Query 013495
Match_columns 442
No_of_seqs 381 out of 2082
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 11:39:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013495.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013495hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 1.3E-90 4.6E-95 745.4 36.3 436 5-442 136-584 (584)
2 3oz2_A Digeranylgeranylglycero 100.0 6.5E-28 2.2E-32 242.3 25.3 250 7-286 96-350 (397)
3 3cgv_A Geranylgeranyl reductas 99.9 4.5E-24 1.6E-28 215.6 26.6 252 7-287 96-351 (397)
4 3atr_A Conserved archaeal prot 99.9 4.8E-23 1.6E-27 213.8 27.5 257 7-287 94-356 (453)
5 3nix_A Flavoprotein/dehydrogen 99.9 5.8E-23 2E-27 209.7 20.0 283 6-313 99-395 (421)
6 3e1t_A Halogenase; flavoprotei 99.9 4.4E-21 1.5E-25 202.3 24.1 241 6-271 104-355 (512)
7 3i3l_A Alkylhalidase CMLS; fla 99.8 4.1E-19 1.4E-23 190.5 20.4 238 6-271 121-367 (591)
8 3rp8_A Flavoprotein monooxygen 99.8 4E-18 1.4E-22 173.6 24.1 245 5-287 119-371 (407)
9 2weu_A Tryptophan 5-halogenase 99.8 4.4E-17 1.5E-21 171.2 21.4 220 7-271 167-393 (511)
10 2x3n_A Probable FAD-dependent 99.7 2E-17 6.9E-22 167.9 16.4 247 7-287 101-360 (399)
11 1k0i_A P-hydroxybenzoate hydro 99.7 2E-16 6.7E-21 160.1 20.8 248 6-284 96-348 (394)
12 3fmw_A Oxygenase; mithramycin, 99.7 9.9E-16 3.4E-20 163.6 24.9 246 6-287 141-395 (570)
13 2e4g_A Tryptophan halogenase; 99.7 3.9E-16 1.3E-20 166.0 20.8 225 7-271 188-416 (550)
14 3alj_A 2-methyl-3-hydroxypyrid 99.7 8.8E-17 3E-21 162.3 14.8 227 7-270 101-335 (379)
15 2aqj_A Tryptophan halogenase, 99.7 2.5E-16 8.4E-21 166.8 17.9 222 7-271 159-385 (538)
16 2qa2_A CABE, polyketide oxygen 99.7 6.6E-15 2.3E-19 154.8 28.6 228 7-269 101-334 (499)
17 3ihg_A RDME; flavoenzyme, anth 99.7 3.1E-15 1E-19 158.2 25.8 234 7-270 114-358 (535)
18 2qa1_A PGAE, polyketide oxygen 99.7 5.8E-15 2E-19 155.2 27.7 228 7-269 100-333 (500)
19 2pyx_A Tryptophan halogenase; 99.7 4.1E-16 1.4E-20 164.8 19.0 227 7-271 169-401 (526)
20 3c96_A Flavin-containing monoo 99.6 2.5E-14 8.4E-19 146.0 24.4 232 7-270 101-357 (410)
21 2dkh_A 3-hydroxybenzoate hydro 99.6 3.2E-14 1.1E-18 153.9 25.3 251 7-286 135-414 (639)
22 1pn0_A Phenol 2-monooxygenase; 99.6 7.3E-14 2.5E-18 151.8 26.0 261 7-287 113-424 (665)
23 3c4a_A Probable tryptophan hyd 99.5 6.3E-14 2.1E-18 141.7 14.0 229 7-286 92-331 (381)
24 2xdo_A TETX2 protein; tetracyc 99.5 3.1E-13 1E-17 137.3 18.6 223 6-270 121-370 (398)
25 4hb9_A Similarities with proba 99.5 1.2E-12 4.1E-17 131.8 20.5 227 7-270 106-369 (412)
26 2r0c_A REBC; flavin adenine di 99.5 4.1E-12 1.4E-16 134.9 23.3 224 7-270 132-366 (549)
27 2vou_A 2,6-dihydroxypyridine h 99.5 3.3E-12 1.1E-16 129.6 21.1 218 9-270 95-353 (397)
28 3ihm_A Styrene monooxygenase A 98.9 1.7E-08 5.8E-13 103.7 15.9 220 7-268 116-360 (430)
29 1jb0_C Photosystem I iron-sulf 98.9 3.6E-10 1.2E-14 88.2 1.7 69 361-436 1-72 (80)
30 7fd1_A FD1, protein (7-Fe ferr 98.8 1.1E-09 3.7E-14 90.8 3.5 56 366-430 3-58 (106)
31 3eun_A Ferredoxin; electron tr 98.8 1.8E-09 6.1E-14 85.2 3.5 53 366-429 3-61 (82)
32 1ryi_A Glycine oxidase; flavop 98.8 4.7E-08 1.6E-12 97.6 14.7 194 8-252 159-361 (382)
33 1xer_A Ferredoxin; electron tr 98.8 1.3E-09 4.3E-14 89.6 2.1 64 361-431 36-103 (103)
34 2fdn_A Ferredoxin; electron tr 98.8 3.1E-09 1E-13 77.0 3.8 50 368-428 5-54 (55)
35 1dwl_A Ferredoxin I; electron 98.8 7.1E-09 2.4E-13 75.7 5.8 56 362-429 1-59 (59)
36 1bc6_A 7-Fe ferredoxin; electr 98.8 3.2E-09 1.1E-13 82.6 3.5 55 366-429 3-57 (77)
37 2fgo_A Ferredoxin; allochromat 98.7 4.6E-09 1.6E-13 82.7 3.7 54 366-430 3-62 (82)
38 1h98_A Ferredoxin; electron tr 98.7 3E-09 1E-13 82.9 2.5 54 367-429 4-57 (78)
39 2v2k_A Ferredoxin; iron, trans 98.7 6.7E-09 2.3E-13 85.7 3.7 54 367-429 4-57 (105)
40 1rgv_A Ferredoxin; electron tr 98.7 5E-09 1.7E-13 82.0 2.5 53 366-429 3-61 (80)
41 3gyx_B Adenylylsulfate reducta 98.7 6.7E-09 2.3E-13 93.3 3.1 61 366-429 4-64 (166)
42 1jnr_B Adenylylsulfate reducta 98.7 7.7E-09 2.6E-13 91.4 3.2 56 366-429 5-65 (150)
43 2zvs_A Uncharacterized ferredo 98.6 1.4E-08 4.7E-13 80.6 1.5 53 366-429 3-62 (85)
44 2gag_B Heterotetrameric sarcos 98.5 1.5E-06 5E-11 87.3 16.3 196 8-252 169-374 (405)
45 3i9v_9 NADH-quinone oxidoreduc 98.5 3.6E-08 1.2E-12 89.0 3.1 57 367-429 49-116 (182)
46 1y56_B Sarcosine oxidase; dehy 98.5 4E-06 1.4E-10 83.6 17.0 199 8-252 144-354 (382)
47 1dax_A Ferredoxin I; electron 98.5 2.6E-08 8.9E-13 74.2 0.6 55 366-429 6-62 (64)
48 3nyc_A D-arginine dehydrogenas 98.4 7.3E-06 2.5E-10 81.2 17.4 200 6-252 147-357 (381)
49 1rof_A Ferredoxin; electron tr 98.4 3.1E-08 1.1E-12 72.4 -0.2 56 363-429 3-59 (60)
50 1f2g_A Ferredoxin II; electron 98.4 5.9E-08 2E-12 70.7 0.8 52 366-428 4-57 (58)
51 2vpz_B NRFC protein; oxidoredu 98.3 1.6E-07 5.5E-12 86.4 3.0 65 359-431 45-110 (195)
52 1hfe_L Protein (Fe-only hydrog 98.3 1.2E-07 4E-12 97.5 1.6 56 363-428 27-83 (421)
53 1iqz_A Ferredoxin; iron-sulfer 98.3 1.7E-07 5.8E-12 73.4 2.0 55 366-431 6-71 (81)
54 4dgk_A Phytoene dehydrogenase; 98.3 9.8E-06 3.3E-10 83.9 15.8 60 13-88 221-280 (501)
55 2ivf_B Ethylbenzene dehydrogen 98.2 4E-07 1.4E-11 91.0 2.5 59 366-431 146-204 (352)
56 3or1_B Sulfite reductase beta; 98.2 3.1E-07 1E-11 93.2 0.8 57 367-427 214-274 (386)
57 2gf3_A MSOX, monomeric sarcosi 98.2 3.7E-05 1.3E-09 76.5 15.8 62 7-86 144-205 (389)
58 3dme_A Conserved exported prot 98.2 8.8E-05 3E-09 72.8 18.3 77 6-99 143-220 (369)
59 3da1_A Glycerol-3-phosphate de 98.1 0.00016 5.5E-09 76.7 21.1 219 9-255 166-393 (561)
60 1ti6_B Pyrogallol hydroxytrans 98.1 1.2E-06 4E-11 84.9 4.0 57 367-432 64-120 (274)
61 1kqf_B FDH-N beta S, formate d 98.1 8E-07 2.7E-11 86.9 2.8 56 367-430 96-152 (294)
62 1q16_B Respiratory nitrate red 98.1 7.6E-07 2.6E-11 92.8 2.7 59 366-431 179-237 (512)
63 1yvv_A Amine oxidase, flavin-c 98.1 0.0002 6.9E-09 69.6 20.0 36 215-256 294-329 (336)
64 3ps9_A TRNA 5-methylaminomethy 98.1 1.8E-05 6.1E-10 85.8 12.8 65 6-87 410-474 (676)
65 1sj1_A Ferredoxin; thermostabi 98.0 5.6E-07 1.9E-11 66.9 -0.1 54 366-429 6-64 (66)
66 3pvc_A TRNA 5-methylaminomethy 98.0 2.5E-05 8.7E-10 84.8 12.9 64 7-87 406-470 (689)
67 3mm5_B Sulfite reductase, diss 98.0 7.5E-07 2.6E-11 89.8 0.4 54 367-427 203-257 (366)
68 3j16_B RLI1P; ribosome recycli 98.0 1.6E-06 5.4E-11 93.0 2.7 61 361-429 6-73 (608)
69 2qcu_A Aerobic glycerol-3-phos 98.0 0.00025 8.7E-09 73.9 18.6 215 9-254 145-373 (501)
70 2c42_A Pyruvate-ferredoxin oxi 97.9 4.3E-06 1.5E-10 96.0 4.4 60 364-429 681-764 (1231)
71 2ywl_A Thioredoxin reductase r 97.9 0.0002 6.7E-09 63.6 13.4 62 10-90 53-114 (180)
72 3axb_A Putative oxidoreductase 97.8 9.9E-05 3.4E-09 75.3 12.5 74 7-99 175-264 (448)
73 2oln_A NIKD protein; flavoprot 97.8 0.00046 1.6E-08 69.0 16.6 62 7-86 147-208 (397)
74 3c8y_A Iron hydrogenase 1; dit 97.8 1.9E-06 6.6E-11 91.8 -1.4 58 364-429 140-208 (574)
75 3c4n_A Uncharacterized protein 97.8 0.00012 4E-09 74.1 11.5 66 7-90 166-241 (405)
76 1gte_A Dihydropyrimidine dehyd 97.8 1.1E-05 3.6E-10 91.7 4.0 57 365-431 947-1007(1025)
77 3mm5_A Sulfite reductase, diss 97.7 8.2E-06 2.8E-10 83.3 2.0 41 381-426 261-301 (418)
78 1ti6_B Pyrogallol hydroxytrans 97.7 1.2E-05 4E-10 77.8 2.8 54 363-429 91-157 (274)
79 1h0h_B Formate dehydrogenase ( 97.7 8E-06 2.7E-10 76.1 0.8 57 367-430 68-129 (214)
80 3jsk_A Cypbp37 protein; octame 97.6 0.00012 3.9E-09 73.0 8.9 89 6-95 151-260 (344)
81 3dje_A Fructosyl amine: oxygen 97.6 0.00011 3.7E-09 74.7 8.9 64 8-87 156-222 (438)
82 3nlc_A Uncharacterized protein 97.5 0.00028 9.6E-09 74.6 10.4 84 11-114 218-301 (549)
83 3or1_A Sulfite reductase alpha 97.5 2.8E-05 9.5E-10 79.5 2.4 40 381-425 278-317 (437)
84 2i0z_A NAD(FAD)-utilizing dehy 97.5 0.00025 8.6E-09 72.8 9.3 59 12-86 133-191 (447)
85 2ivf_B Ethylbenzene dehydrogen 97.5 4.5E-05 1.5E-09 76.2 3.0 53 364-429 177-238 (352)
86 1qo8_A Flavocytochrome C3 fuma 97.5 0.00023 7.8E-09 75.4 8.5 74 11-96 248-321 (566)
87 2vpz_B NRFC protein; oxidoredu 97.4 2.8E-05 9.7E-10 71.3 1.0 52 364-429 83-143 (195)
88 3i9v_3 NADH-quinone oxidoreduc 97.4 4.1E-05 1.4E-09 84.5 1.9 56 365-429 175-238 (783)
89 2rgh_A Alpha-glycerophosphate 97.3 0.014 4.7E-07 61.9 20.5 67 9-86 184-250 (571)
90 2cul_A Glucose-inhibited divis 97.3 0.00036 1.2E-08 65.0 7.2 62 11-89 66-128 (232)
91 1h0h_B Formate dehydrogenase ( 97.3 3.5E-05 1.2E-09 71.7 -0.1 53 364-429 101-164 (214)
92 1q16_B Respiratory nitrate red 97.3 6E-05 2.1E-09 78.5 1.6 53 364-429 210-271 (512)
93 1rp0_A ARA6, thiazole biosynth 97.3 0.00085 2.9E-08 64.5 9.6 78 6-91 110-196 (284)
94 1d4d_A Flavocytochrome C fumar 97.2 0.00063 2.2E-08 72.2 9.0 73 12-96 254-326 (572)
95 3k7m_X 6-hydroxy-L-nicotine ox 97.2 0.0072 2.5E-07 60.8 16.1 52 15-84 206-257 (431)
96 2gjc_A Thiazole biosynthetic e 97.2 0.0011 3.7E-08 65.5 9.4 89 6-95 137-248 (326)
97 1kqf_B FDH-N beta S, formate d 97.2 7.9E-05 2.7E-09 72.7 1.0 53 364-429 126-187 (294)
98 4at0_A 3-ketosteroid-delta4-5a 97.2 0.0008 2.8E-08 70.2 8.7 70 14-96 203-273 (510)
99 1y0p_A Fumarate reductase flav 97.2 0.00082 2.8E-08 71.2 8.8 67 12-89 254-320 (571)
100 2uzz_A N-methyl-L-tryptophan o 97.1 0.0014 4.7E-08 64.6 9.4 63 6-86 142-204 (372)
101 3bk7_A ABC transporter ATP-bin 97.0 0.00025 8.4E-09 76.0 3.3 61 361-428 19-86 (607)
102 1pj5_A N,N-dimethylglycine oxi 97.0 0.0018 6.1E-08 71.7 9.9 74 6-99 144-217 (830)
103 2vvm_A Monoamine oxidase N; FA 97.0 0.036 1.2E-06 56.9 18.9 56 13-85 255-311 (495)
104 2pa8_D DNA-directed RNA polyme 96.9 0.00027 9.1E-09 67.9 2.0 44 381-429 177-220 (265)
105 3kkj_A Amine oxidase, flavin-c 96.9 0.00061 2.1E-08 61.7 4.3 37 214-256 293-329 (336)
106 3v76_A Flavoprotein; structura 96.9 0.002 6.8E-08 65.7 8.0 59 11-87 130-188 (417)
107 3nks_A Protoporphyrinogen oxid 96.8 0.0029 9.9E-08 64.7 9.1 55 14-85 235-289 (477)
108 2bry_A NEDD9 interacting prote 96.8 0.0012 4.1E-08 68.8 5.9 72 8-90 161-234 (497)
109 3i6d_A Protoporphyrinogen oxid 96.8 0.017 5.7E-07 58.5 14.1 53 17-86 236-289 (470)
110 2wdq_A Succinate dehydrogenase 96.7 0.0041 1.4E-07 66.2 9.0 66 13-88 143-208 (588)
111 2gqf_A Hypothetical protein HI 96.5 0.0054 1.9E-07 62.0 8.6 59 11-86 107-168 (401)
112 3p1w_A Rabgdi protein; GDI RAB 96.5 0.0044 1.5E-07 64.3 7.9 58 13-85 256-313 (475)
