcC
Confidence 79999999999999999999871 135999999999999999999999999999999999 7899999999999999999
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC-ceeeccCccCCCCCCCeEecCCchhhhhH
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLA 226 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p-t~V~gVN~~~y~~~~~IISnaSCTTn~La 226 (442)
||.++||+++|+||||||||.|+++++|+.|+++||||||||+|+++|+| |||||||++.|++.++||||||||||||+
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~La 160 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCLA 160 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999986799 99999999999977789999999999999
Q ss_pred HHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhh
Q 013492 227 PFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRAR 306 (442)
Q Consensus 227 p~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~r 306 (442)
|++|+||++|| |++|+|||||||||+|+++|.+|+||||+|
T Consensus 161 p~lk~L~d~fG---------------------------------------I~~~~mTTvha~T~~q~~~d~~~~d~r~~r 201 (335)
T 1obf_O 161 PLVKPLNDKLG---------------------------------------LQDGLMTTVHAYTNNQVLTDVYHEDLRRAR 201 (335)
T ss_dssp HHHHHHHHHTC---------------------------------------EEEEEEEEEEECCTTSCSSCCCCSSTTTTS
T ss_pred HHHHHHHHhcC---------------------------------------eeEEEEEEEchhhhhhhhhccccccccccc
Confidence 99999999999 999999999999999999998899999999
Q ss_pred ccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCC
Q 013492 307 AAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP 386 (442)
Q Consensus 307 aaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~ 386 (442)
++++||||++||++|+++||||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|+|||
T Consensus 202 ~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~~s~~dl~v~lek~~t~eei~~~lk~a~~~~lkgil~y~~~~ 281 (335)
T 1obf_O 202 SATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPTINVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYNTEP 281 (335)
T ss_dssp CTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSC
T ss_pred chhhccccCCCcchHhHhhhccccCCceEEEEEEeeccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCeecccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 387 LVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 387 ~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
+||+||+|++||||||+.+|++ +++|+|+++||||||||||||+||+.+|+++
T Consensus 282 ~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDNE~gys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 282 LVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDNEWGFSNRMLDTTVALMSA 334 (335)
T ss_dssp CCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred eEeeeeCCCCccceeccccccc-cCCEEEEEEEeCCCcchHhHHHHHHHHHhcc
Confidence 9999999999999999999999 9999999999999999999999999999764
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=6.7e-116 Score=880.05 Aligned_cols=331 Identities=47% Similarity=0.782 Sum_probs=321.7
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
.++||||||||||||+++|++++++ +||||+||| +.++++++|||||||+||+|+++++ .+++.|.++|+.|.+++
T Consensus 10 ~~~kv~INGfGrIGr~v~ra~~~~~--~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~-~~~~~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 10 AATKLGINGFGRIGRLVFRAAFGRK--DIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVT-HADGFLLIGEKKVSVFA 86 (345)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEESSCEEEEEC
T ss_pred hheEEEEeCCchHHHHHHHHHhhCC--CcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEE-EcCCEEEECCEEEEEEE
Confidence 3689999999999999999999874 599999999 8899999999999999999999999 78999999999999999
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhh
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 225 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~L 225 (442)
++||.++||+++|+||||||||.|+++|+|+.|+++||||||||+|+++++||||||||++.|++.++||||||||||||
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 99999999999999999999999999999999999999999999999977899999999999997778999999999999
Q ss_pred HHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccch---hhh
Q 013492 226 APFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASH---RDL 302 (442)
Q Consensus 226 ap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h---~d~ 302 (442)
+|++|+||++|| |++|+|||||+|||+|+++|.+| +||
T Consensus 167 ap~lk~L~d~fG---------------------------------------I~~~~mTTvhA~T~~q~~~d~~~~~~~d~ 207 (345)
T 2b4r_O 167 APLAKVINDRFG---------------------------------------IVEGLMTTVHASTANQLVVDGPSKGGKDW 207 (345)
T ss_dssp HHHHHHHHHHHC---------------------------------------EEEEEEEEEECCCTTSCSSSCCCGGGCCG
T ss_pred HHHHHHHHHhcC---------------------------------------eeEEEEEEeehhhchhhhhcccccccCCC
Confidence 999999999999 99999999999999999999777 899
Q ss_pred hhhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceee
Q 013492 303 RRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSV 382 (442)
Q Consensus 303 rr~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~ 382 (442)
||+|++++||||++||++|++++|||+|+|||+|+|+||||+++|++||+++++|++++|||+++|+++++++|||||+|
T Consensus 208 r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~gs~~dltv~lek~~t~eei~~~lk~a~~~~lkgil~y 287 (345)
T 2b4r_O 208 RAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGY 287 (345)
T ss_dssp GGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEE
T ss_pred ccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEEecccceEEEEEEEEECCCCCHHHHHHHHHHhhhcccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhh
Q 013492 383 CDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 439 (442)
Q Consensus 383 ~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~ 439 (442)
+|+|+||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|++
T Consensus 288 ~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~WyDNE~gys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 288 TEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT 344 (345)
T ss_dssp ECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHC
T ss_pred cCCCceEEeeCCCCcccccccccCeEecCCEEEEEEEeCCCcchHhHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999964
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=8.5e-116 Score=878.49 Aligned_cols=331 Identities=57% Similarity=0.929 Sum_probs=320.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||||||||||+++|++++++ +||||||||+.++++++|||+|||+||+|+++++ .+++.|.++|+.|.++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~~--~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~-~~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGRE--EIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVE-AKDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTCT--TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-ECSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhCC--CceEEEEecCCChHHHhhhhhcccccccCCCcEE-EcCCEEEECCEEEEEEEc
Confidence 5689999999999999999999874 5999999999899999999999999999999999 889999999999999999
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC-ceeeccCccCCCC-CCCeEecCCchhhh
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKP-DEPIISNASCTTNC 224 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p-t~V~gVN~~~y~~-~~~IISnaSCTTn~ 224 (442)
++|.++||+++|+||||||||.|+++|+|+.|+++||||||||+|++ |+| |||||||++.|++ .++|||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~-dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~ 156 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK-NPDITVVLGVNEEKYNPKEHNIISNASCTTNC 156 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB-SCSEECCTTTSGGGCCTTTCCEEECCCHHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC-CCCceEEcCcCHHHhcccCCeEEECCChHHHH
Confidence 99999999999999999999999999999999999999999999998 589 9999999999997 57899999999999
Q ss_pred hHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhh
Q 013492 225 LAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRR 304 (442)
Q Consensus 225 Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr 304 (442)
|+|++|+||++|| |++|+|||||+|||+|+++|.+|+||||
T Consensus 157 Lap~lk~L~d~fG---------------------------------------I~~~~mTTvha~T~~q~~~d~p~~d~r~ 197 (342)
T 2ep7_A 157 LAPCVKVLNEAFG---------------------------------------VEKGYMVTVHAYTNDQRLLDLPHKDFRR 197 (342)
T ss_dssp HHHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCSSTTT
T ss_pred HHHHHHHHHHHcC---------------------------------------eeEEEEEEEeecccchhhhcCCcchhhh
Confidence 9999999999999 9999999999999999999988999999
Q ss_pred hhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEcc-CCCHHHHHHHHHhcccc-------cC
Q 013492 305 ARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSK-KTFAEEVNAAFRESADN-------EL 376 (442)
Q Consensus 305 ~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k-~~~~eeV~~a~~~aa~~-------~l 376 (442)
+|++++||||++||++|++++|||+|+|||+|+|+||||+++|++||+++++| ++++|||+++|++++++ +|
T Consensus 198 ~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv~~~s~~dltv~lek~~~t~eei~~~lk~a~~~~~~~~~~~l 277 (342)
T 2ep7_A 198 ARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYL 277 (342)
T ss_dssp TSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCSCHHHHHHHHHHHHHHHHTSCCGGG
T ss_pred hhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEecccceEEEEEEEEEcCCCCCHHHHHHHHHHHhcCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999 99
Q ss_pred CCceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhcC
Q 013492 377 KGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 441 (442)
Q Consensus 377 kgil~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~~ 441 (442)
||||+|+|||+||+||++++||||||+.+|+++ ++|+|+++||||||||||||+||+.+|+++|
T Consensus 278 kgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~vk~~~wyDNE~gys~r~~dl~~~~~~~~ 341 (342)
T 2ep7_A 278 KEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNLVHIAAWYDNEWGYSCRLRDLVIYLAERG 341 (342)
T ss_dssp TTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHHHHHHHHHHHHHHHC-
T ss_pred cccccccCCCeEeeeECCCCccceecccccccc-CCEEEEEEEECCCccchhHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999 8899999999999999999999999999876
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.7e-109 Score=828.87 Aligned_cols=328 Identities=53% Similarity=0.852 Sum_probs=319.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
+||||||||||||+++|+++++ +||||+|||+.++++++|||+|||+||+|.++++ .+++.|.++|+.|.+++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVA-YDDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEE-ECSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHHHHhHhhhccccCCCCCceEE-EcCCEEEECCEEEEEEecCC
Confidence 5899999999999999999987 3999999999999999999999999999999999 78889999999999999899
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCC-CCCeEecCCchhhhhHH
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAP 227 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~-~~~IISnaSCTTn~Lap 227 (442)
|.++||+++|+|+||||||.|++++.+++|+++||||||||+|+++++|++|+|||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999876899999999999996 47899999999999999
Q ss_pred HHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhhc
Q 013492 228 FVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRARA 307 (442)
Q Consensus 228 ~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~ra 307 (442)
++|+||++|| |++|.|||+|++||+|+++|.+|+||||+|+
T Consensus 157 ~lk~L~~~fg---------------------------------------I~~~~mtTvha~Tg~q~~~d~~~~d~r~~r~ 197 (331)
T 2g82_O 157 VMKVLEEAFG---------------------------------------VEKALMTTVHSYTNDQRLLDLPHKDLRRARA 197 (331)
T ss_dssp HHHHHHHHTC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCSSTTTTSB
T ss_pred HHHHHHHhcC---------------------------------------ccEEEEEEEeecccccchhccccccccccch
Confidence 9999999999 9999999999999999999988999999999
Q ss_pred cccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCCe
Q 013492 308 AALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPL 387 (442)
Q Consensus 308 aa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~ 387 (442)
+++||||++||++|++++|+|+|+|||+|+|+||||++||++||+++++|++++|||+++|+++++++|||||+|+|+|+
T Consensus 198 ~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~gs~~dl~v~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~ 277 (331)
T 2g82_O 198 AAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEI 277 (331)
T ss_dssp GGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCC
T ss_pred hhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCCEEEEEEEEEECCCCCHHHHHHHHHHhhcCccCCccCCCCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 388 VSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 388 VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
||+||+|++||||||+.+|+++ ++|+|+++||||||||||||+||+.+|+++
T Consensus 278 vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~gys~r~~d~~~~~~~~ 329 (331)
T 2g82_O 278 VLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEWGYANRVADLVELVLRK 329 (331)
T ss_dssp CGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred eeeeeCCCCccceecchhcccc-CCEEEEEEEECCCchhHHHHHHHHHHHHhc
Confidence 9999999999999999999999 889999999999999999999999999875
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.2e-108 Score=836.38 Aligned_cols=335 Identities=69% Similarity=1.070 Sum_probs=323.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||||||||||.++|+|.++..+++|||+|||+.++++++|||+|||+||+|.++++ .+++.|.++|+.|.++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADIS-YDENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEE-EETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEE-EeCCeEEECCeEEEEEec
Confidence 5689999999999999999999873246999999999899999999999999999999999 788999999999999999
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC-ceeeccCccCCCCC-CCeEecCCchhhh
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPD-EPIISNASCTTNC 224 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p-t~V~gVN~~~y~~~-~~IISnaSCTTn~ 224 (442)
+||.+++|+++|+|+||||||.|.+++.+++|+++||||||||+|+++++| ++|||||++.|++. ++|||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn~ 159 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHHH
Confidence 999999999999999999999999999999999999999999999986678 99999999999974 7899999999999
Q ss_pred hHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhh
Q 013492 225 LAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRR 304 (442)
Q Consensus 225 Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr 304 (442)
|+|++|+||++|| |++|+|||+|+|||+|+++|.+|+||||
T Consensus 160 lap~lk~L~d~fg---------------------------------------I~~g~mTTvha~Tg~q~~vD~~~~d~r~ 200 (380)
T 2d2i_A 160 LAPVAKVLHDNFG---------------------------------------IIKGTMTTTHSYTLDQRILDASHRDLRR 200 (380)
T ss_dssp HHHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSCSSSCCCSSTTT
T ss_pred HHHHHHHHHHhcC---------------------------------------eeEEEEEEEeeccccchhhccchhhhhh
Confidence 9999999999999 9999999999999999999999999999
Q ss_pred hhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeecc
Q 013492 305 ARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCD 384 (442)
Q Consensus 305 ~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~ 384 (442)
+|++++||||++||++|++++|||||+|||+|+|+||||++||++||+++++|++++|||+++|+++++++|||||+|+|
T Consensus 201 gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVPt~~gs~~dlt~~l~k~~t~eeI~~~lk~a~~~~lkgil~y~~ 280 (380)
T 2d2i_A 201 ARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSD 280 (380)
T ss_dssp TSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEEC
T ss_pred cchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEeccCCEEEEEEEEEECCcCCHHHHHHHHHHHhhCCCCCccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhcC
Q 013492 385 EPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 441 (442)
Q Consensus 385 ~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~~ 441 (442)
+|+||+||++++||||||+.+|++++++|+|+++||||||||||||+||+.+|+++|
T Consensus 281 ~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyDNe~gys~r~~d~~~~~~~~~ 337 (380)
T 2d2i_A 281 LPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKS 337 (380)
T ss_dssp SCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHTTC
T ss_pred CCeeeeeeCCCCcceEEecccCceecCCEEEEEEEECCCcchHhHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999998864
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=4.7e-108 Score=820.35 Aligned_cols=336 Identities=91% Similarity=1.376 Sum_probs=323.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||||||||||.++|+|+++..+++|||+|||+.++++++|||+|||+||+|.++++..+++.|.++|+.|.+++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 47999999999999999999988435699999999999999999999999999999998844567899999999999999
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhhHH
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAP 227 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~Lap 227 (442)
||.++||+++|+|+||||||.|++++.+++|+++|+|+|++|+|.++++|++|||||++.|++.++||||||||||||+|
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~lap 160 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAP 160 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHHH
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999986679999999999999768999999999999999
Q ss_pred HHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhhc
Q 013492 228 FVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRARA 307 (442)
Q Consensus 228 ~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~ra 307 (442)
++|+||++|| |++|.|||+|++||+|+++|.+|+||||+|+
T Consensus 161 ~lk~L~~~fg---------------------------------------I~~~~mtTvha~Tgaq~l~d~~~~~~r~~r~ 201 (337)
T 1rm4_O 161 FVKVLDQKFG---------------------------------------IIKGTMTTTHSYTGDQRLLDASHRDLRRARA 201 (337)
T ss_dssp HHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSCSSSCCCSSTTTTSC
T ss_pred HHHHHHHhcC---------------------------------------eeEEEEEEEEecCCccchhhcchhhhccchh
Confidence 9999999999 9999999999999999999999999999999
Q ss_pred cccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCCe
Q 013492 308 AALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPL 387 (442)
Q Consensus 308 aa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~ 387 (442)
+++||||++||++|++++|+|||+|||+|+|+||||++||++||+++++|++++|||+++|+++++++|||||+|+|+|+
T Consensus 202 ~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~~gs~~dl~~~l~k~~t~eei~~~lk~a~~~~lkgil~y~~~~~ 281 (337)
T 1rm4_O 202 ACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPL 281 (337)
T ss_dssp TTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCC
T ss_pred hhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCcCceecCcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhcCC
Q 013492 388 VSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 442 (442)
Q Consensus 388 VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~~~ 442 (442)
||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|+++|+
T Consensus 282 vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~~~ 336 (337)
T 1rm4_O 282 VSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336 (337)
T ss_dssp CGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHTCC
T ss_pred eecccCCCCcccccchhccceecCCEEEEEEEECCCccchhhHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999998753
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.3e-107 Score=816.80 Aligned_cols=336 Identities=69% Similarity=1.090 Sum_probs=324.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||||||||||.++|+|.++..++||||+|||..++++++|||+|||+||+|.++++ .+++.|.++|+.|.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADIS-YDENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEE-EETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEE-EcCCeeeecCceEEEEec
Confidence 5689999999999999999999873246999999999999999999999999999999999 788899999999999999
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC-ceeeccCccCCCCC-CCeEecCCchhhh
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPD-EPIISNASCTTNC 224 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p-t~V~gVN~~~y~~~-~~IISnaSCTTn~ 224 (442)
+||.+++|++.++|+||||||.|++++.+++|+++|+||||||+|+++++| ++|+|||++.|++. ++|||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn~ 159 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNC 159 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhhH
Confidence 999999999999999999999999999999999999999999999986678 99999999999974 7899999999999
Q ss_pred hHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhh
Q 013492 225 LAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRR 304 (442)
Q Consensus 225 Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr 304 (442)
|+|++|+||++|| |++|+|||+|+|||+|+++|.+|+||||
T Consensus 160 lap~lk~L~~~fg---------------------------------------I~~~~~tTvha~Tg~q~~vd~~~~d~r~ 200 (339)
T 3b1j_A 160 LAPVAKVLHDNFG---------------------------------------IIKGTMTTTHSYTLDQRILDASHRDLRR 200 (339)
T ss_dssp HHHHHHHHHHHTC---------------------------------------EEEEEEEEEEECCTTSCSSSCCCSSTTT
T ss_pred HHHHHHHHHHhCC---------------------------------------eeEEEEEEEEeecCCchhcccchhhhhc
Confidence 9999999999999 9999999999999999999999999999
Q ss_pred hhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeecc
Q 013492 305 ARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCD 384 (442)
Q Consensus 305 ~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~ 384 (442)
+|++++||||++||++|++.+|+|+|+|||+|+|+||||+++|++|++++++|++++|||+++|+++++++|||||+|+|
T Consensus 201 ~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP~~~g~~~dl~v~l~k~~t~eeI~~~lk~a~~~~l~gil~y~~ 280 (339)
T 3b1j_A 201 ARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKYSD 280 (339)
T ss_dssp TSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHSTTBTTEEEEC
T ss_pred cccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEeccCCEEEEEEEEEEcCcCCHHHHHHHHHHhhcCCCCCccCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhcCC
Q 013492 385 EPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 442 (442)
Q Consensus 385 ~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~~~ 442 (442)
||+||+||+|++|||+||+.+|++++++|+|+++||||||||||||+||+.+|+++|.
T Consensus 281 ~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~~~ 338 (339)
T 3b1j_A 281 LPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKWA 338 (339)
T ss_dssp SCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHTCC
T ss_pred CceeehhcCCCCCceEEecccCceecCCEEEEEEEeCCCcchHhHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999999998753
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=7.2e-106 Score=802.83 Aligned_cols=330 Identities=60% Similarity=0.940 Sum_probs=320.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
+||||||||||||.++|++.+++ ++|||+|||..++++++|||+|||+||+|.++++ .+++.|.++|+.|.+++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~--~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~-~~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNP--DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS-VNGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCT--TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEE-EETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCC--CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEE-EccCcEEECCEEEEEEecCC
Confidence 79999999999999999999874 5999999998899999999999999999999999 78899999999999998899
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCC-CCCeEecCCchhhhhHH
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAP 227 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~-~~~IISnaSCTTn~Lap 227 (442)
|.++||+++++|+||||||.|++++.++.|+++|+||||||+|++++.|++|+|||++.|++ ..+||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999865799999999999986 37899999999999999
Q ss_pred HHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhhc
Q 013492 228 FVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRARA 307 (442)
Q Consensus 228 ~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~ra 307 (442)
++|+||++|| |+++.|||+|++||+|+++|.+|+|||++|+
T Consensus 159 ~lkpL~~~~g---------------------------------------I~~~~mtTvha~Sg~q~~~d~~~~~~r~~r~ 199 (334)
T 3cmc_O 159 FAKVLHEQFG---------------------------------------IVRGMMTTVHSYTNDQRILDLPHKDLRRARA 199 (334)
T ss_dssp HHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCSSTTTTSB
T ss_pred HHHHHHHhcC---------------------------------------ceeeeEEEEEeccchhhhccccccccccchh
Confidence 9999999999 9999999999999999999988999999999
Q ss_pred cccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCCe
Q 013492 308 AALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPL 387 (442)
Q Consensus 308 aa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~ 387 (442)
+++||||++||++|+++++||+|+|||+++|+||||++||++|++++++|++++|||+++|+++++++|||||+|+|+|+
T Consensus 200 ~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~gs~~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~ 279 (334)
T 3cmc_O 200 AAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPL 279 (334)
T ss_dssp TTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCC
T ss_pred hhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCccCCcccCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 388 VSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 388 VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
||+||++++||||||+.+|++++++|+|+++||||||||||||+||+.+|+++
T Consensus 280 vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 280 VSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK 332 (334)
T ss_dssp CGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTHHHHHHHHHHHHHHHHT
T ss_pred eeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCchhhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999875
No 17
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=3.6e-105 Score=804.21 Aligned_cols=335 Identities=48% Similarity=0.783 Sum_probs=318.9
Q ss_pred cccCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEE
Q 013492 64 AAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQ 142 (442)
Q Consensus 64 ~~~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~ 142 (442)
...+++||||||||||||.++|+|.+++ ++|||+||| ..++++++|||+|||+||+|.++++ .+++.|.++|+.|.
T Consensus 13 ~~~~~ikVgI~G~G~iGr~llR~l~~~p--~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~-~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 13 NLYFQGTLGINGFGRIGRLVLRACMERN--DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVE-VSGKDLCINGKVVK 89 (354)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHTCS--SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEE-ECC-CEEETTEEEE
T ss_pred CcCcceEEEEECCCHHHHHHHHHHHcCC--CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEE-EeCCEEEECCeEEE
Confidence 4445689999999999999999999874 599999999 8899999999999999999999998 78899999999999
Q ss_pred EEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCC-CCeEecCCch
Q 013492 143 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCT 221 (442)
Q Consensus 143 v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~-~~IISnaSCT 221 (442)
+++++||.+++|++.++|+||||||.|++++.+++|+++|+||||||+|+++++|++|||||++.|++. .+||||||||
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCt 169 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCT 169 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHH
T ss_pred EEecCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcH
Confidence 999999999999989999999999999999999999999999999999998668999999999999975 7899999999
Q ss_pred hhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccch--
Q 013492 222 TNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASH-- 299 (442)
Q Consensus 222 Tn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h-- 299 (442)
||||+|++|+|+++|| |+++.|||+|++||+|+++|.+|
T Consensus 170 Tn~lap~lkpL~~~~g---------------------------------------I~~g~mtTvha~Tg~q~~vd~~~~~ 210 (354)
T 3cps_A 170 TNCLAPLAKIINDKFG---------------------------------------IVEGLMTTVHSLTANQLTVDGPSKG 210 (354)
T ss_dssp HHHHHHHHHHHHHHTC---------------------------------------EEEEEEEEEEECCTTSCSSSCCCCC
T ss_pred HHHHHHHHHHHHHhCC---------------------------------------eeEEEEEEEecccccchhhhccchh
Confidence 9999999999999999 99999999999999999999888
Q ss_pred -hhhhhhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCC
Q 013492 300 -RDLRRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKG 378 (442)
Q Consensus 300 -~d~rr~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkg 378 (442)
+|||++|++++||||++||++|+++++||+|+|||+++++||||++||++||+++++|++++|||+++|+++++++|||
T Consensus 211 ~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a~rVP~~~gs~~dl~~~l~k~~t~eeI~~~~k~a~~~~lkg 290 (354)
T 3cps_A 211 GKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKG 290 (354)
T ss_dssp --CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTT
T ss_pred ccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEEEEeccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 379 ILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 379 il~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
||+|+|+|+||+||++++||||||+.+|++++++|+|+++||||||||||||+||+.+|+++
T Consensus 291 il~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 291 IMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVASR 352 (354)
T ss_dssp TEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHT
T ss_pred ccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEEEEECCCcchHhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999865
No 18
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.1e-104 Score=791.76 Aligned_cols=330 Identities=56% Similarity=0.873 Sum_probs=318.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
+||||||||||||+++|+|.++..+++|||+|||..++++++|||+|||+||+|.++++ .+++.|.++|+.+.+++++|
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~-~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVE-YTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEE-ECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEE-EcCCEEEECCeEEEEEecCC
Confidence 58999999999999999999872235999999998899999999999999999999999 78899999999999998899
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC-ceeeccCccCCCCCCCeEecCCchhhhhHH
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAP 227 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p-t~V~gVN~~~y~~~~~IISnaSCTTn~Lap 227 (442)
|.++||+++++|+||||||.|++++.+++|+++|+||||||+|++ +.| ++|+|||++.|++..+||||||||||||+|
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~-d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap 158 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK-GEDITVVIGCNEDQLKPEHTIISCASCTTNSIAP 158 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB-SCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC-CCCceEEeccCHHHhCCCCcEEECCccHHHHHHH
Confidence 999999999999999999999999999999999999999999997 589 999999999998667899999999999999
Q ss_pred HHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhhhhhhc
Q 013492 228 FVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDLRRARA 307 (442)
Q Consensus 228 ~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~rr~ra 307 (442)
++|+|+++|| |+++.|||+|++||+|+++|.+|+|||++|+
T Consensus 159 ~lkpL~~~~g---------------------------------------I~~~~~ttvha~Sg~q~~~d~~~~~~~~~r~ 199 (332)
T 1hdg_O 159 IVKVLHEKFG---------------------------------------IVSGMLTTVHSYTNDQRVLDLPHKDLRRARA 199 (332)
T ss_dssp HHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCSSTTTTSB
T ss_pred HHHHHHHhcC---------------------------------------eeEeEEEEEEeccchhhhhcCcccccccchh
Confidence 9999999999 9999999999999999999988999999999
Q ss_pred cccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCCe
Q 013492 308 AALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPL 387 (442)
Q Consensus 308 aa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~ 387 (442)
+++||||++||++|+++++||+|+|||+++|+||||++||++|++++++|++++|||+++|+++++++|||||+|+|+|+
T Consensus 200 ~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~~g~l~~l~~~l~k~~t~eei~~~lk~a~~~~l~gil~y~~~~~ 279 (332)
T 1hdg_O 200 AAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYNDEPI 279 (332)
T ss_dssp GGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHTTTTTTTEEEECSCC
T ss_pred HhhCcccccCCcccchhhhCccccCCEEEEeEEccccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcccCCcccccCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhh
Q 013492 388 VSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 439 (442)
Q Consensus 388 VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~ 439 (442)
||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|++
T Consensus 280 vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~ 331 (332)
T 1hdg_O 280 VSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELLLK 331 (332)
T ss_dssp CGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTTHHHHHHHHHHHHHGGG
T ss_pred eeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCccchhHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999965
No 19
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=4.7e-104 Score=788.25 Aligned_cols=327 Identities=49% Similarity=0.811 Sum_probs=318.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
+||||||||||||+++|++.+++ ++|||+|||..++++++||++|||+||+|.+.++ .+++.|.++|+.|.+++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~--~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~-~~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRS--DIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVE-VKDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCC--CeEEEEEcCCCChhHHhHhhcccccCCCCCCeEE-EcCCEEEECCEEEEEEEcCC
Confidence 79999999999999999999875 5999999998899999999999999999999999 78899999999999999999
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhhHHH
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPF 228 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~Lap~ 228 (442)
|.++||++.++|+||||||.|++++.++.|+++|+|+|++|+|.+++.|++|||||++.|+ ..+||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999976789999999999998 578999999999999999
Q ss_pred HHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccch-hhhhhhhc
Q 013492 229 VKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARA 307 (442)
Q Consensus 229 lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h-~d~rr~ra 307 (442)
+|+||++|| |+++.|||+|++||+|+++|.+| +|||++|+
T Consensus 158 lkpL~~~~g---------------------------------------I~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~ 198 (330)
T 1gad_O 158 AKVINDNFG---------------------------------------IIEGLMTTVHATTATQKTVDGPSHKDWRGGRG 198 (330)
T ss_dssp HHHHHHHHC---------------------------------------EEEEEEEEEECCCTTSBSSSCCCSSCGGGGSB
T ss_pred HHHHHHhcC---------------------------------------eeEEEEEEEEecccccccccccccCCCccccc
Confidence 999999999 99999999999999999999887 79999999
Q ss_pred cccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCCe
Q 013492 308 AALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPL 387 (442)
Q Consensus 308 aa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~ 387 (442)
+++||||++||++|+++++||+|+|||+++|+||||++||++|++++++|++++|||+++|+++++++|||||+|+|+|+
T Consensus 199 ~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~~~l~~~l~k~~t~eei~~~~k~a~~~~l~gil~y~~~~~ 278 (330)
T 1gad_O 199 ASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDV 278 (330)
T ss_dssp TTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEECSCC
T ss_pred hhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccccEEEEEEEEEECCCCCHHHHHHHHHHHhcCCCCCEEeeECCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHh
Q 013492 388 VSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 438 (442)
Q Consensus 388 VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~ 438 (442)
||+||+|++||||||+.+|++++++|+|+++||||||||||||+||+.+|+
T Consensus 279 vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~ 329 (330)
T 1gad_O 279 VSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHIS 329 (330)
T ss_dssp CGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHTT
T ss_pred eeeeECCCCcceEEecccCeEecCCEEEEEEEECCCchhhhHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999985
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=4.7e-104 Score=790.73 Aligned_cols=332 Identities=44% Similarity=0.728 Sum_probs=309.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHh---CCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~---~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
|++||||||||+|||.++|+|.+ ++ ++|||+|||..++++++|||+|||+||+|.++++ .+++.|.++|+.|.+
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~--~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~-~~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRA--EITVVAINELADAAGMAHLLKYDTSHGRFAWEVR-QERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGG--TEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCC--CEEEEEEeCCCCHHHHHHHhcccccCCCCCceEE-EcCCeeEECCEEEEE
Confidence 56899999999999999999998 64 5999999998899999999999999999999999 788999999999999
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC-ceeeccCccCCCCCCCeEecCCchh
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTT 222 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p-t~V~gVN~~~y~~~~~IISnaSCTT 222 (442)
++++||.+++|+++++|+||||||.|.+++.++.|+++|+||||||+|+..++| ++|+|||++.|++..+|||||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCtt 157 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTT 157 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHH
Confidence 988999999999889999999999999999999999999999999999933688 9999999999997578999999999
Q ss_pred hhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhh
Q 013492 223 NCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDL 302 (442)
Q Consensus 223 n~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~ 302 (442)
|||+|++|+||++|| |+++.|||+|++||+|+++|.+|+||
T Consensus 158 n~lap~lkpL~~~~g---------------------------------------I~~~~~ttvha~Tg~q~~~d~~~~d~ 198 (339)
T 2x5j_O 158 NCIIPVIKLLDDAYG---------------------------------------IESGTVTTIHSAMHDQQVIDAYHPDL 198 (339)
T ss_dssp HHHHHHHHHHHHHHC---------------------------------------EEEEEEEEEECCC-----------CT
T ss_pred HHHHHHHHHHHHccC---------------------------------------cceeeEEEEEeccccccccccccccc
Confidence 999999999999999 99999999999999999999999999
Q ss_pred hhhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceee
Q 013492 303 RRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSV 382 (442)
Q Consensus 303 rr~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~ 382 (442)
||+|++++||||++||++|++++|||+|+|||+|+++||||+++|++|++++++|++++|||+++|+++++++|||||+|
T Consensus 199 r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~g~~~~l~v~l~k~~t~eei~~~lk~a~~~~l~gil~y 278 (339)
T 2x5j_O 199 RRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDY 278 (339)
T ss_dssp TTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEEECSSCSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEE
T ss_pred cchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEEEecccCcEEEEEEEEECCCCCHHHHHHHHHHHhhcCCCcEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 383 CDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 383 ~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
+|||+||+||++++|||+||+.+|++++++|+|+++||||||||||||+||+.+|+++
T Consensus 279 ~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~d~~~~~~~~ 336 (339)
T 2x5j_O 279 TELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATV 336 (339)
T ss_dssp ECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEEEECHHHHHHHHHHHHHHHHHCC
T ss_pred cCCcccccccCCCCCceEEEcccceeccCCEEEEEEEeCCCcccHhHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999764
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=2.1e-103 Score=785.09 Aligned_cols=331 Identities=47% Similarity=0.798 Sum_probs=319.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCC-cceeee-cCCcEEECCEEEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFE-ADVKPV-GTDGISVDGKVIQV 143 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~-~~v~~~-~~~~i~v~Gk~I~v 143 (442)
|++||||||||||||.++|++.+++ ++|||+||| ..++++++|||+|||+||+|. +.++ . +++.|.++|+.|.+
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p--~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~-~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSE--DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIK-IKDSKTLLLGEKPVTV 78 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCS--SEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEE-ESSSSEEEETTEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCCC--CeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEE-eecCCeeEECCeEEEE
Confidence 5589999999999999999999874 599999999 579999999999999999999 9988 5 78889999999999
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhh
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTN 223 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn 223 (442)
++++||.++||++.++|+||||||.|.+++.+++|+++|+|||||++|++ +.|++|||||++.|++..+||||||||||
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~-d~p~~V~gvN~~~~~~~~~iIsnpsCtt~ 157 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTN 157 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS-SSCBCCTTTTGGGCCTTCCEEECCCHHHH
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC-CCCEEEeccCHHHhCCCCcEEECCChHHH
Confidence 99999999999989999999999999999999999999999999999997 58999999999999876789999999999
Q ss_pred hhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccch-hhh
Q 013492 224 CLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASH-RDL 302 (442)
Q Consensus 224 ~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h-~d~ 302 (442)
||+|++|+|+++|| |+++.|||+|++||+|+++|.+| +||
T Consensus 158 ~la~~lkpL~~~~g---------------------------------------I~~~~~ttvha~Tg~q~~vd~~~~~~~ 198 (337)
T 3e5r_O 158 CLAPLAKVIHDNFG---------------------------------------IIEGLMTTVHAITATQKTVDGPSSKDW 198 (337)
T ss_dssp HHHHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCTTCS
T ss_pred HHHHHHHHHHHhcC---------------------------------------ccccceeEEEeeccccccccccccccc
Confidence 99999999999999 99999999999999999999877 699
Q ss_pred hhhhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceee
Q 013492 303 RRARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSV 382 (442)
Q Consensus 303 rr~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~ 382 (442)
|++|++++||||++||++|+++++||+|+|||+|+++||||++||++|++++++|++++|||+++|+++++++|||||+|
T Consensus 199 ~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~~~l~~~l~k~~t~eei~~~~~~a~~~~l~gil~y 278 (337)
T 3e5r_O 199 RGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGY 278 (337)
T ss_dssp GGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEE
T ss_pred cccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEEeccCCeEEEEEEEEECCCccHHHHHHHHHHHhhCCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 383 CDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 383 ~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
+|+|+||+||++++||||||+.+|++++++|+|+++||||||||||||+||+.+|+++
T Consensus 279 ~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 279 VEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp ECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred CCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEEeCCCcchHhHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999764
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=1.2e-102 Score=777.62 Aligned_cols=331 Identities=45% Similarity=0.766 Sum_probs=319.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||||||||||.++|++.+++ ++|||+||| ..++++++||++|||+||+|.+.++ .+++.|.++|+.|.+++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~--~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~-~~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSG--KVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVK-AENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC--SSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEE-EETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcCC--CcEEEEecCCCCCHHHHHHHhhcccccCCCCCceE-EcCCeEEECCeEEEEEe
Confidence 5689999999999999999998874 599999999 4899999999999999999999999 78899999999999999
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCCceeeccCccCCCCCCCeEecCCchhhhh
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 225 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~pt~V~gVN~~~y~~~~~IISnaSCTTn~L 225 (442)
++||.++||++.++|+||||||.|.+++.+++|+++|+|+|++|+|++ +.|++|||||++.|++..+||||||||||||
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~-~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l 157 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA-DAPMFVMGVNHEKYDNSLKIISNASCTTNCL 157 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS-SSCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC-CCCeEEeccCHHHhCCCCCEEECCChHHHHH
Confidence 999999999999999999999999999999999999999999999976 4899999999999987678999999999999
Q ss_pred HHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccch-hhhhh
Q 013492 226 APFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASH-RDLRR 304 (442)
Q Consensus 226 ap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h-~d~rr 304 (442)
+|++|+|+++|| |+++.|||+|++||+|+++|.+| +|||+
T Consensus 158 ~~~lkpL~~~~g---------------------------------------I~~~~~tt~~a~Tg~q~~vd~~~~~~~~~ 198 (335)
T 1u8f_O 158 APLAKVIHDNFG---------------------------------------IVEGLMTTVHAITATQKTVDGPSGKLWRD 198 (335)
T ss_dssp HHHHHHHHHHHC---------------------------------------EEEEEEEEEEECCTTSBSSSCCCTTCGGG
T ss_pred HHHHHHHHHhCC---------------------------------------cceeEEEEEeccccCcccccccccccccc
Confidence 999999999999 99999999999999999999888 89999
Q ss_pred hhccccceecCCCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeecc
Q 013492 305 ARAAALNIVPTSTGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCD 384 (442)
Q Consensus 305 ~raaa~NIIPtstGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~ 384 (442)
+|++++||||++||++|+++++||+|+|||+|+++||||++||++|++++++|++++|||+++|+++++++|||||+|+|
T Consensus 199 ~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~~g~~~~l~~~l~~~~t~eei~~~~~~a~~~~~~~il~~~~ 278 (335)
T 1u8f_O 199 GRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTE 278 (335)
T ss_dssp GSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHHHHHTTTTTTEEEEC
T ss_pred chhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEeccCCEEEEEEEEEECCCCCHHHHHHHHHHHhhCccCcEEcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCCcchhhhHhHHHHHHhhc
Q 013492 385 EPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 440 (442)
Q Consensus 385 ~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE~GYs~Rvvdl~~~~~~~ 440 (442)
+|+||+||+|++|||+||+.+|++++++++|+++||||||||||||+||+.+|+++
T Consensus 279 ~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~gy~~r~~~~~~~~~~~ 334 (335)
T 1u8f_O 279 HQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASK 334 (335)
T ss_dssp SCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEECTTHHHHHHHHHHHHHHHHT
T ss_pred CCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEEcCcchhHhHHHHHHHHHhcc
Confidence 99999999999999999999999998999999999999999999999999999764
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5e-61 Score=480.33 Aligned_cols=241 Identities=18% Similarity=0.258 Sum_probs=218.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccC--cccccC--Ccce-eeecCCcEEECCEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYD--STLGIF--EADV-KPVGTDGISVDGKVI 141 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyD--St~g~f--~~~v-~~~~~~~i~v~Gk~I 141 (442)
|++||||||||||||.++|++.+++ ++|||+|||. ++++++||++|| ++||+| ++++ + .+++.+.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~--~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~-~~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQD--DMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKL-FEDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSS--SEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHH-HHHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhCC--CceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeec-ccCCeEEECC---
Confidence 4589999999999999999999874 5999999997 599999999999 999999 5666 4 5667787877
Q ss_pred EEEecCCCCCCCCCCccccEEEcCCCCCCCHhhHH-HHHHcCCCeEEEeCCCCCC-CC-ceeeccCccCCCCCCCeEecC
Q 013492 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAG-KHIQAGAKKVLITAPGKGD-IP-TYVVGVNADAYKPDEPIISNA 218 (442)
Q Consensus 142 ~v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~-~hl~aGAkkVIIsapsk~d-~p-t~V~gVN~~~y~~~~~IISna 218 (442)
++..+.| ++|+||||||.+.+++.++ .|+++| ++||+++|+++| +| +||+|||++.|++ ++|||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~ 142 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVV 142 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEEC
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEecc
Confidence 3445556 8999999999999999996 999999 569999999755 89 9999999999986 7899999
Q ss_pred CchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccc
Q 013492 219 SCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDAS 298 (442)
Q Consensus 219 SCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~ 298 (442)
|||||||+|++|+||++|| |+++.|||||++||.
T Consensus 143 sCtT~~lap~lk~L~~~fg---------------------------------------I~~~~vtT~~a~sg~------- 176 (343)
T 2yyy_A 143 SCNTTGLCRILYAINSIAD---------------------------------------IKKARIVLVRRAADP------- 176 (343)
T ss_dssp CHHHHHHHHHHHHHHTTSE---------------------------------------EEEEEEEEEEESSCT-------
T ss_pred chhhHHHHHHHHHHHHHcC---------------------------------------ceEEEEEeeeeccCc-------
Confidence 9999999999999999999 999999999999992
Q ss_pred hhhhhhhhccccceecC----CCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccc
Q 013492 299 HRDLRRARAAALNIVPT----STGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADN 374 (442)
Q Consensus 299 h~d~rr~raaa~NIIPt----stGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~ 374 (442)
| |++|++++||||+ +||++|+++||+|+|+||++|+|+||||+++|++||++++++++++|||+++|++++..
