Query 013493
Match_columns 442
No_of_seqs 149 out of 185
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 11:37:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013493.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013493hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 7.2E-27 2.4E-31 241.6 23.4 237 4-271 24-340 (448)
2 3eqn_A Glucan 1,3-beta-glucosi 99.9 8E-27 2.7E-31 252.9 21.6 188 7-252 49-247 (758)
3 1rmg_A Rgase A, rhamnogalactur 99.9 2E-24 6.8E-29 221.4 24.1 228 5-273 18-265 (422)
4 2uvf_A Exopolygalacturonase; G 99.9 5E-22 1.7E-26 211.8 26.0 284 4-322 153-532 (608)
5 2pyg_A Poly(beta-D-mannuronate 99.9 7.3E-21 2.5E-25 188.0 25.1 162 7-191 2-191 (377)
6 1bhe_A PEHA, polygalacturonase 99.9 3.8E-21 1.3E-25 193.4 20.9 239 7-283 14-303 (376)
7 1h80_A IOTA-carrageenase; hydr 99.9 6E-20 2E-24 191.1 23.8 214 5-260 19-252 (464)
8 3gqn_A Preneck appendage prote 99.8 1.5E-19 5.2E-24 196.4 24.4 310 4-345 19-393 (772)
9 3gq8_A Preneck appendage prote 99.8 2.3E-19 7.8E-24 191.6 25.4 322 4-354 19-407 (609)
10 2x6w_A Tail spike protein; vir 99.8 5.9E-19 2E-23 188.0 16.6 195 5-247 49-287 (600)
11 2vbk_A Tailspike-protein; vira 99.8 7.4E-18 2.5E-22 174.2 21.2 261 5-298 49-380 (514)
12 1hg8_A Endopolygalacturonase; 99.7 7.1E-16 2.4E-20 154.4 21.3 223 23-284 7-267 (349)
13 2iq7_A Endopolygalacturonase; 99.7 1.9E-15 6.4E-20 150.6 23.2 283 23-350 7-320 (339)
14 1czf_A Polygalacturonase II; b 99.7 3E-15 1E-19 150.9 23.3 283 24-350 35-345 (362)
15 1nhc_A Polygalacturonase I; be 99.7 8.6E-15 2.9E-19 145.7 24.1 282 22-349 6-318 (336)
16 1k5c_A Endopolygalacturonase; 99.6 7.2E-15 2.5E-19 146.7 20.2 277 24-348 8-313 (335)
17 1ia5_A Polygalacturonase; glyc 99.6 5.9E-15 2E-19 147.2 19.3 221 22-283 10-258 (339)
18 1x0c_A Isopullulanase; glycosi 99.5 5.4E-15 1.9E-19 156.6 5.4 216 7-249 142-401 (549)
19 1ogo_X Dextranase; hydrolase, 99.5 3.5E-13 1.2E-17 143.6 17.9 179 49-249 228-439 (574)
20 2inu_A Insulin fructotransfera 99.0 3.2E-09 1.1E-13 109.2 14.1 65 1-71 8-76 (410)
21 3eqn_A Glucan 1,3-beta-glucosi 98.8 3.1E-09 1E-13 116.1 4.7 68 4-88 397-466 (758)
22 1ru4_A Pectate lyase, PEL9A; p 97.5 0.0028 9.5E-08 64.8 17.0 95 151-248 131-230 (400)
23 2pyg_A Poly(beta-D-mannuronate 97.1 0.0081 2.8E-07 59.0 14.2 180 148-352 171-360 (377)
24 1dbg_A Chondroitinase B; beta 96.7 0.041 1.4E-06 58.0 16.8 93 157-261 157-272 (506)
25 1hg8_A Endopolygalacturonase; 96.3 0.3 1E-05 48.7 19.4 103 132-249 134-263 (349)
26 1czf_A Polygalacturonase II; b 95.9 0.078 2.7E-06 53.3 13.1 102 133-249 156-276 (362)
27 1pxz_A Major pollen allergen J 95.8 0.077 2.6E-06 53.3 12.6 45 148-193 149-195 (346)
28 1gq8_A Pectinesterase; hydrola 95.8 0.49 1.7E-05 47.1 17.8 128 25-191 20-153 (319)
29 1k5c_A Endopolygalacturonase; 95.6 0.073 2.5E-06 52.9 11.4 103 131-249 125-247 (335)
30 1ogo_X Dextranase; hydrolase, 95.6 0.64 2.2E-05 49.8 19.1 148 52-224 264-435 (574)
31 1bhe_A PEHA, polygalacturonase 95.6 0.072 2.5E-06 53.3 11.2 102 132-248 181-299 (376)
32 1xg2_A Pectinesterase 1; prote 95.5 0.6 2.1E-05 46.3 17.2 128 25-191 16-149 (317)
33 2iq7_A Endopolygalacturonase; 95.4 0.12 4E-06 51.3 11.8 103 132-249 130-251 (339)
34 1ia5_A Polygalacturonase; glyc 95.3 0.12 4.2E-06 51.2 11.7 103 132-249 134-255 (339)
35 3jur_A EXO-poly-alpha-D-galact 95.2 0.15 5E-06 52.9 12.4 106 132-249 220-347 (448)
36 1rmg_A Rgase A, rhamnogalactur 94.6 0.34 1.2E-05 49.5 12.9 109 154-277 132-246 (422)
37 2uvf_A Exopolygalacturonase; G 94.3 0.36 1.2E-05 51.6 12.8 116 132-261 361-499 (608)
38 1x0c_A Isopullulanase; glycosi 93.9 0.17 5.9E-06 53.7 9.3 152 51-225 221-398 (549)
39 3gq8_A Preneck appendage prote 93.2 0.27 9.4E-06 53.1 9.4 95 146-261 144-254 (609)
40 1ru4_A Pectate lyase, PEL9A; p 92.5 0.48 1.7E-05 48.3 9.7 99 158-274 115-227 (400)
41 1nhc_A Polygalacturonase I; be 92.2 4 0.00014 40.2 15.7 81 162-247 113-195 (336)
42 3gqn_A Preneck appendage prote 91.5 0.56 1.9E-05 51.9 9.3 95 146-261 144-254 (772)
43 2x3h_A K5 lyase, K5A lyase; ba 90.7 2.5 8.4E-05 42.9 12.3 76 5-104 62-138 (542)
44 1h80_A IOTA-carrageenase; hydr 87.9 3.7 0.00013 42.8 11.8 83 150-247 168-265 (464)
45 1idk_A Pectin lyase A; signal, 87.3 15 0.00051 37.0 15.4 47 149-195 153-201 (359)
46 1pxz_A Major pollen allergen J 86.6 4.8 0.00016 40.3 11.4 132 229-366 106-266 (346)
47 3uw0_A Pectinesterase; right-h 86.0 6.6 0.00022 39.7 12.1 35 156-191 164-198 (364)
48 2nsp_A Pectinesterase A; micha 85.2 16 0.00055 36.4 14.3 35 155-191 137-171 (342)
49 1qcx_A Pectin lyase B; beta-he 84.6 29 0.001 34.8 16.0 46 149-195 153-201 (359)
50 3zsc_A Pectate trisaccharide-l 84.1 2 6.7E-05 43.3 7.2 48 148-196 115-164 (340)
51 1pcl_A Pectate lyase E; lyase 79.6 16 0.00054 36.7 11.9 111 230-344 97-247 (355)
52 2qy1_A Pectate lyase II; GAG l 78.1 13 0.00045 36.8 10.7 133 230-366 87-244 (330)
53 1pcl_A Pectate lyase E; lyase 77.7 3.9 0.00013 41.1 6.8 47 148-194 132-196 (355)
54 1qcx_A Pectin lyase B; beta-he 77.6 10 0.00035 38.2 9.8 129 230-366 125-274 (359)
55 3ju4_A Endo-N-acetylneuraminid 74.8 1 3.6E-05 47.3 1.7 24 12-35 3-26 (670)
56 1air_A Pectate lyase C, PELC; 74.4 22 0.00074 35.7 11.2 131 230-366 104-255 (353)
57 1idk_A Pectin lyase A; signal, 73.6 17 0.00058 36.6 10.2 129 230-366 125-274 (359)
58 1pe9_A Pectate lyase A; parall 73.4 6.5 0.00022 39.7 7.1 48 148-195 142-208 (361)
59 3vmv_A Pectate lyase; polysacc 73.2 22 0.00074 35.5 10.7 130 230-366 96-244 (326)
60 1vbl_A Pectate lyase 47; PL 47 72.0 5.7 0.00019 40.9 6.4 48 148-195 188-253 (416)
61 2o04_A Pectate lyase, PL; hexa 67.1 8.7 0.0003 39.3 6.5 48 148-195 182-247 (399)
62 1vbl_A Pectate lyase 47; PL 47 63.7 40 0.0014 34.6 10.7 132 230-366 149-328 (416)
63 3vmv_A Pectate lyase; polysacc 63.6 1E+02 0.0036 30.5 13.3 34 286-322 215-249 (326)
64 1dbg_A Chondroitinase B; beta 63.4 55 0.0019 34.4 11.8 110 209-331 267-400 (506)
65 2o04_A Pectate lyase, PL; hexa 53.2 62 0.0021 33.0 9.9 112 230-345 144-297 (399)
66 2inu_A Insulin fructotransfera 51.9 55 0.0019 33.8 9.3 100 149-261 206-323 (410)
67 3zsc_A Pectate trisaccharide-l 39.0 3.1E+02 0.01 27.4 15.3 126 171-334 115-267 (340)
68 2qy1_A Pectate lyase II; GAG l 37.6 3E+02 0.01 26.9 15.5 57 138-194 99-175 (330)
69 1air_A Pectate lyase C, PELC; 31.2 4E+02 0.014 26.5 13.4 58 138-195 115-190 (353)
70 3riq_A Tailspike protein; righ 30.5 37 0.0013 35.6 4.0 57 217-277 310-370 (543)
71 3grh_A YBHC, acyl-COA thioeste 27.8 83 0.0028 32.6 6.1 43 25-79 90-132 (422)
72 3n6z_A Putative immunoglobulin 23.1 53 0.0018 33.2 3.5 68 203-277 96-176 (363)
73 1pe9_A Pectate lyase A; parall 20.1 6.6E+02 0.022 25.1 15.4 22 171-192 142-164 (361)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.95 E-value=7.2e-27 Score=241.62 Aligned_cols=237 Identities=15% Similarity=0.139 Sum_probs=161.6
Q ss_pred CCeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceE-Eecc
Q 013493 4 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGG 82 (442)
Q Consensus 4 ~~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~-i~~G 82 (442)
.+++|||++|||++||++|+|+|||+||+ ||+.. ||++|++|+|+|++ +||.|++. +. ..+|
T Consensus 24 ~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~-~c~~~------------ggg~v~vP~G~yl~-~~l~l~s~---v~l~l~g 86 (448)
T 3jur_A 24 PDREVNLLDFGARGDGRTDCSESFKRAIE-ELSKQ------------GGGRLIVPEGVFLT-GPIHLKSN---IELHVKG 86 (448)
T ss_dssp CSCEEEGGGGTCCCEEEEECHHHHHHHHH-HHHHH------------TCEEEEECSSEEEE-SCEECCTT---EEEEESS
T ss_pred CCcEEEEEecccCCCCCeecHHHHHHHHH-hhhhc------------CCeEEEECCCcEEE-eeeEeCCC---cEEEEEE
Confidence 35699999999999999999999999997 55421 46789999999987 89999753 44 4779
Q ss_pred eEEeCCCC----CC------------CcceEEEecCCCcccccceeeeccc--ceeeecccCcccC--------------
Q 013493 83 TLRASDTF----PS------------DRHLIELWAPNSQKLKRTDAIKIDR--NYVFNDVKDQTAR-------------- 130 (442)
Q Consensus 83 TLkAp~df----~~------------d~~wI~f~~~n~l~v~G~GtfDgqG--~~~W~~~~c~~~~-------------- 130 (442)
||+||+++ |. ...||.+...+.+.++|+|++||+| ..||.|..++...
T Consensus 87 tL~~s~d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~ 166 (448)
T 3jur_A 87 TIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKK 166 (448)
T ss_dssp EEEECCCGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHH
T ss_pred EEEecCCHHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhh
Confidence 99999753 21 0238999999999999999999999 8899865432100
Q ss_pred -----------------ccceeeeeeeEEE--ecceEecceeEecccc--EEEeeeEEeee----------ccccEEEee
Q 013493 131 -----------------TYYEDITFRDVLF--DSGFRGGGIFVIDSAR--IRINNCFFLHF----------TTQGILVQR 179 (442)
Q Consensus 131 -----------------~~c~~iT~rnl~~--D~n~~~~GIt~~NSq~--~~I~Nc~~~~f----------NTDGIhI~~ 179 (442)
..+.. -++-|.| ..++.+.||+++||++ +|+.+|....+ ||||||+.+
T Consensus 167 l~~~~~~~~p~~~~~~~~~~~~-RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~ 245 (448)
T 3jur_A 167 LKEMAERGTPVEERVFGKGHYL-RPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPES 245 (448)
T ss_dssp HHHHHHHTCCGGGCBCSTTCCC-CCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBS
T ss_pred hhhhhcccCcchhhhccccccC-CceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccC
Confidence 00111 1222334 3489999999999987 55666633322 999999999
Q ss_pred eeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCC------------Cc-eeeEEEE--EeeeEeEEEccc-eeEEEEE
Q 013493 180 GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASN------------DN-AITDVTI--FSAAIGVLLRGQ-ANIVTRV 243 (442)
Q Consensus 180 S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gn------------d~-~itDv~i--~~a~~Gv~~~gq-~~~~~gv 243 (442)
|+.|.|++|+|.. ||. +|.+.+. .| .|.|..+ ..+.=|+.++.. ...+++|
T Consensus 246 s~nV~I~n~~i~~-----gDD--------cIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV 312 (448)
T 3jur_A 246 CKYMLIEKCRFDT-----GDD--------SVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNV 312 (448)
T ss_dssp CEEEEEESCEEEE-----SSE--------EEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEE
T ss_pred CcCEEEEeeEEEe-----CCC--------cEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEE
Confidence 9999999999982 333 2333321 11 3344444 223337777433 3457778
Q ss_pred EEeccccccceeeEEEeecccceeeeee
Q 013493 244 HCYNKATAFGGIGILVKLADAALTRIDN 271 (442)
Q Consensus 244 h~~n~~t~~gg~gi~~~~~~~~~~ri~n 271 (442)
++.|+.-.-.--||.+|.-.-.-..+.|
T Consensus 313 ~v~n~~~~~t~~GirIKt~~g~gG~v~n 340 (448)
T 3jur_A 313 VARNNVYMNVERALRLKTNSRRGGYMEN 340 (448)
T ss_dssp EEESCEEESCSEEEEEECCTTTCSEEEE
T ss_pred EEEEEEEecccceEEEEEEcCCCceEee
Confidence 8888765322357777752112244555
No 2
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.95 E-value=8e-27 Score=252.88 Aligned_cols=188 Identities=22% Similarity=0.220 Sum_probs=150.5
Q ss_pred eeeecccCCCCCCCchhHHHHHHHHHHhhcc---CCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEe---
Q 013493 7 VFYPIGYGADPTGANESSDAILQALNDAFNV---QSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ--- 80 (442)
Q Consensus 7 vfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~---~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~--- 80 (442)
.+||+||||++||++|+|+|||+||++|-++ |..++. .+++||||+|+|+|++||.+++.. .++.
T Consensus 49 ~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~-------~~~~V~~P~GtYlvs~tI~l~~~t--~L~G~~~ 119 (758)
T 3eqn_A 49 FRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTT-------QPALVYFPPGTYKVSSPLVVLYQT--QLIGDAK 119 (758)
T ss_dssp EEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSS-------SCEEEEECSSEEEESSCEECCTTE--EEEECSS
T ss_pred EEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccc-------cceEEEECCceEEEcccEEccCCe--EEEecCC
Confidence 5699999999999999999999999986322 222222 247899999999999999998752 2232
Q ss_pred -cceEEeCCCCCCCcceEEEecCCCcccccceeeecccceeeecccCcccCccceeeeeeeEEEecce---EecceeEec
Q 013493 81 -GGTLRASDTFPSDRHLIELWAPNSQKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGF---RGGGIFVID 156 (442)
Q Consensus 81 -~GTLkAp~df~~d~~wI~f~~~n~l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n~---~~~GIt~~N 156 (442)
.++|||.+.|.+.. +|.. ...+++|..||.. .+.+++.+|||++|... ...+|+|..
T Consensus 120 ~~pvIka~~~F~G~~-li~~-----------d~y~~~G~~w~~~-------~~~F~r~irNlviD~t~~~~~~~gIhw~v 180 (758)
T 3eqn_A 120 NLPTLLAAPNFSGIA-LIDA-----------DPYLAGGAQYYVN-------QNNFFRSVRNFVIDLRQVSGSATGIHWQV 180 (758)
T ss_dssp SCCEEEECTTCCSSC-SEES-----------SCBCGGGCBSSCG-------GGCCCEEEEEEEEECTTCSSCEEEEECCC
T ss_pred CCCeEecCCCCCCcc-eeec-----------cccCCCCcccccc-------ccceeeeecceEEeccccCCCceEEEEEe
Confidence 35899999997643 4432 1234566666632 25678899999999832 478999999
Q ss_pred cccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEEeeeEeEEEcc
Q 013493 157 SARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG 235 (442)
Q Consensus 157 Sq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~~a~~Gv~~~g 235 (442)
+|.++|.||.| +|++..| ..|.||+|+ |+..+|.|+.|.++.+|+.+++
T Consensus 181 aQatsL~Nv~i------------------------~m~~~sg------~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn 230 (758)
T 3eqn_A 181 SQATSLINIVF------------------------QMSTAAG------NQHQGIFMENGSGGFLGDLVFNGGNIGATFGN 230 (758)
T ss_dssp CSSEEEEEEEE------------------------ECCCSTT------CCEEEEEECSCCCCEEEEEEEESCSEEEEEEC
T ss_pred cCceEEEEEEE------------------------EecCCCC------CcceeEEecCCCceEEEeeEEeCCceEEEcCC
Confidence 99999999999 8887654 249999999 7889999999999999999999
Q ss_pred ceeEEEEEEEecccccc
Q 013493 236 QANIVTRVHCYNKATAF 252 (442)
Q Consensus 236 q~~~~~gvh~~n~~t~~ 252 (442)
||+++|+++|+||.|++
T Consensus 231 QQfT~rnltF~~~~taI 247 (758)
T 3eqn_A 231 QQFTVRNLTFNNANTAI 247 (758)
T ss_dssp SCCEEEEEEEESCSEEE
T ss_pred cceEEeccEEeChHHHH
Confidence 99999999999999876
No 3
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.93 E-value=2e-24 Score=221.36 Aligned_cols=228 Identities=14% Similarity=0.151 Sum_probs=155.4
Q ss_pred CeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeC-CCCcceE-Eecc
Q 013493 5 GRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFP-PGVGNVV-VQGG 82 (442)
Q Consensus 5 ~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~-pc~gni~-i~~G 82 (442)
.++|||++|||++||++|+|+|||+||+ ||+. |.+|+||+|+|++..||.|+ + .++. ..+|
T Consensus 18 ~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~~--------------g~~V~vP~G~Yli~~~l~l~g~--s~v~l~l~G 80 (422)
T 1rmg_A 18 TKTCNILSYGAVADNSTDVGPAITSAWA-ACKS--------------GGLVYIPSGNYALNTWVTLTGG--SATAIQLDG 80 (422)
T ss_dssp HCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHTB--------------TCEEEECSSEEEECSCEEEESC--EEEEEEECS
T ss_pred CcEEEeeeccccCCCCcccHHHHHHHHH-HCCC--------------CCEEEECCCeEEeCCceeecCC--CeEEEEEcC
Confidence 4599999999999999999999999998 7742 35799999999996679998 4 3454 4789
Q ss_pred eEEeCCCCCCCcceEEEecCCC---cccccceeeecccceeeecccCcccCccceeeeeeeEEEecceEecceeEecccc
Q 013493 83 TLRASDTFPSDRHLIELWAPNS---QKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGIFVIDSAR 159 (442)
Q Consensus 83 TLkAp~df~~d~~wI~f~~~n~---l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n~~~~GIt~~NSq~ 159 (442)
+|.++.+.. ..|+.|...++ ..++|+|++||+|..||.+..+ ....+. +....|+.+.||+++||++
T Consensus 81 ~~l~~~~~~--~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~~~-------rp~~i~-~~~~~nv~I~~iti~nsp~ 150 (422)
T 1rmg_A 81 IIYRTGTAS--GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEGTY-------GARILR-LTDVTHFSVHDIILVDAPA 150 (422)
T ss_dssp EEEECCCCS--SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTTCC-------CCEEEE-EEEEEEEEEEEEEEECCSS
T ss_pred cEEcccCCC--CceEEEEecCceeEEeeccCEEEECCcchhhcCCCC-------CceEEE-EcccceEEEECeEEECCCc
Confidence 999976532 46888765444 3567899999999999964211 121122 3344588899999999876
Q ss_pred --EEEeee--------EEeee---ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEEEe
Q 013493 160 --IRINNC--------FFLHF---TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFS 226 (442)
Q Consensus 160 --~~I~Nc--------~~~~f---NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i~~ 226 (442)
+++.+| ++..- ||||||+.+ +.|.|+||+|. .||. +..|.-...+=.|.|..+.+
T Consensus 151 ~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~-----~gDD------~Iai~s~~~nI~I~n~~~~~ 218 (422)
T 1rmg_A 151 FHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVT-----NKDE------CVTVKSPANNILVESIYCNW 218 (422)
T ss_dssp CSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEE-----SSSE------EEEEEEEEEEEEEEEEEEES
T ss_pred eEEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEe-----CCCC------eEEeCCCCcCEEEEeEEEcC
Confidence 555555 33221 799999999 99999999997 2333 44444323334788888655
Q ss_pred eeEeEEEc--cceeEEEEEEEeccccccceeeEEEeecccceeeeeeee
Q 013493 227 AAIGVLLR--GQANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCY 273 (442)
Q Consensus 227 a~~Gv~~~--gq~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncy 273 (442)
+. |+.++ ++...+++|++.|+.-.--..||.+|..+- ...+.|-+
T Consensus 219 ~~-GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~ 265 (422)
T 1rmg_A 219 SG-GCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVL 265 (422)
T ss_dssp SS-EEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEE
T ss_pred Cc-ceeecccCCCCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEE
Confidence 44 88773 222346666666654222234678885332 24555544
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.90 E-value=5e-22 Score=211.84 Aligned_cols=284 Identities=14% Similarity=0.150 Sum_probs=172.7
Q ss_pred CCeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEE-e--
Q 013493 4 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVV-Q-- 80 (442)
Q Consensus 4 ~~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i-~-- 80 (442)
.+++|||++|||++||++|+|+|||+||+ ||+. |.+|++|+|+|++ +||.|++ ++.+ .
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--------------g~~v~vP~G~y~~-g~i~lks---~v~L~l~~ 213 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--------------GCRVEIPAGTYKS-GALWLKS---DMTLNLQA 213 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--------------TEEEEECSEEEEE-CCEECCS---SEEEEECT
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC--------------CCEEEECCCceEe-cceeccC---ceEEEecC
Confidence 45699999999999999999999999996 6742 3579999999998 8999964 3443 3
Q ss_pred cceEEeCCCC---CCC------------cceEEEec--------CCCcccccceeeecccceeeeccc------------
Q 013493 81 GGTLRASDTF---PSD------------RHLIELWA--------PNSQKLKRTDAIKIDRNYVFNDVK------------ 125 (442)
Q Consensus 81 ~GTLkAp~df---~~d------------~~wI~f~~--------~n~l~v~G~GtfDgqG~~~W~~~~------------ 125 (442)
+++|+|+.++ +.. ..||.... .+.+.+.|+|++||+|..+|....