113 3ces_A MNMG, tRNA uridine 5-ca 96.5 0.0059 2E-07 65.6 8.9 63 8-87 119-182 (651)
114 1c0p_A D-amino acid oxidase; a 96.5 0.0066 2.3E-07 59.7 8.6 51 7-87 136-186 (363)
115 2zxi_A TRNA uridine 5-carboxym 96.4 0.0068 2.3E-07 64.9 8.4 62 8-86 118-180 (637)
116 2h88_A Succinate dehydrogenase 96.3 0.0069 2.4E-07 64.9 7.9 64 14-88 156-219 (621)
117 3cp8_A TRNA uridine 5-carboxym 96.3 0.0099 3.4E-07 63.8 8.9 62 8-86 112-174 (641)
118 1s3e_A Amine oxidase [flavin-c 96.3 0.15 5E-06 52.8 17.8 58 12-86 211-268 (520)
119 3ka7_A Oxidoreductase; structu 96.2 0.011 3.6E-07 59.4 8.4 58 13-87 196-253 (425)
120 4a9w_A Monooxygenase; baeyer-v 96.2 0.0098 3.3E-07 57.6 7.9 62 9-87 72-133 (357)
121 1dwl_A Ferredoxin I; electron 96.0 0.0044 1.5E-07 44.1 3.3 26 403-429 1-26 (59)
122 3eun_A Ferredoxin; electron tr 96.0 0.0039 1.3E-07 48.3 3.1 25 405-429 2-26 (82)
123 1xer_A Ferredoxin; electron tr 96.0 0.0027 9.4E-08 51.1 2.2 28 403-430 37-64 (103)
124 2bs2_A Quinol-fumarate reducta 95.9 0.013 4.5E-07 63.2 8.1 64 14-88 159-222 (660)
125 1kf6_A Fumarate reductase flav 95.9 0.01 3.4E-07 63.4 7.0 66 13-89 134-200 (602)
126 3fg2_P Putative rubredoxin red 95.9 0.02 6.9E-07 57.4 8.8 69 13-99 184-252 (404)
127 3lov_A Protoporphyrinogen oxid 95.9 0.11 3.6E-06 53.0 14.1 60 8-85 228-288 (475)
128 1dax_A Ferredoxin I; electron 95.8 0.0024 8.3E-08 46.7 1.2 26 403-429 3-28 (64)
129 2ivd_A PPO, PPOX, protoporphyr 95.8 0.028 9.5E-07 57.3 9.6 64 6-86 228-294 (478)
130 3lxd_A FAD-dependent pyridine 95.8 0.028 9.5E-07 56.6 9.5 69 13-99 194-262 (415)
131 2e5v_A L-aspartate oxidase; ar 95.8 0.014 4.7E-07 60.3 7.3 61 13-89 119-179 (472)
132 3fpz_A Thiazole biosynthetic e 95.8 0.0025 8.5E-08 62.2 1.5 43 213-255 281-325 (326)
133 1jb0_C Photosystem I iron-sulf 95.8 0.0041 1.4E-07 47.4 2.3 28 403-430 2-29 (80)
134 3gwf_A Cyclohexanone monooxyge 95.8 0.026 9E-07 59.3 9.3 65 8-87 82-148 (540)
135 1chu_A Protein (L-aspartate ox 95.8 0.0075 2.6E-07 63.5 5.1 65 14-88 139-210 (540)
136 1iqz_A Ferredoxin; iron-sulfer 95.6 0.0043 1.5E-07 47.8 2.0 26 403-429 3-28 (81)
137 3ab1_A Ferredoxin--NADP reduct 95.6 0.035 1.2E-06 54.3 9.1 65 10-90 71-135 (360)
138 1mo9_A ORF3; nucleotide bindin 95.6 0.03 1E-06 58.4 8.9 70 14-99 256-328 (523)
139 2zvs_A Uncharacterized ferredo 95.6 0.0055 1.9E-07 47.7 2.5 25 405-429 2-26 (85)
140 3gyx_A Adenylylsulfate reducta 95.6 0.013 4.3E-07 63.4 6.0 68 11-88 164-235 (662)
141 1sj1_A Ferredoxin; thermostabi 95.6 0.0054 1.9E-07 44.7 2.2 26 403-429 3-28 (66)
142 3g3e_A D-amino-acid oxidase; F 95.5 0.056 1.9E-06 52.7 10.2 52 7-87 136-187 (351)
143 2fgo_A Ferredoxin; allochromat 95.5 0.0054 1.8E-07 47.3 2.1 24 406-429 3-26 (82)
144 1jnr_A Adenylylsulfate reducta 95.4 0.024 8.2E-07 60.9 7.5 66 13-88 151-220 (643)
145 1rgv_A Ferredoxin; electron tr 95.4 0.005 1.7E-07 47.3 1.5 24 406-429 3-26 (80)
146 2fdn_A Ferredoxin; electron tr 95.3 0.0085 2.9E-07 42.3 2.5 25 404-429 2-26 (55)
147 2bcg_G Secretory pathway GDP d 95.2 0.024 8.1E-07 58.0 6.6 65 6-86 232-300 (453)
148 1d5t_A Guanine nucleotide diss 95.1 0.02 7E-07 58.2 5.7 58 13-87 234-291 (433)
149 2wdq_B Succinate dehydrogenase 95.1 0.0018 6.3E-08 60.7 -2.0 54 366-425 144-220 (238)
150 1vg0_A RAB proteins geranylger 95.1 0.062 2.1E-06 57.7 9.4 61 6-81 368-432 (650)
151 1w4x_A Phenylacetone monooxyge 94.9 0.056 1.9E-06 56.6 8.5 64 9-87 90-155 (542)
152 4ap3_A Steroid monooxygenase; 94.9 0.046 1.6E-06 57.5 7.7 63 9-86 95-159 (549)
153 1rof_A Ferredoxin; electron tr 94.8 0.0085 2.9E-07 42.7 1.3 25 403-428 2-26 (60)
154 1fl2_A Alkyl hydroperoxide red 94.8 0.058 2E-06 51.3 7.5 63 10-87 53-116 (310)
155 2zbw_A Thioredoxin reductase; 94.7 0.082 2.8E-06 50.9 8.5 64 10-90 62-125 (335)
156 1vdc_A NTR, NADPH dependent th 94.7 0.06 2E-06 51.8 7.5 61 9-88 66-126 (333)
157 3d1c_A Flavin-containing putat 94.7 0.08 2.7E-06 51.6 8.4 60 10-87 85-144 (369)
158 1q1r_A Putidaredoxin reductase 94.6 0.075 2.6E-06 53.9 8.4 70 13-99 191-261 (431)
159 1f2g_A Ferredoxin II; electron 94.5 0.0061 2.1E-07 43.4 -0.1 23 404-428 2-24 (58)
160 2hqm_A GR, grase, glutathione 94.4 0.062 2.1E-06 55.2 7.3 60 14-88 227-287 (479)
161 2jae_A L-amino acid oxidase; o 94.4 0.12 4.1E-06 52.8 9.4 37 215-255 450-486 (489)
162 2v3a_A Rubredoxin reductase; a 94.4 0.08 2.8E-06 52.6 7.8 68 13-99 187-254 (384)
163 1bc6_A 7-Fe ferredoxin; electr 94.4 0.022 7.4E-07 43.2 2.7 25 405-429 2-28 (77)
164 3nrn_A Uncharacterized protein 94.4 0.056 1.9E-06 54.2 6.6 56 13-87 189-244 (421)
165 2q0l_A TRXR, thioredoxin reduc 94.3 0.071 2.4E-06 50.7 6.9 62 9-88 55-116 (311)
166 3uox_A Otemo; baeyer-villiger 94.2 0.07 2.4E-06 56.1 7.3 64 9-87 83-148 (545)
167 1kf6_B Fumarate reductase iron 94.0 0.0034 1.2E-07 59.1 -3.1 54 366-425 143-218 (243)
168 3iwa_A FAD-dependent pyridine 94.0 0.11 3.9E-06 53.0 8.0 68 13-99 202-269 (472)
169 3lzw_A Ferredoxin--NADP reduct 93.9 0.17 5.9E-06 48.2 8.8 61 10-87 64-124 (332)
170 2xve_A Flavin-containing monoo 93.9 0.11 3.8E-06 53.2 7.7 69 9-87 97-167 (464)
171 3ef6_A Toluene 1,2-dioxygenase 93.8 0.097 3.3E-06 52.6 7.0 67 14-99 186-252 (410)
172 7fd1_A FD1, protein (7-Fe ferr 93.8 0.02 6.7E-07 46.5 1.5 25 405-429 2-28 (106)
173 1h98_A Ferredoxin; electron tr 93.8 0.02 6.9E-07 43.6 1.4 25 405-429 2-28 (78)
174 3i9v_9 NADH-quinone oxidoreduc 93.6 0.02 6.8E-07 50.8 1.4 24 407-430 49-72 (182)
175 3s5w_A L-ornithine 5-monooxyge 93.6 0.05 1.7E-06 55.3 4.6 68 8-86 122-192 (463)
176 2h88_B Succinate dehydrogenase 93.6 0.01 3.5E-07 56.2 -0.6 54 366-425 153-229 (252)
177 2c42_A Pyruvate-ferredoxin oxi 93.5 0.019 6.6E-07 66.0 1.3 45 385-429 662-706 (1231)
178 2z3y_A Lysine-specific histone 93.3 0.89 3.1E-05 48.7 14.0 37 216-255 623-659 (662)
179 2gv8_A Monooxygenase; FMO, FAD 93.3 0.13 4.5E-06 52.1 7.0 68 9-87 111-178 (447)
180 1ges_A Glutathione reductase; 93.1 0.15 5.1E-06 52.0 7.2 59 14-88 209-267 (450)
181 2q7v_A Thioredoxin reductase; 93.1 0.14 4.6E-06 49.2 6.6 61 10-87 62-124 (325)
182 1m6i_A Programmed cell death p 93.0 0.19 6.5E-06 51.9 7.9 58 13-87 226-283 (493)
183 1n4w_A CHOD, cholesterol oxida 93.0 0.12 4E-06 53.7 6.3 61 19-87 227-289 (504)
184 1hyu_A AHPF, alkyl hydroperoxi 93.0 0.14 4.8E-06 53.3 6.8 63 10-87 264-327 (521)
185 3f8d_A Thioredoxin reductase ( 92.8 0.26 8.9E-06 46.6 8.0 60 10-87 67-126 (323)
186 2v2k_A Ferredoxin; iron, trans 92.8 0.033 1.1E-06 44.9 1.5 25 405-429 2-28 (105)
187 3oc4_A Oxidoreductase, pyridin 92.8 0.27 9.2E-06 49.9 8.6 57 14-88 190-246 (452)
188 3o0h_A Glutathione reductase; 92.6 0.22 7.5E-06 51.1 7.6 58 14-88 233-290 (484)
189 2wpf_A Trypanothione reductase 92.5 0.25 8.5E-06 51.0 7.9 59 14-88 236-294 (495)
190 1xdi_A RV3303C-LPDA; reductase 92.5 0.26 8.9E-06 50.8 8.1 58 14-88 224-281 (499)
191 1coy_A Cholesterol oxidase; ox 92.4 0.16 5.4E-06 52.7 6.3 63 17-87 230-294 (507)
192 2cdu_A NADPH oxidase; flavoenz 92.4 0.24 8.1E-06 50.3 7.5 58 14-88 192-249 (452)
193 1trb_A Thioredoxin reductase; 92.3 0.31 1.1E-05 46.3 7.8 62 14-86 185-247 (320)
194 2yqu_A 2-oxoglutarate dehydrog 92.3 0.22 7.5E-06 50.6 7.1 59 13-88 208-266 (455)
195 1fec_A Trypanothione reductase 92.2 0.25 8.6E-06 50.9 7.5 59 14-88 232-290 (490)
196 1v59_A Dihydrolipoamide dehydr 92.0 0.21 7.2E-06 51.0 6.6 65 14-88 225-289 (478)
197 4dna_A Probable glutathione re 91.9 0.31 1.1E-05 49.7 7.7 57 14-87 212-269 (463)
198 3cf4_A Acetyl-COA decarboxylas 91.9 0.0066 2.3E-07 66.9 -5.2 54 367-427 413-471 (807)
199 1hfe_L Protein (Fe-only hydrog 91.9 0.047 1.6E-06 55.6 1.5 27 403-429 27-53 (421)
200 2r9z_A Glutathione amide reduc 91.8 0.31 1.1E-05 49.8 7.5 58 14-88 208-266 (463)
201 2a87_A TRXR, TR, thioredoxin r 91.5 0.25 8.7E-06 47.6 6.2 61 9-88 67-128 (335)
202 1trb_A Thioredoxin reductase; 91.3 0.33 1.1E-05 46.1 6.7 60 10-88 59-118 (320)
203 3itj_A Thioredoxin reductase 1 91.2 0.32 1.1E-05 46.3 6.6 65 9-88 80-144 (338)
204 2bs2_B Quinol-fumarate reducta 91.1 0.022 7.7E-07 53.3 -1.7 53 367-425 147-222 (241)
205 1zk7_A HGII, reductase, mercur 91.1 0.41 1.4E-05 48.7 7.6 57 14-88 217-273 (467)
206 3cty_A Thioredoxin reductase; 91.0 0.34 1.2E-05 46.2 6.5 59 10-87 69-127 (319)
207 3cgb_A Pyridine nucleotide-dis 90.6 0.54 1.8E-05 48.2 8.0 56 14-87 228-283 (480)
208 2gqw_A Ferredoxin reductase; f 90.4 0.52 1.8E-05 47.2 7.5 63 14-99 188-250 (408)
209 4b63_A L-ornithine N5 monooxyg 90.3 0.4 1.4E-05 49.6 6.7 69 6-84 138-212 (501)
210 1onf_A GR, grase, glutathione 90.1 0.8 2.8E-05 47.1 8.8 59 14-88 218-277 (500)
211 3fbs_A Oxidoreductase; structu 89.9 0.46 1.6E-05 44.3 6.3 62 9-88 52-114 (297)
212 2xag_A Lysine-specific histone 89.8 2.6 9E-05 46.6 13.1 38 216-256 794-831 (852)
213 1nhp_A NADH peroxidase; oxidor 89.2 0.4 1.4E-05 48.5 5.6 58 13-88 191-248 (447)
214 3vr8_B Iron-sulfur subunit of 89.1 0.075 2.6E-06 51.2 0.1 17 408-424 236-252 (282)
215 3qvp_A Glucose oxidase; oxidor 89.0 0.48 1.6E-05 50.2 6.1 73 14-99 228-304 (583)
216 1zmd_A Dihydrolipoyl dehydroge 88.9 0.82 2.8E-05 46.5 7.7 65 13-88 220-284 (474)
217 3itj_A Thioredoxin reductase 1 88.8 0.8 2.7E-05 43.5 7.2 58 17-85 212-270 (338)
218 2jbv_A Choline oxidase; alcoho 88.6 0.36 1.2E-05 50.6 4.8 68 19-98 214-283 (546)
219 3qj4_A Renalase; FAD/NAD(P)-bi 88.6 0.63 2.2E-05 44.9 6.3 55 13-84 109-163 (342)
220 3ntd_A FAD-dependent pyridine 88.3 1.2 4.1E-05 46.3 8.6 69 13-99 192-278 (565)
221 1gpe_A Protein (glucose oxidas 88.3 0.23 7.9E-06 52.6 3.1 71 16-99 234-308 (587)
222 2qae_A Lipoamide, dihydrolipoy 88.2 1.1 3.9E-05 45.4 8.2 62 14-88 216-278 (468)
223 3cty_A Thioredoxin reductase; 88.1 0.77 2.6E-05 43.7 6.5 60 16-86 193-252 (319)
224 1ju2_A HydroxynitrIle lyase; f 88.1 0.24 8.3E-06 51.8 3.2 67 19-98 200-271 (536)
225 3ab1_A Ferredoxin--NADP reduct 87.8 0.8 2.7E-05 44.4 6.6 62 14-87 203-264 (360)
226 3dk9_A Grase, GR, glutathione 87.3 1.4 4.9E-05 44.8 8.3 66 14-87 229-294 (478)
227 1fl2_A Alkyl hydroperoxide red 87.1 0.83 2.9E-05 43.1 6.1 60 15-85 181-241 (310)
228 2bc0_A NADH oxidase; flavoprot 87.0 0.7 2.4E-05 47.4 5.9 56 14-87 237-292 (490)
229 1y56_A Hypothetical protein PH 86.7 0.67 2.3E-05 47.7 5.5 50 21-87 265-314 (493)
230 2eq6_A Pyruvate dehydrogenase 86.7 1.2 3.9E-05 45.4 7.2 64 13-88 210-273 (464)