T Consensus 177 ~---~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gkl~~~avRVPv~~gh~~~l~v~l~~~~t~eei~~~l~~a~~v 253 (343)
T 2yyy_A 177 N---DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGKILTSAVIVPTTLMHMHTLMVEVDGDVSRDDILEAIKKTPRI 253 (343)
T ss_dssp T---CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTSEEEEEEEESCSSCEEEEEEEEEESCCCHHHHHHHHHHSTTE
T ss_pred C---cchhhHHhcccCCCCCCCCcchHHHHHhhhccccceeeEEEEecccceEEEEEEEEECCCCCHHHHHHHHHhCCCC
Confidence 2 5678999999999 99999999999999999999999999999999999999999999999999999999775
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-49 Score=391.89 Aligned_cols=291 Identities=21% Similarity=0.289 Sum_probs=233.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+|||||| ||+|||.++|.|.++. ++++.++ ++. | .+ ..++.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~---~~~~~l~----------~~~--s--------~~-~~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN---FPLSELR----------LYA--S--------PR-SAGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT---CCCSCCE----------EEE--C--------GG-GSSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCcEEEE----------Eee--c--------cc-cCCCEEEEcCceEEEEeC-
Confidence 4899999 9999999999999764 3332222 221 1 12 456778899999999875
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCCCCCeEecCCchhh
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPDEPIISNASCTTN 223 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~~~~IISnaSCTTn 223 (442)
+|. +| ++|+||+|||.|.+++.++.|+++|+ ++|++++. ++.|++|+|||++.|+...+||||||||||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt 128 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTA 128 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHH
Confidence 565 58 89999999999999999999999999 45666664 368999999999999865679999999999
Q ss_pred hhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccc------------
Q 013492 224 CLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGD------------ 291 (442)
Q Consensus 224 ~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~------------ 291 (442)
|++|++++|+++|| |++++|||+|+|||+
T Consensus 129 ~~~~~l~pL~~~~~---------------------------------------I~~~~vtt~~~~SgaG~~~~~~l~~q~ 169 (331)
T 2yv3_A 129 ILAMALWPLHRAFQ---------------------------------------AKRVIVATYQAASGAGAKAMEELLTET 169 (331)
T ss_dssp HHHHHHHHHHHHHC---------------------------------------EEEEEEEEEBCGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---------------------------------------ceEEEEEEEeecccCCcchhHHHHHHH
Confidence 99999999999999 999999999999999
Q ss_pred hhhhcc-chhhhhhhhccccceecCC--------CchhHHH----HHhc--cccCCceeEEEEeeCcCcceeEEEEEEEc
Q 013492 292 QRLLDA-SHRDLRRARAAALNIVPTS--------TGAAKAV----ALVL--PALKGKLNGIALRVPTPNVSVVDLVVQVS 356 (442)
Q Consensus 292 Q~~lD~-~h~d~rr~raaa~NIIPts--------tGaakav----~kVl--PeL~gkl~g~avRVPt~~vs~vdl~v~l~ 356 (442)
|+++|. .++++|++|++++||+|++ |++++++ .+++ |+|+ ++++++|||++++|+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~i~~e~~kil~~~~l~--v~~~~~rVP~~~g~~~~~~~~l~ 247 (331)
T 2yv3_A 170 HRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMKVVWETHKIFGDDTIR--ISATAVRVPTLRAHAEAVSVEFA 247 (331)
T ss_dssp HHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHHHHHHHHHHTTCTTCE--EEEECCBCSCSSEEEEEEEEEES
T ss_pred HhhhcCccccccccchhhhcCcccccCccccCCCcHHHHHHHHHHHHHhCCCCce--EEEEEEEeccCceEEEEEEEEEC
Confidence 888884 3579999999999999999 8888888 8998 9985 99999999999999999999999
Q ss_pred cCCCHHHHHHHHHhcccccCCCceeeccCC-----eeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCC-cchhhhH
Q 013492 357 KKTFAEEVNAAFRESADNELKGILSVCDEP-----LVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRV 430 (442)
Q Consensus 357 k~~~~eeV~~a~~~aa~~~lkgil~~~~~~-----~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE-~GYs~Rv 430 (442)
+++++|||+++|++++. +.+.++| .-..+..|+.+-.+---.... ..++.+.++++.||- +|.|-.-
T Consensus 248 ~~~t~eei~~~~~~~~~------v~v~~~~~~~~~p~~~~~~g~~~~~igr~~~d~-~~~~~l~~~~~~DNl~kGAAg~A 320 (331)
T 2yv3_A 248 RPVTPEAAREVLKEAPG------VEVVDEPEAKRYPMPLTASGKWDVEVGRIRKSL-AFENGLDFFVVGDQLLKGAALNA 320 (331)
T ss_dssp SCCCHHHHHHHHTTSTT------CCBCCBTTTTBCCCHHHHTTCSSEEEEEEEECS-SSTTEEEEEEEEETTHHHHTTHH
T ss_pred CCCCHHHHHHHHHcCCC------eEEEeCCCcCCCCChhhccCCceEEEEEEEECC-CCCCEEEEEEEechHHHHHHHHH
Confidence 99999999999998543 2222221 111255565544432110000 024568899999999 9999998
Q ss_pred hHHHHHHhh
Q 013492 431 VDLADIVAN 439 (442)
Q Consensus 431 vdl~~~~~~ 439 (442)
|-.|++|.+
T Consensus 321 Vq~~nl~~~ 329 (331)
T 2yv3_A 321 VQIAEEWLK 329 (331)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhh
Confidence 888888754
No 25
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3e-48 Score=386.11 Aligned_cols=302 Identities=17% Similarity=0.162 Sum_probs=238.5
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||+|+| ||+|||.++|.|.++..+.++++++++.. + . +..+.++|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~------------~-~-----------g~~~~~~g~~i~~~- 59 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE------------S-A-----------GQRMGFAESSLRVG- 59 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT------------T-T-----------TCEEEETTEEEECE-
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC------------C-C-----------CCccccCCcceEEe-
Confidence 457999999 99999999999996644579999999631 0 1 12344677767664
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCC-CCCceeeccCccCCCCCC--CeEecCCchh
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPDE--PIISNASCTT 222 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~-d~pt~V~gVN~~~y~~~~--~IISnaSCTT 222 (442)
+.+|.. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..+ ++|++|+|||++.|+... +|||||||+|
T Consensus 60 ~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 60 DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 345544 74 8999999999999999999999999987777877653 569999999999998643 7999999999
Q ss_pred hhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh-hhccch--
Q 013492 223 NCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR-LLDASH-- 299 (442)
Q Consensus 223 n~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~-~lD~~h-- 299 (442)
||++|++++|+++|| |++++|||+|+|||+|+ .+|..|
T Consensus 136 t~~~~~l~pL~~~~~---------------------------------------i~~~~v~t~~~~SgaG~~~~~~~~~~ 176 (340)
T 2hjs_A 136 AELCEVLAPLLATLD---------------------------------------CRQLNLTACLSVSSLGREGVKELARQ 176 (340)
T ss_dssp HHHHHHHHHHTTTCC---------------------------------------EEEEEEEEEECGGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC---------------------------------------cceEEEEEecccCCCCccccHhHHHH
Confidence 999999999999999 99999999999999996 578766
Q ss_pred -hhhhhh---------hccccceecCCC-----c-------hhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEcc
Q 013492 300 -RDLRRA---------RAAALNIVPTST-----G-------AAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSK 357 (442)
Q Consensus 300 -~d~rr~---------raaa~NIIPtst-----G-------aakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k 357 (442)
+|||++ |++++||+|+++ | .++++.+|+|++++|++++|+|||++++|++++++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~ 256 (340)
T 2hjs_A 177 TAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAE 256 (340)
T ss_dssp HHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHHHHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESS
T ss_pred HHHHhccCCccccccchhhccCeeccccCcccCCccHHHHHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECC
Confidence 788885 778999999988 7 455567899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecC-CcchhhhHhHHHHH
Q 013492 358 KTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVVDLADI 436 (442)
Q Consensus 358 ~~~~eeV~~a~~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDN-E~GYs~Rvvdl~~~ 436 (442)
++++|||+++|++++.- -++...+-|-...+..|+.+-.+--...... .++.+.+.+|.|| .+|.|-.-|-.+++
T Consensus 257 ~~t~eei~~~~~~~~~V---~v~~~~~~p~~~~~v~g~~~~~vgr~r~~~~-~~~~l~~~~~~DNl~kGAA~~avq~~~l 332 (340)
T 2hjs_A 257 PVDLAAVTRVLDATKGI---EWVGEGDYPTVVGDALGQDETYVGRVRAGQA-DPCQVNLWIVSDNVRKGAALNAVLLGEL 332 (340)
T ss_dssp CCCHHHHHHHHHHSTTE---EECCTTCCCCCCCCCTTSSCEEEEEEEECSS-CTTEEEEEEEECCCCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCc---EEeCCCCCCccHHHcCCCCEEEEEEEEecCC-CCCEEEEEEEechHHHHHHHHHHHHHHH
Confidence 99999999999975421 1121111222111555555444322111111 3457889999999 99999999988888
Q ss_pred Hhhc
Q 013492 437 VANN 440 (442)
Q Consensus 437 ~~~~ 440 (442)
|..+
T Consensus 333 ~~~~ 336 (340)
T 2hjs_A 333 LIKH 336 (340)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7653
No 26
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.4e-49 Score=394.01 Aligned_cols=274 Identities=17% Similarity=0.231 Sum_probs=222.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccC--cccccCCcce-eeecCCcEEECCEEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYD--STLGIFEADV-KPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyD--St~g~f~~~v-~~~~~~~i~v~Gk~I~v~ 144 (442)
++||||||+|+|||.++|++.+++ ++|+++|+|. ++...+++++|+ ++||.|.+.+ . .++.++.+++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~--~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~-~~~~~l~v~~~----- 71 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQD--DMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKL-FEKAGIEVAGT----- 71 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSS--SEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHH-HHHTTCCCCEE-----
T ss_pred CeEEEEEeECHHHHHHHHHHHcCC--CcEEEEEEcC-ChhHHHHhcCCcchhhccccccceee-ecCCceEEcCC-----
Confidence 379999999999999999998864 5999999997 467778899888 8999988776 3 44455666552
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCC--CceeeccCccCCCCCCCeEecCCchh
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI--PTYVVGVNADAYKPDEPIISNASCTT 222 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~--pt~V~gVN~~~y~~~~~IISnaSCTT 222 (442)
+.++.| ++|+||+|||.+.+++.++.|+++|++ ||+++|.++|. |++|||||++.|+. .+||+||||||
T Consensus 72 ----~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~t 142 (337)
T 1cf2_P 72 ----VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNT 142 (337)
T ss_dssp ----HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ----HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHH
Confidence 122212 799999999999999999999999965 98888875454 99999999999985 68999999999
Q ss_pred hhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhh
Q 013492 223 NCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDL 302 (442)
Q Consensus 223 n~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~ 302 (442)
|||+|++++|+++|| |+++.|||+|++||. +
T Consensus 143 t~l~~~l~pL~~~~g---------------------------------------I~~~~vtt~~a~s~p-------~--- 173 (337)
T 1cf2_P 143 TGLCRTLKPLHDSFG---------------------------------------IKKVRAVIVRRGADP-------A--- 173 (337)
T ss_dssp HHHHHHHHHHHHHHC---------------------------------------EEEEEEEEEEESSCT-------T---
T ss_pred HHHHHHHHHHHHhcC---------------------------------------cceeEEEEEEEeecC-------C---
Confidence 999999999999999 999999999999981 1
Q ss_pred hhhhccccceecC----CCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCC
Q 013492 303 RRARAAALNIVPT----STGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKG 378 (442)
Q Consensus 303 rr~raaa~NIIPt----stGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkg 378 (442)
+.+|++++||+|+ .+++++++.++| +|+ ++++|+|||+++||++++++++++++++|||+++|++++...+
T Consensus 174 ~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l~--v~~t~~rVPv~~g~~~~~~v~l~~~~t~eei~~~~~~~~~v~v-- 248 (337)
T 1cf2_P 174 QVSKGPINAIIPNPPKLPSHHGPDVKTVL-DIN--IDTMAVIVPTTLMHQHNVMVEVEETPTVDDIIDVFEDTPRVIL-- 248 (337)
T ss_dssp CTTCCCSSCCEESSSSSSCTHHHHHHTTS-CCC--EEEEEEEESCCSCEEEEEEEEESSCCCHHHHHHHHHHSTTEEE--
T ss_pred ccccchhcCEEeccCCCCCcchHHHHhhh-eeE--EEEEEEEcCccCeEEEEEEEEECCCCCHHHHHHHHHhCCCcEE--
Confidence 3456889999999 789999999999 885 9999999999999999999999999999999999999865322
Q ss_pred ceeeccCCeeeeccCCCCcceEEeCCC--CccccCCeEEEEEEecCC
Q 013492 379 ILSVCDEPLVSVDFRCSDVSSTVDSSL--TLVMGDDMVKVIAWYDNE 423 (442)
Q Consensus 379 il~~~~~~~VS~Df~~~~~S~~~d~~~--t~~~~~~~vKv~~WyDNE 423 (442)
.+++ +.-+..+.+++... +...+ ++.++..||||-
T Consensus 249 ----~~~~-----~~~~~~~~~~~~~~~~gr~r~-d~~~~~~w~~~~ 285 (337)
T 1cf2_P 249 ----ISAE-----DGLTSTAEIMEYAKELGRSRN-DLFEIPVWRESI 285 (337)
T ss_dssp ----ECTT-----TTCCSHHHHHHHHHHHTCGGG-CCCSEEEEGGGC
T ss_pred ----eccc-----cCCCCCcchhhhhhhcCCCcc-Cchhheeehhee
Confidence 1222 22222233332211 33333 488999999973
No 27
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=4.6e-47 Score=377.06 Aligned_cols=298 Identities=20% Similarity=0.226 Sum_probs=218.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+| ||+|||.++|.|.+++.+++|+++|++..+ .+..+.++|+.+.+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~------------------------~G~~~~~~~~~i~~~-~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS------------------------EGKTYRFNGKTVRVQ-N 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT------------------------TTCEEEETTEEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC------------------------CCCceeecCceeEEe-c
Confidence 48999999 999999999999988434699999996311 122344778777774 4
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCCC--CCeEecCCc
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--EPIISNASC 220 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~~--~~IISnaSC 220 (442)
.+|. +|. ++|+||+|||.+.+++.++.|+++|++ +|+.++. ++.|++|+|||++.|+.. .+|||||||
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~--vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C 131 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVV--VIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNC 131 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCE--EEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCCh
Confidence 4554 684 899999999999999999999999994 4555553 467999999999999852 679999999
Q ss_pred hhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh-hhccch
Q 013492 221 TTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR-LLDASH 299 (442)
Q Consensus 221 TTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~-~lD~~h 299 (442)
+|||++|++++|+++|| |++++|||+|+|||+|+ .+|..|
T Consensus 132 ~tt~~~~~l~pL~~~~~---------------------------------------i~~~~vtt~~~~SgaG~~~~~~~~ 172 (336)
T 2r00_A 132 STIQMLVALKPIYDAVG---------------------------------------IERINVTTYQSVSGAGKAGIDELA 172 (336)
T ss_dssp HHHHHHHHHHHHHHHHC---------------------------------------EEEEEEEEEEESSSCCTTSCC---
T ss_pred HHHHHHHHHHHHHHhCC---------------------------------------ccEEEEEEEEecccCChhhhHHHH
Confidence 99999999999999999 99999999999999975 888766
Q ss_pred h------------hhhhhhccccceecCCC-----ch-------hHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEE
Q 013492 300 R------------DLRRARAAALNIVPTST-----GA-------AKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQV 355 (442)
Q Consensus 300 ~------------d~rr~raaa~NIIPtst-----Ga-------akav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l 355 (442)
. ++|++|++++|+||+++ |+ ++++.+++|++++|++++|+|||++++|++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l 252 (336)
T 2r00_A 173 GQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVET 252 (336)
T ss_dssp --------------------------CCBCTTTCSSCBHHHHHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEE
T ss_pred HHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHHHHHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEe
Confidence 4 78999999999999975 74 566678899999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHhcccccCCCceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCC-cchhhhHhHHH
Q 013492 356 SKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLA 434 (442)
Q Consensus 356 ~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE-~GYs~Rvvdl~ 434 (442)
++++++|||+++|++++.-. ++...+-|-...+..|+.+-.+--...... .++.+.++++.||- +|-|-.-|-.|
T Consensus 253 ~~~~t~~ei~~~~~~~~~v~---v~~~~~~p~~~~~v~g~~~~~vgr~~~d~~-~~~~l~~~~~~DNl~kGAAg~Avq~~ 328 (336)
T 2r00_A 253 RAPIDAEQVMDMLEQTDGIE---LFRGADFPTQVRDAGGKDHVLVGRVRNDIS-HHSGINLWVVADNVRKGAATNAVQIA 328 (336)
T ss_dssp SSCCCHHHHHHHHHHSTTEE---ECCCCSSGGGCCCCCSSSCEEEEEEEEETT-EEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCeE---EECCCCCCcCHHHhCCCceEEEEEEEecCC-CCCEEEEEEEehhHHHhHHHHHHHHH
Confidence 99999999999999843211 111111121111455554433310000000 23457888999998 89988888888
Q ss_pred HHHhh
Q 013492 435 DIVAN 439 (442)
Q Consensus 435 ~~~~~ 439 (442)
++|..
T Consensus 329 nl~~~ 333 (336)
T 2r00_A 329 ELLVR 333 (336)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87754
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=7.2e-47 Score=376.56 Aligned_cols=227 Identities=15% Similarity=0.201 Sum_probs=190.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||||+|+|||.++|++.+++ ++||++|+|. +++...++++++- +.++..+
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p--~~elvav~d~-~~~~~~~~a~~~g-----------------------~~~~~~~ 54 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQP--DMKLVGVAKT-SPNYEAFIAHRRG-----------------------IRIYVPQ 54 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEECS-SCSHHHHHHHHTT-----------------------CCEECCG
T ss_pred CeEEEEEecCHHHHHHHHHHHcCC--CCEEEEEEcC-ChHHHHHHHHhcC-----------------------cceecCc
Confidence 379999999999999999999875 5999999996 4666677776531 1112222
Q ss_pred CCCCCCCCC-------------ccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCC-CCCceeeccCccCCCCCCC
Q 013492 148 NPVNLPWGD-------------LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPDEP 213 (442)
Q Consensus 148 ~p~~l~W~~-------------~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~-d~pt~V~gVN~~~y~~~~~ 213 (442)
+|.++ |++ .++|+||+|||.+.+++.++.|+++|+|+|.++++.++ ..+++|+|+|++.+.+ .+
T Consensus 55 ~~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~ 132 (340)
T 1b7g_O 55 QSIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KK 132 (340)
T ss_dssp GGHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CS
T ss_pred CHHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CC
Confidence 33332 331 27999999999999999999999999998888888654 2379999999776543 35
Q ss_pred eEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh
Q 013492 214 IISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR 293 (442)
Q Consensus 214 IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~ 293 (442)
+|+|+|||||||+|++|+|+++|| |+++.|||+|+++.
T Consensus 133 iIsnpsCtt~~l~~~lk~L~~~~g---------------------------------------I~~~~~tt~~~~~~--- 170 (340)
T 1b7g_O 133 YIRVVSCNTTALLRTICTVNKVSK---------------------------------------VEKVRATIVRRAAD--- 170 (340)
T ss_dssp EEEECCHHHHHHHHHHHHHHTTSC---------------------------------------EEEEEEEEEEESSC---
T ss_pred CcccCCcHHHHHHHHHHHHHHhCC---------------------------------------eEEEEEEEEeccCC---
Confidence 999999999999999999999999 99999999998853
Q ss_pred hhccchhhhhhhhccccceecC----CCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHH
Q 013492 294 LLDASHRDLRRARAAALNIVPT----STGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFR 369 (442)
Q Consensus 294 ~lD~~h~d~rr~raaa~NIIPt----stGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~ 369 (442)
+|++ .|++..||+|+ ++|+++++.+++|+|+ |+|+|+||||+++|++|+++++++++++|||+++|+
T Consensus 171 ----~~~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~l~--l~~~a~rVPv~~gh~~~l~v~l~~~~t~eei~~~l~ 241 (340)
T 1b7g_O 171 ----QKEV---KKGPINSLVPDPATVPSHHAKDVNSVIRNLD--IATMAVIAPTTLMHMHFINITLKDKVEKKDILSVLE 241 (340)
T ss_dssp ----TTCC---SCCCSSCCEESSSSSSCTHHHHHHTTSTTCE--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHH
T ss_pred ----cccc---hHHHHcCCCCCCcCCCCCchhHHHHhCCCCc--EEEEEEEeccCCeEEEEEEEEECCCCCHHHHHHHHH
Confidence 2444 45789999998 7999999999999996 999999999999999999999999999999999999
Q ss_pred hccc
Q 013492 370 ESAD 373 (442)
Q Consensus 370 ~aa~ 373 (442)
++++
T Consensus 242 ~a~~ 245 (340)
T 1b7g_O 242 NTPR 245 (340)
T ss_dssp TCTT
T ss_pred cCCC
Confidence 8876
No 29
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.3e-46 Score=370.35 Aligned_cols=239 Identities=20% Similarity=0.256 Sum_probs=207.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccC--cccccCCcceeeecCCcEEECCEEEEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYD--STLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyD--St~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
|++||||||||+|||.++|++.+++ +++|++|+|. +++.+.++++|+ ++||+|.+.+...+++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~--~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------ 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQD--DMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------ 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCC--CCEEEEEEcC-CHHHHHHHHHhcCccccccccccceeccCCceEEcC------
Confidence 5689999999999999999998874 5999999997 477888999888 8899988776213333444433
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCC-C-CceeeccCccCCCCCCCeEecCCchh
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-I-PTYVVGVNADAYKPDEPIISNASCTT 222 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d-~-pt~V~gVN~~~y~~~~~IISnaSCTT 222 (442)
++.++.| ++|+|++|||.+...+.++.|+++| |+||+++|.+.| . |++|+|||++.|++ .+||+|+||+|
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t 143 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNT 143 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHH
Confidence 3333434 7999999999999999999999999 569999998655 4 69999999999975 68999999999
Q ss_pred hhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhhhccchhhh
Q 013492 223 NCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRLLDASHRDL 302 (442)
Q Consensus 223 n~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~lD~~h~d~ 302 (442)
|||+|++++|++. |++|.|+|+|++||.|
T Consensus 144 ~~l~P~~~~l~~~-----------------------------------------I~~g~i~ti~a~s~~~---------- 172 (334)
T 2czc_A 144 TGLVRTLSAIREY-----------------------------------------ADYVYAVMIRRAADPN---------- 172 (334)
T ss_dssp HHHHHHHHHHGGG-----------------------------------------EEEEEEEEEEESSCTT----------
T ss_pred HHHHHHHHHHHHH-----------------------------------------hccccEEEEEEecCcc----------
Confidence 9999999999874 8899999999999964
Q ss_pred hhhhccccceecC---CCchhHHHHHhccccCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccC
Q 013492 303 RRARAAALNIVPT---STGAAKAVALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNEL 376 (442)
Q Consensus 303 rr~raaa~NIIPt---stGaakav~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~l 376 (442)
|++|++++||+|+ ++|++|++++++| |+ ++|+|+|||++++|++++++++++++++||++++|+++++..|
T Consensus 173 ~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~~~~rVPv~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~~l 246 (334)
T 2czc_A 173 DTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IETMAFVVPTTLMHVHSVMVELKKPLTKDDVIDIFENTTRVLL 246 (334)
T ss_dssp CCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEEEEEEESCSSCEEEEEEEEESSCCCHHHHHHHHHTSTTEEE
T ss_pred ccccChhhcEEeccCCCCchhhhhheEEE-EE--EEEEEEEcCCCceEEEEEEEEECCCCCHHHHHHHHHhccCCEe
Confidence 5678999999999 9999999999999 86 9999999999999999999999999999999999999987543
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=4.2e-44 Score=360.73 Aligned_cols=237 Identities=15% Similarity=0.153 Sum_probs=198.5
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr-~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
+|||||| ||+||+.++| .+.+++ +++++| +++.|+| +|+- +. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~---~~~v~i----------~~~~~~s-~G~~---v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD---FDAIRP----------VFFSTSQ-LGQA---AP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG---GGGSEE----------EEEESSS-TTSB---CC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC---CCeEEE----------EEEEeCC-CCCC---cc-------ccCCCceEEEec
Confidence 6999999 9999999999 555543 555444 5777786 7751 11 134555666655
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCCC--C--CeEecC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--E--PIISNA 218 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~~--~--~IISna 218 (442)
.+|.+ |. ++|+||+|||.+.+++.++.|+++|+|++||++|++ ++.|++|+|||++.|+.. . ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 55544 64 899999999999999999999999999999999985 367999999999999752 2 699999
Q ss_pred CchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchhh----
Q 013492 219 SCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQRL---- 294 (442)
Q Consensus 219 SCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~~---- 294 (442)
||||||++|.+++|+++|| |+++.|+|||++||+++-
T Consensus 134 ~Cttt~~~~al~pL~~~~~---------------------------------------I~~~~vtt~~a~SGaG~~~~~e 174 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDL---------------------------------------VDWVSVATYQAASGGGARHMRE 174 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTC---------------------------------------EEEEEEEEEBCGGGTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCC---------------------------------------CcEEEEEEEeccccccccchHH
Confidence 9999999999999999999 999999999999999431
Q ss_pred ---------------hccchh---hhhh----------------hhccccceecCCCc------------hhHHHHHhcc
Q 013492 295 ---------------LDASHR---DLRR----------------ARAAALNIVPTSTG------------AAKAVALVLP 328 (442)
Q Consensus 295 ---------------lD~~h~---d~rr----------------~raaa~NIIPtstG------------aakav~kVlP 328 (442)
+|.+|+ |+|| ++.+++|+||++++ .++++.+++|
T Consensus 175 l~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~ 254 (367)
T 1t4b_A 175 LLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILN 254 (367)
T ss_dssp HHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCSCCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhhccccccccccccchhhhhhccccccccccCcccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhC
Confidence 233454 8888 58899999999998 7888899996
Q ss_pred c-cCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcc
Q 013492 329 A-LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESA 372 (442)
Q Consensus 329 e-L~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa 372 (442)
+ .+.+++++|+|||++++|++++++++++++++|||+++|++++
T Consensus 255 ~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~~t~eei~~~l~~~~ 299 (367)
T 1t4b_A 255 TSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHN 299 (367)
T ss_dssp CSSCCCEEEECCEESCSSEEEEEEEEEESSCCCHHHHHHHHHHHC
T ss_pred cCCCceEEEEEEEcCccceEEEEEEEEECCCCCHHHHHHHHHhcC
Confidence 5 5568999999999999999999999999999999999999874
No 31
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=4e-41 Score=337.43 Aligned_cols=291 Identities=13% Similarity=0.101 Sum_probs=223.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+| ||+|||.++|.|.+++ ++|+++|++..+. -++|++.||.|.+.+- ..+.+ .+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p--~~elvai~~~~~~-----g~~~~~~~~~~~~~v~----~dl~~--------~~ 76 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHP--HFQVTLMTADRKA-----GQSMESVFPHLRAQKL----PTLVS--------VK 76 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCS--SEEEEEEBCSTTT-----TSCHHHHCGGGTTSCC----CCCBC--------GG
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCC--CcEEEEEeCchhc-----CCCHHHhCchhcCccc----cccee--------cc
Confidence 48999999 9999999999999874 5999999985322 2678999988775420 11111 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCC--CC------------------Cceeecc---
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG--DI------------------PTYVVGV--- 203 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~--d~------------------pt~V~gV--- 203 (442)
.+ .|. ++|+||+|||.+.+++.++.| ++|+ +||+.+++. +. |++|+|+
T Consensus 77 ---~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 77 ---DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp ---GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred ---hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 22 575 899999999999999999999 9998 467777642 21 4567776
Q ss_pred CccCCCCCCCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhcccccccccccccccccee--eEE
Q 013492 204 NADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGII--KGT 281 (442)
Q Consensus 204 N~~~y~~~~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~--~g~ 281 (442)
|++.|+. .+|||||||+|||++|.+++|+++|| |+ +++
T Consensus 148 n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~---------------------------------------i~~~~i~ 187 (359)
T 1xyg_A 148 LREDIKK-ARLVANPGCYPTTIQLPLVPLLKANL---------------------------------------IKHENII 187 (359)
T ss_dssp HHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTC---------------------------------------BCSSSCE
T ss_pred CHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCC---------------------------------------CCCCeEE
Confidence 9999985 68999999999999999999999999 99 999
Q ss_pred EEEeeccccchh-hhccchhhhhhhhccccceecCCCchhHHHHHhccccC---C-------ceeEEEEeeCcCcceeEE
Q 013492 282 MTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALK---G-------KLNGIALRVPTPNVSVVD 350 (442)
Q Consensus 282 mTTiha~Tg~Q~-~lD~~h~d~rr~raaa~NIIPtstGaakav~kVlPeL~---g-------kl~g~avRVPt~~vs~vd 350 (442)
|+|+|++||+|+ ..|.+|.++ ++.||+|+++|+ .+++||++ | |++++++|||+++||+++
T Consensus 188 v~t~~~~SGaG~~~~~~~~~~~-----~~~ni~py~~~~----h~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~ 258 (359)
T 1xyg_A 188 IDAKSGVSGAGRGAKEANLYSE-----IAEGISSYGVTR----HRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQST 258 (359)
T ss_dssp EEEEEEGGGGCSCCCGGGBHHH-----HTTCCEECSCSC----CTHHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEE
T ss_pred EEEEEEccccCcccchhhhhHH-----HhcCeecccccc----cccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEE
Confidence 999999999998 577777654 468999999986 34555554 4 899999999999999999
Q ss_pred EEEEEccCCCHHHHHHHHHhcccc-cCCCceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCC-cchhh
Q 013492 351 LVVQVSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQ 428 (442)
Q Consensus 351 l~v~l~k~~~~eeV~~a~~~aa~~-~lkgil~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE-~GYs~ 428 (442)
++++++++++.|||+++|+++.++ ++--++...+-|-. .+..|+.+-.+- -... ..++.+.++++.||- +|.|-
T Consensus 259 i~~~l~~~~t~eei~~~~~~~y~~~~~V~v~~~~~~p~~-~~v~g~n~~~ig-~~~d--~~~~~l~~~~~~DNl~kGAAg 334 (359)
T 1xyg_A 259 IYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRT-HNVRGSNYCHMS-VFPD--RIPGRAIIISVIDNLVKGASG 334 (359)
T ss_dssp EEEEBCTTCCHHHHHHHHHHHHTTCSSEEECCTTCCCBG-GGTTTSSCEEEE-EEEC--SSTTEEEEEEEECTTTTTTHH
T ss_pred EEEEeCCCCCHHHHHHHHHHhhCCCCCEEEcCCCCCCCH-HHhcCCCeEEEE-EEEe--CCCCEEEEEEEehhhhHhHHH
Confidence 999999999999999999987653 32222221112322 255565544432 1110 123568899999999 89999
Q ss_pred hHhHHHHHHhh
Q 013492 429 RVVDLADIVAN 439 (442)
Q Consensus 429 Rvvdl~~~~~~ 439 (442)
.-|-.+++|..
T Consensus 335 ~Avq~~nl~~g 345 (359)
T 1xyg_A 335 QALQNLNIMLG 345 (359)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 98888888754
No 32
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.4e-41 Score=338.85 Aligned_cols=240 Identities=18% Similarity=0.204 Sum_probs=197.7
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+| ||+||+.++|+|.+++ ++||++|++.. + ..-.+|++.|+.+. ++.+.++|+.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p--~~elvai~~s~--~--~~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHP--YLELVKVSASP--S--KIGKKYKDAVKWIE-------QGDIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCS--SEEEEEEECCG--G--GTTSBHHHHCCCCS-------SSSCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCC--CcEEEEEecCh--h--hcCCCHHHhcCccc-------ccccccCCceeEE-ee
Confidence 58999999 9999999999998874 59999998521 1 11234677777553 1122233333344 33
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCC----------CC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKP----------DE 212 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~----------~~ 212 (442)
.+|.. | .++|+||+|||.+.+++.++.|+++|+| ||+++++ ++.|++|+|||++.|.. ..
T Consensus 70 ~d~~~--~--~~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--H--KDVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--G--TTCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--h--cCCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 45543 5 2899999999999999999999999995 7888875 36799999999998872 23
Q ss_pred CeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccch
Q 013492 213 PIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQ 292 (442)
Q Consensus 213 ~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q 292 (442)
+|||||||+|||++|.+++|+++|| |++++|||+|+|||+|
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~g---------------------------------------i~~i~v~t~~~~SGaG 184 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIAT---------------------------------------KSKIIITTLQAVSGAG 184 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHH---------------------------------------TSEEEEEEEECGGGGC
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcC---------------------------------------CcEEEEEEEEecCcCC
Confidence 5999999999999999999999999 9999999999999999
Q ss_pred hhhccchhhhhhhhccccceecCCCch-hHHH---HHhccccCC--------ceeEEEEeeCcCcceeEEEEEEEccCCC
Q 013492 293 RLLDASHRDLRRARAAALNIVPTSTGA-AKAV---ALVLPALKG--------KLNGIALRVPTPNVSVVDLVVQVSKKTF 360 (442)
Q Consensus 293 ~~lD~~h~d~rr~raaa~NIIPtstGa-akav---~kVlPeL~g--------kl~g~avRVPt~~vs~vdl~v~l~k~~~ 360 (442)
+.. .| .+.+++||+|+++|+ .|.+ .++||+|+| |++++++|||+++||+++++++++++++
T Consensus 185 ~~~--~~-----~~~~~~ni~py~~~~e~k~~~E~~~~l~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~~t 257 (350)
T 2ep5_A 185 YNG--IS-----FMAIEGNIIPYIKGEEDKIAKELTKLNGKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNERIN 257 (350)
T ss_dssp SSS--SB-----HHHHTTCCBCCCTTHHHHHHHHHHHHTCEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSCCC
T ss_pred CCC--CC-----ChHHhCCEEeccCCcchHHHHHHHHHHhhccccccccccccEEEEeEEecccceEEEEEEEEECCCCC
Confidence 872 22 356899999999996 7777 689999887 8999999999999999999999999999
Q ss_pred HHHHHHHHHhccc
Q 013492 361 AEEVNAAFRESAD 373 (442)
Q Consensus 361 ~eeV~~a~~~aa~ 373 (442)
+|||+++|+++.+
T Consensus 258 ~eei~~~~~~~~~ 270 (350)
T 2ep5_A 258 IEEIKKTLKNFKS 270 (350)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999875
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.6e-39 Score=323.70 Aligned_cols=243 Identities=21% Similarity=0.272 Sum_probs=193.8
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||+| ||+||+.++|.|.+++ ++||++|++.. +. .-.++++.|+.+... .+..+++.+.+ .
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p--~~ev~~i~~s~--~~--~g~~~~~~~~~~~~~-------~~~~~~~~~~~-~ 72 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHP--MFELTALAASE--RS--AGKKYKDACYWFQDR-------DIPENIKDMVV-I 72 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS--SEEEEEEEECT--TT--TTSBHHHHSCCCCSS-------CCCHHHHTCBC-E
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCC--CCEEEEEEccc--cc--ccccHHHhccccccc-------ccccCceeeEE-E
Confidence 678999999 9999999999998774 59999998521 10 112346667655210 01112222233 2
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCC----------C
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKP----------D 211 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~----------~ 211 (442)
+.++.+ |.++++|+||+|||.+.+++.++.|+++|++ ||++|++ ++.|++|+|+|++.|.. .
T Consensus 73 ~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 148 (354)
T 1ys4_A 73 PTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWD 148 (354)
T ss_dssp ESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCS
T ss_pred eCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcccC
Confidence 235544 6545899999999999999999999999985 7999985 35799999999999873 2
Q ss_pred CCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccc
Q 013492 212 EPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGD 291 (442)
Q Consensus 212 ~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~ 291 (442)
.+||+||||+|||++|.+++|+++|| |+++.|+|+|++||+
T Consensus 149 ~~iIanpgC~tt~~~l~l~pL~~~~g---------------------------------------i~~~~v~t~~~~SGa 189 (354)
T 1ys4_A 149 GAIITNPNCSTICAVITLKPIMDKFG---------------------------------------LEAVFIATMQAVSGA 189 (354)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHHC---------------------------------------CSEEEEEEEBCSGGG
T ss_pred CeEEECCCHHHHHHHHHHHHHHHhcC---------------------------------------CcEEEEEEEEEcCcC
Confidence 35999999999999999999999999 999999999999999
Q ss_pred hhhhccchhhhhhhhccccceecCCCch-hHHH---HHhccccCC--------ceeEEEEeeCcCcceeEEEEEEEccCC
Q 013492 292 QRLLDASHRDLRRARAAALNIVPTSTGA-AKAV---ALVLPALKG--------KLNGIALRVPTPNVSVVDLVVQVSKKT 359 (442)
Q Consensus 292 Q~~lD~~h~d~rr~raaa~NIIPtstGa-akav---~kVlPeL~g--------kl~g~avRVPt~~vs~vdl~v~l~k~~ 359 (442)
|+.. .| .+.++.||+|+++|. .|.+ .++|++++| |++++++|||+++||++++++++++++
T Consensus 190 G~~~--~~-----~~~~~~ni~py~~~~~~k~~~Ei~~~l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~~ 262 (354)
T 1ys4_A 190 GYNG--VP-----SMAILDNLIPFIKNEEEKMQTESLKLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGA 262 (354)
T ss_dssp CTTT--SC-----HHHHTTCCBSCCTTHHHHHHHHHHHHTSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSCC
T ss_pred Cccc--cc-----chHHhCCEEeccCchhhHHHHHHHHHHhccccccccCCCceEEEEEEEecccceEEEEEEEEECCCC
Confidence 9872 22 246899999999985 4444 456777665 799999999999999999999999999
Q ss_pred CHHHHHHHHHhccc
Q 013492 360 FAEEVNAAFRESAD 373 (442)
Q Consensus 360 ~~eeV~~a~~~aa~ 373 (442)
+.|||+++|+++..
