BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013495
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Rattus norvegicus GN=Etfdh PE=2 SV=1
Length = 616
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/444 (56%), Positives = 318/444 (71%), Gaps = 15/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L LV W+G +AE LGVE+YPG+AA+E+LY D V GI TND+GI KDG+ K F+RG+
Sbjct: 175 LGHLVSWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPKTTFERGL 234
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
EL ++T+ AEGC G L+++ K F LR AQ TY +G+KE+W IDE K PG + H
Sbjct: 235 ELHAKVTIFAEGCHGHLAKQFYKKFDLRASCDAQ--TYGIGLKELWVIDEKKWKPGRVDH 292
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
T+GWPLD+ TYGGSFLYH+N+ + +A+G VV L+Y NP+L+P+ EFQ++KHHP+I+P L
Sbjct: 293 TVGWPLDRHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSPFREFQRWKHHPSIRPTL 352
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR LNEGGLQSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG LAAEA
Sbjct: 353 EGGKRIAYGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGSLAAEA 412
Query: 250 GFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGL 299
F L ++ ++ Y D L++SWVW+EL RN RP+ G+ G+ G+
Sbjct: 413 IFKQLTSENLQSKTAGLHVTEYEDNLKQSWVWKELHAVRNIRPSCHGILGVYGGMIYTGI 472
Query: 300 EHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQ 359
++ILRG P+TLKH D E A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQ
Sbjct: 473 FYWILRGMEPWTLKHKGSDSEQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 532
Query: 360 PAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKLQINAQNCLHCKACD 418
PAHL L+D IP NL Y GPE R+CPA VYE+VP E+ + +LQINAQNC+HCK CD
Sbjct: 533 PAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCD 592
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP QNI W VPEGGGGP Y+ M
Sbjct: 593 IKDPSQNINWVVPEGGGGPAYNGM 616
>sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2
Length = 617
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/444 (56%), Positives = 320/444 (72%), Gaps = 15/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L LV W+G +AE LGVE+YPG+AA+E+L+ D V GI TND+GI KDG+ K F+RG+
Sbjct: 176 LGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGL 235
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
EL ++T+ AEGC G L+++L K F LR ++ + QTY +G+KE+W IDE PG + H
Sbjct: 236 ELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKNWKPGRVDH 293
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
T+GWPLD+ TYGGSFLYH+N+ + +ALGLVV L+Y NP+L+P+ EFQ++KHHP+I+P L
Sbjct: 294 TVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTL 353
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR LNEGG QSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG+LAAE+
Sbjct: 354 EGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAES 413
Query: 250 GFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGL 299
F L ++ ++ Y D L+ SWVW+EL RN RP+ G+ G+ G+
Sbjct: 414 IFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGI 473
Query: 300 EHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQ 359
++ILRG P+TLKH D E A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQ
Sbjct: 474 FYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 533
Query: 360 PAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKLQINAQNCLHCKACD 418
PAHL LRD IP NL Y GPE R+CPA VYE+VP E+ + +LQINAQNC+HCK CD
Sbjct: 534 PAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCD 593
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP QNI W VPEGGGGP Y+ M
Sbjct: 594 IKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q5RDD3|ETFD_PONAB Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1
Length = 617
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/444 (56%), Positives = 320/444 (72%), Gaps = 15/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L LV W+G +AE LGVE+YPG+AA+E+L+ D V GI TND+GI KDG+ K F+RG+
Sbjct: 176 LGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPKATFERGL 235
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
EL ++T+ AEGC G L+++L K F LR ++ + QTY +G+KE+W IDE PG + H
Sbjct: 236 ELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKNWKPGRVDH 293
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
T+GWPLD+ TYGGSFLYH+N+ + +ALGLVV L+Y NP+L+P+ EFQ++KHHP+I+P L
Sbjct: 294 TVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQRWKHHPSIRPTL 353
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR LNEGG QSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG+LAAE+
Sbjct: 354 EGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAES 413
Query: 250 GFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGL 299
F L ++ ++ Y D L+ SWVW+EL RN RP+ G+ G+ G+
Sbjct: 414 IFNQLTSENLQSKTMGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGI 473
Query: 300 EHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQ 359
++ILRG P+TLKH D E A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQ
Sbjct: 474 FYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 533