231 3ics_A Coenzyme A-disulfide re 86.6 1.2 4.2E-05 46.7 7.5 66 13-99 228-293 (588)
232 3dgh_A TRXR-1, thioredoxin red 86.6 1.1 3.6E-05 45.9 6.9 63 14-87 228-290 (483)
233 3lad_A Dihydrolipoamide dehydr 85.8 1.7 5.7E-05 44.2 7.9 61 14-88 222-282 (476)
234 1ebd_A E3BD, dihydrolipoamide 85.8 1.3 4.5E-05 44.7 7.1 61 14-88 212-272 (455)
235 3r9u_A Thioredoxin reductase; 85.5 1 3.5E-05 42.3 5.8 51 23-85 193-243 (315)
236 1kdg_A CDH, cellobiose dehydro 85.5 1.1 3.6E-05 46.7 6.3 70 17-99 199-272 (546)
237 1b37_A Protein (polyamine oxid 85.3 0.87 3E-05 46.2 5.4 38 216-256 423-460 (472)
238 1xhc_A NADH oxidase /nitrite r 84.9 1.2 4.1E-05 43.9 6.1 62 14-99 184-245 (367)
239 3urh_A Dihydrolipoyl dehydroge 84.8 2.2 7.6E-05 43.5 8.3 63 14-88 240-302 (491)
240 1dxl_A Dihydrolipoamide dehydr 84.7 1.5 5E-05 44.5 6.9 63 14-88 219-281 (470)
241 2zbw_A Thioredoxin reductase; 83.6 2.8 9.6E-05 39.8 8.0 63 13-87 191-253 (335)
242 2a8x_A Dihydrolipoyl dehydroge 83.0 2.5 8.7E-05 42.7 7.8 61 14-88 213-273 (464)
243 3f8d_A Thioredoxin reductase ( 82.7 2.4 8.2E-05 39.7 7.0 58 18-87 194-252 (323)
244 3r9u_A Thioredoxin reductase; 82.2 2 7E-05 40.2 6.3 60 10-86 59-118 (315)
245 3c8y_A Iron hydrogenase 1; dit 82.0 0.26 8.9E-06 52.1 -0.2 27 403-429 139-169 (574)
246 3fim_B ARYL-alcohol oxidase; A 81.6 0.75 2.6E-05 48.5 3.2 72 14-98 209-286 (566)
247 3h8l_A NADH oxidase; membrane 81.5 1.5 5E-05 43.6 5.2 54 13-87 218-271 (409)
248 3fbs_A Oxidoreductase; structu 81.2 1.3 4.3E-05 41.2 4.4 52 14-86 175-226 (297)
249 3s5w_A L-ornithine 5-monooxyge 80.7 3.1 0.00011 41.8 7.4 50 26-87 329-378 (463)
250 2yg5_A Putrescine oxidase; oxi 80.2 2 7E-05 42.9 5.8 51 18-85 217-267 (453)
251 1cjc_A Protein (adrenodoxin re 79.7 1.8 6.3E-05 44.1 5.3 64 15-85 245-332 (460)
252 3klj_A NAD(FAD)-dependent dehy 78.8 2.1 7.2E-05 42.5 5.3 38 213-251 255-292 (385)
253 2a8x_A Dihydrolipoyl dehydroge 78.7 3.2 0.00011 41.9 6.8 56 15-88 93-148 (464)
254 1ojt_A Surface protein; redox- 78.3 2.2 7.6E-05 43.4 5.4 62 14-88 227-288 (482)
255 4g6h_A Rotenone-insensitive NA 78.0 3.7 0.00013 42.3 7.1 70 15-97 274-344 (502)
256 3k30_A Histamine dehydrogenase 78.0 1.2 4.2E-05 47.8 3.5 54 16-85 570-623 (690)
257 4gcm_A TRXR, thioredoxin reduc 77.9 2.2 7.4E-05 40.4 4.9 39 213-255 268-306 (312)
258 1gte_A Dihydropyrimidine dehyd 77.8 2.7 9.2E-05 47.4 6.3 70 16-87 374-443 (1025)
259 4fk1_A Putative thioredoxin re 77.8 4.2 0.00014 38.3 6.9 61 10-86 57-117 (304)
260 2q0l_A TRXR, thioredoxin reduc 77.3 3.5 0.00012 38.7 6.2 60 16-86 181-241 (311)
261 3lzw_A Ferredoxin--NADP reduct 77.3 2.9 9.8E-05 39.4 5.6 55 20-86 196-250 (332)
262 3pl8_A Pyranose 2-oxidase; sub 77.2 2.3 7.9E-05 45.2 5.3 62 26-99 273-335 (623)
263 3q9t_A Choline dehydrogenase a 76.6 1.8 6.3E-05 45.6 4.3 52 25-87 218-271 (577)
264 1lvl_A Dihydrolipoamide dehydr 76.0 2.4 8.3E-05 42.9 4.9 59 13-88 212-270 (458)
265 1rsg_A FMS1 protein; FAD bindi 75.9 4.5 0.00016 41.4 7.0 55 15-85 201-256 (516)
266 2b9w_A Putative aminooxidase; 75.6 4.9 0.00017 39.7 7.0 53 15-85 205-257 (424)
267 3or1_B Sulfite reductase beta; 75.5 0.62 2.1E-05 46.7 0.3 27 403-429 210-239 (386)
268 2q7v_A Thioredoxin reductase; 75.5 4.3 0.00015 38.4 6.3 59 16-86 190-249 (325)
269 3i9v_3 NADH-quinone oxidoreduc 75.3 0.86 2.9E-05 50.0 1.4 27 403-429 173-203 (783)
270 4a5l_A Thioredoxin reductase; 75.0 3 0.0001 39.1 5.0 59 10-86 63-121 (314)
271 1q1r_A Putidaredoxin reductase 75.0 2.5 8.6E-05 42.5 4.7 40 213-252 274-318 (431)
272 3mm5_B Sulfite reductase, diss 74.9 0.44 1.5E-05 47.4 -1.0 28 403-430 199-229 (366)
273 2vdc_G Glutamate synthase [NAD 74.3 1.3 4.4E-05 45.3 2.3 66 20-87 309-379 (456)
274 1dxl_A Dihydrolipoamide dehydr 74.1 3.6 0.00012 41.5 5.6 34 214-252 308-341 (470)
275 3kd9_A Coenzyme A disulfide re 73.4 4.9 0.00017 40.4 6.4 65 14-99 191-255 (449)
276 3dgz_A Thioredoxin reductase 2 73.3 7.4 0.00025 39.6 7.8 64 14-88 226-289 (488)
277 1vdc_A NTR, NADPH dependent th 73.0 5.6 0.00019 37.6 6.4 59 17-85 198-258 (333)
278 4gut_A Lysine-specific histone 72.4 5.4 0.00018 43.6 6.8 57 9-84 527-583 (776)
279 3ic9_A Dihydrolipoamide dehydr 72.1 10 0.00035 38.7 8.5 61 14-88 216-276 (492)
280 3gyx_B Adenylylsulfate reducta 72.1 1.2 4.1E-05 39.1 1.3 27 365-397 40-66 (166)
281 1v59_A Dihydrolipoamide dehydr 72.0 3.9 0.00013 41.4 5.3 35 213-252 315-349 (478)
282 1jnr_B Adenylylsulfate reducta 71.8 1.3 4.3E-05 38.3 1.3 26 365-396 41-66 (150)
283 4b1b_A TRXR, thioredoxin reduc 71.8 7.2 0.00025 40.7 7.4 58 15-89 265-322 (542)
284 3vrd_B FCCB subunit, flavocyto 69.6 5.5 0.00019 39.0 5.7 68 12-99 197-268 (401)
285 2h88_B Succinate dehydrogenase 69.5 1.1 3.9E-05 41.9 0.5 19 407-425 154-172 (252)
286 1hyu_A AHPF, alkyl hydroperoxi 68.2 6.5 0.00022 40.5 6.1 59 16-85 393-452 (521)
287 2wdq_B Succinate dehydrogenase 68.2 1.3 4.3E-05 41.0 0.5 21 406-426 144-164 (238)
288 2bs2_B Quinol-fumarate reducta 68.1 0.35 1.2E-05 45.0 -3.3 20 407-426 147-166 (241)
289 4a5l_A Thioredoxin reductase; 68.0 15 0.0005 34.2 8.1 40 212-255 273-312 (314)
290 3d1c_A Flavin-containing putat 67.7 7.7 0.00026 37.2 6.2 50 215-265 300-352 (369)
291 1ojt_A Surface protein; redox- 67.4 5.1 0.00018 40.7 5.0 35 213-252 314-348 (482)
292 1ebd_A E3BD, dihydrolipoamide 65.7 7.5 0.00026 39.0 5.8 54 15-88 93-147 (455)
293 3hyw_A Sulfide-quinone reducta 64.6 5.4 0.00018 39.9 4.5 56 15-87 202-257 (430)
294 4gde_A UDP-galactopyranose mut 64.6 4.7 0.00016 40.8 4.0 58 13-90 222-279 (513)
295 3qfa_A Thioredoxin reductase 1 64.4 12 0.00041 38.4 7.2 64 14-87 251-316 (519)
296 1kf6_B Fumarate reductase iron 63.9 1.2 4E-05 41.4 -0.7 21 406-426 143-163 (243)
297 3sx6_A Sulfide-quinone reducta 63.8 3.9 0.00013 40.9 3.3 43 214-256 296-345 (437)
298 3mm5_A Sulfite reductase, diss 62.9 1.4 4.8E-05 44.6 -0.3 27 403-429 242-275 (418)
299 3h28_A Sulfide-quinone reducta 62.2 7.1 0.00024 38.9 4.8 56 15-87 202-257 (430)
300 2cul_A Glucose-inhibited divis 61.8 6.2 0.00021 35.8 4.0 36 213-254 196-231 (232)
301 2bry_A NEDD9 interacting prote 60.8 4.6 0.00016 41.5 3.2 45 212-256 389-434 (497)
302 3nlc_A Uncharacterized protein 60.2 4 0.00014 42.8 2.6 36 214-254 507-542 (549)
303 3vr8_B Iron-sulfur subunit of 60.2 2.4 8.2E-05 40.6 0.8 18 408-425 179-196 (282)
304 2bc0_A NADH oxidase; flavoprot 58.8 10 0.00034 38.6 5.3 39 214-252 317-360 (490)
305 4eqs_A Coenzyme A disulfide re 58.8 8.4 0.00029 38.7 4.7 52 15-87 190-241 (437)
306 1sez_A Protoporphyrinogen oxid 58.6 8.6 0.00029 38.9 4.8 36 215-256 460-495 (504)
307 1lqt_A FPRA; NADP+ derivative, 58.4 6.9 0.00024 39.7 4.0 67 16-85 249-325 (456)
308 1zmd_A Dihydrolipoyl dehydroge 58.1 17 0.00058 36.6 6.9 35 213-252 310-344 (474)
309 2a87_A TRXR, TR, thioredoxin r 58.0 8.2 0.00028 36.7 4.3 40 213-256 278-317 (335)
310 4fk1_A Putative thioredoxin re 57.3 5.9 0.0002 37.2 3.0 39 213-255 262-300 (304)
311 1sez_A Protoporphyrinogen oxid 57.1 9.1 0.00031 38.7 4.6 64 12-85 239-307 (504)
312 3t37_A Probable dehydrogenase; 57.1 8 0.00027 39.5 4.2 71 13-98 210-281 (526)
313 2gag_A Heterotetrameric sarcos 56.0 10 0.00035 42.4 5.1 60 20-88 323-385 (965)
314 2x8g_A Thioredoxin glutathione 55.7 25 0.00085 36.6 7.9 62 14-87 327-396 (598)
315 3l8k_A Dihydrolipoyl dehydroge 55.4 13 0.00043 37.6 5.4 70 16-99 213-284 (466)
316 1xhc_A NADH oxidase /nitrite r 55.1 8 0.00027 37.8 3.7 38 213-251 258-295 (367)
317 3oc4_A Oxidoreductase, pyridin 54.4 18 0.00061 36.2 6.2 53 19-87 64-116 (452)
318 2e1m_C L-glutamate oxidase; L- 53.8 7.6 0.00026 34.2 3.0 37 216-256 118-154 (181)
319 3ef6_A Toluene 1,2-dioxygenase 53.5 9.2 0.00032 37.9 3.9 39 213-252 265-308 (410)
320 2gqw_A Ferredoxin reductase; f 53.3 8.5 0.00029 38.1 3.6 40 213-252 263-307 (408)
321 3kd9_A Coenzyme A disulfide re 53.1 11 0.00036 37.8 4.3 40 213-252 270-314 (449)
322 4eqs_A Coenzyme A disulfide re 53.0 9.2 0.00031 38.4 3.8 40 213-252 266-310 (437)
323 3ntd_A FAD-dependent pyridine 52.7 9.4 0.00032 39.4 3.9 40 213-252 293-337 (565)
324 3lxd_A FAD-dependent pyridine 52.6 13 0.00045 36.6 4.9 40 213-252 275-320 (415)
325 3h28_A Sulfide-quinone reducta 52.4 14 0.00049 36.6 5.1 43 214-256 285-334 (430)
326 3sx6_A Sulfide-quinone reducta 52.4 13 0.00045 37.0 4.9 55 13-87 59-113 (437)
327 3fg2_P Putative rubredoxin red 51.7 7 0.00024 38.6 2.6 40 213-252 265-309 (404)
328 3klj_A NAD(FAD)-dependent dehy 50.9 10 0.00034 37.5 3.6 48 19-85 68-115 (385)
329 3qj4_A Renalase; FAD/NAD(P)-bi 50.6 8.8 0.0003 36.6 3.1 35 214-254 308-342 (342)
330 3vrd_B FCCB subunit, flavocyto 50.6 16 0.00053 35.7 5.0 42 213-256 284-325 (401)
331 2qae_A Lipoamide, dihydrolipoy 50.3 17 0.00058 36.5 5.3 35 214-252 305-339 (468)
332 2cdu_A NADPH oxidase; flavoenz 49.8 8.7 0.0003 38.5 3.1 38 214-251 273-315 (452)
333 2yqu_A 2-oxoglutarate dehydrog 49.5 19 0.00065 36.0 5.6 34 214-252 293-326 (455)
334 3or1_A Sulfite reductase alpha 49.2 3.5 0.00012 41.9 -0.1 27 403-429 243-292 (437)
335 2v3a_A Rubredoxin reductase; a 48.3 13 0.00044 36.3 4.0 49 19-87 66-114 (384)
336 1igr_A Insulin-like growth fac 48.2 5.8 0.0002 40.8 1.4 27 369-395 216-242 (478)
337 3h8l_A NADH oxidase; membrane 48.0 16 0.00055 35.8 4.6 40 214-256 298-337 (409)
338 2yg5_A Putrescine oxidase; oxi 47.7 14 0.00049 36.5 4.3 37 215-254 415-451 (453)
339 3cgb_A Pyridine nucleotide-dis 47.3 13 0.00045 37.6 3.9 39 214-252 309-352 (480)
340 4a9w_A Monooxygenase; baeyer-v 46.8 13 0.00043 35.1 3.5 40 213-256 312-353 (357)
341 3ics_A Coenzyme A-disulfide re 46.6 14 0.00047 38.4 4.1 40 213-252 308-352 (588)
342 1xdi_A RV3303C-LPDA; reductase 46.5 28 0.00097 35.3 6.3 35 213-252 307-341 (499)
343 1m6i_A Programmed cell death p 45.9 8.8 0.0003 39.2 2.4 38 215-252 310-351 (493)
344 3hyw_A Sulfide-quinone reducta 45.5 18 0.00062 36.0 4.6 44 213-256 284-334 (430)
345 1y56_A Hypothetical protein PH 45.4 17 0.00058 37.0 4.4 36 214-255 342-377 (493)
346 3l8k_A Dihydrolipoyl dehydroge 44.6 24 0.00083 35.4 5.4 35 213-252 298-332 (466)
347 1n8y_C Protooncoprotein; tyros 44.4 10 0.00035 40.2 2.6 55 368-425 228-298 (608)
348 2hqm_A GR, grase, glutathione 44.2 26 0.00089 35.3 5.6 35 213-252 312-346 (479)
349 3uox_A Otemo; baeyer-villiger 43.5 20 0.0007 37.1 4.8 40 25-86 350-391 (545)