T Consensus 263 t~eei~~~~~~~~~ 276 (354)
T 1ys4_A 263 EPEEIKEVMDKFDP 276 (354)
T ss_dssp CHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHhhc
Confidence 99999999999875
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=2e-38 Score=316.13 Aligned_cols=287 Identities=16% Similarity=0.052 Sum_probs=211.9
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+| ||+|||.++|.|.+++ .+|+++|++..+. -.+|++.|+.|.+... + .+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p--~~elv~v~s~~~~-----g~~~~~~~~~~~g~~~------~-------~~~-- 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHP--YLEVKQVTSRRFA-----GEPVHFVHPNLRGRTN------L-------KFV-- 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCT--TEEEEEEBCSTTT-----TSBGGGTCGGGTTTCC------C-------BCB--
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCC--CcEEEEEECchhh-----CchhHHhCchhcCccc------c-------ccc--
Confidence 48999999 9999999999999874 5999999984322 2567888887654211 1 111
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCC--CC-----------------Cceeecc---C
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG--DI-----------------PTYVVGV---N 204 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~--d~-----------------pt~V~gV---N 204 (442)
++. .| .++|+||+|||.+.+++.++.|+++|++ ||+.++.. +. |.+|+|+ |
T Consensus 62 -~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n 134 (345)
T 2ozp_A 62 -PPE--KL--EPADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELY 134 (345)
T ss_dssp -CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHH
T ss_pred -chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEeccccC
Confidence 122 37 3899999999999999999999999985 56665531 11 3556555 9
Q ss_pred ccCCCCCCCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhcccccccccccccccccee--eEEE
Q 013492 205 ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGII--KGTM 282 (442)
Q Consensus 205 ~~~y~~~~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~--~g~m 282 (442)
++.++. .+||+||||+|||++|.+++|+++|| |+ +++|
T Consensus 135 ~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~---------------------------------------i~~~~i~v 174 (345)
T 2ozp_A 135 REALKG-ADWIAGAGCNATATLLGLYPLLKAGV---------------------------------------LKPTPIFV 174 (345)
T ss_dssp HHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTC---------------------------------------BCSSCEEE
T ss_pred HHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcC---------------------------------------CCCCeEEE
Confidence 999975 68999999999999999999999999 98 9999
Q ss_pred EEeeccccchh-hhccchhhhhhhhccccceecCCCchhHHHHHhccccC-----C-ceeEEEEeeCcCcceeEEEEEEE
Q 013492 283 TTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALK-----G-KLNGIALRVPTPNVSVVDLVVQV 355 (442)
Q Consensus 283 TTiha~Tg~Q~-~lD~~h~d~rr~raaa~NIIPtstGaakav~kVlPeL~-----g-kl~g~avRVPt~~vs~vdl~v~l 355 (442)
+|+|++||+|+ .+|..|.++ +..||+|+++++ .+++||++ + |++++++|||+++||++++++++
T Consensus 175 ~t~~~~SGaG~~~~~~~~~~~-----~~~n~~py~~~~----h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l 245 (345)
T 2ozp_A 175 TLLISTSAGGAEASPASHHPE-----RAGSIRVYKPTG----HRHTAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFV 245 (345)
T ss_dssp EEEECSGGGCSSCCGGGCHHH-----HTTCCEEEECSC----CTHHHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEB
T ss_pred EEEEEccccCccccccccchh-----hccccccCCCCC----ccChHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEe
Confidence 99999999996 477777554 478999999885 56778776 6 89999999999999999999999
Q ss_pred ccCCCHHHHHHHHHhcccccCCCceeeccC-------CeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCC-cchh
Q 013492 356 SKKTFAEEVNAAFRESADNELKGILSVCDE-------PLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYS 427 (442)
Q Consensus 356 ~k~~~~eeV~~a~~~aa~~~lkgil~~~~~-------~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE-~GYs 427 (442)
+++++.|||+++|+++.+++ .+| .+.++ |-. .+..|+.+-.+ +...-...+.+.+++=-||= +|=|
T Consensus 246 ~~~~t~eei~~~~~~~y~~~-~~v-~v~~~~~~~~~~p~~-~~~~g~~~~~i---g~~~d~~~~~~~~~~~~DNl~kGAA 319 (345)
T 2ozp_A 246 QDGWSERDVWQAYREAYAGE-PFI-RLVKQKKGVHRYPDP-RFVQGTNYADI---GFELEEDTGRLVVMTAIDNLVKGTA 319 (345)
T ss_dssp CTTCCHHHHHHHHHHHHTTC-TTE-EECCCSSSSCCSCCH-HHHTTSCCEEE---EEEEETTTTEEEEEEEECTTTTTTH
T ss_pred CCCCCHHHHHHHHHHHhCCC-CCE-EEEeCCCCcCCCCCH-HHhcCCceEEE---EEEEeCCCCEEEEEEEeccHHHHHH
Confidence 99999999999999976532 233 23211 211 12333332222 11010112456666667884 5666
Q ss_pred hhHhHHHHHHh
Q 013492 428 QRVVDLADIVA 438 (442)
Q Consensus 428 ~Rvvdl~~~~~ 438 (442)
-.-|-.+++|.
T Consensus 320 g~Avq~~nl~~ 330 (345)
T 2ozp_A 320 GHALQALNVRM 330 (345)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 66666666654
No 35
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=7.9e-36 Score=299.97 Aligned_cols=305 Identities=18% Similarity=0.240 Sum_probs=211.4
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCC--ChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTG--GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~--~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
+++||||.| +|-+|+.++|.|.+++ .+||+.+.... +-+ +...+.+. .+..+.... ..+ .+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP--~~el~~l~S~~saGk~-~~~~~p~~-~~~~~~~~~-----~~~-------~v 69 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHP--YIKPAYLAGKGSVGKP-YGEVVRWQ-TVGQVPKEI-----ADM-------EI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCS--SEEEEEEEESTTTTSB-HHHHCCCC-SSSCCCHHH-----HTC-------BC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--CceEEEEECchhcCCC-hhHhcccc-ccccccccc-----ccc-------eE
Confidence 468999999 9999999999988875 59998885421 111 11111000 000000000 011 11
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCC--CCCCCceeeccCccCCCC--C--------
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG--KGDIPTYVVGVNADAYKP--D-------- 211 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsaps--k~d~pt~V~gVN~~~y~~--~-------- 211 (442)
++-++..+ .++|+||+|+|.+.+++.++.|+++|++.|.+|++- ++++|++|+|||++.++. .
T Consensus 70 -~~~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpk_A 70 -KPTDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 11233333 289999999999999999999999999766556554 346799999999999853 1
Q ss_pred CCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccc
Q 013492 212 EPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGD 291 (442)
Q Consensus 212 ~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~ 291 (442)
.+|||||+|+|||+++.+++|+++|| |+++.|+|+|+|||+
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~g---------------------------------------i~~v~v~t~~g~SGa 185 (359)
T 4dpk_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYK---------------------------------------MDGAFITTIQSLSGA 185 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSC---------------------------------------EEEEEEEEEECSGGG
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcC---------------------------------------CcEEEEEEEeccccC
Confidence 25999999999999999999999999 999999999999999
Q ss_pred hhhhccchhhhhhhhccccceecCCCch-hHH---HHHhccccCC----------ceeEEEEeeCcCcceeEEEEEEEcc
Q 013492 292 QRLLDASHRDLRRARAAALNIVPTSTGA-AKA---VALVLPALKG----------KLNGIALRVPTPNVSVVDLVVQVSK 357 (442)
Q Consensus 292 Q~~lD~~h~d~rr~raaa~NIIPtstGa-aka---v~kVlPeL~g----------kl~g~avRVPt~~vs~vdl~v~l~k 357 (442)
|+. ..+. +.+++|++|+.+|. .|. +.+++++|+| +++++++|||+++||++++++++++
T Consensus 186 G~~--~~~~-----~~~~~N~ipy~~~~e~k~~~Ei~kil~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~ 258 (359)
T 4dpk_A 186 GYP--GIPS-----LDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKE 258 (359)
T ss_dssp CSS--CSBG-----GGTTTCCEECCHHHHHHHHHHHHHHHHTSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESS
T ss_pred CCc--CccC-----hHHhCCeEeecCcHHHHHHHHHHHHHhhcccccccccccCCceEEEEEEecccccEEEEEEEEECC
Confidence 987 2221 46899999999876 554 6788998877 8999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCceeeccCCeeee-c---------cCCCC----cceEEeCCCCccccCCeEEEEEEecCC
Q 013492 358 KTFAEEVNAAFRESADNELKGILSVCDEPLVSV-D---------FRCSD----VSSTVDSSLTLVMGDDMVKVIAWYDNE 423 (442)
Q Consensus 358 ~~~~eeV~~a~~~aa~~~lkgil~~~~~~~VS~-D---------f~~~~----~S~~~d~~~t~~~~~~~vKv~~WyDNE 423 (442)
+++.|||+++|+++.+.+..=.|-...+|+|.+ | ..|.. ..+.| +.... .+++.+.+++=-||=
T Consensus 259 ~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~P~~~~~~g~~~~~~~~~~V-gr~r~-~~~~~l~~~~~~DNL 336 (359)
T 4dpk_A 259 ETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTRPQVYFDRWAGDIPGMSVVV-GRLKQ-VNKRMIRLVSLIHNT 336 (359)
T ss_dssp CCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEECCSTTCCCHHHHTTCTTTTTCSEEE-EEEEE-EETTEEEEEEEECTT
T ss_pred CCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCCCCHHHhhccCCCcCCeEEE-EEEEE-cCCCEEEEEEEEhhh
Confidence 999999999999987652111111122233222 0 11110 11111 00000 124557777778994
Q ss_pred -cchhhhHhHHHHHHhhc
Q 013492 424 -WGYSQRVVDLADIVANN 440 (442)
Q Consensus 424 -~GYs~Rvvdl~~~~~~~ 440 (442)
+|=|-.-|-.+++|.++
T Consensus 337 ~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpk_A 337 VRGAAGGGILAAELLVEK 354 (359)
T ss_dssp TTTTHHHHHHHHHHHHHT
T ss_pred hHhHHHHHHHHHHHHHHc
Confidence 67776666667766543
No 36
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=7.9e-36 Score=299.97 Aligned_cols=305 Identities=18% Similarity=0.240 Sum_probs=211.3
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCC--ChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTG--GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~--~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
+++||||.| +|-+|+.++|.|.+++ .+||+.+.... +-+ +...+.+. .+..+.... ..+ .+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP--~~el~~l~S~~saGk~-~~~~~p~~-~~~~~~~~~-----~~~-------~v 69 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHP--YIKPAYLAGKGSVGKP-YGEVVRWQ-TVGQVPKEI-----ADM-------EI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCS--SEEEEEEEESTTTTSB-HHHHCCCC-SSSCCCHHH-----HTC-------BC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--CceEEEEECchhcCCC-hhHhcccc-ccccccccc-----ccc-------eE
Confidence 468999999 9999999999988875 59998885421 111 11111000 000000000 011 11
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCC--CCCCCceeeccCccCCCC--C--------
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG--KGDIPTYVVGVNADAYKP--D-------- 211 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsaps--k~d~pt~V~gVN~~~y~~--~-------- 211 (442)
++-++..+ .++|+||+|+|.+.+++.++.|+++|++.|.+|++- ++++|++|+|||++.++. .
T Consensus 70 -~~~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpl_A 70 -KPTDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 11233333 289999999999999999999999999766556554 346799999999999853 1
Q ss_pred CCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccc
Q 013492 212 EPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGD 291 (442)
Q Consensus 212 ~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~ 291 (442)
.+|||||+|+|||+++.+++|+++|| |+++.|+|+|+|||+
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~g---------------------------------------i~~v~v~t~~g~SGa 185 (359)
T 4dpl_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYK---------------------------------------MDGAFITTIQSLSGA 185 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSC---------------------------------------EEEEEEEEEBCGGGG
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcC---------------------------------------CcEEEEEEEeccccC
Confidence 25999999999999999999999999 999999999999999
Q ss_pred hhhhccchhhhhhhhccccceecCCCch-hHH---HHHhccccCC----------ceeEEEEeeCcCcceeEEEEEEEcc
Q 013492 292 QRLLDASHRDLRRARAAALNIVPTSTGA-AKA---VALVLPALKG----------KLNGIALRVPTPNVSVVDLVVQVSK 357 (442)
Q Consensus 292 Q~~lD~~h~d~rr~raaa~NIIPtstGa-aka---v~kVlPeL~g----------kl~g~avRVPt~~vs~vdl~v~l~k 357 (442)
|+. ..+. +.+++|++|+.+|. .|. +.+++++|+| +++++++|||+++||++++++++++
T Consensus 186 G~~--~~~~-----~~~~~N~ipy~~~~e~k~~~Ei~kil~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~ 258 (359)
T 4dpl_A 186 GYP--GIPS-----LDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKE 258 (359)
T ss_dssp CSS--CSBH-----HHHTTCCEECCHHHHHHHHHHHHHHHTTSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESS
T ss_pred CCc--CccC-----hHHhCCeEeecCcHHHHHHHHHHHHHhhcccccccccccCCceEEEEEEecccccEEEEEEEEECC
Confidence 987 2221 45889999999876 554 6789998877 8999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCceeeccCCeeee-c---------cCCCC----cceEEeCCCCccccCCeEEEEEEecCC
Q 013492 358 KTFAEEVNAAFRESADNELKGILSVCDEPLVSV-D---------FRCSD----VSSTVDSSLTLVMGDDMVKVIAWYDNE 423 (442)
Q Consensus 358 ~~~~eeV~~a~~~aa~~~lkgil~~~~~~~VS~-D---------f~~~~----~S~~~d~~~t~~~~~~~vKv~~WyDNE 423 (442)
+++.|||+++|+++.+.+..=.|-...+|+|.+ | ..|.. ..+.| +.... .+++.+.+++=-||=
T Consensus 259 ~~t~eei~~~l~~~~~~~~~~~l~~~p~~fV~v~~~~~~P~~~~~~g~~~~~~~~~~V-gr~r~-~~~~~l~~~~~~DNL 336 (359)
T 4dpl_A 259 ETAAEKVKETLENFRGEPQDLKLPTAPSKPIIVMNEDTRPQVYFDRWAGDIPGMSVVV-GRLKQ-VNKRMIRLVSLIHNT 336 (359)
T ss_dssp CCCHHHHHHHHHTCCCHHHHTTCTTCCSCSEEEECSTTCCCHHHHTTCTTTTTCSEEE-EEEEE-EETTEEEEEEEECTT
T ss_pred CCCHHHHHHHHHHhhcccccccccCCCCccEEEcCCCCCCCHHHhhccCCCcCCeEEE-EEEEE-cCCCEEEEEEEEhhh
Confidence 999999999999987652111111122232222 0 11110 11111 00000 124557777778994
Q ss_pred -cchhhhHhHHHHHHhhc
Q 013492 424 -WGYSQRVVDLADIVANN 440 (442)
Q Consensus 424 -~GYs~Rvvdl~~~~~~~ 440 (442)
+|=|-.-|-.+++|.++
T Consensus 337 ~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpl_A 337 VRGAAGGGILAAELLVEK 354 (359)
T ss_dssp TTTTHHHHHHHHHHHHHT
T ss_pred hHhHHHHHHHHHHHHHHc
Confidence 67776666667766543
No 37
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=5.2e-34 Score=288.05 Aligned_cols=294 Identities=16% Similarity=0.224 Sum_probs=215.2
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||.| +|.+|+.++|.|.+++.+.++++.+... + ..+..+.+.|+.+.+.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-----------------------~-saG~~~~~~~~~~~~~- 55 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-----------------------R-SAGKSLKFKDQDITIE- 55 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-----------------------T-TTTCEEEETTEEEEEE-
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-----------------------c-cCCCcceecCCCceEe-
Confidence 679999999 9999999999999874334666544321 1 3455566777766664
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCC----CCCCCceeeccCccCCCCCCCeEecCCch
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG----KGDIPTYVVGVNADAYKPDEPIISNASCT 221 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsaps----k~d~pt~V~gVN~~~y~~~~~IISnaSCT 221 (442)
+.++.. | .++|+||+|||.+.+++.++.|+++|++ ||+.++ +++.|++|+|||++.++...+||+||||+
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~~--vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~ 129 (366)
T 3pwk_A 56 ETTETA--F--EGVDIALFSAGSSTSAKYAPYAVKAGVV--VVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCS 129 (366)
T ss_dssp ECCTTT--T--TTCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHH
T ss_pred eCCHHH--h--cCCCEEEECCChHhHHHHHHHHHHCCCE--EEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcH
Confidence 334443 3 3899999999999999999999999994 566665 34679999999999998667899999999
Q ss_pred hhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh-hhccchh
Q 013492 222 TNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR-LLDASHR 300 (442)
Q Consensus 222 Tn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~-~lD~~h~ 300 (442)
|||++|++++|+++|| |+++.|+|+|++||+.+ .++..+.
T Consensus 130 tt~~~l~l~pL~~~~~---------------------------------------i~~i~v~t~~~vSGAG~~~~~~l~~ 170 (366)
T 3pwk_A 130 TIQMMVALEPVRQKWG---------------------------------------LDRIIVSTYQAVSGAGMGAILETQR 170 (366)
T ss_dssp HHHHHHHHHHHHHHHC---------------------------------------CSEEEEEEEBCGGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC---------------------------------------CcEEEEEEEEeccccCcchhhHHHH
Confidence 9999999999999999 99999999999999965 4432221
Q ss_pred ---hhhh-------------h-------hccccceecCC-----CchhHHHHHhcc-------ccCCceeEEEEeeCcCc
Q 013492 301 ---DLRR-------------A-------RAAALNIVPTS-----TGAAKAVALVLP-------ALKGKLNGIALRVPTPN 345 (442)
Q Consensus 301 ---d~rr-------------~-------raaa~NIIPts-----tGaakav~kVlP-------eL~gkl~g~avRVPt~~ 345 (442)
+|+. + +.+++|++|.. +|++++++|++. ....+++.+++|||+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~r 250 (366)
T 3pwk_A 171 ELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLS 250 (366)
T ss_dssp HHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSSCBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSS
T ss_pred HHHHHhcccccccccCcccCCcccccccchhhccccceecccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhc
Confidence 2221 1 67899999995 588888876653 33457999999999999
Q ss_pred ceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccC------CeeeeccCCCCcceEEeCCCCc-cccCCeEEEEE
Q 013492 346 VSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDE------PLVSVDFRCSDVSSTVDSSLTL-VMGDDMVKVIA 418 (442)
Q Consensus 346 vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~------~~VS~Df~~~~~S~~~d~~~t~-~~~~~~vKv~~ 418 (442)
+|+..++++++++++.||++++|++++ ++ .+.++ |-. .+..|...-.+-= ... ...++.+.+++
T Consensus 251 G~~~tv~v~l~~~~s~eei~~~l~~~~-----~V-~v~~~~~~~~~P~~-~~v~gtn~~~Vgr--~r~d~~~~~~l~~~~ 321 (366)
T 3pwk_A 251 AHSESVYIETKEVAPIEEVKAAIAAFP-----GA-VLEDDVAHQIYPQA-INAVGSRDTFVGR--IRKDLDAEKGIHMWV 321 (366)
T ss_dssp CEEEEEEEECSSCCCHHHHHHHHHHST-----TE-EECCBGGGTBCCCH-HHHTTCSSEEEEE--EEECSSCTTEEEEEE
T ss_pred cEEEEEEEEECCCCCHHHHHHHHHhCC-----Cc-EEecCcccCCCCch-hHcCCCCEEEEEE--EEecCCCCCEEEEEE
Confidence 999999999999999999999999973 22 23322 211 1334444322210 000 01234466666
Q ss_pred EecCC-cchhhhHhHHHHHHhh
Q 013492 419 WYDNE-WGYSQRVVDLADIVAN 439 (442)
Q Consensus 419 WyDNE-~GYs~Rvvdl~~~~~~ 439 (442)
=-||= +|=|-.-|-.|++|.+
T Consensus 322 ~~DNL~KGAAg~AVQn~nlm~~ 343 (366)
T 3pwk_A 322 VSDNLLKGAAWNSVQIAETLHE 343 (366)
T ss_dssp EECTTTTTTHHHHHHHHHHHHH
T ss_pred EEccHHHhHHHHHHHHHHHHHH
Confidence 68994 6766666666666654
No 38
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=3e-35 Score=298.18 Aligned_cols=294 Identities=15% Similarity=0.143 Sum_probs=206.2
Q ss_pred ceeEEEEc-CChhHHHHHH-HHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEE-ECCEEEEEE
Q 013492 68 KLKVAING-FGRIGRNFLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGIS-VDGKVIQVV 144 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr-~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~-v~Gk~I~v~ 144 (442)
++||||+| +|.+|+.++| +|.+++.+.++++.+... . -| ..+. +.|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~-------------aG-----------~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-N-------------AG-----------GKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-C-------------TT-----------SBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-h-------------cC-----------CCHHHcCCCceEEE
Confidence 47999999 9999999999 888886434676655421 0 01 0000 222222222
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCCC--CC--eEe
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--EP--IIS 216 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~~--~~--IIS 216 (442)
...++.. | .++|+||+|+|.+.+++.++.|+++|+|++||++|++ ++.|++|+|||++.++.. +. +|+
T Consensus 59 ~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 2112222 3 3899999999999999999999999998899999984 467999999999998642 33 599
Q ss_pred cCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh-hh
Q 013492 217 NASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR-LL 295 (442)
Q Consensus 217 naSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~-~l 295 (442)
||||+|||++|++++|+++|| |+++.|+|+|++||+.+ .+
T Consensus 135 np~C~tt~~~l~L~pL~~~~~---------------------------------------I~~i~v~t~~avSGAG~~~~ 175 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENL---------------------------------------VDWMTAMTYQAASGAGAQNM 175 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTC---------------------------------------EEEEEEEEEBCGGGTCHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhCC---------------------------------------CCEEEEeeeecccccchhhH
Confidence 999999999999999999999 99999999999999953 22
Q ss_pred ccchhh-------------------------------------hhhhhccccceecCCC-----chhHHHH-------Hh
Q 013492 296 DASHRD-------------------------------------LRRARAAALNIVPTST-----GAAKAVA-------LV 326 (442)
Q Consensus 296 D~~h~d-------------------------------------~rr~raaa~NIIPtst-----Gaakav~-------kV 326 (442)
+..+.. -..++.+++|++|+.. |+++++. |+
T Consensus 176 ~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~ki 255 (377)
T 3uw3_A 176 RELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGDAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKI 255 (377)
T ss_dssp HHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHSTTSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHH
Confidence 221100 0123458999999963 5566644 44
Q ss_pred cccc------CCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCC-------eeeeccC
Q 013492 327 LPAL------KGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP-------LVSVDFR 393 (442)
Q Consensus 327 lPeL------~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~-------~VS~Df~ 393 (442)
+..+ .-+++.+|+|||+.++|+..++++++++++.||++++|+++. | +| .+.+++ .--.+..
T Consensus 256 lg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~~~~eei~~~l~~~~--p--~V-~v~~~~~~~~~~~P~p~~v~ 330 (377)
T 3uw3_A 256 LGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKDVPLDEINGILASAN--D--WV-KVVPNEREASMRDLSPAKVT 330 (377)
T ss_dssp HTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSCCCHHHHHHHHHTSC--S--SE-EECCSSHHHHHHHSSHHHHT
T ss_pred hcccccccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHHHHHHHhCC--C--CE-EEecCCcccccCCCCHHHhc
Confidence 5433 347999999999999999999999999999999999999872 1 22 222221 0012344
Q ss_pred CCCcceE----EeCCCCccccCCeEEEEEEecC-CcchhhhHhHHHHHHhh
Q 013492 394 CSDVSST----VDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVVDLADIVAN 439 (442)
Q Consensus 394 ~~~~S~~----~d~~~t~~~~~~~vKv~~WyDN-E~GYs~Rvvdl~~~~~~ 439 (442)
|...-.+ .|. .+++.+.+++=-|| -||=|-..+-.+.+|.+
T Consensus 331 G~n~v~VGrir~d~-----~~~~~l~~~~v~DNL~KGAAgqAvqn~nl~~~ 376 (377)
T 3uw3_A 331 GTLSVPVGRLRKLA-----MGGEYLSAFTVGDQLLWGAAEPLRRMLRILLD 376 (377)
T ss_dssp TSSCEEEEEEEECT-----TCTTEEEEEEEEETTCCCCCHHHHHHHHHHHC
T ss_pred CCCcEEEEEEEECC-----CCCCEEEEEEEehhhhHhHHHHHHHHHHHHhh
Confidence 4443222 021 12344555555788 46877777777777653
No 39
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=3.1e-33 Score=280.27 Aligned_cols=291 Identities=18% Similarity=0.257 Sum_probs=210.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+||||.| +|.+|+.++|.|.+++.+.+|++.+... + ..|..+.+.|+.+.+.. .
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-----------------------~-~aG~~~~~~~~~~~~~~-~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-----------------------R-SQGRKLAFRGQEIEVED-A 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-----------------------T-TSSCEEEETTEEEEEEE-T
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-----------------------c-cCCCceeecCCceEEEe-C
Confidence 7999999 9999999999999985344666554321 1 34566667887666643 3
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCc-cCCCCC-CCeEecCCch
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNA-DAYKPD-EPIISNASCT 221 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~-~~y~~~-~~IISnaSCT 221 (442)
++.. | .++|+||+|+|.+.+++.++.|+++|+ +||++++. +++|++|+|||+ +.++.. .+||+||||+
T Consensus 57 ~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 57 ETAD--P--SGLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp TTSC--C--TTCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred CHHH--h--ccCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 4433 4 389999999999999999999999999 56787763 467999999999 999764 6899999999
Q ss_pred hhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh-hhccchh
Q 013492 222 TNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR-LLDASHR 300 (442)
Q Consensus 222 Tn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~-~lD~~h~ 300 (442)
|||++|++++|+++|| |+++.|+|+|++||..+ .++..+.
T Consensus 131 tt~~~l~l~pL~~~~~---------------------------------------i~~i~v~t~~~~SGAG~~~~~~l~~ 171 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEAR---------------------------------------LVRLVVSSYQAVSGSGLAGVAELAE 171 (344)
T ss_dssp HHHHHHHHHHHHHHHC---------------------------------------EEEEEEEEEBCGGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC---------------------------------------CceEEEEeccCCCccChhhhHHHHH
Confidence 9999999999999999 99999999999999964 3433332
Q ss_pred hh-----------------------hhhhccccceecCC-----Cch--hHHHHH-------hccccCCceeEEEEeeCc
Q 013492 301 DL-----------------------RRARAAALNIVPTS-----TGA--AKAVAL-------VLPALKGKLNGIALRVPT 343 (442)
Q Consensus 301 d~-----------------------rr~raaa~NIIPts-----tGa--akav~k-------VlPeL~gkl~g~avRVPt 343 (442)
.. ......++|++|+. +|+ ++++++ ++..-.-+++.+|+|||+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv 251 (344)
T 3tz6_A 172 QARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPV 251 (344)
T ss_dssp HHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCCSCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSC
T ss_pred HHHhhhccccccccccccccccccccccccccccccccccccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEece
Confidence 21 12345899999984 355 666444 442112369999999999
Q ss_pred CcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCCeeeeccCCCCcceEE----eCCCCccccCCeEEEEEE
Q 013492 344 PNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSTV----DSSLTLVMGDDMVKVIAW 419 (442)
Q Consensus 344 ~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~~~----d~~~t~~~~~~~vKv~~W 419 (442)
.++|+..++++++++++.||++++|++++. | .+.+-|.. .+..|...-.+- |... -+++.+.+++=
T Consensus 252 ~rGh~~tv~v~l~~~~s~eei~~~l~~~p~-----V-~v~~~P~p-~~v~gtn~~~Vgrir~d~~~---~~~~~l~~~~~ 321 (344)
T 3tz6_A 252 FTGHSLSINAEFAQPLSPERARELLDGATG-----V-QLVDVPTP-LAAAGVDESLVGRIRRDPGV---PDGRGLALFVS 321 (344)
T ss_dssp SSCEEEEEEEEESSCCCHHHHHHHHHHCTT-----E-EECSSCCH-HHHTTCSSEEEEEEEECTTS---GGGCEEEEEEE
T ss_pred eceEEEEEEEEECCCCCHHHHHHHHhcCCC-----e-EEECCCCh-HHhCCCceEEEEEEEecCCC---CCCCEEEEEEE
Confidence 999999999999999999999999996532 2 22222211 233444432221 1100 00125667777
Q ss_pred ecCC-cchhhhHhHHHHHHhh
Q 013492 420 YDNE-WGYSQRVVDLADIVAN 439 (442)
Q Consensus 420 yDNE-~GYs~Rvvdl~~~~~~ 439 (442)
-||= ||=|-.-|-.|++|.+
T Consensus 322 ~DNL~KGAAg~AVQ~anll~~ 342 (344)
T 3tz6_A 322 GDNLRKGAALNTIQIAELLTA 342 (344)
T ss_dssp ECTTTTTTHHHHHHHHHHHTC
T ss_pred EcchhHhHHHHHHHHHHHHHh
Confidence 8994 6777666666666643
No 40
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=5.7e-35 Score=295.51 Aligned_cols=293 Identities=15% Similarity=0.139 Sum_probs=205.1
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcE-EECCEEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLR-CWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGI-SVDGKVIQVVS 145 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr-~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i-~v~Gk~I~v~~ 145 (442)
+||||+| +|.+|+.++| +|.+++.+.++++.+... + -|+ .+ .+.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~-aG~-----------~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-------------Q-IGV-----------PAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------S-TTS-----------BCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-------------c-cCc-----------CHHHhCCCceEEEe
Confidence 5899999 9999999999 998886434677666431 0 111 00 02232222322
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCCCC--C--CeEec
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYKPD--E--PIISN 217 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~~~--~--~IISn 217 (442)
..++.. | .++|+||+|+|.+.+++.++.|+++|+|++||++|++ ++.|++|+|||++.++.. + ++|+|
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 222222 2 3899999999999999999999999999899999984 367999999999998642 3 45999
Q ss_pred CCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEEEeeccccchh-hhc
Q 013492 218 ASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMTTTHSYTGDQR-LLD 296 (442)
Q Consensus 218 aSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mTTiha~Tg~Q~-~lD 296 (442)
|||||||++|++++|+++|| |+++.|+|+|++||+.+ .++
T Consensus 132 p~C~tt~~~l~L~pL~~~~~---------------------------------------I~~i~v~t~~avSGAG~~~~~ 172 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGL---------------------------------------VEWMSAMTYQAASGAGAQNMR 172 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTC---------------------------------------EEEEEEEEEBCGGGTCHHHHH
T ss_pred CChHHHHHHHHHHHHHHhCC---------------------------------------CcEEEEEeEEeccccChhhHH
Confidence 99999999999999999999 99999999999999953 222
Q ss_pred cchhh-------------------------------------hhhhhccccceecCCC-----chhHHHHH-------hc
Q 013492 297 ASHRD-------------------------------------LRRARAAALNIVPTST-----GAAKAVAL-------VL 327 (442)
Q Consensus 297 ~~h~d-------------------------------------~rr~raaa~NIIPtst-----Gaakav~k-------Vl 327 (442)
..+.. -..++.+++|++|+.. |+++++.+ ++
T Consensus 173 el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kil 252 (370)
T 3pzr_A 173 ELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGSFPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKIL 252 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTTSCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccccccccccccccccccccccccccccccccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHh
Confidence 21100 0123458999999963 55666544 44
Q ss_pred cc--cCCceeEEEEeeCcCcceeEEEEEEEccCCCHHHHHHHHHhcccccCCCceeeccCC-------eeeeccCCCCcc
Q 013492 328 PA--LKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEP-------LVSVDFRCSDVS 398 (442)
Q Consensus 328 Pe--L~gkl~g~avRVPt~~vs~vdl~v~l~k~~~~eeV~~a~~~aa~~~lkgil~~~~~~-------~VS~Df~~~~~S 398 (442)
.. -.-+++.+|+|||+.++|+..++++++++++.||++++|+++. | ++ .+.+++ .--.+..|....
T Consensus 253 g~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~~~~~ei~~~l~~~~--p--~V-~v~~~~~~~~~~~P~p~~v~G~n~v 327 (370)
T 3pzr_A 253 GLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQNIPLDEIEEMIATHN--D--WV-KVIPNERDITARELTPAKVTGTLSV 327 (370)
T ss_dssp TCTTSCCCEECCCCEESCSSEEEEEEEEEESSCCCHHHHHHHHHTSC--S--SE-EECCSCHHHHHHHSSHHHHTTSCCE
T ss_pred CccCCCceEEEEeEEecccceEEEEEEEEeCCCCCHHHHHHHHHhCC--C--CE-EEecCCcccccCCCCHHHhcCCccE
Confidence 42 1336999999999999999999999999999999999999872 1 22 232221 001234444432
Q ss_pred eE----EeCCCCccccCCeEEEEEEecC-CcchhhhHhHHHHHHhh
Q 013492 399 ST----VDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVVDLADIVAN 439 (442)
Q Consensus 399 ~~----~d~~~t~~~~~~~vKv~~WyDN-E~GYs~Rvvdl~~~~~~ 439 (442)
.+ .|. .+++.+.+++=-|| -||=|-..+-.+.+|.+
T Consensus 328 ~VGrir~d~-----~~~~~l~~~~v~DNL~KGAAgqAvQn~Nl~~~ 368 (370)
T 3pzr_A 328 PVGRLRKMA-----MGDDFLNAFTVGDQLLWGAAEPLRRTLRIILA 368 (370)
T ss_dssp EEEEEEEET-----TEEEEEEEEEEEETTTTTTHHHHHHHHHHHHH
T ss_pred EEEEEEECC-----CCCCEEEEEEEehhhhHhHHHHHHHHHHHHHh
Confidence 21 011 11233445455788 47888888877777754
No 41
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=7.6e-33 Score=276.59 Aligned_cols=293 Identities=13% Similarity=0.099 Sum_probs=204.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+||+|.| +|.+|+.+++.|.+++ ++|++++-...+.+.. --++...|..|.+.. .+.+....
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p--~~el~~l~s~~~~~sa--Gk~~~~~~p~~~~~~-------------~~~v~~~~ 67 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHP--HMNITALTVSAQSNDA--GKLISDLHPQLKGIV-------------ELPLQPMS 67 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCT--TEEEEEEEEETTCTTT--TSBHHHHCGGGTTTC-------------CCBEEEES
T ss_pred eEEEEECCCChHHHHHHHHHHhCC--CCcEEEEEecCchhhc--CCchHHhCccccCcc-------------ceeEeccC
Confidence 7999999 9999999999999875 5999888542100010 000111121121100 11121100
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCC--CC-CCC---------------ceee---ccCcc
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG--KG-DIP---------------TYVV---GVNAD 206 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsaps--k~-d~p---------------t~V~---gVN~~ 206 (442)
++..+ . .++|+||+|+|.+.+++.++.|+++|+|.|-+|++- ++ ++| ++|+ |+|.+
T Consensus 68 ~~~~~--~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~ 144 (337)
T 3dr3_A 68 DISEF--S-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGN 144 (337)
T ss_dssp SGGGT--C-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCH
T ss_pred CHHHH--h-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHH
Confidence 23322 1 279999999999999999999999999644444432 12 222 2344 55999
Q ss_pred CCCCCCCeEecCCchhhhhHHHHHHHHH--hhccchhhhcccccccchhhhhhhhccccccccccccccccceeeE-EEE
Q 013492 207 AYKPDEPIISNASCTTNCLAPFVKVLDQ--KFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKG-TMT 283 (442)
Q Consensus 207 ~y~~~~~IISnaSCTTn~Lap~lkvL~~--~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g-~mT 283 (442)
.++. .+||+||+|+|||+++.+++|++ .|| ++++ .|+
T Consensus 145 ~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~---------------------------------------~~~i~~v~ 184 (337)
T 3dr3_A 145 KLKE-ANLIAVPGCYPTAAQLALKPLIDADLLD---------------------------------------LNQWPVIN 184 (337)
T ss_dssp HHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBC---------------------------------------TTSCCEEE
T ss_pred HhCC-CCEEecCChHHHHHHHHHHHHHHcCccC---------------------------------------CCceEEEE
Confidence 9874 68999999999999999999999 588 8899 999
Q ss_pred Eeeccccch-hhhccchhhhhhhhccccceecCCCchhHHHHHhccccCC----ceeEEEEeeCcCcceeEEEEEEEccC
Q 013492 284 TTHSYTGDQ-RLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPALKG----KLNGIALRVPTPNVSVVDLVVQVSKK 358 (442)
Q Consensus 284 Tiha~Tg~Q-~~lD~~h~d~rr~raaa~NIIPtstGaakav~kVlPeL~g----kl~g~avRVPt~~vs~vdl~v~l~k~ 358 (442)
|+|+|||++ +.+|..|.+.| |++|+.++. .+++||+++ +++++++|||+++||+++++++++++
T Consensus 185 t~~g~SGaG~~~~~~~~~~~~-------n~~py~~~~----h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~ 253 (337)
T 3dr3_A 185 ATSGVSGAGRKAAISNSFCEV-------SLQPYGVFT----HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSG 253 (337)
T ss_dssp EEECGGGGCSCCCSTTSGGGC-------SEEECSTTT----CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTT
T ss_pred EeeccccCCcccccccccccc-------ceEccCccc----ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCC
Confidence 999999996 56676666644 999999886 357888776 89999999999999999999999999
Q ss_pred CCHHHHHHHHHhc-ccccCCCceeeccCCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecC-CcchhhhHhHHHHH
Q 013492 359 TFAEEVNAAFRES-ADNELKGILSVCDEPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDN-EWGYSQRVVDLADI 436 (442)
Q Consensus 359 ~~~eeV~~a~~~a-a~~~lkgil~~~~~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDN-E~GYs~Rvvdl~~~ 436 (442)
++.|||+++|+++ ++.++--++.-.+ |.. .+..|+.+-.+- ...+++.+.+++..|| -+|=|-.-|-.+++
T Consensus 254 ~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~v~gtn~~~ig-----~~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nl 326 (337)
T 3dr3_A 254 VTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KNVVGLPFCDIG-----FAVQGEHLIIVATEDNLLKGAAAQAVQCANI 326 (337)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GGTTTSSCEEEE-----EEEETTEEEEEEEECTTTTTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HHhCCCCcEEEE-----EEEeCCEEEEEEEechHHHHHHHHHHHHHHH
Confidence 9999999999986 3333322222111 322 255555543221 1111456778888999 67888887777777
Q ss_pred Hhh
Q 013492 437 VAN 439 (442)
Q Consensus 437 ~~~ 439 (442)
|..
T Consensus 327 m~g 329 (337)
T 3dr3_A 327 RFG 329 (337)
T ss_dssp HHT
T ss_pred HhC
Confidence 743
No 42
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.97 E-value=1.7e-31 Score=267.88 Aligned_cols=296 Identities=15% Similarity=0.051 Sum_probs=207.2
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCC-CC--CcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~-~~--~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
++||+|+| +|+||+.++|.|.+++ .+ .+|+++++...+.. .++++.|+.|.+..+ + .+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~ag-----k~~~~~~~~l~~~~~------~-------~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAG-----STLGEHHPHLTPLAH------R-------VV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTT-----SBGGGTCTTCGGGTT------C-------BC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCC-----Cchhhhcccccccce------e-------ee
Confidence 37999999 9999999999999874 00 58999998632221 124666666543111 1 11
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC--C-C-------------CCceeecc--Cc
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK--G-D-------------IPTYVVGV--NA 205 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk--~-d-------------~pt~V~gV--N~ 205 (442)
. +.++.. |. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. + + .|..|+|+ |.
T Consensus 71 ~-~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 E-PTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp E-ECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred c-cCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 1 112222 54 899999999999999999999 99986555555543 2 2 27777788 99
Q ss_pred cCCCCCCCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhcccccccccccccccccee-eEEEEE
Q 013492 206 DAYKPDEPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGII-KGTMTT 284 (442)
Q Consensus 206 ~~y~~~~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~-~g~mTT 284 (442)
+.++. .+||+||+|+|+|+++.+++|+++|+ |+ +++|+|
T Consensus 145 ~~i~~-~~iIanPgC~tt~~~lal~PL~~~~~---------------------------------------i~~~i~v~t 184 (352)
T 2nqt_A 145 DQLRG-TRRIAVPGCYPTAALLALFPALAADL---------------------------------------IEPAVTVVA 184 (352)
T ss_dssp HHHTT-CSEEECCCHHHHHHHHHHHHHHHTTC---------------------------------------SCSEEEEEE
T ss_pred HHHhc-CCEEEcCCHHHHHHHHHHHHHHHcCC---------------------------------------CcceEEEEE
Confidence 99874 58999999999999999999999999 98 899999
Q ss_pred eeccccc-hhhhccchhhhhhhhccccceec-CCCchhHHH----HHhccccCCceeEEEEeeCcCcceeEEEEEEEccC
Q 013492 285 THSYTGD-QRLLDASHRDLRRARAAALNIVP-TSTGAAKAV----ALVLPALKGKLNGIALRVPTPNVSVVDLVVQVSKK 358 (442)
Q Consensus 285 iha~Tg~-Q~~lD~~h~d~rr~raaa~NIIP-tstGaakav----~kVlPeL~gkl~g~avRVPt~~vs~vdl~v~l~k~ 358 (442)
+|++||+ |+..|..|.+.|+.+..++|++| +. ...++ .+++. .+++++++++|||+++||+++++++++++
T Consensus 185 ~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~h~--h~pEi~~e~~ki~~-~~~~v~ft~~rvP~~rG~~~ti~~~l~~~ 261 (352)
T 2nqt_A 185 VSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHR--HTPEIAQGLRAVTD-RDVSVSFTPVLIPASRGILATCTARTRSP 261 (352)
T ss_dssp EECGGGGCSSCCGGGSHHHHTTCCEECSTTTTST--THHHHHHHHHTTCS-SCCEEEEEEEECSCSSCEEEEEEEECCSC
T ss_pred EeccccCCccccccccHHHHhhhcccccCCCcce--ecHHHHHHHHHHhC-CCCCEEEEEEEEccccEEEEEEEEEECCC
Confidence 9999999 78888888888988888999998 32 11112 33333 26789999999999999999999999988
Q ss_pred CCHHHHHHHHHhcccccCCCceeecc---CCeeeeccCCCCcceEEeCCCCccccCCeEEEEEEecCC-cchhhhHhHHH
Q 013492 359 TFAEEVNAAFRESADNELKGILSVCD---EPLVSVDFRCSDVSSTVDSSLTLVMGDDMVKVIAWYDNE-WGYSQRVVDLA 434 (442)
Q Consensus 359 ~~~eeV~~a~~~aa~~~lkgil~~~~---~~~VS~Df~~~~~S~~~d~~~t~~~~~~~vKv~~WyDNE-~GYs~Rvvdl~ 434 (442)
.|||+++|+++-+++ .+| .+.+ -|-. .+..|+.+-.+ +...--.++.+.+++=-||= +|=|-.-|-.+
T Consensus 262 --~~ei~~~~~~~y~~~-~~V-~v~~~~~~p~~-~~v~g~n~~~i---g~~~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~ 333 (352)
T 2nqt_A 262 --LSQLRAAYEKAYHAE-PFI-YLMPEGQLPRT-GAVIGSNAAHI---AVAVDEDAQTFVAIAAIDNLVKGTAGAAVQSM 333 (352)
T ss_dssp --HHHHHHHHHHHHTTC-TTE-EECCTTCCCCG-GGTTTSSCEEE---EEEEETTTTEEEEEEEECTTTTTTHHHHHHHH
T ss_pred --HHHHHHHHHHhhCCC-CCE-EEeCCCCCcCh-HHhcCCcEEEE---EEEEeCCCCEEEEEEEEcchhHhHHHHHHHHH
Confidence 999999999863321 122 2221 1211 24445443332 11000122446666667884 56666656556
Q ss_pred HHHh
Q 013492 435 DIVA 438 (442)
Q Consensus 435 ~~~~ 438 (442)
++|.