T Consensus 214 gatL~~s~d~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~ 293 (608)
T 2uvf_A 214 GAILLGSENPDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQY 293 (608)
T ss_dssp TEEEEECSCGGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEE
T ss_pred CcEEEecCCHHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCcccccccccccccccccccccc
Confidence 7899998743 310 02555554 467899999999999977763211
Q ss_pred -----Cccc----------------C-----ccceeeeeeeEEE--ecceEecceeEecccc--EEEeeeEE---eee--
Q 013493 126 -----DQTA----------------R-----TYYEDITFRDVLF--DSGFRGGGIFVIDSAR--IRINNCFF---LHF-- 170 (442)
Q Consensus 126 -----c~~~----------------~-----~~c~~iT~rnl~~--D~n~~~~GIt~~NSq~--~~I~Nc~~---~~f-- 170 (442)
|+.. . .+|... ++-|.| ..++.+.|++++||++ +++.+|.. .++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r-P~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i 372 (608)
T 2uvf_A 294 VASKNSKVHEDGILAKNQVEKAVSDGMDLKNAYGQRR-SSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIH 372 (608)
T ss_dssp CCCCTTTHHHHBSHHHHHHHHHHHTTCCHHHHHHHSS-CCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEE
T ss_pred cccccccccccccccccccccccccccccccccccCC-CeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEE
Confidence 1100 0 001111 222333 3489999999999977 55666632 222
Q ss_pred ------ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec----------CCCceeeEEEEEeeeEeEEEc
Q 013493 171 ------TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA----------SNDNAITDVTIFSAAIGVLLR 234 (442)
Q Consensus 171 ------NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~----------gnd~~itDv~i~~a~~Gv~~~ 234 (442)
||||||+.+|+.|.|++|+|.. ||. .+.|.-. ..+-.|.|..+.++-=++.++
T Consensus 373 ~~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDD------~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iG 441 (608)
T 2uvf_A 373 QTYDANNGDGIEFGNSQNVMVFNNFFDT-----GDD------CINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTG 441 (608)
T ss_dssp ECTTCTTCCSEEEESCEEEEEESCEEEC-----SSC------SEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEE
T ss_pred cCCCCCCCCeEEecCCceEEEEeeEEec-----CCc------eEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEc
Confidence 8999999999999999999982 343 2333211 111245555554432222233
Q ss_pred -cceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeCC--eEEEEEceEEeeccee--Eee--eccc
Q 013493 235 -GQANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP--VQVHVTNGFFLGDANI--VLK--SIKG 307 (442)
Q Consensus 235 -gq~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~dp--~~~~i~~~~flgd~~i--~l~--~~~~ 307 (442)
.....+++|++.|+.---...||.+|--...-..+.|.+. ..|.|++- .-++|.-.+ ++..- -.. ...+
T Consensus 442 S~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~gG~v~nI~~--~ni~m~~v~~~~i~I~~~y--~~~~~~~~~~~~~~~~ 517 (608)
T 2uvf_A 442 SHTGAWIEDILAENNVMYLTDIGLRAKSTSTIGGGARNVTF--RNNAMRDLAKQVMVMTLDY--ADSNANIDYPPAKIPA 517 (608)
T ss_dssp SCCTTCEEEEEEESCEEESCSEEEEEEEETTTCCEEEEEEE--EEEEEEEESSEEEEEEEEC--CCCSCCCSSCCCSSCC
T ss_pred ccCCCCEEEEEEEeEEEECCCceEEEeeecCCCceEECcEE--EeeEEEccccccEEEEecc--CCCCcccccCCcCCCC
Confidence 2233566677766643323358888853212234555543 34444443 234444322 32211 001 1246
Q ss_pred eeeeeEEeeeeccCC
Q 013493 308 RISGLTIVENMFNGS 322 (442)
Q Consensus 308 ~~~g~~i~~n~f~g~ 322 (442)
.++++.|-|-.|.+-
T Consensus 518 ~~~~V~i~nI~~~n~ 532 (608)
T 2uvf_A 518 QFYDFTLKNVTVDNS 532 (608)
T ss_dssp EEEEEEEEEEEEEEE
T ss_pred ccccEEEEeEEEEee
Confidence 788888887777653
No 5
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.88 E-value=7.3e-21 Score=187.96 Aligned_cols=162 Identities=15% Similarity=0.208 Sum_probs=107.2
Q ss_pred eeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEec-------eEEeCCCCcceE-
Q 013493 7 VFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISK-------PIRFPPGVGNVV- 78 (442)
Q Consensus 7 vfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~-------pI~f~pc~gni~- 78 (442)
+|||++|||+|||++|+|+|||+||++||+. ||.+|+||+|+|+++. ||.+++. +.
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-------------gg~~v~~p~G~y~~~~~~~~~~g~l~~~~~---v~l 65 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-------------GGGTVYLPAGEYRVSAAGEPGDGCLMLKDG---VYL 65 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-------------TSEEEEECSEEEEECCCSSGGGCSEECCTT---EEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-------------CCCEEEECCeEEEEcccccCCcccEEecCC---eEE
Confidence 6999999999999999999999999999852 4578999999999963 7776543 33
Q ss_pred Eecc----eEEeCCCCCCC----------cceEEEecCCCcccccc-----eeeecccceeeecccCcccCccceeeeee
Q 013493 79 VQGG----TLRASDTFPSD----------RHLIELWAPNSQKLKRT-----DAIKIDRNYVFNDVKDQTARTYYEDITFR 139 (442)
Q Consensus 79 i~~G----TLkAp~df~~d----------~~wI~f~~~n~l~v~G~-----GtfDgqG~~~W~~~~c~~~~~~c~~iT~r 139 (442)
..+| +|+++++.... ..+ .+.....+++.|. |++|+ ||... |+.....|..++++
T Consensus 66 ~g~g~~~t~l~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~I~G~~~~~~G~idG----w~~~~-~~~~~~~~~nv~I~ 139 (377)
T 2pyg_A 66 AGAGMGETVIKLIDGSDQKITGMVRSAYGEET-SNFGMRDLTLDGNRDNTSGKVDG----WFNGY-IPGGDGADRDVTIE 139 (377)
T ss_dssp EESSBTTEEEEECTTCBSCEEEEEECCTTSCC-EEEEEEEEEEECCGGGCBSCEEE----EEECS-CTTSSCCEEEEEEE
T ss_pred EEcCCCCcEEEecCCCccCccceEeccCCCcc-eEEEEEEEEEECCCccCCccccc----eeccc-CccccccccceEEE
Confidence 2332 34554332110 001 1223345566665 67765 66533 22112357777676
Q ss_pred eEEEecceEecceeEecccc-EEEeeeEEeeeccccEEEeeeeeEEEeeeeee
Q 013493 140 DVLFDSGFRGGGIFVIDSAR-IRINNCFFLHFTTQGILVQRGHETFISSCFLG 191 (442)
Q Consensus 140 nl~~D~n~~~~GIt~~NSq~-~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Ig 191 (442)
++.+- +....|+.+.++.. +.+.||.+..-..|||.+..|+...|+++.+-
T Consensus 140 ~~~i~-n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~ 191 (377)
T 2pyg_A 140 RVEVR-EMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAY 191 (377)
T ss_dssp EEEEE-CCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEE
T ss_pred eEEEE-ecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEE
Confidence 65442 33445666666543 55778877777889999999998888888644
No 6
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.87 E-value=3.8e-21 Score=193.40 Aligned_cols=239 Identities=16% Similarity=0.192 Sum_probs=151.8
Q ss_pred eeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecC--ceEEEeceEEeCCCCcceEEecc--
Q 013493 7 VFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQG--GNYKISKPIRFPPGVGNVVVQGG-- 82 (442)
Q Consensus 7 vfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPg--GtYlIs~pI~f~pc~gni~i~~G-- 82 (442)
+++|++|| .+|+|+|||+||+ ||+. ||.++++|+ |+|++ +||.|++.. .+ ..++
T Consensus 14 ~~~v~~~G-----~~~dT~aiq~Ai~-ac~~-------------Gg~v~~~~~~~g~yl~-g~i~l~s~v-tL-~l~~Ga 71 (376)
T 1bhe_A 14 SCTTLKAD-----SSTATSTIQKALN-NCDQ-------------GKAVRLSAGSTSVFLS-GPLSLPSGV-SL-LIDKGV 71 (376)
T ss_dssp EEEEEECC-----SSBCHHHHHHHHT-TCCT-------------TCEEEEECSSSSEEEE-SCEECCTTC-EE-EECTTC
T ss_pred eEEECCCC-----CCccHHHHHHHHH-Hhcc-------------CCcEEEECCCCceEEE-eEEEECCCC-EE-EECCCe
Confidence 79999986 6899999999997 7742 344555553 89987 899998432 13 3444
Q ss_pred eEEeCCC---CCC--------------CcceEEEecCCCcccccceeeecccc--------eeeeccc-CcccCccceee
Q 013493 83 TLRASDT---FPS--------------DRHLIELWAPNSQKLKRTDAIKIDRN--------YVFNDVK-DQTARTYYEDI 136 (442)
Q Consensus 83 TLkAp~d---f~~--------------d~~wI~f~~~n~l~v~G~GtfDgqG~--------~~W~~~~-c~~~~~~c~~i 136 (442)
+|+|+++ |+. ...||.+...+.+.++|.|++||+|. .||.+.. |+. ...|...
T Consensus 72 ~L~~s~~~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~-~~~~~~r 150 (376)
T 1bhe_A 72 TLRAVNNAKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKV-KKLKQNT 150 (376)
T ss_dssp EEEECSCSGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHH-HTCEECC
T ss_pred EEEeCCCHHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccc-cCccCCC
Confidence 9999763 322 12599999999999999999999994 5675321 111 0012111
Q ss_pred eeeeEEE--ecceEecceeEeccccEE--Eeee---EEeee---------ccccEEEeeeeeEEEeeeeeeeccccCCCC
Q 013493 137 TFRDVLF--DSGFRGGGIFVIDSARIR--INNC---FFLHF---------TTQGILVQRGHETFISSCFLGQRSTVGGDP 200 (442)
Q Consensus 137 T~rnl~~--D~n~~~~GIt~~NSq~~~--I~Nc---~~~~f---------NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~ 200 (442)
++-|.| ..++.+.|++++||+++| +.+| .+.++ ||||||+.+|+.|.|++|+|. .||.
T Consensus 151 -p~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~-----~gDD 224 (376)
T 1bhe_A 151 -PRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIA-----TGDD 224 (376)
T ss_dssp -CCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEE-----CSSC
T ss_pred -CeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEe-----cCCC
Confidence 222333 348899999999998744 5555 33333 999999999999999999998 3444
Q ss_pred CCcCcceEEEEec-----CCCceeeEEEEEeeeEeEEEccceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeec
Q 013493 201 GEKGFSGTAIDLA-----SNDNAITDVTIFSAAIGVLLRGQANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLD 275 (442)
Q Consensus 201 ~e~~~~gtgI~l~-----gnd~~itDv~i~~a~~Gv~~~gq~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld 275 (442)
+++|.-. +.+=.|.|..+.++ -|+.++.....+++|++.|+.-----.|+.+|.-.-....+.|-+
T Consensus 225 ------cIaiks~~~~~~s~nI~I~n~~~~~g-hGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~-- 295 (376)
T 1bhe_A 225 ------NVAIKAYKGRAETRNISILHNDFGTG-HGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVR-- 295 (376)
T ss_dssp ------SEEEEECTTSCCEEEEEEEEEEECSS-SCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEE--
T ss_pred ------eEEEcccCCCCCceEEEEEeeEEEcc-ccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEE--
Confidence 5666631 22225666666543 456664433356666666665333345777785211234455444
Q ss_pred ccceeeeC
Q 013493 276 YTGIVLED 283 (442)
Q Consensus 276 ~~~iv~~d 283 (442)
|..|.|++
T Consensus 296 f~ni~~~~ 303 (376)
T 1bhe_A 296 YSNVVMKN 303 (376)
T ss_dssp EEEEEEES
T ss_pred EEeEEEeC
Confidence 33444444
No 7
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.85 E-value=6e-20 Score=191.08 Aligned_cols=214 Identities=13% Similarity=0.164 Sum_probs=139.4
Q ss_pred Ceeee-ecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEe-cc
Q 013493 5 GRVFY-PIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ-GG 82 (442)
Q Consensus 5 ~rvfN-V~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~-~G 82 (442)
.++|+ |++|||++||++|+|+|||+||++ |+.. | ||++|++|+|+|++ +||.|++.. .+.+. ++
T Consensus 19 ~~~~~~V~dfGA~gDG~tDdT~Aiq~Aida-c~~~------~-----ggg~V~vP~GtYl~-g~I~lks~v-~L~l~~Ga 84 (464)
T 1h80_A 19 DVNYDLVDDFGANGNDTSDDSNALQRAINA-ISRK------P-----NGGTLLIPNGTYHF-LGIQMKSNV-HIRVESDV 84 (464)
T ss_dssp SEEEEHHHHHCCCTTSSSBCHHHHHHHHHH-HHTS------T-----TCEEEEECSSEEEE-CSEECCTTE-EEEECTTC
T ss_pred cceeeehhccCcCCCCCchhHHHHHHHHHH-Hhhc------c-----CCcEEEECCCeEEE-eeEeccCce-EEEEcCCc
Confidence 46899 999999999999999999999964 5321 0 35789999999998 899997531 12233 46
Q ss_pred eEEeCCCC-CCCcceEEE---ecCCCcccccce---eeecccceeeecccCcccCccceeeeeeeEEEecceEecceeEe
Q 013493 83 TLRASDTF-PSDRHLIEL---WAPNSQKLKRTD---AIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGIFVI 155 (442)
Q Consensus 83 TLkAp~df-~~d~~wI~f---~~~n~l~v~G~G---tfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n~~~~GIt~~ 155 (442)
+|+++.+- +.+..|+.+ ...+.+.+.|.| ++||+|.. .+....++ +....|+.+.+|+++
T Consensus 85 tL~~s~~td~~~y~~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~------------~~rp~~i~-~~~~~Nv~I~gIti~ 151 (464)
T 1h80_A 85 IIKPTWNGDGKNHRLFEVGVNNIVRNFSFQGLGNGFLVDFKDSR------------DKNLAVFK-LGDVRNYKISNFTID 151 (464)
T ss_dssp EEEECCCTTCSCEEEEEESSSSCEEEEEEEECTTCEEEECTTCS------------CCBEEEEE-ECSEEEEEEEEEEEE
T ss_pred EEEeccCCCcccCCceEeecccCccceEEECcCcceEEeCCCCC------------CCCceEEE-EEeeccEEEeeeEEe
Confidence 89998631 122235655 456678888888 88888742 11111111 222348899999999
Q ss_pred ccccEEEeeeEEeee-ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEE-EEecCCCc-eeeEEEEEeeeEeEE
Q 013493 156 DSARIRINNCFFLHF-TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTA-IDLASNDN-AITDVTIFSAAIGVL 232 (442)
Q Consensus 156 NSq~~~I~Nc~~~~f-NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtg-I~l~gnd~-~itDv~i~~a~~Gv~ 232 (442)
|+.. +.+|...++ ||||||+ .++.|.|++++|... +. +.| ++..+..| .|.|..+.+ ..|+.
T Consensus 152 n~w~--ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I~~g-----dd------giGs~~~~~~~NV~V~n~~~~g-g~GIr 216 (464)
T 1h80_A 152 DNKT--IFASILVDVTERNGRLH-WSRNGIIERIKQNNA-----LF------GYGLIQTYGADNILFRNLHSEG-GIALR 216 (464)
T ss_dssp CCSC--BSCSEEECEEEETTEEE-EEEEEEEEEEEEESC-----CT------TCEEEEESEEEEEEEEEEEEES-SEEEE
T ss_pred ccce--EeeceeeeeecCCCcee-eccCEEEeceEEecC-----CC------eEEecccCCEeEEEEEeeEEEC-CCEEE
Confidence 9765 445532233 9999999 999999999999933 11 335 44444333 566666555 56665
Q ss_pred Ecc--------ceeEEEEEEEeccccccceeeEEEe
Q 013493 233 LRG--------QANIVTRVHCYNKATAFGGIGILVK 260 (442)
Q Consensus 233 ~~g--------q~~~~~gvh~~n~~t~~gg~gi~~~ 260 (442)
+.. ....+++|++-|+.-.-...+|.++
T Consensus 217 Iktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~ 252 (464)
T 1h80_A 217 METDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFG 252 (464)
T ss_dssp EECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEE
T ss_pred EEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEe
Confidence 522 1235666666666543333456666
No 8
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.84 E-value=1.5e-19 Score=196.41 Aligned_cols=310 Identities=14% Similarity=0.131 Sum_probs=190.2
Q ss_pred CCeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEe---
Q 013493 4 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ--- 80 (442)
Q Consensus 4 ~~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~--- 80 (442)
.+++|||+||||+|||++|+|+|||+||+++ .+|+||+|+|++++||.|++.. .+...
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~aG------------------g~V~IPaGtYlisg~I~L~snv-~L~Geg~~ 79 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIESG------------------FPVYVPYGTFMVSRGIKLPSNT-VLTGAGKR 79 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHTT------------------SCEEECSEEEEESSCEEECSSC-EEEEEEEE
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHcC------------------CEEEECCccEEEEeEEEECCCc-EEEEecCC
Confidence 3568999999999999999999999999852 2599999999999999998432 23222
Q ss_pred cceEEeCCCCCCCc----ceEEEecCCCcccccceeeecccceeeecc--cCc-ccC----ccceeeeeeeEEEecceEe
Q 013493 81 GGTLRASDTFPSDR----HLIELWAPNSQKLKRTDAIKIDRNYVFNDV--KDQ-TAR----TYYEDITFRDVLFDSGFRG 149 (442)
Q Consensus 81 ~GTLkAp~df~~d~----~wI~f~~~n~l~v~G~GtfDgqG~~~W~~~--~c~-~~~----~~c~~iT~rnl~~D~n~~~ 149 (442)
.++|++++++|... .||.+...+.+.++|. ++||+|+..|... .|. .+. ..|..++++++.+-.. ..
T Consensus 80 ~t~Lk~~~d~p~~~~li~~lI~a~gveNItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NS-p~ 157 (772)
T 3gqn_A 80 NAVIRFMDSVGRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDC-TL 157 (772)
T ss_dssp EEEEEECTTCCSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESC-SS
T ss_pred CCEEEeCCCCCCCCceeeeeeeccCceeEEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeC-CC
Confidence 35899998877643 1234556677888887 9999998333211 111 000 2444455555444220 01
Q ss_pred cceeEec-----------------cccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEe
Q 013493 150 GGIFVID-----------------SARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDL 212 (442)
Q Consensus 150 ~GIt~~N-----------------Sq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l 212 (442)
.++++.+ |+.+.|.||++.....|+|.+.+++.|.|+||++.... |. . .+-||.+
T Consensus 158 ~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gph--G~-S-----~~~GIsI 229 (772)
T 3gqn_A 158 HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPR--LT-A-----NCNGFEI 229 (772)
T ss_dssp CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCS--SS-S-----SCCSEEE
T ss_pred CCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEECCC--CC-C-----CcccEEe
Confidence 2222221 56688999999888999999999999999999994111 11 0 1457777
Q ss_pred cCC--CceeeEEEEEeeeEeEEEc--cceeEEEEEEEeccccc----------ccee-----------eEEEeeccc-ce
Q 013493 213 ASN--DNAITDVTIFSAAIGVLLR--GQANIVTRVHCYNKATA----------FGGI-----------GILVKLADA-AL 266 (442)
Q Consensus 213 ~gn--d~~itDv~i~~a~~Gv~~~--gq~~~~~gvh~~n~~t~----------~gg~-----------gi~~~~~~~-~~ 266 (442)
.+. +=.|.|..|....-|+.+- +..-..++||+.|.-.. +|-- .|-++ .+ ..
T Consensus 230 Gsgs~NVtV~Nc~~~nT~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~--n~~~~ 307 (772)
T 3gqn_A 230 DDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVAS--NLVSI 307 (772)
T ss_dssp CTTCEEEEEEEEEEESSSEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEE--EEEEE
T ss_pred cCCcccEEEEceEEECCCcEEEEEEeCCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEee--cceEE
Confidence 732 3378888898888898884 22335677777653221 1110 01111 00 01
Q ss_pred eeeee----eeecccceeeeCCeEEEEEceEEeecceeEee----eccceeeeeEEeeeeccCCCCCCccEEEecCCcce
Q 013493 267 TRIDN----CYLDYTGIVLEDPVQVHVTNGFFLGDANIVLK----SIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSN 338 (442)
Q Consensus 267 ~ri~n----cyld~~~iv~~dp~~~~i~~~~flgd~~i~l~----~~~~~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~ 338 (442)
+-.-| |=++..+|+++.---|.|.+-.+.||.+-=+| ++.=+.+.+++-+.+..|--+...+| +|-|-=..
T Consensus 308 ~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i-~v~gg~~~ 386 (772)
T 3gqn_A 308 RPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFSNSENGI-YVIGGSRG 386 (772)
T ss_dssp SCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEESCTTCSEEE-EECCSTTC
T ss_pred cccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCceEEEEEecceeEEcceEEecccCCCCCe-EEeCCCCC
Confidence 11112 22344489999999999999999999874322 11123445555555555663444444 34333333
Q ss_pred eeEEEEe
Q 013493 339 IDQVVIE 345 (442)
Q Consensus 339 i~~v~v~ 345 (442)
-|.|-|+
T Consensus 387 ~~~v~i~ 393 (772)
T 3gqn_A 387 GDAVNIS 393 (772)
T ss_dssp CEEEEEE
T ss_pred CCeEEEe
Confidence 3444443
No 9
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.84 E-value=2.3e-19 Score=191.61 Aligned_cols=322 Identities=14% Similarity=0.157 Sum_probs=195.2
Q ss_pred CCeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEe---
Q 013493 4 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQ--- 80 (442)
Q Consensus 4 ~~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~--- 80 (442)
.+++|||+||||+|||++|+|+|||+||+++ .+|+||+|+|++++||.|++.. .+...
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~G------------------g~V~iP~GtYlis~~l~l~snv-~L~g~g~~ 79 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIESG------------------FPVYVPYGTFMVSRGIKLPSNT-VLTGAGKR 79 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHTS------------------SCEEECSEEEEESSCEEECSSE-EEEESCTT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHcC------------------CEEEECCccEEEeCceEECCCc-EEEEeeCC
Confidence 3568999999999999999999999999852 2599999999999999998531 23222
Q ss_pred cceEEeCCCCCCCcc----eEEEecCCCcccccceeeecccceeeeccc--Cc-ccC----ccceeeeeeeEEEecceEe
Q 013493 81 GGTLRASDTFPSDRH----LIELWAPNSQKLKRTDAIKIDRNYVFNDVK--DQ-TAR----TYYEDITFRDVLFDSGFRG 149 (442)
Q Consensus 81 ~GTLkAp~df~~d~~----wI~f~~~n~l~v~G~GtfDgqG~~~W~~~~--c~-~~~----~~c~~iT~rnl~~D~n~~~ 149 (442)
.++|++++++|.... ||.+...+.+.++|. ++||+|+.+|..++ |. .+. ..|..++++++.+-.. ..
T Consensus 80 ~t~L~~~~~~p~~~~li~~lI~a~~~~NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NS-p~ 157 (609)
T 3gq8_A 80 NAVIRFMDSVGRGESLMYNENVTTGNENIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDC-TL 157 (609)
T ss_dssp TEEEEECTTCCSSCCSEEESCTTTCCEEEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESC-SS
T ss_pred CCEEEeCCCCCCCCceeeeeeeecccccEEEEee-EEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeC-CC
Confidence 258999988775431 234455667888887 99999884332111 11 000 2455555555544221 01
Q ss_pred cceeEec-----------------cccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEe
Q 013493 150 GGIFVID-----------------SARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDL 212 (442)
Q Consensus 150 ~GIt~~N-----------------Sq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l 212 (442)
.++++.+ |+.+.|.||++.....|+|.+.+++.|.|+||++.. +. |. ..+-||.+
T Consensus 158 ~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~g-p~-G~------S~~~GIsI 229 (609)
T 3gq8_A 158 HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHD-PR-LT------ANCNGFEI 229 (609)
T ss_dssp CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEEC-CS-SC------SSCCSEEE
T ss_pred CCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEEC-CC-CC------CCcccEEc
Confidence 2222221 466889999998889999999999999999999941 11 10 01347777
Q ss_pred cC-CCc-eeeEEEEEeeeEeEEEc--cceeEEEEEEEeccccc-------c---ceeeE---------EEeeccc-ceee
Q 013493 213 AS-NDN-AITDVTIFSAAIGVLLR--GQANIVTRVHCYNKATA-------F---GGIGI---------LVKLADA-ALTR 268 (442)
Q Consensus 213 ~g-nd~-~itDv~i~~a~~Gv~~~--gq~~~~~gvh~~n~~t~-------~---gg~gi---------~~~~~~~-~~~r 268 (442)
.+ ..+ .|.|..|....-|+.+- +..-..++|+++|+-.. + |--+. -+.++.+ ..+.