350 1b37_A Protein (polyamine oxid 43.0 17 0.00058 36.5 4.0 55 14-85 207-269 (472)
351 2vdc_G Glutamate synthase [NAD 42.2 19 0.00063 36.5 4.1 38 213-255 407-444 (456)
352 2iid_A L-amino-acid oxidase; f 41.9 46 0.0016 33.3 7.1 38 215-256 449-486 (498)
353 2pa8_D DNA-directed RNA polyme 40.4 18 0.00063 33.8 3.5 38 384-429 154-191 (265)
354 2i0z_A NAD(FAD)-utilizing dehy 40.3 21 0.0007 35.8 4.1 41 214-254 403-443 (447)
355 2gmh_A Electron transfer flavo 40.0 10 0.00035 39.8 1.7 29 362-397 545-573 (584)
356 2eq6_A Pyruvate dehydrogenase 39.8 55 0.0019 32.7 7.2 34 214-252 300-333 (464)
357 3iwa_A FAD-dependent pyridine 39.2 28 0.00096 34.9 4.9 40 213-252 284-328 (472)
358 3cf4_A Acetyl-COA decarboxylas 39.1 4.8 0.00017 44.2 -0.9 20 406-425 412-431 (807)
359 1nhp_A NADH peroxidase; oxidor 38.7 15 0.0005 36.7 2.7 38 214-251 272-314 (447)
360 3j16_B RLI1P; ribosome recycli 38.6 12 0.00042 39.5 2.1 28 363-396 47-74 (608)
361 1ps9_A 2,4-dienoyl-COA reducta 38.3 35 0.0012 36.1 5.7 52 17-86 577-628 (671)
362 2hr7_A Insulin receptor; hormo 38.0 8.4 0.00029 39.7 0.7 25 370-394 224-248 (486)
363 3nrn_A Uncharacterized protein 37.7 18 0.00061 35.5 3.1 30 216-250 372-403 (421)
364 2dtg_E Insulin receptor; IR ec 36.5 3.7 0.00013 45.5 -2.4 24 371-394 225-248 (897)
365 4gcm_A TRXR, thioredoxin reduc 35.8 60 0.002 30.1 6.4 57 10-85 59-115 (312)
366 1rsg_A FMS1 protein; FAD bindi 35.1 24 0.00083 35.8 3.7 39 215-256 471-509 (516)
367 2iid_A L-amino-acid oxidase; f 34.8 30 0.001 34.7 4.3 50 23-85 248-297 (498)
368 3gwf_A Cyclohexanone monooxyge 32.9 33 0.0011 35.4 4.3 42 25-87 342-385 (540)
369 1qo8_A Flavocytochrome C3 fuma 30.9 32 0.0011 35.6 3.8 41 214-254 520-563 (566)
370 1yy9_A Epidermal growth factor 30.1 27 0.00093 37.0 3.1 23 369-391 222-244 (624)
371 1o94_A Tmadh, trimethylamine d 30.0 51 0.0017 35.4 5.3 24 17-40 575-598 (729)
372 4g6h_A Rotenone-insensitive NA 29.9 34 0.0012 34.9 3.8 38 214-254 363-400 (502)
373 3urh_A Dihydrolipoyl dehydroge 29.9 90 0.0031 31.3 7.0 35 213-252 328-362 (491)
374 1chu_A Protein (L-aspartate ox 29.7 34 0.0012 35.3 3.7 43 212-254 364-410 (540)
375 3o0h_A Glutathione reductase; 29.6 41 0.0014 33.9 4.2 35 213-252 316-350 (484)
376 4dna_A Probable glutathione re 29.0 43 0.0015 33.5 4.3 35 213-252 296-330 (463)
377 1lvl_A Dihydrolipoamide dehydr 28.3 1.1E+02 0.0039 30.3 7.3 34 214-252 296-329 (458)
378 2gag_A Heterotetrameric sarcos 28.1 40 0.0014 37.6 4.1 36 214-255 409-444 (965)
379 3ic9_A Dihydrolipoamide dehydr 27.8 47 0.0016 33.6 4.3 35 213-252 303-337 (492)
380 4b63_A L-ornithine N5 monooxyg 27.6 63 0.0022 32.8 5.3 62 28-92 354-415 (501)
381 1y0p_A Fumarate reductase flav 27.6 31 0.0011 35.6 3.0 40 214-253 525-567 (571)
382 3dk9_A Grase, GR, glutathione 26.0 52 0.0018 32.9 4.3 35 213-252 321-355 (478)
383 3i2t_A Epidermal growth factor 25.9 23 0.0008 36.9 1.6 26 368-393 223-248 (551)
384 1fec_A Trypanothione reductase 25.7 53 0.0018 33.2 4.2 35 213-252 316-350 (490)
385 1zk7_A HGII, reductase, mercur 25.7 55 0.0019 32.7 4.4 35 213-252 299-333 (467)
386 3qfa_A Thioredoxin reductase 1 25.4 1.3E+02 0.0043 30.6 7.1 35 213-252 344-379 (519)
387 3lad_A Dihydrolipoamide dehydr 25.1 59 0.002 32.5 4.5 35 213-252 308-342 (476)
388 3k30_A Histamine dehydrogenase 24.9 32 0.0011 36.6 2.6 36 215-256 641-676 (690)
389 1ges_A Glutathione reductase; 24.8 56 0.0019 32.5 4.2 35 213-252 293-327 (450)
390 3dgz_A Thioredoxin reductase 2 24.8 2E+02 0.0069 28.6 8.5 36 213-252 316-351 (488)
391 2bs2_A Quinol-fumarate reducta 24.1 45 0.0015 35.5 3.5 44 212-255 382-429 (660)
392 2wpf_A Trypanothione reductase 24.0 59 0.002 32.9 4.2 35 213-252 320-354 (495)
393 1d4d_A Flavocytochrome C fumar 23.2 43 0.0015 34.8 3.0 41 214-254 526-569 (572)
394 1kf6_A Fumarate reductase flav 22.8 55 0.0019 34.3 3.8 43 212-254 369-415 (602)
395 3dgh_A TRXR-1, thioredoxin red 22.6 74 0.0025 31.9 4.6 36 213-252 316-351 (483)
396 4gut_A Lysine-specific histone 22.5 66 0.0023 34.9 4.5 36 214-252 740-775 (776)
397 2r9z_A Glutathione amide reduc 22.4 67 0.0023 32.1 4.2 34 214-252 293-326 (463)
398 2e5v_A L-aspartate oxidase; ar 22.2 22 0.00075 36.0 0.5 41 212-252 326-370 (472)
399 1mo9_A ORF3; nucleotide bindin 21.8 63 0.0021 32.9 3.9 35 213-252 343-377 (523)
400 4ap3_A Steroid monooxygenase; 21.2 83 0.0028 32.5 4.7 39 27-87 357-397 (549)
401 4dsg_A UDP-galactopyranose mut 20.9 1E+02 0.0036 31.0 5.4 33 217-251 420-452 (484)
402 2ahx_A P180ERBB4, receptor tyr 20.8 36 0.0012 36.0 1.9 24 368-391 219-242 (617)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=1.3e-90 Score=745.43 Aligned_cols=436 Identities=57% Similarity=1.060 Sum_probs=401.8
Q ss_pred cCCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 5 HNGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 5 ~~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
+++|+++|..|++||.++|++.||+|+++++|++++.+++|.|++|++.++|++++|+++++|+++.+++||+||+|||+
T Consensus 136 ~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~ 215 (584)
T 2gmh_A 136 HGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGC 215 (584)
T ss_dssp TTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCT
T ss_pred CCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCC
Confidence 46899999999999999999999999999999999998778899999999999999999999999999999999999999
Q ss_pred CCcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcC--CCeEEEEEEEe
Q 013495 85 RGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMN--DRQIALGLVVA 162 (442)
Q Consensus 85 ~s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~--~~~vsVGlv~~ 162 (442)
+|.++++|+++++++ ....++.+++|++++|+++...+.++.+.|++|||+....+|++|+|+.+ ++.++||+++.
T Consensus 216 ~S~vr~~l~~~~gl~--~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~ 293 (584)
T 2gmh_A 216 HGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVG 293 (584)
T ss_dssp TCHHHHHHHHHTTTT--TTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEE
T ss_pred CchHHHHHHHHhCCC--CCCCchhHHhhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEe
Confidence 999999999999987 35567888999999998887767788889999999875577889999998 78999999998
Q ss_pred cCCCCCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHH
Q 013495 163 LNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKS 242 (442)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~S 242 (442)
.++.++.+++.++|++|++||.+++++++++++.++++.++.++++.+++++.+|++||||||++++|+.|+|+++||.+
T Consensus 294 ~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~d 373 (584)
T 2gmh_A 294 LDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKS 373 (584)
T ss_dssp TTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHH
T ss_pred cCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHH
Confidence 88777777888999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc-----Cch---HHHHHHHHHHhhhHHHHHHHHchhhhhh-h-CChHHHHHHHHHHHHhcCCCCCcc
Q 013495 243 GMLAAEAGFGVLHE-----DSN---MEIYWDTLQKSWVWQELQRARNYRPAFE-Y-GLLPGLAICGLEHYILRGKSPYTL 312 (442)
Q Consensus 243 G~lAAeai~~al~~-----~~~---l~~Y~~~~~~~~~~~el~~~r~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 312 (442)
|+++|++|.+++.. ..+ |+.|++.++.+|+++||+.+|+++++|+ + |.|++|++.++++|+++|+.||||
T Consensus 374 a~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 453 (584)
T 2gmh_A 374 GTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTL 453 (584)
T ss_dssp HHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGSTTTHHHHHHHHHHHTTTTTTCCSCCC
T ss_pred HHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHHhhccHHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999998853 232 8999999999999999999999999886 3 999999999999999999999999
Q ss_pred cCCCCccccchhhhcCCCCCCCCCCCCcCcCcccceeecCccccCCCCCCeEecCCCCCcccCCCCCccccccccccceE
Q 013495 313 KHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVY 392 (442)
Q Consensus 313 ~~~~~d~~~~~~~~~~~~i~y~~pdg~l~fd~~~~~~~~~~~~~~d~~~Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y 392 (442)
+|.++||.+++|+++++||+||||||+||||+||||++|||||+||||+||+|+|+++|...|++.|+++|+++|||+||
T Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~~~d~~~~~~~~~~~~~~~c~~~CPa~~~ 533 (584)
T 2gmh_A 454 KHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVY 533 (584)
T ss_dssp CCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSEEESSTTHHHHTHHHHHCCTHHHHCTTCCE
T ss_pred CCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeEEEcCcccchhhchhhhcchhhhcCChhhE
Confidence 99999999999999999999999999999999999999999999999999999999999777777888999999999999
Q ss_pred EEecCCCCc-eeEEEecCCCccCCcccccCCCCCeeEECcCCCCCCcccCC
Q 013495 393 EYVPDEKNQ-LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 442 (442)
Q Consensus 393 ~~~~~~~~~-~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~p~gg~G~~y~~~ 442 (442)
++++++++. .+++||+++|+|||||+++||+++|+|++|+||+||+|++|
T Consensus 534 ~~~~~~~~~~~~~~i~~~~Ci~C~~C~~~cp~~~i~~~~p~gg~g~~~~~~ 584 (584)
T 2gmh_A 534 EFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 (584)
T ss_dssp EEEECSSTTCEEEEECGGGCCCCCHHHHHCTTCCEEECCCSTTCBCCCSCC
T ss_pred EEeecCCCCceEEEEeCCCCcCCCCchhhCCCCCceeECCCCCCCcCccCC
Confidence 995432332 27999999999999999999999999999999999999998
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.96 E-value=6.5e-28 Score=242.32 Aligned_cols=250 Identities=16% Similarity=0.236 Sum_probs=183.9
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+|+++|..||++|+++|++.||+++.+++|+++..++ +.+++|.... +| .+.+++|++||+|||++|
T Consensus 96 ~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~-----~~-------~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 96 GYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH-----NN-------EIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE-----TT-------EEEEEEEEEEEECCCTTC
T ss_pred eEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecc-----cc-------cceEEEEeEEEeCCcccc
Confidence 6899999999999999999999999999999999886 6777776542 22 236899999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecCCC
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYH 166 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~~~ 166 (442)
.+++++ |+.. .....+.....+. +........++....+++... ..|+.|++|.+++.++||++...+..