T Consensus 334 nl~~ 337 (352)
T 2nqt_A 334 NLAL 337 (352)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5554
No 43
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.97 E-value=9e-32 Score=272.97 Aligned_cols=241 Identities=22% Similarity=0.277 Sum_probs=178.7
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecC---CChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEE
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDT---GGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQ 142 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~---~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~ 142 (442)
+++||||.| +|.+|+.++|.|.+++ .+||+.+-.. .+-+ +... | +|... ..|..+++.+.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp--~~el~~l~aS~~saGk~-~~~~------~-~~~~~------~~~p~~~~~~~ 81 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP--EFEIHALGASSRSAGKK-YKDA------A-SWKQT------ETLPETEQDIV 81 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS--SEEEEEEEECTTTTTSB-HHHH------C-CCCCS------SCCCHHHHTCB
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC--CceEEEeeccccccCCC-HHHh------c-ccccc------cccccccccce
Confidence 368999999 9999999999998885 5899877421 1111 1111 1 11100 00000001111
Q ss_pred EEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC----CCCCceeeccCccCCC---------
Q 013492 143 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK----GDIPTYVVGVNADAYK--------- 209 (442)
Q Consensus 143 v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk----~d~pt~V~gVN~~~y~--------- 209 (442)
+ ++-++.+ .| .++|+||+|+|.+.+++.++.++++|++ ||+.++. +++|++|++||++.|.
T Consensus 82 v-~~~~~~~-~~--~~~Dvvf~alp~~~s~~~~~~~~~~G~~--VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~ 155 (381)
T 3hsk_A 82 V-QECKPEG-NF--LECDVVFSGLDADVAGDIEKSFVEAGLA--VVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQA 155 (381)
T ss_dssp C-EESSSCT-TG--GGCSEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHH
T ss_pred E-EeCchhh-hc--ccCCEEEECCChhHHHHHHHHHHhCCCE--EEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhh
Confidence 2 2223331 24 3899999999999999999999999995 5666552 4679999999999885
Q ss_pred ------CCCCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhccccccccccccccccceeeEEEE
Q 013492 210 ------PDEPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGIIKGTMT 283 (442)
Q Consensus 210 ------~~~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~g~mT 283 (442)
...+||+||+|+|+|+++.|++|+++|| | |+++.|+
T Consensus 156 ~~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~g-----l---------------------------------I~~v~v~ 197 (381)
T 3hsk_A 156 VSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFG-----P---------------------------------IDALTTT 197 (381)
T ss_dssp HHTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHC-----C---------------------------------EEEEEEE
T ss_pred cccccccCCcEEECCCcHHHHHHHHHHHHHHhcC-----C---------------------------------ceEEEEE
Confidence 2346999999999999999999999999 3 7889999
Q ss_pred Eeeccccchhh-hccchhhhhhhhccccceecCCCch-hHH---HHHhccccCC-------------ceeEEEEeeCcCc
Q 013492 284 TTHSYTGDQRL-LDASHRDLRRARAAALNIVPTSTGA-AKA---VALVLPALKG-------------KLNGIALRVPTPN 345 (442)
Q Consensus 284 Tiha~Tg~Q~~-lD~~h~d~rr~raaa~NIIPtstGa-aka---v~kVlPeL~g-------------kl~g~avRVPt~~ 345 (442)
|+|++||+++. .... +.++.|++|+.++. .|. +.++++.++| +++++|+|||+++
T Consensus 198 t~~gvSGAG~~~~~~~-------~~~~~N~~Py~~~~e~k~~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~r 270 (381)
T 3hsk_A 198 TLQAISGAGFSPGVSG-------MDILDNIVPYISGEEDKLEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVID 270 (381)
T ss_dssp EEBCCCC------CCH-------HHHTTCCBCCCTTHHHHHHHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSS
T ss_pred EeeccCCCCccCCcch-------hhhhcChhhcccchHHHHHHHHHHHhhhcccccccccccccCCCceEEEEEEeceec
Confidence 99999999983 3222 25789999999876 444 5678887776 8999999999999
Q ss_pred ceeEEEEEEEcc--CCCHHHHHHHHHhcccc
Q 013492 346 VSVVDLVVQVSK--KTFAEEVNAAFRESADN 374 (442)
Q Consensus 346 vs~vdl~v~l~k--~~~~eeV~~a~~~aa~~ 374 (442)
||++++++++++ +++.|||+++|+++..+
T Consensus 271 G~~~tv~v~l~~~~~~t~eei~~~l~~~y~~ 301 (381)
T 3hsk_A 271 GHTECISLRFANRPAPSVEDVKQCLREYECA 301 (381)
T ss_dssp CCEEEEEEEESSSSCCCHHHHHHHHHHCBCH
T ss_pred cEEEEEEEEeCCCCCCCHHHHHHHHHHhhcc
Confidence 999999999999 99999999999998754
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.92 E-value=1.2e-24 Score=218.95 Aligned_cols=228 Identities=12% Similarity=0.073 Sum_probs=171.6
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||.| +|.+|+.++|+|.+++ .+||+.+....+. -.+|++.|+.|..+ +.+ .+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP--~~el~~l~S~~~a-----G~~~~~~~p~~~~~---------------l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHP--EAKITYLSSRTYA-----GKKLEEIFPSTLEN---------------SIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT--TEEEEEEECSTTT-----TSBHHHHCGGGCCC---------------CBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCC--CcEEEEEeCcccc-----cCChHHhChhhccC---------------ceE-Ee
Confidence 48999999 9999999999999985 5999998863111 12334444443311 111 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC---C--C-----------C------CceeeccC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK---G--D-----------I------PTYVVGVN 204 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk---~--d-----------~------pt~V~gVN 204 (442)
.++.++ | .++|+||.|+|...+++.++.+ +|+ +||++++. + + . |..++|+|
T Consensus 70 ~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223222 2 3799999999999999999887 677 68999874 2 2 1 56677779
Q ss_pred ccCCCCCCCeEecCCchhhhhHHHHHHHHHhhccchhhhcccccccchhhhhhhhcccccccccccccccccee--eEEE
Q 013492 205 ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGKYQKHLQKSSLSLCSDIIQLRKTQKVTQLNDRIFPMCAGII--KGTM 282 (442)
Q Consensus 205 ~~~y~~~~~IISnaSCTTn~Lap~lkvL~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~--~g~m 282 (442)
.+.++. .+||+||+|+|+|+++.|++|+++++ |+ +..+
T Consensus 143 ~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~---------------------------------------i~~~~iiv 182 (351)
T 1vkn_A 143 REEIKN-AQVVGNPGCYPTSVILALAPALKHNL---------------------------------------VDPETILV 182 (351)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTC---------------------------------------SCCSEEEE
T ss_pred HHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCC---------------------------------------CCCCEEEE
Confidence 998875 58999999999999999999999998 87 8999
Q ss_pred EEeeccccchh-hhccchhhhhhhhccccceecCCCchhHHHHHhcccc------CCceeEEEEeeCcCcceeEEEEEEE
Q 013492 283 TTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPAL------KGKLNGIALRVPTPNVSVVDLVVQV 355 (442)
Q Consensus 283 TTiha~Tg~Q~-~lD~~h~d~rr~raaa~NIIPtstGaakav~kVlPeL------~gkl~g~avRVPt~~vs~vdl~v~l 355 (442)
+|+|++||+++ ..+..|.. .+..|+.|...+.-+.+..+..+| ..+++.+++|||+.+||+..+++++
T Consensus 183 ~t~sgvSGAG~~~~~~~~~~-----e~~~n~~~y~~~~h~h~pEi~~el~~i~~~~~~v~ftp~rvPv~rG~~~tv~v~l 257 (351)
T 1vkn_A 183 DAKSGVSGAGRKEKVDYLFS-----EVNESLRPYNVAKHRHVPEMEQELGKISGKKVNVVFTPHLVPMTRGILSTIYVKT 257 (351)
T ss_dssp EEEEEGGGGCSCCSGGGBHH-----HHTTCCEECSCSCCTHHHHHHHHHHHHHTSCCEEEEEEEEESSSSCEEEEEEEEC
T ss_pred EEEeeccccCcccccccchh-----HHhcccccCCccccccHHHHHHHHHHhhCCCCCEEEEEEEeccccEEEEEEEEEE
Confidence 99999999987 55555432 235688888766433333333333 2479999999999999999999999
Q ss_pred ccCCCHHHHHHHHHhcc
Q 013492 356 SKKTFAEEVNAAFRESA 372 (442)
Q Consensus 356 ~k~~~~eeV~~a~~~aa 372 (442)
+ ++.||++++|+++-
T Consensus 258 ~--~~~eei~~~l~~~Y 272 (351)
T 1vkn_A 258 D--KSLEEIHEAYLEFY 272 (351)
T ss_dssp S--SCHHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHhh
Confidence 8 89999999999753
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.37 E-value=4e-06 Score=82.56 Aligned_cols=137 Identities=23% Similarity=0.231 Sum_probs=85.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHh-CCCCCcEEEEEecCCChhh-hhhhcccCcccccC--CcceeeecCCcEEECCEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAINDTGGVKQ-ASHLLKYDSTLGIF--EADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~-~~~~~~evvaInd~~~~~~-la~LlkyDSt~g~f--~~~v~~~~~~~i~v~Gk~I~v 143 (442)
++||||+|+|.||+.+++.+.. . +.++++++.|.. ++. ...+. ..||.- ..+++ .+
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~--~~~elvav~d~~-~~~~~~~~a---~~~g~~~~~~~~e--------------~l 63 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNA--KYLEMGAMVGID-AASDGLARA---QRMGVTTTYAGVE--------------GL 63 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC--SSEEEEEEECSC-TTCHHHHHH---HHTTCCEESSHHH--------------HH
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhC--cCeEEEEEEeCC-hhhhHHHHH---HHcCCCcccCCHH--------------HH
Confidence 5899999999999999999966 4 359999999853 211 00111 112210 00000 00
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHc--CCCeEEEeC-CCCCCCCceeeccCccCCCCC--CCeEecC
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQA--GAKKVLITA-PGKGDIPTYVVGVNADAYKPD--EPIISNA 218 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~a--GAkkVIIsa-psk~d~pt~V~gVN~~~y~~~--~~IISna 218 (442)
+. + ..| .++|+||+|||.....+.+...+++ |. .||+. |.. -.|..++++|.+..... ..+++++
T Consensus 64 l~--~---~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~-~g~~~~p~v~~~~~~~~~~~~lva~~ 133 (312)
T 1nvm_B 64 IK--L---PEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAA-IGPYCVPVVNLEEHLGKLNVNMVTCG 133 (312)
T ss_dssp HH--S---GGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTC-SSCBCCHHHHTTTTTTCSEEECCCHH
T ss_pred Hh--c---cCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCccc-ccccccCccCHHHHHhccCCcEEEeC
Confidence 00 0 001 3789999999988888889888988 76 44543 322 23666677887776432 2467655
Q ss_pred CchhhhhHHHHHHHHHhhc
Q 013492 219 SCTTNCLAPFVKVLDQKFG 237 (442)
Q Consensus 219 SCTTn~Lap~lkvL~~~fG 237 (442)
.| +..|++..+.+.|.
T Consensus 134 g~---~~ipl~~a~~~~~~ 149 (312)
T 1nvm_B 134 GQ---ATIPMVAAVSRVAK 149 (312)
T ss_dssp HH---HHHHHHHHHHTTSC
T ss_pred Cc---ccchHHHHhhhhcc
Confidence 55 45688888877776
No 46
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.74 E-value=5.6e-05 Score=73.17 Aligned_cols=98 Identities=22% Similarity=0.236 Sum_probs=64.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||+|+|.||+.+++.+...+..+++|+||.|. +.+....+. ..||.- + ++.
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a---~~~~~~----~---------------~~~- 56 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFA---QKHDIP----K---------------AYG- 56 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHH---HHHTCS----C---------------EES-
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHH---HHcCCC----c---------------ccC-
Confidence 6799999999999999999987654335899999986 333222221 112210 0 000
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ -.+..+|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 -~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 57 -SYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp -SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 11111 01226899999999999999999999999 56777544
No 47
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.64 E-value=5.9e-05 Score=73.69 Aligned_cols=88 Identities=18% Similarity=0.190 Sum_probs=61.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|++|+.+++.+...+ +++++++.|....+. +. + | +.++ .
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~--~~elvav~d~~~~~~----~~----~------------------g--v~~~--~ 50 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQP--DMDLVGIFSRRATLD----TK----T------------------P--VFDV--A 50 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCS--SEEEEEEEESSSCCS----SS----S------------------C--EEEG--G
T ss_pred CCEEEEEeecHHHHHHHHHHhcCC--CCEEEEEEcCCHHHh----hc----C------------------C--Ccee--C
Confidence 589999999999999999998753 599999988522110 00 1 1 1111 2
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++- .++|+||+||+.....+.+...+++|. .||++.|
T Consensus 51 d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp 90 (320)
T 1f06_A 51 DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYD 90 (320)
T ss_dssp GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCC
T ss_pred CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCC
Confidence 233332 378999999999888888888998886 4666544
No 48
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.58 E-value=0.00012 Score=70.56 Aligned_cols=94 Identities=22% Similarity=0.293 Sum_probs=63.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||+|+|.||+..++.+...+ .++|++|.|. +.+....+.+ .||. . +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~~~---~~~~--------------------~-~-- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNA--DARLVAVADA-FPAAAEAIAG---AYGC--------------------E-V-- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEECS-SHHHHHHHHH---HTTC--------------------E-E--
T ss_pred CceEEEEECCCHHHHHHHHHHhhCC--CcEEEEEECC-CHHHHHHHHH---HhCC--------------------C-c--
Confidence 6799999999999999999998764 4999999986 3333222211 1110 0 0
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.++.++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 011111 01226899999999999889999999998 55777544
No 49
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.57 E-value=0.00012 Score=71.12 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=63.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||+|+|.||+..++.+...+ .+++++|.|.. .+....+. ..||. .+ ++.
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~--~~~l~av~d~~-~~~~~~~~---~~~~~----~~---------------~~~- 54 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMID--DAILYAISDVR-EDRLREMK---EKLGV----EK---------------AYK- 54 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGST--TEEEEEEECSC-HHHHHHHH---HHHTC----SE---------------EES-
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCC--CcEEEEEECCC-HHHHHHHH---HHhCC----Cc---------------eeC-
Confidence 6789999999999999999987753 59999999863 33322221 11221 00 110
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 55 -DPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp -SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred -CHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 11111 01126899999999998888899999999 45777554
No 50
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.53 E-value=0.00016 Score=70.24 Aligned_cols=97 Identities=24% Similarity=0.312 Sum_probs=63.8
Q ss_pred CceeEEEEcCChhHHHHHHHHH-hCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~-~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||+|+|.||+..++.+. .. +.++|++|.|. +.+....+. ..||. .++ ++.
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~--~~~~l~av~d~-~~~~~~~~~---~~~g~---~~~---------------~~~ 56 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKL--SGAEIVAVTDV-NQEAAQKVV---EQYQL---NAT---------------VYP 56 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTC--SSEEEEEEECS-SHHHHHHHH---HHTTC---CCE---------------EES
T ss_pred CeEEEEEECccHHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHH---HHhCC---CCe---------------eeC
Confidence 6789999999999999999998 44 35999999986 333222221 11221 001 111
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ -.+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 --~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 57 --NDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp --SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred --CHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 11111 01126899999999999999999999999 45776444
No 51
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.47 E-value=0.00019 Score=69.66 Aligned_cols=86 Identities=20% Similarity=0.211 Sum_probs=57.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|+||+.+++.+...+ +++|++|.|.. ++.+.. +|. . + ..+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~--~~elvav~d~~-~~~~~~-------~g~-----~--------~-----~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAP--DFEIAGIVRRN-PAEVPF-------ELQ-----P--------F-----RVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEECC---------------CCT-----T--------S-----CEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcCC--CCEEEEEEcCC-HHHHHH-------cCC-----C--------c-----CCH--H
Confidence 589999999999999999998754 59999999852 221110 111 0 0 001 1
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..+. .++|+|+.||+.....+.+...+++|. .||.
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ 94 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTAD 94 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEE
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEE
Confidence 12112 278999999999988899998998886 3544
No 52
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.47 E-value=0.00036 Score=68.08 Aligned_cols=92 Identities=26% Similarity=0.400 Sum_probs=61.6
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+. .++++...+ .++|+||.|. +++... -+| + . ++ ++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~--~~~l~av~d~-~~~~~~--~~~----~---~-~~---------------~~-- 56 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTP--GLELAGVSSS-DASKVH--ADW----P---A-IP---------------VV-- 56 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTST--TEEEEEEECS-CHHHHH--TTC----S---S-CC---------------EE--
T ss_pred CceEEEECCCHHHHHHHHHHHhhCC--CcEEEEEECC-CHHHHH--hhC----C---C-Cc---------------eE--
Confidence 589999999999997 778877653 4999999986 333221 111 0 0 01 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ -.+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 011111 01226899999999999999999999999 55776444
No 53
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.41 E-value=0.00027 Score=69.02 Aligned_cols=94 Identities=26% Similarity=0.248 Sum_probs=60.9
Q ss_pred CceeEEEEcCChhHH-HHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr-~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||+|+|.||+ ..++++... +.++|+||.|....+.++. .+|... + .++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~~~a~------~~~~~~--~---------------~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR--ETLEVKTIFDLHVNEKAAA------PFKEKG--V---------------NFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECTTCCHHHHH------HHHTTT--C---------------EEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC--CCeEEEEEECCCHHHHHHH------hhCCCC--C---------------eEE-
Confidence 679999999999999 567777654 3599999998631221111 111100 0 111
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
.+..++ ..+.++|+|+-||+.....+.+...+++| |.|++-
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~E 95 (349)
T 3i23_A 55 -ADLNEL-LTDPEIELITICTPAHTHYDLAKQAILAG-KSVIVE 95 (349)
T ss_dssp -SCTHHH-HSCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEC
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEE
Confidence 122221 11236899999999998889999999999 557663
No 54
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.38 E-value=0.00044 Score=67.88 Aligned_cols=92 Identities=26% Similarity=0.313 Sum_probs=61.5
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+. .++++... +.++|+||.|.. .+.++. +| + .++ ++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~-~~~~~~--~~----~----~~~---------------~~-- 54 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVL--DEYQISKIMTSR-TEEVKR--DF----P----DAE---------------VV-- 54 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECSC-HHHHHH--HC----T----TSE---------------EE--
T ss_pred cceEEEEccCHHHHHHHHHHHhhC--CCeEEEEEEcCC-HHHHHh--hC----C----CCc---------------eE--
Confidence 489999999999997 67777655 359999999863 332221 11 0 011 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 112111 11237899999999999999999999999 45776444
No 55
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.36 E-value=0.00036 Score=68.61 Aligned_cols=98 Identities=29% Similarity=0.323 Sum_probs=63.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||+|+|.||+..++.+..+. +.++|++|.|.. .+.+..+. ..||. .++ ++.
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~-~~~~lvav~d~~-~~~~~~~a---~~~g~---~~~---------------~~~- 77 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTV-SGVEVVAVCDIV-AGRAQAAL---DKYAI---EAK---------------DYN- 77 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTC-TTEEEEEEECSS-TTHHHHHH---HHHTC---CCE---------------EES-
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhC-CCcEEEEEEeCC-HHHHHHHH---HHhCC---CCe---------------eeC-
Confidence 4689999999999999999998331 359999999863 22211111 11221 001 111
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ -.+..+|+|+-||+.....+.+...+++| |.|++--|
T Consensus 78 -~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 78 -DYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp -SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred -CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 11111 01126899999999999999999999999 56776544
No 56
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.33 E-value=0.00052 Score=67.65 Aligned_cols=93 Identities=18% Similarity=0.301 Sum_probs=60.9
Q ss_pred CceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
.++||||+|+|.||+. .++++...+ .++|+||.|.. .+.+.. +| + . ++ ++.
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~--~~~l~av~d~~-~~~~~~--~~----~---~-~~---------------~~~ 57 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVP--GLNLAFVASRD-EEKVKR--DL----P---D-VT---------------VIA 57 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTST--TEEEEEEECSC-HHHHHH--HC----T---T-SE---------------EES
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCC--CeEEEEEEcCC-HHHHHh--hC----C---C-Cc---------------EEC
Confidence 3589999999999997 677776653 59999999863 332221 11 0 0 01 111
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ -.+..+|+|+-||+.....+.+...+++| |.|++--|
T Consensus 58 --~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 58 --SPEAA-VQHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp --CHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred --CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 11111 01236899999999999999999999999 45666433
No 57
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.31 E-value=0.00054 Score=66.03 Aligned_cols=92 Identities=22% Similarity=0.241 Sum_probs=59.9
Q ss_pred ceeEEEEcCChhHHHHHHHHH-hCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~-~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+..++.+. ..+ .+++++|.|.. .+....+.+ .+|. . + ++.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~--~~~~vav~d~~-~~~~~~~a~---~~g~---~-~---------------~~~- 61 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQ--GVKLVAACALD-SNQLEWAKN---ELGV---E-T---------------TYT- 61 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCS--SEEEEEEECSC-HHHHHHHHH---TTCC---S-E---------------EES-
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCC--CcEEEEEecCC-HHHHHHHHH---HhCC---C-c---------------ccC-
Confidence 589999999999999999987 543 49999999863 332211110 1111 0 0 110
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..++ ..+.++|+|+.||+.....+.+...+++| |.|++
T Consensus 62 -~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~ 100 (346)
T 3cea_A 62 -NYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFC 100 (346)
T ss_dssp -CHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEE
T ss_pred -CHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEE
Confidence 11111 01126899999999988888888899998 44665
No 58
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.29 E-value=0.00042 Score=67.15 Aligned_cols=96 Identities=21% Similarity=0.190 Sum_probs=63.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
+++||||+|+|.||+.+++.+...+ .++|++|.|.. .+....+. ..||.- + ++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~--~~~l~av~d~~-~~~~~~~~---~~~~~~----~---------------~~-- 56 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESA--QAEVRGIASRR-LENAQKMA---KELAIP----V---------------AY-- 56 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSS--SEEEEEEBCSS-SHHHHHHH---HHTTCC----C---------------CB--
T ss_pred CeEEEEEECchHHHHHHHHHHHhCC--CcEEEEEEeCC-HHHHHHHH---HHcCCC----c---------------ee--
Confidence 3589999999999999999998764 49999999863 22222221 112210 0 00
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ -.+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 99 (330)
T 3e9m_A 57 GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKP 99 (330)
T ss_dssp SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSS
T ss_pred CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCC
Confidence 011110 011268999999999988899999999994 5777544
No 59
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.27 E-value=7.6e-05 Score=73.45 Aligned_cols=97 Identities=18% Similarity=0.241 Sum_probs=59.7
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
+++||+|+| +|++||.+++++.+.+ +++||++-|..+... ...|. |.+.+ .+..++ .++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~--~~eLvg~vd~~~~~~----~G~d~--gel~G----~~~~gv-------~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRK--DVELCAVLVRKGSSF----VDKDA--SILIG----SDFLGV-------RIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCS--SEEEEEEBCCTTCTT----TTSBG--GGGTT----CSCCSC-------BCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEecCCccc----cccch--HHhhc----cCcCCc-------eee-
Confidence 468999999 9999999999998764 599999988532210 11111 11100 001111 111
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
.|..++- .++|+|||+|......+.+...+++|.. +||
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 1222211 1689999999766666777888889986 555
No 60
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.27 E-value=0.00056 Score=66.30 Aligned_cols=94 Identities=24% Similarity=0.359 Sum_probs=63.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|.||+.+++.+...+ .++|++|.|. +.+.+..+.+ .|| ++ ++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~g-----~~---------------~~--~ 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANP--DLELVVIADP-FIEGAQRLAE---ANG-----AE---------------AV--A 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEECS-SHHHHHHHHH---TTT-----CE---------------EE--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhCC--CcEEEEEECC-CHHHHHHHHH---HcC-----Cc---------------ee--C
Confidence 489999999999999999998764 4999999986 3332222211 111 01 11 1
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ ..+..+|+|+-||+.....+.+...+++|. .|++.-|
T Consensus 56 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 97 (344)
T 3euw_A 56 SPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKP 97 (344)
T ss_dssp SHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECC
Confidence 11111 112378999999999998999999999994 5777554
No 61
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.26 E-value=0.00042 Score=66.99 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=61.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|.||+.+++.+...+ .+++++|.|.. .+....+ -..||.- ..+ .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~--~~~~~av~d~~-~~~~~~~---a~~~~~~-------------------~~~--~ 57 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAG--NGEVVAVSSRT-LESAQAF---ANKYHLP-------------------KAY--D 57 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHC--SEEEEEEECSC-SSTTCC------CCCCS-------------------CEE--S
T ss_pred ceEEEEEechHHHHHHHHHHHhCC--CcEEEEEEcCC-HHHHHHH---HHHcCCC-------------------ccc--C
Confidence 489999999999999999987653 59999999852 2211111 1111100 011 1
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 58 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 99 (329)
T 3evn_A 58 KLEDML-ADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKP 99 (329)
T ss_dssp CHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccC
Confidence 111110 12368999999999988899999999984 5777555
No 62
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.24 E-value=0.00075 Score=66.37 Aligned_cols=93 Identities=24% Similarity=0.294 Sum_probs=62.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|.||+..++.+...+ .++|++|.|. +.+.....-+ +|. + ++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~--~~~l~av~d~-~~~~~~~a~~----~g~-----~---------------~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAAD--NLEVHGVFDI-LAEKREAAAQ----KGL-----K---------------IY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTST--TEEEEEEECS-SHHHHHHHHT----TTC-----C---------------BC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhCC--CcEEEEEEcC-CHHHHHHHHh----cCC-----c---------------ee--C
Confidence 589999999999999999887653 5999999986 3333221111 221 1 00 0
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 11111 01226899999999999899999999998 45776544
No 63
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.22 E-value=0.00077 Score=65.69 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=63.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|++||||+|+|.||+..++.+...+ .++|++|.|. +.+....+. ..||. + . +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~--~~~lvav~d~-~~~~~~~~~---~~~g~-----~-~--------------~-- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSE--KLKLVTCYSR-TEDKREKFG---KRYNC-----A-G--------------D-- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCS--SEEEEEEECS-SHHHHHHHH---HHHTC-----C-C--------------C--
T ss_pred CcceEEEEccCHHHHHHHHHHHhCC--CcEEEEEECC-CHHHHHHHH---HHcCC-----C-C--------------c--
Confidence 4689999999999999999987653 5999999986 333322221 11121 0 0 0
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 011111 01236899999999999999999999998 45777554
No 64
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.20 E-value=0.00066 Score=66.60 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=61.2
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+. .++++...+ .++|+||.|.. ++.++. + |+ .++ ++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~--~~~l~av~d~~-~~~~~~--~----~~----~~~---------------~~-- 54 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNP--HFELYKIVERS-KELSKE--R----YP----QAS---------------IV-- 54 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCT--TEEEEEEECSS-CCGGGT--T----CT----TSE---------------EE--
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCC--CeEEEEEEcCC-HHHHHH--h----CC----CCc---------------eE--
Confidence 589999999999997 678777653 59999999863 221110 1 11 011 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 55 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (362)
T 3fhl_A 55 RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKP 97 (362)
T ss_dssp SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 1221110 12368999999999998999999999994 5776444
No 65
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.20 E-value=0.00054 Score=67.00 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=60.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|.||+.+++.+...+ .+++++|.|. +.+....+. ..||... .++ ++.
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~--~~~lv~v~d~-~~~~~~~~a---~~~~~~~-~~~---------------~~~-- 61 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAP--NATISGVASR-SLEKAKAFA---TANNYPE-STK---------------IHG-- 61 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCT--TEEEEEEECS-SHHHHHHHH---HHTTCCT-TCE---------------EES--
T ss_pred ceEEEEECchHHHHHHHHHHhhCC--CcEEEEEEcC-CHHHHHHHH---HHhCCCC-CCe---------------eeC--
Confidence 589999999999999999988764 4999999986 333222211 1122100 001 111
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..++ ..+.++|+|+.||+.....+.+...+++|. .|++
T Consensus 62 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~ 100 (362)
T 1ydw_A 62 SYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILL 100 (362)
T ss_dssp SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEE
T ss_pred CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEE
Confidence 11111 011268999999999888888888898884 4655
No 66
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.19 E-value=0.00042 Score=68.92 Aligned_cols=97 Identities=21% Similarity=0.219 Sum_probs=63.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCC------CCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRK------DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVI 141 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~------~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I 141 (442)
||||||+|+|.||+..++++.... ....+||||.|. +++....+. ..||.- +
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a---~~~~~~----~-------------- 83 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHA---AKLGAE----K-------------- 83 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHH---HHHTCS----E--------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHH---HHcCCC----e--------------
Confidence 699999999999999988886421 124799999996 333322221 112210 0
Q ss_pred EEEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 142 ~v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
++. |..++ ..+.++|+|+=||+...-.+.+...+++|. .|++--|
T Consensus 84 -~y~--d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 128 (412)
T 4gqa_A 84 -AYG--DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKP 128 (412)
T ss_dssp -EES--SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred -EEC--CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecC
Confidence 110 11110 112368999999999999999999999994 5777544
No 67
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.19 E-value=0.00075 Score=65.30 Aligned_cols=93 Identities=18% Similarity=0.164 Sum_probs=61.0
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
+|||||+|+|.||+. ++.++...+ .++|+||.|. +++....+. ..||.- + ++.
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~--~~~lvav~d~-~~~~a~~~a---~~~g~~----~---------------~y~- 76 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAE--NCVVTAIASR-DLTRAREMA---DRFSVP----H---------------AFG- 76 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCS--SEEEEEEECS-SHHHHHHHH---HHHTCS----E---------------EES-
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCC--CeEEEEEECC-CHHHHHHHH---HHcCCC----e---------------eeC-
Confidence 489999999999986 577877664 5999999996 343322221 112210 0 110
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+..++ ..+..+|+|+=||+...-.+.+...+++|. .|++-
T Consensus 77 -d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~E 116 (350)
T 4had_A 77 -SYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCE 116 (350)
T ss_dssp -SHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred -CHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEe
Confidence 11110 012368999999999999999999999984 47663
No 68
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.18 E-value=0.00073 Score=65.23 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=59.8
Q ss_pred cccC-ceeEEEEcCChhHHHHHHHHHhC-----CCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEEC
Q 013492 64 AAQA-KLKVAINGFGRIGRNFLRCWHGR-----KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVD 137 (442)
Q Consensus 64 ~~~~-~ikVaInGfGrIGr~~lr~l~~~-----~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~ 137 (442)
.+.| |+||||+|+|+||+.-++++... ..+.++||||.|.. .+....+. ..||.- +
T Consensus 20 ~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~-~~~a~~~a---~~~g~~----~---------- 81 (393)
T 4fb5_A 20 FQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN-AGLAEARA---GEFGFE----K---------- 81 (393)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---TTHHHHH---HHHTCS----E----------
T ss_pred ccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC-HHHHHHHH---HHhCCC----e----------
Confidence 3345 59999999999999888776431 12358999999963 22221111 112210 0
Q ss_pred CEEEEEEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 138 Gk~I~v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
++. |..++ ..+.++|+|+=||+...-.+.+...+++|. .|++--
T Consensus 82 -----~y~--d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EK 125 (393)
T 4fb5_A 82 -----ATA--DWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEK 125 (393)
T ss_dssp -----EES--CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECS
T ss_pred -----ecC--CHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEcc
Confidence 110 11110 012268999999999999999999999986 366633
No 69
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.18 E-value=0.0006 Score=65.40 Aligned_cols=93 Identities=20% Similarity=0.271 Sum_probs=62.6
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
+++||||+|+|.+|+.+++.+...+ .+++++|.|. +.+....+. .. +.++.
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~--~~~~v~v~d~-~~~~~~~~~-----------------~~--------~~~~~- 59 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLP--GAALVRLASS-NPDNLALVP-----------------PG--------CVIES- 59 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCT--TEEEEEEEES-CHHHHTTCC-----------------TT--------CEEES-
T ss_pred CcceEEEECCcHHHHHHHHHHHhCC--CcEEEEEEeC-CHHHHHHHH-----------------hh--------CcccC-
Confidence 4589999999999999999998764 4999999986 233221111 11 11221
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
++.++ ..+.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 60 -~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP 101 (315)
T 3c1a_A 60 -DWRSV-VSAPEVEAVIIATPPATHAEITLAAIASGK-AVLVEKP 101 (315)
T ss_dssp -STHHH-HTCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CHHHH-hhCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCC
Confidence 22221 012378999999999888888888899984 5666434
No 70
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.17 E-value=0.0001 Score=71.67 Aligned_cols=96 Identities=24% Similarity=0.274 Sum_probs=58.8
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||+|+| +|++||.+++++.+.+ +++||++-|....+. ...|. |.+.+ ... ++ .+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~--~~eLv~~~d~~~~~~----~G~d~--gel~g----~~~-gv-------~v~-- 64 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAP--DATLVGALDRTGSPQ----LGQDA--GAFLG----KQT-GV-------ALT-- 64 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCT--TEEEEEEBCCTTCTT----TTSBT--TTTTT----CCC-SC-------BCB--
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEEecCccc----ccccH--HHHhC----CCC-Cc-------eec--
Confidence 38999999 9999999999998874 599999987532111 00010 10000 000 11 111
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
.|..++- .++|+|||+|......+.+...+++|.+ +||.
T Consensus 65 ~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVig 103 (272)
T 4f3y_A 65 DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVIG 103 (272)
T ss_dssp CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEEC
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEE
Confidence 1211110 1579999999876667778888889986 5553
No 71
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.16 E-value=0.00088 Score=66.80 Aligned_cols=88 Identities=23% Similarity=0.291 Sum_probs=57.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCC------CcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDS------PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVI 141 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~------~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I 141 (442)
++||||.|+|.||+.+++.+..+++. +++|++|.|.. ++. . .+ +.. .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~-~~~-------~--~~-~~~-------~--------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD-PRK-------P--RA-IPQ-------E--------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC-TTS-------C--CS-SCG-------G---------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC-HHH-------h--hc-cCc-------c---------
Confidence 48999999999999999999876410 48999999852 110 0 00 000 0
Q ss_pred EEEecCCCCCCCCCCccccEEEcCCCCC-CCHhhHHHHHHcCCCeEEEeC
Q 013492 142 QVVSNRNPVNLPWGDLGIDLVIEGTGVF-VDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 142 ~v~~~~~p~~l~W~~~gvDiVie~TG~f-~~~e~a~~hl~aGAkkVIIsa 190 (442)
.++ .|+.++- .+|+|+||||.. ...+.+...+++|.. | +++
T Consensus 56 ~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGKh-V-Vta 97 (332)
T 2ejw_A 56 LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGIP-L-ITA 97 (332)
T ss_dssp GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTCC-E-EEC
T ss_pred ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCCe-E-EEC
Confidence 011 2444443 789999999976 345677778888863 4 554
No 72
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.16 E-value=0.00073 Score=65.73 Aligned_cols=96 Identities=24% Similarity=0.284 Sum_probs=58.9
Q ss_pred CceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||+|+|.||+. .++.+... .+.++|++|.|.. ++.....-+| . | +.++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~-~~~~~l~av~d~~-~~~~~~~~~~-------~--------------~--~~~~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNR-KDSWHVAHIFRRH-AKPEEQAPIY-------S--------------H--IHFT- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTC-TTTEEEEEEECSS-CCGGGGSGGG-------T--------------T--CEEE-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhc-CCCeEEEEEEcCC-HhHHHHHHhc-------C--------------C--CceE-
Confidence 6799999999999996 55624332 2459999999863 2111111111 0 0 0111
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 122221 01236899999999999889999999999 45666433
No 73
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.08 E-value=0.0013 Score=63.27 Aligned_cols=94 Identities=22% Similarity=0.291 Sum_probs=62.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
++||||+|+|.||+.+++.+...+ .+++++|.|. +++....+. ..||. . .++ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~--~~~~~~v~d~-~~~~~~~~~---~~~~~----~---------------~~~--~ 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSG--EYQLVAIYSR-KLETAATFA---SRYQN----I---------------QLF--D 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--SEEEEEEECS-SHHHHHHHG---GGSSS----C---------------EEE--S
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCC--CeEEEEEEeC-CHHHHHHHH---HHcCC----C---------------eEe--C
Confidence 379999999999999999988753 5999999986 333222211 11211 0 111 1
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
++.++- +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 222221 2378999999999888888888899884 4666433
No 74
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.07 E-value=0.00042 Score=66.84 Aligned_cols=97 Identities=19% Similarity=0.194 Sum_probs=62.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCC-----CCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKD-----SPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQ 142 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~-----~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~ 142 (442)
|+||||+|+|.||+..++++...+. ...+|+||.|. +++....+. ..||.- +
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a---~~~g~~----~--------------- 62 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAA---GKLGWS----T--------------- 62 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHH---HHHTCS----E---------------
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHH---HHcCCC----c---------------
Confidence 5999999999999998888764321 12499999996 344332221 112210 0
Q ss_pred EEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 143 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 143 v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
++. |..++ ..+.++|+|+=||+...-.+.+...+++| |.|++--|
T Consensus 63 ~~~--d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 107 (390)
T 4h3v_A 63 TET--DWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKP 107 (390)
T ss_dssp EES--CHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred ccC--CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecC
Confidence 111 11111 11237899999999999999999999999 45776433
No 75
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.03 E-value=0.0012 Score=64.40 Aligned_cols=96 Identities=19% Similarity=0.252 Sum_probs=63.6
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
.++||||+|+|.||+..++.+.... +.+++++|.|. +.+....+. ..||. + ++.
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~---~~~~~-----~---------------~~~- 65 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAV---ERTGA-----R---------------GHA- 65 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHH---HHHCC-----E---------------EES-
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHH---HHcCC-----c---------------eeC-
Confidence 4589999999999999999998762 35999999986 333222221 11110 1 111
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 66 -~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 66 -SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp -CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 11111 01226899999999998888899999998 45766443
No 76
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.00 E-value=0.0012 Score=68.54 Aligned_cols=94 Identities=23% Similarity=0.328 Sum_probs=60.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhC-------CCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGR-------KDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKV 140 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~-------~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~ 140 (442)
++||||.|+|.||+.+++.+.++ ...+++|++|.|.. .+....++ +. ..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~-~~~~~~~~--~~--------~~------------- 65 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRN-LDKAEALA--GG--------LP------------- 65 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSC-HHHHHHHH--TT--------CC-------------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECC-HHHhhhhc--cc--------Cc-------------
Confidence 58999999999999999988642 11359999999863 22211111 00 00
Q ss_pred EEEEecCCCCCCCCCCccccEEEcCCCC-CCCHhhHHHHHHcCCCeEEEeCC
Q 013492 141 IQVVSNRNPVNLPWGDLGIDLVIEGTGV-FVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 141 I~v~~~~~p~~l~W~~~gvDiVie~TG~-f~~~e~a~~hl~aGAkkVIIsap 191 (442)
++ .|+.++ ..+..+|+|++|||. ....+.+...+++|. .|+..+|
T Consensus 66 --~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 66 --LT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp --EE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred --cc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 01 111111 112378999999996 777788889999986 3555445
No 77
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.99 E-value=0.0014 Score=63.95 Aligned_cols=98 Identities=18% Similarity=0.176 Sum_probs=64.3
Q ss_pred cCceeEEEEcCC-hhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE
Q 013492 66 QAKLKVAINGFG-RIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 66 ~~~ikVaInGfG-rIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
..++||||+|+| .+|+..++++.... +.++|++|.|. +++....+. ..||. .+ ++
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a---~~~~~----~~---------------~~ 71 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLS-HLFEITAVTSR-TRSHAEEFA---KMVGN----PA---------------VF 71 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTT-TTEEEEEEECS-SHHHHHHHH---HHHSS----CE---------------EE
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCC-CceEEEEEEcC-CHHHHHHHH---HHhCC----Cc---------------cc
Confidence 346899999999 89999999987651 35999999996 343322221 11221 01 11
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
. +..++ ..+..+|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 72 ~--~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 114 (340)
T 1zh8_A 72 D--SYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKP 114 (340)
T ss_dssp S--CHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred C--CHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCC
Confidence 1 11111 012268999999999988899999999994 5776443
No 78
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.98 E-value=0.0011 Score=65.90 Aligned_cols=36 Identities=28% Similarity=0.588 Sum_probs=30.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCC------CCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKD------SPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~------~~~evvaInd~ 103 (442)
++||||.|+|.||+.+++.+.++.+ .+++|++|.|.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 3899999999999999999987610 35999999985
No 79
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.96 E-value=0.0017 Score=65.73 Aligned_cols=99 Identities=22% Similarity=0.237 Sum_probs=62.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcc-cCcccccCCcceeeecCCcEEECCEEEEEEe-
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLK-YDSTLGIFEADVKPVGTDGISVDGKVIQVVS- 145 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~Llk-yDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~- 145 (442)
++||||+|+|.||+..++.+...+ .++|++|.|.. ++.+..+.+ +. .||. + .++ ++.