T Consensus 230 Gsgs~NVtV~Nc~i~nt~~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 230 DDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp CTTCEEEEEESEEEESSSEEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESC
T ss_pred cCCcccEEEEeeEEECCCCEEEEEecCCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEee
Confidence 63 223 78888888877787774 22335677777775321 0 11000 0000000 0111
Q ss_pred eee----eeecccceeeeCCeEEEEEceEEeecceeEee----eccceeeeeEEeeeeccCCCCCCccEEEecC----Cc
Q 013493 269 IDN----CYLDYTGIVLEDPVQVHVTNGFFLGDANIVLK----SIKGRISGLTIVENMFNGSPARNVPIIKLDG----EF 336 (442)
Q Consensus 269 i~n----cyld~~~iv~~dp~~~~i~~~~flgd~~i~l~----~~~~~~~g~~i~~n~f~g~~~~~~~iv~l~g----~f 336 (442)
.-| |=.+..+|+++.-.-|.|.+-.++||.+-=+| ++.=+.+.+++-+-+..|--+...+|...-| .-
T Consensus 310 ~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~~~~~~ 389 (609)
T 3gq8_A 310 NNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGSRGGDA 389 (609)
T ss_dssp CCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCCCTTCC
T ss_pred cccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCceEEEEEecceeEEcceEEecccCCCCCeEEeCCCCcCCe
Confidence 112 22333489999999999999999999875322 1112344555555555565444444443222 22
Q ss_pred ceeeEEEEecccccceee
Q 013493 337 SNIDQVVIERNNVNGMSL 354 (442)
Q Consensus 337 ~~i~~v~v~~n~~~gm~~ 354 (442)
=.|..+.|.+-...|+.+
T Consensus 390 v~i~n~~i~~s~~~gi~~ 407 (609)
T 3gq8_A 390 VNISNVTLNNSGRYGVSI 407 (609)
T ss_dssp EEEEEEEEESCCSEEEEE
T ss_pred EEEeccEEeecccccEEe
Confidence 234555555554556654
No 10
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.80 E-value=5.9e-19 Score=188.02 Aligned_cols=195 Identities=11% Similarity=-0.024 Sum_probs=129.8
Q ss_pred CeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCc-eEEE-----------eceEEeCC
Q 013493 5 GRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGG-NYKI-----------SKPIRFPP 72 (442)
Q Consensus 5 ~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgG-tYlI-----------s~pI~f~p 72 (442)
.++|||+||||++| +|+|||+||+ ||+.. ||++|++|+| +|++ ++||.|++
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~------------GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkS 111 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAID-YVSSN------------GGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRS 111 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHH-HHHHT------------TCEEEEECTTCEEEECSCCCGGGGGGTEEEECCT
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHH-Hhhhc------------CCCEEEECCCCEEEecccccccccccccceEEcC
Confidence 45899999999998 7999999996 56432 5678999999 9998 27888864
Q ss_pred CCcceE-EecceEEeCCC---CCC----Ccce---EEEecCCCcccccceeeecccceeeecccCcccCccceeeeeeeE
Q 013493 73 GVGNVV-VQGGTLRASDT---FPS----DRHL---IELWAPNSQKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDV 141 (442)
Q Consensus 73 c~gni~-i~~GTLkAp~d---f~~----d~~w---I~f~~~n~l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl 141 (442)
++. ..+|+|+|+++ ||. ...| |.+...+.+++.|+|++||+|..||... ...|.. ++ +
T Consensus 112 ---nVtL~LdGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~-----~~~~~R--P~-l 180 (600)
T 2x6w_A 112 ---NVNLNIEGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASS-----QLRNGV--AF-G 180 (600)
T ss_dssp ---TEEEEECSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTT-----CCEEEE--EC-C
T ss_pred ---ceEEeeecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCcccccccc-----ccCCCC--CE-E
Confidence 354 47889999864 432 1245 7777888899999999999999999521 111211 11 2
Q ss_pred EEecceEecceeEecc-cc--EEE---eeeE---Eeee----------ccccEEEeeeeeEEEeeeeeeeccccCCCCCC
Q 013493 142 LFDSGFRGGGIFVIDS-AR--IRI---NNCF---FLHF----------TTQGILVQRGHETFISSCFLGQRSTVGGDPGE 202 (442)
Q Consensus 142 ~~D~n~~~~GIt~~NS-q~--~~I---~Nc~---~~~f----------NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e 202 (442)
.+.. .++.||+++|| ++ +++ .+|. +.++ ||||| |.|+||+|.. ||.
T Consensus 181 ~f~~-c~I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDD-- 245 (600)
T 2x6w_A 181 RSYN-CSVTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VES-- 245 (600)
T ss_dssp SEEE-EEEESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EES--
T ss_pred EEee-eEEeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCc--
Confidence 2222 12999999999 77 556 5663 2222 69999 9999999982 333
Q ss_pred cCcceEEE-EecCCCceeeEEEEEeeeEeEEEcc-ceeEEEEEEEec
Q 013493 203 KGFSGTAI-DLASNDNAITDVTIFSAAIGVLLRG-QANIVTRVHCYN 247 (442)
Q Consensus 203 ~~~~gtgI-~l~gnd~~itDv~i~~a~~Gv~~~g-q~~~~~gvh~~n 247 (442)
.+.| .-..+.+.... .+..+--|+.++. ....+++|++.|
T Consensus 246 ----CIAI~KSGs~~ni~~e-~~~~GHgGISIGSe~~ggV~NV~V~N 287 (600)
T 2x6w_A 246 ----CYFSMSSSFARNIACS-VQLHQHDTFYRGSTVNGYCRGAYVVM 287 (600)
T ss_dssp ----CEEECCCTTHHHHEEE-EEECSSSEEEESCEEEEESEEEEEEE
T ss_pred ----EEEEecCCCcCCeEEE-EEcCCCCcEEecccccCcEEEEEEEE
Confidence 3333 21111111122 2333334666643 234688888887
No 11
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.78 E-value=7.4e-18 Score=174.16 Aligned_cols=261 Identities=15% Similarity=0.174 Sum_probs=164.8
Q ss_pred CeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCc----eEEEeceEEeC-------CC
Q 013493 5 GRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGG----NYKISKPIRFP-------PG 73 (442)
Q Consensus 5 ~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgG----tYlIs~pI~f~-------pc 73 (442)
++.|||+||||++||++|+|+|||+||++||+.+ ||++||+|+| +|+++++|.++ +|
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~------------GGGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~ 116 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLP------------SGGELFIPASNQAVGYIVGSTLLIPGGVNIRGVG 116 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTST------------TCEEEECCCCSSTTCEEESSCEEECTTEEEECCS
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcC------------CCeEEEECCCCcceeEEECCeEEecCCeEEEEec
Confidence 3589999999999999999999999999999643 4578999999 99998888765 34
Q ss_pred CcceEE----ecceEEeCCCCCCCcceEEEecCCCcccccceeeecccceeeecccCcccCccceeeeeeeEEEecceEe
Q 013493 74 VGNVVV----QGGTLRASDTFPSDRHLIELWAPNSQKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRG 149 (442)
Q Consensus 74 ~gni~i----~~GTLkAp~df~~d~~wI~f~~~n~l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n~~~ 149 (442)
+..+.. ..|++.++. |+ .||.+...+++.++|+|++||++..++..+.-. ..+..+.++ ++.+
T Consensus 117 ~AtIl~s~~~I~GtIia~~-y~---s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~--------Rq~~~~~fd-nV~V 183 (514)
T 2vbk_A 117 KASQLRAKSGLTGSVLRLS-YD---SDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVI--------RQVYGWVFD-NVMV 183 (514)
T ss_dssp TTSEEEECTTCCSEEEEEC-CC---SCCSCEEEESCEEECCSSSEEEEESCCTTCSSC--------CCEESEEEE-SCEE
T ss_pred CceEeeccccccccEEecc-CC---ccccccCceEEEEECCCeEeCCCCCccccceee--------eccceEEee-eEEE
Confidence 443322 456666653 33 377788888999999999999765432111000 012223333 6777
Q ss_pred cceeEe--cccc--EEEeeeEEeeeccccEEEe-eeeeEEEeeeeeeeccccCCC-----------------CCCcCcce
Q 013493 150 GGIFVI--DSAR--IRINNCFFLHFTTQGILVQ-RGHETFISSCFLGQRSTVGGD-----------------PGEKGFSG 207 (442)
Q Consensus 150 ~GIt~~--NSq~--~~I~Nc~~~~fNTDGIhI~-~S~~V~I~nS~Igq~~t~gg~-----------------~~e~~~~g 207 (442)
.+++.. ++.. +|...|.+..+. +|||+. +.+.|.|.+|.|. .|.| |.|+ ..|
T Consensus 184 n~Vt~~v~~Sg~WTIhPi~Cqnvt~r-~gL~f~eSCrNV~IsnC~Fs----VGDdciaiksGk~~~~~~~~~~se~-~~h 257 (514)
T 2vbk_A 184 NEVETAYLMQGLWHSKFIACQAGTCR-VGLHFLGQCVSVSVSSCHFS----RGNYSADESFGIRIQPQTYAWSSEA-VRS 257 (514)
T ss_dssp EEEEEEEEEESEEEEEEESCEEEEEE-EEEEEESCCEEEEEESCEEE----CTTSCCTTCEEEEEECBCCTTTSSC-BCC
T ss_pred EeEEEeEeccCcEEEeEeccCceecc-cCccccCCCCeEEEeccEEe----cCcceeeeecCceecccccCCcchh-ccc
Confidence 777653 3433 557888777765 799988 6899999999987 2222 3343 447
Q ss_pred EEEEecCC------Cc--eeeEEE---------EEeeeEeEEEccce--eEEEEEEEeccccccc---eeeEEEeecccc
Q 013493 208 TAIDLASN------DN--AITDVT---------IFSAAIGVLLRGQA--NIVTRVHCYNKATAFG---GIGILVKLADAA 265 (442)
Q Consensus 208 tgI~l~gn------d~--~itDv~---------i~~a~~Gv~~~gq~--~~~~gvh~~n~~t~~g---g~gi~~~~~~~~ 265 (442)
=+|-+.+- -| .|.|-+ =+.+..|+++.+-- +.+++ -|=.+.+-| =+|||.+-|-.+
T Consensus 258 gav~igSE~m~~Gvk~~v~v~~Clf~~td~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 335 (514)
T 2vbk_A 258 EAIILDSETMCIGFKNAVYVHDCLDLHMEQLDLDYCGSTGVVIENVNGGFSFSN--SWIAADADGTEQFTGIYFRTPTST 335 (514)
T ss_dssp EEEEEESSEEEESCSEEEEESCCEEEEEESEEEEEESSEEEEESCCEEEEEEEE--EEEEECTTCCSCCEEEEECCCSSC
T ss_pred ccEEECchhhcccccccEEEEeeeccCCccccccccCCcceEEEeccCceeecc--ceEEecCCCcceeEEEEEeCCCcc
Confidence 77776654 22 222222 24678888885432 22333 333343433 278999988877
Q ss_pred eee-ee-eeee---------cccceeee-CCeEEEEEceEEeecc
Q 013493 266 LTR-ID-NCYL---------DYTGIVLE-DPVQVHVTNGFFLGDA 298 (442)
Q Consensus 266 ~~r-i~-ncyl---------d~~~iv~~-dp~~~~i~~~~flgd~ 298 (442)
|.+ |+ .-++ .-.+|.+| ...-+-+++.-..||-
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (514)
T 2vbk_A 336 QSHKIVSGVHINTANKNTAANNQSIAIEQSAIFVFVSGCTLTGDE 380 (514)
T ss_dssp CCCEEEEEEEEECCCCCTTCCCEEEEECTTCCCEEEESCEECBSS
T ss_pred ccceeeeeeEecccccccccccceeEEeeeeEEEEEecceecCCc
Confidence 753 22 1111 12234333 2344566666666664
No 12
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.70 E-value=7.1e-16 Score=154.44 Aligned_cols=223 Identities=11% Similarity=0.088 Sum_probs=146.5
Q ss_pred hHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEecceEEeCC-CCCCCcceEEEec
Q 013493 23 SSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRASD-TFPSDRHLIELWA 101 (442)
Q Consensus 23 sT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~~GTLkAp~-df~~d~~wI~f~~ 101 (442)
+|+|||+|++ ||+.. ||.+|++|+|+|+. ++ .++++-.+..+|+++++. .++ +..||.+..
T Consensus 7 ~t~aiq~ai~-~c~~~------------gg~~v~vP~G~~l~---l~-~l~~~~~l~~~g~~~~~~~~w~-~g~~i~~~~ 68 (349)
T 1hg8_A 7 EYSGLATAVS-SCKNI------------VLNGFQVPTGKQLD---LS-SLQNDSTVTFKGTTTFATTADN-DFNPIVISG 68 (349)
T ss_dssp SGGGHHHHHH-HCSEE------------EECCCEECTTCCEE---ET-TCCTTCEEEECSEEEECCCCCT-TCCSEEEEE
T ss_pred CHHHHHHHHH-hcccc------------CCCEEEECCCEEEE---ee-ccCCCeEEEEcCceeccccccc-CCceEEEEC
Confidence 4889999885 56421 34679999999974 21 234433335789988753 331 235899966
Q ss_pred CCCccccc--ceeeecccceeeecccCcccCccceeeeeeeEEE-e--c-ceEecceeEeccccEE--Eeee--------
Q 013493 102 PNSQKLKR--TDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLF-D--S-GFRGGGIFVIDSARIR--INNC-------- 165 (442)
Q Consensus 102 ~n~l~v~G--~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~-D--~-n~~~~GIt~~NSq~~~--I~Nc-------- 165 (442)
+.+++.| +|++||+|+.||.+.. .. .+.+..++-|.| . + +..+.||+++||++++ +.+|
T Consensus 69 -~ni~I~G~~~G~IdG~G~~ww~~~~-~~---~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~ 143 (349)
T 1hg8_A 69 -SNITITGASGHVIDGNGQAYWDGKG-SN---SNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGL 143 (349)
T ss_dssp -ESCEEEECTTCEEECCGGGTCCSCT-TC---TTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEE
T ss_pred -ccEEEEecCCCEEcCCcchhhhccc-cc---CCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEE
Confidence 7889999 7999999999997431 11 122111222334 2 4 8999999999998744 4444
Q ss_pred EEee----------------eccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEEeee
Q 013493 166 FFLH----------------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAA 228 (442)
Q Consensus 166 ~~~~----------------fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~~a~ 228 (442)
.+.. .||||||+.+|+.|.|++|+|. .||. +|.+. |.+-.|.|..+.++.
T Consensus 144 ~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~-----~gDD--------cIaiksg~nI~i~n~~~~~gh 210 (349)
T 1hg8_A 144 ILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVY-----NQDD--------CVAVTSGTNIVVSNMYCSGGH 210 (349)
T ss_dssp EEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEE-----CSSC--------SEEESSEEEEEEEEEEEESSC
T ss_pred EEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEe-----cCCC--------eEEeeCCeEEEEEeEEEeCCc
Confidence 3432 3699999999999999999997 2333 24444 333367777776554
Q ss_pred EeEEEcc----ceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeCC
Q 013493 229 IGVLLRG----QANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP 284 (442)
Q Consensus 229 ~Gv~~~g----q~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~dp 284 (442)
|+.++. ....+++|++.|+.-.--.-||.+|...-....+.|-+ |..|.|++.
T Consensus 211 -GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~--~~ni~~~~v 267 (349)
T 1hg8_A 211 -GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVT--YQNIALTNI 267 (349)
T ss_dssp -CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEE--EEEEEEEEE
T ss_pred -ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceE--EEEEEEEcc
Confidence 888843 23678888888876444456889997443445677665 456666664
No 13
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.70 E-value=1.9e-15 Score=150.58 Aligned_cols=283 Identities=13% Similarity=0.085 Sum_probs=166.5
Q ss_pred hHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEecceEEeC-CCCCCCcceEEEec
Q 013493 23 SSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRAS-DTFPSDRHLIELWA 101 (442)
Q Consensus 23 sT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~~GTLkAp-~df~~d~~wI~f~~ 101 (442)
+|+|||+|++ ||+.. ||.+|++|+|+|+. ++ .+.++-.+..+|+++++ ..+. ..||.+..
T Consensus 7 dt~aiq~ai~-~c~~~------------~g~~v~vP~G~~~~---l~-~l~~~~~l~~~g~~~~~~~~w~--g~~i~~~~ 67 (339)
T 2iq7_A 7 DAAAAIKGKA-SCTSI------------ILNGIVVPAGTTLD---MT-GLKSGTTVTFQGKTTFGYKEWE--GPLISFSG 67 (339)
T ss_dssp CHHHHHHHGG-GCSEE------------EEESCEECTTCCEE---EC-SCCTTCEEEEESEEEECCCCSC--CCSEEEEE
T ss_pred CHHHHHHHHH-Hhhcc------------CCCeEEECCCEEEE---ee-ccCCCeEEEEeCcEEccccccc--CcEEEEEc
Confidence 5999999985 56421 35679999999974 32 22222233578888875 2222 25898876
Q ss_pred CCCcccccc--eeeecccceeeecccCcccCccceeeeeee--EEEecceEecceeEecccc--EEEeeeEEeee-----
Q 013493 102 PNSQKLKRT--DAIKIDRNYVFNDVKDQTARTYYEDITFRD--VLFDSGFRGGGIFVIDSAR--IRINNCFFLHF----- 170 (442)
Q Consensus 102 ~n~l~v~G~--GtfDgqG~~~W~~~~c~~~~~~c~~iT~rn--l~~D~n~~~~GIt~~NSq~--~~I~Nc~~~~f----- 170 (442)
+.++++|. |++||+|+.||.+.. .. .|... ++- +.-..+..+.|++++||++ +++.+|....+
T Consensus 68 -~nv~I~G~~gG~IdG~G~~~w~~~~-~~---~~~~r-p~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I 141 (339)
T 2iq7_A 68 -TNININGASGHSIDCQGSRWWDSKG-SN---GGKTK-PKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVII 141 (339)
T ss_dssp -ESCEEEECTTCEEECCGGGTCCSCG-GG---SSSCC-CCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEE
T ss_pred -ccEEEEcCCCCEEECCccccccccc-cc---CCCCC-CeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEE
Confidence 77899996 899999999996421 11 12211 111 3234588999999999976 55555532222
Q ss_pred -----------ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEEeeeEeEEEcc---
Q 013493 171 -----------TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG--- 235 (442)
Q Consensus 171 -----------NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~~a~~Gv~~~g--- 235 (442)
||||||+.+++.|.|++|+|. .||. +|.+. |.+=.|.|..+.++. |+.++.
T Consensus 142 ~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~-----~gDD--------ciaiksg~nI~i~n~~~~~gh-GisiGSlg~ 207 (339)
T 2iq7_A 142 DNSAGDSAGGHNTDAFDVGSSTGVYISGANVK-----NQDD--------CLAINSGTNITFTGGTCSGGH-GLSIGSVGG 207 (339)
T ss_dssp ECGGGGGTTCCSCCSEEEESCEEEEEESCEEE-----CSSC--------SEEESSEEEEEEESCEEESSC-CEEEEEESS
T ss_pred ECCccccccCCCCCcEEEcCcceEEEEecEEe-----cCCC--------EEEEcCCccEEEEeEEEECCc-eEEECcCCc
Confidence 699999999999999999997 2333 24444 233366666766654 888733
Q ss_pred -ceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeCC--eEEEEEceEEeecceeEeeec-cceeee
Q 013493 236 -QANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP--VQVHVTNGFFLGDANIVLKSI-KGRISG 311 (442)
Q Consensus 236 -q~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~dp--~~~~i~~~~flgd~~i~l~~~-~~~~~g 311 (442)
....+++|++.|+.-.--.-||.+|...-....+.|-++ ..|.|++- +-+.|...+.-++.. -.+- ...+++
T Consensus 208 ~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~--~ni~~~~v~~~~i~i~~~y~~~~~~--~~p~~~~~i~n 283 (339)
T 2iq7_A 208 RSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTY--SGITLSNIAKYGIVIEQDYENGSPT--GTPTNGVPITG 283 (339)
T ss_dssp SSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEE--EEEEEEEESSEEEEEEEEEETTEEC--SCCCSSSCEEE
T ss_pred ccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEE--EeEEccCcccccEEEEeecCCCCCC--CCCCCCceEEE
Confidence 235677888777764333457888864333455666553 35555541 123333333221100 0111 246777
Q ss_pred eEEeeeeccCCCCCCccEEEecCCcceeeEEEEeccccc
Q 013493 312 LTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVN 350 (442)
Q Consensus 312 ~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~ 350 (442)
+.+-|=.-... .+. .-+.|.+.=..+..+.+++-...
T Consensus 284 i~~~ni~gt~~-~~~-~~~~i~c~~~~c~ni~~~nv~i~ 320 (339)
T 2iq7_A 284 LTLSKITGSVA-SSG-TNVYILCASGACSNWKWSGVSVT 320 (339)
T ss_dssp EEEEEEEEEEC-TTS-EEEEEECCTTCEEEEEEEEEEEE
T ss_pred EEEEeEEEEeC-CCC-EEEEEEeCCCcEecEEEEeEEEE
Confidence 76654333332 112 33566654334556666554433
No 14
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.69 E-value=3e-15 Score=150.85 Aligned_cols=283 Identities=13% Similarity=0.074 Sum_probs=170.2
Q ss_pred HHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEecceEEeC-CCCCCCcceEEEecC
Q 013493 24 SDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRAS-DTFPSDRHLIELWAP 102 (442)
Q Consensus 24 T~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~~GTLkAp-~df~~d~~wI~f~~~ 102 (442)
++|||+|+ +||+.. ||.+|++|+|+|+. +. .++++-.+..+|+++++ ..+.+ .||.+..
T Consensus 35 ~~aiq~ai-~~c~~~------------~g~~v~vP~G~~l~---l~-~l~~~~~l~~~g~~~~~~~~w~g--~~i~~~~- 94 (362)
T 1czf_A 35 AAAAKAGK-AKCSTI------------TLNNIEVPAGTTLD---LT-GLTSGTKVIFEGTTTFQYEEWAG--PLISMSG- 94 (362)
T ss_dssp HHHHHHHG-GGCSEE------------EEESCEECTTCCEE---EC-SCCTTCEEEEESEEEECCCCSCC--CSEEEEE-
T ss_pred HHHHHHHH-HHhhcc------------CCCEEEECCCEEEE---ee-ccCCCeEEEEeCcEEeccccCCC--cEEEEeC-
Confidence 78999887 556421 34679999999973 31 23443233578998885 33332 5999865
Q ss_pred CCccccc--ceeeecccceeeecccCcccCccceeeeeeeEEEecceEecceeEecccc--EEEe-------eeEEee--
Q 013493 103 NSQKLKR--TDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGIFVIDSAR--IRIN-------NCFFLH-- 169 (442)
Q Consensus 103 n~l~v~G--~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n~~~~GIt~~NSq~--~~I~-------Nc~~~~-- 169 (442)
+.+.++| +|++||+|+.||.+.. .. . ...+..+. +....+..+.||+++||++ +++. +|++..
T Consensus 95 ~nv~I~G~~~g~IdG~G~~~w~~~~-~~-~-~~rP~~i~-~~~~~nv~i~~iti~nsp~~~i~i~~~nv~i~~~~I~~~~ 170 (362)
T 1czf_A 95 EHITVTGASGHLINCDGARWWDGKG-TS-G-KKKPKFFY-AHGLDSSSITGLNIKNTPLMAFSVQANDITFTDVTINNAD 170 (362)
T ss_dssp ESCEEEECTTCEEECCGGGTCCSCT-TS-S-SCCCCCEE-EEEEETEEEESCEEECCSSCCEEEECSSEEEESCEEECGG
T ss_pred ccEEEEcCCCcEEECCCchhhcccC-CC-C-CCCCeEEE-EeecccEEEEEEEEecCCccEEEEeeCCEEEEEEEEECCc
Confidence 7789999 7999999999997421 11 0 11111122 3334588999999999866 4445 334442
Q ss_pred ------eccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEEeeeEeEEEcc----cee
Q 013493 170 ------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG----QAN 238 (442)
Q Consensus 170 ------fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~~a~~Gv~~~g----q~~ 238 (442)
-||||||+.+|++|.|+||+|. .||. +|.+. |.+-.|.|..+.++. |+.++. ...