Query: 360 PAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKLQINAQNCLHCKACD 418
PAHL LRD IP NL Y GPE R+CPA VYE+VP E+ + +LQINAQNC+HCK CD
Sbjct: 534 PAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCD 593
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP QNI W VPEGGGGP Y+ M
Sbjct: 594 IKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q921G7|ETFD_MOUSE Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1
Length = 616
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/444 (56%), Positives = 319/444 (71%), Gaps = 15/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L LV W+G +AE LGVE+YPG+AA+E+LY D V GI TND+GI KDG+ K F+RG+
Sbjct: 175 LGHLVSWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPKTTFERGL 234
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
EL ++T+ AEGC G L+++L K F LR AQ TY +G+KE+W IDE K PG + H
Sbjct: 235 ELHAKVTVFAEGCHGHLAKQLYKKFDLRASCDAQ--TYGIGLKELWIIDEKKWKPGRVDH 292
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
T+GWPLD+ TYGGSFLYH+N+ + +A+G VV L+Y NP+L+P+ EFQ++KHHP+I+P L
Sbjct: 293 TVGWPLDRHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTL 352
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR LNEGGLQSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG LAAE+
Sbjct: 353 EGGKRIAYGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGSLAAES 412
Query: 250 GFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGL 299
F L ++ ++ Y D L++SWVW+EL RN RP+ G+ G+ G+
Sbjct: 413 IFKQLTSENLQSKTTGLHVTEYEDNLKQSWVWKELHAVRNIRPSCHGILGVYGGMIYTGI 472
Query: 300 EHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQ 359
++ILRG P+TLKH D + A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQ
Sbjct: 473 FYWILRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 532
Query: 360 PAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKLQINAQNCLHCKACD 418
PAHL L+D IP NL Y GPE R+CPA VYE+VP E+ + +LQINAQNC+HCK CD
Sbjct: 533 PAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCD 592
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP QNI W VPEGGGGP Y+ M
Sbjct: 593 IKDPSQNINWVVPEGGGGPAYNGM 616
>sp|Q54XM6|ETFD_DICDI Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3
SV=1
Length = 606
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/448 (55%), Positives = 314/448 (70%), Gaps = 18/448 (4%)
Query: 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG 70
SL +VRWLG +AE +GVE+YP FAASE+LY + V GI TNDMGIAKDGS NF RG
Sbjct: 161 SLGNVVRWLGEQAESMGVEVYPSFAASEVLYHDNGAVRGIATNDMGIAKDGSLTSNFTRG 220
Query: 71 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEIL 130
+EL R+T+ AEGCRGSL++ L + F LR++ + QT+ LGIKE WEI KH G ++
Sbjct: 221 MELNARLTIFAEGCRGSLTKGLFEKFNLRDE--CEPQTFGLGIKETWEIKPEKHQQGLVI 278
Query: 131 HTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLE 190
HTLG+PL + GGSF+YH + + LGLVV L+Y NP+LNPY+EFQK K HP +K +LE
Sbjct: 279 HTLGYPLSDELLGGSFIYHAENNTVNLGLVVGLDYSNPYLNPYQEFQKLKLHPMVKDMLE 338
Query: 191 GGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAG 250
GGT +QYGART+NEGG QSIP VFPGGA++GC AGF++VPK+KG+H AMK+G+LAAEA
Sbjct: 339 GGTCIQYGARTINEGGFQSIPKLVFPGGALVGCTAGFVHVPKVKGSHYAMKTGILAAEAA 398
Query: 251 FGVL----------------HEDSNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGL 294
F L E + Y + L+KSWVW+EL+ RNYRP+ +G +PGL
Sbjct: 399 FPQLISQQEKEQEQEQDKPSVEPLLINEYPEELKKSWVWKELREVRNYRPSLHWGTIPGL 458
Query: 295 AICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTN 354
LE YI RG +P+TL +GKPD+E A IEY KPDG ++FD+ TS+ RS TN
Sbjct: 459 IYGALEMYIFRGHTPWTLSNGKPDNERLKPAAECKKIEYKKPDGQITFDLMTSVMRSGTN 518
Query: 355 HEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC 414
HE +QP HL++RD ++ + VN Y GPE R+CPA VYE+V EK + +L N+ CLHC
Sbjct: 519 HEENQPIHLKVRDMEVAKKVNRDIYDGPEGRFCPAGVYEWVEGEKGEKELVRNSVFCLHC 578
Query: 415 KACDIKDPKQNIKWTVPEGGGGPGYSVM 442
K CDIKDP QNI +TVPEGGGGP Y M
Sbjct: 579 KTCDIKDPTQNIDFTVPEGGGGPKYGAM 606
>sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1
Length = 617
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/444 (55%), Positives = 320/444 (72%), Gaps = 15/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L LV W+G +AE LGVE+YPG+AA+E+L+ D V GI TND+GI KDG+ K F+RG+
Sbjct: 176 LGHLVSWMGEQAEALGVEVYPGYAAAEVLFHEDGSVKGIATNDVGIQKDGAPKTTFERGL 235
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
EL ++T+ AEGC G L+++L + F LR ++ + QTY +G+KE+W IDE K PG + H
Sbjct: 236 ELHAKVTIFAEGCHGHLAKQLYRKFDLR--ANCEPQTYGIGLKELWVIDEKKWKPGRVDH 293
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
T+GWPLD+ TYGGSFLYH+N+ + +ALG VV L+Y NP+L+P+ EFQ++KHHP+I+P L
Sbjct: 294 TVGWPLDRHTYGGSFLYHLNEGEPLVALGFVVGLDYQNPYLSPFREFQRWKHHPSIQPTL 353
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR LNEGGLQ IP FPGG +IGC+ GF+NVPKIKGTHTAMKSG+LAAE+
Sbjct: 354 EGGKRIAYGARALNEGGLQCIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAAES 413
Query: 250 GFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGL 299
F L ++ ++ Y D L+KSWVW+EL RN RP+ G+ G+ G+
Sbjct: 414 IFNQLTNENLQSKTIGLDVTEYEDNLKKSWVWKELYAVRNIRPSCHSILGVYGGMIYTGI 473