T Consensus 163 ~vr~~~----g~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~vg~~~~~~~~ 232 (397)
T 3oz2_A 163 EFGRWA----GLKS-VILARNDIISALQ--YRMINVDVDPDYTDFYLGSIA---PAGYIWVFPKGEGMANVGIGSSINWI 232 (397)
T ss_dssp HHHHHH----TCGG-GCCCGGGEEEEEE--EEEESCCCCTTEEEEECSTTS---TTEEEEEEEEETTEEEEEEEEETTTS
T ss_pred HHHHHc----CCCc-ccccceeeeeeEE--EEeeccccCcccceeeeeccC---CCceEEEeecccceeEEEEeeccchh
Confidence 999865 7653 1222223333222 222223334555555665432 35788999999999999998876654
Q ss_pred CCCCChHHHHHHHH-hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHHHHH
Q 013495 167 NPFLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGML 245 (442)
Q Consensus 167 ~~~~~~~~~~~~~~-~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~l 245 (442)
....++.+.++++. .+|. +..++.+..-...+|..... .+.+.+|++||||||++++|++|+||++||.+|.+
T Consensus 233 ~~~~~~~~~l~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~--~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~ 306 (397)
T 3oz2_A 233 HNRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSKVK--MPITMPGLMLVGDAARLIDPITGGGIANAIVSGMY 306 (397)
T ss_dssp CSHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCCCC--SCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHhCcc----ccccceeeeeeccccccCcc--cceeeeeEEEcccccccCCCCcchhHHHHHHHHHH
Confidence 43334555666664 4443 33455555555566765543 36788999999999999999999999999999999
Q ss_pred HHHHHHhhhcc----CchHHHHHHHHHHhhhHHHHHHHHchhhhh
Q 013495 246 AAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 286 (442)
Q Consensus 246 AAeai~~al~~----~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~ 286 (442)
||++|.+++.. .+.|+.|++.++++| .++......+++.|
T Consensus 307 ~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~-~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 307 AAQVTKEAIESNDYSPQMMQKYEKLIKERF-ERKHLRNWVAKEKL 350 (397)
T ss_dssp HHHHHHHHHHHTCCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999999875 356999999999987 66665555555554
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.93 E-value=4.5e-24 Score=215.57 Aligned_cols=252 Identities=15% Similarity=0.203 Sum_probs=186.9
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+|+++|..|+++|.++|++.|++|+.+++|+++..++ +.+.||++.+. + .+.+++|++||+|||.+|
T Consensus 96 ~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~-----~-------~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 96 GYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHN-----N-------EIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEET-----T-------EEEEEEEEEEEECCCTTC
T ss_pred eEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEEC-----C-------eEEEEEcCEEEECCCcch
Confidence 7899999999999999999999999999999999885 77777887431 1 246899999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecCCC
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYH 166 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~~~ 166 (442)
.+++++ |+.. ....+..+..++.. .++.....+.....+++. .. ..|+.|++|.+++.+++|++...+..
T Consensus 163 ~~~~~~----g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~--~~g~~~~~P~~~~~~~vg~~~~~~~~ 232 (397)
T 3cgv_A 163 EFGRWA----GLKS-VILARNDIISALQY--RMINVDVDPDYTDFYLGS-IA--PAGYIWVFPKGEGMANVGIGSSINWI 232 (397)
T ss_dssp HHHHHH----TCCT-TCCCGGGEEEEEEE--EEESCCCCTTEEEEECST-TS--TTEEEEEEEEETTEEEEEEEEETTTC
T ss_pred HhHHhc----CCCc-cCCChhheeEEEEE--EeccCCCCCCcEEEEeCC-cC--CCceEEEEECCCCeEEEEEEeccccc
Confidence 888865 6651 02234455555542 333333345555555553 11 35778999999989999998875532
Q ss_pred CCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHHHHHH
Q 013495 167 NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLA 246 (442)
Q Consensus 167 ~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lA 246 (442)
....++.+.+++|...- +.+..++.+......+|..+. .++.+.+|++++||||++++|++|+|+++||.+|..+
T Consensus 233 ~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~l 307 (397)
T 3cgv_A 233 HNRFELKNYLDRFIENH---PGLKKGQDIQLVTGGVSVSKV--KMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp SCHHHHHHHHHHHHHTC---HHHHTSEEEEEEEEEEECCCC--CSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhC---cCCCCCeEEeeeeeeeecCCC--ccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHH
Confidence 22124555666664321 123455666655566777543 4678899999999999999999999999999999999
Q ss_pred HHHHHhhhcc----CchHHHHHHHHHHhhhHHHHHHHHchhhhhh
Q 013495 247 AEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 287 (442)
Q Consensus 247 Aeai~~al~~----~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~~ 287 (442)
|+++.+++.. ...|..|++.+++. +.+++...+.+..++.
T Consensus 308 a~~l~~~~~~~~~~~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~~ 351 (397)
T 3cgv_A 308 AQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKLA 351 (397)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999988743 25689999999887 4888998888887663
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.92 E-value=4.8e-23 Score=213.75 Aligned_cols=257 Identities=15% Similarity=0.142 Sum_probs=181.5
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+|.++|..|+++|.++|++.|++|+.+++|+++..++ +.|++|++.+. .+|+ ..+++|++||+|||.+|
T Consensus 94 ~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~---~~G~-------~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 94 GFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNR---RTNE-------ELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTTE-------EEEEECSEEEECCGGGC
T ss_pred cEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEc---CCCc-------eEEEEcCEEEECcCCch
Confidence 5889999999999999999999999999999998876 67777776520 0331 24899999999999999
Q ss_pred cccHHHHHhcCCccc--ccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecC
Q 013495 87 SLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN 164 (442)
Q Consensus 87 ~lar~l~~~~gl~~~--~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~ 164 (442)
.+.+++ +...+ ....+..+..+++..+.++.....++....+++.+.. ..|+.|+||.+++.++||+++..+
T Consensus 163 ~vr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~P~~~~~~~vg~~~~~~ 236 (453)
T 3atr_A 163 SFRSKL----PPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETS--PGGYWWYFPKGKNKVNVGLGIQGG 236 (453)
T ss_dssp TTGGGS----CTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTS--TTSCEEEEEEETTEEEEEEEEESS
T ss_pred hhHHhc----CCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCC--CCcEEEEEECCCCeEEEEEEecCC
Confidence 998754 55310 0112234566666666655433234444444554322 247789999988899999988644
Q ss_pred CCCCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHHHH
Q 013495 165 YHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGM 244 (442)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~ 244 (442)
.. ..++.+.++.+... +.+.+.+.+.++.....+|..+ .+++++.+|++||||||++++|++|+|++.||.+|.
T Consensus 237 ~~--~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~ 310 (453)
T 3atr_A 237 MG--YPSIHEYYKKYLDK--YAPDVDKSKLLVKGGALVPTRR--PLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGY 310 (453)
T ss_dssp SC--CCCHHHHHHHHHHH--HCTTEEEEEEEEEEEEEEECSS--CCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHH
T ss_pred CC--CCCHHHHHHHHHHh--hhhhcCCCeEEeccceeccCCC--CCCceecCCEEEEeCcccCCCCCccccHHHHHHHHH
Confidence 21 22345555544311 1122333345544444556532 356788999999999999999999999999999999
Q ss_pred HHHHHHHhhhcc----CchHHHHHHHHHHhhhHHHHHHHHchhhhhh
Q 013495 245 LAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 287 (442)
Q Consensus 245 lAAeai~~al~~----~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~~ 287 (442)
.+|+++.+++.. .+.|..|++.++..+ .+.+...+.++.++.
T Consensus 311 ~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~-~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 311 CAAKAILSAFETGDFSASGLWDMNICYVNEY-GAKQASLDIFRRFLQ 356 (453)
T ss_dssp HHHHHHHHHHHHTCCSTTTTTHHHHHHHHHT-HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999988753 467999999999874 777777777766553
No 5
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.90 E-value=5.8e-23 Score=209.74 Aligned_cols=283 Identities=15% Similarity=0.126 Sum_probs=182.3
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.+|.++|..|+++|.++|++.|++|+.+++|+++..++++.++.|++.+ |+ ..+++|++||+|||.+
T Consensus 99 ~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~------g~-------~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 99 WTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN------GN-------KREIEARFIIDASGYG 165 (421)
T ss_dssp CEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT------SC-------EEEEEEEEEEECCGGG
T ss_pred ceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC------CC-------EEEEEcCEEEECCCCc
Confidence 3689999999999999999999999999999999988766556666643 31 1379999999999999
Q ss_pred CcccHHHHHhcCCcccccCCCceEEEEEEEEEee--CCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec
Q 013495 86 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEI--DEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~--~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~ 163 (442)
|.+.+. ++++. ....+...++-. .+.. +.....++....++. + ....|+.|++|.+++.++||++...
T Consensus 166 s~l~~~----~g~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~~~~~P~~~~~~~vg~~~~~ 235 (421)
T 3nix_A 166 RVIPRM----FGLDK-PSGFESRRTLFT--HIKDVKRPVAAEMEGNRITAV-V--HKPKVWIWVIPFSNGNTSVGFVGEP 235 (421)
T ss_dssp CHHHHH----TTCEE-CCSSCCCEEEEE--EEECTTCCC----CCSEEEEE-E--EETTEEEEEEECTTSEEEEEEEECH
T ss_pred hhhHHh----cCCCC-CCcCCCcEEEEE--EECCCcCCCccCCCCeEEEEE-e--CCCCEEEEEEEECCCCEEEEEEecH
Confidence 988765 47663 122222333211 1211 111111122222221 1 0134677889999999999999876
Q ss_pred CCCCC-CCChHHHHHHHH-hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHH
Q 013495 164 NYHNP-FLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMK 241 (442)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~-~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~ 241 (442)
+.... ..++.+.++.+. .+|.+.+.+.+.+... ..+.++.... ..++.+.+|+++|||||++++|++|+|++.||.
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~~-~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~ 313 (421)
T 3nix_A 236 SYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLF-EPRTIEGYAI-SASKLYGDGFVLTGNATEFLDPIFSSGATFAME 313 (421)
T ss_dssp HHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSS-CCEEEECCCB-EESCSEETTEEECGGGTCBCCSTTCCHHHHHHH
T ss_pred HHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCcccc-Cceeecccce-eeeeeccCCEEEecccccccCCcccccHHHHHH
Confidence 53222 235677777664 6788777776654331 1122222111 245778899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccC--chHHHHHHHHHHhhh-HHHH---HHHHchhhhhh----hCChHHHHHHHHHHHHhcCCCCCc
Q 013495 242 SGMLAAEAGFGVLHED--SNMEIYWDTLQKSWV-WQEL---QRARNYRPAFE----YGLLPGLAICGLEHYILRGKSPYT 311 (442)
Q Consensus 242 SG~lAAeai~~al~~~--~~l~~Y~~~~~~~~~-~~el---~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 311 (442)
+|.++|++|.+++.+. +.+..|.+.++..+- .+++ ....+++.+|. .-.+..++.+.+..+++....||.
T Consensus 314 ~a~~la~~l~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~p~~ 393 (421)
T 3nix_A 314 SGSKGGKLAVQFLKGEEVNWEKDFVEHMMQGIDTFRSFVTGWYDGTLHAVFFAKNPDPDHKRMICSVLAGYVWDKNNPFV 393 (421)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHHHHHHHHHHSHHHHHHTCSSCCHHHHHHHHHHHTTCTTCTTSHHH
T ss_pred HHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhhhhhhCcCCChhHHHHHHHHhhhhhcCCCCccc
Confidence 9999999999988763 456778877765431 1111 11123333332 122345555555555566777886
Q ss_pred cc
Q 013495 312 LK 313 (442)
Q Consensus 312 ~~ 313 (442)
.+
T Consensus 394 ~~ 395 (421)
T 3nix_A 394 KK 395 (421)
T ss_dssp HT
T ss_pred cc
Confidence 43
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.88 E-value=4.4e-21 Score=202.25 Aligned_cols=241 Identities=18% Similarity=0.203 Sum_probs=169.1
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.+|+++|..|+++|.+.|++.||+|+.+++|+++..++ +.|.+|++.+ .+|+ ..+++|++||+|||.+
T Consensus 104 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~----~dG~-------~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 104 FAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRN----TEGV-------ELMAHARFIVDASGNR 171 (512)
T ss_dssp CEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEEC----SSSC-------EEEEEEEEEEECCCTT
T ss_pred eeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEe----CCCC-------EEEEEcCEEEECCCcc
Confidence 36889999999999999999999999999999999876 6787887753 3342 1589999999999999
Q ss_pred CcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCC--CCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec
Q 013495 86 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGK--HNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~--~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~ 163 (442)
|.+.+++ |.+. .... ....++..++...... ...+...+... ..|+.|++|+.++.+++|++...
T Consensus 172 S~vr~~l----g~~~--~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------~~G~~~~~Pl~~~~~~vg~~~~~ 238 (512)
T 3e1t_A 172 TRVSQAV----GERV--YSRF-FQNVALYGYFENGKRLPAPRQGNILSAAF------QDGWFWYIPLSDTLTSVGAVVSR 238 (512)
T ss_dssp CSSGGGT----CCEE--ECST-TCEEEEEEEEESCCCCSTTCTTSEEEEEE------TTEEEEEEECSSSEEEEEEEEEH
T ss_pred hHHHHHc----CCCc--cCch-hcceEEEEEecCCccCCCCCcCceEEEEe------CCceEEEEEeCCCeEEEEEEecH
Confidence 9998864 6642 1111 1133444344422111 11222333221 24677889999889999999876
Q ss_pred CCCCCC-CChHHHHHHH-HhCCCcccccCCCeEEee-cceeecc-CCCc-cCCccccCCEEEEccCCCcccCcccccHHH
Q 013495 164 NYHNPF-LNPYEEFQKF-KHHPAIKPLLEGGTVVQY-GARTLNE-GGLQ-SIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 238 (442)
Q Consensus 164 ~~~~~~-~~~~~~~~~~-~~~P~i~~~l~~~~~~~~-ga~~i~~-gg~~-~~~~~~~~g~llvGDAAg~vdp~~g~GI~~ 238 (442)
+..... .++.+.++.+ ..+|.+.+++...+.+.. ....++. ..+. ..++.+.+|++||||||++++|++|+|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~ 318 (512)
T 3e1t_A 239 EAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHL 318 (512)
T ss_dssp HHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHH
T ss_pred HHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHH
Confidence 543322 2466677666 467777777766554321 1111111 1111 235778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc----CchHHHHHHHHHHhh
Q 013495 239 AMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSW 271 (442)
Q Consensus 239 Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~~~ 271 (442)
||.++..+|++|..++.+ ...|..|++.+++.|
T Consensus 319 Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~ 355 (512)
T 3e1t_A 319 ATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREY 355 (512)
T ss_dssp HHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 999999999999988865 246899999988764
No 7
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.81 E-value=4.1e-19 Score=190.49 Aligned_cols=238 Identities=16% Similarity=0.151 Sum_probs=162.1
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.+|.++|..|+++|.+.|++.||+++.+++|+++..++ +.+++|++.+ +|+ ..+++|++||+|||.+
T Consensus 121 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~-----~G~-------~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 121 HAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRR-----GGE-------SVTVESDFVIDAGGSG 187 (591)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEE-----TTE-------EEEEEESEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEec-----CCc-------eEEEEcCEEEECCCCc
Confidence 46899999999999999999999999999999998764 6677888762 221 2589999999999999
Q ss_pred CcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCC--CCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec
Q 013495 86 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~--~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~ 163 (442)
|.+++++ ++.. ........++...+..... ....+....... ..|+.|++|..++.++++++...