T Consensus 171 ~d~~~~~NtDGidi~~s~nV~I~n~~i~-----~gDD--------cIaiksg~nI~i~n~~~~~gh-GisiGS~G~~~~~ 236 (362)
T 1czf_A 171 GDTQGGHNTDAFDVGNSVGVNIIKPWVH-----NQDD--------CLAVNSGENIWFTGGTCIGGH-GLSIGSVGDRSNN 236 (362)
T ss_dssp GGTTTCCSCCSEEECSCEEEEEESCEEE-----CSSC--------SEEESSEEEEEEESCEEESSC-CEEEEEECSSSCC
T ss_pred cccccCCCCCceeecCcceEEEEeeEEe-----cCCC--------EEEEeCCeEEEEEEEEEeCCc-eeEEeeccccCCC
Confidence 2799999999999999999998 2333 23343 233366666666554 787743 336
Q ss_pred EEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeCCe--EEEEEceEEeecceeEeeec-cceeeeeEEe
Q 013493 239 IVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDPV--QVHVTNGFFLGDANIVLKSI-KGRISGLTIV 315 (442)
Q Consensus 239 ~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~dp~--~~~i~~~~flgd~~i~l~~~-~~~~~g~~i~ 315 (442)
.+++|++.|+.-.--.-||.+|...-....+.|-++ ..|.|++.. -+.|...+--+ .---.+- ...++++.+-
T Consensus 237 ~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~--~ni~~~~v~~~~i~I~~~Y~~~--~~~~~p~~~~~i~nI~~~ 312 (362)
T 1czf_A 237 VVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITY--SNIVMSGISDYGVVIQQDYEDG--KPTGKPTNGVTIQDVKLE 312 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEE--EEEEEEEEEEEEEEEEEEEETT--EECSCCCSSEEEEEEEEE
T ss_pred CEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEE--EeEEEECcccccEEEEEecCCC--CCCCCCCCCceEEEEEEE
Confidence 789999988875444568899974334567777664 466666642 24444333221 1001111 2467776655
Q ss_pred eeeccCCCCCCccEEEecCCcceeeEEEEeccccc
Q 013493 316 ENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVN 350 (442)
Q Consensus 316 ~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~ 350 (442)
|=. |....+-.-+.|.+.=..+..+..++-...
T Consensus 313 ni~--gt~~~~~~~i~i~c~~~~c~ni~~~nv~i~ 345 (362)
T 1czf_A 313 SVT--GSVDSGATEIYLLCGSGSCSDWTWDDVKVT 345 (362)
T ss_dssp EEE--EEECTTSEEEEEECCTTTEEEEEEEEEEEE
T ss_pred EEE--EEecCCceEEEEEeCCCcCcCEEEEeEEEE
Confidence 322 332221233566654234566666655443
No 15
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.67 E-value=8.6e-15 Score=145.67 Aligned_cols=282 Identities=11% Similarity=0.073 Sum_probs=163.1
Q ss_pred hhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEecceEEeCC-CCCCCcceEEEe
Q 013493 22 ESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRASD-TFPSDRHLIELW 100 (442)
Q Consensus 22 DsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~~GTLkAp~-df~~d~~wI~f~ 100 (442)
.+|+|||+|++ ||+.. ||.+|++|+|+|+. |+ .+..+-.+..+|+++++. .+. ..||.+.
T Consensus 6 ~~t~aiq~ai~-~c~~~------------gg~~v~vP~G~~~~---l~-~l~~~~~l~~~g~~~~~~~~w~--g~li~~~ 66 (336)
T 1nhc_A 6 TSASEASESIS-SCSDV------------VLSSIEVPAGETLD---LS-DAADGSTITFEGTTSFGYKEWK--GPLIRFG 66 (336)
T ss_dssp SSHHHHHHHGG-GCSEE------------EEESCEECTTCCEE---CT-TCCTTCEEEEESEEEECCCCSC--CCSEECC
T ss_pred CCHHHHHHHHH-Hhhcc------------CCCeEEECCCEEEE---ee-ccCCCeEEEEeceEEccccccc--CcEEEEe
Confidence 45999999985 56431 35679999999973 21 222222335689988752 232 2588886
Q ss_pred cCCCcccccc--eeeecccceeeecccCcccCccceee--eeeeEEEecceEecceeEecccc--EEEeeeEEeee----
Q 013493 101 APNSQKLKRT--DAIKIDRNYVFNDVKDQTARTYYEDI--TFRDVLFDSGFRGGGIFVIDSAR--IRINNCFFLHF---- 170 (442)
Q Consensus 101 ~~n~l~v~G~--GtfDgqG~~~W~~~~c~~~~~~c~~i--T~rnl~~D~n~~~~GIt~~NSq~--~~I~Nc~~~~f---- 170 (442)
. +.++++|. |++||+|+.||.+.. .+ .|... .+. +....+..+.|++++||++ +++. |....+
T Consensus 67 ~-~nv~I~G~~gG~IdG~G~~~w~~~~-~~---~~~~rp~~i~-~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~ 139 (336)
T 1nhc_A 67 G-KDLTVTMADGAVIDGDGSRWWDSKG-TN---GGKTKPKFMY-IHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFT 139 (336)
T ss_dssp E-ESCEEEECTTCEEECCGGGTCCSCT-TT---SSSCCCCCEE-EEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCE
T ss_pred c-CCEEEEcCCCeEEECCccccccccC-cC---CCCCCceEEE-EeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEE
Confidence 5 77888985 799999999997431 11 12211 122 3334588999999999976 5566 633222
Q ss_pred ------------ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEEeeeEeEEEcc--
Q 013493 171 ------------TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG-- 235 (442)
Q Consensus 171 ------------NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~~a~~Gv~~~g-- 235 (442)
||||||+.+|+.|.|++|+|. .||. +|.+. |.+=.|.|..+.++. |+.++.
T Consensus 140 I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~-----~gDD--------ciaiksg~nI~i~n~~~~~gh-GisiGS~g 205 (336)
T 1nhc_A 140 IDNSDGDDNGGHNTDGFDISESTGVYISGATVK-----NQDD--------CIAINSGESISFTGGTCSGGH-GLSIGSVG 205 (336)
T ss_dssp EECTTHHHHTCCSCCSEEECSCEEEEEESCEEE-----SSSE--------EEEESSEEEEEEESCEEESSS-EEEEEEES
T ss_pred EECCCcccccCCCCCcEEecCCCeEEEEeCEEE-----cCCC--------EEEEeCCeEEEEEeEEEECCc-CceEccCc
Confidence 799999999999999999997 2332 34444 223356666666544 788743
Q ss_pred --ceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeCC--eEEEEEceEEeecceeEeeec-cceee
Q 013493 236 --QANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDP--VQVHVTNGFFLGDANIVLKSI-KGRIS 310 (442)
Q Consensus 236 --q~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~dp--~~~~i~~~~flgd~~i~l~~~-~~~~~ 310 (442)
....+++|++.|+.-.--..||.+|...-....+.|-++ ..|.|++. +-+.|...+ .+..---.+. ...++
T Consensus 206 ~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~v~nI~~--~ni~~~~v~~~~i~i~~~y--~~~~~~~~p~~~~~i~ 281 (336)
T 1nhc_A 206 GRDDNTVKNVTISDSTVSNSANGVRIKTIYKETGDVSEITY--SNIQLSGITDYGIVIEQDY--ENGSPTGTPSTGIPIT 281 (336)
T ss_dssp SSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEE--EEEEEEEESSEEEEEEEEE--ETTEECSCCCSSSCEE
T ss_pred cccCCCEEEEEEEeeEEECCCcEEEEEEECCCCCEEeeeEE--eeEEeeccccccEEEEeec--CCCCCCCCCCCCceEE
Confidence 225678888777754334457888864323345655543 35555553 123333322 2211000111 24566
Q ss_pred eeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccc
Q 013493 311 GLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNV 349 (442)
Q Consensus 311 g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~ 349 (442)
++++-|=.-+.. .+.. -+.|.+.=..+..+.+++-..
T Consensus 282 ~i~~~ni~gt~~-~~~~-~v~i~c~~~~c~ni~~~nv~i 318 (336)
T 1nhc_A 282 DVTVDGVTGTLE-DDAT-QVYILCGDGSCSDWTWSGVDL 318 (336)
T ss_dssp EEEEEEEEEEEC-TTCE-EEEEECCTTCEEEEEEEEEEE
T ss_pred EEEEEeEEEEeC-CCCE-EEEEEcCCCcEecEEEEeEEE
Confidence 666554332222 1122 356665433345555555433
No 16
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.65 E-value=7.2e-15 Score=146.68 Aligned_cols=277 Identities=11% Similarity=0.063 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceE-EecceEEeCC-CCCCCcceEEEec
Q 013493 24 SDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGGTLRASD-TFPSDRHLIELWA 101 (442)
Q Consensus 24 T~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~-i~~GTLkAp~-df~~d~~wI~f~~ 101 (442)
++|+|+ .+||+.. ||++|++|+|+|+. |.+ +.+++ ..+|+++|+. .+. ..||.+..
T Consensus 8 ~~aiq~--i~aC~~~------------gg~~v~vP~G~~l~---l~l---~~~~~l~~~g~~~~~~~~w~--~~~i~~~~ 65 (335)
T 1k5c_A 8 VDDAKD--IAGCSAV------------TLNGFTVPAGNTLV---LNP---DKGATVTMAGDITFAKTTLD--GPLFTIDG 65 (335)
T ss_dssp TTGGGG--CTTCSEE------------EECCEEECTTCCEE---ECC---CTTCEEEECSCEEECCCCSC--SCSEEEEE
T ss_pred HHHhHH--HHhcccC------------CCCEEEECCCEEEE---EEe---CCCeEEEEeccEeccccccc--CcEEEEEc
Confidence 678998 4778532 35679999999973 322 23343 5799999853 222 25999974
Q ss_pred CCCccccc-ceeeecccceeeecccCcccCccceeeeeeeEEEecceEecceeEecccc--EEEeeeEE-e---------
Q 013493 102 PNSQKLKR-TDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSGFRGGGIFVIDSAR--IRINNCFF-L--------- 168 (442)
Q Consensus 102 ~n~l~v~G-~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n~~~~GIt~~NSq~--~~I~Nc~~-~--------- 168 (442)
+.+.++| +|++||+|+.||.+.. .+ .....+..++ +.-.. ..+.||+++||++ +++.+|.. .
T Consensus 66 -~ni~I~G~~G~idG~G~~ww~~~~-~~-~~~~rP~~i~-~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~ 140 (335)
T 1k5c_A 66 -TGINFVGADHIFDGNGALYWDGKG-TN-NGTHKPHPFL-KIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDD 140 (335)
T ss_dssp -EEEEEECTTCEEECCGGGTCCSCT-TT-SSSCCCCCSE-EEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEEC
T ss_pred -cCEEEEeCccEEcCChhHhhhccc-cc-CCCCCCeEEE-EeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEEC
Confidence 7899999 6999999999996431 11 0011111122 33333 8999999999987 55666654 2
Q ss_pred --------eeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEEEeeeEeEEEccc--ee
Q 013493 169 --------HFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAAIGVLLRGQ--AN 238 (442)
Q Consensus 169 --------~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i~~a~~Gv~~~gq--~~ 238 (442)
.-||||||+ +|+.|.|+||+|. .||. ...|.- |.+=.|.|..+.++ -|+.++.. ..
T Consensus 141 ~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~-----~gDD------cIaiks-g~nI~i~n~~~~~g-hGisIGS~g~~~ 206 (335)
T 1k5c_A 141 FAGDTKNLGHNTDGFDV-SANNVTIQNCIVK-----NQDD------CIAIND-GNNIRFENNQCSGG-HGISIGSIATGK 206 (335)
T ss_dssp GGGGGGGCCCSCCSEEE-ECSSEEEESCEEE-----SSSC------SEEEEE-EEEEEEESCEEESS-CCEEEEEECTTC
T ss_pred CCCcccccCCCCCeEcc-cCCeEEEEeeEEE-----cCCC------EEEeeC-CeeEEEEEEEEECC-ccCeEeeccCCC
Confidence 237999999 9999999999998 3444 344443 22225666666654 47777533 57
Q ss_pred EEEEEEEeccccccceeeEEEeecccce-eeeeeeeecccceeeeCCe--EEEEEceEEeecceeEeeec-cceeeeeEE
Q 013493 239 IVTRVHCYNKATAFGGIGILVKLADAAL-TRIDNCYLDYTGIVLEDPV--QVHVTNGFFLGDANIVLKSI-KGRISGLTI 314 (442)
Q Consensus 239 ~~~gvh~~n~~t~~gg~gi~~~~~~~~~-~ri~ncyld~~~iv~~dp~--~~~i~~~~flgd~~i~l~~~-~~~~~g~~i 314 (442)
.+++|++.|+.-.----|+.+|...-.. ..+.|-+ |..|.|++.. -+.|+..+ ++.. -.+. ...++++++
T Consensus 207 ~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~--f~ni~~~~v~~~~i~i~~~Y--~~~~--~~p~~~~~i~nI~~ 280 (335)
T 1k5c_A 207 HVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVT--YDANTISGIAKYGVLISQSY--PDDV--GNPGTGAPFSDVNF 280 (335)
T ss_dssp EEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEE--EESCEEEEEEEEEEEEEEEE--TSSS--SSCCSSSCEEEEEE
T ss_pred CEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeE--EEEEEEEccccccEEEEeeC--CCCC--CCCCCCceEEEEEE
Confidence 8999999998755555688888643333 5677766 4466666642 23444333 3321 1111 246777666
Q ss_pred eeeeccCCCCCCccEEEecCCcceeeEEEEeccc
Q 013493 315 VENMFNGSPARNVPIIKLDGEFSNIDQVVIERNN 348 (442)
Q Consensus 315 ~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~ 348 (442)
-|=.-.|....+-.-+.|.+.= .+..+.+++-.
T Consensus 281 ~nI~~~Gt~~~~~~~i~i~c~~-~c~ni~~~nv~ 313 (335)
T 1k5c_A 281 TGGATTIKVNNAATRVTVECGN-CSGNWNWSQLT 313 (335)
T ss_dssp CSSCEEEEECTTCEEEEEECSS-EESEEEEEEEE
T ss_pred EEEEEeeEEcCCceEEEEECCC-cCCCEEEEeEE
Confidence 5433334422212335565431 45555555543
No 17
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.64 E-value=5.9e-15 Score=147.16 Aligned_cols=221 Identities=10% Similarity=0.052 Sum_probs=140.0
Q ss_pred hhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEEecceEEeC-CCCCCCcceEEEe
Q 013493 22 ESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVVQGGTLRAS-DTFPSDRHLIELW 100 (442)
Q Consensus 22 DsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i~~GTLkAp-~df~~d~~wI~f~ 100 (442)
+-++|||+|+ +||+.. ||.+|++|+|+|+. ++ .+..+-.+..+|+++++ ..+. ..||.+.
T Consensus 10 ~g~~aiq~ai-~~c~~~------------gg~~v~vP~G~~l~---l~-~l~~~~~l~~~g~~~~~~~~w~--g~li~~~ 70 (339)
T 1ia5_A 10 NGASSASKSK-TSCSTI------------VLSNVAVPSGTTLD---LT-KLNDGTHVIFSGETTFGYKEWS--GPLISVS 70 (339)
T ss_dssp GHHHHHHHHG-GGCSEE------------EEESCEECTTCCEE---EC-SCCTTCEEEEESEEEECCCCSC--CCSEEEE
T ss_pred cchHHHHHHH-HHhhcc------------CCCeEEECCCEEEE---ee-ccCCCeEEEEeCcEEccccccc--CcEEEEE
Confidence 3478999988 456431 35679999999974 32 12122223578998885 2332 2589987
Q ss_pred cCCCcccccc--eeeecccceeeecccCcccCccceeeeeee--EEEecceEecceeEecccc--EEEeee--------E
Q 013493 101 APNSQKLKRT--DAIKIDRNYVFNDVKDQTARTYYEDITFRD--VLFDSGFRGGGIFVIDSAR--IRINNC--------F 166 (442)
Q Consensus 101 ~~n~l~v~G~--GtfDgqG~~~W~~~~c~~~~~~c~~iT~rn--l~~D~n~~~~GIt~~NSq~--~~I~Nc--------~ 166 (442)
. +.++++|. |++||+|+.||.+.. .. .|... ++- +.-..+..+.|++++||++ +++.+| +
T Consensus 71 ~-~nv~I~G~~gG~IdG~G~~~w~~~~-~~---~~~~r-p~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~ 144 (339)
T 1ia5_A 71 G-SDLTITGASGHSINGDGSRWWDGEG-GN---GGKTK-PKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDIT 144 (339)
T ss_dssp E-ESCEEEECTTCEEECCGGGTCSSCT-TT---SSSCC-CCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCE
T ss_pred c-CcEEEEcCCCeEEeCCCCccccccc-cC---CCCCC-CeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEE
Confidence 6 77899996 799999999997431 11 12211 111 3334588999999999976 445555 3
Q ss_pred Eee--------eccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEEeeeEeEEEcc--
Q 013493 167 FLH--------FTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIFSAAIGVLLRG-- 235 (442)
Q Consensus 167 ~~~--------fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~~a~~Gv~~~g-- 235 (442)
+.. -||||||+.+++.|.|++|+|. .||. + |.+. |.+-.|.|..+.++. |+.++.
T Consensus 145 I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~-----~gDD------c--Iaiksg~nI~i~n~~~~~gh-GisiGS~g 210 (339)
T 1ia5_A 145 IDNSDGDDNGGHNTDAFDIGTSTYVTISGATVY-----NQDD------C--VAVNSGENIYFSGGYCSGGH-GLSIGSVG 210 (339)
T ss_dssp EECGGGTTTTCCSCCSEEEESCEEEEEESCEEE-----CSSC------S--EEESSEEEEEEESCEEESSS-CEEEEEEC
T ss_pred EECCccccccCCCCCcEEecCCceEEEEeeEEE-----cCCC------e--EEEeCCeEEEEEeEEEECCc-eEEECcCC
Confidence 332 2699999999999999999997 2333 2 3333 233356666666544 787733
Q ss_pred --ceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeC
Q 013493 236 --QANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLED 283 (442)
Q Consensus 236 --q~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~d 283 (442)
....+++|++.|+.-.--.-||.+|...-....+.|-++ ..|.|++
T Consensus 211 ~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~--~ni~~~~ 258 (339)
T 1ia5_A 211 GRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTY--KDITLTS 258 (339)
T ss_dssp SSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEE--EEEEEEE
T ss_pred cccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEE--EEEEEEC
Confidence 235688888887764444568888863323445666553 3454543
No 18
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.51 E-value=5.4e-15 Score=156.57 Aligned_cols=216 Identities=14% Similarity=0.166 Sum_probs=143.0
Q ss_pred eeeecccCCCCCCCchhHHHHHHHHHHhhccCC--Ccc-------c----ccccccCCceEEEecCceEEE--eceEEeC
Q 013493 7 VFYPIGYGADPTGANESSDAILQALNDAFNVQS--GLE-------L----LPGVKDLGGVIIDFQGGNYKI--SKPIRFP 71 (442)
Q Consensus 7 vfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~--~st-------~----~~G~~~lGga~V~lPgGtYlI--s~pI~f~ 71 (442)
.||...|||++||++|.++||. +|+++|.... +.. + .|-+...||++|++|+|+|++ +++|.++
T Consensus 142 ~~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~ 220 (549)
T 1x0c_A 142 EFDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLS 220 (549)
T ss_dssp EEGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEEC
T ss_pred EECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEec
Confidence 6777899999999999999999 9999887622 221 1 111223578999999999996 4688888
Q ss_pred CCCcc-eEEecc-eEEeCCCCCCCcceEEEe-cCCCcccccceeeecccceeeecccCcccCccceee----ee---eeE
Q 013493 72 PGVGN-VVVQGG-TLRASDTFPSDRHLIELW-APNSQKLKRTDAIKIDRNYVFNDVKDQTARTYYEDI----TF---RDV 141 (442)
Q Consensus 72 pc~gn-i~i~~G-TLkAp~df~~d~~wI~f~-~~n~l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~i----T~---rnl 141 (442)
+.. . +.+.+| .|++ ++.+. ..+.+++.|.|++||+|..||.... ......|+.. .+ ..+
T Consensus 221 s~~-~~L~l~~GA~L~g---------s~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~-~~~~~~~~~rp~~i~~~~~~~~ 289 (549)
T 1x0c_A 221 SSV-TWVYFAPGAYVKG---------AVEFLSTASEVKASGHGVLSGEQYVWYADPD-EGYQKASGANNNGLRMWRGTLG 289 (549)
T ss_dssp TTC-CEEEECTTEEEES---------CEEECCCSSEEEEESSCEEECTTSCTTEEGG-GTTEECGGGCSCCCCSEEEECC
T ss_pred CCC-CeEecCCCCEEEE---------EEEEecCceeEEEEeeEEEECCCceecccCc-ccccccccCCCceEEEeecccc
Confidence 653 3 334445 3444 34555 6788999999999999999886321 1100122221 11 111
Q ss_pred EEecceEecceeEecccc--EEEe-ee------EEeee--------ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcC
Q 013493 142 LFDSGFRGGGIFVIDSAR--IRIN-NC------FFLHF--------TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKG 204 (442)
Q Consensus 142 ~~D~n~~~~GIt~~NSq~--~~I~-Nc------~~~~f--------NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~ 204 (442)
....|+.+.|++++||++ +||. +| .+.++ |||||++. +.|.|+||+|.. ||.
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~-----gDD---- 358 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT-----DDD---- 358 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE-----SSC----
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC-----CCC----
Confidence 233488999999999977 4432 23 33333 79999999 999999999992 322
Q ss_pred cceEEEEecCCCceeeEEEEEeee-Ee-EEEccceeEEEEEEEeccc
Q 013493 205 FSGTAIDLASNDNAITDVTIFSAA-IG-VLLRGQANIVTRVHCYNKA 249 (442)
Q Consensus 205 ~~gtgI~l~gnd~~itDv~i~~a~-~G-v~~~gq~~~~~gvh~~n~~ 249 (442)
+|.+.+.+=.|.|..+.++- -| |.++.....+++|++.|+.
T Consensus 359 ----cIaIks~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~ 401 (549)
T 1x0c_A 359 ----GLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVD 401 (549)
T ss_dssp ----CEECCSSSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEE
T ss_pred ----EEEECCCCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeE
Confidence 34444533367777777532 23 6666556667777777764
No 19
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.50 E-value=3.5e-13 Score=143.57 Aligned_cols=179 Identities=11% Similarity=0.080 Sum_probs=124.9
Q ss_pred cCCceEEEecCceEEEeceEEeC-CCCcceEEecceEEeCCCCC-C----C---cceEEEecCCCcccccceeeecccce
Q 013493 49 DLGGVIIDFQGGNYKISKPIRFP-PGVGNVVVQGGTLRASDTFP-S----D---RHLIELWAPNSQKLKRTDAIKIDRNY 119 (442)
Q Consensus 49 ~lGga~V~lPgGtYlIs~pI~f~-pc~gni~i~~GTLkAp~df~-~----d---~~wI~f~~~n~l~v~G~GtfDgqG~~ 119 (442)
..||++||+|+|+|++ +|+.|. ||+ ...|+|+++++.. - . ..||.+.....+.++|.|++||+|..
T Consensus 228 ~~ggg~v~vP~G~yl~-~~~~~~gpc~----~g~G~i~lkSnvt~L~L~~GA~l~g~i~~~~~~nv~ItG~GtIDG~G~~ 302 (574)
T 1ogo_X 228 WGAKSILYFPPGVYWM-NQDQSGNSGK----LGSNHIRLNSNTYWVYLAPGAYVKGAIEYFTKQNFYATGHGILSGENYV 302 (574)
T ss_dssp TCSSSEEEECSEEEEE-CBCTTCCBSC----SSSCCEECCTTCCEEEECTTEEEESCEEECCSSCEEEESSCEEECTTSC
T ss_pred cCCCCEEEECCcEEEE-eccccCCccc----ccceEEEecCCCceEEecCCcEEEccEEEeCceeEEEEeCEEEeCCCcc
Confidence 3578999999999998 799999 996 3456677776554 1 1 24788999999999999999999999
Q ss_pred eeecccCcccCccceee--eee-----eEEEecceEecceeEecccc--EEEeeeEEe-----ee--------ccccEEE
Q 013493 120 VFNDVKDQTARTYYEDI--TFR-----DVLFDSGFRGGGIFVIDSAR--IRINNCFFL-----HF--------TTQGILV 177 (442)
Q Consensus 120 ~W~~~~c~~~~~~c~~i--T~r-----nl~~D~n~~~~GIt~~NSq~--~~I~Nc~~~-----~f--------NTDGIhI 177 (442)
||.. .|.. -..|... .++ .+....|+.+.||+++||++ +|+.+|... ++ ||||||+
T Consensus 303 ww~~-~~~~-~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi 380 (574)
T 1ogo_X 303 YQAN-AGDN-YIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEI 380 (574)
T ss_dssp TTCB-TTTT-TBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBC
T ss_pred cccc-cccc-cccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCccCcc
Confidence 9863 1221 1123211 111 12234689999999999977 445555222 22 6999999
Q ss_pred eeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEEEeee-Ee-EEEccceeEEEEEEEeccc
Q 013493 178 QRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAA-IG-VLLRGQANIVTRVHCYNKA 249 (442)
Q Consensus 178 ~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i~~a~-~G-v~~~gq~~~~~gvh~~n~~ 249 (442)
. +.|.|++|+|. .||. +|.+.+.+=.|.|..+.++- -| |.++.....+++|++.|+.