Query: 300 EHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQ 359
++I RG P+TLKH D + A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQ
Sbjct: 474 FYWIFRGMEPWTLKHKGSDSDKLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 533
Query: 360 PAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKLQINAQNCLHCKACD 418
PAHL L+D +P NL Y GPE R+CPA VYE+VP E+ + +LQINAQNC+HCK CD
Sbjct: 534 PAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCD 593
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP QNI W VPEGGGGP Y+ M
Sbjct: 594 IKDPSQNINWVVPEGGGGPAYNGM 617
>sp|P55931|ETFD_PIG Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2
Length = 617
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/444 (55%), Positives = 318/444 (71%), Gaps = 15/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L LV W+G +AE LGVE+YPG+AA+EIL+ D V GI TND+GI KDG+ K F+RG+
Sbjct: 176 LGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGL 235
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
EL ++T+ AEGC G L+++L K F LR ++ + QTY +G+KE+W IDE K PG + H
Sbjct: 236 ELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKKWKPGRVDH 293
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
T+GWPLD+ TYGGSFLYH+N+ + +ALG VV L+Y NP+L+P+ EFQ++KHHP+IKP L
Sbjct: 294 TVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTL 353
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR LNEGG QSIP FPGG +IGC+ GF+NVPKIKGTHTAMKSG LAAE+
Sbjct: 354 EGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAES 413
Query: 250 GFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGL 299
F L ++ ++ Y D L+ SWVW+EL RN RP+ G+ G+ G+
Sbjct: 414 IFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGI 473
Query: 300 EHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQ 359
++I RG P+TLKH D + A+ +PIEYPKPDG +SFD+ +S+ S TNHEHDQ
Sbjct: 474 FYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQ 533
Query: 360 PAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQLKLQINAQNCLHCKACD 418
PAHL L+D +P NL Y GPE R+CPA VYE+VP E+ + +LQINAQNC+HCK CD
Sbjct: 534 PAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCD 593
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP QNI W VPEGGGGP Y+ M
Sbjct: 594 IKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q11190|ETFD_CAEEL Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=1
SV=2
Length = 597
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/444 (52%), Positives = 307/444 (69%), Gaps = 17/444 (3%)
Query: 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV 71
L ++V+WLG +AE GVE++P AASE+LY+ D V GI T+D+GI KDG+ K+ F RG+
Sbjct: 158 LGKVVQWLGEQAEAAGVEVWPEIAASEVLYNEDGSVKGIATSDVGIGKDGAPKDGFARGM 217
Query: 72 ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILH 131
E + T+ AEGCRG LS++++ F LR +HA TY +G+KE+WEID KH PG + H
Sbjct: 218 EFHAKCTIFAEGCRGHLSKQVLDKFDLR--THAM--TYGIGLKELWEIDPAKHRPGYVEH 273
Query: 132 TLGWPLDQKTYGGSFLYHMNDRQ---IALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPL 188
T+GWPL+ YGGSFLYH+ D+ +++G VVAL+Y NP LNPY+EFQK+K HP+I
Sbjct: 274 TMGWPLNVDQYGGSFLYHIEDQGQPLVSVGFVVALDYANPNLNPYKEFQKYKTHPSISKQ 333
Query: 189 LEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAE 248
LEGG + YGAR LNEGG QSIP FPGG ++GC+AGFLNV K+KGTH AMKSGM+AAE
Sbjct: 334 LEGGKRIGYGARALNEGGFQSIPKLHFPGGCLVGCSAGFLNVAKLKGTHNAMKSGMVAAE 393
Query: 249 AGFGVLHEDS------NMEIYWDTLQKSWVWQELQRARNYRPAF--EYGLLPGLAICGLE 300
+ F + + + Y ++ ++V +EL+ RN RP+F G + GL G+
Sbjct: 394 SIFEDIQQKGEDVQTIDPATYDKNIRDTYVVKELKATRNIRPSFNTSLGYIGGLIYSGIF 453
Query: 301 HYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQP 360
+ RG P+TL HGK D+E + I+YPKPDG L+FD+ TS+ + TNH DQP
Sbjct: 454 YVFGRGIEPWTLGHGKKDNEKLIPVKDAKEIDYPKPDGKLTFDLLTSVSLTGTNHTEDQP 513
Query: 361 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLK--LQINAQNCLHCKACD 418
AHL L++ ++P VNL Y GPE+R+CPA VYE+VP E ++ K LQINAQNC+HCK CD
Sbjct: 514 AHLTLKNDQVPLDVNLAVYGGPEARFCPAGVYEFVPSEADESKKRLQINAQNCIHCKTCD 573
Query: 419 IKDPKQNIKWTVPEGGGGPGYSVM 442
IKDP+QNI W PEGGGGP Y M
Sbjct: 574 IKDPQQNINWVTPEGGGGPKYEGM 597
>sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CIR2 PE=1 SV=1
Length = 631
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/459 (49%), Positives = 305/459 (66%), Gaps = 30/459 (6%)
Query: 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG 70
SL+Q+V +LG KAEE+GVE+YPG A S+++YD +N V G+ T D GI+K G KE F+RG
Sbjct: 174 SLNQVVGYLGEKAEEVGVEVYPGIAVSDLIYDENNAVKGVITKDAGISKSGKPKETFERG 233
Query: 71 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEIL 130
+E R T+LAEGC GSL+++ + + LR+ QHQTY LGIKEVWE+ N G
Sbjct: 234 MEFWARQTVLAEGCHGSLTKQALAKYDLRKGR--QHQTYGLGIKEVWEVKPENFNKGFAA 291
Query: 131 HTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLE 190
HT+G+PL YGG F YH D + +GLVV L+Y NP+++PY+EFQK KHHP +LE
Sbjct: 292 HTMGYPLTNDVYGGGFQYHFGDGLVTVGLVVGLDYKNPYVSPYKEFQKMKHHPYYSKVLE 351
Query: 191 GGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA- 249