T Consensus 188 S~lr~~l----g~~~---~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~------~~G~~w~iPl~~~~~sv~~~~~~ 254 (591)
T 3i3l_A 188 GPISRKL----GVRQ---YDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITF------EDGWVWMIPIKDDLYSVGLVVDR 254 (591)
T ss_dssp CHHHHHH----TCEE---EEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEE------TTEEEEEEECSSSEEEEEEEEEG
T ss_pred chhHHHc----CCCC---CCccccceEEEEEEecCccccCCCCCceEEEEc------CCcEEEEEECCCCeEEEEEEcCH
Confidence 9988864 6652 1111112233323332111 111223332221 24777889998889999998875
Q ss_pred CCCCC--CCChHHHHHHHH-hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHH
Q 013495 164 NYHNP--FLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAM 240 (442)
Q Consensus 164 ~~~~~--~~~~~~~~~~~~-~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am 240 (442)
+.... ..++.+.++.+. ..|.+.+.+.+++.+.. .+.++..... .++.+.+|+++|||||++++|+.|+|++.||
T Consensus 255 ~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl 332 (591)
T 3i3l_A 255 SKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDE-VRIVQDWSYD-TEVFSADRFFLCGDAACFTDPLFSQGVHLAS 332 (591)
T ss_dssp GGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSC-CEEEEEEEEE-ESCSEETTEEECGGGTCBCCGGGCCHHHHHH
T ss_pred HHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccC-ceEecccccc-hhhcccCCEEEEccccccCCCcccccHHHHH
Confidence 42210 123445555553 45655566665544321 1222221111 3577899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcc----CchHHHHHHHHHHhh
Q 013495 241 KSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSW 271 (442)
Q Consensus 241 ~SG~lAAeai~~al~~----~~~l~~Y~~~~~~~~ 271 (442)
.+|..+|++|.+++.. ...+..|++.++..|
T Consensus 333 ~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~ 367 (591)
T 3i3l_A 333 QSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAY 367 (591)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 9999999999988765 235788998887764
No 8
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.80 E-value=4e-18 Score=173.64 Aligned_cols=245 Identities=15% Similarity=0.065 Sum_probs=159.2
Q ss_pred cCCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 5 HNGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 5 ~~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
...|.++|..|+++|.+.|++ ++|+.+++|+++..++++ +.|++.+ |.+++|++||+|||.
T Consensus 119 ~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~---------------g~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 119 SRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADG--VTVWFTD---------------GSSASGDLLIAADGS 179 (407)
T ss_dssp SCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTE--EEEEETT---------------SCEEEESEEEECCCT
T ss_pred CceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCc--EEEEEcC---------------CCEEeeCEEEECCCc
Confidence 457999999999999999988 999999999999988643 4566653 458999999999999
Q ss_pred CCcccHHHHHhcCCcccccCCCceEEE-EEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec
Q 013495 85 RGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163 (442)
Q Consensus 85 ~s~lar~l~~~~gl~~~~~~~~~~~~~-g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~ 163 (442)
+|.+++++ ++.. ..+..... .+.....++...........+++ ..++.|+||.+++.+.+.+.+..
T Consensus 180 ~S~vr~~l---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~p~~~~~~~~~~~~~~ 246 (407)
T 3rp8_A 180 HSALRPWV---LGFT----PQRRYAGYVNWNGLVEIDEALAPGDQWTTFVG------EGKQVSLMPVSAGRFYFFFDVPL 246 (407)
T ss_dssp TCSSHHHH---HSSC----CCCEEEEEEEEEEEEECCTTTCCTTEEEEEEE------TTEEEEEEEETTTEEEEEEEEEC
T ss_pred ChHHHHHh---cCCC----CCCcccCcEEEEEEEecccccCCCCceEEEEC------CCcEEEEEEcCCCeEEEEEEeCC
Confidence 99998865 2443 11222121 23333344433222232333332 23667889999988888887754
Q ss_pred CCCCC-C-CChHHHHH-HHHh-CCCcccccCC---CeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccH
Q 013495 164 NYHNP-F-LNPYEEFQ-KFKH-HPAIKPLLEG---GTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGT 236 (442)
Q Consensus 164 ~~~~~-~-~~~~~~~~-~~~~-~P~i~~~l~~---~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI 236 (442)
+...+ . ....+.+. .|.. +|.+..+++. ...+.+. ..+... .++++.++++||||||++++|++|+|+
T Consensus 247 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~rv~LvGDAAh~~~P~~GqG~ 321 (407)
T 3rp8_A 247 PAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIE--IHDIEP---FSRLVRGRVALLGDAGHSTTPDIGQGG 321 (407)
T ss_dssp CTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEE--EEECCC---CSCCEETTEEECGGGTCCCCGGGSCHH
T ss_pred CcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEe--eEecCC---CCceecCCEEEEEcccccCCcchhhhH
Confidence 32111 1 11222222 2221 2223222211 1111111 122211 257788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHhhhHHHHHHHHchhhhhh
Q 013495 237 HTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAFE 287 (442)
Q Consensus 237 ~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~~ 287 (442)
+.||.++..+|+++.+.......|..|++..+.. ...-+..++.+..+|+
T Consensus 322 ~~al~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~~ 371 (407)
T 3rp8_A 322 CAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDR-VRDLVLKARKRCDITH 371 (407)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhh
Confidence 9999999999999986431146789999998876 3555666777777664
No 9
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.75 E-value=4.4e-17 Score=171.17 Aligned_cols=220 Identities=15% Similarity=0.120 Sum_probs=144.7
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+|.++|..|+++|.++|++.||+++.+ +|+++..++++.+++|++.+ |.+++|++||+|||.+|
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGFRG 230 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGGGC
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCcch
Confidence 589999999999999999999999999 99999987667888888764 35899999999999999
Q ss_pred cccHHHHHhcCCcccc--cCCCceEEEEEEEEEeeCCC-CCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec
Q 013495 87 SLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEG-KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 163 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~--~~~~~~~~~g~ke~~~~~~~-~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~ 163 (442)
.+.+++ +|..... ...+...++++. ...+.. ...+. ...... ..|+.|++|..+ .+++|++...
T Consensus 231 ~~~~~~---~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~------~~g~~~~~P~~~-~~~~g~~~~~ 297 (511)
T 2weu_A 231 LLINQT---LGGRFQSFSDVLPNNRAVALR--VPRENDEDMRPY-TTATAM------SAGWMWTIPLFK-RDGNGYVYSD 297 (511)
T ss_dssp CCCCCC---TCCCEEECTTTCCCCEEEEEE--EECSSGGGCCSS-EEEEEE------TTEEEEEEECSS-EEEEEEEECT
T ss_pred HHHHHH---hCCCCccccccCcccceEEEE--eccCCCCCCCcc-eeceec------CCCcEEEEECCC-ceEEEEEECC
Confidence 986542 3543100 112233344433 222211 01222 222211 236678889876 6888886642
Q ss_pred CCCCCCCChHHHHHHHH----hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHH
Q 013495 164 NYHNPFLNPYEEFQKFK----HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTA 239 (442)
Q Consensus 164 ~~~~~~~~~~~~~~~~~----~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~A 239 (442)
+ ..++.+..+.+. ..|. +.....+.... ++ .++...+|++||||||++++|+.|+||+.|
T Consensus 298 ~----~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~------~~--~~~~~~~rv~liGDAAh~~~P~~g~G~~~a 361 (511)
T 2weu_A 298 E----FISPEEAERELRSTVAPGRD----DLEANHIQMRI------GR--NERTWINNCVAVGLSAAFVEPLESTGIFFI 361 (511)
T ss_dssp T----TSCHHHHHHHHHHHHCTTCT----TSCCEEEECCC------EE--ESCSEETTEEECGGGTEECCGGGCCHHHHH
T ss_pred C----CCCHHHHHHHHHHHhCcccc----cccceeEEeec------cc--cccccCCCEEEEechhhccCccccccHHHH
Confidence 2 233433333332 2222 22233332111 11 346678999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCchHHHHHHHHHHhh
Q 013495 240 MKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSW 271 (442)
Q Consensus 240 m~SG~lAAeai~~al~~~~~l~~Y~~~~~~~~ 271 (442)
|.+|..+|+.+...-.....|..|++.++..+
T Consensus 362 ~~da~~La~~l~~~~~~~~~l~~Y~~~~~~~~ 393 (511)
T 2weu_A 362 QHAIEQLVKHFPGERWDPVLISAYNERMAHMV 393 (511)
T ss_dssp HHHHHHHHHTCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 99999999887531111356899998887653
No 10
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.74 E-value=2e-17 Score=167.85 Aligned_cols=247 Identities=13% Similarity=0.020 Sum_probs=156.2
Q ss_pred CEEEehHHHHHHHHHHHHHC-CcEEecCCeEeEEEEcCCCcEE-EEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 7 GNRKSLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVI-GIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~~~g~v~-gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
++.++|..|+++|.+++++. |++|+.+++|+++..++++ |+ .|++.+ |.+++|++||+|||.
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~---------------g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 101 FILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLND---------------GRVLRPRVVVGADGI 164 (399)
T ss_dssp EEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETT---------------SCEEEEEEEEECCCT
T ss_pred cccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECC---------------CCEEECCEEEECCCC
Confidence 47899999999999999998 9999999999999987644 43 566653 358999999999999
Q ss_pred CCcccHHHHHhcCCcccccC--CCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEe
Q 013495 85 RGSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA 162 (442)
Q Consensus 85 ~s~lar~l~~~~gl~~~~~~--~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~ 162 (442)
+|.+++.+ +... ... .......++...+..+. +... ++++ | ..|+.|+||.+++.+.+.+...
T Consensus 165 ~s~vr~~l----g~~~-~~~~p~~~~~~~~~~~~~~~~~----~~~~-~~~~-~----~~~~~~~~p~~~~~~~~~~~~~ 229 (399)
T 2x3n_A 165 ASYVRRRL----LDID-VERRPYPSPMLVGTFALAPCVA----ERNR-LYVD-S----QGGLAYFYPIGFDRARLVVSFP 229 (399)
T ss_dssp TCHHHHHT----SCCC-CCCCCCSSCEEEEEEECCHHHH----HCEE-EEEC-T----TSCEEEEEEETTTEEEEEEECC
T ss_pred ChHHHHHh----CCCc-cccCCCCCCceEEEEEEecCCC----CCcc-EEEc-C----CCcEEEEEEcCCCEEEEEEEeC
Confidence 99987754 6542 111 11110033322222110 1112 3332 1 0366788999876655544333
Q ss_pred cCC-CC--CCCChHHHHHHHHhC-CCcc-cccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHH
Q 013495 163 LNY-HN--PFLNPYEEFQKFKHH-PAIK-PLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTH 237 (442)
Q Consensus 163 ~~~-~~--~~~~~~~~~~~~~~~-P~i~-~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~ 237 (442)
.+. .. ...++.+..+.|... |.+. ..++.... + .....|.......++++.++++||||||++++|++|+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 307 (399)
T 2x3n_A 230 REEARELMADTRGESLRRRLQRFVGDESAEAIAAVTG-T-SRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMN 307 (399)
T ss_dssp HHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCC-S-TTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHH
T ss_pred ccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCc-c-ceEEechhhcccccccccCcEEEEechhccCCCcccccHH
Confidence 211 00 002334444455432 3331 12211110 0 0011232221224567889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcc----CchHHHHHHHHHHhhhHHHHHHHHchhhhhh
Q 013495 238 TAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 287 (442)
Q Consensus 238 ~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~~ 287 (442)
.||.+|..+|+.+.+.+.. ...|+.|++.++... .+-+..++.+..+|.
T Consensus 308 ~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~-~~~~~~s~~~~~~~~ 360 (399)
T 2x3n_A 308 LAIEDASALADALDLALRDACALEDALAGYQAERFPVN-QAIVSYGHALATSLE 360 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHH-HHHHHHHHHhhhhhc
Confidence 9999999999999988752 356899999988763 555666677766664
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.72 E-value=2e-16 Score=160.14 Aligned_cols=248 Identities=12% Similarity=0.053 Sum_probs=147.6
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
..+.++|..|++.|.+++++.|++|+.+++|+++..++++. +.|++.+ +|+ ..+++|++||+|||.+
T Consensus 96 ~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~~-----~g~-------~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 96 TVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFER-----DGE-------RLRLDCDYIAGCDGFH 162 (394)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEEE-----TTE-------EEEEECSEEEECCCTT
T ss_pred ceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEec-----CCc-------EEEEEeCEEEECCCCC
Confidence 35778999999999999999999999999999998764232 3465521 121 1279999999999999
Q ss_pred CcccHHHHHhcCCcccccCCCceEEEEEEEEE-eeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecC
Q 013495 86 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN 164 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~-~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~ 164 (442)
|.+.+++ +... .......+..+...+. ..++. .+. ..+.. . ..|+.|+++.+++..++.+.+...
T Consensus 163 S~vr~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~-~-----~~g~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T 1k0i_A 163 GISRQSI----PAER-LKVFERVYPFGWLGLLADTPPV--SHE-LIYAN-H-----PRGFALCSQRSATRSQYYVQVPLS 228 (394)
T ss_dssp CSTGGGS----CGGG-CEEEEEEEEEEEEEEEESSCCS--CSS-CEEEC-C-----TTCCEEEEEEETTEEEEEEEECTT
T ss_pred cHHHHhc----Cccc-cccccccccceeEEEecCCCCC--ccc-eEEEE-c-----CCceEEEEecCCCcEEEEEEeCCC
Confidence 9998754 4431 0000111222222211 11211 122 22111 1 124556666666777877765432
Q ss_pred CCCCCCChHHHHHHHHhC-CC-cccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHH
Q 013495 165 YHNPFLNPYEEFQKFKHH-PA-IKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKS 242 (442)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-P~-i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~S 242 (442)
-.....++.+.++.+.+. +. +...+..+..+.. ...|...+. .+++..++++||||||+.++|+.|+|++.||.+
T Consensus 229 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~d 305 (394)
T 1k0i_A 229 EKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSFV-VEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASD 305 (394)
T ss_dssp CCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEEE-EECSEETTEEECGGGTEECCGGGTCHHHHHHHH
T ss_pred CCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhhh-ccccccCCEEEEechhhcCCCcccchHHHHHHH
Confidence 111123344444444321 11 1111222222221 112222111 245678999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc--CchHHHHHHHHHHhhhHHHHHHHHchhh
Q 013495 243 GMLAAEAGFGVLHE--DSNMEIYWDTLQKSWVWQELQRARNYRP 284 (442)
Q Consensus 243 G~lAAeai~~al~~--~~~l~~Y~~~~~~~~~~~el~~~r~~~~ 284 (442)
+..+|+.+.+++.. ...|+.|++..+.. ..+-...++.+..
T Consensus 306 a~~La~~L~~~~~~~~~~~L~~Y~~~r~~~-~~~~~~~s~~~~~ 348 (394)
T 1k0i_A 306 VSTLYRLLLKAYREGRGELLERYSAICLRR-IWKAERFSWWMTS 348 (394)
T ss_dssp HHHHHHHHHHHHHHCCGGGGGGHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCchHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 99999999887643 56789999888764 2333334443333
No 12
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.71 E-value=9.9e-16 Score=163.64 Aligned_cols=246 Identities=13% Similarity=0.034 Sum_probs=148.9
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCc-eEEEEcEEEeccCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG-VELRGRITLLAEGC 84 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g-~~i~Ak~vI~AdG~ 84 (442)
..++++|..|++.|.++|++.|++|+.+++|+++..++++. .|++.+ .+ | .+++|++||+|||.