T Consensus 381 ~--~NV~I~nc~I~-----~gDD--------cIaIks~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~ 439 (574)
T 1ogo_X 381 Y--PNSVVHDVFWH-----VNDD--------AIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLN 439 (574)
T ss_dssp C--TTCEEEEEEEE-----ESSC--------SEECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEE
T ss_pred c--CCEEEEeeEEE-----CCCC--------EEEECCccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEE
Confidence 9 99999999999 2333 34444544488888888653 23 6776666678888877774
No 20
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.00 E-value=3.2e-09 Score=109.22 Aligned_cols=65 Identities=15% Similarity=0.242 Sum_probs=52.0
Q ss_pred CCCCCeeeeeccc----CCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeC
Q 013493 1 MLQNGRVFYPIGY----GADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFP 71 (442)
Q Consensus 1 ~~~~~rvfNV~dY----GAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~ 71 (442)
||++...|||++| +|++||.+|.+++|+++|++.-+.+......| |.+|+||+|+|.+.+|+...
T Consensus 8 ~~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~p------GdvI~L~~G~Y~l~g~ivId 76 (410)
T 2inu_A 8 PLNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARP------GAAIIIPPGDYDLHTQVVVD 76 (410)
T ss_dssp ----CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCC------CEEEECCSEEEEECSCEEEC
T ss_pred ccccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCC------CCEEEECCCeeccCCcEEEe
Confidence 7899999999999 89999999999999999999876655555556 48999999999865666665
No 21
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.77 E-value=3.1e-09 Score=116.11 Aligned_cols=68 Identities=22% Similarity=0.363 Sum_probs=54.4
Q ss_pred CCeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEE--ec
Q 013493 4 NGRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVV--QG 81 (442)
Q Consensus 4 ~~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i--~~ 81 (442)
..+.+||+||||++||++|+|+|||+||++|. +|.+||+|+|+|+|+++|.+||+. .+ + .-
T Consensus 397 ~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa~---------------~g~~v~~P~G~Y~vt~Ti~ip~~~-~i-vG~~~ 459 (758)
T 3eqn_A 397 PSDFVSVRSQGAKGDGHTDDTQAIKNVFAKYA---------------GCKIIFFDAGTYIVTDTIQIPAGT-QI-VGEVW 459 (758)
T ss_dssp GGGEEETTTTTCCCEEEEECHHHHHHHHHHHT---------------TTSEEECCSEEEEESSCEEECTTC-EE-ECCSS
T ss_pred ccceEEeeeccccCCCCchhHHHHHHHHHHhc---------------CCCEEEECCCEeEECCeEEcCCCC-EE-Eeccc
Confidence 34599999999999999999999999999663 235799999999999999999763 12 2 22
Q ss_pred ceEEeCC
Q 013493 82 GTLRASD 88 (442)
Q Consensus 82 GTLkAp~ 88 (442)
.+|.+.-
T Consensus 460 ~~I~~~G 466 (758)
T 3eqn_A 460 SVIMGTG 466 (758)
T ss_dssp EEEEECS
T ss_pred ceEecCC
Confidence 4677753
No 22
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.51 E-value=0.0028 Score=64.80 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=52.1
Q ss_pred ceeEeccccEEEeeeEEeeeccccEEEeeee-eEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEEE-ee
Q 013493 151 GIFVIDSARIRINNCFFLHFTTQGILVQRGH-ETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTIF-SA 227 (442)
Q Consensus 151 GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~-~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i~-~a 227 (442)
||.+. +....|.+|.+.+....||+++.+. ...|.+|.|-...... ..+++ -.|.++.+. +.++.+.+-.+. -.
T Consensus 131 GI~v~-gs~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~-~~g~~-~dG~~~~~~~g~Gn~~~~~~~~~N~ 207 (400)
T 1ru4_A 131 GAYVI-GSHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPK-KNGSM-ADGFGPKQKQGPGNRFVGCRAWENS 207 (400)
T ss_dssp SEEEC-SSSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTT-TTTSS-CCSEEECTTCCSCCEEESCEEESCS
T ss_pred cEEEe-CCCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCcc-ccCcc-cceEEEEecccCCeEEECCEEeecC
Confidence 66544 3456689999988777799999854 7888899886433211 01122 124444444 445555444333 22
Q ss_pred eEeEEEcc--ceeEEEEEEEecc
Q 013493 228 AIGVLLRG--QANIVTRVHCYNK 248 (442)
Q Consensus 228 ~~Gv~~~g--q~~~~~gvh~~n~ 248 (442)
..|+-+-+ ...++++..+|+-
T Consensus 208 ddGidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 208 DDGFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp SCSEECTTCCSCCEEESCEEEST
T ss_pred CCcEEEEecCCCEEEEeEEEECC
Confidence 34555522 2235666555544
No 23
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.06 E-value=0.0081 Score=58.98 Aligned_cols=180 Identities=16% Similarity=0.102 Sum_probs=96.1
Q ss_pred EecceeEeccccEEEeeeEEeeeccccEEEee-eeeEEEeeeeeeeccccCCCCCCcCcceEEEE-------ecCCCcee
Q 013493 148 RGGGIFVIDSARIRINNCFFLHFTTQGILVQR-GHETFISSCFLGQRSTVGGDPGEKGFSGTAID-------LASNDNAI 219 (442)
Q Consensus 148 ~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~-S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~-------l~gnd~~i 219 (442)
...||.+-.|....|.+|...+-++||||+.. |+.+.|+++.+..... +..+- +.+.+..|
T Consensus 171 ~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~-----------g~~~~~~g~~~~~~s~nv~i 239 (377)
T 2pyg_A 171 GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGS-----------SGLVVQRGLEDLALPSNILI 239 (377)
T ss_dssp SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSS-----------CSEEEECCSSCCCCCEEEEE
T ss_pred CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccC-----------ceEEEeccccCCCCCccEEE
Confidence 34678888888888999988888999999888 9999999999984110 11121 22222334
Q ss_pred eEEEEEe-eeEeEEEcc-ceeEEEEEEEeccccccceeeEEEeecccceeeeeeeeecccceeeeCCeEEEEEceEEeec
Q 013493 220 TDVTIFS-AAIGVLLRG-QANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYLDYTGIVLEDPVQVHVTNGFFLGD 297 (442)
Q Consensus 220 tDv~i~~-a~~Gv~~~g-q~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyld~~~iv~~dp~~~~i~~~~flgd 297 (442)
.+-.+.+ ...|+.+.. +..++++.++++. .+.||+++ +....+|.|--+..+.....-| .+.+.+ +-+.
T Consensus 240 ~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~----~~~GI~i~--g~~~~~i~~N~i~~n~~~~~~~-~v~~~~--~~~~ 310 (377)
T 2pyg_A 240 DGGAYYDNAREGVLLKMTSDITLQNADIHGN----GSSGVRVY--GAQDVQILDNQIHDNAQAAAVP-EVLLQS--FDDT 310 (377)
T ss_dssp ESCEEESCSSCSEEEEEEEEEEEESCEEESC----SSCSEEEE--EEEEEEEESCEEESCCSSSSCC-SEEEEC--EEET
T ss_pred ECCEEEcCccCceEeccccCeEEECCEEECC----CCceEEEe--cCCCcEEECcEEECCccccccc-ceEEEE--ecCC
Confidence 4434443 355666533 2234455555544 24567766 3444445444444332211001 111111 2222
Q ss_pred ceeEeeeccceeeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccccce
Q 013493 298 ANIVLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGM 352 (442)
Q Consensus 298 ~~i~l~~~~~~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm 352 (442)
+.++. ..-.-+...|-+|.|.|..... .-+.+.+ ...+.+.|..|...|-
T Consensus 311 ~~~~~--~~~~~~~~~i~~N~i~g~~~~~-~~i~~~~--~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 311 AGASG--TYYTTLNTRIEGNTISGSANST-YGIQERN--DGTDYSSLIDNDIAGV 360 (377)
T ss_dssp TSSSC--EEECCBCCEEESCEEECCSSCC-EEEEECS--SSCBCCEEESCEEESS
T ss_pred Cccce--eeeeccCeEEECCEEECcCCCc-cceEEcc--CCCccEEEECcEEeCC
Confidence 22100 0001367788888888853333 2344444 4556777777766554
No 24
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.71 E-value=0.041 Score=58.01 Aligned_cols=93 Identities=16% Similarity=0.264 Sum_probs=51.7
Q ss_pred cccEEEeeeEEeeeccc--------cEEEee-------eeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-----CCC
Q 013493 157 SARIRINNCFFLHFTTQ--------GILVQR-------GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-----SND 216 (442)
Q Consensus 157 Sq~~~I~Nc~~~~fNTD--------GIhI~~-------S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-----gnd 216 (442)
+..-.|.+|+|.+-..- ||++.. ++...|.++.|+.+. .++.. +-+|.+. .++
T Consensus 157 g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~-~~~N~------~e~iR~G~h~m~s~~ 229 (506)
T 1dbg_A 157 PQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQ-KPGNA------GGGIRIGYYRNDIGR 229 (506)
T ss_dssp CCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECC-CSSSC------CCSEEECSSTTCBCC
T ss_pred ccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccc-cCCCc------cccEEEEEEecccCC
Confidence 33445888888774222 555554 367888888888765 32222 2234433 455
Q ss_pred ceeeEEEEEeeeE--eEEE-ccceeEEEEEEEeccccccceeeEEEee
Q 013493 217 NAITDVTIFSAAI--GVLL-RGQANIVTRVHCYNKATAFGGIGILVKL 261 (442)
Q Consensus 217 ~~itDv~i~~a~~--Gv~~-~gq~~~~~gvh~~n~~t~~gg~gi~~~~ 261 (442)
+.|.+=.|..... .++. ....+++++=+++++. | ||+|+.
T Consensus 230 ~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~~---g--gi~l~~ 272 (506)
T 1dbg_A 230 CLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQ---G--TMNFRH 272 (506)
T ss_dssp CEEESCEEEEECSSSEEEEEESBSCEEESCEEESCS---S--EEEEEE
T ss_pred cEEECCEEEeccCcEEEEEEecCCEEEECCEEEccc---C--cEEEee
Confidence 6666655553222 2333 3335778888888763 2 366663
No 25
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=96.32 E-value=0.3 Score=48.71 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=74.6
Q ss_pred cceeeeeeeEEEecc---------------eEecceeEeccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeecccc
Q 013493 132 YYEDITFRDVLFDSG---------------FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTV 196 (442)
Q Consensus 132 ~c~~iT~rnl~~D~n---------------~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~ 196 (442)
.|..++++++.++.. -.-.||.+..|+.+.|.||++. -..|+|.+.+++.+.|+++++.
T Consensus 134 ~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~-~gDDcIaiksg~nI~i~n~~~~----- 207 (349)
T 1hg8_A 134 GSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVY-NQDDCVAVTSGTNIVVSNMYCS----- 207 (349)
T ss_dssp SCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEE-CSSCSEEESSEEEEEEEEEEEE-----
T ss_pred ccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEe-cCCCeEEeeCCeEEEEEeEEEe-----
Confidence 577888888888763 2366898888999999999885 5889999999999999999998
Q ss_pred CCCCCCcCcceEEEEecC----CCc-----eeeEEEEEeeeEeEEEc---cceeEEEEEEEeccc
Q 013493 197 GGDPGEKGFSGTAIDLAS----NDN-----AITDVTIFSAAIGVLLR---GQANIVTRVHCYNKA 249 (442)
Q Consensus 197 gg~~~e~~~~gtgI~l~g----nd~-----~itDv~i~~a~~Gv~~~---gq~~~~~gvh~~n~~ 249 (442)
+ |-||.+.+ .+. .|.|..|....-|+.+. +..-.+++|++-|..
T Consensus 208 ---~------ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~ 263 (349)
T 1hg8_A 208 ---G------GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIA 263 (349)
T ss_dssp ---S------SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEE
T ss_pred ---C------CcceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEE
Confidence 1 22566632 223 45555666666777763 223457788777764
No 26
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=95.94 E-value=0.078 Score=53.27 Aligned_cols=102 Identities=20% Similarity=0.272 Sum_probs=73.2
Q ss_pred ceeeeeeeEEEecc-------eEecceeEeccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCc
Q 013493 133 YEDITFRDVLFDSG-------FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGF 205 (442)
Q Consensus 133 c~~iT~rnl~~D~n-------~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~ 205 (442)
|..++++++.++.. -.-.|+.+-.|+.+.|.||++. -..|+|.+.+++.+.|+|+.+. +
T Consensus 156 ~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~-~gDDcIaiksg~nI~i~n~~~~--------~----- 221 (362)
T 1czf_A 156 ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVH-NQDDCLAVNSGENIWFTGGTCI--------G----- 221 (362)
T ss_dssp CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEE-CSSCSEEESSEEEEEEESCEEE--------S-----
T ss_pred eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEe-cCCCEEEEeCCeEEEEEEEEEe--------C-----
Confidence 77777888877763 2467888888888999999874 5789999999999999999999 1
Q ss_pred ceEEEEecC----CCc-----eeeEEEEEeeeEeEEEc---cceeEEEEEEEeccc
Q 013493 206 SGTAIDLAS----NDN-----AITDVTIFSAAIGVLLR---GQANIVTRVHCYNKA 249 (442)
Q Consensus 206 ~gtgI~l~g----nd~-----~itDv~i~~a~~Gv~~~---gq~~~~~gvh~~n~~ 249 (442)
|-||.+.+ .++ .+.|..+.....|+.+. |..-.+++|++-|..
T Consensus 222 -ghGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~ 276 (362)
T 1czf_A 222 -GHGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIV 276 (362)
T ss_dssp -SCCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEE
T ss_pred -CceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEE
Confidence 12455532 224 45555556666777762 223468888888765
No 27
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=95.85 E-value=0.077 Score=53.30 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=35.8
Q ss_pred EecceeEeccccEEEeeeEEeeeccccE-EE-eeeeeEEEeeeeeeec
Q 013493 148 RGGGIFVIDSARIRINNCFFLHFTTQGI-LV-QRGHETFISSCFLGQR 193 (442)
Q Consensus 148 ~~~GIt~~NSq~~~I~Nc~~~~fNTDGI-hI-~~S~~V~I~nS~Igq~ 193 (442)
...+|.+..|+.+.|+.|.+.. ..||+ .+ ..++.++|++|.|.+|
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~-~~Dg~id~~~~s~~vTISnn~f~~H 195 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSD-CSDGLIDVTLGSTGITISNNHFFNH 195 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEEC-CSSEEEEEESSCEEEEEESCEEESE
T ss_pred CCCEEEEecCceEEEEeeEEec-CCCCcEeeccCcceEEEEeeEEecC
Confidence 4567888888888899998865 57887 45 6789999999999855
No 28
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.76 E-value=0.49 Score=47.06 Aligned_cols=128 Identities=16% Similarity=0.291 Sum_probs=70.3
Q ss_pred HHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEE-ecceEEeCCCCCCCcceEEEecCC
Q 013493 25 DAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVV-QGGTLRASDTFPSDRHLIELWAPN 103 (442)
Q Consensus 25 ~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i-~~GTLkAp~df~~d~~wI~f~~~n 103 (442)
+-||+|+++|-.... ...+|+|++|+|. .+|..+..+.+|++ .+| .+...|......
T Consensus 20 ~TIq~AI~aap~~~~-----------~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g---------~~~tiI~~~~~~ 77 (319)
T 1gq8_A 20 KTVSEAVAAAPEDSK-----------TRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDG---------RTSTIITASKNV 77 (319)
T ss_dssp SSHHHHHHHSCSSCS-----------SCEEEEECSEEEE--CCEEECTTCCSEEEEESC---------TTTEEEEECCCT
T ss_pred cCHHHHHHhccccCC-----------ceEEEEEcCCeEe--eeeeccCCCccEEEEEcC---------CCccEEEecccc
Confidence 349999988743321 1268999999996 57888755556754 222 011233333210
Q ss_pred CcccccceeeecccceeeecccCcccCccceeeeeeeEEEecc-----eEecceeEeccccEEEeeeEEeeeccccEEEe
Q 013493 104 SQKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSG-----FRGGGIFVIDSARIRINNCFFLHFTTQGILVQ 178 (442)
Q Consensus 104 ~l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n-----~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~ 178 (442)
..+.+++.. ...+ ......++++|.|-.. ...-+|.+ .+.+..|.||.|.+. -|++.++
T Consensus 78 ---~~g~~t~~s--atv~---------v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~ 141 (319)
T 1gq8_A 78 ---QDGSTTFNS--ATVA---------AVGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAY-QDSLYVH 141 (319)
T ss_dssp ---TTTCCTGGG--CSEE---------ECSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECS-TTCEEEC
T ss_pred ---cCCCCccce--EEEE---------EECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECcc-ceeeeec
Confidence 011111110 0000 0111223444444332 12334443 466677999999876 6789998
Q ss_pred eeeeEEEeeeeee
Q 013493 179 RGHETFISSCFLG 191 (442)
Q Consensus 179 ~S~~V~I~nS~Ig 191 (442)
.+.. ++++|.|.
T Consensus 142 ~~r~-~~~~c~I~ 153 (319)
T 1gq8_A 142 SNRQ-FFINCFIA 153 (319)
T ss_dssp SSEE-EEESCEEE
T ss_pred CccE-EEEecEEE
Confidence 8764 99999998
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=95.65 E-value=0.073 Score=52.95 Aligned_cols=103 Identities=16% Similarity=0.256 Sum_probs=74.2
Q ss_pred cccee-eeeeeEEEecc--------eEecceeEeccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCC
Q 013493 131 TYYED-ITFRDVLFDSG--------FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPG 201 (442)
Q Consensus 131 ~~c~~-iT~rnl~~D~n--------~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~ 201 (442)
..|.. ++++++.++.. -.-.|+.+ .|+.+.|.||++. -..|.|.+.+++.|.|+||.+. +
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~-~gDDcIaiksg~nI~i~n~~~~--------~- 193 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVK-NQDDCIAINDGNNIRFENNQCS--------G- 193 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEE-SSSCSEEEEEEEEEEEESCEEE--------S-
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEE-cCCCEEEeeCCeeEEEEEEEEE--------C-
Confidence 36777 88888888773 23568888 8899999999884 4789999999999999999999 2
Q ss_pred CcCcceEEEEec--CCCceeeEEE-----EEeeeEeEEEc---cce-eEEEEEEEeccc
Q 013493 202 EKGFSGTAIDLA--SNDNAITDVT-----IFSAAIGVLLR---GQA-NIVTRVHCYNKA 249 (442)
Q Consensus 202 e~~~~gtgI~l~--gnd~~itDv~-----i~~a~~Gv~~~---gq~-~~~~gvh~~n~~ 249 (442)
|-||.+. +.++.|.|+. +.+..-|+.+. +.. -.+++|++-|..
T Consensus 194 -----ghGisIGS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~ 247 (335)
T 1k5c_A 194 -----GHGISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANT 247 (335)
T ss_dssp -----SCCEEEEEECTTCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCE
T ss_pred -----CccCeEeeccCCCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEE
Confidence 1246664 3245555555 45566666663 222 468888888875
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=95.59 E-value=0.64 Score=49.78 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=86.0
Q ss_pred ceE-EEecCceEEEeceEEeCCCCcceEE-ecceEEeCC-CC--------CC---CcceEEEe------cCCCcccccce
Q 013493 52 GVI-IDFQGGNYKISKPIRFPPGVGNVVV-QGGTLRASD-TF--------PS---DRHLIELW------APNSQKLKRTD 111 (442)
Q Consensus 52 ga~-V~lPgGtYlIs~pI~f~pc~gni~i-~~GTLkAp~-df--------~~---d~~wI~f~------~~n~l~v~G~G 111 (442)
+.. ++|++|.++. ++|.|.-+. ++.+ ..|+|.... .| +. ....|.|. ......++|-.
T Consensus 264 nvt~L~L~~GA~l~-g~i~~~~~~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Git 341 (574)
T 1ogo_X 264 NTYWVYLAPGAYVK-GAIEYFTKQ-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPT 341 (574)
T ss_dssp TCCEEEECTTEEEE-SCEEECCSS-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCE
T ss_pred CCceEEecCCcEEE-ccEEEeCce-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeE
Confidence 356 8999999987 788888654 6665 557886542 11 00 01122332 33334444333
Q ss_pred eeecccceeeecccCcccCccceee--eeeeEEEecc-e-EecceeEeccccEEEeeeEEeeeccccEEEeeeeeEEEee
Q 013493 112 AIKIDRNYVFNDVKDQTARTYYEDI--TFRDVLFDSG-F-RGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISS 187 (442)
Q Consensus 112 tfDgqG~~~W~~~~c~~~~~~c~~i--T~rnl~~D~n-~-~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~n 187 (442)
..+. ..|.-. -..|..+ +++++..+.. . .-.||.+- +.+.|.||++ .-..|.|.+.+ +.|.|+|
T Consensus 342 i~NS---p~w~i~-----~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I-~~gDDcIaIks-~NI~I~n 409 (574)
T 1ogo_X 342 INAP---PFNTMD-----FNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFW-HVNDDAIKIYY-SGASVSR 409 (574)
T ss_dssp EECC---SSCSEE-----ECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEE-EESSCSEECCS-TTCEEEE
T ss_pred EECC---CCcEEe-----ecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEE-ECCCCEEEECC-ccEEEEe
Confidence 3331 223100 1246666 7777755531 1 15566665 7799999987 45799999987 9999999
Q ss_pred eeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEE
Q 013493 188 CFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTI 224 (442)
Q Consensus 188 S~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i 224 (442)
|.+... + .|-+|.+.+..+.|.|+.|
T Consensus 410 c~i~~g------~-----g~g~IsIGS~~g~V~NV~v 435 (574)
T 1ogo_X 410 ATIWKC------H-----NDPIIQMGWTSRDISGVTI 435 (574)
T ss_dssp EEEEEC------S-----SSCSEECCSSCCCEEEEEE
T ss_pred EEEECC------C-----CCceEEEcCCCCcEEEEEE
Confidence 998621 1 1222666654556666644
No 31
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=95.59 E-value=0.072 Score=53.32 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=70.4
Q ss_pred cceeeeeeeEEEecc---eEecceeEeccccEEEeeeEEeeeccccEEEe------eeeeEEEeeeeeeeccccCCCCCC
Q 013493 132 YYEDITFRDVLFDSG---FRGGGIFVIDSARIRINNCFFLHFTTQGILVQ------RGHETFISSCFLGQRSTVGGDPGE 202 (442)
Q Consensus 132 ~c~~iT~rnl~~D~n---~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~------~S~~V~I~nS~Igq~~t~gg~~~e 202 (442)
.|..++++++.++.. ....||.+..|+.+.|.||++. -..|+|.+. .++.+.|+||.+. +
T Consensus 181 ~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~-~gDDcIaiks~~~~~~s~nI~I~n~~~~--------~-- 249 (376)
T 1bhe_A 181 DGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIA-TGDDNVAIKAYKGRAETRNISILHNDFG--------T-- 249 (376)
T ss_dssp SCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEE-CSSCSEEEEECTTSCCEEEEEEEEEEEC--------S--
T ss_pred CCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEe-cCCCeEEEcccCCCCCceEEEEEeeEEE--------c--
Confidence 477888888888773 2567899999999999999884 578999999 4999999999998 1
Q ss_pred cCcceEEEEecC--C--Cc-eeeEEEEEeeeEeEEEc---cceeEEEEEEEecc
Q 013493 203 KGFSGTAIDLAS--N--DN-AITDVTIFSAAIGVLLR---GQANIVTRVHCYNK 248 (442)
Q Consensus 203 ~~~~gtgI~l~g--n--d~-~itDv~i~~a~~Gv~~~---gq~~~~~gvh~~n~ 248 (442)
|-||.+.+ + .+ .|.|..|.+...|+.+- +..-.++++++-|.
T Consensus 250 ----ghGisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni 299 (376)
T 1bhe_A 250 ----GHGMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNV 299 (376)
T ss_dssp ----SSCEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEE
T ss_pred ----cccEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeE
Confidence 12344432 1 11 56666666666676663 22234555555544
No 32
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.48 E-value=0.6 Score=46.34 Aligned_cols=128 Identities=12% Similarity=0.182 Sum_probs=69.0
Q ss_pred HHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEE-ecceEEeCCCCCCCcceEEEecCC
Q 013493 25 DAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVV-QGGTLRASDTFPSDRHLIELWAPN 103 (442)
Q Consensus 25 ~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i-~~GTLkAp~df~~d~~wI~f~~~n 103 (442)
+-||+|+++|-.... ...+|+|++|+|. .+|..+..+.+|++ .+| .+...|......