GG + Y AR LNEGGLQS+P FPGG ++G +AGF+NVPKIKGTHTAMKSG+LAAE+
Sbjct: 352 GGKCIAYAARALNEGGLQSVPKLNFPGGVLVGASAGFMNVPKIKGTHTAMKSGLLAAESI 411
Query: 250 -----GFGVLHE---------------DSNMEIYWDTLQKSWVWQELQRARNYRPAF--E 287
G VL E N+E Y ++S +++EL RN RP+F +
Sbjct: 412 FESIKGLPVLEEVEDEDAKMAMFDKEATINLESYESAFKESSIYKELYEVRNIRPSFSGK 471
Query: 288 YGLLPGLAICGLEHYILRGKSPYTLKHG-KPDHEATDAARLHSPIEYPKPDGVLSFDVPT 346
G G+ G++ IL+GK P+TLK K D E + A + PIEYPKPDGV+SFD+ T
Sbjct: 472 LGGYGGMIYSGIDSLILKGKVPWTLKFDEKNDGEILEPASKYKPIEYPKPDGVISFDILT 531
Query: 347 SLHRSNTNHEHDQPAHLRLRDPKIPELV--NLPEYAGPESRYCPARVYEYVPDEKNQL-- 402
S+ R+ T H+ D+P HLR+ + + + P + G ESR+CPA VYE+V DEK+ +
Sbjct: 532 SVSRTGTYHDDDEPCHLRVPGQDMVKYAERSFPVWKGVESRFCPAGVYEFVKDEKSPVGT 591
Query: 403 KLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSV 441
+LQIN+QNC+HCK CDIK P+Q+I W VPEGG GP Y++
Sbjct: 592 RLQINSQNCIHCKTCDIKAPRQDITWKVPEGGDGPKYTL 630
>sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1
Length = 632
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/440 (49%), Positives = 291/440 (66%), Gaps = 12/440 (2%)
Query: 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG 70
SL++ RWL KAEE GVEIYP FAASE+LY+ D VIG+ TND G+ G K+NF+RG
Sbjct: 195 SLAEFTRWLAAKAEEYGVEIYPSFAASEVLYNKDGSVIGVATNDFGVDSKGLPKDNFERG 254
Query: 71 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEIL 130
+ +TL AEG GSLS+ +IK F LR + + QTY LG+KEVW + + GE+
Sbjct: 255 MAFHAPVTLFAEGAHGSLSKSIIKRFNLR--GNCEPQTYGLGVKEVWRVPDENFRKGEVA 312
Query: 131 HTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLE 190
HTLGWP+ TYGG F+Y D + +GLVV L+Y NP+++P EFQ+ K +P +L+
Sbjct: 313 HTLGWPMRNDTYGGGFMYQFGDNYVTVGLVVGLDYPNPYVSPALEFQRMKQNPFFAKVLK 372
Query: 191 GGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAG 250
GG ++Y AR LNEGG Q+IP VFPGGA+IGC+AGF+NV KIKGTHTAMKSG++AA+A
Sbjct: 373 GGKCLEYAARALNEGGYQAIPKLVFPGGALIGCSAGFVNVAKIKGTHTAMKSGIVAADAI 432
Query: 251 FGVLHEDSN-----MEIYWDTLQKSWVWQELQRARNYRPAFE--YGLLPGLAICGLEHYI 303
D+ + Y + L+ ++V++EL RN RP+F G G+A +E Y+
Sbjct: 433 VDAFGRDAASKPLLLNDYEENLKNTYVFKELYSVRNIRPSFHSFLGNYGGMAYSAVEAYV 492
Query: 304 LRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHL 363
L+G+ P+TLKH D +AT +A + PI YPKPD VLSFD+PTS+ RS T H +QP HL
Sbjct: 493 LKGRVPWTLKHKGGDAKATKSASKYKPINYPKPDNVLSFDIPTSVSRSATMHAENQPCHL 552
Query: 364 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQL--KLQINAQNCLHCKACDIKD 421
PK + Y G E+++CPA VYEYV DE + + IN+QNC+HCK CDIKD
Sbjct: 553 FDHRPKDRKSC-FETYKGVENKFCPAGVYEYVNDEASSYGKRFVINSQNCVHCKTCDIKD 611
Query: 422 PKQNIKWTVPEGGGGPGYSV 441
P Q I+W P+GG GP Y++
Sbjct: 612 PLQGIQWKTPQGGDGPKYTL 631
>sp|Q9HZP5|ETFD_PSEAE Electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1
Length = 551
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/438 (51%), Positives = 289/438 (65%), Gaps = 8/438 (1%)
Query: 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQR- 69
SL L RWL +AE LGVEIYPGFAA E L D + V GI T D+G+ ++G+ KE +
Sbjct: 116 SLGNLCRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPKEGYYTP 175
Query: 70 GVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEI 129
G+ELR + TL AEGCRG + ++LIK + L ++ AQH Y +GIKE+W+ID KH PG +
Sbjct: 176 GMELRAKYTLFAEGCRGHIGKQLIKKYNLDSEADAQH--YGIGIKEIWDIDPSKHKPGLV 233
Query: 130 LHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
+HT GWPL+ + GGSFLYH+ + Q+ +GL++ L+Y NP L+P++EFQ++KHHP +K L
Sbjct: 234 VHTAGWPLNDENTGGSFLYHLENNQVFVGLIIDLSYSNPHLSPFDEFQRYKHHPVVKQYL 293
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG V YGAR + +GGL S+P VFPGGA+IGC G LN KIKG+HTAMKSGMLAA+A
Sbjct: 294 EGGKRVAYGARAICKGGLNSLPKMVFPGGALIGCDLGTLNFAKIKGSHTAMKSGMLAADA 353
Query: 250 GFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF-EYGLLPGLAICGLEHYIL 304
L + Y D + SW++ EL R+RN+ A ++G + G A ++ I
Sbjct: 354 IAEALAAGREGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKFGAIGGGAFNFIDQNIF 413
Query: 305 RGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLR 364
GK P TL KPD+ A I+YPKPDG LSFD +S+ SNTNHE DQP HL+
Sbjct: 414 GGKIPVTLHDDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSVFLSNTNHEEDQPIHLK 473
Query: 365 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQ 424
L D IP NLP Y P RYCPA VYE V ++ + QINAQNC+HCK CDIKDP Q
Sbjct: 474 LADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDDGSKRFQINAQNCVHCKTCDIKDPAQ 533
Query: 425 NIKWTVPEGGGGPGYSVM 442
NI W PEG GGP Y M
Sbjct: 534 NITWVAPEGTGGPNYPNM 551
>sp|P94132|ETFD_ACIAD Probable electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Acinetobacter sp. (strain ADP1) GN=etfD PE=4 SV=1
Length = 570
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/456 (49%), Positives = 280/456 (61%), Gaps = 29/456 (6%)
Query: 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG 70
SL +VRWLG KAEEL V I+PGFAA+EILY AD V GI T DMGI KDG NF G
Sbjct: 120 SLGNVVRWLGQKAEELEVSIFPGFAAAEILYHADGTVKGIQTGDMGIGKDGEPTHNFAPG 179
Query: 71 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEIL 130
EL + TL AEGCRG L ++LI F L + + QH Y +GIKE+WEID KH PG ++