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~--~~~lvav~d~~-~~~~~~~a~~~~-~~g~-~-~~~---------------~~~~ 78 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRD--DVEIVAFADPD-PYMVGRAQEILK-KNGK-K-PAK---------------VFGN 78 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEECSC-HHHHHHHHHHHH-HTTC-C-CCE---------------EECS
T ss_pred CceEEEEecCHHHHHHHHHHHhCC--CcEEEEEEeCC-HHHHHHHHHHHH-hcCC-C-CCc---------------eecc
Confidence 589999999999999999888653 59999999963 333222211 00 0110 0 001 111
Q ss_pred -cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 146 -NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 146 -~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
..+..++ ..+..+|+|+-||+.....+.+...+++|. .|++-
T Consensus 79 ~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~E 121 (444)
T 2ixa_A 79 GNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGME 121 (444)
T ss_dssp STTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred CCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEe
Confidence 0111111 122368999999999988899999999985 46653
No 80
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.96 E-value=0.0017 Score=65.86 Aligned_cols=97 Identities=20% Similarity=0.187 Sum_probs=61.5
Q ss_pred ceeEEEEcCChhHH-HHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr-~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+ .+++.+...+ .++|++|.|.. .+....+. ..||.-...+. ++
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~--~~~lvav~d~~-~~~~~~~a---~~~g~~~~~~~---------------~~-- 139 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQ--HSRIEALVSGN-AEKAKIVA---AEYGVDPRKIY---------------DY-- 139 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCS--SEEEEEEECSC-HHHHHHHH---HHTTCCGGGEE---------------CS--
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCC--CcEEEEEEcCC-HHHHHHHH---HHhCCCccccc---------------cc--
Confidence 58999999999997 8889886643 59999999863 33221111 11221000000 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
.+..++- .+.++|+|+.||+.....+.+...+++|. .|++-
T Consensus 140 ~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~E 180 (433)
T 1h6d_A 140 SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCE 180 (433)
T ss_dssp SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEc
Confidence 1222221 12368999999999988899999999984 46653
No 81
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.93 E-value=0.0025 Score=63.30 Aligned_cols=36 Identities=25% Similarity=0.535 Sum_probs=30.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHhC----CCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGR----KDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~----~~~~~evvaInd~ 103 (442)
++||||.|+|.||+.+++.+.++ ...+++|++|.|.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 58999999999999999999763 1135999999985
No 82
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.93 E-value=0.00096 Score=61.76 Aligned_cols=80 Identities=23% Similarity=0.355 Sum_probs=55.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
+||||+|+|++|+.+++.+... .++++++.|... + .+ . .. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~---g~~lv~v~d~~~-~---------------------~~-~----------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN---GFEIAAILDVRG-E---------------------HE-K----------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSC-C---------------------CT-T----------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhcC---CCEEEEEEecCc-c---------------------hh-h----------hc--CC
Confidence 4899999999999999998842 489988887421 1 00 0 11 12
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+.++-- .++|+|++||+.....+.+...+++|.. ||+.
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~~-vv~~ 80 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGID-LIVL 80 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTCE-EEES
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 222210 3789999999988778888888888873 4443
No 83
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.92 E-value=0.0012 Score=64.59 Aligned_cols=94 Identities=21% Similarity=0.233 Sum_probs=62.5
Q ss_pred ceeEEEEcCChhHH-HHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr-~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+ .+++.+...+ .++|++|.|. +.+....+. ..||. . .+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a---~~~g~-----~---------------~~-- 78 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEP--LTEVTAIASR-RWDRAKRFT---ERFGG-----E---------------PV-- 78 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCT--TEEEEEEEES-SHHHHHHHH---HHHCS-----E---------------EE--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCC--CeEEEEEEcC-CHHHHHHHH---HHcCC-----C---------------Cc--
Confidence 58999999999998 6889888764 5999999986 333222211 11110 0 01
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 79 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 111111 012368999999999999999999999985 4766444
No 84
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.89 E-value=0.001 Score=65.90 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=63.2
Q ss_pred CceeEEEEcCC-hhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfG-rIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||+|+| ++|+.+++.+...+ .++|+||.|.. .+....+. ..||. + ++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~--~~~l~av~d~~-~~~~~~~a---~~~g~-----~---------------~~- 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHP--DAQIVAACDPN-EDVRERFG---KEYGI-----P---------------VF- 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCT--TEEEEEEECSC-HHHHHHHH---HHHTC-----C---------------EE-
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCC--CeEEEEEEeCC-HHHHHHHH---HHcCC-----C---------------eE-
Confidence 57899999999 99999999988764 59999999863 33221111 11111 0 01
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ ..+..+|+|+-||+.....+.+...+++| |.|++--|
T Consensus 54 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 -ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp -SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 011111 01126899999999988889999999999 45766444
No 85
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.87 E-value=0.0013 Score=63.02 Aligned_cols=32 Identities=19% Similarity=0.449 Sum_probs=28.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+||+|+|+|++||.+++++.+++ + +||++-|.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~--~-eLva~~d~ 35 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKG--H-EIVGVIEN 35 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--C-EEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCC--C-EEEEEEec
Confidence 79999999999999999999874 5 99998874
No 86
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.87 E-value=0.0017 Score=61.98 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=60.7
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+. +++.+...+ .+++++|.|. +.+....+. ..||. . . +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a---~~~~~-----~-~------~---------- 57 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSE--RFEFVGAFTP-NKVKREKIC---SDYRI-----M-P------F---------- 57 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCS--SSEEEEEECS-CHHHHHHHH---HHHTC-----C-B------C----------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCC--CeEEEEEECC-CHHHHHHHH---HHcCC-----C-C------c----------
Confidence 589999999999997 888887653 5999999986 333222221 11221 0 0 0
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++- + ++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 58 ~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (308)
T 3uuw_A 58 DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKP 98 (308)
T ss_dssp SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCC
Confidence 0111110 1 68999999999998899999999985 4666433
No 87
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.77 E-value=0.0019 Score=63.43 Aligned_cols=95 Identities=18% Similarity=0.266 Sum_probs=61.5
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+. +++++...+ .++|++|.|. +++....+.+ .||. ++ ++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~--~~~l~av~d~-~~~~~~~~a~---~~~~----~~---------------~~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQ--DIRIVAACDS-DLERARRVHR---FISD----IP---------------VL-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCT--TEEEEEEECS-SHHHHGGGGG---TSCS----CC---------------EE--
T ss_pred cceEEEECCCHHHHHHHHHHHHhCC--CcEEEEEEcC-CHHHHHHHHH---hcCC----Cc---------------cc--
Confidence 489999999999995 889887764 4999999986 3433222211 1110 00 11
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ -.+.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 58 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 011111 012268999999998888888889999984 4766433
No 88
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.76 E-value=0.0034 Score=60.12 Aligned_cols=92 Identities=16% Similarity=0.223 Sum_probs=59.4
Q ss_pred ceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+. +++.+...+ .+++++|.|.. .+....+. ..+|. . ++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~--~~~lvav~d~~-~~~~~~~~---~~~g~-----~---------------~~-- 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAAS--DWTLQGAWSPT-RAKALPIC---ESWRI-----P---------------YA-- 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCS--SEEEEEEECSS-CTTHHHHH---HHHTC-----C---------------BC--
T ss_pred cceEEEECCCHHHHHHHHHHHHhCC--CeEEEEEECCC-HHHHHHHH---HHcCC-----C---------------cc--
Confidence 489999999999997 888887653 49999999853 22111111 01110 0 00
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.++..+ +.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 111122 1368999999998888888888899885 4665433
No 89
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.76 E-value=0.0016 Score=62.26 Aligned_cols=72 Identities=24% Similarity=0.294 Sum_probs=51.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCC-ChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~-~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|||+|+| +|++||.+++++..++ +++|+++-|.. +++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~--~~elva~~d~~~dl~--------------------------------------- 39 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAAD--DLTLSAELDAGDPLS--------------------------------------- 39 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCT--TCEEEEEECTTCCTH---------------------------------------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEccCCCHH---------------------------------------
Confidence 5899999 6999999999988764 49999988641 000
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
.+. ..++|+|||+|......+.+...+++|.. +||
T Consensus 40 ----~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~-~Vi 74 (245)
T 1p9l_A 40 ----LLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIH-AVV 74 (245)
T ss_dssp ----HHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCE-EEE
T ss_pred ----HHh--ccCCcEEEEccChHHHHHHHHHHHHcCCC-EEE
Confidence 000 01468888888777777777777788875 444
No 90
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.75 E-value=0.001 Score=65.77 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=30.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCC-----CCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~-----~~~~evvaInd~ 103 (442)
++||||.|+|.||+.+++.+..++ ..+++|++|.|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 489999999999999999997642 114899999985
No 91
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.71 E-value=0.0024 Score=50.94 Aligned_cols=97 Identities=21% Similarity=0.250 Sum_probs=58.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
|..||+|.|.|.||+.+++.|..+. ..+|+++.. +.+.+..+... | +. . .....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r--~~~~~~~~~~~----~-----~~------~-------~~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADH--DLAALAVLNRM----G-----VA------T-------KQVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEES--CHHHHHHHHTT----T-----CE------E-------EECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeC--CHHHHHHHHhC----C-----Cc------E-------EEecC
Confidence 4469999999999999999998863 367776654 23332222210 0 00 0 00011
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
.++..+.---.++|+||.|+|.....+.+...+++|.+.+.++
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 1111110001278999999998877777778888998766554
No 92
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.70 E-value=0.0052 Score=59.09 Aligned_cols=94 Identities=20% Similarity=0.299 Sum_probs=59.2
Q ss_pred CceeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 67 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
|++||||+|+|.||+. +++.+...+ .++|+ |.|. +.+....+. ..||. .. .+.
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~--~~~l~-v~d~-~~~~~~~~a---~~~g~---~~----------------~~~ 54 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWP--DIELV-LCTR-NPKVLGTLA---TRYRV---SA----------------TCT 54 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTST--TEEEE-EECS-CHHHHHHHH---HHTTC---CC----------------CCS
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCC--CceEE-EEeC-CHHHHHHHH---HHcCC---Cc----------------ccc
Confidence 5689999999999985 889886653 48999 8886 333222221 11221 00 000
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
...+.+ +.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 55 -~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 55 -DYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp -STTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred -CHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 011112 2378999999998888888888888885 3665433
No 93
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.61 E-value=0.0029 Score=60.76 Aligned_cols=88 Identities=20% Similarity=0.218 Sum_probs=58.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCC-CCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRK-DSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~-~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+..++.+.... .+.+++++|.|... + ...+| +..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~--a~~~g-------------~~~---------- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------L--GSLDE-------------VRQ---------- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------C--CEETT-------------EEB----------
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------H--HHHcC-------------CCC----------
Confidence 589999999999999999886410 13599999998521 0 11111 100
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
.+..++ -.+.++|+|+.||+.....+.+...+++|. .|++-
T Consensus 55 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~E 95 (294)
T 1lc0_A 55 ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVE 95 (294)
T ss_dssp CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEE
T ss_pred CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEe
Confidence 111111 012378999999999988899999999985 46664
No 94
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.59 E-value=0.0044 Score=59.30 Aligned_cols=91 Identities=26% Similarity=0.278 Sum_probs=58.0
Q ss_pred eeEEEEcCChhHHHH-HHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAINGFGRIGRNF-LRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInGfGrIGr~~-lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+||||+|+|.+|+.+ ++.+.. + .+++++|.|.. .+....+. ..||.- + ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~--~~~~vav~d~~-~~~~~~~~---~~~g~~----~---------------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-T--GGEVVSMMSTS-AERGAAYA---TENGIG----K---------------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-T--TCEEEEEECSC-HHHHHHHH---HHTTCS----C---------------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-C--CCeEEEEECCC-HHHHHHHH---HHcCCC----c---------------cc--C
Confidence 589999999999998 888876 3 48999999863 33222221 112210 0 00 0
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+..++ ..+.++|+|+.||+.....+.+...+++|. .|++-
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~e 92 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCE 92 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEe
Confidence 11110 011268999999998888888888899884 46653
No 95
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.58 E-value=0.0031 Score=60.87 Aligned_cols=99 Identities=23% Similarity=0.285 Sum_probs=60.0
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||+|+|+ |++||.+++.+.+.+ .++|+++-|...-. +...| .|.+.+ .... | +.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~--~~elva~~d~~~~~----~~g~d--~~~~~g----~~~~-----~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALE--GVQLGAALEREGSS----LLGSD--AGELAG----AGKT-----G--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST--TEECCCEECCTTCT----TCSCC--TTCSSS----SSCC-----S--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEecCchh----hhhhh--HHHHcC----CCcC-----C--ceec--
Confidence 489999996 999999999988764 49999888742111 00001 011100 0000 1 1222
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+...+- .++|+|||+|......+.+...+++|.. +|+..|
T Consensus 64 ~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 2333321 1689999998766667778888899975 666443
No 96
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.54 E-value=0.0028 Score=65.88 Aligned_cols=107 Identities=21% Similarity=0.338 Sum_probs=59.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecC-CcEE---ECCEEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGT-DGIS---VDGKVIQ 142 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~-~~i~---v~Gk~I~ 142 (442)
.++||||+|+|+||+.+++.+... +.++|++|.|.. ++......+ ..||. +..+...++ ..+. -.|. +.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~--~~veLvAV~D~~-~era~~~a~--~~yG~-~~~~~~~~~~~~i~~a~~~g~-~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARM--QGIEVGALSARR-LPNTFKAIR--TAYGD-EENAREATTESAMTRAIEAGK-IA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTS--SSEEEEEEECSS-THHHHHHHH--HHHSS-STTEEECSSHHHHHHHHHTTC-EE
T ss_pred CceEEEEECChHHHHHHHHHHhhC--CCcEEEEEEeCC-HHHHHHHHH--HhcCC-ccccccccchhhhhhhhccCC-ce
Confidence 369999999999999999988765 359999999963 333222221 00120 011110000 0000 0011 12
Q ss_pred EEecCCCCCCCCCCccccEEEcCCCCC-CCHhhHHHHHHcCC
Q 013492 143 VVSNRNPVNLPWGDLGIDLVIEGTGVF-VDREGAGKHIQAGA 183 (442)
Q Consensus 143 v~~~~~p~~l~W~~~gvDiVie~TG~f-~~~e~a~~hl~aGA 183 (442)
++. |..++ ..+.++|+|++|||.. ...+.+...+++|.
T Consensus 95 v~~--D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 95 VTD--DNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp EES--CHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred EEC--CHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 222 22221 1233799999999864 45677888888886
No 97
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.52 E-value=0.0014 Score=63.50 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=59.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCC---hhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGG---VKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~---~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
|++||||+|+|.+|+..++++ . +.++|+||.|... .+.++...+ .||. ..+ +
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~--~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~~---------------~ 55 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--D--EECSITGIAPGVPEEDLSKLEKAIS---EMNI---KPK---------------K 55 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--C--TTEEEEEEECSSTTCCCHHHHHHHH---TTTC---CCE---------------E
T ss_pred CceEEEEEccchhHHHHHHhc--C--CCcEEEEEecCCchhhHHHHHHHHH---HcCC---CCc---------------c
Confidence 679999999999999888887 3 3599999998532 222222210 0110 001 1
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
+ .+..++ ..+..+|+|+-||+...-.+.+...+++|. .|++--
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EK 98 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEK 98 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeC
Confidence 1 111111 012368999999998888888999999995 476643
No 98
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.43 E-value=0.0068 Score=58.74 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=60.4
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+ |.||+..++++... +.+++||.|....+ +.. +..++ .++ ++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~~~--~~~---~~~~~----~~~---------------~~~- 54 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDPATNV--GLV---DSFFP----EAE---------------FFT- 54 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECSSCCC--GGG---GGTCT----TCE---------------EES-
T ss_pred ceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcCCHHH--HHH---HhhCC----CCc---------------eeC-
Confidence 379999999 79999999999875 37999999863221 111 11110 011 111
Q ss_pred CCCCCCC-----C--CCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLP-----W--GDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~-----W--~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+.+++- | .+..+|+|+-||+...-.+.+...+++| |.|++-
T Consensus 55 -~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~E 102 (312)
T 3o9z_A 55 -EPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSE 102 (312)
T ss_dssp -CHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEEC
T ss_pred -CHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEE
Confidence 111110 0 1237899999999999999999999999 457663
No 99
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.42 E-value=0.0073 Score=58.22 Aligned_cols=94 Identities=17% Similarity=0.180 Sum_probs=57.8
Q ss_pred ceeEEEEcCChhHH-HHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr-~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.+|. .+++.+.. +.++|++|.|.. ++....+. ..||. ++ ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---~~~~lvav~d~~-~~~~~~~a---~~~~~----~~---------------~~-- 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---AGAELAGVFESD-SDNRAKFT---SLFPS----VP---------------FA-- 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---TTCEEEEEECSC-TTSCHHHH---HHSTT----CC---------------BC--
T ss_pred ccEEEEECCChHHHHHhhhhhcC---CCcEEEEEeCCC-HHHHHHHH---HhcCC----Cc---------------cc--
Confidence 58999999999996 67777753 248999999853 22111111 01110 00 00
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 011110 012268999999999988899999999984 4666433
No 100
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.36 E-value=0.0032 Score=61.35 Aligned_cols=85 Identities=25% Similarity=0.230 Sum_probs=59.3
Q ss_pred ceeEEEEcCChhHH-HHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr-~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.||+ ..++++...+ .++|+||.|.. .+ + +| ++ ++.
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~--~~~lvav~d~~-~~------~----~g-----~~---------------~~~- 70 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNA--NFKLVATASRH-GT------V----EG-----VN---------------SYT- 70 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCT--TEEEEEEECSS-CC------C----TT-----SE---------------EES-
T ss_pred CceEEEEecCHHHHHHHHHHHHhCC--CeEEEEEEeCC-hh------h----cC-----CC---------------ccC-
Confidence 48999999999999 7999998764 59999999852 11 0 11 00 111
Q ss_pred CCCCCCCCCC-ccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLPWGD-LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~W~~-~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+..++ ..+ ..+|+|+-||+...-.+.+...+++| |.|++-
T Consensus 71 -~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~E 111 (330)
T 4ew6_A 71 -TIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLE 111 (330)
T ss_dssp -SHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEEC
T ss_pred -CHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEe
Confidence 11111 011 26899999999888889999999999 557664
No 101
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.19 E-value=0.011 Score=57.44 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=60.7
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+ |.||+..++++... +.+++||.|..... +. .+..|+ .++ ++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~~~--~~---~~~~~~----~~~---------------~~~- 54 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDINDSV--GI---IDSISP----QSE---------------FFT- 54 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECSSCCC--GG---GGGTCT----TCE---------------EES-
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcCCHHH--HH---HHhhCC----CCc---------------EEC-
Confidence 389999999 79999999999875 37999999863211 11 111110 011 111
Q ss_pred CCCCCCC--------CCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 147 RNPVNLP--------WGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 147 ~~p~~l~--------W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+..++- ..+.++|+|+-||+...-.+.+...+++|. .|++-
T Consensus 55 -~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~E 103 (318)
T 3oa2_A 55 -EFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICE 103 (318)
T ss_dssp -SHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred -CHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEE
Confidence 111110 023479999999999999999999999994 57663
No 102
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.04 E-value=0.0086 Score=61.81 Aligned_cols=99 Identities=11% Similarity=0.185 Sum_probs=64.1
Q ss_pred ceeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 68 KLKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 68 ~ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
++||||+|+ |.+|+..++++.... +.++||||.|.. .+....+. ..||. + .++ +
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~-~~~~lvav~d~~-~~~a~~~a---~~~g~-~-~~~---------------~ 96 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLS-SQFQIVALYNPT-LKSSLQTI---EQLQL-K-HAT---------------G 96 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTT-TTEEEEEEECSC-HHHHHHHH---HHTTC-T-TCE---------------E
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcC-CCeEEEEEEeCC-HHHHHHHH---HHcCC-C-cce---------------e
Confidence 589999999 999999999998751 249999999963 33221111 11221 0 000 1
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCC-----CeEEEeCC
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA-----KKVLITAP 191 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGA-----kkVIIsap 191 (442)
+. +..++ -.+..+|+|+-||+...-.+.+...+++|. |.|++--|
T Consensus 97 ~~--d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 97 FD--SLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp ES--CHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred eC--CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 11 11111 011268999999998888888989999994 67877544
No 103
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.04 E-value=0.0081 Score=58.23 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=55.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
.+||+|.|||.||+.++|. + .+|++++-+ +. .| .+ |- .+. .
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~---~leLv~v~~----~k----------~g------------el---gv--~a~--~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G---NFEKIYAYD----RI----------SK------------DI---PG--VVR--L 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S---CCSEEEEEC----SS----------CC------------CC---SS--SEE--C
T ss_pred cceEEEECcCHHHHHHHhc---C---CcEEEEEEe----cc----------cc------------cc---Cc--eee--C
Confidence 4799999999999999998 2 499998875 10 11 01 11 111 3
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
|...+.. ..|+|+||++...-++....-|++|.. ||++.
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S 91 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVN-YIIIS 91 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECC
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcC
Confidence 4555552 689999999987666778888899986 44443
No 104
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.82 E-value=0.012 Score=57.81 Aligned_cols=94 Identities=17% Similarity=0.238 Sum_probs=59.4
Q ss_pred ceeEEEEcCChhHH-HHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGFGRIGR-NFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGfGrIGr-~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||||+|+|.+|+ .++.++.. +.++|+||.|. +++....+. ..||. ++ ++.
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---~~~~lvav~d~-~~~~a~~~a---~~~~~----~~---------------~~~- 78 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---AGARLAGFHEK-DDALAAEFS---AVYAD----AR---------------RIA- 78 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---TTCEEEEEECS-CHHHHHHHH---HHSSS----CC---------------EES-
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---CCcEEEEEEcC-CHHHHHHHH---HHcCC----Cc---------------ccC-
Confidence 58999999999995 45666653 24999999996 333322221 11221 00 010
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..++ ..+.++|+|+-||+...-.+.+...+++| |.|++--|
T Consensus 79 -~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 120 (361)
T 3u3x_A 79 -TAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKP 120 (361)
T ss_dssp -CHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESC
T ss_pred -CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCC
Confidence 11111 01236899999999988889999999999 45776544
No 105
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.76 E-value=0.018 Score=57.85 Aligned_cols=102 Identities=22% Similarity=0.228 Sum_probs=60.2
Q ss_pred ceeEEEEcCCh---hHHHHHHHHHhCCCCCcEEEE-EecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 68 KLKVAINGFGR---IGRNFLRCWHGRKDSPLEVVA-INDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 68 ~ikVaInGfGr---IGr~~lr~l~~~~~~~~evva-Ind~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
++||||+|+|+ ||+..++++...+ .++||+ |.|. +++....+. ..||.-. .+ .-.+ + -.+
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~--~~~lva~v~d~-~~~~a~~~a---~~~g~~~--~~-~~~~---~----~~l 100 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDD--HYELVAGALSS-TPEKAEASG---RELGLDP--SR-VYSD---F----KEM 100 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTS--CEEEEEEECCS-SHHHHHHHH---HHHTCCG--GG-BCSC---H----HHH
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCC--CcEEEEEEeCC-CHHHHHHHH---HHcCCCc--cc-ccCC---H----HHH
Confidence 58999999999 9999998877653 499997 8886 333222211 1122100 00 0000 0 001
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
+..... . +.++|+|+-||+...-.+.+...+++|. .|++--|
T Consensus 101 l~~~~~--~---~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 101 AIREAK--L---KNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp HHHHHH--C---TTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred Hhcccc--c---CCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 110000 0 0258999999999999999999999984 4766444
No 106
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.76 E-value=0.0065 Score=61.58 Aligned_cols=99 Identities=11% Similarity=0.154 Sum_probs=64.0
Q ss_pred ceeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 68 KLKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 68 ~ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
++||||+|+ |.+|+..++.+...+ +.++||||.|.. .+....+. ..||.- .+ .+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~-~~~~lvav~d~~-~~~~~~~a---~~~g~~--~~---------------~~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLS-SQFQITALYSPK-IETSIATI---QRLKLS--NA---------------TA 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTT-TTEEEEEEECSS-HHHHHHHH---HHTTCT--TC---------------EE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcC-CCeEEEEEEeCC-HHHHHHHH---HHcCCC--cc---------------ee
Confidence 489999999 999999999998761 249999999863 33221111 112210 00 11
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCC-----CeEEEeCC
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA-----KKVLITAP 191 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGA-----kkVIIsap 191 (442)
+. +..++- .+..+|+|+-||+.....+.+...+++|. |.|++--|
T Consensus 78 ~~--~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 78 FP--TLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp ES--SHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred eC--CHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 11 111110 12268999999998888888999999994 66777533
No 107
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.67 E-value=0.016 Score=57.52 Aligned_cols=95 Identities=21% Similarity=0.126 Sum_probs=59.8
Q ss_pred ceeEEEEcCCh---hHHHHHHHHHhCCCCCcEEEE-EecCCChhhhhhhcccCcccccC----CcceeeecCCcEEECCE
Q 013492 68 KLKVAINGFGR---IGRNFLRCWHGRKDSPLEVVA-INDTGGVKQASHLLKYDSTLGIF----EADVKPVGTDGISVDGK 139 (442)
Q Consensus 68 ~ikVaInGfGr---IGr~~lr~l~~~~~~~~evva-Ind~~~~~~la~LlkyDSt~g~f----~~~v~~~~~~~i~v~Gk 139 (442)
++||||+|+|+ ||+..++++...+ .++||+ |.|. +++....+. ..||.- -.+.+
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~--~~~lva~v~d~-~~~~a~~~a---~~~g~~~~~~~~~~~------------ 73 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDN--TFVLVAGAFDI-DPIRGSAFG---EQLGVDSERCYADYL------------ 73 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGG--SEEEEEEECCS-SHHHHHHHH---HHTTCCGGGBCSSHH------------
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCC--CeEEEEEEeCC-CHHHHHHHH---HHhCCCcceeeCCHH------------
Confidence 58999999999 9999998877653 499998 8775 333222221 112210 00000
Q ss_pred EEEEEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 140 VIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 140 ~I~v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
.++.... . .+.++|+|+-||+.....+.+...+++|. .|++
T Consensus 74 --~ll~~~~--~---~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~ 114 (398)
T 3dty_A 74 --SMFEQEA--R---RADGIQAVSIATPNGTHYSITKAALEAGL-HVVC 114 (398)
T ss_dssp --HHHHHHT--T---CTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEE
T ss_pred --HHHhccc--c---cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEE
Confidence 0111000 0 00258999999999999999999999984 5665
No 108
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=95.49 E-value=0.011 Score=60.52 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=59.0
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEE-ecCCChhhhhhhc-ccCcccccCCcceeeecCC---cEE--ECCEE
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAI-NDTGGVKQASHLL-KYDSTLGIFEADVKPVGTD---GIS--VDGKV 140 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaI-nd~~~~~~la~Ll-kyDSt~g~f~~~v~~~~~~---~i~--v~Gk~ 140 (442)
+||+|.|+ |.||+.+++.+...+ +.++++|+ .+. +++.+.... +|...+ +.+.+.+ .+. +.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al~ag~-ni~~l~~~~~~f~~~~------v~v~d~~~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNL-DRYQVIALTANR-NVKDLADAAKRTNAKR------AVIADPSLYNDLKEALAGSS 76 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEEEESS-CHHHHHHHHHHTTCSE------EEESCGGGHHHHHHHTTTCS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEEEcCC-CHHHHHHHHHHcCCcE------EEEcChHHHHHHHHHhccCC
Confidence 79999996 999999999998764 35999988 432 344332222 121111 1000000 000 01111
Q ss_pred EEEEecC-CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 141 IQVVSNR-NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 141 I~v~~~~-~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
+.++... +..++- .+. +|+|+++++.+...+-+...+++|. -|+++
T Consensus 77 ~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aGK--~VvlA 123 (388)
T 1r0k_A 77 VEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKGK--TVALA 123 (388)
T ss_dssp SEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTTS--EEEEC
T ss_pred cEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCCC--EEEEe
Confidence 1222111 111111 123 7999999955667777777888884 44554
No 109
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.48 E-value=0.022 Score=53.32 Aligned_cols=96 Identities=21% Similarity=0.210 Sum_probs=62.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+.||+|.|.|.+|+.+++.+... . .+++||+-|. +++. .| -.++|-. +....
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~-dp~k----------~g-------------~~i~gv~--V~~~~ 131 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDV-DPEK----------VG-------------RPVRGGV--IEHVD 131 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEES-CTTT----------TT-------------CEETTEE--EEEGG
T ss_pred CCEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeC-CHHH----------Hh-------------hhhcCCe--eecHH
Confidence 47999999999999999863332 3 5999999885 2210 11 1133422 22222
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGK 193 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk 193 (442)
+..++ -.+ ++|.|+-|++.....+-+..-+++|.+-++.-.|-.
T Consensus 132 dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~ 175 (211)
T 2dt5_A 132 LLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVV 175 (211)
T ss_dssp GHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred hHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCccc
Confidence 22221 234 799999999987666777788889988665556653
No 110
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.43 E-value=0.017 Score=56.72 Aligned_cols=93 Identities=16% Similarity=0.208 Sum_probs=56.5
Q ss_pred CceeEEEEc-CChhHHH-HH----HHHHhCCCCCcEEE---------EEecCCChhhhhhhcccCcccccCCcceeeecC
Q 013492 67 AKLKVAING-FGRIGRN-FL----RCWHGRKDSPLEVV---------AINDTGGVKQASHLLKYDSTLGIFEADVKPVGT 131 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~-~l----r~l~~~~~~~~evv---------aInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~ 131 (442)
.++||||+| +|.+|+. .+ +++...+ .++++ +|.|.. ++....+. ..||.- +
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~av~~~~-~~~a~~~a---~~~~~~----~---- 70 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQG--GVRLKNGDRIMPDPILVGRS-AEKVEALA---KRFNIA----R---- 70 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHT--SEECTTSCEEEEEEEEECSS-SHHHHHHH---HHTTCC----C----
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcC--ceeecCCcccceeeEEEcCC-HHHHHHHH---HHhCCC----c----
Confidence 468999999 9999997 66 7776543 24432 677752 33222221 112210 0
Q ss_pred CcEEECCEEEEEEecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 132 DGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 132 ~~i~v~Gk~I~v~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
++ .+..++ -.+..+|+|+-||+.....+.+...+++|. .|++
T Consensus 71 -----------~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~ 112 (383)
T 3oqb_A 71 -----------WT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAGK-HVYC 112 (383)
T ss_dssp -----------EE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTTC-EEEE
T ss_pred -----------cc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCCC-eEEE
Confidence 01 011111 011268999999999999999999999994 4665
No 111
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.11 E-value=0.057 Score=54.24 Aligned_cols=92 Identities=22% Similarity=0.304 Sum_probs=57.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
|+||||+|+| +|+..++++...+ +.+|||||.|...-+ ...+- ..||. + ++ .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~~~~~-a~~~a---~~~gv-----~---------------~~--~ 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQGSAR-SRELA---HAFGI-----P---------------LY--T 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECCSSHH-HHHHH---HHTTC-----C---------------EE--S
T ss_pred CCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECCCHHH-HHHHH---HHhCC-----C---------------EE--C
Confidence 6899999999 7999999887654 359999999964322 11111 11221 1 11 1
Q ss_pred CCCCCCCCCccccEEEcCCCCCCC----HhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVD----REGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~----~e~a~~hl~aGAkkVIIsap 191 (442)
+..++. .++|+|+=+|+...- .+.+...+++|. .|++--|
T Consensus 59 ~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 59 SPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 223332 157888888887765 577888899986 4766544
No 112
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.34 E-value=0.071 Score=50.05 Aligned_cols=100 Identities=18% Similarity=0.269 Sum_probs=60.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+.||+|.|.|.+|+.+++.+... ...+++||+-|. +++. .| -.++|-. +....
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~-~~g~~iVg~~D~-dp~k----------~g-------------~~i~gv~--V~~~~ 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTK-NNNTKISMAFDI-NESK----------IG-------------TEVGGVP--VYNLD 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC-------CCEEEEEES-CTTT----------TT-------------CEETTEE--EEEGG
T ss_pred CCEEEEEccCHHHHHHHHHHhcc-cCCcEEEEEEeC-CHHH----------HH-------------hHhcCCe--eechh
Confidence 46899999999999999942222 235899999885 2221 11 1234432 22222
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCCCCCCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP 197 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsapsk~d~p 197 (442)
+..++- .+ . |+|+-|++.....+-+..-+++|.+.++.-+|-.-.+|
T Consensus 138 dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~l~vp 184 (215)
T 2vt3_A 138 DLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPARLNVP 184 (215)
T ss_dssp GHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCCCCCC
T ss_pred hHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCceeccCC
Confidence 222211 12 2 99999999877667778888999987877776543333
No 113
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.00 E-value=0.05 Score=54.54 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCC-CCCcEEEEEecC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRK-DSPLEVVAINDT 103 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~-~~~~evvaInd~ 103 (442)
.++||||.|+|.||+.+++.+..++ ..+++|++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 3589999999999999999998763 225899999984
No 114
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=93.79 E-value=0.073 Score=50.18 Aligned_cols=99 Identities=23% Similarity=0.253 Sum_probs=62.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+.||+|.|.|..|+.+++.+..+ ...+++||+=|. +++- ..|+ . .++| +.|..-.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~-~~g~~iVg~~D~-dp~~---------kiG~----------~--~i~G--vpV~~~~ 138 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHD-RNKMQISMAFDL-DSND---------LVGK----------T--TEDG--IPVYGIS 138 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCT-TSSEEEEEEEEC-TTST---------TTTC----------B--CTTC--CBEEEGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcc-cCCeEEEEEEeC-Cchh---------ccCc----------e--eECC--eEEeCHH
Confidence 46999999999999998874322 246999999874 2210 1121 0 0222 1222211
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPG 192 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsaps 192 (442)
+..++ -.+.++|+++-|++.....+-+..-.++|.|.++-=+|-
T Consensus 139 dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 139 TINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 11110 134589999999998777777888889999988766664
No 115
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.70 E-value=0.13 Score=50.63 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=55.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
+|||.|.|.|.||+.+++.|.++ .++.++.++ .+.+..+.+.- ..+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----~~~~~~~~~~~---------------~~~~~--------d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----NENLEKVKEFA---------------TPLKV--------DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----HHHHHHHTTTS---------------EEEEC--------CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----HHHHHHHhccC---------------CcEEE--------ecC
Confidence 47899999999999999988654 234443333 23222221110 01111 111
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
|+..+.=--.++|+||.|+|.|...+-++..+++|+ -+++..
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222111001278999999999988888889999998 456653
No 116
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.52 E-value=0.45 Score=43.56 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=28.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||.|-|.|.||+.+++.|.++. .+|+++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG---WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT---CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC---CEEEEEEc
Confidence 5679999999999999999998874 68888864
No 117
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.51 E-value=0.2 Score=47.18 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=26.6
Q ss_pred CceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||+|+|. |.+|+.+++.|.... .+|+.++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA---HHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS---SEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 4579999999 999999999998764 6877654
No 118
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.41 E-value=0.21 Score=48.58 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=26.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|.+||+|+|+|.||+.+++.|..... ..+|++.+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~d 65 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYD 65 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEE
Confidence 45799999999999999999987641 12776654
No 119
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.38 E-value=0.082 Score=44.75 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=29.9
Q ss_pred cccCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 64 AAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 64 ~~~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+.+++-+|.|.|+|++|+.+++.|..+. .+|++|..
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 38 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASD---IPLVVIET 38 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 3456678999999999999999998764 68888865
No 120
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.30 E-value=0.2 Score=42.83 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|.|.|+|+||+.+++.|..+. .+|+++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG---HSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998764 58877754
No 121
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.88 E-value=0.3 Score=43.23 Aligned_cols=31 Identities=26% Similarity=0.492 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 3899999 9999999999998764 68887764
No 122
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.86 E-value=0.19 Score=46.45 Aligned_cols=32 Identities=13% Similarity=0.333 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+||+|+|+|++|+.+++.+.... +++|.+-|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEeC
Confidence 58999999999999999988653 565556554
No 123
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=92.64 E-value=0.24 Score=51.94 Aligned_cols=103 Identities=14% Similarity=0.135 Sum_probs=66.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC---------CChhhhhhhcccCccc-ccCCcceeeecCCcEEECC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT---------GGVKQASHLLKYDSTL-GIFEADVKPVGTDGISVDG 138 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~---------~~~~~la~LlkyDSt~-g~f~~~v~~~~~~~i~v~G 138 (442)
.+|+|-|||-+|...++.|++.. -.||+|.|. .+.+.+..|+++-... |....- .+. +. +.
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~----~~~-~~-~a 323 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN---VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY----LNH-SS-TA 323 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT---CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG----GGT-CS-SC
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH----Hhh-cC-Cc
Confidence 58999999999999999998874 699999994 2444555555432211 221111 000 00 11
Q ss_pred EEEEEEecCCCCCCCCCCccccEEEcCC-CCCCCHhhHHHHHHcCCCeEEEe
Q 013492 139 KVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 139 k~I~v~~~~~p~~l~W~~~gvDiVie~T-G~f~~~e~a~~hl~aGAkkVIIs 189 (442)
+ .+. +.++ | ...+||.+-|+ +..++.+.|...++.+|| +|+-
T Consensus 324 ~---~v~---~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~E 366 (470)
T 2bma_A 324 K---YFP---NEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVGE 366 (470)
T ss_dssp E---ECS---SCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEEC
T ss_pred E---Eec---CcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEEe
Confidence 1 111 2233 8 57999999986 678889999988888897 4443
No 124
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.45 E-value=0.2 Score=43.73 Aligned_cols=31 Identities=39% Similarity=0.483 Sum_probs=26.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEc
Confidence 4799999 8999999999999874 68888765
No 125
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=92.20 E-value=0.39 Score=49.09 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=59.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhc-ccCcccccCCcceeeecCCcE--EECCEEEEEE
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLL-KYDSTLGIFEADVKPVGTDGI--SVDGKVIQVV 144 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~Ll-kyDSt~g~f~~~v~~~~~~~i--~v~Gk~I~v~ 144 (442)
.||+|.| +|.||++.++.+... +.++|+|+.--.+++.+.... +|...+ +-+.+.... .+... +.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~~l~~q~~~f~p~~------v~v~~~~~~~~~l~~~---~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLELAFKIVKEFNVKN------VAITGDVEFEDSSINV---WK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHHHHHHHHHHHTCCE------EEECSSCCCCCSSSEE---EE
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHHHHHHHHHHcCCCE------EEEccHHHHHHHHHHH---cc
Confidence 5899999 899999999999876 359999995433455443332 232211 100000000 00000 00
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
......++- ....+|+|+.++-.+...+-.-..+++| |+|.+
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaL 114 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCL 114 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEE
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 000000000 0125899999998888888777788888 44554
No 126
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=91.87 E-value=0.59 Score=40.44 Aligned_cols=84 Identities=24% Similarity=0.334 Sum_probs=55.7
Q ss_pred ceeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEE
Q 013492 68 KLKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQV 143 (442)
Q Consensus 68 ~ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v 143 (442)
+.+|||+|. |++|+.+++.+.+.. ++|..+|-.. +. +.|. .+
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G---~~V~~vnp~~-----------~~------------------i~G~--~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG---FEVLPVNPNY-----------DE------------------IEGL--KC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTTC-----------SE------------------ETTE--EC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC---CEEEEeCCCC-----------Ce------------------ECCe--ee
Confidence 358999998 999999999988764 6887777320 11 1231 12
Q ss_pred EecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 144 VSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 144 ~~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
+ .++.+++ ..+|+|+=+++.....+-...-+++|++.+++..