T Consensus 16 ~TIq~AI~aap~~~~-----------~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g---------~~~tiI~~~~~~ 73 (317)
T 1xg2_A 16 QTLAEAVAAAPDKSK-----------TRYVIYVKRGTYK--ENVEVASNKMNLMIVGDG---------MYATTITGSLNV 73 (317)
T ss_dssp SSHHHHHHHSCSSCS-----------SCEEEEECSEEEE--CCEEECTTSCSEEEEESC---------TTTEEEEECCCT
T ss_pred ccHHHHHhhcccCCC-----------ceEEEEEcCCEEe--eeeecCCCCCcEEEEEcC---------CCCcEEEecccc
Confidence 349999988743321 1268999999996 57888755566764 222 011233332210
Q ss_pred CcccccceeeecccceeeecccCcccCccceeeeeeeEEEecc-----eEecceeEeccccEEEeeeEEeeeccccEEEe
Q 013493 104 SQKLKRTDAIKIDRNYVFNDVKDQTARTYYEDITFRDVLFDSG-----FRGGGIFVIDSARIRINNCFFLHFTTQGILVQ 178 (442)
Q Consensus 104 ~l~v~G~GtfDgqG~~~W~~~~c~~~~~~c~~iT~rnl~~D~n-----~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~ 178 (442)
..+.+++.. ...+ ......++++|.|-.. ...-+|.+ .+.+..|.||.|.+. -|++.++
T Consensus 74 ---~~g~~t~~s--atv~---------v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~-QDTLy~~ 137 (317)
T 1xg2_A 74 ---VDGSTTFRS--ATLA---------AVGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAY-QDTLYAH 137 (317)
T ss_dssp ---TTTCCSGGG--CSEE---------ECSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECS-TTCEEEC
T ss_pred ---cCCCcccce--eEEE---------EECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCcc-ccceeec
Confidence 011112110 0000 0111222333333332 12334443 456677899999875 6779988
Q ss_pred eeeeEEEeeeeee
Q 013493 179 RGHETFISSCFLG 191 (442)
Q Consensus 179 ~S~~V~I~nS~Ig 191 (442)
.+.. ++++|.|.
T Consensus 138 ~~r~-~~~~c~I~ 149 (317)
T 1xg2_A 138 SQRQ-FYRDSYVT 149 (317)
T ss_dssp SSEE-EEESCEEE
T ss_pred CccE-EEEeeEEE
Confidence 7765 89999998
No 33
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=95.40 E-value=0.12 Score=51.32 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=73.3
Q ss_pred cceeeeeeeEEEecc-------eEecceeEeccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcC
Q 013493 132 YYEDITFRDVLFDSG-------FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKG 204 (442)
Q Consensus 132 ~c~~iT~rnl~~D~n-------~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~ 204 (442)
.|..++++++.++.. -.-.||.+-.|+.+.|.||++ .-..|+|.+.+++.|.|+++++. +
T Consensus 130 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i-~~gDDciaiksg~nI~i~n~~~~--------~---- 196 (339)
T 2iq7_A 130 SATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANV-KNQDDCLAINSGTNITFTGGTCS--------G---- 196 (339)
T ss_dssp SCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEE-ECSSCSEEESSEEEEEEESCEEE--------S----
T ss_pred ccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEE-ecCCCEEEEcCCccEEEEeEEEE--------C----
Confidence 577777888777764 236688888889999999987 45789999999999999999998 1
Q ss_pred cceEEEEecC----CCc-----eeeEEEEEeeeEeEEEcc---ceeEEEEEEEeccc
Q 013493 205 FSGTAIDLAS----NDN-----AITDVTIFSAAIGVLLRG---QANIVTRVHCYNKA 249 (442)
Q Consensus 205 ~~gtgI~l~g----nd~-----~itDv~i~~a~~Gv~~~g---q~~~~~gvh~~n~~ 249 (442)
+-||.+.+ ... .|.|..+.+...|+.+.. ..-.+++|++-|..
T Consensus 197 --ghGisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~ 251 (339)
T 2iq7_A 197 --GHGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGIT 251 (339)
T ss_dssp --SCCEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred --CceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEEEEEEEEeEE
Confidence 11455532 123 555666666667777732 22457888877764
No 34
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=95.30 E-value=0.12 Score=51.18 Aligned_cols=103 Identities=18% Similarity=0.292 Sum_probs=71.0
Q ss_pred cceeeeeeeEEEecc-------eEecceeEeccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcC
Q 013493 132 YYEDITFRDVLFDSG-------FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKG 204 (442)
Q Consensus 132 ~c~~iT~rnl~~D~n-------~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~ 204 (442)
.|..++++++.++.. -...||.+-.|+.+.|.||++ ....|+|.+.+++.+.|+++++. +
T Consensus 134 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i-~~gDDcIaiksg~nI~i~n~~~~--------~---- 200 (339)
T 1ia5_A 134 GSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATV-YNQDDCVAVNSGENIYFSGGYCS--------G---- 200 (339)
T ss_dssp SCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEE-ECSSCSEEESSEEEEEEESCEEE--------S----
T ss_pred cccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEE-EcCCCeEEEeCCeEEEEEeEEEE--------C----
Confidence 577777888877763 246788888889999999987 45889999999999999999998 1
Q ss_pred cceEEEEecC----CCc-----eeeEEEEEeeeEeEEEcc---ceeEEEEEEEeccc
Q 013493 205 FSGTAIDLAS----NDN-----AITDVTIFSAAIGVLLRG---QANIVTRVHCYNKA 249 (442)
Q Consensus 205 ~~gtgI~l~g----nd~-----~itDv~i~~a~~Gv~~~g---q~~~~~gvh~~n~~ 249 (442)
+-||.+.+ ... .|.|..+.+...|+.+.- ..-.+++|++-|..
T Consensus 201 --ghGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~nI~~~ni~ 255 (339)
T 1ia5_A 201 --GHGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVSDVTYKDIT 255 (339)
T ss_dssp --SSCEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred --CceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEEeeEEEEEE
Confidence 11455532 223 455555566666776632 22346666666553
No 35
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=95.25 E-value=0.15 Score=52.87 Aligned_cols=106 Identities=10% Similarity=0.200 Sum_probs=69.5
Q ss_pred cceeeeeeeEEEecc-eEecceeEeccccEEEeeeEEeeeccccEEEee------------eeeEEEeeeeeeeccccCC
Q 013493 132 YYEDITFRDVLFDSG-FRGGGIFVIDSARIRINNCFFLHFTTQGILVQR------------GHETFISSCFLGQRSTVGG 198 (442)
Q Consensus 132 ~c~~iT~rnl~~D~n-~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~------------S~~V~I~nS~Igq~~t~gg 198 (442)
.|..++++++.++.. ..-.||.+-.|+.+.|.||++.. ..|+|.+.+ ++.|.|++|++-..
T Consensus 220 ~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~----- 293 (448)
T 3jur_A 220 LSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQ----- 293 (448)
T ss_dssp SCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECS-----
T ss_pred ccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe-CCCcEEeccCccccccccCCCceeEEEEEeEEecC-----
Confidence 455666666655542 23456666678889999998865 899999986 58999999998310
Q ss_pred CCCCcCcceEEEEecCC-Cc-----eeeEEEEEeeeEeEEEc---cceeEEEEEEEeccc
Q 013493 199 DPGEKGFSGTAIDLASN-DN-----AITDVTIFSAAIGVLLR---GQANIVTRVHCYNKA 249 (442)
Q Consensus 199 ~~~e~~~~gtgI~l~gn-d~-----~itDv~i~~a~~Gv~~~---gq~~~~~gvh~~n~~ 249 (442)
+ .|-||.+.+- .+ .+.|..+.+...|+.+- +....+++|++-|..
T Consensus 294 -~-----gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~gG~v~nI~f~ni~ 347 (448)
T 3jur_A 294 -A-----SHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNV 347 (448)
T ss_dssp -S-----CSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTTCSEEEEEEEESCE
T ss_pred -C-----CcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCCCceEeeEEEEEEE
Confidence 1 1346777522 22 45555555666777662 334578888888764
No 36
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=94.57 E-value=0.34 Score=49.53 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=67.4
Q ss_pred EeccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEEEeeeEeEEE
Q 013493 154 VIDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAAIGVLL 233 (442)
Q Consensus 154 ~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i~~a~~Gv~~ 233 (442)
..+++.+.|.++.+.+-.-.+||+..++.+.|+++.|-. +|. . ..-||++.+.+-.|.|..|..+.=+|.+
T Consensus 132 ~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-----~d~--~--ntDGidi~~~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 132 LTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-----GNE--G--GLDGIDVWGSNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-----CSS--T--TCCSEEEEEEEEEEEEEEEESSSEEEEE
T ss_pred EcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-----CCC--C--CCccEeecCCeEEEEeeEEeCCCCeEEe
Confidence 333444444444444435689999999999999999984 111 1 1567888773337888888877777777
Q ss_pred cc--ceeEEEEEEEeccccccceeeEEEeecc----cceeeeeeeeeccc
Q 013493 234 RG--QANIVTRVHCYNKATAFGGIGILVKLAD----AALTRIDNCYLDYT 277 (442)
Q Consensus 234 ~g--q~~~~~gvh~~n~~t~~gg~gi~~~~~~----~~~~ri~ncyld~~ 277 (442)
.. +--.+++++|+. |-||-+.-.| ..-=++.||+|.-+
T Consensus 203 ~s~~~nI~I~n~~~~~------~~GisIGS~g~~~~v~nV~v~n~~~~~~ 246 (422)
T 1rmg_A 203 KSPANNILVESIYCNW------SGGCAMGSLGADTDVTDIVYRNVYTWSS 246 (422)
T ss_dssp EEEEEEEEEEEEEEES------SSEEEEEEECTTEEEEEEEEEEEEEESS
T ss_pred CCCCcCEEEEeEEEcC------CcceeecccCCCCcEEEEEEEeEEEecc
Confidence 44 444567777653 3466665322 11225667776543
No 37
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=94.27 E-value=0.36 Score=51.61 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=72.4
Q ss_pred cceeeeeeeEEEecc--eEecceeEeccccEEEeeeEEeeeccccEEEee-----------eeeEEEeeeeeeeccccCC
Q 013493 132 YYEDITFRDVLFDSG--FRGGGIFVIDSARIRINNCFFLHFTTQGILVQR-----------GHETFISSCFLGQRSTVGG 198 (442)
Q Consensus 132 ~c~~iT~rnl~~D~n--~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~-----------S~~V~I~nS~Igq~~t~gg 198 (442)
.|..++++++.++.. -...||.+-.|+.+.|.||++. -..|+|.+.+ ++.|.|+||++.. |
T Consensus 361 ~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~-~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~-----g 434 (608)
T 2uvf_A 361 ENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFD-TGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRM-----G 434 (608)
T ss_dssp SCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEE-CSSCSEEEECCCSGGGGGSCCEEEEEEESCEECS-----S
T ss_pred cCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEe-cCCceEEecCCcCccccccccccCEEEEeEEEeC-----C
Confidence 456666666655431 1356788888888889998875 3678888865 6899999999982 1
Q ss_pred CCCCcCcceEEEEecC-CCc-----eeeEEEEEeeeEeEEEc---cceeEEEEEEEeccccccc-eeeEEEee
Q 013493 199 DPGEKGFSGTAIDLAS-NDN-----AITDVTIFSAAIGVLLR---GQANIVTRVHCYNKATAFG-GIGILVKL 261 (442)
Q Consensus 199 ~~~e~~~~gtgI~l~g-nd~-----~itDv~i~~a~~Gv~~~---gq~~~~~gvh~~n~~t~~g-g~gi~~~~ 261 (442)
. | ++.+.+ ... .|.|..|.+...|+.+. +....+++|++-|..---- ..+|++++
T Consensus 435 -h------g-~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~ 499 (608)
T 2uvf_A 435 -H------G-AIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTL 499 (608)
T ss_dssp -S------C-SEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEE
T ss_pred -C------C-eEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEe
Confidence 0 0 111221 112 45555666666787762 3345688888887653222 35666653
No 38
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=93.87 E-value=0.17 Score=53.68 Aligned_cols=152 Identities=10% Similarity=0.096 Sum_probs=81.0
Q ss_pred CceE-EEecCceEEEeceEEeCCCCcceEE-ecceEEeCCC-CC---CC---------cceEEE------ecCCCccccc
Q 013493 51 GGVI-IDFQGGNYKISKPIRFPPGVGNVVV-QGGTLRASDT-FP---SD---------RHLIEL------WAPNSQKLKR 109 (442)
Q Consensus 51 Gga~-V~lPgGtYlIs~pI~f~pc~gni~i-~~GTLkAp~d-f~---~d---------~~wI~f------~~~n~l~v~G 109 (442)
.+.+ +|+++|.++. +++.|....-++.+ ..|+|..... +. .+ ...|.| .......++|
T Consensus 221 s~~~~L~l~~GA~L~-gs~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~G 299 (549)
T 1x0c_A 221 SSVTWVYFAPGAYVK-GAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNG 299 (549)
T ss_dssp TTCCEEEECTTEEEE-SCEEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEES
T ss_pred CCCCeEecCCCCEEE-EEEEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEEC
Confidence 3566 8999999987 78888743236665 5578877531 10 00 011222 2222223322
Q ss_pred ceeeecccceeeecccCcccCccc-ee--eeeeeEEEecc--eEecceeEeccccEEEeeeEEeeeccccEEEeeeeeEE
Q 013493 110 TDAIKIDRNYVFNDVKDQTARTYY-ED--ITFRDVLFDSG--FRGGGIFVIDSARIRINNCFFLHFTTQGILVQRGHETF 184 (442)
Q Consensus 110 ~GtfDgqG~~~W~~~~c~~~~~~c-~~--iT~rnl~~D~n--~~~~GIt~~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~ 184 (442)
-...+. ..|...- ..+| .. ++++++..+.. ..-.|+.+- +.+.|.||++ .-..|.|.+.+ +.|.
T Consensus 300 iti~Ns---p~w~i~i----~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i-~~gDDcIaIks-~NI~ 368 (549)
T 1x0c_A 300 VTVSAP---PFNSMDW----SGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFY-HTDDDGLKMYY-SNVT 368 (549)
T ss_dssp CEEECC---SSCSEEE----ECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEE-EESSCCEECCS-SSEE
T ss_pred cEEECC---CceeEEe----eccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEE-eCCCCEEEECC-CCEE
Confidence 212111 1232110 0123 34 55555554331 012455544 6688999987 44899999987 9999
Q ss_pred EeeeeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEEE
Q 013493 185 ISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIF 225 (442)
Q Consensus 185 I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i~ 225 (442)
|+||.+..- . .|-+|.+.+..+.|.|+.|-
T Consensus 369 I~n~~~~~~------~-----g~~~IsiGs~~~~V~NV~v~ 398 (549)
T 1x0c_A 369 ARNIVMWKE------S-----VAPVVEFGWTPRNTENVLFD 398 (549)
T ss_dssp EEEEEEEEC------S-----SSCSEECCBSCCCEEEEEEE
T ss_pred EEeeEEEcC------C-----CCceEEECCCCCcEEEEEEE
Confidence 999999611 1 12226665545566666554
No 39
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=93.18 E-value=0.27 Score=53.07 Aligned_cols=95 Identities=17% Similarity=0.136 Sum_probs=59.5
Q ss_pred ceEecceeEecccc--EEEeeeEEeeeccccEEEee------eeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCc
Q 013493 146 GFRGGGIFVIDSAR--IRINNCFFLHFTTQGILVQR------GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN 217 (442)
Q Consensus 146 n~~~~GIt~~NSq~--~~I~Nc~~~~fNTDGIhI~~------S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~ 217 (442)
+..+.+++++||++ +.|.++.. | |||++.+ ++.|.|++|.|.. .||. + |.+.+..+
T Consensus 144 NV~I~gVti~NSp~~gI~I~~~~~---N-DGid~DGi~fd~~S~NV~I~Nc~I~~----tGDD------c--IaIksseN 207 (609)
T 3gq8_A 144 NVYIRDIEAVDCTLHGIDITCGGL---D-YPYLGDGTTAPNPSENIWIENCEATG----FGDD------G--ITTHHSQY 207 (609)
T ss_dssp EEEEEEEEEESCSSCSEEEECSSS---S-CCCCCTTCCCSSCCEEEEEESCEEES----CSSC------S--EEECSCEE
T ss_pred eEEEEeeEEEeCCCCCeEEeCCCC---C-ccccCCCccccccceeEEEEeeEEEe----cCCC------E--EEecCCee
Confidence 56777777777755 44544422 4 8888887 9999999999941 1333 3 44454444
Q ss_pred -eeeEEEEE-----eeeEeEEEccc-ee-EEEEEEEeccccccceeeEEEee
Q 013493 218 -AITDVTIF-----SAAIGVLLRGQ-AN-IVTRVHCYNKATAFGGIGILVKL 261 (442)
Q Consensus 218 -~itDv~i~-----~a~~Gv~~~gq-~~-~~~gvh~~n~~t~~gg~gi~~~~ 261 (442)
.|.|..+. |..-|+.+.+. .| ++++++++|+. -||.+|-
T Consensus 208 I~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~-----~GIrIKt 254 (609)
T 3gq8_A 208 INILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCY-----GGIEIKA 254 (609)
T ss_dssp EEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSS-----EEEEEEE
T ss_pred EEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCC-----CEEEEEe
Confidence 77888883 33578888654 22 35555555543 3677774
No 40
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=92.47 E-value=0.48 Score=48.29 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=57.5
Q ss_pred ccEEEeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecC--CCceeeEEEEEeee-------
Q 013493 158 ARIRINNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLAS--NDNAITDVTIFSAA------- 228 (442)
Q Consensus 158 q~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~g--nd~~itDv~i~~a~------- 228 (442)
..++|.++.+.+..+.||++.+ +...|++|.|... ..+||.+.+ .++.|.+..|.+-.
T Consensus 115 ~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n------------~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~ 181 (400)
T 1ru4_A 115 DYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN------------RNTGLEINNGGSYNTVINSDAYRNYDPKKNGS 181 (400)
T ss_dssp SCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC------------SSCSEEECTTCCSCEEESCEEECCCCTTTTTS
T ss_pred CeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC------------CceeEEEEcccCCeEEEceEEEcccCccccCc
Confidence 3455555555555566999987 5667999999811 145788874 25677777776432
Q ss_pred --EeEEE---ccceeEEEEEEEeccccccceeeEEEeecccceeeeeeeee
Q 013493 229 --IGVLL---RGQANIVTRVHCYNKATAFGGIGILVKLADAALTRIDNCYL 274 (442)
Q Consensus 229 --~Gv~~---~gq~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~~ri~ncyl 274 (442)
-|+.+ .+.-|++++++.|+-. .-||.+.-+ .....|.||+.
T Consensus 182 ~~dG~~~~~~~g~Gn~~~~~~~~~N~----ddGidl~~~-~~~v~i~nn~a 227 (400)
T 1ru4_A 182 MADGFGPKQKQGPGNRFVGCRAWENS----DDGFDLFDS-PQKVVIENSWA 227 (400)
T ss_dssp SCCSEEECTTCCSCCEEESCEEESCS----SCSEECTTC-CSCCEEESCEE
T ss_pred ccceEEEEecccCCeEEECCEEeecC----CCcEEEEec-CCCEEEEeEEE
Confidence 13322 2456777777766432 234444311 23346777755
No 41
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=92.18 E-value=4 Score=40.19 Aligned_cols=81 Identities=12% Similarity=0.163 Sum_probs=48.2
Q ss_pred EeeeEEeeeccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCc-eeeEEEEEeeeEeEEEcc-ceeE
Q 013493 162 INNCFFLHFTTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN-AITDVTIFSAAIGVLLRG-QANI 239 (442)
Q Consensus 162 I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~-~itDv~i~~a~~Gv~~~g-q~~~ 239 (442)
|.++.+..----+||+. ++.+.|++..|-...... ......-||++.+..+ .|.|..|..+.=+|.+.. .--+
T Consensus 113 i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~----~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~ 187 (336)
T 1nhc_A 113 FKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDD----NGGHNTDGFDISESTGVYISGATVKNQDDCIAINSGESIS 187 (336)
T ss_dssp EESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHH----HTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSEEEEE
T ss_pred EEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCccc----ccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEE
Confidence 33333333346789999 999999999998432100 0011255788886544 677777766666666643 3334
Q ss_pred EEEEEEec
Q 013493 240 VTRVHCYN 247 (442)
Q Consensus 240 ~~gvh~~n 247 (442)
+++++|++
T Consensus 188 i~n~~~~~ 195 (336)
T 1nhc_A 188 FTGGTCSG 195 (336)
T ss_dssp EESCEEES
T ss_pred EEeEEEEC
Confidence 55555553
No 42
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=91.48 E-value=0.56 Score=51.94 Aligned_cols=95 Identities=16% Similarity=0.119 Sum_probs=60.1
Q ss_pred ceEecceeEecccc--EEEeeeEEeeeccccEEEee------eeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCc
Q 013493 146 GFRGGGIFVIDSAR--IRINNCFFLHFTTQGILVQR------GHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDN 217 (442)
Q Consensus 146 n~~~~GIt~~NSq~--~~I~Nc~~~~fNTDGIhI~~------S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~ 217 (442)
+..+.+++++||++ ++|.++.. | |||++.+ |+.|.|++|.|.. .||. +. .+.+..|
T Consensus 144 NV~I~gVti~NSp~~gI~I~np~~---N-DGid~DGi~fdi~S~NV~I~Nc~I~n----tGDD------cI--AIksSeN 207 (772)
T 3gqn_A 144 NVYIRDIEAVDCTLHGIDITCGGL---D-YPYLGDGTTAPNPSENIWIENCEATG----FGDD------GI--TTHHSQY 207 (772)
T ss_dssp EEEEEEEEEESCSSCSEEEECSSS---S-CCCCCTTCCCSSCCEEEEEESCEEES----CSSC------SE--EECSCEE
T ss_pred eEEEEeEEEEeCCCCCEEEeCCCc---C-CcCCCcCcccccccceEEEEeeEEEe----cCcC------eE--EecCCce
Confidence 56677777777755 44444321 4 8888887 9999999999941 1333 34 4454444
Q ss_pred -eeeEEEEE-----eeeEeEEEccc--eeEEEEEEEeccccccceeeEEEee
Q 013493 218 -AITDVTIF-----SAAIGVLLRGQ--ANIVTRVHCYNKATAFGGIGILVKL 261 (442)
Q Consensus 218 -~itDv~i~-----~a~~Gv~~~gq--~~~~~gvh~~n~~t~~gg~gi~~~~ 261 (442)
.|.|..+. |..-|+.+++. --++++++++|... ||.+|-
T Consensus 208 I~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~n-----GIRIKt 254 (772)
T 3gqn_A 208 INILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYG-----GIEIKA 254 (772)
T ss_dssp EEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSE-----EEEECC
T ss_pred EEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCc-----EEEEEE
Confidence 77888883 33578888653 23466666665543 677773
No 43
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=90.69 E-value=2.5 Score=42.95 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=55.3
Q ss_pred CeeeeecccCCCCCCCchhHHHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceE-Eecce
Q 013493 5 GRVFYPIGYGADPTGANESSDAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVV-VQGGT 83 (442)
Q Consensus 5 ~rvfNV~dYGAdpdG~tDsT~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~-i~~GT 83 (442)
+|++..++|||.++-.+|+++||.+.+..- + -|.+|.|.|-- .-|.+..|. +- ...|+
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s~------~------------~v~i~~gvf~s-s~i~~~~c~--l~g~g~g~ 120 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNSQ------K------------AVTISDGVFSS-SGINSNYCN--LDGRGSGV 120 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTSS------S------------CEECCSEEEEE-CCEEESCCE--EECTTTEE
T ss_pred heeeecccccccCCcccCcHHHHHhhhccc------c------------cEecccccccc-ccccccccc--ccccCCce
Confidence 568889999999999999999999887531 1 28999999986 457777883 32 35667
Q ss_pred EEeCCCCCCCcceEEEecCCC
Q 013493 84 LRASDTFPSDRHLIELWAPNS 104 (442)
Q Consensus 84 LkAp~df~~d~~wI~f~~~n~ 104 (442)
|+- +..+...+.|..|+.