Sbjct: 180 YELHAKYTLFAEGCRGHLGKRLINKFNLDQDADPQH--YGIGIKELWEIDPAKHKPGLVM 237
Query: 131 HTLGWPLDQK-TYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLL 189
H GWPL + + GG +LYH + Q+ LG++V L+Y NP + P+ E Q++K HP IK L
Sbjct: 238 HGSGWPLSETGSSGGWWLYHAENNQVTLGMIVDLSYENPHMFPFMEMQRWKTHPLIKQYL 297
Query: 190 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA 249
EGG + YGAR + +GGL S+P FPGG +IG AGFLN KIKG+HTAMKSGML EA
Sbjct: 298 EGGKRISYGARAVVKGGLNSLPKLTFPGGCLIGDDAGFLNFAKIKGSHTAMKSGMLCGEA 357
Query: 250 GFGVLHE--------------------DSNMEIYWDTLQKSWVWQELQRARNYRPAF-EY 288
F + D + Y KSW+ +EL R+RN+ PA ++
Sbjct: 358 VFEAIARGVDKGGDLAIARVVEGEDLFDKELTTYTQKFDKSWLKEELHRSRNFGPAMHKF 417
Query: 289 GLLPGLAICGLEHYILRGKSPYTLKHGKPDHEA--TDAARLHSPIEYPKPDGVLSFDVPT 346
GL G A ++ I K P+TL +PD+ A T P YPKPDG L+FD +
Sbjct: 418 GLWIGGAFNFVDQNIF--KVPFTLHDLQPDYSALKTQDQATFKP-NYPKPDGKLTFDRLS 474
Query: 347 SLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI 406
S+ SNT HE +QP+HL+L D IP VNLP + P RYCPA VYE V + + + QI
Sbjct: 475 SVFVSNTVHEENQPSHLKLTDASIPVAVNLPRWDEPAQRYCPAGVYEIVDEGEGNKRFQI 534
Query: 407 NAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 442
NA NC+HCK CDIKDP QNI W PEGGGGP Y M
Sbjct: 535 NAANCVHCKTCDIKDPSQNITWVTPEGGGGPNYPNM 570
>sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixC PE=3 SV=2
Length = 435
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 38/290 (13%)
Query: 8 NRKSL--SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 65
NR ++ +Q +W K +E G + +E++ DA KVIG+ T+
Sbjct: 101 NRYTIIRAQFDKWFSSKVKEAGATVLCETTVTELVQDAYGKVIGVKTD------------ 148
Query: 66 NFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDE 121
+ G ++ + +LAEG G L K LRE+ +H AL +KE+ E E
Sbjct: 149 --RSGGQIHADVVVLAEGVNGLLGTKA----HLRERPKPEH--VALAVKEMHFLPRETIE 200
Query: 122 GKHN----PGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEF 176
+ N G ++ G + + G F+Y N I+LG+ + ++ PY
Sbjct: 201 ARFNLQGDEGVVIEAAG-TISRGMTGMGFIY-ANKECISLGIGCLVSDFQKTGETPYGLL 258
Query: 177 QKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGT 236
++FK HP++ PL+EG V +Y A + EGG ++IP G ++G AA N +G+
Sbjct: 259 ERFKSHPSVAPLIEGSEVKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGS 318
Query: 237 HTAMKSGMLAAEAGFGVLHED-----SNMEIYWDTLQKSWVWQELQRARN 281
+ AM SG +AAEA F V N+ +Y L++S+V +++++ ++
Sbjct: 319 NLAMTSGRIAAEAIFQVKSRREPMSAKNLSLYKTMLEESFVLKDMKKYKD 368
>sp|P10331|FIXC_BRAJA Protein FixC OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixC
PE=3 SV=2
Length = 435
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 36/286 (12%)
Query: 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVE 72
+Q +W K E G + +E+ D N+V+G+ T+ +R E
Sbjct: 108 AQFDKWFSSKVREAGAIVLCETTVTELAQDDRNRVVGVRTD--------------RRDGE 153
Query: 73 LRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDEGKHN--- 125
+ + +LAEG G L + LR + + AL +KE+ E E + N
Sbjct: 154 IHADVVVLAEGVNGLLGTRA----GLRARPAPDN--VALAVKEMHFLPRETIEARFNLKG 207
Query: 126 -PGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQKFKHHP 183
G ++ G + + G F+Y N I+LG+ + ++ PY +FK HP
Sbjct: 208 DEGVVIEAAG-TISRGMTGMGFIY-ANKECISLGIGCLVADFQRTGQTPYGLLDEFKRHP 265
Query: 184 AIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 243
++ PL+ G V +Y A + EGG +SIP G ++G AA N +G++ AM SG
Sbjct: 266 SVAPLIAGSEVKEYSAHLIPEGGYKSIPQLYGEGWVVVGDAAQLNNAVHREGSNLAMTSG 325
Query: 244 MLAAEA-----GFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRP 284
+AAEA G +N+ IY L S+V ++L++ ++ P
Sbjct: 326 RIAAEAIGLVKSRGEPMSATNLSIYKKMLDDSFVIKDLKKYKDLPP 371
>sp|Q53208|FIXC_RHISN Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1
Length = 435
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 38/290 (13%)
Query: 8 NRKSL--SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 65
NR ++ +Q +W K G + +E+ DA KVIG+ T+ G
Sbjct: 101 NRYTIIRAQFDKWFSRKVRAAGAIVLCETTVTELALDAAGKVIGVHTDRAG--------- 151
Query: 66 NFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHN 125
GV + + +LAEG G L + R + + + AL +KE+ + E N
Sbjct: 152 ----GV-IHADVVVLAEGVNGLLGTRA------RFRKVPKPEAVALAVKEMHFLPEEVIN 200
Query: 126 P--------GEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFL-NPYEEF 176
G ++ G + + G FLY N I+LG+ +++ L +PY
Sbjct: 201 ERFGLTGDQGCVIEAAG-TISRGMAGLGFLY-TNKESISLGIGCLVSHFAATLESPYALL 258
Query: 177 QKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGT 236
FK+HP+I+PLL G + +Y A + EGG ++IP G ++G AA N +G+
Sbjct: 259 DAFKNHPSIRPLLAGSEIKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGS 318
Query: 237 HTAMKSGMLAAEAGFGVLHE-----DSNMEIYWDTLQKSWVWQELQRARN 281
+ AM SG +A EA + N+ +Y L KS+V ++L++ ++
Sbjct: 319 NLAMTSGRIAGEAIAAIKSRKHPMTSDNLSLYKAMLDKSFVLKDLRKYKD 368
>sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1
Length = 428
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 46/277 (16%)
Query: 1 MNYCHNGNRKSLSQLV---------RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 51
++YC NG S SQ+ WL +AEE G ++ G ++ D KV+G+
Sbjct: 88 IDYC-NGEDASASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVV-QRDGKVVGVE 145