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2 2344454 2689999998854444445556678998887765
No 127
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=91.50 E-value=0.22 Score=49.28 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|||+||+.+++.+.... ++|++.+-
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg---~~v~~~d~ 172 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFG---MKVLCYDV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cEEEEECcchHHHHHHHhhcccC---ceeeecCC
Confidence 58999999999999999998764 89877653
No 128
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.15 E-value=0.44 Score=44.57 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=25.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
++||+|+|+|.+|+.+++.|.... ...+|++.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 368999999999999999987652 126766554
No 129
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.03 E-value=1.1 Score=40.18 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=27.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG---HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC---CeEEEEEC
Confidence 35899999 8999999999999874 68877764
No 130
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=90.92 E-value=0.45 Score=49.03 Aligned_cols=95 Identities=21% Similarity=0.303 Sum_probs=57.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHh-CCCCCcEEEEEecCC---------ChhhhhhhcccCcccccCCcceeeecCCcEEEC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAINDTG---------GVKQASHLLKYDSTLGIFEADVKPVGTDGISVD 137 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~-~~~~~~evvaInd~~---------~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~ 137 (442)
..+|+|-|||-+|+.+++.|.+ .. ..||+|.|.. +++.+..+. ..+|++.. ..+
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~G---akvVavsD~~G~i~dp~Gld~~~l~~~~---~~~g~l~~----y~~------ 272 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELG---SKVVAVSDSRGGIYNPEGFDVEELIRYK---KEHGTVVT----YPK------ 272 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECSSCEEECTTCCCHHHHHHHH---HHSSCSTT----CSS------
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcC---CEEEEEEeCCCeEECCCCCCHHHHHHHH---HhhCCccc----CCC------
Confidence 3689999999999999999987 53 8999999963 333222211 11222211 000
Q ss_pred CEEEEEEecCCCCCCCCCCccccEEEcCC-CCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 138 Gk~I~v~~~~~p~~l~W~~~gvDiVie~T-G~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
.+. +. +.++ |. ..+|+++.|+ +..++.+.|... +|| +|+.+
T Consensus 273 a~~---~~---~~ei-l~-~~~DIliP~A~~n~i~~~~a~~l---~ak-~V~Eg 314 (415)
T 2tmg_A 273 GER---IT---NEEL-LE-LDVDILVPAALEGAIHAGNAERI---KAK-AVVEG 314 (415)
T ss_dssp SEE---EC---HHHH-TT-CSCSEEEECSSTTSBCHHHHTTC---CCS-EEECC
T ss_pred ceE---cC---chhh-hc-CCCcEEEecCCcCccCcccHHHc---CCe-EEEeC
Confidence 111 11 1122 53 5899999996 567777777643 676 55544
No 131
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.88 E-value=0.45 Score=44.34 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=27.6
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 557999999 9999999999999874 68887764
No 132
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.84 E-value=0.38 Score=42.49 Aligned_cols=31 Identities=29% Similarity=0.372 Sum_probs=26.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEc
Confidence 5899999 9999999999999874 68877764
No 133
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.60 E-value=0.21 Score=49.91 Aligned_cols=31 Identities=32% Similarity=0.422 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFG---LAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998763 89887764
No 134
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.50 E-value=0.21 Score=49.43 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=27.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G---~~V~~~d~~ 173 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFG---MKVLCYDVV 173 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred ceEEEECcCHHHHHHHHHHHHCc---CEEEEECCC
Confidence 58999999999999999998764 898877643
No 135
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.43 E-value=0.54 Score=43.28 Aligned_cols=31 Identities=29% Similarity=0.505 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+||+|+|+|.+|..+++.|.... ++|.. .|.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g---~~V~~-~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG---VEVVT-SLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEE-CCT
T ss_pred CeEEEEechHHHHHHHHHHHHCC---CeEEE-eCC
Confidence 38999999999999999998763 57765 443
No 136
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=90.43 E-value=0.44 Score=49.65 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=65.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCC----------ChhhhhhhcccCccc-ccCCcceeeecCCcEEEC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG----------GVKQASHLLKYDSTL-GIFEADVKPVGTDGISVD 137 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~----------~~~~la~LlkyDSt~-g~f~~~v~~~~~~~i~v~ 137 (442)
.+|+|-|||-+|..+++.|++.. ..||+|.|.. +++.+..|+.|-... |.+..- .+ .+ +
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~~--~ 300 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG---AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-KF--G 300 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT---CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-HH--T
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-cc--C
Confidence 58999999999999999998764 7999999831 333344444332211 222110 00 00 1
Q ss_pred CEEEEEEecCCCCCCCCCCccccEEEcCC-CCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 138 Gk~I~v~~~~~p~~l~W~~~gvDiVie~T-G~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
.+.+ . +.++ | ...+|+.+-|+ +..++.+.|......|+| +|.-+
T Consensus 301 a~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~Eg 345 (449)
T 1bgv_A 301 VQFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIEV 345 (449)
T ss_dssp CEEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEECC
T ss_pred CEEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEEeC
Confidence 2222 2 2233 7 46899999986 778899999887777887 54433
No 137
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.41 E-value=0.24 Score=49.05 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G---~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALG---MHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CEEEEECC
Confidence 58999999999999999998764 89988774
No 138
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.26 E-value=0.21 Score=49.11 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G---~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWG---FPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 58999999999999999998763 78887764
No 139
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.06 E-value=0.25 Score=48.22 Aligned_cols=30 Identities=27% Similarity=0.334 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG---AQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEC
Confidence 58999999999999999998764 7877665
No 140
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=90.01 E-value=0.25 Score=48.69 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 176 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFG---AKVIAYDP 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998764 88876653
No 141
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=89.96 E-value=0.25 Score=49.30 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=26.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G---~~V~~~d~ 179 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMG---AKVIAYDV 179 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEEecCHHHHHHHHHHhhCC---CEEEEECC
Confidence 58999999999999999998764 89887764
No 142
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.94 E-value=0.26 Score=48.88 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFG---MKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhCC---CEEEEEcC
Confidence 58999999999999999998764 89887764
No 143
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=89.92 E-value=0.23 Score=46.00 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|.| +|.||+.+++.|..+. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEEC
Confidence 5899999 9999999999998874 67777754
No 144
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.91 E-value=0.26 Score=48.49 Aligned_cols=31 Identities=32% Similarity=0.528 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMG---ATVIGEDV 177 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998764 78877653
No 145
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.91 E-value=0.55 Score=43.30 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=27.1
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|+.||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG---EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 346899999 8999999999999874 57877754
No 146
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=89.75 E-value=0.24 Score=45.64 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=25.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| +|.||+.+++.|..++ ..+|+++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~--g~~V~~~~R 33 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH--IDHFHIGVR 33 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT--CTTEEEEES
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC--CCcEEEEEC
Confidence 4799999 9999999999988752 267777764
No 147
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=89.65 E-value=0.28 Score=49.09 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d~ 191 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFG---MNVLVWGR 191 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC---CEEEEECC
Confidence 58999999999999999998764 89887764
No 148
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=89.64 E-value=0.4 Score=46.35 Aligned_cols=87 Identities=17% Similarity=0.119 Sum_probs=56.4
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
++||+|.|+ |++|+..++.+.+.. +++|+.-+. +. . | . .+.| +.++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g---~~~V~~V~p---~~------~----g-----------~--~~~G--~~vy~- 54 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYG---TKMVGGVTP---GK------G----G-----------T--THLG--LPVFN- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECT---TC------T----T-----------C--EETT--EEEES-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCC---Cc------c----c-----------c--eeCC--eeccC-
Confidence 479999996 999999999887652 677644432 10 0 0 0 0223 12231
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..+++ .+..+|+|+.+|+.....+.+...+++|.+.+|+
T Consensus 55 -sl~el~-~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 55 -TVREAV-AATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp -SHHHHH-HHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred -CHHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 122221 0126899999999988888888899999986444
No 149
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=89.62 E-value=0.22 Score=46.64 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=27.0
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|+.||.|.| +|.||+.+++.|.++. .+|+++.-
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 43 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTR 43 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC---CcEEEEEC
Confidence 445899999 8999999999999874 57777654
No 150
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=89.60 E-value=0.29 Score=48.59 Aligned_cols=32 Identities=22% Similarity=0.397 Sum_probs=27.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G---~~V~~~d~~ 197 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFG---MKTIGYDPI 197 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECSS
T ss_pred CEEEEEeECHHHHHHHHHHHHCC---CEEEEECCC
Confidence 58999999999999999998653 898877643
No 151
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=89.59 E-value=0.28 Score=45.88 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=26.3
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+++|.|.| +|.||+.+++.|..+. .+|+++.-
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 36 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYAR 36 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEEC
Confidence 35899999 8999999999999874 57776654
No 152
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.31 E-value=0.43 Score=38.77 Aligned_cols=31 Identities=23% Similarity=0.496 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||+|.|+|++|+.+++.|.... .+|+.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998764 68777753
No 153
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.22 E-value=0.28 Score=49.46 Aligned_cols=32 Identities=22% Similarity=0.473 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG---~~V~~~d~~ 208 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFR---ARIRVFDPW 208 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSC---CEEEEECSS
T ss_pred CEEEEecCCcccHHHHHhhhhCC---CEEEEECCC
Confidence 48999999999999999887653 898876643
No 154
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=89.16 E-value=0.25 Score=48.83 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G---~~V~~~d~~ 177 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWG---ATLQYHEAK 177 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSC---CEEEEECSS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 58999999999999999887653 888777643
No 155
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.12 E-value=0.29 Score=48.99 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G---~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFG---CNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC---CEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCC---CEEEEeCC
Confidence 58999999999999999998763 88877664
No 156
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=89.11 E-value=0.36 Score=49.59 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=28.9
Q ss_pred eeEEEEcCChhHHHHHHHHHh-CCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHG-RKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~-~~~~~~evvaInd~ 103 (442)
.+|+|.|||+||+.+++.+.. .. ++|++++|.
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G---~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFG---MKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcC---CEEEEEeCC
Confidence 589999999999999999988 64 899999986
No 157
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=89.10 E-value=0.33 Score=47.50 Aligned_cols=31 Identities=23% Similarity=0.476 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD---MDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998653 78887765
No 158
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=89.06 E-value=1 Score=39.15 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=56.7
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE
Q 013492 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 69 ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
.+|||+|. |++|+.+++.+.... ++|..+|-.. .++. +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G---~~v~~vnp~~-------------------------~g~~--i~G~--~~~ 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG---YHVIPVSPKV-------------------------AGKT--LLGQ--QGY 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT---CCEEEECSSS-------------------------TTSE--ETTE--ECC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC---CEEEEeCCcc-------------------------cccc--cCCe--ecc
Confidence 47999998 899999999987654 6777776310 0011 1232 222
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
.++.+++ ..+|+|+=|++.....+-...-+++|+|.++++.
T Consensus 62 --~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 --ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp --SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3455665 2689999999865555555566678999888863
No 159
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=89.02 E-value=0.37 Score=49.71 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=29.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG 104 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~ 104 (442)
.+|+|-|||-+|+.+++.|++.. ..||+|.|..
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~ 245 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQG---GKVCAIAEWD 245 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEECCBCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEEecC
Confidence 68999999999999999998874 7999999964
No 160
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=88.82 E-value=0.28 Score=47.80 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG---MRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhhC---cEEEEEec
Confidence 58999999999999999998763 89887764
No 161
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.80 E-value=0.36 Score=45.21 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=24.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||+|.|+|.+|+.+++.|.... .+|..++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 35 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG---YSLVVSD 35 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred ccceEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 5679999999999999999998763 6765443
No 162
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.80 E-value=0.36 Score=47.02 Aligned_cols=32 Identities=22% Similarity=0.405 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+..
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~~ 174 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG---MNILLYDPY 174 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred ceEEEEccCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 58999999999999999998764 788777643
No 163
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=88.79 E-value=0.36 Score=48.15 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G---~~V~~~d~ 199 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFG---FNVLFYDP 199 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECT
T ss_pred CEEEEEeECHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998763 78877653
No 164
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=88.59 E-value=0.38 Score=47.02 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 175 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG---MRVVYHAR 175 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999998763 78776653
No 165
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=88.57 E-value=0.37 Score=47.41 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~~ 178 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG---AKVITYDIF 178 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 58999999999999999998764 788877643
No 166
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.56 E-value=0.44 Score=49.98 Aligned_cols=30 Identities=27% Similarity=0.488 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|+|.|+|.||+.+++.+.... ++|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G---a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG---ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999998764 6877665
No 167
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=88.56 E-value=0.38 Score=48.01 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 202 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFG---MSVRYWNR 202 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 58999999999999999988653 78876653
No 168
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.44 E-value=0.42 Score=39.78 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|.|.|+|++|+.+++.|.++. .+|+++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG---KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 48999999999999999998874 68877764
No 169
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=88.17 E-value=0.4 Score=48.82 Aligned_cols=30 Identities=13% Similarity=0.296 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALG---IRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC---CEEEEEC
Confidence 58999999999999999998764 8887765
No 170
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.08 E-value=0.43 Score=46.62 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=27.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~~ 174 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG---MKVLAYDIL 174 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 58999999999999999998764 788777643
No 171
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.04 E-value=0.41 Score=48.73 Aligned_cols=31 Identities=23% Similarity=0.217 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G---~~V~~~d~ 176 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLG---MYVYFYDI 176 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHCC---CEEEEEcC
Confidence 48999999999999999998764 89877663
No 172
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=87.79 E-value=0.44 Score=48.39 Aligned_cols=30 Identities=17% Similarity=0.378 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLG---WKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 58999999999999999998764 8887655
No 173
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=87.68 E-value=0.47 Score=47.01 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHH-hCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWH-GRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~-~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+. ... ++|++.+-
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G---~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG---MKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC---CEEEEECC
Confidence 58999999999999999987 653 78877654
No 174
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=87.57 E-value=1.5 Score=45.57 Aligned_cols=95 Identities=20% Similarity=0.410 Sum_probs=57.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCC---------ChhhhhhhcccCcccccCCcceeeecCCcEEECC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG---------GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDG 138 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~---------~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~G 138 (442)
..+|+|-|||-+|+.+++.|++.. ..||+|.|.. +++.+..+. ..+|.... ..+ .
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~G---akvVavsD~~G~i~dp~Gld~~~l~~~~---~~~g~i~~----y~~------a 298 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHG---ARVVAVQDHTGTVYNEAGIDPYDLLRHV---QEFGGVRG----YPK------A 298 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECSSCEEECTTCCCHHHHHHHH---HHTSSSTT----CTT------S
T ss_pred CCEEEEeccCHHHHHHHHHHHHCC---CEEEEEEcCCcEEECCCCCCHHHHHHHH---HhcCCccc----CCC------c
Confidence 368999999999999999998874 7999999963 333322221 11222111 000 1
Q ss_pred EEEEEEecCCCCCCCCCCccccEEEcCC-CCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 139 KVIQVVSNRNPVNLPWGDLGIDLVIEGT-GVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 139 k~I~v~~~~~p~~l~W~~~gvDiVie~T-G~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
+.+ . +.++ |. ..+|+++.|+ +..++.+.|... +|| +|+-+
T Consensus 299 ~~i---~---~~ei-~~-~~~DIlvPcA~~n~i~~~na~~l---~ak-~VvEg 339 (440)
T 3aog_A 299 EPL---P---AADF-WG-LPVEFLVPAALEKQITEQNAWRI---RAR-IVAEG 339 (440)
T ss_dssp EEC---C---HHHH-TT-CCCSEEEECSSSSCBCTTTGGGC---CCS-EEECC
T ss_pred eEc---C---chhh-hc-CCCcEEEecCCcCccchhhHHHc---CCc-EEEec
Confidence 111 1 1122 63 5799999996 456677777653 665 55544
No 175
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=87.39 E-value=0.36 Score=45.97 Aligned_cols=31 Identities=19% Similarity=0.139 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||.|.| +|.||+.+++.|..+. .+|+++..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R 42 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH---RPTYILAR 42 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CCEEEEEC
Confidence 5899999 8999999999998874 57777765
No 176
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=87.35 E-value=0.36 Score=48.51 Aligned_cols=98 Identities=12% Similarity=0.155 Sum_probs=53.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
.||+|.|.|.||+.+++.+..++ .+ ..|.+.+. +.+.+..+.+ .++.. .+..+.. +. ..-.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~v~~r-~~~~~~~la~---~l~~~-------~~~~~~~----~~-~D~~ 63 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHITLASR-TLSKCQEIAQ---SIKAK-------GYGEIDI----TT-VDAD 63 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEEEEES-CHHHHHHHHH---HHHHT-------TCCCCEE----EE-CCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEEEEEC-CHHHHHHHHH---Hhhhh-------cCCceEE----EE-ecCC
Confidence 48999999999999999998764 34 23444443 2222222210 01100 0000100 00 0011
Q ss_pred CCCCCC--CCCccccEEEcCCCCCCCHhhHHHHHHcCCC
Q 013492 148 NPVNLP--WGDLGIDLVIEGTGVFVDREGAGKHIQAGAK 184 (442)
Q Consensus 148 ~p~~l~--W~~~gvDiVie~TG~f~~~e~a~~hl~aGAk 184 (442)
++..+. ..+.++|+||.|+|.+...+-+...+++|..
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP 102 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC
Confidence 111110 0111479999999998877778888899986
No 177
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=87.09 E-value=0.39 Score=44.41 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||.|.| +|.||+.+++.|..+. .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 36 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG---HPTFLLVR 36 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEEC
Confidence 4899999 8999999999999874 57766643
No 178
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.95 E-value=0.48 Score=43.65 Aligned_cols=25 Identities=12% Similarity=0.307 Sum_probs=22.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
|++||+|+|+|.+|+.+++.|....
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCCeEEEECccHHHHHHHHHHHhCC
Confidence 4579999999999999999998763
No 179
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=86.94 E-value=1.1 Score=42.95 Aligned_cols=69 Identities=23% Similarity=0.241 Sum_probs=49.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
.+|-.|+| +||.||.+.++...+ +++||+.-|.. + .
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~---~~elv~~id~~-----------~------------~----------------- 48 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEK---GHELVLKVDVN-----------G------------V----------------- 48 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEEETT-----------E------------E-----------------
T ss_pred cceeEEEEecCHHHHHHHHHHhCC---CCEEEEEEcCC-----------C------------c-----------------
Confidence 46889999 799999998876433 48998875421 0 0
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeE
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKV 186 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkV 186 (442)
..+ . ++|+|||-|-.-...+.++..++.|..-|
T Consensus 49 ---~~l--~--~~DVvIDFT~P~a~~~~~~~~~~~g~~~V 81 (228)
T 1vm6_A 49 ---EEL--D--SPDVVIDFSSPEALPKTVDLCKKYRAGLV 81 (228)
T ss_dssp ---EEC--S--CCSEEEECSCGGGHHHHHHHHHHHTCEEE
T ss_pred ---ccc--c--CCCEEEECCCHHHHHHHHHHHHHcCCCEE
Confidence 011 1 46999988877777788888888998633
No 180
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=86.93 E-value=1.2 Score=38.43 Aligned_cols=86 Identities=13% Similarity=0.100 Sum_probs=57.1
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE
Q 013492 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 69 ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
-+|||+|. |+.|+.+++.+.+.. ++|..||- +. .++. +.|. .++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G---~~v~~vnp----~~-----~~~~------------------i~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVNP----RF-----QGEE------------------LFGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEECG----GG-----TTSE------------------ETTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC---CEEEEeCC----Cc-----ccCc------------------CCCE--Eec
Confidence 47999997 899999999988764 68877772 20 0111 2232 222
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeCC
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAP 191 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsap 191 (442)
.+..++| ..+|+|+=+++.....+-++.-.++|+|.++++.+
T Consensus 62 --~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 2344444 26899998888655555566677889999988753
No 181
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.78 E-value=0.56 Score=46.05 Aligned_cols=32 Identities=25% Similarity=0.462 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~~ 182 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN---MRILYYSRT 182 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCC---CEEEEECCC
Confidence 58999999999999999998764 788776643
No 182
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=86.77 E-value=0.48 Score=48.24 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=26.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d~~ 223 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD---VHLHYTDRH 223 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT---CEEEEECSS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC---CEEEEEcCC
Confidence 58999999999999999988753 888877643
No 183
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.76 E-value=0.44 Score=42.89 Aligned_cols=31 Identities=35% Similarity=0.339 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|.|+|++|+.+++.|..+. .+++.|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g---~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK---YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 48999999999999999998864 68887764
No 184
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=86.67 E-value=1.4 Score=38.14 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=56.4
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE
Q 013492 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 69 ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
.+|||+|. |++|+.+++.+.+.. ++|..||-.. +. +.|. .++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G---~~v~~Vnp~~-----------~~------------------i~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPKY-----------EE------------------VLGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTTC-----------SE------------------ETTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC---CEEEEECCCC-----------Ce------------------ECCe--ecc
Confidence 57999997 799999999888764 6887776310 11 1232 122
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
.+..++| ..+|+|+=+++.....+-++.-+++|+|.++++.
T Consensus 69 --~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 --PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp --SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred --CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 2344454 2689999998876555666667788999887763
No 185
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=86.63 E-value=0.49 Score=46.84 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|||+|+|+||+.+++.+.... ++|++.+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD---CPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEC
Confidence 48999999999999999998653 6776554
No 186
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=86.59 E-value=0.49 Score=46.32 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 186 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG---VQRFLYTG 186 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT---CCEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999988653 78777663
No 187
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=86.44 E-value=0.53 Score=46.33 Aligned_cols=31 Identities=26% Similarity=0.292 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG---VKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 58999999999999999987653 78876654
No 188
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=86.36 E-value=1.9 Score=36.87 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=58.1
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE
Q 013492 69 LKVAINGF----GRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 69 ikVaInGf----GrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
-+|||+|. |++|..+++.|.+.. ++|..||-. ++. |.|.+ .
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g---~~V~pVnP~-----------~~~------------------i~G~~--~- 49 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG---HEFIPVGRK-----------KGE------------------VLGKT--I- 49 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT---CCEEEESSS-----------CSE------------------ETTEE--C-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC---CeEEEECCC-----------CCc------------------CCCee--c-
Confidence 37999993 889999999998764 689889832 222 22321 1
Q ss_pred ecCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 145 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 145 ~~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
-++..++| . +|+|+=+++.....+-.+...+.|+|.|+++.
T Consensus 50 -y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~ 90 (122)
T 3ff4_A 50 -INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNP 90 (122)
T ss_dssp -BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECT
T ss_pred -cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECC
Confidence 23455665 2 89999988876666667777788999888764
No 189
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.30 E-value=0.68 Score=39.31 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|+|++|+.+++.|..+. .+|+.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG---QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 47999999999999999998764 67877764
No 190
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.01 E-value=0.61 Score=47.97 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G---~~V~~yd~ 187 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG---MTVRYYDT 187 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEECC
Confidence 48999999999999999998764 89877663
No 191
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.94 E-value=0.71 Score=44.00 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|+|.|+|+||+.+++.+.... ++|.+.+-
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG---AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 58999999999999999998764 68877764
No 192
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.81 E-value=0.72 Score=42.84 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=25.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||+|.|.|.+|..++..|.... .+|..++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC---CcEEEEEC
Confidence 3469999999999999999998764 57776653
No 193
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.57 E-value=0.53 Score=47.09 Aligned_cols=31 Identities=23% Similarity=0.210 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcE-EEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLE-VVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~e-vvaInd 102 (442)
.+|||+|+|+||+.+++.+.... ++ |++.+-
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G---~~~V~~~d~ 196 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN---PKELLYYDY 196 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC---CSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CcEEEEECC
Confidence 58999999999999999987653 75 776653
No 194
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.34 E-value=0.71 Score=41.94 Aligned_cols=31 Identities=29% Similarity=0.325 Sum_probs=25.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+||+|.|+|.+|+.+++.|.... .+|+.++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g---~~V~~~~ 58 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG---FKVVVGS 58 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 468999999999999999998763 5766655
No 195
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=85.21 E-value=0.48 Score=43.73 Aligned_cols=31 Identities=26% Similarity=0.233 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||.|.| +|.||+.+++.|.++. .+|+++.-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG---NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT---CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC---CcEEEEEC
Confidence 4799999 8999999999998764 56766643
No 196
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.21 E-value=0.81 Score=43.69 Aligned_cols=31 Identities=26% Similarity=0.328 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|+|.|+|+||+.+++.+.... ++|.+.+-
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG---ANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 58999999999999999998764 68877764
No 197
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.98 E-value=1.5 Score=42.26 Aligned_cols=82 Identities=18% Similarity=0.271 Sum_probs=49.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
-+|.|+|.|.||...+..+.... .+|+++... .+.+..+.+ +| .+.+ + .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~--~~~~~~~~~----lG----------a~~v---------~--~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG---AEVSVFARN--EHKKQDALS----MG----------VKHF---------Y--TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEECSS--STTHHHHHH----TT----------CSEE---------E--SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CeEEEEeCC--HHHHHHHHh----cC----------CCee---------c--CC
Confidence 37999999999999988887663 588877532 122222221 12 1111 1 12
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCC
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA 183 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGA 183 (442)
+..+ .+ ++|+||||+|.-...+.+-..++.|.
T Consensus 228 ~~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 228 PKQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp GGGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred HHHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 2222 22 89999999998756665655555544
No 198
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.97 E-value=0.81 Score=43.49 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=26.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+++||+|+|+|.+|+.+++.|.... .+|+..+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~d 37 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG---LSTWGAD 37 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 4579999999999999999998764 6877665
No 199
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.84 E-value=0.62 Score=40.55 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=26.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhC-CCCCcEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGR-KDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~-~~~~~evvaInd 102 (442)
..+|.|.|+|++|+.+++.|... . .+|+++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG---KISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC---SCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC---CeEEEEEC
Confidence 45899999999999999999765 4 67887764
No 200
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=84.70 E-value=0.91 Score=43.95 Aligned_cols=86 Identities=17% Similarity=0.163 Sum_probs=55.0
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEE-EEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~~~~~evv-aInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
..||+|.|. |+.|+.+++.+.+.. ++++ +||-.. . | . .+.| +.++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g---~~~v~~VnP~~-~-------------g-----------~--~i~G--~~vy~ 54 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYG---TKIVAGVTPGK-G-------------G-----------M--EVLG--VPVYD 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTTC-T-------------T-----------C--EETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcC---CeEEEEECCCC-C-------------C-----------c--eECC--EEeeC
Confidence 369999995 999999999887653 7766 455210 0 0 0 0233 22332
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..+++- +..+|+++.+++.....+.+...+++|.+.+|+
T Consensus 55 --sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 55 --TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp --SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 1122221 126899999999877777788888899986655
No 201
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=84.70 E-value=1.7 Score=45.54 Aligned_cols=104 Identities=15% Similarity=0.246 Sum_probs=62.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCC---------ChhhhhhhcccCccc-ccCCcceeeecCCcEEEC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG---------GVKQASHLLKYDSTL-GIFEADVKPVGTDGISVD 137 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~---------~~~~la~LlkyDSt~-g~f~~~v~~~~~~~i~v~ 137 (442)
..+|+|-|||-+|...++.|++.. -.||+|.|.. +++.+..+.++.... ++...-++ . . -+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~---~--~-~~ 309 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEKG---AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLK---Y--S-KT 309 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT---CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGG---T--C-SS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhh---c--C-CC
Confidence 358999999999999999988764 6788898842 344443332222111 11100000 0 0 01
Q ss_pred CEEEEEEecCCCCCCCCCCccccEEEcC-CCCCCCHhhHHHHHHcCCCeEEEe
Q 013492 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEG-TGVFVDREGAGKHIQAGAKKVLIT 189 (442)
Q Consensus 138 Gk~I~v~~~~~p~~l~W~~~gvDiVie~-TG~f~~~e~a~~hl~aGAkkVIIs 189 (442)
.+ .+. +.+ .|. ..+||.+=| ++.-++.+.|..-++.+|| +|+-
T Consensus 310 a~---~v~---~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~E 353 (456)
T 3r3j_A 310 AK---YFE---NQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIVE 353 (456)
T ss_dssp CE---EEC---SCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEEC
T ss_pred ce---EeC---Ccc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEEe
Confidence 11 112 222 264 589999998 5678899999887777886 5443
No 202
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=84.69 E-value=0.58 Score=42.62 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=27.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
++||+|.|.|.+|+.+++.|.... .+|+.+.|.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g---~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ---IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT---CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECC
Confidence 369999999999999999998763 677765654
No 203
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.89 E-value=0.66 Score=43.17 Aligned_cols=30 Identities=13% Similarity=0.212 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|+.+++.|.... .+|+.++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAG---HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTT---CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC---CEEEEEc
Confidence 69999999999999999998753 6776554
No 204
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.76 E-value=0.97 Score=42.28 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=25.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
++||+|.|+|.+|+.+++.|.... .+|+.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG---VTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 368999999999999999998753 6776554
No 205
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.48 E-value=0.74 Score=43.81 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=25.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
++||+|+|+|.+|+.+++.|.... .+|++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G---~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP---GGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST---TCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC---CeEEEEe
Confidence 469999999999999999988763 6776665
No 206
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=83.39 E-value=3.2 Score=42.99 Aligned_cols=34 Identities=26% Similarity=0.550 Sum_probs=29.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG 104 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~ 104 (442)
..+|+|-|||-+|+..++.|++.. ..||+|.|..
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G---akVVavsD~~ 254 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG---AKVIGISDAN 254 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT---CEEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCC
Confidence 468999999999999999998764 7999999953
No 207
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=83.32 E-value=0.98 Score=41.31 Aligned_cols=32 Identities=19% Similarity=0.422 Sum_probs=27.2
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 36 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEE---YDIYPFD 36 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTT---EEEEEEC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCC---CEEEEec
Confidence 677999999 8999999999998763 7888875
No 208
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.26 E-value=0.99 Score=41.43 Aligned_cols=31 Identities=19% Similarity=0.485 Sum_probs=24.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+||+|+|+|.+|+.+++.|.... .+|. +-|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g---~~v~-~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP---HELI-ISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS---CEEE-EECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC---CeEE-EECC
Confidence 69999999999999999987653 4554 4443
No 209
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=83.18 E-value=1.3 Score=41.55 Aligned_cols=34 Identities=18% Similarity=0.429 Sum_probs=28.2
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+||.|-| .|.||+.+++.|..+. ..++|++++.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSY-ETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHC-TTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhC-CCcEEEEEec
Confidence 36899999 8999999999998763 3488888875
No 210
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=82.79 E-value=1.4 Score=39.72 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=26.4
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+.+|.|-| .|.||+.+++.|..+. ..+|+++..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~R 56 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQ--TIKQTLFAR 56 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEES
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEEc
Confidence 45799999 9999999999998763 267776653
No 211
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=82.69 E-value=1.1 Score=43.39 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=25.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
|++||+|.|.|.+|..++.++.... .++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 4579999999999999998887763 247 555564
No 212
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.26 E-value=0.88 Score=47.30 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||||+|.|.+|..++..+.... ++|+..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG---~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG---IETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 48999999999999999988764 7877664
No 213
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=82.14 E-value=2.8 Score=42.17 Aligned_cols=31 Identities=19% Similarity=0.495 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|+|.|+|.||+.+++.|.+.. .+|+ +.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G---akVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG---AKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEE-EEcC
Confidence 47999999999999999998874 6887 7775
No 214
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.00 E-value=1.3 Score=42.76 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=26.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+||+|+|+|.+|+.+++.|.... ++|+..+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~d 61 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG---YALQVWN 61 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhCC---CeEEEEc
Confidence 369999999999999999998764 6877665
No 215
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.94 E-value=1.3 Score=40.98 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|+.+++.|.... .+|++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG---HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999998763 5777664
No 216
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=81.93 E-value=0.53 Score=44.80 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=27.6
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.++||+|+|.|.||..+.+.|.... .+|++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G---~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVG---HYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTT---CEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCC---CEEEEecC
Confidence 3469999999999999999998764 68877764
No 217
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=81.92 E-value=1.2 Score=46.66 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=27.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|||+|+|+||+.+++.+.... ++|++.+-.
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G---~~V~~~d~~ 174 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFG---AYVVAYDPY 174 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEECCC
Confidence 58999999999999999998763 788877643
No 218
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.78 E-value=1 Score=45.79 Aligned_cols=36 Identities=25% Similarity=0.453 Sum_probs=29.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhh
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQA 109 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~l 109 (442)
.+|.|.||||+|+.+++.|..+. .+|++|.. +++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g---~~vvvId~--d~~~v 40 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG---VKMVVLDH--DPDHI 40 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEEC--CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHH
Confidence 47999999999999999999874 78888864 34444
No 219
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=81.56 E-value=1.1 Score=36.30 Aligned_cols=30 Identities=30% Similarity=0.518 Sum_probs=24.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+|.|.|.|.+|+.+++.|.... .+|+.+..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMG---HEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT---CCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 6999999999999999998764 56666653
No 220
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=81.55 E-value=1.4 Score=41.40 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|+.+++.|.... .+|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG---CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CeEEEEc
Confidence 58999999999999999998764 6877554
No 221
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=81.33 E-value=1.5 Score=40.46 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=26.2
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+..||||+|+|.+|+.+++.|.... .+|+..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G---~~V~~~~ 49 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLG---HEVTIGT 49 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3469999999999999999998764 6776665
No 222
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=81.14 E-value=4.2 Score=36.83 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=25.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
||.|-| .|.||+.+++.|.++. +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTV-PASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhC-CCceEEEEEc
Confidence 578999 8999999999998761 1268877754
No 223
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=80.91 E-value=2.9 Score=43.13 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|+|-|||-+|+.+++.|++.. ..||+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~G---akVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMG---AKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEECC
Confidence 68999999999999999998764 899999996
No 224
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=80.81 E-value=1.3 Score=46.48 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|+|.|+|+||+.+++.+.... ++|++.+-
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G---~~V~v~d~ 308 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG---ATVWVTEI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998764 78776653
No 225
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.58 E-value=1.7 Score=41.64 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||+|+|+|.+|+.+++.|.... ++|+..+-
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G---~~V~~~dr 52 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG---FKVTVWNR 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCC---CeEEEEeC
Confidence 69999999999999999998764 68776653
No 226
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=80.46 E-value=1.3 Score=42.38 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=26.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+||||+|+|.+|+.+++.|.... ++|++.|
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G---~~V~~~d 39 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG---KRVAIWN 39 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 468999999999999999998764 6776665
No 227
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.37 E-value=1.5 Score=41.28 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|+.+++.|.... .+|+..+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 33 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG---YLLNVFD 33 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHhCC---CeEEEEc
Confidence 58999999999999999998764 6877664
No 228
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=80.15 E-value=3.2 Score=42.81 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=29.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|+|-|||-+|+.+++.|++.. ..||+|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~G---akVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLG---MRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 58999999999999999998864 799999986
No 229
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.11 E-value=1.7 Score=42.06 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=27.7
Q ss_pred cCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 66 ~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.|.+||||+|+|.+|..+++.|.... ..+|.+.+-
T Consensus 22 ~M~m~IgvIG~G~mG~~lA~~L~~~G--~~~V~~~dr 56 (317)
T 4ezb_A 22 SMMTTIAFIGFGEAAQSIAGGLGGRN--AARLAAYDL 56 (317)
T ss_dssp TSCCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECG
T ss_pred ccCCeEEEECccHHHHHHHHHHHHcC--CCeEEEEeC
Confidence 36679999999999999999998753 257776653
No 230
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=79.94 E-value=1.8 Score=39.23 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=24.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaI 100 (442)
.+||+|.|.|.+|..+++.|.... .+|..+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g---~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG---HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 468999999999999999998763 576544
No 231
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=79.90 E-value=1.5 Score=44.90 Aligned_cols=32 Identities=25% Similarity=0.436 Sum_probs=26.7
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||+|+|.|.+|..++.++.... .+|++++
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G---~~V~~~D 32 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG---ANVRCID 32 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC---CEEEEEE
Confidence 4579999999999999999998764 6887765
No 232
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=79.81 E-value=2 Score=38.04 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=25.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||+|.| .|.+|+.+++.|.... .+|+.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4899999 9999999999998763 68777653
No 233
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.73 E-value=1.7 Score=40.28 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|+|.+|+.+++.|..... ..+|++.+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 489999999999999999987531 23776654
No 234
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.42 E-value=1.7 Score=41.21 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=25.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
++||+|+|+|.+|+.+++.|.... .+|..++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g---~~V~~~~ 60 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG---HTVTVWN 60 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC---CEEEEEe
Confidence 368999999999999999998753 5765554
No 235
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=79.23 E-value=1.4 Score=40.98 Aligned_cols=30 Identities=13% Similarity=0.347 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|+.+++.|.... .+|...+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g---~~V~~~~ 30 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG---YPLIIYD 30 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT---CCEEEEC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC---CEEEEEe
Confidence 37999999999999999998763 5766554
No 236
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=78.78 E-value=1.3 Score=46.26 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|+|.|+|+||+.+++.+.... ++|++.+-
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G---~~Viv~d~ 288 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG---ARVYITEI 288 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc---CEEEEEeC
Confidence 58999999999999999998764 78877653
No 237
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=78.71 E-value=3.1 Score=40.31 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=26.2
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+++|.|-| +|.||+.+++.|..+. .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 35899999 9999999999998764 67777653
No 238
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.53 E-value=1.8 Score=43.02 Aligned_cols=31 Identities=23% Similarity=0.469 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||||+|+|.+|+.+++.|.... ++|++.|-
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr 53 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG---HECVVYDL 53 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHhCC---CEEEEEeC
Confidence 69999999999999999998864 68776653
No 239
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=78.25 E-value=11 Score=39.85 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=28.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
..+|+|-|||-+|+..++.|++.. ..||+|.|.
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~G---akVVavsDs 276 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFG---AKCITVGES 276 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 358999999999999999998864 699999873
No 240
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=78.18 E-value=4.3 Score=39.67 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=25.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
|++||+|.|.|.+|..++.++.... .++ |.+-|.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g--~~~-V~L~Di 46 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKD--LGD-VYMFDI 46 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCe-EEEEEC
Confidence 5579999999999999998887763 136 455554
No 241
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=77.87 E-value=1.6 Score=40.25 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|.|+|.+|+.+++.|.. . .+|+.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g---~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R---FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T---SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-C---CeEEEEe
Confidence 489999999999999999876 4 5765554
No 242
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=77.82 E-value=3.2 Score=43.25 Aligned_cols=102 Identities=18% Similarity=0.288 Sum_probs=61.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCC---------Chhhhhhhccc-CcccccCCcceeeecCCcEEEC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG---------GVKQASHLLKY-DSTLGIFEADVKPVGTDGISVD 137 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~---------~~~~la~Llky-DSt~g~f~~~v~~~~~~~i~v~ 137 (442)
..+|+|=|||-+|...++.|++.. -.||++.|.. +++.+..+++. .+..|+...-.+ + .+
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~--~-----~g 304 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFG---ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK--E-----FG 304 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH--H-----HT
T ss_pred CCEEEEeCCChHHHHHHHHHHhcC---CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc--c-----CC
Confidence 358999999999999999999874 6899998742 33444444321 111111100000 0 01
Q ss_pred CEEEEEEecCCCCCCCCCCccccEEEcC-CCCCCCHhhHHHHHHcCCCeEEE
Q 013492 138 GKVIQVVSNRNPVNLPWGDLGIDLVIEG-TGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 138 Gk~I~v~~~~~p~~l~W~~~gvDiVie~-TG~f~~~e~a~~hl~aGAkkVII 188 (442)
. ..+...+ .|. ..+||.+=| ++.-++.+.+..-...|+| +|+
T Consensus 305 ~---~~~~~~~----i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k-~Ia 347 (450)
T 4fcc_A 305 L---VYLEGQQ----PWS-VPVDIALPCATQNELDVDAAHQLIANGVK-AVA 347 (450)
T ss_dssp C---EEEETCC----GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred c---EEecCcc----ccc-CCccEEeeccccccccHHHHHHHHhcCce-EEe
Confidence 1 1122222 254 589999988 5778899999877777886 444
No 243
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=77.77 E-value=2.2 Score=41.30 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=54.7
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCCCCCcEEE-EEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~~~~~evv-aInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
+.||+|.|. |+.|+.+++.+.+.. +++| .|| . +.. ++ .+.| +.++.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g---~~~V~~Vn-P---~~~-----g~------------------~i~G--~~vy~ 60 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECG---TKIVGGVT-P---GKG-----GQ------------------NVHG--VPVFD 60 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC-T---TCT-----TC------------------EETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CeEEEEeC-C---CCC-----Cc------------------eECC--EeeeC
Confidence 468999995 999999999888753 5554 555 2 100 00 0223 22332
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..+++- +..+|+++.+++.....+.+...+++|.+.+|+
T Consensus 61 --sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi 100 (294)
T 2yv1_A 61 --TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVV 100 (294)
T ss_dssp --SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred --CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222221 126899999999887778888888999985554
No 244
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=77.75 E-value=2.9 Score=43.19 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=34.7
Q ss_pred cCceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhh
Q 013492 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASH 111 (442)
Q Consensus 66 ~~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~ 111 (442)
.|| +|.|.| +|-||.+.|+.+...+ ..|+|+|+.--.+++.++.