T Consensus 141 ~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v--~v~~~~----~~---------G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 141 YTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV--EVTVAG----PS---------GPYPVRARYGVGCDGG 205 (570)
T ss_dssp SBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE--EEEEEE----TT---------EEEEEEESEEEECSCS
T ss_pred eeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE--EEEEEe----CC---------CcEEEEeCEEEEcCCC
Confidence 35789999999999999999999999999999998877552 354421 11 3 68999999999999
Q ss_pred CCcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEE-EEcCCCeE-EEEEEEe
Q 013495 85 RGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFL-YHMNDRQI-ALGLVVA 162 (442)
Q Consensus 85 ~s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwi-y~~~~~~v-sVGlv~~ 162 (442)
+|.+.+++ |+.. ......... +...+..+.. ... ..|. ....|..|+ ||.+++.. ++.+...
T Consensus 206 ~S~vR~~l----Gi~~-~~~~~~~~~--~~~~v~~~~~----~~~---~~~~--~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 206 RSTVRRLA----ADRF-PGTEATVRA--LIGYVTTPER----EVP---RRWE--RTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp SCHHHHHT----TCCC-CCCCCCEEE--EEEECCCCSC----SSC---CCCC--CCCSSCEEECCCC------CEEEEEE
T ss_pred CchHHHHc----CCCC-ccceeeeEE--EEEEEEecCC----Ccc---eEEE--ecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 99987754 6652 122222222 2111222211 111 1121 113455566 78888777 7777654
Q ss_pred cCCC---CCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHH
Q 013495 163 LNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTA 239 (442)
Q Consensus 163 ~~~~---~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~A 239 (442)
.... ....++.+..+.+... +...+...+...+-. ..+... ...+++..++++|+||||+.++|+.|+|++.|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~-~~~~~~-~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~g 345 (570)
T 3fmw_A 270 GHSPAADEGPVTLEDLGAAVARV--RGTPLTLTEPVSWLS-RFGDAS-RQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTG 345 (570)
T ss_dssp SCC-----CCCCHHHHHHHTTSS--SSCCCCCCSCCEEEE-EECCCC-EECSCSEETTEEECGGGTEECCCCSSCHHHHH
T ss_pred CCCccccccCCCHHHHHHHHHHH--hhcccccceeeeeeE-Eeeccc-ccccccccCCEEEEEecceecCCCcCcCHhHH
Confidence 3211 1123444444454421 111111111111110 112111 12457788999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcc---CchHHHHHHHHHHhhhHHHHHHHHchhhhhh
Q 013495 240 MKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 287 (442)
Q Consensus 240 m~SG~lAAeai~~al~~---~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~~ 287 (442)
|.++..+|+.+.+.+.+ ...|..|++..+.. ..+=+...+.+..+|.
T Consensus 346 l~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 395 (570)
T 3fmw_A 346 LQDAVNLGWKLAARVRGWGSEELLDTYHDERHPV-AERVLLNTRAQLALMR 395 (570)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999999988765 46689999988764 2333444444444443
No 13
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.71 E-value=3.9e-16 Score=165.95 Aligned_cols=225 Identities=13% Similarity=0.069 Sum_probs=141.8
Q ss_pred CEEEehHHHHHHHHHHHHHC-CcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+|.++|..|+++|.+.|++. ||+++.+ +|+++..+++|.+++|++.+ |.+++|++||+|+|.+
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGFR 251 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGGG
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCCc
Confidence 58899999999999999998 9999999 99999987667888898864 4579999999999999
Q ss_pred CcccHHHHHhcCCcccccC---CCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEe
Q 013495 86 GSLSEKLIKNFKLREKSHA---QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA 162 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~---~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~ 162 (442)
|.+.+++ +|... ... .+...++.+......+.....+. ...... ..|+.|++|+.+ ...+|++..
T Consensus 252 S~~~~~~---lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~g~~~~ipl~~-~~~~g~v~~ 319 (550)
T 2e4g_A 252 GLLINKA---MEEPF-LDMSDHLLNDSAVATQVPHDDDANGVEPF-TSAIAM------KSGWTWKIPMLG-RFGTGYVYS 319 (550)
T ss_dssp CCCCCCC---TCCCE-EECTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEEC------SSEEEEEEECSS-EEEEEEEEC
T ss_pred hhhHHHH---hCCCc-ccccccccccceEEEeecccCCcccCCCc-eeeeec------CCceEEEccCCC-ccceEEEEe
Confidence 9984432 34431 011 12222333321111110001122 222211 236667888866 677777764
Q ss_pred cCCCCCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHH
Q 013495 163 LNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKS 242 (442)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~S 242 (442)
.++ .++.+..+.+...-...+.+...+.+.+. . ++ .++...+|++||||||++++|+.++||+.||.+
T Consensus 320 ~~~----~~~~~~~~~l~~~~~~~p~l~~~~~i~~~-----~-~~--~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~d 387 (550)
T 2e4g_A 320 SRF----ATEDEAVREFCEMWHLDPETQPLNRIRFR-----V-GR--NRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAA 387 (550)
T ss_dssp TTT----SCHHHHHHHHHHHTTCCTTTSCCEEEECC-----C-EE--ESCSEETTEEECSTTTEECCGGGSCHHHHHHHH
T ss_pred cCC----CChHHHHHHHHHhhCcCcccCCCceEEec-----C-CC--ccccccCCEEEEehhhcccCccchhhHHHHHHH
Confidence 322 23333333332110000112223333211 1 11 345778999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCchHHHHHHHHHHhh
Q 013495 243 GMLAAEAGFGVLHEDSNMEIYWDTLQKSW 271 (442)
Q Consensus 243 G~lAAeai~~al~~~~~l~~Y~~~~~~~~ 271 (442)
+..+|+.+...-.....|..|++.++..+
T Consensus 388 a~~La~~L~~~~~~~~~l~~Y~~~~~~~~ 416 (550)
T 2e4g_A 388 LYQLVKHFPDKSLNPVLTARFNREIETMF 416 (550)
T ss_dssp HHHHHHTCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 99988876431111356899999887753
No 14
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.70 E-value=8.8e-17 Score=162.30 Aligned_cols=227 Identities=13% Similarity=0.081 Sum_probs=139.7
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.++|..|++.|.+.+++.|++|+.+++|+++.. ++ .|++.+ |.+++|++||+|||.+|
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~---------------g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 101 WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQT---------------GEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETT---------------SCEEECSEEEECCCTTC
T ss_pred eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECC---------------CCEEEcCEEEECCCccH
Confidence 58999999999999999999999999999999976 35 455553 35799999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEE-EEEEEEEeeCC---CCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEe
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDE---GKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA 162 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~-~g~ke~~~~~~---~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~ 162 (442)
.+.+.+ +... .+.... ..+......+. ....++...+.+.+. . ..|+.|+||.+++.+++++...
T Consensus 161 ~vr~~l----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 161 KVRDSI----GFKQ----DRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFW-P--RVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp HHHHHH----CCCE----EEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCS-S--SCCEEEEEECSSSEEEEEEEEC
T ss_pred HHHHHh----cCCC----CcCcCCcEEEEEEechhhccCCcCCcccccccceEE-C--CCCEEEEEECCCCcEEEEEEec
Confidence 998765 4431 111111 12222222210 111123233321111 1 2467789999988888877664
Q ss_pred cCCCCCCCChHHHHHHHH-hCCCcccccCCC---eEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHH
Q 013495 163 LNYHNPFLNPYEEFQKFK-HHPAIKPLLEGG---TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 238 (442)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~-~~P~i~~~l~~~---~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~ 238 (442)
.+...+ ....+.|..|. ..|.+.++++.. +...+... ....+++++.++++||||||++++|+.|+|++.
T Consensus 230 ~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ 303 (379)
T 3alj_A 230 AADPRG-SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKY-----ETTKLDSWTRGKVALVGDAAHAMCPALAQGAGC 303 (379)
T ss_dssp TTCTTT-TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEE-----EEEEESCSEETTEEECTHHHHCCCGGGSCHHHH
T ss_pred CCCCCH-HHHHHHHhcCCchhccHHHHHhhCCccceEEeccc-----ccCCCCCcccCcEEEEEcccCCCCcchhhhHHH
Confidence 321111 11111222221 122111222110 00011100 001134667799999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCchHHHHHHHHHHh
Q 013495 239 AMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 270 (442)
Q Consensus 239 Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~~ 270 (442)
||.++..+|+.+.+.-.-...|+.|++.++..
T Consensus 304 ai~da~~La~~L~~~~~~~~~l~~Y~~~r~~~ 335 (379)
T 3alj_A 304 AMVNAFSLSQDLEEGSSVEDALVAWETRIRPI 335 (379)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHH
Confidence 99999999998865311135688999887764
No 15
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.70 E-value=2.5e-16 Score=166.84 Aligned_cols=222 Identities=12% Similarity=0.053 Sum_probs=140.7
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.|.++|..|+++|.+.|++.||+++.+ +|+++..+++|.+++|++.+ |.+++|++||+|||.+|
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGMRG 222 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGGGC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCCch
Confidence 589999999999999999999999999 89999987667778888764 35799999999999999
Q ss_pred cccHHHHHhcCCcccc--cCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecC
Q 013495 87 SLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN 164 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~--~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~ 164 (442)
.+.+++ +|..... ...+...++.+......+.....+.... ... ..|+.|++|..+ ..++|++...+
T Consensus 223 ~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~g~~~~~p~~~-~~~~g~v~~~~ 291 (538)
T 2aqj_A 223 LLINQA---LKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSS-IAM------NSGWTWKIPMLG-RFGSGYVFSSH 291 (538)
T ss_dssp CCCCCC---TCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEE-EEC------SSEEEEEEEETT-EEEEEEEECTT
T ss_pred hhHHHH---hCCCccccccccccceEEEEecccCCcccCCCCceee-eec------CCceEEEecCCC-ceEEEEEEcCC
Confidence 985432 3443100 0111223333221111000001122111 111 246778888876 57888865432
Q ss_pred CCCCCCChHH---HHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHH
Q 013495 165 YHNPFLNPYE---EFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMK 241 (442)
Q Consensus 165 ~~~~~~~~~~---~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~ 241 (442)
+ .++.+ .|.++...+. + .....+... . + ..++.+.++++||||||++++|+.|+||+.||.
T Consensus 292 ~----~~~~~~~~~l~~~~~~~~---~-~~~~~~~~~-----~-~--~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~ 355 (538)
T 2aqj_A 292 F----TSRDQATADFLKLWGLSD---N-QPLNQIKFR-----V-G--RNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYA 355 (538)
T ss_dssp T----SCHHHHHHHHHHHHTCCT---T-CCCEEEECC-----C-E--EESCSEETTEEECGGGTEECCGGGSCHHHHHHH
T ss_pred C----CChHHHHHHHHHHhcCCC---C-CCceEEeec-----c-c--cccccccCCEEEEcccccccCcchhccHHHHHH
Confidence 2 23333 3333222111 1 122222211 1 1 134678899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCchHHHHHHHHHHhh
Q 013495 242 SGMLAAEAGFGVLHEDSNMEIYWDTLQKSW 271 (442)
Q Consensus 242 SG~lAAeai~~al~~~~~l~~Y~~~~~~~~ 271 (442)
++..+|+++...-.....|..|++.++..|
T Consensus 356 da~~La~~L~~~~~~~~~l~~Y~~~~~~~~ 385 (538)
T 2aqj_A 356 ALYQLVKHFPDTSFDPRLSDAFNAEIVHMF 385 (538)
T ss_dssp HHHHHHHTCCBTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 998888766421111356899999887754
No 16
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.70 E-value=6.6e-15 Score=154.75 Aligned_cols=228 Identities=11% Similarity=-0.003 Sum_probs=146.1
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.++|..|++.|.+.|++.|++|+.+++|+++..++++ | .|++.+ .+| ..+++|++||+|||.+|
T Consensus 101 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g--------~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 101 VKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEG----PDG--------PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEEC----SSC--------EEEEEEEEEEECCCTTC
T ss_pred eEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEc----CCC--------cEEEEeCEEEEccCccc
Confidence 478999999999999999999999999999999988754 3 355543 112 14799999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecCC-
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY- 165 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~~- 165 (442)
.+.+++ |+.. ......... +...+.++. .+... ++.-. ..|..|++|.+++..++++......
T Consensus 167 ~VR~~l----g~~~-~~~~~~~~~--~~~~v~~~~---~~~~~-~~~~~-----~~g~~~~~P~~~g~~~~~~~~~~~~~ 230 (499)
T 2qa2_A 167 TVRKAA----GFDF-PGTSASREM--FLADIRGCE---ITPRP-IGETV-----PLGMVMSAPLGDGVDRIIVCERGAPA 230 (499)
T ss_dssp HHHHHT----TCCC-CEECCCCCE--EEEEEESCC---CCCEE-EEEEE-----TTEEEEEEECSSSCEEEEEEETTCCC
T ss_pred HHHHHc----CCCC-CCCCCccEE--EEEEEEECC---CCcce-EEEEC-----CCeEEEEEEcCCCEEEEEEEecCCCC
Confidence 998764 6542 111121111 211223321 12222 22111 2366788999888888877642211
Q ss_pred C--CCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHHH
Q 013495 166 H--NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 243 (442)
Q Consensus 166 ~--~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG 243 (442)
. ....++.+..+.+... +...+...+.. +-. ..+.. ....+++..++++|+||||+.++|+.|+|++.||.++
T Consensus 231 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~-~~~-~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA 305 (499)
T 2qa2_A 231 RRRTGPPPYQEVAAAWQRL--TGQDISHGEPV-WVS-AFGDP-ARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDS 305 (499)
T ss_dssp CCCSSSCCHHHHHHHHHHH--HSCCCTTCEEE-EEE-EECCC-EEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHH--hCCCCCcccee-EEE-EEeCC-cEEcccccCCCEEEEecccccCCCccccchhhhHHHH
Confidence 1 1123444444444321 00111111211 110 11111 1124566778999999999999999999999999999
Q ss_pred HHHHHHHHhhhcc---CchHHHHHHHHHH
Q 013495 244 MLAAEAGFGVLHE---DSNMEIYWDTLQK 269 (442)
Q Consensus 244 ~lAAeai~~al~~---~~~l~~Y~~~~~~ 269 (442)
..+|+.+...+.+ ...|..|++..+.
T Consensus 306 ~~La~~La~~l~g~~~~~~L~~Ye~eR~~ 334 (499)
T 2qa2_A 306 VNLGWKLAAVVSGRAPAGLLDTYHEERHP 334 (499)
T ss_dssp HHHHHHHHHHHTTSSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 9999999888765 4679999998765
No 17
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.69 E-value=3.1e-15 Score=158.16 Aligned_cols=234 Identities=15% Similarity=0.010 Sum_probs=145.7
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCc--EEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNK--VIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~--v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
.+.++|..|.+.|.++|++.|++|+.+++|+++..++++. .+.|++.+ .+| +.+++|++||+|||.
T Consensus 114 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~----~~~--------~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 114 WAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAG----PDG--------EYDLRAGYLVGADGN 181 (535)
T ss_dssp CBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEE----TTE--------EEEEEEEEEEECCCT
T ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEc----CCC--------eEEEEeCEEEECCCC
Confidence 6789999999999999999999999999999999887522 23344432 111 268999999999999
Q ss_pred CCcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCC-CeEEEEEEEec
Q 013495 85 RGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMND-RQIALGLVVAL 163 (442)
Q Consensus 85 ~s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~-~~vsVGlv~~~ 163 (442)
+|.+++++ |+.. .........+.+....+++..........+++-. ..+.+|++|..+ +...+.+....