Query: 52 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 111
+ G L ++ +LA+G L+EKL + ++ A H A+
Sbjct: 146 AD----------------GDILEAKVVILADGVNSLLAEKL----GMAKRVEASH--VAV 183
Query: 112 GIKEVWEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163
G+KE+ E+ + + N G G P D GG FLY N+ ++LGLV L
Sbjct: 184 GVKELIELPKSVIEDRFQLQGNEGAACLFAGAPTD-GLMGGGFLYT-NETTLSLGLVCGL 241
Query: 164 NYHNPFLNPY-EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 222
++ + + FK HPA+ PL+ GG +V+Y A + E G+ P V G I G
Sbjct: 242 HHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAG 301
Query: 223 CAAGF-LNVP-KIKGTHTAMKSGMLAAEAGFGVLHED 257
AAG +N+ I+G A+ +G AA+ + D
Sbjct: 302 DAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSAMKRD 338
>sp|Q8ZRW9|FIXC_SALTY Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixC PE=3 SV=1
Length = 428
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 46/277 (16%)
Query: 1 MNYCHNGNRKSLSQLV---------RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 51
++YC NG S SQ+ WL +AEE G ++ G ++ D KV+G+
Sbjct: 88 IDYC-NGEDASASQVSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNVV-QRDGKVVGVE 145
Query: 52 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 111
+ G L ++ +LA+G L+EKL + ++ A H A+
Sbjct: 146 AD----------------GDILEAKVVILADGVNSLLAEKL----GMTKRVEASH--VAV 183
Query: 112 GIKEVWEID--------EGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163
G+KE+ E+ + + N G G P D GG FLY N+ ++LGLV L
Sbjct: 184 GVKELIELPKLVIEDRFQLQGNEGAACLFAGAPTD-GLMGGGFLYT-NETTLSLGLVCGL 241
Query: 164 NYHNPFLNPY-EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 222
++ + + FK HPA+ PL+ GG +V+Y A + E G+ P V G I G
Sbjct: 242 HHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAG 301
Query: 223 CAAGF-LNVP-KIKGTHTAMKSGMLAAEAGFGVLHED 257
AAG +N+ I+G A+ +G AA+ + D
Sbjct: 302 DAAGMCMNLGFTIRGMDLAISAGEAAAKTVLSAMKRD 338
>sp|Q46904|YGCN_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YgcN
OS=Escherichia coli (strain K12) GN=ygcN PE=3 SV=2
Length = 423
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 124/279 (44%), Gaps = 46/279 (16%)
Query: 18 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 77
WL +AE+ GVE PG A + LY+ + +V G+ D LR R
Sbjct: 107 WLVAEAEKEGVECIPG-ATVDALYEENGRVCGVICGDD----------------ILRARY 149
Query: 78 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KHNPGEI 129
+LAEG L+E+ R A ALGIKEV ++ ++N G
Sbjct: 150 VVLAEGANSVLAER--HGLVTRPAGEAM----ALGIKEVLSLETSAIEERFHLENNEGAA 203
Query: 130 LHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEF-QKFKHHPAIKPL 188
L G D GG+FLY N + ++LG+V L+ P E +FK HPA++PL
Sbjct: 204 LLFSGRICDDLP-GGAFLY-TNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPL 261
Query: 189 LEGGTVVQYGARTLNEGGLQSIPYP------VFPGGAIIGCAAGFLNVPKIKGTHTAMKS 242
++ ++YGA + EGGL S+P + G A+ C ++V +G A+
Sbjct: 262 IKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISV---RGMDMALTG 318
Query: 243 GMLAAEAGFGVLH--EDSNM-EIYWDTLQKSWVWQELQR 278
AA+ E N+ +Y +++S +W LQR
Sbjct: 319 AQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQR 357
>sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1
Length = 428
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1 MNYCHNGNRKSLSQ----LVR-----WLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 51
M+YC NG+ S SQ ++R WL +AEE G ++ G L D KV+G+
Sbjct: 88 MDYC-NGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDN-LVQRDGKVVGVE 145
Query: 52 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 111
+ G + + LLA+G L+EKL +++ A+
Sbjct: 146 AD----------------GDVIEAKTVLLADGVNSILAEKLGMAKRVKPTD------VAV 183
Query: 112 GIKEVWEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163
G+KE+ E+ + + N G G P D GG FLY N+ ++LGLV L
Sbjct: 184 GVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGL 241
Query: 164 NY-HNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 222
++ H+ + + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G
Sbjct: 242 HHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAG 301
Query: 223 CAAGF 227
AAG
Sbjct: 302 DAAGM 306
>sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1
Length = 428
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1 MNYCHNGNRKSLSQ----LVR-----WLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 51
M+YC NG+ S SQ ++R WL +AEE G ++ G L D KV+G+
Sbjct: 88 MDYC-NGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDN-LVQRDGKVVGVE 145
Query: 52 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 111
+ G + + +LA+G L+EKL +++ A+
Sbjct: 146 AD----------------GDVIEAKTVILADGVNSILAEKLGMAKRVKPTD------VAV 183
Query: 112 GIKEVWEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163
G+KE+ E+ + + N G G P D GG FLY N+ ++LGLV L
Sbjct: 184 GVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGL 241
Query: 164 NY-HNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 222
++ H+ + + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G
Sbjct: 242 HHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAG 301