T Consensus 8 ~~k-~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aL~ag~nv~~L~~ 52 (406)
T 1q0q_A 8 GMK-QLTILGSTGSIGCSTLDVVRHNP-EHFRVVALVAGKNVTRMVE 52 (406)
T ss_dssp -CE-EEEEETTTSHHHHHHHHHHHHCT-TTEEEEEEEESSCHHHHHH
T ss_pred Cce-eEEEEccCcHHHHHHHHHHHhCC-CccEEEEEEcCCCHHHHHH
Confidence 354 899999 9999999999998875 3699999987545655443
No 245
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=77.69 E-value=1.9 Score=45.21 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|+|.|||+||+.+++.+.... ++|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG---a~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG---ARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999998874 7876553
No 246
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.35 E-value=2.2 Score=40.60 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|.|.|.+|..++..|.... .+|..++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~ 34 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG---QSVLAWD 34 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 69999999999999999887753 5776664
No 247
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=77.34 E-value=2.2 Score=40.66 Aligned_cols=32 Identities=22% Similarity=0.472 Sum_probs=25.5
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|..||+|+| +|.||..+++.|.... .+|..++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 445899999 9999999999998653 5665554
No 248
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.20 E-value=2.1 Score=41.81 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|.|.||...++.+.... .+|+++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG---SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 37999999999999999887764 57777653
No 249
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=77.08 E-value=2 Score=44.55 Aligned_cols=30 Identities=20% Similarity=0.415 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|+|+|+|+||+.+++.+.... ++|++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G---a~Viv~D 241 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG---ARVVVTE 241 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEC
Confidence 58999999999999999998764 7866543
No 250
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=77.02 E-value=2.4 Score=38.92 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||+|.|.|.+|..++..|.... .+|..++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG---HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CCEEEEEc
Confidence 48999999999999999998764 57776654
No 251
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.77 E-value=2.6 Score=36.91 Aligned_cols=31 Identities=32% Similarity=0.445 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEe
Confidence 4799999 8999999999999874 68887764
No 252
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=76.61 E-value=3.4 Score=40.12 Aligned_cols=86 Identities=17% Similarity=0.213 Sum_probs=55.2
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEE-EEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evv-aInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
+.||+|.| .|+.|+.+++.+.+.. +++| .|| . +.. ++. +.| +.++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g---~~~v~~Vn-P---~~~-----g~~------------------i~G--~~vy~ 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG---TKVVAGVT-P---GKG-----GSE------------------VHG--VPVYD 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEEC-T---TCT-----TCE------------------ETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CcEEEEeC-C---CCC-----Cce------------------ECC--EeeeC
Confidence 46899999 5999999999887753 6654 555 2 100 000 223 22332
Q ss_pred cCCCCCCCCCCcc-ccEEEcCCCCCCCHhhHHHHHHcCCCeEEE
Q 013492 146 NRNPVNLPWGDLG-IDLVIEGTGVFVDREGAGKHIQAGAKKVLI 188 (442)
Q Consensus 146 ~~~p~~l~W~~~g-vDiVie~TG~f~~~e~a~~hl~aGAkkVII 188 (442)
+..+++ .+.+ +|+++.+++.....+.++..+++|.+.+|+
T Consensus 61 --sl~el~-~~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi 101 (297)
T 2yv2_A 61 --SVKEAL-AEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV 101 (297)
T ss_dssp --SHHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred --CHHHHh-hcCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 122222 0113 899999999888888888889999995654
No 253
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=76.51 E-value=1.9 Score=41.47 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=26.6
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|.-|||++|+|.+|..+++.|.... ++|++-|
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G---~~V~v~d 35 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAG---YELVVWN 35 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTT---CEEEEC-
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCC---CeEEEEe
Confidence 6568999999999999999998764 7877655
No 254
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=76.49 E-value=1.1 Score=44.55 Aligned_cols=91 Identities=19% Similarity=0.193 Sum_probs=52.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
.||+|.|.|.+|+.+++.|... .+|...+ . +.+.+..+.+. ++ .+.+ ...+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~-R-~~~~a~~la~~---~~-------------------~~~~-d~~~ 67 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE----FDVYIGD-V-NNENLEKVKEF---AT-------------------PLKV-DASN 67 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----SEEEEEE-S-CHHHHHHHTTT---SE-------------------EEEC-CTTC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC----CeEEEEE-C-CHHHHHHHHhh---CC-------------------eEEE-ecCC
Confidence 5899999999999999998764 4654444 3 24433333210 00 0000 0011
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
+..+.=--.++|+||.|++.....+-+...+++|+ .+++.
T Consensus 68 ~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~ 107 (365)
T 2z2v_A 68 FDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDV 107 (365)
T ss_dssp HHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEEC
T ss_pred HHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEc
Confidence 11100000268999999987666666777888887 45553
No 255
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=76.42 E-value=2 Score=42.58 Aligned_cols=31 Identities=35% Similarity=0.480 Sum_probs=26.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
..||+|+|+|.||..+++.|.... .+|++.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G---~~V~~~d 38 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN---HSVFGYN 38 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC---CEEEEEe
Confidence 358999999999999999998764 6777665
No 256
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=76.00 E-value=2.5 Score=40.46 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=25.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG---HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 5689999999999999999887653 57766654
No 257
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=75.75 E-value=1.8 Score=44.40 Aligned_cols=40 Identities=18% Similarity=0.373 Sum_probs=30.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhh
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~L 112 (442)
.|||-|.|+|++|+.+++.|..++ .+|+.|.. +.+.+..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~---~~v~vId~--d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN---NDITIVDK--DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT---EEEEEEES--CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHHHHH
Confidence 479999999999999999987654 68888864 34444333
No 258
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=75.65 E-value=4.3 Score=44.18 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||||+|.|.+|..++..+.... ++|+..+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG---~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN---YPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC---CEEEEEE
Confidence 48999999999999999988763 6776665
No 259
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=75.49 E-value=2.2 Score=41.40 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=26.1
Q ss_pred Cce-eEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKL-KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~i-kVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++ ||+|+|.|.+|..++..|.... .+|..++.
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G---~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC---REVCVWHM 46 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE---EEEEEECS
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 445 9999999999999999887653 57766653
No 260
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=75.12 E-value=2.7 Score=40.26 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=25.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||+|.|.|.||..+...|. .. .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g---~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY---HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC---CceEEEEC
Confidence 6689999999999999998887 53 57666653
No 261
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=75.11 E-value=2.6 Score=42.45 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=27.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|+|.|||.||+.+++.+.+.. ++|+ +.|.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G---akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG---AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEE-EEeC
Confidence 48999999999999999998874 7888 8886
No 262
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=74.81 E-value=2.8 Score=40.27 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=26.6
Q ss_pred cCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 66 ~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.|.+||+|.|.|.+|..+++.|.... .+|..++-
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G---~~V~~~~r 45 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENG---EEVILWAR 45 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 47789999999999999999998753 57766654
No 263
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=74.69 E-value=3.1 Score=38.48 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=26.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| +|-||+.+++.|.++. .+|+++.-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999999875 68888764
No 264
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=76.70 E-value=0.62 Score=42.40 Aligned_cols=32 Identities=22% Similarity=0.088 Sum_probs=24.7
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+.+||+|+|+|.+|+.+++.|.... .+|..++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G---~~V~~~~ 49 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG---YSVVFGS 49 (201)
Confidence 4468999999999999999887653 4655443
No 265
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=74.41 E-value=1.9 Score=40.48 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|+.+++.|.... .+|...+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG---FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT---CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC---CeEEEEc
Confidence 48999999999999999998763 5766665
No 266
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=74.15 E-value=2.5 Score=41.29 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||+|+|+|.||+.+++.|.... ++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G---~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG---VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc---CEEEEEEC
Confidence 58999999999999999998763 67765554
No 267
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=74.11 E-value=2.9 Score=43.12 Aligned_cols=90 Identities=18% Similarity=0.120 Sum_probs=50.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN 148 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~~ 148 (442)
.||.|.|.|.+|+.+++.|..+. ..+|+.++-. .+.+..+.+. .+ +. .+.+ .-.+
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~--g~~V~v~~R~--~~ka~~la~~---~~-----~~------------~~~~-D~~d 78 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAAND--DINVTVACRT--LANAQALAKP---SG-----SK------------AISL-DVTD 78 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTST--TEEEEEEESS--HHHHHHHHGG---GT-----CE------------EEEC-CTTC
T ss_pred CEEEEECChHHHHHHHHHHHhCC--CCeEEEEECC--HHHHHHHHHh---cC-----Cc------------EEEE-ecCC
Confidence 58999999999999999998763 3687666642 3322222210 01 00 0000 0011
Q ss_pred CCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCC
Q 013492 149 PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA 183 (442)
Q Consensus 149 p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGA 183 (442)
+..+.-.-.++|+||.|||.+...+-+...+++|.
T Consensus 79 ~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 79 DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp HHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 11110000268999999998765544556677776
No 268
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=74.11 E-value=3.8 Score=34.99 Aligned_cols=31 Identities=29% Similarity=0.240 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEe
Confidence 5899999 8999999999998874 68877754
No 269
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.37 E-value=2.5 Score=40.60 Aligned_cols=30 Identities=17% Similarity=0.315 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
+||||+|+|.+|..+++.|.... . +|...+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G---~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAG---AIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS---CCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC---CCeEEEEc
Confidence 69999999999999999998763 5 665554
No 270
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=72.86 E-value=1.7 Score=36.54 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=24.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
..||+|.|.|.+|+.+++.|..+. ++ |.|-|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g---~~-v~v~~r 52 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ---YK-VTVAGR 52 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT---CE-EEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CE-EEEEcC
Confidence 358999999999999998887643 67 445443
No 271
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=72.45 E-value=16 Score=35.28 Aligned_cols=86 Identities=16% Similarity=0.095 Sum_probs=53.1
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCC-hhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEec
Q 013492 69 LKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGG-VKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSN 146 (442)
Q Consensus 69 ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~-~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~ 146 (442)
.||.++|.|.+|.. +++.|..+. .+|. +.|... +.....| +..++ .+...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G---~~V~-~~D~~~~~~~~~~L-----------------~~~gi-------~v~~g 56 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG---FEVS-GCDAKMYPPMSTQL-----------------EALGI-------DVYEG 56 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT---CEEE-EEESSCCTTHHHHH-----------------HHTTC-------EEEES
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC---CEEE-EEcCCCCcHHHHHH-----------------HhCCC-------EEECC
Confidence 48999999999996 788888875 5654 455321 1111111 11122 22223
Q ss_pred CCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCC
Q 013492 147 RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAK 184 (442)
Q Consensus 147 ~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAk 184 (442)
.+|.++.+ .++|+||=+.|.-.+.+......+.|.+
T Consensus 57 ~~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~ 92 (326)
T 3eag_A 57 FDAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP 92 (326)
T ss_dssp CCGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC
T ss_pred CCHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc
Confidence 45555431 2589999999987777666667778875
No 272
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=72.45 E-value=3.1 Score=43.18 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|+|.|||.||+.+++.+.... ++|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G---a~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG---SIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999998874 6766543
No 273
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=71.85 E-value=2.9 Score=42.93 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||||+|.|.+|+.+++.|.... ++|...|-
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G---~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 58999999999999999998764 57766654
No 274
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=71.71 E-value=1.2 Score=41.80 Aligned_cols=33 Identities=30% Similarity=0.468 Sum_probs=21.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
|++||+|+|.|.+|+.+++.|... ++|+.+.|.
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~----~~v~~v~~~ 33 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR----YEIGYILSR 33 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC--------CCCEECS
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc----CcEEEEEeC
Confidence 457999999999999999887543 466445543
No 275
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=71.62 E-value=2.9 Score=39.90 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=24.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||+|.|.|.+|..++..|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG---EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS---CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC---CeEEEEEc
Confidence 5679999999999999999887653 46655553
No 276
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=71.38 E-value=5.6 Score=32.87 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=29.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+.+|.|.|.|..|+.+++.+...+ .++++|+-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~--g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGK--EFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSS--SEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CcEEEEEEEC
Confidence 458999999999999999988753 5999998774
No 277
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=70.97 E-value=3.7 Score=40.11 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=19.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
|||+|.|.|.||..++-.+..++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~ 23 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNL 23 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC
Confidence 58999999999999987776553
No 278
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=70.95 E-value=3.2 Score=39.34 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=24.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
++||+|+|.|.+|+.+++.|.....+.-+|...+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~d 36 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTN 36 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEe
Confidence 3689999999999999999987641112555444
No 279
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=70.82 E-value=2.1 Score=40.51 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=23.2
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||+|.|.|.+|..+...|.... .+|..+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g---~~V~~~~ 32 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL---PHTTLIG 32 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC---TTCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 5679999999999999998887643 3444444
No 280
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=70.50 E-value=2.3 Score=41.65 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=50.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccCcccccCCcceeeecCCcE-EEC-CEEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYDSTLGIFEADVKPVGTDGI-SVD-GKVIQVVS 145 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i-~v~-Gk~I~v~~ 145 (442)
.||.|+|.|.+|..++..|..-.-+.+.| |.+ ..++..+...+-.....|+.+.++- .+.| .+| +-.|....
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~l--vD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa---~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLL--FDYDKVELANMNRLFFQPHQAGLSKVQAA---EHTLRNINPDVLFEVHN 111 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEE--ECCCBC------------CCTTSBHHHHH---HHHHHHHCTTSEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEE--ECCCccChhhcccccCChhhcCchHHHHH---HHHHHhhCCCcEEEEec
Confidence 58999999999999999887543222332 332 3344444443311223455443311 0111 011 11233332
Q ss_pred cC-CC-CCCC--C---------CCccccEEEcCCCCCCCHhhHHH-HHHcCCC
Q 013492 146 NR-NP-VNLP--W---------GDLGIDLVIEGTGVFVDREGAGK-HIQAGAK 184 (442)
Q Consensus 146 ~~-~p-~~l~--W---------~~~gvDiVie~TG~f~~~e~a~~-hl~aGAk 184 (442)
.+ ++ .+++ | ...++|+||+||..|.++..... ..+.|..
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P 164 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT 164 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC
Confidence 11 11 1110 0 01378999999999987754432 3344553
No 281
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=70.46 E-value=6 Score=40.43 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=24.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|.|.|.|.||+.+++.|.... .+|+.++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G---~~V~v~~ 33 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG---IKVTVAC 33 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEE
Confidence 47999999999999999998653 5765554
No 282
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=70.37 E-value=2.8 Score=39.12 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=26.2
Q ss_pred cCceeEEEEcCChhHHHHHHHHHhC-----CCCCcEEEEEec
Q 013492 66 QAKLKVAINGFGRIGRNFLRCWHGR-----KDSPLEVVAIND 102 (442)
Q Consensus 66 ~~~ikVaInGfGrIGr~~lr~l~~~-----~~~~~evvaInd 102 (442)
++++||+|.|.|.+|..++..|... . ..+|..++.
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g--~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDG--LLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTS--SEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCC--CCCEEEEEc
Confidence 4557999999999999999888754 2 147766653
No 283
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=70.17 E-value=5 Score=35.33 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=25.4
Q ss_pred ee-EEEEc-CChhHHHHHHHHH-hCCCCCcEEEEEec
Q 013492 69 LK-VAING-FGRIGRNFLRCWH-GRKDSPLEVVAIND 102 (442)
Q Consensus 69 ik-VaInG-fGrIGr~~lr~l~-~~~~~~~evvaInd 102 (442)
+| |.|-| .|.||+.+++.|. .+. .+|+++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD---MHITLYGR 38 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEES
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEec
Confidence 45 99999 9999999999998 653 68877754
No 284
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=70.04 E-value=26 Score=34.45 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|-|-| .|-||+.+++.|..+. .-+|+++..
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g--~~~V~~~~r 68 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRN--PQKLHVVDI 68 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTC--CSEEEEECS
T ss_pred CEEEEEcCChHHHHHHHHHHHHCC--CCEEEEEEC
Confidence 4799999 9999999999998863 247776654
No 285
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=69.97 E-value=3.5 Score=38.89 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||+|.|.|.+|..+++.|.... .+|..++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g---~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG---NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEEc
Confidence 48999999999999999887653 57776653
No 286
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=69.93 E-value=3.7 Score=37.49 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|.|.+|+.+++.|.... ..+|...+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQG--GYRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC--CCeEEEEC
Confidence 48999999999999999887642 13655444
No 287
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=69.91 E-value=6.1 Score=40.75 Aligned_cols=42 Identities=24% Similarity=0.358 Sum_probs=34.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhh
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASH 111 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~ 111 (442)
.||.|.| +|-||.+.|+.+...+ ..|+|+|+.- -.+++.++.
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aLaa~g~nv~~L~~ 65 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNP-DRFEVVGLAAGGAHLDTLLR 65 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEECSSCHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHhCC-CceEEEEEEecCCCHHHHHH
Confidence 4899999 9999999999998875 3699999987 546665443
No 288
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=69.60 E-value=4.9 Score=37.98 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|.|.+|..++..+.... ++|+.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 48999999999999999988763 6877665
No 289
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=68.75 E-value=4.5 Score=39.11 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=26.7
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|+ |||++|+|..|..+++.|.... ++|.+-|-
T Consensus 3 M~-kIgfIGlG~MG~~mA~~L~~~G---~~v~v~dr 34 (300)
T 3obb_A 3 MK-QIAFIGLGHMGAPMATNLLKAG---YLLNVFDL 34 (300)
T ss_dssp CC-EEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred cC-EEEEeeehHHHHHHHHHHHhCC---CeEEEEcC
Confidence 54 8999999999999999998764 78776664
No 290
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=68.53 E-value=3.8 Score=42.75 Aligned_cols=32 Identities=22% Similarity=0.405 Sum_probs=26.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++||||+|+|.+|..+++.|.... ++|++.|-
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G---~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999998764 68776654
No 291
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=68.42 E-value=4 Score=39.92 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|+|.|.||...++.+.... .+|+++..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAMG---AHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 37999999999999998887664 57776653
No 292
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=68.26 E-value=7.4 Score=37.98 Aligned_cols=30 Identities=27% Similarity=0.107 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...+..+.... . +|+++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG---ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999988887653 4 666663
No 293
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=68.26 E-value=3.8 Score=42.00 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=26.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++||||+|+|.+|+.+++.|.... ++|...|-
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G---~~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG---YTVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC---CEEEEEcC
Confidence 368999999999999999998764 57766653
No 294
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=67.78 E-value=5.1 Score=37.73 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|.|.+|+.+++.+.... ++|+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEe
Confidence 48999999999999999998764 6876654
No 295
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=67.74 E-value=5.1 Score=33.24 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=25.2
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|...|+|+|-|..|-..+..|..+. ++|+-+-
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G---~~V~v~E 32 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFD 32 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEE
Confidence 6788999999999999988887764 6665553
No 296
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=67.62 E-value=3 Score=37.64 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=24.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+.+|.|.|+|++|+.+++.|..+. . |++|.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g---~-v~vid 38 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSE---V-FVLAE 38 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSE---E-EEEES
T ss_pred CCCEEEEECCChHHHHHHHHHHhCC---e-EEEEE
Confidence 3458999999999999999987653 5 77664
No 297
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=67.35 E-value=5 Score=36.71 Aligned_cols=31 Identities=26% Similarity=0.415 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-|.|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG---HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999999874 68877764
No 298
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=66.97 E-value=4.1 Score=41.90 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||||+|.|.+|+.+++.|.... ++|...|-
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G---~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG---FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 48999999999999999998764 57766653
No 299
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=66.84 E-value=4.9 Score=39.53 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=25.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||+|.|.|.+|..++..|.... ..+|..+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTST--TEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCC--CCEEEEEe
Confidence 3479999999999999998886531 26776665
No 300
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=66.79 E-value=3.5 Score=39.92 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=24.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+|.|.|.|.||...+..+.... .+|+++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG---HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 7999999999999988776653 47777654
No 301
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=66.74 E-value=8.1 Score=38.10 Aligned_cols=30 Identities=23% Similarity=0.174 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...+..+.... . +|+++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG---ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999988887653 5 777764
No 302
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=66.70 E-value=3.4 Score=37.74 Aligned_cols=22 Identities=18% Similarity=0.441 Sum_probs=19.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGR 90 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~ 90 (442)
+||+|+|.|.+|..+++.|...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC
Confidence 5899999999999999988764
No 303
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=66.62 E-value=5.4 Score=39.59 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|+|.|+|+||+.+++.+.... ++|++++-
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d~ 199 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG---ATVTVLDI 199 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 58999999999999999998764 67776653
No 304
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=66.59 E-value=9.7 Score=37.86 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=20.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
.||+|.|.|.||..++.++..+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g 44 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKD 44 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 69999999999999998887653
No 305
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=66.40 E-value=5.8 Score=36.62 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=26.2
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|.+||.|-| .|.||+.+++.|..+. .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEc
Confidence 346899999 8999999999998864 6887765
No 306
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=66.21 E-value=4.9 Score=40.41 Aligned_cols=30 Identities=27% Similarity=0.629 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|||+|.|.|.+|..++.+|.... .+|++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G---~~V~~~d 30 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG---HEVIGVD 30 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999998764 6877764
No 307
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=66.09 E-value=4.4 Score=41.78 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=26.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|.||||+|.|.+|..+++.|.... ++|+..|-
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG---YTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT---CCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC---CeEEEEeC
Confidence 568999999999999999998763 67776664
No 308
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=66.01 E-value=4.6 Score=34.92 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=26.5
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|.+||.|.| .|.||+.+++.|.++.. ..+|+++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~ 38 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPA 38 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCB
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEe
Confidence 456899999 99999999999998741 12776654
No 309
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=65.57 E-value=5.9 Score=37.43 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=24.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCc--EEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~--evvaIn 101 (442)
++||+|.|.|.+|..++..|.... . +|+.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g---~~~~V~l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG---IAREIVLED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCCEEEEEe
Confidence 469999999999999998887653 4 665553
No 310
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=65.12 E-value=4.7 Score=41.87 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=27.9
Q ss_pred cCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 66 QAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 66 ~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.|..||||+|.|.+|..+++.|.... ++|...|-
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~dr 41 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG---FTVCAYNR 41 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 36679999999999999999998764 68776664
No 311
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=64.85 E-value=6.7 Score=36.22 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=25.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||.|-| .|.||+.+++.|..+. .+|+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG---DVELVLR 34 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT---TEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CeEEEEe
Confidence 6899999 9999999999998764 5776654
No 312
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=64.50 E-value=5.1 Score=41.15 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=27.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|++||+|+|.|.+|..++.+|.... ...+|++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g-~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 3469999999999999999887652 126888775
No 313
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=63.83 E-value=4.8 Score=41.01 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|+|+|.+|..++.+|.... ...+|++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g-~G~~V~~~d 37 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC-PEIRVTVVD 37 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 59999999999999999988652 126887775
No 314
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=63.71 E-value=6.8 Score=38.29 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=27.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||+|.|.|.+|+.+++++.... +++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G---~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG---YKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 48999999999999999998774 89998874
No 315
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=63.53 E-value=46 Score=31.94 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
-||.|.|.|.+||.++..|.... -+|..+|-.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G---~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG---LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 48999999999999999998764 577667754
No 316
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=63.03 E-value=7.6 Score=36.61 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|+|-|.||...+..+.... .+|+++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG---YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEE
Confidence 47999999999999988877653 5888886
No 317
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=63.02 E-value=8.8 Score=34.99 Aligned_cols=30 Identities=30% Similarity=0.695 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||.|-| +|.||+.+++.|.++. .+|+++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN---VEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS---EEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC---CeEEecc
Confidence 6899999 9999999999998763 7888775
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=62.43 E-value=4.1 Score=39.19 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...+..+.... . +|+++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 198 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG---AGRIFAVG 198 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CcEEEEEC
Confidence 37999999999999988877653 4 676664
No 319
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=62.16 E-value=6.4 Score=36.54 Aligned_cols=30 Identities=27% Similarity=0.250 Sum_probs=24.4
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
||+|.|.|.+|+.+++.|.... .+|...|-
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 8999999999999999998764 46655553
No 320
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.89 E-value=4.4 Score=38.85 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=24.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|.|.|.||...++.+.... . +|+++.
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 196 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASG---AGPILVSD 196 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999998887663 5 677665
No 321
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=61.82 E-value=8.6 Score=35.73 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG---HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEec
Confidence 5899999 9999999999999874 68887754
No 322
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=61.26 E-value=7.3 Score=39.21 Aligned_cols=30 Identities=23% Similarity=0.169 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|+|+||+.+++.+.... .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG---AIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 58999999999999999988764 5766554
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=61.22 E-value=6.3 Score=38.37 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|.|.|.||...+..+.... . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G---a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG---ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 47999999999999988877653 4 677764
No 324
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=61.02 E-value=7.4 Score=36.36 Aligned_cols=32 Identities=25% Similarity=0.212 Sum_probs=26.8
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|.++|-|-| .|.||+.+++.|.++. .+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG---YLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 556899999 9999999999998864 5777774
No 325
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=60.96 E-value=4.4 Score=38.94 Aligned_cols=30 Identities=20% Similarity=0.181 Sum_probs=24.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...++.+.... . +|+++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 199 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG---AYPVIVSE 199 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999999887763 4 676664
No 326
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=60.73 E-value=5.1 Score=38.72 Aligned_cols=31 Identities=29% Similarity=0.221 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|.|.||...+..+.... .+|+++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~~ 211 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG---AETYVISR 211 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 37999999999999988877653 57777763
No 327
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=60.55 E-value=8.3 Score=37.36 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|.|.||...+..+.... .+|+++..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G---a~Vi~~~~ 221 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG---AEVIVTSS 221 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEec
Confidence 37999999999999998887664 58877753
No 328
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=60.55 E-value=14 Score=34.83 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=23.9
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+|.|.|. |.||...++.+.... .+|+++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6999995 999999998887664 46777664
No 329
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=60.22 E-value=6.5 Score=39.34 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaInd 102 (442)
.+|+|.|+|.||+.+++.+.... + +|+++|-
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G---~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG---VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 48999999999999999988753 5 7777764
No 330
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=60.21 E-value=2 Score=40.89 Aligned_cols=23 Identities=30% Similarity=0.345 Sum_probs=19.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
-+|.|.|.|.+|...+..+....
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G 184 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG 184 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCcchHHHHHHHHcC
Confidence 37999999999999888777663
No 331
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=60.12 E-value=5.5 Score=36.53 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=26.8
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|.+||.|-| .|.||+.+++.|.++. +..+|+++.-
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLY-GTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence 456899999 8999999999998761 1257777753
No 332
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=59.22 E-value=10 Score=35.59 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=27.3
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+||.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 46899999 9999999999998874 68887764
No 333
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=59.11 E-value=4.5 Score=38.74 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|+|.|.||...+..+.... ..+|+++.-
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~ 204 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVS--AARVIAVDL 204 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--CCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC
Confidence 37999999999999888776542 257877743
No 334
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=59.10 E-value=8.6 Score=38.13 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|+|+||+.+++.+.... .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d 202 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG---AVVMATD 202 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 58999999999999999988764 5755554
No 335
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=58.98 E-value=8 Score=37.18 Aligned_cols=30 Identities=13% Similarity=0.139 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|.|.|.+|..++..|.... .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g---~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG---EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEE
Confidence 68999999999999999888753 4665554
No 336
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=58.32 E-value=7.1 Score=39.73 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|+|+||+.+++.+.... .+|++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG---AKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEEEEe
Confidence 58999999999999999988764 5766554
No 337
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=57.99 E-value=4.9 Score=38.96 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=22.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 70 KVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 70 kVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
+|.|+|.|.||...++.+.... . +|+++.
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~G---a~~Vi~~~ 222 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCG---ASIIIAVD 222 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 7999999999999888776553 4 576664
No 338
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=57.83 E-value=6.3 Score=37.99 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcE-EEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLE-VVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~e-vvaIn 101 (442)
-+|.|+|.|.||...+..+.... .+ |+++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG---ACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999998887664 44 65553
No 339
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=57.66 E-value=13 Score=36.41 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||+|.|-|.+|+.+++++.... ++++++..
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG---~~viv~d~ 43 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMG---YKVVVLDP 43 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 58999999999999999998874 89988853
No 340
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=57.49 E-value=8.1 Score=36.74 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.| .|.||...++.+.... .+|+++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG---AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 3799999 9999999999887764 58877764
No 341
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=57.38 E-value=10 Score=35.30 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=26.2
Q ss_pred cCceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 66 ~~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+|..||-|-| .|-||+.+++.|.++. .+|+++.
T Consensus 7 ~~~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~ 40 (338)
T 2rh8_A 7 IGKKTACVVGGTGFVASLLVKLLLQKG---YAVNTTV 40 (338)
T ss_dssp --CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEE
Confidence 3556899999 9999999999998874 6877654
No 342
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=57.05 E-value=10 Score=37.27 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|+|.|.|.||+.+++.+.... .+|++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG---AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEE
Confidence 58999999999999999998764 5777665
No 343
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=56.92 E-value=12 Score=36.00 Aligned_cols=32 Identities=13% Similarity=0.101 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHH-HHHH-HhCCCCCcE-EEEEecC
Q 013492 69 LKVAINGFGRIGRNF-LRCW-HGRKDSPLE-VVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~-lr~l-~~~~~~~~e-vvaInd~ 103 (442)
-+|.|+|.|.||... +..+ .... .+ |+++...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G---a~~Vi~~~~~ 208 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG---YENLYCLGRR 208 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC---CCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC---CcEEEEEeCC
Confidence 479999999999988 8877 5443 45 7777643
No 344
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=56.83 E-value=9.1 Score=36.30 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=27.3
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++||.|-| .|.||+.+++.|.+++ ..+|+++.-
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETT--DWEVFGMDM 57 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHS--SCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC--CCEEEEEeC
Confidence 35899999 9999999999998762 268888864
No 345
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=56.82 E-value=6.3 Score=37.86 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCC-CCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKD-SPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~-~~~evvaInd 102 (442)
+||+|+|.|.+|..+++.|..... ...+|...+-
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 589999999999999999986531 1146665553
No 346
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=56.48 E-value=14 Score=32.40 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=27.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
..+|.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEEc
Confidence 35899999 9999999999999873 1268877754
No 347
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=56.30 E-value=10 Score=36.74 Aligned_cols=40 Identities=28% Similarity=0.253 Sum_probs=29.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhc
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLL 113 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~Ll 113 (442)
..||||+|.|.+|..+++.+. .. ++|+..|- +++.+..+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG---~~V~v~d~--~~~~~~~~~ 51 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK---HEVVLQDV--SEKALEAAR 51 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS--CHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC---CEEEEEEC--CHHHHHHHH
Confidence 358999999999999999988 64 78877764 344444444
No 348
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=56.25 E-value=12 Score=39.48 Aligned_cols=42 Identities=29% Similarity=0.324 Sum_probs=32.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHh---CCCCCcEEEEEecCCChhhhhh
Q 013492 69 LKVAING-FGRIGRNFLRCWHG---RKDSPLEVVAINDTGGVKQASH 111 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~---~~~~~~evvaInd~~~~~~la~ 111 (442)
.||.|.| +|-||.+.|+.+.. .+ ..|+|+|+.--.+++.++.
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~p-d~f~V~aLaAg~Nv~lL~e 123 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIE-NVFNVKALYVNKSVNELYE 123 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHS-CCEEEEEEEESSCHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCC-CeEEEEEEEcCCCHHHHHH
Confidence 4799999 99999999999987 33 3599999987545555443
No 349
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=56.16 E-value=19 Score=33.81 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|-|+|.|.+|..-++.|.... -+|+.|+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G---A~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG---AAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC---CCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 48999999999999999998764 34444544
No 350
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=56.11 E-value=12 Score=36.28 Aligned_cols=30 Identities=13% Similarity=0.355 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...+..+.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG---AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 37999999999999998887663 4 677764
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=56.02 E-value=8.5 Score=36.83 Aligned_cols=30 Identities=33% Similarity=0.420 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|.|.|.||...++.+.... .+|+++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G---a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG---LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 47999999999999999887763 5877765
No 352
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=55.62 E-value=11 Score=34.32 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|.| .|.||+.+++.|. +. .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEecc
Confidence 3799999 8999999999988 53 68888753
No 353
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=55.56 E-value=6 Score=38.63 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.7
Q ss_pred CceeEEEEcCChhHHHHHHHHHhC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGR 90 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~ 90 (442)
|++||+|+|.|.+|..++..|...
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 556999999999999999988653
No 354
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.46 E-value=17 Score=34.87 Aligned_cols=30 Identities=23% Similarity=0.121 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|+|.|.||...++.+.... .+|+++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYG---AFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEc
Confidence 37999999999999998887664 5666664
No 355
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=55.14 E-value=9.5 Score=38.09 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|||+|.|.|.+|..++..|.. . .+|++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G---~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q---NEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T---SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC-C---CEEEEEE
Confidence 489999999999999998875 3 6887775
No 356
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=54.84 E-value=8.7 Score=37.21 Aligned_cols=29 Identities=14% Similarity=0.328 Sum_probs=22.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 70 KVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 70 kVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
+|.|.|.|.||...+..+.... . +|+++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG---ASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 7999999999999888776553 4 676664
No 357
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=54.84 E-value=11 Score=38.68 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.||+|+|+|+||+.+++.+.... .+|++ -|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG---a~V~v-~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG---AVVSA-TDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEE-ECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC---CEEEE-EcC
Confidence 69999999999999999998774 56554 443
No 358
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=54.59 E-value=7.2 Score=37.20 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|+|.|.||...++.+.... .+|+++.-
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~ 198 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG---LRVAAVDI 198 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 37999999999999998887764 58888753
No 359
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=54.24 E-value=13 Score=35.39 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=27.0
Q ss_pred cCceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 66 QAKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 66 ~~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.|+.+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 22 ~M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 56 (375)
T 1t2a_A 22 HMRNVALITGITGQDGSYLAEFLLEKG---YEVHGIVR 56 (375)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hcCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEEC
Confidence 3545899999 9999999999998864 68877754
No 360
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=54.10 E-value=11 Score=36.84 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=54.2
Q ss_pred eeEEEE-cC-ChhHHHHHHHHHhCCCCCcEEE-EEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 69 LKVAIN-GF-GRIGRNFLRCWHGRKDSPLEVV-AINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 69 ikVaIn-Gf-GrIGr~~lr~l~~~~~~~~evv-aInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
-+++|+ |+ |+.|+.+++.+.+.. ++++ .||-. . .+. .+.| +.++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G---~~~v~~VnP~----~---------------------~g~--~i~G--~~vy~ 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTPG----K---------------------GGK--THLG--LPVFN 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT----C---------------------TTC--EETT--EEEES
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCC---CcEEEEeCCC----c---------------------Ccc--eECC--eeeec
Confidence 357888 96 999999999887653 6765 45521 0 000 0233 23332
Q ss_pred cCCCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 146 NRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 146 ~~~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
+..+++ .+.++|+++-+++.....+-+...+++|+|.+|+=+
T Consensus 62 --sl~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t 103 (305)
T 2fp4_A 62 --TVKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCIT 103 (305)
T ss_dssp --SHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred --hHHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEEC
Confidence 122222 112689999999887777777888899999855433
No 361
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=54.01 E-value=1.4 Score=41.41 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=20.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
.||.|.|.|.+|..+++.|....
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~G 54 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAG 54 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CeEEEEeeCHHHHHHHHHHHHcC
Confidence 58999999999999999987653
No 362
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=53.61 E-value=11 Score=36.63 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=23.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|.|.|.||...+..+.... . +|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG---ASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 37999999999999988877653 4 677664
No 363
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=53.59 E-value=13 Score=35.68 Aligned_cols=30 Identities=33% Similarity=0.385 Sum_probs=24.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaI 100 (442)
++||+|.|.|.+|..++..|.... .+|..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG---HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC---CeEEEE
Confidence 479999999999999999888753 466666
No 364
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=53.43 E-value=36 Score=34.90 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=48.8
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAINGFGRIGRN-FLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInGfGrIGr~-~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
.||.|+|.|.+|.. +++.|..+. .+|. +.|.........|- ..++ +++...
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~-~~D~~~~~~~~~l~-----------------~~gi-------~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG---YQIS-GSDLAPNSVTQHLT-----------------ALGA-------QIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEE-EECSSCCHHHHHHH-----------------HTTC-------EEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC---CeEE-EEECCCCHHHHHHH-----------------HCCC-------EEECCC
Confidence 48999999999996 899998875 5654 55643222221211 1112 122223
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGA 183 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGA 183 (442)
++.++. ++|+||=+.|+-.+.+......+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 454442 68999999887665544444444554
No 365
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=53.04 E-value=15 Score=31.66 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=24.8
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
||||-|-| .|.||+.+++.|. +. .+|+++.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~ 33 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KK---AEVITAG 33 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TT---SEEEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEe
Confidence 35799999 9999999999998 64 6777664
No 366
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=52.83 E-value=10 Score=39.06 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP---VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 58999999999999999998864 67777764
No 367
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=52.78 E-value=14 Score=33.93 Aligned_cols=31 Identities=23% Similarity=0.469 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|-||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 4799999 8999999999999874 68877753
No 368
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=52.48 E-value=11 Score=35.88 Aligned_cols=43 Identities=14% Similarity=0.273 Sum_probs=32.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhc
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLL 113 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~Ll 113 (442)
|||.|-| .|.||+.+++.|.++. .++|+++.-..+.+.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHh
Confidence 4899999 9999999999998874 25877664324666665555
No 369
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=52.33 E-value=11 Score=35.51 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||+|.|.|.+|+.+++.|.... .+|...|-
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g---~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG---AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC---CEEEEEEC
Confidence 58999999999999999998763 47665554
No 370
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=51.93 E-value=13 Score=38.35 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=26.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+||+|+|.|.+|..++.+|.... .+|++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d 38 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLD 38 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEE
Confidence 369999999999999999998764 6887775
No 371
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=51.85 E-value=11 Score=36.36 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|.|.|.||...++.+.... . +|+++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG---AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 37999999999999998887653 4 677764
No 372
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=51.76 E-value=11 Score=36.71 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=49.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEecC
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNR 147 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~~~ 147 (442)
-+|.|+| .|.||...+.++.... ..+|+++... .+.+..+.+ +|. + ..++-+. .+. .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~--~~~~~~~~~----lGa---d--------~vi~~~~-~~~--~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRT--DLTVIATASR--PETQEWVKS----LGA---H--------HVIDHSK-PLA--A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECSS--HHHHHHHHH----TTC---S--------EEECTTS-CHH--H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeCC--HHHHHHHHH----cCC---C--------EEEeCCC-CHH--H
Confidence 4799999 9999999888776521 2588777542 333323221 220 1 0111100 000 0
Q ss_pred CCCCCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAK 184 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAk 184 (442)
...++ ...++|+||||+|.-...+.+-.++..|.+
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGR 265 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCE
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCE
Confidence 00111 234899999999964334455566666653
No 373
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=51.45 E-value=15 Score=34.98 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=26.7
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|+.+|.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r 60 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG---YEVHGLIR 60 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC---CEEEEEec
Confidence 545899999 8999999999998864 68877754
No 374
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=51.29 E-value=10 Score=36.60 Aligned_cols=30 Identities=13% Similarity=0.279 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|.|.|.||...++.+.... . +|+++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G---a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG---ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 37999999999999988776553 4 677664
No 375
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=51.28 E-value=13 Score=36.39 Aligned_cols=39 Identities=21% Similarity=0.246 Sum_probs=28.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhh
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHL 112 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~L 112 (442)
.||||+|.|.+|..++..+.... ++|+..+ . +++.+..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d-~-~~~~~~~~ 45 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVKLYD-I-EPRQITGA 45 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEC-S-CHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC---CEEEEEe-C-CHHHHHHH
Confidence 48999999999999999888764 6766554 3 34444333
No 376
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=51.20 E-value=8.6 Score=40.40 Aligned_cols=93 Identities=26% Similarity=0.333 Sum_probs=52.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCc---EEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL---EVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV 144 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~---evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~ 144 (442)
+.||.|.|+|-||+.+++.+..+.+ + +|+.+ |..... ..+. +- .| +.+ ..++|.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~d--v~~~~I~va-D~~~~~--~~~~--~~-~g-------------~~~--~~~~Vd 69 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFD--IKPSQVTII-AAEGTK--VDVA--QQ-YG-------------VSF--KLQQIT 69 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBC--CCGGGEEEE-ESSCCS--CCHH--HH-HT-------------CEE--EECCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC--CceeEEEEe-ccchhh--hhHH--hh-cC-------------Cce--eEEecc
Confidence 4689999999999999999987743 4 45544 321110 0011 00 01 000 000110
Q ss_pred ecCC----CC-CCCCCCccccEEEcCCCCCCCHhhHHHHHHcCCCeEEEeC
Q 013492 145 SNRN----PV-NLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITA 190 (442)
Q Consensus 145 ~~~~----p~-~l~W~~~gvDiVie~TG~f~~~e~a~~hl~aGAkkVIIsa 190 (442)
..| .. -| ++ + |+||.++-.+.+..-++..+++|+ -.|+.