T Consensus 121 ~~~---~~~~gn~lvfn~p~~ 138 (542)
T 2x3h_A 121 LSH---RSSTGNYLVFNNPRT 138 (542)
T ss_dssp EEE---CSSSSCCEEEESCEE
T ss_pred eee---ecCCCCEEEEeCCCC
Confidence 776 334444566766664
No 44
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=87.94 E-value=3.7 Score=42.77 Aligned_cols=83 Identities=12% Similarity=0.035 Sum_probs=53.6
Q ss_pred cceeEeccccEEEeeeEEeee-cccc-EEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCC--------Cc--
Q 013493 150 GGIFVIDSARIRINNCFFLHF-TTQG-ILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASN--------DN-- 217 (442)
Q Consensus 150 ~GIt~~NSq~~~I~Nc~~~~f-NTDG-IhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gn--------d~-- 217 (442)
.|+.+ .|+.+.|.||.+..- +++| ++...++.|.|+||.+.. +.||.+... .+
T Consensus 168 DGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~g--------------g~GIrIktg~d~IG~~~~g~v 232 (464)
T 1h80_A 168 NGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEG--------------GIALRMETDNLLMKNYKQGGI 232 (464)
T ss_dssp TTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEES--------------SEEEEEECCCHHHHHHTCCEE
T ss_pred CCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEEC--------------CCEEEEEeCCceeccCCCCcE
Confidence 45554 677788999987665 6778 899999999999999882 345555422 23
Q ss_pred ---eeeEEEEEeeeEeEEEccceeEEEEEEEec
Q 013493 218 ---AITDVTIFSAAIGVLLRGQANIVTRVHCYN 247 (442)
Q Consensus 218 ---~itDv~i~~a~~Gv~~~gq~~~~~gvh~~n 247 (442)
.+.|..+....-+|.+......+++|++-|
T Consensus 233 ~NI~~~Ni~~~nv~~~I~I~p~~~~isnItfeN 265 (464)
T 1h80_A 233 RNIFADNIRCSKGLAAVMFGPHFMKNGDVQVTN 265 (464)
T ss_dssp EEEEEEEEEEESSSEEEEEECTTCBCCCEEEEE
T ss_pred EEEEEEeEEEECCceeEEEeCCCceEeEEEEEE
Confidence 455555556666777763332234444443
No 45
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=87.29 E-value=15 Score=37.01 Aligned_cols=47 Identities=13% Similarity=0.175 Sum_probs=36.3
Q ss_pred ecceeEeccccEEEeeeEEeeeccccEE--EeeeeeEEEeeeeeeeccc
Q 013493 149 GGGIFVIDSARIRINNCFFLHFTTQGIL--VQRGHETFISSCFLGQRST 195 (442)
Q Consensus 149 ~~GIt~~NSq~~~I~Nc~~~~fNTDGIh--I~~S~~V~I~nS~Igq~~t 195 (442)
.++|.+..+..+.||.|.+......-+. ...++.|+|++|.|.++..
T Consensus 153 ~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~ 201 (359)
T 1idk_A 153 GDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSD 201 (359)
T ss_dssp CCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCS
T ss_pred CCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcc
Confidence 3678888888899999999877433333 3568999999999997763
No 46
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=86.61 E-value=4.8 Score=40.30 Aligned_cols=132 Identities=16% Similarity=0.233 Sum_probs=79.4
Q ss_pred EeEEEcccee-EEEEEEEeccc------------------cccceeeEEEeecccceeeeeeeeeccc--cee--eeCCe
Q 013493 229 IGVLLRGQAN-IVTRVHCYNKA------------------TAFGGIGILVKLADAALTRIDNCYLDYT--GIV--LEDPV 285 (442)
Q Consensus 229 ~Gv~~~gq~~-~~~gvh~~n~~------------------t~~gg~gi~~~~~~~~~~ri~ncyld~~--~iv--~~dp~ 285 (442)
.|+.+.+..| +|+++|+.++. ...+|=+|.+. +.+.-+|+.|.|.+. +++ -+..-
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~--~s~nVwIDHcs~s~~~Dg~id~~~~s~ 183 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR--NVTNAWIDHNSLSDCSDGLIDVTLGST 183 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE--SCEEEEEESCEEECCSSEEEEEESSCE
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe--cCceEEEEeeEEecCCCCcEeeccCcc
Confidence 4555555444 46888888763 22456677765 678889999998764 332 35677
Q ss_pred EEEEEceEEeecceeEeeec-----cceeeeeEEeeeec-cCCCCCCccEEEecCCcceeeEEEEecccccceeeeeeee
Q 013493 286 QVHVTNGFFLGDANIVLKSI-----KGRISGLTIVENMF-NGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAG 359 (442)
Q Consensus 286 ~~~i~~~~flgd~~i~l~~~-----~~~~~g~~i~~n~f-~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm~~~~t~~ 359 (442)
-++||+++|-.-....|=-- ...-..+++.+|.| .+. ....|.++ .|.++-+..++-+ +.-.++..+ .-+
T Consensus 184 ~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~-~~R~Pr~r-~g~~hv~NN~~~~-~~~~~i~~~-~~~ 259 (346)
T 1pxz_A 184 GITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNA-GQRMPRAR-YGLVHVANNNYDP-WNIYAIGGS-SNP 259 (346)
T ss_dssp EEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSE-EECTTEEE-SSEEEEESCEECC-CSSCSEEEE-SCC
T ss_pred eEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCc-cccCccEe-cceEEEEeeEEEc-ccceEEecc-CCc
Confidence 89999999975433333211 11224678999999 666 33447776 3555555555533 223444432 235
Q ss_pred eeeeccC
Q 013493 360 KLSVAGN 366 (442)
Q Consensus 360 ~~~~~~~ 366 (442)
+..+++|
T Consensus 260 ~i~~egN 266 (346)
T 1pxz_A 260 TILSEGN 266 (346)
T ss_dssp EEEEESC
T ss_pred eEEEECC
Confidence 5666666
No 47
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=85.97 E-value=6.6 Score=39.73 Aligned_cols=35 Identities=14% Similarity=0.407 Sum_probs=28.6
Q ss_pred ccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeee
Q 013493 156 DSARIRINNCFFLHFTTQGILVQRGHETFISSCFLG 191 (442)
Q Consensus 156 NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Ig 191 (442)
++-+..|.||.|.++ -|.+.++.+...+.++|.|.
T Consensus 164 ~~D~~~f~~C~f~G~-QDTLy~~~~gr~yf~~c~I~ 198 (364)
T 3uw0_A 164 NSDKARFKAVKLEGY-QDTLYSKTGSRSYFSDCEIS 198 (364)
T ss_dssp TCEEEEEEEEEEECS-BSCEEECTTCEEEEESCEEE
T ss_pred CCCeEEEEeeEEEec-ccceEeCCCCCEEEEcCEEE
Confidence 356677899999887 48888886678899999998
No 48
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=85.22 E-value=16 Score=36.45 Aligned_cols=35 Identities=17% Similarity=0.421 Sum_probs=27.3
Q ss_pred eccccEEEeeeEEeeeccccEEEeeeeeEEEeeeeee
Q 013493 155 IDSARIRINNCFFLHFTTQGILVQRGHETFISSCFLG 191 (442)
Q Consensus 155 ~NSq~~~I~Nc~~~~fNTDGIhI~~S~~V~I~nS~Ig 191 (442)
+.+.+..|.+|.|.+. -|.+.++.+ ..+.++|.|.
T Consensus 137 v~~d~~~f~~c~f~G~-QDTLy~~~g-r~~~~~c~I~ 171 (342)
T 2nsp_A 137 KSGDRAYFKDVSLVGY-QATLYVSGG-RSFFSDCRIS 171 (342)
T ss_dssp TTCBSEEEEEEEEECS-TTCEEECSS-EEEEESCEEE
T ss_pred eccCcEEEEeeEEecc-cceEEECCC-CEEEEcCEEE
Confidence 3456678999999886 566888855 5888999998
No 49
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=84.57 E-value=29 Score=34.82 Aligned_cols=46 Identities=22% Similarity=0.235 Sum_probs=35.9
Q ss_pred ecceeEeccccEEEeeeEEeeeccccEE---EeeeeeEEEeeeeeeeccc
Q 013493 149 GGGIFVIDSARIRINNCFFLHFTTQGIL---VQRGHETFISSCFLGQRST 195 (442)
Q Consensus 149 ~~GIt~~NSq~~~I~Nc~~~~fNTDGIh---I~~S~~V~I~nS~Igq~~t 195 (442)
..+|.+..+..+.|+.|.+... .|+.. .+.++.|+|++|.|.++..
T Consensus 153 ~DaI~i~~s~nvwIDHcs~s~~-~d~~~~~~~~~s~~vTISnn~f~~~~~ 201 (359)
T 1qcx_A 153 GDAITVDDSDLVWIDHVTTARI-GRQHIVLGTSADNRVTISYSLIDGRSD 201 (359)
T ss_dssp CCSEEEESCCCEEEESCEEEEE-SSCSEEECSSCCEEEEEESCEEECBCS
T ss_pred CceeEecCCceEEEEeeEeecc-CcCceeecccccccEEEECcEecCCcc
Confidence 4678888888899999998776 45433 3478999999999997654
No 50
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=84.15 E-value=2 Score=43.27 Aligned_cols=48 Identities=19% Similarity=0.105 Sum_probs=40.4
Q ss_pred EecceeEeccccEEEeeeEEeeecccc-EEEe-eeeeEEEeeeeeeecccc
Q 013493 148 RGGGIFVIDSARIRINNCFFLHFTTQG-ILVQ-RGHETFISSCFLGQRSTV 196 (442)
Q Consensus 148 ~~~GIt~~NSq~~~I~Nc~~~~fNTDG-IhI~-~S~~V~I~nS~Igq~~t~ 196 (442)
...+|.+..|+.+.||.|.+... .|| |.+. .++.|+|++|.|.+|...
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~-~Dg~idi~~~s~~vTISnn~f~~h~k~ 164 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNG-NDGAVDIKKYSNYITVSWNKFVDHDKV 164 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESC-SSCSEEEETTCEEEEEESCEEESCSBC
T ss_pred CCCeEEEecCCcEEEEeeeeccC-CccceEEecCCceEEEECcEeccCcee
Confidence 56789999999999999999776 677 7776 489999999999987643
No 51
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=79.65 E-value=16 Score=36.74 Aligned_cols=111 Identities=13% Similarity=0.234 Sum_probs=71.1
Q ss_pred eEEEcccee-EEEEEEEecccc---------cc--ceeeEEEeecccceeeeeeeeecc-------------------cc
Q 013493 230 GVLLRGQAN-IVTRVHCYNKAT---------AF--GGIGILVKLADAALTRIDNCYLDY-------------------TG 278 (442)
Q Consensus 230 Gv~~~gq~~-~~~gvh~~n~~t---------~~--gg~gi~~~~~~~~~~ri~ncyld~-------------------~~ 278 (442)
|+.+.+..| +|+++|+-+... ++ .|=+|.+ .+.+.=|||.|.|.. .+
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i--~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dg 174 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVI--DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDG 174 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEe--cCCCcEEEEeeEEeccccCccccccccCcccccccc
Confidence 566655555 679999976421 11 2456654 478889999999974 23
Q ss_pred e--eeeCCeEEEEEceEEeecceeEeeecc-c------eeeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEE
Q 013493 279 I--VLEDPVQVHVTNGFFLGDANIVLKSIK-G------RISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVI 344 (442)
Q Consensus 279 i--v~~dp~~~~i~~~~flgd~~i~l~~~~-~------~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v 344 (442)
+ +-.+.--++||+++|-+--...|---. . .-..+++-+|.|.+. ....|.++- |.++-++.++.
T Consensus 175 l~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~-~~R~PrvR~-G~~Hv~NN~~~ 247 (355)
T 1pcl_A 175 ALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRV-TERAPRVRF-GSIHAYNNVYL 247 (355)
T ss_pred ceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCC-cccCCceec-ceEEEEcceEE
Confidence 2 233566789999999876655443221 1 112599999999877 444587652 56666666654
No 52
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=78.12 E-value=13 Score=36.80 Aligned_cols=133 Identities=14% Similarity=0.180 Sum_probs=82.1
Q ss_pred eEEEc-ccee-EEEEEEEeccccccceeeEEEeec---ccceeeeeeeeecc-------------cce--eeeCCeEEEE
Q 013493 230 GVLLR-GQAN-IVTRVHCYNKATAFGGIGILVKLA---DAALTRIDNCYLDY-------------TGI--VLEDPVQVHV 289 (442)
Q Consensus 230 Gv~~~-gq~~-~~~gvh~~n~~t~~gg~gi~~~~~---~~~~~ri~ncyld~-------------~~i--v~~dp~~~~i 289 (442)
|+.+. +..| +|+++|+-+...+.+|=+|-+.-. ..+.=|||.|.|.+ -++ +-+..--++|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 45554 4444 679999998877778888877621 25788999999943 222 2346789999
Q ss_pred EceEEeecceeEeeecc-c----eeeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccccceeeeeeeeeeeec
Q 013493 290 TNGFFLGDANIVLKSIK-G----RISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVA 364 (442)
Q Consensus 290 ~~~~flgd~~i~l~~~~-~----~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm~~~~t~~~~~~~ 364 (442)
|+++|-.-....|---. . .-..+++-+|.|.+...+ .|.++- |.++-++.++-+ ..-.++..+. -++..++
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R-~Pr~r~-G~~hv~NN~~~n-~~~~~i~~~~-~~~i~~e 242 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESR-VPLQRF-GLSHIYNNYFNN-VTTSGINVRM-GGIAKIE 242 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEEC-TTEEES-SEEEEESCEEEE-ECSCSEEEET-TCEEEEE
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCC-CCceec-ceEEEEeeEEEc-ccceEeccCC-CcEEEEE
Confidence 99999754444332211 0 014689999999876333 486652 555544554433 3334444322 3566667
Q ss_pred cC
Q 013493 365 GN 366 (442)
Q Consensus 365 ~~ 366 (442)
+|
T Consensus 243 ~N 244 (330)
T 2qy1_A 243 SN 244 (330)
T ss_dssp SC
T ss_pred cc
Confidence 77
No 53
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=77.69 E-value=3.9 Score=41.13 Aligned_cols=47 Identities=9% Similarity=0.035 Sum_probs=36.7
Q ss_pred EecceeEeccccEEEeeeEEeee----------------ccccE-EEe-eeeeEEEeeeeeeecc
Q 013493 148 RGGGIFVIDSARIRINNCFFLHF----------------TTQGI-LVQ-RGHETFISSCFLGQRS 194 (442)
Q Consensus 148 ~~~GIt~~NSq~~~I~Nc~~~~f----------------NTDGI-hI~-~S~~V~I~nS~Igq~~ 194 (442)
...+|.+.+|+.+.|+.|.|..- ..||. .+. .++.|+|++|.|.+|.
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~ 196 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHD 196 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCC
Confidence 35788888889999999988752 25773 354 6899999999999765
No 54
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=77.62 E-value=10 Score=38.16 Aligned_cols=129 Identities=19% Similarity=0.315 Sum_probs=78.7
Q ss_pred eEEEc-ccee-EEEEEEEecccc--ccceeeEEEeecccceeeeeeeeecccc--e---eeeCCeEEEEEceEEeecce-
Q 013493 230 GVLLR-GQAN-IVTRVHCYNKAT--AFGGIGILVKLADAALTRIDNCYLDYTG--I---VLEDPVQVHVTNGFFLGDAN- 299 (442)
Q Consensus 230 Gv~~~-gq~~-~~~gvh~~n~~t--~~gg~gi~~~~~~~~~~ri~ncyld~~~--i---v~~dp~~~~i~~~~flgd~~- 299 (442)
|+.+. +..| +|+++|+-+... ..+|-+|.+. +.+.-|||.|.|-+.+ + ..+..--++||+++|-+.-.
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~--~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~ 202 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD--DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDY 202 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE--SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSS
T ss_pred eEEEecCCCCEEEeCcEEEecCCcccccCceeEec--CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccc
Confidence 44553 3333 678888887543 4578888876 5677799999987652 2 24467789999999986421
Q ss_pred -----------eEeeeccceeeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccccceeeeeeeeeeeeccC
Q 013493 300 -----------IVLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 366 (442)
Q Consensus 300 -----------i~l~~~~~~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm~~~~t~~~~~~~~~ 366 (442)
..| -|.=..+.+-+|+|... ....|.++-.+.++-++.++-+ +.-.++..+ .-++..+++|
T Consensus 203 s~~~~G~H~~~~~l---~G~sd~vT~~~N~f~~~-~~R~Pr~r~~~~~hv~NN~~~n-~~~~a~~~~-~~~~i~~e~N 274 (359)
T 1qcx_A 203 SATCNGHHYWGVYL---DGSNDMVTLKGNYFYNL-SGRMPKVQGNTLLHAVNNLFHN-FDGHAFEIG-TGGYVLAEGN 274 (359)
T ss_dssp BTTSSSBBSCCEEE---CCSSEEEEEESCEEESB-CSCTTEECSSEEEEEESCEEEE-EEEEEEEEC-TTEEEEEESC
T ss_pred cccCcccccceeEE---ecCCCCeehcccEeccC-cccCceecCCceEEEEccEEEC-ccCeEEecC-CCceEEEEee
Confidence 111 11113689999999877 5556887654445555555433 222333332 1355666666
No 55
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=74.78 E-value=1 Score=47.29 Aligned_cols=24 Identities=29% Similarity=0.336 Sum_probs=21.3
Q ss_pred ccCCCCCCCchhHHHHHHHHHHhh
Q 013493 12 GYGADPTGANESSDAILQALNDAF 35 (442)
Q Consensus 12 dYGAdpdG~tDsT~AfqkAw~dAc 35 (442)
.=||++||++|+|+|+..|++++-
T Consensus 3 ~~~a~gdgvtddt~a~~~~l~~~~ 26 (670)
T 3ju4_A 3 RGSAKGDGVTDDTAALTSALNDTP 26 (670)
T ss_dssp CCCCCCEEEEECHHHHHHHHHHSC
T ss_pred CCcccCCCccCcHHHHHHHhccCC
Confidence 348999999999999999998864
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=74.42 E-value=22 Score=35.74 Aligned_cols=131 Identities=18% Similarity=0.242 Sum_probs=75.4
Q ss_pred eEEEcccee-EEEEEEEecccc-ccceeeEEEeecccceeeeeeeeeccc---------------cee--eeCCeEEEEE
Q 013493 230 GVLLRGQAN-IVTRVHCYNKAT-AFGGIGILVKLADAALTRIDNCYLDYT---------------GIV--LEDPVQVHVT 290 (442)
Q Consensus 230 Gv~~~gq~~-~~~gvh~~n~~t-~~gg~gi~~~~~~~~~~ri~ncyld~~---------------~iv--~~dp~~~~i~ 290 (442)
|+.+.+..| ||+++|+-.... ..+|=+|-+. +.+.=|||.|.|.+. +++ -.+.--++||
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~--~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTIS 181 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD--DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVS 181 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEE--SCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEE
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEee--CCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEE
Confidence 444444334 568888865321 2355666655 678889999988542 221 2456689999
Q ss_pred ceEEeecceeEeeecc--ceeeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccccceeeeeeeeeeeeccC
Q 013493 291 NGFFLGDANIVLKSIK--GRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 366 (442)
Q Consensus 291 ~~~flgd~~i~l~~~~--~~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm~~~~t~~~~~~~~~ 366 (442)
+++|-+--...|---. -.-..+++.+|.|.+.-.+. |.++ -|.|+-++.++-+ ..-.++..+. -++..+++|
T Consensus 182 nn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~-Pr~r-~G~~Hv~NN~~~n-~~~~~~~~~~-~~~i~~e~N 255 (353)
T 1air_A 182 YNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARL-PLQR-GGLVHAYNNLYTN-ITGSGLNVRQ-NGQALIENN 255 (353)
T ss_dssp SCEEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECS-CEEE-SSEEEEESCEEEE-ESSCSEEEET-TCEEEEESC
T ss_pred eeEEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCC-CCCc-CceEEEEccEEEC-CCCceeccCC-CcEEEEEce
Confidence 9999976554442111 01156899999998763334 7654 2655555554432 3334444321 344555555
No 57
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=73.65 E-value=17 Score=36.57 Aligned_cols=129 Identities=19% Similarity=0.267 Sum_probs=78.6
Q ss_pred eEEEc-ccee-EEEEEEEeccc--cccceeeEEEeecccceeeeeeeeeccc--cee---eeCCeEEEEEceEEeecc--
Q 013493 230 GVLLR-GQAN-IVTRVHCYNKA--TAFGGIGILVKLADAALTRIDNCYLDYT--GIV---LEDPVQVHVTNGFFLGDA-- 298 (442)
Q Consensus 230 Gv~~~-gq~~-~~~gvh~~n~~--t~~gg~gi~~~~~~~~~~ri~ncyld~~--~iv---~~dp~~~~i~~~~flgd~-- 298 (442)
|+.+. +..| +|+++|+-+.. ...||=+|.+. +.+--|||.|-|-+. .++ .+..--++||+++|-|..
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~--~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~ 202 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD--DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDY 202 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEEC--SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSC
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeec--CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCccc
Confidence 45554 3334 57888888742 23678888765 678889999988653 222 345678999999998653
Q ss_pred ----------eeEeeeccceeeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccccceeeeeeeeeeeeccC
Q 013493 299 ----------NIVLKSIKGRISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 366 (442)
Q Consensus 299 ----------~i~l~~~~~~~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm~~~~t~~~~~~~~~ 366 (442)
...|- |.=..+++-+|.|... ..-.|.++--..++-++.++- +..-.++..+. -++..+++|
T Consensus 203 s~~~~G~h~~~~~L~---G~sd~vT~hhN~f~~~-~~R~Pr~r~g~~~hv~NN~~~-n~~~~~i~~~~-~~~i~~e~N 274 (359)
T 1idk_A 203 SATCDGYHYWAIYLD---GDADLVTMKGNYIYHT-SGRSPKVQDNTLLHAVNNYWY-DISGHAFEIGE-GGYVLAEGN 274 (359)
T ss_dssp BTTSSSBBSCCEEEC---CSSCEEEEESCEEESB-CSCTTEECTTCEEEEESCEEE-EEEEEEEEECT-TCEEEEESC
T ss_pred ccccCccccceEEEE---ecCCCeEEEceEeecC-cccCccccCCceEEEECCEEe-cccceEEeccC-CcEEEEEcc
Confidence 12221 2113689999999866 444477653223555555443 33334444432 255666666
No 58
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=73.39 E-value=6.5 Score=39.72 Aligned_cols=48 Identities=10% Similarity=0.171 Sum_probs=38.1
Q ss_pred EecceeEec-cccEEEeeeEEeee----------------cccc-EEEe-eeeeEEEeeeeeeeccc
Q 013493 148 RGGGIFVID-SARIRINNCFFLHF----------------TTQG-ILVQ-RGHETFISSCFLGQRST 195 (442)
Q Consensus 148 ~~~GIt~~N-Sq~~~I~Nc~~~~f----------------NTDG-IhI~-~S~~V~I~nS~Igq~~t 195 (442)
...+|.+.. |..+.||.|.|..- ..|| |.+. .++.|+|++|.|.+|..