Query: 223 CAAGF 227
AAG
Sbjct: 302 DAAGM 306
>sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixC PE=3 SV=1
Length = 428
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1 MNYCHNGNRKSLSQ----LVR-----WLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 51
M+YC NG+ S SQ ++R WL +AEE G ++ G L D KV+G+
Sbjct: 88 MDYC-NGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDN-LVQRDGKVVGVE 145
Query: 52 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 111
+ G + + +LA+G L+EKL +++ A+
Sbjct: 146 AD----------------GDVIEAKTVILADGVNSILAEKLGMAKRVKPTD------VAV 183
Query: 112 GIKEVWEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163
G+KE+ E+ + + N G G P D GG FLY N+ ++LGLV L
Sbjct: 184 GVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGL 241
Query: 164 NY-HNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 222
++ H+ + + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G
Sbjct: 242 HHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAG 301
Query: 223 CAAGF 227
AAG
Sbjct: 302 DAAGM 306
>sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1
Length = 428
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 44/245 (17%)
Query: 1 MNYCHNGNRKSLSQ----LVR-----WLGGKAEELGVEIYPGFAASEILYDADNKVIGIG 51
M+YC NG+ S SQ ++R WL +AEE G ++ G L D KV+G+
Sbjct: 88 MDYC-NGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDN-LVQRDGKVVGVE 145
Query: 52 TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL 111
+ G + + +LA+G L+EKL +++ + A+
Sbjct: 146 AD----------------GDVIEAKTVILADGVNSILAEKLGMAKRVKPTN------VAV 183
Query: 112 GIKEVWEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163
G+KE+ E+ + + N G G P D GG FLY N+ ++LGLV L
Sbjct: 184 GVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGL 241
Query: 164 NY-HNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 222
++ H+ + + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G
Sbjct: 242 HHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAG 301
Query: 223 CAAGF 227
AAG
Sbjct: 302 DAAGM 306
>sp|P53572|FIXC_AZOVI Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1
Length = 427
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 43/285 (15%)
Query: 17 RWLGGKAEELGVEIYPGFAASEILYD---ADNKVIGIGTNDMGIAKDGSKKENFQRGVEL 73
+W KA E GV E +D KV+G+ T+ ++G E+
Sbjct: 110 QWFNKKAREAGV-----LTICETRHDLLIEGGKVVGVRTD--------------RQGGEV 150
Query: 74 RGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDEGKHNPGE- 128
R +LA+G L+ K F S Q + +AL +KE+ E E + N GE
Sbjct: 151 RADAVILADGVNSRLAVK--AGF-----SRDQPENWALAVKEIHFLPQETMEARFNIGEE 203
Query: 129 -ILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYHNPFLNPYEEFQKFKHHPAIK 186
+ +D G FLY N I LG+ L ++ ++PYE + K HP+I
Sbjct: 204 EAAIEMAGKIDAGMMGTGFLY-TNKESITLGVGCMLSDFKQQKISPYELLDRMKTHPSIA 262
Query: 187 PLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLA 246
PL+ G + +Y A + EGG +IP V+ G +I A + +G++ AM +GMLA
Sbjct: 263 PLIAGSDMKEYAAHLIPEGGYNAIP-QVYGDGWMIAGDAPIRHGIHREGSNLAMTTGMLA 321
Query: 247 AEAGFGVLHED-----SNMEIYWDTLQKSWVWQELQRARNYRPAF 286
A+ + D +N+ Y L S+V ++L++ R F
Sbjct: 322 AQTLVELRAADKPFSAANLAEYKKKLDDSFVMKDLKKYRRMPEIF 366
>sp|P09820|FIXC_RHIME Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1
Length = 435
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 34/282 (12%)
Query: 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVE 72
+Q +WL K E G + A+ + +D+ K IG+ T+ G
Sbjct: 108 AQFDKWLSRKVCEAGGTVLCETTATGLEWDSAGKAIGVRTDRAGDVVLADVVVL------ 161
Query: 73 LRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDE-------GKHN 125
AEG G L + LRE +++ AL +KE+ + E G
Sbjct: 162 --------AEGVNGLLGTRA----GLREMPKSKN--VALAVKELHFLPEEVIAERFGLTG 207
Query: 126 PGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQKFKHHPA 184
+ G + + G FLY N I+LG+ + N+ PY FK HP+
Sbjct: 208 DEGCVIEAGGTISRGMAGLGFLY-TNKESISLGIGCLISNFAETMERPYALLDAFKRHPS 266
Query: 185 IKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGM 244
I+PL+ G V +Y A + EGG +IP G ++G AA N +G++ AM SG
Sbjct: 267 IQPLIAGSEVKEYAAHLIPEGGFNAIPRLCGNGWVVVGDAAQLNNAVHREGSNLAMASGR 326
Query: 245 LAAEA-----GFGVLHEDSNMEIYWDTLQKSWVWQELQRARN 281
+A EA G + + +++ +Y L KS+V ++L + ++
Sbjct: 327 MAGEAISIIKSRGGVMDKASLSLYKTMLDKSFVVEDLSKQKD 368
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 128/289 (44%), Gaps = 48/289 (16%)
Query: 18 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 77
WL +AE+ G + PG ++ + NKV G+ D L +
Sbjct: 113 WLMEQAEQAGAQFIPGVRVDALVREG-NKVTGVQAGD----------------DILEANV 155
Query: 78 TLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNP--------GEI 129
+LA+G L ++ + S H YA+G+KEV + + N G
Sbjct: 156 VILADGVNSMLG----RSLGMVPASDPHH--YAVGVKEVIGLTPEQINDRFNITGEEGAA 209
Query: 130 LHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYHNPFLNPYEEFQKFKHHPAIKPL 188
G P D GG FLY N I+LGLV L + + + + + FK HPAI+PL
Sbjct: 210 WLFAGSPSD-GLMGGGFLY-TNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPL 267
Query: 189 LEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF-LNVP-KIKGTH------TAM 240