T Consensus 70 -adnv~~~l~aLl--~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDT 113 (480)
T 2ph5_A 70 -PQNYLEVIGSTL--EE-N-DFLIDVSIGISSLALIILCNQKGA--LYINA 113 (480)
T ss_dssp -TTTHHHHTGGGC--CT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEES
T ss_pred -chhHHHHHHHHh--cC-C-CEEEECCccccCHHHHHHHHHcCC--CEEEC
Confidence 011 11 12 22 3 999998878888888899999999 44554
No 377
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=51.12 E-value=13 Score=34.66 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=26.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||+|.|-| .|+.+++++..+. ++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G---~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG---FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT---CCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC---CEEEEEEC
Confidence 56899999999 9999999998874 78877753
No 378
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=51.02 E-value=28 Score=31.92 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=25.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+.+|.|+|-|..|-..+..|..+. ++|+-|..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g---~~v~vie~ 34 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG---LSYVILDA 34 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS---CCEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 368999999999999999888764 67666653
No 379
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=50.80 E-value=16 Score=33.84 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=26.8
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeC
Confidence 36899999 9999999999998874 68888764
No 380
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=50.58 E-value=13 Score=36.71 Aligned_cols=31 Identities=23% Similarity=0.204 Sum_probs=24.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
++||+|.|.|.+|..++..|.... .+|...+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G---~~V~l~~ 59 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG---QKVRLWS 59 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 469999999999999999988753 4555443
No 381
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=50.10 E-value=13 Score=35.60 Aligned_cols=24 Identities=29% Similarity=0.378 Sum_probs=20.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
++||+|.|.|.+|..++..+....
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g 27 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDN 27 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 368999999999999999887653
No 382
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=49.98 E-value=6.9 Score=35.47 Aligned_cols=33 Identities=15% Similarity=0.098 Sum_probs=26.1
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|+.+|.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSDI 34 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE---EEEEECCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 345899999 8999999999988763 67766643
No 383
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=49.35 E-value=7.2 Score=37.02 Aligned_cols=31 Identities=6% Similarity=0.040 Sum_probs=24.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.| .|.||...++.+.... .+|+++..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 173 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG---AKLIGTVS 173 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 3799999 8999999998887653 57877753
No 384
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=49.35 E-value=25 Score=34.75 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=20.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
..||+|.|.|.||..++..+..+.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~ 42 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKD 42 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 369999999999999988887663
No 385
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=49.32 E-value=18 Score=33.50 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 4899999 9999999999998864 68877753
No 386
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=49.23 E-value=15 Score=37.85 Aligned_cols=29 Identities=31% Similarity=0.395 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|.|.|.+|..++.++.. . .+|++++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G---~~V~~~D 65 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-N---HEVVALD 65 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-T---SEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHc-C---CeEEEEe
Confidence 699999999999999988765 3 7888775
No 387
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=49.03 E-value=8.7 Score=37.17 Aligned_cols=31 Identities=35% Similarity=0.350 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|.|.||..+++.+.... .+|+++.-
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG---LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 47999999999999998887653 47877754
No 388
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=49.00 E-value=15 Score=35.14 Aligned_cols=34 Identities=24% Similarity=0.401 Sum_probs=25.3
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCC----CCcEEEEEe
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKD----SPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~----~~~evvaIn 101 (442)
++||.|.| .|.||+.+++.|..+.. ...+|+.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 47999999 69999999998887531 012777664
No 389
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=48.52 E-value=11 Score=36.44 Aligned_cols=30 Identities=30% Similarity=0.277 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...+..+.... . +|+++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 203 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMG---AAQVVVTD 203 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 37999999999999988877653 4 777765
No 390
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=48.40 E-value=13 Score=36.07 Aligned_cols=30 Identities=23% Similarity=0.301 Sum_probs=24.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|.| .|.||...+..+.... .+|+++.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~ 215 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD---AHVTAVC 215 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 3799999 8999999998887763 5777765
No 391
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=48.02 E-value=22 Score=35.15 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=55.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec-CCChhhhhhhcccC-cccccCCcceeeecCCcEEEC-CEEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND-TGGVKQASHLLKYD-STLGIFEADVKPVGTDGISVD-GKVIQVV 144 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd-~~~~~~la~LlkyD-St~g~f~~~v~~~~~~~i~v~-Gk~I~v~ 144 (442)
.-||.|.|.|.+|..++..|....-+.+.| |.+ ..+...+..-+-|. ...|+.+.++- ...--.+| +-.+...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~l--vD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~--~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIIL--IDNDQIENTNLTRQVLFSEDDVGKNKTEVI--KRELLKRNSEISVSEI 193 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEE--EECCBCCGGGGGTCTTCCGGGTTSBHHHHH--HHHHHHHCTTSEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEE--ECCCcCcccccccccCCChHHCCChHHHHH--HHHHHHHCCCCeEEEe
Confidence 358999999999999999887653223333 332 33454444332222 12354433211 00000011 1122332
Q ss_pred ecC-CCCC-CCCCCccccEEEcCCCCCC-CHhhH-HHHHHcCCC
Q 013492 145 SNR-NPVN-LPWGDLGIDLVIEGTGVFV-DREGA-GKHIQAGAK 184 (442)
Q Consensus 145 ~~~-~p~~-l~W~~~gvDiVie~TG~f~-~~e~a-~~hl~aGAk 184 (442)
..+ ++.+ +.- -.+.|+||+|+..+. ++... ....+.|..
T Consensus 194 ~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p 236 (353)
T 3h5n_A 194 ALNINDYTDLHK-VPEADIWVVSADHPFNLINWVNKYCVRANQP 236 (353)
T ss_dssp ECCCCSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCC
T ss_pred ecccCchhhhhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCC
Confidence 221 1111 111 237899999999887 55433 234455553
No 392
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=47.79 E-value=29 Score=34.57 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=53.8
Q ss_pred ceeEEEEc-CChhHHHHHHH--HHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEE--EE
Q 013492 68 KLKVAING-FGRIGRNFLRC--WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKV--IQ 142 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~--l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~--I~ 142 (442)
.+||-|.| .|+.+++++.. +.+|+ +.++||.-+...- + || ..+.++.+. +.
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~--~~~vVagV~P~~~---------g--~~-----------~~v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRD--EPSVAAMVYPFTG---------D--HK-----------QKFYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCS--SCSEEEEECTTSC---------S--EE-----------EEEEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCC--CceEEEEEcCCCC---------C--cc-----------ceEeccCccCCce
Confidence 47999999 79999988876 33443 4888887764210 0 00 111122222 34
Q ss_pred EEecCCCCCCCCCCc-cccEEEcCCCCCCCHhhHHHHHH-cCCCeEEE-eC
Q 013492 143 VVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQ-AGAKKVLI-TA 190 (442)
Q Consensus 143 v~~~~~p~~l~W~~~-gvDiVie~TG~f~~~e~a~~hl~-aGAkkVII-sa 190 (442)
++. +..+++ ... ++|++|.+++.....+.+...+. +|.|-||+ |.
T Consensus 66 vy~--sv~ea~-~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 66 VFK--NMADAM-RKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp EES--SHHHHH-HHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eeC--CHHHHh-hcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 442 111111 011 57999998876544444445555 78887766 54
No 393
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=47.79 E-value=14 Score=35.66 Aligned_cols=30 Identities=30% Similarity=0.520 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~--evvaIn 101 (442)
+||+|.|.|.+|..++..|.... + +|+.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g---~~~~V~l~D 32 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG---FAREMVLID 32 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCeEEEEe
Confidence 48999999999999998887653 4 665553
No 394
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=47.56 E-value=15 Score=37.90 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.7
Q ss_pred ccCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 65 AQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 65 ~~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
..++.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~---~~vvvid~ 158 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRN---HLFVVVTD 158 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTT---CCEEEEES
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCC---CCEEEEEC
Confidence 445678999999999999999987764 67887864
No 395
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=47.40 E-value=17 Score=33.35 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|.|-| +|.||+.+++.|.++. ..+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~R 38 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDG--TFKVRVVTR 38 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--SSEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhcC--CceEEEEEc
Confidence 5899999 8999999999998763 268887764
No 396
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=47.16 E-value=12 Score=35.63 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHhC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGR 90 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~ 90 (442)
++||+|.|.|.+|..++..|...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 36999999999999999988754
No 397
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=47.16 E-value=20 Score=34.43 Aligned_cols=31 Identities=29% Similarity=0.279 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 61 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEG---HYVIASDW 61 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEECCccHHHHHHHHHHHHCC---CeEEEEEC
Confidence 5899999 8999999999998874 68887764
No 398
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=47.13 E-value=20 Score=33.18 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|..++ ..+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 3799999 8999999999998862 268887764
No 399
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=47.10 E-value=19 Score=33.37 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||.|-| .|.||+.+++.|..+. .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEe
Confidence 4799999 9999999999998864 6888775
No 400
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=46.96 E-value=19 Score=38.99 Aligned_cols=111 Identities=17% Similarity=0.166 Sum_probs=56.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe-cCCChhhhhhhcccC-cccccCCcceeeecCCcE-EEC-CEEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN-DTGGVKQASHLLKYD-STLGIFEADVKPVGTDGI-SVD-GKVIQV 143 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn-d~~~~~~la~LlkyD-St~g~f~~~v~~~~~~~i-~v~-Gk~I~v 143 (442)
..||.|+|.|.+|-.++..|..-.-+.+. -|. |..++..+..-+-|. ...|+.++.+-. +.| .+| +-.|..
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~It--lvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa---~~L~~iNP~v~V~a 91 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHID--LIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAK---ESVLQFYPKANIVA 91 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEE--EEECCBCCGGGGGTCTTCCGGGTTSBHHHHHH---HHHHTTCTTCEEEE
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEE--EecCCEEChhhcCCCcCCChhHcChHHHHHHH---HHHHHHCCCCeEEE
Confidence 36899999999999999988764322233 233 244555554432222 234655443210 000 011 122333
Q ss_pred EecC-CCCCCC--CCCccccEEEcCCCCCCCHhhHHH-HHHcCCC
Q 013492 144 VSNR-NPVNLP--WGDLGIDLVIEGTGVFVDREGAGK-HIQAGAK 184 (442)
Q Consensus 144 ~~~~-~p~~l~--W~~~gvDiVie~TG~f~~~e~a~~-hl~aGAk 184 (442)
+..+ ++.++. + -.+.|+||+|+..+..+..... ..+.|..
T Consensus 92 ~~~~i~~~~~~~~~-~~~~DlVvda~Dn~~aR~~ln~~c~~~~iP 135 (640)
T 1y8q_B 92 YHDSIMNPDYNVEF-FRQFILVMNALDNRAARNHVNRMCLAADVP 135 (640)
T ss_dssp EESCTTSTTSCHHH-HTTCSEEEECCSCHHHHHHHHHHHHHHTCC
T ss_pred EecccchhhhhHhh-hcCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 3321 112221 1 1378999999998766544332 2334543
No 401
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=46.88 E-value=20 Score=33.58 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMDG---HEVTVVDN 59 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998874 68887764
No 402
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=46.69 E-value=17 Score=35.35 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=24.9
Q ss_pred CceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+++||+|.| .|.||..++..|..+. .--+|+.+.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g-~~~ev~l~D 41 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNP-LVSVLHLYD 41 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCT-TEEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC-CCCEEEEEe
Confidence 347999999 8999999999887753 113666553
No 403
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=46.32 E-value=17 Score=35.08 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=23.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEE
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaI 100 (442)
++.||+|.|.|.||..++..+..+.- --+|+.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~ 37 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI-ADEIVLI 37 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEE
Confidence 34699999999999999988765431 1155554
No 404
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=46.21 E-value=18 Score=35.45 Aligned_cols=30 Identities=23% Similarity=0.106 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaIn 101 (442)
-+|.|+|.|.||...++.+.... . +|+++.
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 217 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLLG---AACVIVGD 217 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 37999999999999888776553 4 677765
No 405
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=46.17 E-value=57 Score=33.20 Aligned_cols=93 Identities=14% Similarity=-0.025 Sum_probs=52.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCChhhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEE-ecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVV-SNR 147 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~-~~~ 147 (442)
.||.|+|.|++|..-++.|.+.. -+|..|......+ +..+. +...+ .+. ..-
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g---a~V~vi~~~~~~~-~~~l~----------------~~~~i-------~~~~~~~ 65 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG---ARLTVNALTFIPQ-FTVWA----------------NEGML-------TLVEGPF 65 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---BEEEEEESSCCHH-HHHHH----------------TTTSC-------EEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEcCCCCHH-HHHHH----------------hcCCE-------EEEECCC
Confidence 48999999999999999998864 4555555422222 22221 11111 111 111
Q ss_pred CCCCCCCCCccccEEEcCCCCC-CCHhhHHHHHHcCCCeEEEeCCC
Q 013492 148 NPVNLPWGDLGIDLVIEGTGVF-VDREGAGKHIQAGAKKVLITAPG 192 (442)
Q Consensus 148 ~p~~l~W~~~gvDiVie~TG~f-~~~e~a~~hl~aGAkkVIIsaps 192 (442)
.+..+. ++|+||=|||.- ...+-+....+.|..--+++.|.
T Consensus 66 ~~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 66 DETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp CGGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred CccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 233332 789999999975 34444444445666422355543
No 406
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=46.09 E-value=20 Score=32.92 Aligned_cols=30 Identities=30% Similarity=0.537 Sum_probs=25.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|||-|-| .|.||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLD 31 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 3789999 8999999999998864 6887764
No 407
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=45.35 E-value=72 Score=32.05 Aligned_cols=85 Identities=24% Similarity=0.250 Sum_probs=49.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecCCCh---hhhhhhcccCcccccCCcceeeecCCcEEECCEEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGV---KQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVS 145 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~~~~---~~la~LlkyDSt~g~f~~~v~~~~~~~i~v~Gk~I~v~~ 145 (442)
.||.|.|.|..|...++.|..+. .+|.+ .|.... .....| +..++ ++..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G---~~V~~-~D~~~~~~~~~~~~L-----------------~~~gi-------~~~~ 61 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG---AIVTV-NDGKPFDENPTAQSL-----------------LEEGI-------KVVC 61 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT---CEEEE-EESSCGGGCHHHHHH-----------------HHTTC-------EEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEE-EeCCcccCChHHHHH-----------------HhCCC-------EEEE
Confidence 48999999999999999998875 57544 453211 111111 11122 2222
Q ss_pred cCCCCCCCCCCcc-ccEEEcCCCCCCCHhhHHHHHHcCCC
Q 013492 146 NRNPVNLPWGDLG-IDLVIEGTGVFVDREGAGKHIQAGAK 184 (442)
Q Consensus 146 ~~~p~~l~W~~~g-vDiVie~TG~f~~~e~a~~hl~aGAk 184 (442)
..+|.++. .+ +|+||=+.|.-.+.+......+.|.+
T Consensus 62 g~~~~~~~---~~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 62 GSHPLELL---DEDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp SCCCGGGG---GSCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred CCChHHhh---cCCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 33343321 13 89999999986665555555556653
No 408
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=45.33 E-value=23 Score=34.00 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=27.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+++||.|.|-|..|+.+++++.... ++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G---~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLG---VEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEEC
Confidence 4569999999999999999998764 68888864
No 409
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=45.09 E-value=17 Score=33.86 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=25.7
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+.||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 46899999 8999999999999874 67777753
No 410
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=45.04 E-value=17 Score=36.39 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=24.7
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|- |.||...+..+.... .+++++..
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~G---a~vi~~~~ 261 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGG---ANPICVVS 261 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CeEEEEEC
Confidence 37999995 999999998887764 57777754
No 411
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=44.83 E-value=21 Score=33.54 Aligned_cols=29 Identities=21% Similarity=0.240 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEE
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAI 100 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaI 100 (442)
|||+|+|-|..|-.++..|..+. ++|+-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G---~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG---IKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CCEEEE
Confidence 69999999999999988887764 676555
No 412
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=44.81 E-value=23 Score=33.23 Aligned_cols=31 Identities=29% Similarity=0.361 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD---QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998874 58877754
No 413
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=44.55 E-value=16 Score=37.73 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||||+|.|.+|..++..+.... ++|+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG---~~V~l~D 35 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG---HQVLLYD 35 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEE
Confidence 38999999999999999988764 6776554
No 414
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=44.23 E-value=9.7 Score=37.18 Aligned_cols=31 Identities=23% Similarity=0.180 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|+|.|.||...++.+.... -.+|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~ 227 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLG--AENVIVIA 227 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--BSEEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcC--CceEEEEc
Confidence 37999999999999998887653 13777775
No 415
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=44.19 E-value=18 Score=34.21 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=24.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|+| .|.||...+..+.... .+|+++.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~ 184 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG---TTVITTA 184 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC---CEEEEEe
Confidence 4799998 9999999998887764 5787775
No 416
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=44.08 E-value=22 Score=32.56 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=27.5
Q ss_pred CceeEEEEcCCh---------hHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGR---------IGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGr---------IGr~~lr~l~~~~~~~~evvaInd 102 (442)
|++||+|.|-|. -|+.+++++..+. ++++.++-
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G---~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG---IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT---CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC---CeEEEEec
Confidence 678999999887 7899999998874 78877763
No 417
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=44.02 E-value=24 Score=34.72 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=28.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++.||.|.|-|.+|+.+++++..+. ++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G---~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLG---VEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4569999999999999999998764 78888875
No 418
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=43.98 E-value=24 Score=32.80 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=26.5
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+++|-|-| .|-||+.+++.|.++. .+|+++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEec
Confidence 35899999 9999999999999874 67777643
No 419
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=43.96 E-value=17 Score=35.57 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=20.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
|||+|.|.|.||..++..+..++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~ 23 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQD 23 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999998887653
No 420
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=43.93 E-value=16 Score=35.05 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=24.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
..+|+|+|+|.+|+.+++.+.... .++-|.|-|.
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~--g~~~V~v~dr 168 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQF--SFKEVRIWNR 168 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC--CCSEEEEECS
T ss_pred CcEEEEECCcHHHHHHHHHHHHhC--CCcEEEEEcC
Confidence 358999999999999999887641 2533445443
No 421
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=43.42 E-value=17 Score=32.78 Aligned_cols=24 Identities=13% Similarity=0.401 Sum_probs=21.3
Q ss_pred ceeEEEEc-CChhHHHHHHHHHhCC
Q 013492 68 KLKVAING-FGRIGRNFLRCWHGRK 91 (442)
Q Consensus 68 ~ikVaInG-fGrIGr~~lr~l~~~~ 91 (442)
++||.|-| .|.||+.+++.|.++.
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcC
Confidence 46899999 9999999999998764
No 422
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=43.37 E-value=18 Score=35.08 Aligned_cols=30 Identities=10% Similarity=-0.055 Sum_probs=24.4
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|+|- |.||...+.++.... .+|+++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 37999995 999999998887764 5787775
No 423
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=43.14 E-value=13 Score=35.46 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|.|.|+|++|+.+++.|.+++ . ++.|.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g---~-v~vid 144 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSE---V-FVLAE 144 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSC---E-EEEES
T ss_pred CCEEEECCcHHHHHHHHHHHhCC---c-EEEEe
Confidence 47999999999999999988763 5 76664
No 424
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=43.13 E-value=11 Score=35.97 Aligned_cols=31 Identities=19% Similarity=0.286 Sum_probs=24.1
Q ss_pred eeEEEEcCC-hhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFG-RIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfG-rIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|-| .||...++.+.... .+|+++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN---FRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC---CEEEEEeC
Confidence 379999965 99999998887653 58877754
No 425
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=43.12 E-value=22 Score=36.11 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=26.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|..+. .+|+++.-
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG---HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6899999 9999999999998874 68887764
No 426
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=42.76 E-value=24 Score=33.05 Aligned_cols=31 Identities=35% Similarity=0.474 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++|.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG---DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 9999999999998874 68877753
No 427
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=42.65 E-value=22 Score=34.46 Aligned_cols=24 Identities=33% Similarity=0.297 Sum_probs=20.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
++||+|.|.|.||..++-.+..+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~ 30 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQ 30 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 479999999999999998887663
No 428
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=42.18 E-value=12 Score=35.81 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=24.8
Q ss_pred eeEEEE-cCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAIN-GFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaIn-GfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|+ |.|.||...++.+.... .+|+++..
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~ 183 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG---LRVITTAS 183 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 379999 59999999998887664 58887754
No 429
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=41.80 E-value=29 Score=30.55 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=25.0
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+|-|-| .|-||+.+++.|.++. .+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG---HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 689999 8999999999998874 57777653
No 430
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=41.78 E-value=20 Score=34.07 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|.|.|.+|..++..|....- .-+|+.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEc
Confidence 589999999999999998876531 13665554
No 431
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=41.70 E-value=25 Score=33.69 Aligned_cols=29 Identities=28% Similarity=0.317 Sum_probs=23.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--EEEEE
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL--EVVAI 100 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~--evvaI 100 (442)
+||+|.|.|.+|..++..+.... + +|+.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g---~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG---SCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCEEEEE
Confidence 48999999999999998887653 4 65544
No 432
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=41.51 E-value=26 Score=32.56 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|||-|-| .|.||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3789999 9999999999998874 6887774
No 433
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=41.43 E-value=31 Score=32.39 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=24.3
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+|.|.|- |.||...+..+.... .+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeC
Confidence 4999995 999999998887764 58887764
No 434
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=41.28 E-value=18 Score=34.19 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=24.0
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 70 KVAINGF-GRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 70 kVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+|.|.|- |.||...++.+.... .+|+++...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~ 184 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTGN 184 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 6999995 999999988877653 467776643
No 435
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=41.05 E-value=24 Score=35.95 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.||+|+|.|.+|..++..+.... ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG---ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEE
Confidence 48999999999999999888653 6876664
No 436
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=40.98 E-value=24 Score=34.45 Aligned_cols=33 Identities=30% Similarity=0.310 Sum_probs=24.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
++||+|.|.|.+|..++..+.... .++ |.+-|.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g--~~~-V~L~D~ 41 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRE--LAD-VVLYDV 41 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCe-EEEEEC
Confidence 469999999999999998887653 136 445553
No 437
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=40.96 E-value=22 Score=33.13 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++|.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 4899999 9999999999998762 1268877754
No 438
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=40.89 E-value=20 Score=38.14 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhC---CCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGR---KDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~---~~~~~evvaInd 102 (442)
.||||+|+|.+|+.+++.|... ....++|+.-++
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 4899999999999999998765 001267654443
No 439
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=40.89 E-value=22 Score=34.38 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=20.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHhC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGR 90 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~ 90 (442)
++||+|.|.|.||..++..+..+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~ 28 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ 28 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 47999999999999999877765
No 440
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=40.82 E-value=28 Score=33.51 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||+|.|-|..||.+++++.... ++++++..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G---~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG---FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 38999999999999999988764 78888764
No 441
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=40.02 E-value=31 Score=31.69 Aligned_cols=31 Identities=13% Similarity=0.121 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG---YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998874 68877754
No 442
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=39.93 E-value=30 Score=31.75 Aligned_cols=31 Identities=19% Similarity=0.402 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN---VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 5799999 9999999999998874 68877754
No 443
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=39.63 E-value=28 Score=34.05 Aligned_cols=31 Identities=26% Similarity=0.181 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|.|.+|+.+++.+.... .+|++++-
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG---AQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 58999999999999999998764 47776664
No 444
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=39.17 E-value=27 Score=36.33 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaInd 102 (442)
+||+|.|.|.+|..++.++...+ .. +|++++-
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~--G~~~V~~~D~ 51 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAP--CFEKVLGFQR 51 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHST--TCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHhC--CCCeEEEEEC
Confidence 59999999999999999988761 26 8877753
No 445
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=39.14 E-value=25 Score=34.64 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
-||||+|.|.+|+.++..+.... ++|+ +-|.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G---~~V~-l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVK-LYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEE-EECS
T ss_pred CeEEEECCcHHHHHHHHHHHhCC---CeEE-EEEC
Confidence 48999999999999998877664 6754 4454
No 446
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=39.06 E-value=24 Score=34.04 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhC-CCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGR-KDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~-~~~~~evvaIn 101 (442)
-+|.|+|.|.||...+..+... . .+|+++.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~~G---a~Vi~~~ 218 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVMTP---ATVIALD 218 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCC---CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC---CeEEEEe
Confidence 3799999999999988877655 3 5777775
No 447
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=39.05 E-value=31 Score=32.34 Aligned_cols=31 Identities=16% Similarity=0.039 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++|.|-| .|.||+.+++.|..+. .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CeEEEEeC
Confidence 5899999 9999999999998864 58877754
No 448
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=38.70 E-value=31 Score=31.81 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG---YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 8999999999998874 68877754
No 449
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=38.60 E-value=30 Score=32.96 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|.|-| .|.||+.+++.|..+. .+|+++.
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~ 42 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKN---YEVCIVD 42 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEE
Confidence 6899999 9999999999998874 6888774
No 450
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=38.22 E-value=29 Score=32.43 Aligned_cols=31 Identities=26% Similarity=0.685 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG---HEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999998764 68877754
No 451
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=37.80 E-value=11 Score=36.32 Aligned_cols=31 Identities=26% Similarity=0.210 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|+| .|.||...++.+.... .+|+++..
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~~ 200 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFG---AEVYATAG 200 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 3799995 9999999999888764 57877753
No 452
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=37.79 E-value=28 Score=33.30 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.||+|.|-|..|+.+++++.... ++++++..
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~G---~~v~~~~~ 32 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKLG---FKFHVLED 32 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 38999999999999999998764 88888864
No 453
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=37.70 E-value=34 Score=32.70 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=27.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|| ||+|.|-|.-|+.+++++.+.. +++++++.
T Consensus 1 MK-~I~ilGgg~~g~~~~~~Ak~~G---~~vv~vd~ 32 (363)
T 4ffl_A 1 MK-TICLVGGKLQGFEAAYLSKKAG---MKVVLVDK 32 (363)
T ss_dssp CC-EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CC-EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 44 8999999999999999887764 89999964
No 454
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=37.67 E-value=28 Score=36.53 Aligned_cols=31 Identities=13% Similarity=0.362 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
.+|.|.|+|.||+.+++.+.... ..|+. .|.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G---A~Viv-~D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG---ARVIV-TEI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEE-ECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEE-EcC
Confidence 47999999999999999998874 57654 454
No 455
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=37.58 E-value=30 Score=33.50 Aligned_cols=34 Identities=15% Similarity=0.020 Sum_probs=26.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
..+|+|.|.|.+|+..++++.... +++.|.|-|.
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r 158 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDV 158 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECS
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECC
Confidence 358999999999999999987632 2555666664
No 456
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=37.47 E-value=29 Score=33.56 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=20.5
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHhCC
Q 013492 68 KLKVAINGF-GRIGRNFLRCWHGRK 91 (442)
Q Consensus 68 ~ikVaInGf-GrIGr~~lr~l~~~~ 91 (442)
++||+|.|- |.||..++..+..+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~ 29 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGD 29 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 479999995 999999998887653
No 457
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=37.45 E-value=8.8 Score=36.90 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=24.1
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|+|- |.||...+..+.... ...|+++..
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g--~~~V~~~~~ 176 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVP--NVTVFGTAS 176 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTST--TCEEEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC--CcEEEEeCC
Confidence 37999995 999999888765542 367877763
No 458
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=37.01 E-value=19 Score=32.59 Aligned_cols=32 Identities=19% Similarity=0.396 Sum_probs=25.4
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
||.|-| .|.||+.+++.|..+. +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKV-PASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEEc
Confidence 689999 8999999999998761 1268877754
No 459
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=36.92 E-value=31 Score=31.89 Aligned_cols=33 Identities=33% Similarity=0.650 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g-~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH-PDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhC-CCCEEEEEec
Confidence 5799999 9999999999998763 1368887753
No 460
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=36.88 E-value=28 Score=32.59 Aligned_cols=32 Identities=31% Similarity=0.415 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|||.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~--g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT--QDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC--SCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcC--CCeEEEEec
Confidence 3799999 8999999999998752 268877753
No 461
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=36.73 E-value=24 Score=33.74 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=25.1
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|- |.||...++.+.... .+|+++..
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~G---a~Vi~~~~ 192 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMG---AKVIAVVN 192 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 37999995 999999999887764 58877764
No 462
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=36.72 E-value=29 Score=34.15 Aligned_cols=31 Identities=29% Similarity=0.317 Sum_probs=23.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEE
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaI 100 (442)
.+||+|.|.|.||..++.++..++- + +|+.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~--~~~l~l~ 36 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGI--TDELVVI 36 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CceEEEE
Confidence 3699999999999999998876531 2 65544
No 463
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=36.70 E-value=29 Score=33.14 Aligned_cols=30 Identities=3% Similarity=0.080 Sum_probs=22.8
Q ss_pred eEEEE-cCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAIN-GFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaIn-GfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
+|-|. |.|.||...++++.... .+|+++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G---a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG---FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 56666 69999999998887653 58877753
No 464
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=36.44 E-value=32 Score=30.24 Aligned_cols=32 Identities=28% Similarity=0.295 Sum_probs=25.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCc-EEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~-evvaInd 102 (442)
.+|.|-| .|.||+.+++.|.++. .+ +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG--LFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEc
Confidence 4799999 9999999999998864 22 7777653
No 465
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=36.37 E-value=31 Score=32.83 Aligned_cols=30 Identities=10% Similarity=-0.055 Sum_probs=24.3
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|.|- |.||+.+++.+.... .+|+++.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~ 198 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG---ARVIATA 198 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEe
Confidence 47999995 999999999887764 5777765
No 466
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=36.08 E-value=38 Score=31.98 Aligned_cols=31 Identities=26% Similarity=0.441 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHh--CCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHG--RKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~--~~~~~~evvaInd 102 (442)
++|-|-| .|-||+.+++.|.. +. .+|+++..
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r 44 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDK 44 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEEC
Confidence 5899999 99999999999988 53 68888764
No 467
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=35.35 E-value=33 Score=35.47 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|+|+|.|-||--++-++.+.. ++|+++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G---~~V~g~D 51 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLG---HRVVGYD 51 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC---CcEEEEE
Confidence 48999999999988888887664 7998873
No 468
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=35.30 E-value=38 Score=32.16 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHH-hCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWH-GRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~-~~~~~~~evvaInd 102 (442)
|+|-|-| .|.||+.+++.|. .+. .+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEec
Confidence 4899999 9999999999998 764 68877754
No 469
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=35.12 E-value=23 Score=34.57 Aligned_cols=30 Identities=10% Similarity=0.154 Sum_probs=23.6
Q ss_pred eeEEEE--cCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAIN--GFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaIn--GfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|. |.|.||...+..+.... .+|+++.
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~ 203 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDG---IKLVNIV 203 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHT---CCEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 368998 79999999888877653 5787775
No 470
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=34.92 E-value=38 Score=33.08 Aligned_cols=29 Identities=28% Similarity=0.326 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEE
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaI 100 (442)
.||+|.|.|.+|..++..+..+. + +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g---~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE---LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 48999999999999998887763 5 65544
No 471
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=34.79 E-value=11 Score=32.91 Aligned_cols=26 Identities=27% Similarity=0.604 Sum_probs=24.0
Q ss_pred HHHHHHHHHhcccccCCCceeeccCC
Q 013492 361 AEEVNAAFRESADNELKGILSVCDEP 386 (442)
Q Consensus 361 ~eeV~~a~~~aa~~~lkgil~~~~~~ 386 (442)
.+||.+.+++..+...+|++-||||.
T Consensus 72 p~eVdkm~~k~~q~~~dGl~iYCDde 97 (126)
T 2rbg_A 72 KNEVDIFLKNLEKSEVDGLLVYCDDE 97 (126)
T ss_dssp GGGHHHHHHHHTTCCCCEEEEEECGG
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCCC
Confidence 48999999999999999999999986
No 472
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=34.70 E-value=46 Score=30.83 Aligned_cols=33 Identities=24% Similarity=0.469 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC-CCCC---cEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGR-KDSP---LEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~-~~~~---~evvaInd 102 (442)
|||.|-| .|.||+.+++.|.++ . .. .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~-~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAY-PDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSC-TTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhc-CCCCceEEEEEEC
Confidence 3799999 999999999999874 2 12 58877754
No 473
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=34.64 E-value=39 Score=30.91 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=24.7
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 70 kVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
||.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENG---YSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCC---CEEEEEE
Confidence 789999 9999999999998874 5887654
No 474
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=34.54 E-value=38 Score=32.93 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEecC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT 103 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd~ 103 (442)
+||+|.|.|.+|..++..+..+. -++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g--~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKN--LGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCe-EEEEeC
Confidence 59999999999999998888764 237 555564
No 475
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=34.54 E-value=40 Score=32.96 Aligned_cols=29 Identities=28% Similarity=0.393 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEE
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaI 100 (442)
+||+|.|.|.+|..++..+..+. + +|+-+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~---~~~v~l~ 35 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQ---LGDVVLF 35 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CceEEEE
Confidence 69999999999999998887764 3 65544
No 476
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=34.27 E-value=33 Score=33.33 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=19.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHhC
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGR 90 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~ 90 (442)
++||+|.|.|.||..++-.+..+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~ 27 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQ 27 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHcC
Confidence 47999999999999998877665
No 477
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=34.17 E-value=45 Score=33.08 Aligned_cols=31 Identities=23% Similarity=0.110 Sum_probs=24.5
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|- |.||...++.+.... .+++++..
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~~ 253 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG---GIPVAVVS 253 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 47999995 999999998887764 57776653
No 478
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=34.17 E-value=39 Score=31.70 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 9999999999998874 68877753
No 479
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=34.10 E-value=41 Score=30.05 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=26.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
|+.+|.|+|-|..|-..+..|..+. ++|+-|..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR---KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC---CCEEEEeC
Confidence 5679999999999999998887764 56666653
No 480
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=33.65 E-value=33 Score=33.90 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=27.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
..||+|.|-|..||.+++++.... ++++++.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG---~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLN---IQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 468999999999999999998764 8888887
No 481
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=33.53 E-value=33 Score=30.59 Aligned_cols=29 Identities=24% Similarity=0.479 Sum_probs=23.7
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
||.|-| .|.||+.+++.|.+ . .+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r 31 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-R---HEVIKVYN 31 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-T---SCEEEEES
T ss_pred EEEEECCCChhHHHHHHHHhc-C---CeEEEecC
Confidence 799999 99999999999974 2 57776653
No 482
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=33.29 E-value=40 Score=30.55 Aligned_cols=31 Identities=16% Similarity=0.494 Sum_probs=24.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
||.|-| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG--ITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT--CCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC--CcEEEEEcc
Confidence 578999 8999999999998863 257777764
No 483
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=33.26 E-value=36 Score=31.30 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=24.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
|+.+|.|+|-|.+|-.++..|..+. ++|+-+-
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G---~~V~vlE 32 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFD 32 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHHCC---CcEEEEE
Confidence 4468999999999999998888764 5665553
No 484
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=33.20 E-value=41 Score=32.14 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaInd 102 (442)
.+|.|.|.|.+||.+++.|.... . +|+.+|-
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G---~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA---AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 48999999999999999998764 4 6666664
No 485
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=33.07 E-value=32 Score=33.96 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=25.9
Q ss_pred cccCceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 64 AAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 64 ~~~~~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
..+|+.+|.|+|-|..|-..+..|..+. ++|+-|-.
T Consensus 18 ~~~m~~~ViIVGaGpaGl~~A~~La~~G---~~V~viE~ 53 (430)
T 3ihm_A 18 GSHMKKRIGIVGAGTAGLHLGLFLRQHD---VDVTVYTD 53 (430)
T ss_dssp -----CEEEEECCHHHHHHHHHHHHHTT---CEEEEEES
T ss_pred cCcCCCCEEEECCcHHHHHHHHHHHHCC---CeEEEEcC
Confidence 3457779999999999999998888764 67766654
No 486
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=33.07 E-value=21 Score=33.35 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=24.7
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGF-GRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGf-GrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.|. |.||+..++.+.... .+|+++..
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~G---a~Vi~~~~ 158 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMG---LRVLAAAS 158 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 37999995 999999999887764 57777654
No 487
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=33.06 E-value=36 Score=33.24 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC
Q 013492 69 LKVAING-FGRIGRNFLRCWHGR 90 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~ 90 (442)
+||+|.| .|.||..++..+..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 4899999 999999999888764
No 488
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=32.72 E-value=30 Score=33.31 Aligned_cols=30 Identities=10% Similarity=0.004 Sum_probs=24.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
-+|.|.| .|.||+.+++.+.... .+|+++.
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~G---a~Vi~~~ 194 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAG---AIPLVTA 194 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcC---CEEEEEe
Confidence 3799999 8999999999888764 5777765
No 489
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=32.65 E-value=33 Score=33.15 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=19.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
|||+|.|.|.+|..++..+..+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~ 23 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNL 23 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 48999999999999998877653
No 490
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=32.58 E-value=36 Score=33.19 Aligned_cols=24 Identities=21% Similarity=0.283 Sum_probs=20.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHhC
Q 013492 67 AKLKVAINGFGRIGRNFLRCWHGR 90 (442)
Q Consensus 67 ~~ikVaInGfGrIGr~~lr~l~~~ 90 (442)
+++||+|.|.|.||..++-.+..+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~ 31 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQ 31 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcC
Confidence 347999999999999998877654
No 491
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=32.53 E-value=39 Score=34.60 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=27.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 68 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 68 ~ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
.+||||.|.|.+|.-++.++.... .+|++++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G---~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG---HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 479999999999999999998764 68887764
No 492
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=32.35 E-value=28 Score=32.92 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=24.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|.|.| .|.||+.+++.+.... .+|+++..
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~ 178 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLG---ATVIGTVS 178 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 3799999 7999999999888764 57777653
No 493
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=30.86 E-value=37 Score=33.45 Aligned_cols=23 Identities=22% Similarity=0.275 Sum_probs=20.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRK 91 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~ 91 (442)
.||+|.|.|.||..++..+..++
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~ 32 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQG 32 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999998887653
No 494
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=30.68 E-value=1.4e+02 Score=30.48 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=25.2
Q ss_pred eeEEEEcCC----hhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFG----RIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfG----rIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-+|+|+|.+ ++|+.+++.+.+.. .-+|..||-
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g--~~~v~pVnP 44 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNI 44 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECS
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcC--CCEEEEECC
Confidence 479999965 89999999987652 368888884
No 495
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=30.30 E-value=36 Score=32.59 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=24.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 70 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 70 kVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
||.|.|-|.+||.+++++.+.. ++++++..
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G---~~v~~~~~ 30 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLG---LSFRFLDP 30 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBT---CCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 6899999999999999986553 68887764
No 496
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=30.03 E-value=47 Score=33.19 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEec
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIND 102 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaInd 102 (442)
-||+|.|-|.+||.+++++.... +++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG---~~v~v~d~ 66 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMG---YRVAVLDP 66 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 48999999999999999998764 88888753
No 497
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=29.62 E-value=50 Score=32.38 Aligned_cols=29 Identities=31% Similarity=0.371 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-EEEEE
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPL-EVVAI 100 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~-evvaI 100 (442)
+||+|.|.|.+|..++..+.... + +|+-+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~---~~~v~L~ 37 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKE---LGDVVLF 37 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 59999999999999998887764 4 65444
No 498
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=29.61 E-value=43 Score=31.23 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCC--CCcEEEEEec
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKD--SPLEVVAIND 102 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~--~~~evvaInd 102 (442)
+||.|-| .|.||+.+++.|.++.. +..+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 4899999 99999999999887530 0168887764
No 499
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=29.37 E-value=57 Score=31.19 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInGfGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
+||+|.|.|.+|..++..+..... ..+|+.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~-g~~V~l~D 32 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQL-ARELVLLD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEe
Confidence 489999999999999988876421 24665553
No 500
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=29.13 E-value=48 Score=28.99 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=24.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCcEEEEEe
Q 013492 69 LKVAING-FGRIGRNFLRCWHGRKDSPLEVVAIN 101 (442)
Q Consensus 69 ikVaInG-fGrIGr~~lr~l~~~~~~~~evvaIn 101 (442)
.+|-|-| .|-||+.+++.|.++. .+|+++.
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G---~~V~~~~ 33 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG---YRVVVLD 33 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC---CEEEEEc
Confidence 4688999 9999999999998764 5776654
Done!