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k 208 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDK 208 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEE
T ss_pred CCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCc
Confidence 367899988 89999999998753 2577 4454 58999999999998764
No 59
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=73.18 E-value=22 Score=35.46 Aligned_cols=130 Identities=20% Similarity=0.235 Sum_probs=81.9
Q ss_pred eEEEcccee-EEEEEEEeccccccceeeEEEeecc-cceeeeeeeeecc-----------ccee--eeCCeEEEEEceEE
Q 013493 230 GVLLRGQAN-IVTRVHCYNKATAFGGIGILVKLAD-AALTRIDNCYLDY-----------TGIV--LEDPVQVHVTNGFF 294 (442)
Q Consensus 230 Gv~~~gq~~-~~~gvh~~n~~t~~gg~gi~~~~~~-~~~~ri~ncyld~-----------~~iv--~~dp~~~~i~~~~f 294 (442)
|+.+.+..| +|+++|+-+.. ..+|=+|.+. + .+--|||.|-+.+ -+++ -.+.--++||++.|
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~--~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f 172 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVR-EGEGTAIEVT--DDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKF 172 (326)
T ss_dssp CEEEESEEEEEEESCEEECCC-STTSCSEEEE--TTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEE
T ss_pred EEEEEecceEEEECeEEEcCC-CCCCCeEEEe--cCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEE
Confidence 455544444 78889998776 5577788766 3 5778999999942 2332 23467899999999
Q ss_pred eecceeEeeecc-ce---eeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEecccccceeeeeeeeeeeeccC
Q 013493 295 LGDANIVLKSIK-GR---ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIERNNVNGMSLKSTAGKLSVAGN 366 (442)
Q Consensus 295 lgd~~i~l~~~~-~~---~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~n~~~gm~~~~t~~~~~~~~~ 366 (442)
-.-....|---. .. -..+++.+|.|... ..-.|.++ -|.++-+..++-+ ..-.++..+. -++..+++|
T Consensus 173 ~~h~k~~LiG~sd~~~~~~~~vT~~~N~f~~~-~~R~Pr~r-~G~~Hv~NN~~~n-~~~~~~~~~~-~a~v~~e~N 244 (326)
T 3vmv_A 173 ENHWKTMLVGHTDNASLAPDKITYHHNYFNNL-NSRVPLIR-YADVHMFNNYFKD-INDTAINSRV-GARVFVENN 244 (326)
T ss_dssp EEEEECEEECSSSCGGGCCEEEEEESCEEEEE-EECTTEEE-SCEEEEESCEEEE-ESSCSEEEET-TCEEEEESC
T ss_pred ecCceEEEECCCCCCcccCccEEEEeeEecCC-cCcCCccc-CCcEEEEccEEEC-CCceEEeecC-CcEEEEEce
Confidence 865544443211 10 13689999999876 44458776 3666666665543 2334554432 356667777
No 60
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=71.97 E-value=5.7 Score=40.91 Aligned_cols=48 Identities=17% Similarity=0.110 Sum_probs=37.5
Q ss_pred EecceeEeccccEEEeeeEEeee----------------ccccE-EEe-eeeeEEEeeeeeeeccc
Q 013493 148 RGGGIFVIDSARIRINNCFFLHF----------------TTQGI-LVQ-RGHETFISSCFLGQRST 195 (442)
Q Consensus 148 ~~~GIt~~NSq~~~I~Nc~~~~f----------------NTDGI-hI~-~S~~V~I~nS~Igq~~t 195 (442)
...+|.+..|..+.|+.|.|..- ..||. .+. .++.|+|++|.|.+|..
T Consensus 188 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k 253 (416)
T 1vbl_A 188 EYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDK 253 (416)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEE
T ss_pred CCceEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCc
Confidence 45788888889999999998742 35774 344 68999999999998764
No 61
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=67.13 E-value=8.7 Score=39.29 Aligned_cols=48 Identities=15% Similarity=0.164 Sum_probs=37.3
Q ss_pred EecceeEeccccEEEeeeEEeee----------------ccccE-EEe-eeeeEEEeeeeeeeccc
Q 013493 148 RGGGIFVIDSARIRINNCFFLHF----------------TTQGI-LVQ-RGHETFISSCFLGQRST 195 (442)
Q Consensus 148 ~~~GIt~~NSq~~~I~Nc~~~~f----------------NTDGI-hI~-~S~~V~I~nS~Igq~~t 195 (442)
...+|++..|..+.||.|.|..- ..||. .+. .++.|+|++|.|.+|..
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k 247 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDK 247 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEE
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCc
Confidence 45788888888899999988742 35774 444 58999999999998763
No 62
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=63.68 E-value=40 Score=34.62 Aligned_cols=132 Identities=12% Similarity=0.185 Sum_probs=78.9
Q ss_pred eEEEcccee-EEEEEEEecccc---------c------cceeeEEEeecccceeeeeeeeecc-----------------
Q 013493 230 GVLLRGQAN-IVTRVHCYNKAT---------A------FGGIGILVKLADAALTRIDNCYLDY----------------- 276 (442)
Q Consensus 230 Gv~~~gq~~-~~~gvh~~n~~t---------~------~gg~gi~~~~~~~~~~ri~ncyld~----------------- 276 (442)
|+.+.+..| ||+++|+-+... + -.+=+|-+ .+.+.=|||.|.|..
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i--~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~ 226 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISI--EGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQ 226 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEE--ESCEEEEEESCEEECTTCCGGGSCEETTEECC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEe--cCCceEEEEccEEecCCCcccccccccCccee
Confidence 566666555 579999965321 1 12345554 578889999999973
Q ss_pred --cce--eeeCCeEEEEEceEEeecceeEeeecc-c--e---eeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEec
Q 013493 277 --TGI--VLEDPVQVHVTNGFFLGDANIVLKSIK-G--R---ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIER 346 (442)
Q Consensus 277 --~~i--v~~dp~~~~i~~~~flgd~~i~l~~~~-~--~---~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~~ 346 (442)
-++ +-.+.--++||+++|-+--...|=--. . . -.-+++-+|.|.+. ..-.|.++- |.++-++.++-+.
T Consensus 227 ~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~-~~R~Pr~R~-G~~Hv~NN~~~n~ 304 (416)
T 1vbl_A 227 QHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV-TQRLPRVRF-GQVHIYNNYYEFS 304 (416)
T ss_dssp CCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE-EECSSEESS-CEEEEESCEEEEC
T ss_pred ecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC-ccCCccccc-ceEEEEcceEECC
Confidence 233 244677899999999875443332211 1 0 12399999999876 334488752 6666666665432
Q ss_pred cc-----ccceeeeeeeeeeeeccC
Q 013493 347 NN-----VNGMSLKSTAGKLSVAGN 366 (442)
Q Consensus 347 n~-----~~gm~~~~t~~~~~~~~~ 366 (442)
.. ..++.. +.-++..+++|
T Consensus 305 ~~~~~~~~ya~g~-~~~~~i~~E~N 328 (416)
T 1vbl_A 305 NLADYDFQYAWGV-GVFSQIYAQNN 328 (416)
T ss_dssp TTSSSCCCCSEEE-ETTCEEEEESC
T ss_pred CCCcccceeEecc-CCCcEEEEECC
Confidence 21 133332 22456666777
No 63
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=63.55 E-value=1e+02 Score=30.52 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=19.8
Q ss_pred EEEEEceEEeecceeEeeeccc-eeeeeEEeeeeccCC
Q 013493 286 QVHVTNGFFLGDANIVLKSIKG-RISGLTIVENMFNGS 322 (442)
Q Consensus 286 ~~~i~~~~flgd~~i~l~~~~~-~~~g~~i~~n~f~g~ 322 (442)
++|+-|++|.+-.. .++.+ .=.-+.+.+|.|...
T Consensus 215 ~~Hv~NN~~~n~~~---~~~~~~~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 215 DVHMFNNYFKDIND---TAINSRVGARVFVENNYFDNV 249 (326)
T ss_dssp EEEEESCEEEEESS---CSEEEETTCEEEEESCEEEEE
T ss_pred cEEEEccEEECCCc---eEEeecCCcEEEEEceEEECC
Confidence 56777777775432 12221 113467888888854
No 64
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=63.37 E-value=55 Score=34.43 Aligned_cols=110 Identities=12% Similarity=0.161 Sum_probs=59.4
Q ss_pred EEEec-CCCceeeEEEEEeee-----EeEEEccceeEEEEEEEecccc--ccceeeEEEeecccceeeeeeeeeccccee
Q 013493 209 AIDLA-SNDNAITDVTIFSAA-----IGVLLRGQANIVTRVHCYNKAT--AFGGIGILVKLADAALTRIDNCYLDYTGIV 280 (442)
Q Consensus 209 gI~l~-gnd~~itDv~i~~a~-----~Gv~~~gq~~~~~gvh~~n~~t--~~gg~gi~~~~~~~~~~ri~ncyld~~~iv 280 (442)
+|-|. ++++.|.+=+|.+.. -||.+-++...+++=+|.++.. .-.+-||.+. .|.. |. .
T Consensus 267 gi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~~~~I~nN~f~~~~g~~~~~~~GI~i~-~G~~-----~~-----~-- 333 (506)
T 1dbg_A 267 TMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSRHVIACNYFELSETIKSRGNAALYLN-PGAM-----AS-----E-- 333 (506)
T ss_dssp EEEEEECSSCEEESCEEEECSSSSCBCCEEECSBSCEEESCEEEESSBCGGGTSEEEEEC-CBCT-----TS-----T--
T ss_pred cEEEeecCccEEECCEEECCcCccCceEEEEECCCCEEECCEEECCcCccccccccEEEe-cCCC-----cc-----c--
Confidence 45555 666666666665543 6677766666777766666642 2222344443 1110 00 0
Q ss_pred eeCCeEEEEEceEEeecce--eEee----------e----ccceeeeeEEeeeeccCCCCCCccEEE
Q 013493 281 LEDPVQVHVTNGFFLGDAN--IVLK----------S----IKGRISGLTIVENMFNGSPARNVPIIK 331 (442)
Q Consensus 281 ~~dp~~~~i~~~~flgd~~--i~l~----------~----~~~~~~g~~i~~n~f~g~~~~~~~iv~ 331 (442)
...+....|+++-|++... |.|. + -.-.-..+.+.+|.+-+......|+..
T Consensus 334 ~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p~~~~~~nN~i~~~~~~~~~~~~ 400 (506)
T 1dbg_A 334 HALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETPHQLMLKGNLFFKDKPYVYPFFK 400 (506)
T ss_dssp TCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCCCSEEEESCEEECCSSCCCCSEE
T ss_pred cccccCcEEECCEEECCccccEEEcccccccccccccccccccCCCcEEEEccEEEcCCCccccccc
Confidence 1223557777777777763 6666 1 112334577777777766333345555
No 65
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=53.24 E-value=62 Score=32.99 Aligned_cols=112 Identities=9% Similarity=0.165 Sum_probs=70.1
Q ss_pred eEEEccceeEEEEEEEecccc---------c------cceeeEEEeecccceeeeeeeeecc------------------
Q 013493 230 GVLLRGQANIVTRVHCYNKAT---------A------FGGIGILVKLADAALTRIDNCYLDY------------------ 276 (442)
Q Consensus 230 Gv~~~gq~~~~~gvh~~n~~t---------~------~gg~gi~~~~~~~~~~ri~ncyld~------------------ 276 (442)
|+.+.+.--||+++|+-+... + -.+=+|-+ .+.+.=|||.|.|..
T Consensus 144 gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i--~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 144 NFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITI--NGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp EEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEE--ESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred EEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEe--cCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 566666333679999965321 1 13345554 467888999999973
Q ss_pred -cce--eeeCCeEEEEEceEEeecceeEeeecc-ce-----eeeeEEeeeeccCCCCCCccEEEecCCcceeeEEEEe
Q 013493 277 -TGI--VLEDPVQVHVTNGFFLGDANIVLKSIK-GR-----ISGLTIVENMFNGSPARNVPIIKLDGEFSNIDQVVIE 345 (442)
Q Consensus 277 -~~i--v~~dp~~~~i~~~~flgd~~i~l~~~~-~~-----~~g~~i~~n~f~g~~~~~~~iv~l~g~f~~i~~v~v~ 345 (442)
-++ +-.+.--++||+++|-+-....|=--. .. -..+++.+|.|.+. ..-.|.++ -|.|+-++.++.+
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~-~~R~Pr~R-~G~~Hv~NN~~~n 297 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI-VQAAPRVR-FGQVHVYNNYYEG 297 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE-EECTTEES-SCEEEEESCEEEC
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC-cccCCCcc-cceEEEEcceEEC
Confidence 222 334677899999999875443332211 00 12599999999876 33448875 3666666666543
No 66
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=51.85 E-value=55 Score=33.80 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=73.0
Q ss_pred ecceeEec-cccEEEeeeEEeeecccc--EEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEec-CCCceeeEEEE
Q 013493 149 GGGIFVID-SARIRINNCFFLHFTTQG--ILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLA-SNDNAITDVTI 224 (442)
Q Consensus 149 ~~GIt~~N-Sq~~~I~Nc~~~~fNTDG--IhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~-gnd~~itDv~i 224 (442)
+.||.+.. |++..|.++.+ ....|| |++..+++..|++-.+-.+ .--||.++ ++++.+++=.+
T Consensus 206 GNgI~L~G~~~~~~I~~N~i-~~~~dG~gIyl~ns~~~~I~~N~i~~~------------~R~gIh~m~s~~~~i~~N~f 272 (410)
T 2inu_A 206 GNCVELTGAGQATIVSGNHM-GAGPDGVTLLAENHEGLLVTGNNLFPR------------GRSLIEFTGCNRCSVTSNRL 272 (410)
T ss_dssp SEEEEECSCEESCEEESCEE-ECCTTSEEEEEESEESCEEESCEECSC------------SSEEEEEESCBSCEEESCEE
T ss_pred CCceeeccccccceEeccee-eecCCCCEEEEEeCCCCEEECCCcccC------------cceEEEEEccCCCEEECCEE
Confidence 34666656 77777877755 345666 9999999999998877411 13678887 77889999999
Q ss_pred EeeeEeEEE-c--cceeEEEEEEEeccccc--------cc---eeeEEEee
Q 013493 225 FSAAIGVLL-R--GQANIVTRVHCYNKATA--------FG---GIGILVKL 261 (442)
Q Consensus 225 ~~a~~Gv~~-~--gq~~~~~gvh~~n~~t~--------~g---g~gi~~~~ 261 (442)
.+-..|+.+ - .+.+.+++=||+....+ -| .-||+++-
T Consensus 273 ~~~~~Gi~~M~s~~~~n~v~~N~f~~~~~g~a~M~s~~~~~d~~~Gill~~ 323 (410)
T 2inu_A 273 QGFYPGMLRLLNGCKENLITANHIRRTNEGYPPFIGRGNGLDDLYGVVHIA 323 (410)
T ss_dssp EESSSCSEEEESSCBSCEEESCEEEEECCCSGGGTTCCCSCCTTSCSEEEE
T ss_pred ecceeEEEEEEcCCCCCEEECCEEeccCCceeeeeccCCCCCccEeeEEEe
Confidence 988888776 3 46888998888877665 22 16888874
No 67
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=38.98 E-value=3.1e+02 Score=27.36 Aligned_cols=126 Identities=19% Similarity=0.225 Sum_probs=68.4
Q ss_pred ccccEEEeeeeeEEEeeeeeeeccccCCCCCCcCcceEEEEecCCCceeeEEEEEeeeEeEEEccceeEEEEEEEecccc
Q 013493 171 TTQGILVQRGHETFISSCFLGQRSTVGGDPGEKGFSGTAIDLASNDNAITDVTIFSAAIGVLLRGQANIVTRVHCYNKAT 250 (442)
Q Consensus 171 NTDGIhI~~S~~V~I~nS~Igq~~t~gg~~~e~~~~gtgI~l~gnd~~itDv~i~~a~~Gv~~~gq~~~~~gvh~~n~~t 250 (442)
.-|+|.+..++.|-|-+|.+... .|. -|++. -....-++++.+|.+...
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~----~Dg--------~idi~-------------------~~s~~vTISnn~f~~h~k 163 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNG----NDG--------AVDIK-------------------KYSNYITVSWNKFVDHDK 163 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESC----SSC--------SEEEE-------------------TTCEEEEEESCEEESCSB
T ss_pred CCCeEEEecCCcEEEEeeeeccC----Ccc--------ceEEe-------------------cCCceEEEECcEeccCce
Confidence 57999999999999999999832 111 01111 112334555555555432
Q ss_pred ccceeeEEEeecc---------cceeeeeeeeecccceeeeCCe----EEEEEceEEeecc------e-eEeeecccee-
Q 013493 251 AFGGIGILVKLAD---------AALTRIDNCYLDYTGIVLEDPV----QVHVTNGFFLGDA------N-IVLKSIKGRI- 309 (442)
Q Consensus 251 ~~gg~gi~~~~~~---------~~~~ri~ncyld~~~iv~~dp~----~~~i~~~~flgd~------~-i~l~~~~~~~- 309 (442)
.. |+-... -.+--+.++|++ ...-.-|. ++|+-|++|.++. + .-.-++.+..
T Consensus 164 ~~-----LiG~sd~~~~~~d~g~~~vT~hhN~f~--~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~ 236 (340)
T 3zsc_A 164 VS-----LVGSSDKEDPEQAGQAYKVTYHHNYFK--NLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG 236 (340)
T ss_dssp CC-----EECCCTTSCHHHHHHSCEEEEESCEEE--SCCBCTTEEESSEEEEESCEEECCCCCSCSSCCSCCEEEEEETT
T ss_pred ee-----EeCcCCCCccccccCCcEEEEECeEec--CCCCCCCcccCCeEEEEccEEECCccccccccceeeeeEecCCC
Confidence 21 211110 012334455553 33344453 6899999999821 1 2233554322
Q ss_pred eeeEEeeeeccCCCC------CCccEEEecC
Q 013493 310 SGLTIVENMFNGSPA------RNVPIIKLDG 334 (442)
Q Consensus 310 ~g~~i~~n~f~g~~~------~~~~iv~l~g 334 (442)
.-+.+.+|.|....+ --.|+...++
T Consensus 237 a~i~~E~N~F~~~~~~~~~~~~~~p~~~~~~ 267 (340)
T 3zsc_A 237 AKVHVEGNYFMGYGAVMAEAGIAFLPTRIMG 267 (340)
T ss_dssp CEEEEESCEEECSCHHHHHTTCCBEEEEECT
T ss_pred CEEEEECcEEECCCcccccccccccccccCC
Confidence 457888999997622 1237776654
No 68
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=37.62 E-value=3e+02 Score=26.94 Aligned_cols=57 Identities=11% Similarity=0.139 Sum_probs=31.7
Q ss_pred eeeEEEecce---EecceeEe-----ccccEEEeeeEEeee---cc-------cc-EEEe-eeeeEEEeeeeeeecc
Q 013493 138 FRDVLFDSGF---RGGGIFVI-----DSARIRINNCFFLHF---TT-------QG-ILVQ-RGHETFISSCFLGQRS 194 (442)
Q Consensus 138 ~rnl~~D~n~---~~~GIt~~-----NSq~~~I~Nc~~~~f---NT-------DG-IhI~-~S~~V~I~nS~Igq~~ 194 (442)
+|+|.|..-. ...+|.+. +|+.+.||.|.|..- +. || |.+. .++.|+|++|.|.+|.
T Consensus 99 Irnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~ 175 (330)
T 2qy1_A 99 IQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQ 175 (330)
T ss_dssp EESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEE
T ss_pred EeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCC
Confidence 4555444311 24556666 566777777776421 11 43 3444 3677777777776554
No 69
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=31.22 E-value=4e+02 Score=26.45 Aligned_cols=58 Identities=10% Similarity=0.103 Sum_probs=39.4
Q ss_pred eeeEEEec----ceEecceeEeccccEEEeeeEEeee-----c-------ccc-EEE-eeeeeEEEeeeeeeeccc
Q 013493 138 FRDVLFDS----GFRGGGIFVIDSARIRINNCFFLHF-----T-------TQG-ILV-QRGHETFISSCFLGQRST 195 (442)
Q Consensus 138 ~rnl~~D~----n~~~~GIt~~NSq~~~I~Nc~~~~f-----N-------TDG-IhI-~~S~~V~I~nS~Igq~~t 195 (442)
+|+|.|.. .....+|.+..|..+.||.|.|..- . -|| +.+ ..++.|+|++|.|.+|..
T Consensus 115 Irnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k 190 (353)
T 1air_A 115 VQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKK 190 (353)
T ss_dssp EESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEE
T ss_pred EeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCc
Confidence 56665543 1234678888888899999988643 1 155 344 468899999999997754
No 70
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=30.55 E-value=37 Score=35.56 Aligned_cols=57 Identities=19% Similarity=0.218 Sum_probs=31.9
Q ss_pred ceeeEEEEE-eeeEeEEEccceeEEEEEEEeccccccceeeEEEeecccce---eeeeeeeeccc
Q 013493 217 NAITDVTIF-SAAIGVLLRGQANIVTRVHCYNKATAFGGIGILVKLADAAL---TRIDNCYLDYT 277 (442)
Q Consensus 217 ~~itDv~i~-~a~~Gv~~~gq~~~~~gvh~~n~~t~~gg~gi~~~~~~~~~---~ri~ncyld~~ 277 (442)
+.|.+.+.. +-.+|+++-||-+++++|..+-|+ |-|+|++-.+-.. |-|++-|+++.
T Consensus 310 Hii~Ni~~~~~lGVG~~~DG~~~~v~ni~~~dca----g~G~~~~~~~~~ftNitvI~~N~~~~~ 370 (543)
T 3riq_A 310 HIIRNIITRDCMGIGAWWDGQKNIIDNVVTYEAH----KEGMFDRGTNNDITNITVVCANKDLTN 370 (543)
T ss_dssp CEEEEEEEESCSSCSSEECSSSCEEEEEEEESCS----SCSEEECSSSCEEEEEEEESCSTTCSS
T ss_pred hhhhhhheeccceeeeeecCCCCeEeeEEeeccc----cCcceeeccCcceeeEEEEeccccCCC
Confidence 455555544 555666666666666666666664 5566665433332 23444555553
No 71
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=27.84 E-value=83 Score=32.59 Aligned_cols=43 Identities=19% Similarity=0.341 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhccCCCcccccccccCCceEEEecCceEEEeceEEeCCCCcceEE
Q 013493 25 DAILQALNDAFNVQSGLELLPGVKDLGGVIIDFQGGNYKISKPIRFPPGVGNVVV 79 (442)
Q Consensus 25 ~AfqkAw~dAc~~~~~st~~~G~~~lGga~V~lPgGtYlIs~pI~f~pc~gni~i 79 (442)
+-||+|+++|....+. ...+|+|.+|+|. ..|..+..+.+|++
T Consensus 90 ~TIqeAVdaap~~~~~----------~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL 132 (422)
T 3grh_A 90 TTIQAAVDAAIIKRTN----------KRQYIAVMPGEYQ--GTVYVPAAPGGITL 132 (422)
T ss_dssp SSHHHHHHHHHTTCCS----------SCEEEEECSEEEE--SCEEECCCSSCEEE
T ss_pred CCHHHHHHhchhcCCC----------ccEEEEEeCCeEe--eeEEecCCCCcEEE
Confidence 4588888877432111 1257999999997 46888766677764
No 72
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=23.12 E-value=53 Score=33.19 Aligned_cols=68 Identities=21% Similarity=0.224 Sum_probs=41.5
Q ss_pred cCcceEEEEecCCCceeeEEEEEe----eeEeEEEccceeEEEEEEEeccc-----cccceeeEEEee--cc--cceeee
Q 013493 203 KGFSGTAIDLASNDNAITDVTIFS----AAIGVLLRGQANIVTRVHCYNKA-----TAFGGIGILVKL--AD--AALTRI 269 (442)
Q Consensus 203 ~~~~gtgI~l~gnd~~itDv~i~~----a~~Gv~~~gq~~~~~gvh~~n~~-----t~~gg~gi~~~~--~~--~~~~ri 269 (442)
+.|+|+ ++|+.+.|+++.+.. +.+|.+ . -+++++++-|.. ...|.++=++.. ++ .....|
T Consensus 96 ~~F~G~---FDG~ghtI~nL~i~~~~~~GLFg~i-~---g~I~Nl~l~~~~i~g~~~~~G~laG~vg~~~~g~~~n~gtI 168 (363)
T 3n6z_A 96 FPYEID---FDGDSHVIKNFKCSAGDYPSFFGVL-C---GDCRNVGFVNASVSSARQGIGIITGYLGLKDKGNGNKTGRI 168 (363)
T ss_dssp CCCCEE---EEEEEEEEESCEECSSSSCSSSSEE-C---EEEEEEEEEEEEEECSSSCEESSEEEESCSSCSSGGGCEEE
T ss_pred CceEEE---ECCCCeEEeeeEcCCCCceeEEEEe-e---EEEEEEEEEeeeEeccceecceeeeeecccccccccCceEE
Confidence 457774 788889999988853 356665 2 268888877643 223333334331 10 146899
Q ss_pred eeeeeccc
Q 013493 270 DNCYLDYT 277 (442)
Q Consensus 270 ~ncyld~~ 277 (442)
.|||..-+
T Consensus 169 ~Nc~~tGs 176 (363)
T 3n6z_A 169 VNCYTTGE 176 (363)
T ss_dssp ESCEEEEE
T ss_pred EEeEEeee
Confidence 99997543
No 73
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=20.14 E-value=6.6e+02 Score=25.06 Aligned_cols=22 Identities=9% Similarity=0.265 Sum_probs=19.9
Q ss_pred ccccEEEee-eeeEEEeeeeeee
Q 013493 171 TTQGILVQR-GHETFISSCFLGQ 192 (442)
Q Consensus 171 NTDGIhI~~-S~~V~I~nS~Igq 192 (442)
+-|+|.+.. ++.|-|-+|.|..
T Consensus 142 ~~DaI~i~~~s~nVWIDHcs~s~ 164 (361)
T 1pe9_A 142 EWDAMNITNGAHHVWIDHVTISD 164 (361)
T ss_dssp CCCSEEEETTCEEEEEESCEEEC
T ss_pred CCceEEeecCCceEEEEccEeec
Confidence 469999999 9999999999983
Done!