+ GG +++Y A + EGGL +P V G I+G AAGF LN+ ++G A
Sbjct: 268 ISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAA 327
Query: 241 KSGMLAAE--AGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAFE 287
+ ++AA+ A F S++ Y L++S V +++Q R E
Sbjct: 328 ATTVIAAKERADFSA----SSLAQYKRELEQSCVMRDMQHFRKIPALME 372
>sp|P09821|FIXC_RHILE Protein FixC (Fragment) OS=Rhizobium leguminosarum GN=fixC PE=3
SV=1
Length = 163
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 191 GGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAG 250
G + +Y A + EGG ++IP G ++G AA N +G++ AM SG++A EA
Sbjct: 1 GSEIKEYAAHLIPEGGFKAIPQLFGNGWVVVGDAAQLNNAVHREGSNLAMTSGLMAGEAI 60
Query: 251 F-----GVLHEDSNMEIYWDTLQKSWVWQELQRARN 281
F G L N+ +Y L KS+V ++L + ++
Sbjct: 61 FQIKSRGGLMTKRNLSLYKGMLGKSFVMKDLMKHKD 96
>sp|P26485|FIXX_AZOC5 Ferredoxin-like protein OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=fixX PE=4 SV=1
Length = 97
Score = 42.0 bits (97), Expect = 0.010, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 361 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACD-I 419
AH+++R P P + CPAR YE +E Q+++ ++ C+ C C I
Sbjct: 24 AHIKVRPHTEP-----PPALLSMLKLCPARCYEL--NEAGQVEVTVDG--CVECGTCRVI 74
Query: 420 KDPKQNIKWTVPEGGGG 436
+P +I+WT P GG G
Sbjct: 75 AEPSGDIEWTYPRGGFG 91
>sp|P10326|FIXX_BRAJA Ferredoxin-like protein OS=Bradyrhizobium japonicum (strain USDA
110) GN=fixX PE=4 SV=1
Length = 98
Score = 38.5 bits (88), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 362 HLRLRDPKIP--ELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACD- 418
H+R+R K P +L+ L + CPAR YE + ++++ C+ C C
Sbjct: 26 HVRVRAHKTPSPQLLTL-------LKACPARCYEL----NDNGQVEVTVDGCIECGTCRV 74
Query: 419 IKDPKQNIKWTVPEGGGG 436
I +P +I+W+ P GG G
Sbjct: 75 IAEPTGDIEWSHPRGGYG 92
>sp|P08710|FIXX_RHILT Ferredoxin-like protein OS=Rhizobium leguminosarum bv. trifolii
GN=fixX PE=4 SV=1
Length = 98
Score = 37.4 bits (85), Expect = 0.26, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 384 SRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIK-DPKQNIKWTVPEGGGG 436
++ CPA+ Y+ ++ ++ I + CL C C++ P +I+WT P GG G
Sbjct: 43 TQVCPAKCYQL----NDRRQVIIVSDGCLECGTCNVLCGPDGDIEWTYPRGGFG 92
>sp|B9DQ42|PUR9_STACT Bifunctional purine biosynthesis protein PurH OS=Staphylococcus
carnosus (strain TM300) GN=purH PE=3 SV=1
Length = 492
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 22 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 81
KA ELG ++ P ++ I+ D++ +GIG M + GS + +R +E+ + L++
Sbjct: 381 KAMELGWKVVPSVKSNAIILSNDHQTVGIGAGQMN--RVGSAEIAIERAIEINDNVALVS 438
Query: 82 EG 83
+G
Sbjct: 439 DG 440
>sp|P09823|FIXX_RHILE Ferredoxin-like protein OS=Rhizobium leguminosarum GN=fixX PE=4
SV=1
Length = 98
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 384 SRYCPARVYEYVPDEKNQL-KLQINAQNCLHCKACDI-KDPKQNIKWTVPEGGGG 436
++ CPA+ YE N++ ++ I + CL C C + + +IKW P GG G
Sbjct: 43 TQICPAKCYEV-----NEIGQVAIVSDGCLECGTCRVLAEASGDIKWNYPRGGFG 92
>sp|P41732|TSN7_HUMAN Tetraspanin-7 OS=Homo sapiens GN=TSPAN7 PE=1 SV=2
Length = 249
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 20/120 (16%)
Query: 211 PYPVFPGGAII------GCAAGFLNVPKIKGTHTAMKSGMLAAE-----AGFGVLHE--D 257
PY + G I GC A P + + S + AE +GF HE D
Sbjct: 59 PYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD 118
Query: 258 SNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGLAICGLEHYILRGKSPYTLKHGKP 317
+ + Y D +Q E RA ++ L+ CG+++Y SPY L+HG P
Sbjct: 119 TFLRTYTDAMQTYNGNDERSRAVDHVQ-------RSLSCCGVQNYTNWSTSPYFLEHGIP 171
>sp|Q7YQL0|TSN7_PANTR Tetraspanin-7 OS=Pan troglodytes GN=TSPAN7 PE=2 SV=1
Length = 244
Score = 32.3 bits (72), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 20/120 (16%)
Query: 211 PYPVFPGGAII------GCAAGFLNVPKIKGTHTAMKSGMLAAE-----AGFGVLHE--D 257
PY + G I GC A P + + S + AE +GF HE D
Sbjct: 54 PYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD 113
Query: 258 SNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGLAICGLEHYILRGKSPYTLKHGKP 317
+ + Y D +Q E RA ++ L+ CG+++Y SPY L+HG P
Sbjct: 114 TFLRTYTDAMQTYNGNDERSRAVDHVQ-------RSLSCCGVQNYTNWSTSPYFLEHGIP 166
>sp|Q62283|TSN7_MOUSE Tetraspanin-7 OS=Mus musculus GN=Tspan7 PE=2 SV=2
Length = 249
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 211 PYPVFPGGAII------GCAAGFLNVPKIKGTHTAMKSGMLAAE-----AGFGVLHE--D 257
PY + G I GC A P + + S + AE +GF HE D
Sbjct: 59 PYVLIGTGTTIVVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKD 118
Query: 258 SNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGLAICGLEHYILRGKSPYTLKHGKP 317
+ + Y D +Q E RA ++ L+ CG+++Y SPY L HG P
Sbjct: 119 TFLRTYTDAMQNYNGNDERSRAVDHVQ-------RSLSCCGVQNYTNWSSSPYFLDHGIP 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 195,130,216
Number of Sequences: 539616
Number of extensions: 9139913
Number of successful extensions: 19042
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 18944
Number of HSP's gapped (non-prelim): 39
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)