T Consensus 182 ~S~vR~~l----gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~p~~~~~~~~~~~~~~~ 251 (535)
T 3ihg_A 182 RSLVRESL----GIGR-YGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHH-----PEFKGTFGPTDRPDRHTLFVEYDP 251 (535)
T ss_dssp TCHHHHHT----TCCE-EEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEEC-----SSCEEEEEECSSTTEEEEEEEECT
T ss_pred cchHHHHc----CCCc-CCCCccceEEEEEEeccChhhccCCceEEEEEEC-----CCceEEEEEecCCCEEEEEEeeCc
Confidence 99988864 7652 1111111222221111122111111122232212 234568889865 56666555444
Q ss_pred CCCC--CCCChHHHHHHHH---hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHH
Q 013495 164 NYHN--PFLNPYEEFQKFK---HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 238 (442)
Q Consensus 164 ~~~~--~~~~~~~~~~~~~---~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~ 238 (442)
+... +..++.+..+.+. ..+... -+...... .+.. ....+++..++++|+||||+.++|+.|+|+++
T Consensus 252 ~~~~~~~~~~~e~~~~~l~~~~~~~~~~-----~~~~~~~~--~~~~-~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ 323 (535)
T 3ihg_A 252 DEGERPEDFTPQRCVELIGLALDAPEVK-----PELVDIQG--WEMA-ARIAERWREGRVFLAGDAAKVTPPTGGMSGNA 323 (535)
T ss_dssp TTTCCGGGCCHHHHHHHHHHHHTCSSCC-----CEEEEEEE--EEEE-EEEESCSEETTEEECTTTTEECCSTTSCHHHH
T ss_pred cccCccccCCHHHHHHHHHHHhCCCCCc-----eeEEEeeE--eeee-EEEECccccCCEEEEecccccCCCccCCcccc
Confidence 3211 1234433333332 222211 12222111 1111 01235677899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc---CchHHHHHHHHHHh
Q 013495 239 AMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKS 270 (442)
Q Consensus 239 Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~~ 270 (442)
||.++..+|+.+...+++ ...|..|++..+..
T Consensus 324 ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~ 358 (535)
T 3ihg_A 324 AVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVA 358 (535)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHH
Confidence 999999999999988765 56799999988764
No 18
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.69 E-value=5.8e-15 Score=155.24 Aligned_cols=228 Identities=11% Similarity=0.002 Sum_probs=145.6
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.++|..|++.|.+.|++.|++|+.+++|+++..++++ | .|++.+ .+| ..+++|++||+|||.+|
T Consensus 100 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g--------~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 100 AKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRG----PEG--------KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEE----TTE--------EEEEEESEEEECCCTTC
T ss_pred eeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEc----CCC--------CEEEEeCEEEECCCcch
Confidence 489999999999999999999999999999999988743 3 355543 111 14799999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecCCC
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYH 166 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~~~ 166 (442)
.+.+++ |+.. ........ ++...+.++. .+......+ . ..|..|++|.+++..++++.......
T Consensus 166 ~VR~~l----g~~~-~~~~~~~~--~~~~~~~~~~---~~~~~~~~~-~-----~~g~~~~~p~~~g~~~~~~~~~~~~~ 229 (500)
T 2qa1_A 166 SVRKAA----GFDF-PGTAATME--MYLADIKGVE---LQPRMIGET-L-----PGGMVMVGPLPGGITRIIVCERGTPP 229 (500)
T ss_dssp HHHHHT----TCCC-CEECCCCE--EEEEEEESCC---CCCEEEEEE-E-----TTEEEEEEEETTTEEEEEEEETTCCC
T ss_pred HHHHHc----CCCc-CCCccceE--EEEEEEEeCC---CCCceEEEE-C-----CCcEEEEEEcCCCEEEEEEEcCCCCC
Confidence 998764 6542 11112111 2222233321 122221111 1 23667889998888888776422111
Q ss_pred ---CCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHHHH
Q 013495 167 ---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 243 (442)
Q Consensus 167 ---~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG 243 (442)
....++.+..+.++.. +...+...+..... ..+.. ....+++..++++|+||||+.++|+.|+|++.||.++
T Consensus 230 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~--~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA 304 (500)
T 2qa1_A 230 QRRETPPSWHEVADAWKRL--TGDDIAHAEPVWVS--AFGNA-TRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDA 304 (500)
T ss_dssp -----CCCHHHHHHHHHHH--HSCCCTTSEEEEEE--EEECC-EEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHh--cCCCCCccceeEEE--EeccC-cEEccccccCCEEEEEccccCCCCccccchhhhHHHH
Confidence 1123444444444321 00111111211111 11111 1123566778999999999999999999999999999
Q ss_pred HHHHHHHHhhhcc---CchHHHHHHHHHH
Q 013495 244 MLAAEAGFGVLHE---DSNMEIYWDTLQK 269 (442)
Q Consensus 244 ~lAAeai~~al~~---~~~l~~Y~~~~~~ 269 (442)
..+|+.+...+.+ ...|..|++..+.
T Consensus 305 ~~La~~La~~~~g~~~~~~L~~Y~~eR~~ 333 (500)
T 2qa1_A 305 VNLGWKLGAVVNGTATEELLDSYHSERHA 333 (500)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 9999999888765 3568999998765
No 19
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.69 E-value=4.1e-16 Score=164.78 Aligned_cols=227 Identities=15% Similarity=0.105 Sum_probs=140.2
Q ss_pred CEEEehHHHHHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.|.++|..|++.|.++|++ .||+++.+ +|+++..+++|.+++|++.+ |.+++|++||+|||.+
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGAK 232 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 4899999999999999999 99999999 69999887667777888753 3469999999999999
Q ss_pred Ccc-cHHHHHhcCCcccccC---CCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEE
Q 013495 86 GSL-SEKLIKNFKLREKSHA---QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVV 161 (442)
Q Consensus 86 s~l-ar~l~~~~gl~~~~~~---~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~ 161 (442)
|.+ ++. +|+.. ... .+...++.+...+..+.....+. ...... ..|+.|++|..+ ...+|++.
T Consensus 233 S~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~g~~~~~pl~~-~~~~~~v~ 299 (526)
T 2pyx_A 233 SLLLGEH----LQVPF-LSQKSVLFNDRALAIQVPYSDANSPIASC-THSTAQ------PNGWIWDIGLPT-RKGVGYVY 299 (526)
T ss_dssp CCCCCCC----TCCCE-EECHHHHCCCEEEEEEEECSSTTCCCCSS-EEEEEE------TTEEEEEEECSS-EEEEEEEE
T ss_pred hHHHHHH----hCCCc-ccccccccCccEEEEEeeccCCCCCCCCc-eeEEec------CCCeEEEeeCCC-ceEEEEEe
Confidence 998 553 35531 000 11223444332221111111222 222211 236668888866 57777765
Q ss_pred ecCCCCCCCChHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHHHH
Q 013495 162 ALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMK 241 (442)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~ 241 (442)
..++..+ ....+.|..+... ..+.++..+. +.++.-. ...++...+|++||||||++++|+.|+|++.||.
T Consensus 300 ~~~~~~~-~~~~~~l~~~l~~--~~~~l~~~~~-----~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~ 370 (526)
T 2pyx_A 300 SSSHTND-IDAQKTLFNYLGV--DGAAADKLEP-----RQLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEW 370 (526)
T ss_dssp CTTTCCH-HHHHHHHHHHHTC--CHHHHHHCCC-----EEEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHH
T ss_pred cCCCCCh-HHHHHHHHHHHHh--cCcccccCCc-----eEEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHH
Confidence 4332110 0122333333211 0111211111 1111110 1134667899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcc-CchHHHHHHHHHHhh
Q 013495 242 SGMLAAEAGFGVLHE-DSNMEIYWDTLQKSW 271 (442)
Q Consensus 242 SG~lAAeai~~al~~-~~~l~~Y~~~~~~~~ 271 (442)
++..+|+++...... ...|..|++.++..|
T Consensus 371 da~~La~~L~~~~~~~~~~l~~Y~~~~~~~~ 401 (526)
T 2pyx_A 371 TASTLAQQLPPNRMVMDTISARVNERYQQHW 401 (526)
T ss_dssp HHHHHHHTCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCcCHHHHHHHHHHHHHHH
Confidence 999988877521111 356889999887754
No 20
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.64 E-value=2.5e-14 Score=145.96 Aligned_cols=232 Identities=15% Similarity=0.117 Sum_probs=141.7
Q ss_pred CEEEehHHHHHHHHHHHHH-CC-cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 7 GNRKSLSQLVRWLGGKAEE-LG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~-~G-vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
.+.++|..|++.|.+++++ .| ++|+.+++|+++.. +++ | .|.+.+. .+|+ ..+++|++||+|||.
T Consensus 101 ~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~~~---~~g~-------~~~~~ad~vV~AdG~ 167 (410)
T 3c96_A 101 QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGARD---GHGK-------PQALGADVLVGADGI 167 (410)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEEEE---TTSC-------EEEEEESEEEECCCT
T ss_pred eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEecC---CCCC-------ceEEecCEEEECCCc
Confidence 4789999999999999987 47 58999999999988 544 3 3444320 1121 157999999999999
Q ss_pred CCcccHHHHHhcCCcccccCCCceEE-E-EEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCC-----CeEEE
Q 013495 85 RGSLSEKLIKNFKLREKSHAQHQTYA-L-GIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMND-----RQIAL 157 (442)
Q Consensus 85 ~s~lar~l~~~~gl~~~~~~~~~~~~-~-g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~-----~~vsV 157 (442)
+|.+.+++ +.. .. ...|. . .++.....++ ..++.....+|.. ..+..|+||..+ +...+
T Consensus 168 ~S~vR~~l----~~~---~~-~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~g~~~~ 233 (410)
T 3c96_A 168 HSAVRAHL----HPD---QR-PLSHGGITMWRGVTEFDR--FLDGKTMIVANDE----HWSRLVAYPISARHAAEGKSLV 233 (410)
T ss_dssp TCHHHHHH----CTT---CC-CCEEEEEEEEEEEEEESC--CTTSSEEEEEECT----TCCEEEEEECCHHHHTTTCEEE
T ss_pred cchhHHHh----cCC---CC-CCCcCCeeEEEeeccccc--ccCCCeEEEecCC----CCcEEEEEecCCcccCCCCcEE
Confidence 99998865 322 11 11221 1 1122222222 2234444444431 235678898753 44555
Q ss_pred EEEEecCC--------CCC---CCChHHHHHHHHhCC----CcccccCCCe-EEeecceeeccCCCccCCccccCCEEEE
Q 013495 158 GLVVALNY--------HNP---FLNPYEEFQKFKHHP----AIKPLLEGGT-VVQYGARTLNEGGLQSIPYPVFPGGAII 221 (442)
Q Consensus 158 Glv~~~~~--------~~~---~~~~~~~~~~~~~~P----~i~~~l~~~~-~~~~ga~~i~~gg~~~~~~~~~~g~llv 221 (442)
.+++.... ... .....+.++.|.... .+..+++... ...+. +. ....+++++.++++||
T Consensus 234 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~--~~~~~~~~~~grv~Lv 308 (410)
T 3c96_A 234 NWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQYP---MV--DRDPLPHWGRGRITLL 308 (410)
T ss_dssp EEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEEEEE---EE--ECCCCSCCCBTTEEEC
T ss_pred EEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccceee---cc--cCCCccccccCCEEEE
Confidence 55443210 011 123344445554321 1223333322 22221 11 1112456778999999
Q ss_pred ccCCCcccCcccccHHHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHh
Q 013495 222 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 270 (442)
Q Consensus 222 GDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~~ 270 (442)
||||+.++|+.|+|++.||.++..+|+.+...-.....|..|++.++..
T Consensus 309 GDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~L~~Ye~~r~~~ 357 (410)
T 3c96_A 309 GDAAHLMYPMGANGASQAILDGIELAAALARNADVAAALREYEEARRPT 357 (410)
T ss_dssp THHHHCCCSSTTCTHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred ecccCCCCCccchhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976311146789999888764
No 21
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.63 E-value=3.2e-14 Score=153.86 Aligned_cols=251 Identities=12% Similarity=0.071 Sum_probs=148.4
Q ss_pred CEEEehHHHHHHHHHHHHHCCc--EEecCCeEeEEEEcCC--CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEecc
Q 013495 7 GNRKSLSQLVRWLGGKAEELGV--EIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAE 82 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gv--ei~~g~~v~~i~~~~~--g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~Ad 82 (442)
.+.++|..|.+.|.+.|++.|+ +|+.+++|+++..+++ +..+.|++.+.+...+|+ ..+++|++||+||
T Consensus 135 ~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~-------~~~i~a~~vVgAD 207 (639)
T 2dkh_A 135 HVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQ-------IETVQARYVVGCD 207 (639)
T ss_dssp EEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTC-------EEEEEEEEEEECC
T ss_pred eEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCC-------eEEEEeCEEEECC
Confidence 3689999999999999999998 9999999999998763 233456544210001231 2589999999999
Q ss_pred CCCCcccHHHHHhcCCcccccCCCceEEEEEEEEE-eeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCC-eEEEEEE
Q 013495 83 GCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDR-QIALGLV 160 (442)
Q Consensus 83 G~~s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~-~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~-~vsVGlv 160 (442)
|.+|.+.+++ |+..........+ ++-.+. ..+.........++. + .|..|++|.+++ .+++.+.
T Consensus 208 G~~S~vR~~l----g~~~~g~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~---~-----~g~~~~~P~~~~~~~r~~~~ 273 (639)
T 2dkh_A 208 GARSNVRRAI----GRQLVGDSANQAW--GVMDVLAVTDFPDVRYKVAIQS---E-----QGNVLIIPREGGHLVRFYVE 273 (639)
T ss_dssp CTTCHHHHHT----TCCCEECSCSCCE--EEEEEEEEECCTTTTSEEEEEE---T-----TEEEEEEECTTSSCEEEEEE
T ss_pred CcchHHHHHh----CCCCCCCCccceE--EEEEEEEccCCCccceeEEEEc---C-----CceEEEEEcCCCcEEEEEEE
Confidence 9999997765 6542011112222 222211 111111111111221 1 366788999877 7777765
Q ss_pred Eec--CC---CCCCCChHHHHHHHHh--CCCcccccCCCeEEeecceeeccCCCccCCccc------------cCCEEEE
Q 013495 161 VAL--NY---HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV------------FPGGAII 221 (442)
Q Consensus 161 ~~~--~~---~~~~~~~~~~~~~~~~--~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~------------~~g~llv 221 (442)
... +. .....++.+..+.++. .|..-. + +.+.+-. ..+.+ ....+++. .++++|+
T Consensus 274 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~---~~~~~~~-~~~~~-~~~a~~~~~~~~~~~~~~~~~gRV~L~ 347 (639)
T 2dkh_A 274 MDKLDADERVASRNITVEQLIATAQRVLHPYKLE-V---KNVPWWS-VYEIG-QRICAKYDDVVDAVATPDSPLPRVFIA 347 (639)
T ss_dssp CC-----------CCCHHHHHHHHHHHHTTSCEE-E---EEEEEEE-EECCC-CEECSCSBSCCCSSCCTTSCCCCEEEC
T ss_pred CCCcCcccccccCCCCHHHHHHHHHHHhCcccCc-c---eeeeEEE-ecccc-cchhhhhhccccccccccCccCcEEEE
Confidence 432 11 1122344444444421 221101 1 1111110 11111 01112333 7899999
Q ss_pred ccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc---CchHHHHHHHHHHhhhHHH-HHHHHchhhhh
Q 013495 222 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQE-LQRARNYRPAF 286 (442)
Q Consensus 222 GDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~~~~~~e-l~~~r~~~~~~ 286 (442)
||||+.++|+.|+|++.||.++..+|..+...+.+ ...|..|++..+.. .++ +...+.+..+|
T Consensus 348 GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR~~~--a~~~~~~s~~~~~~~ 414 (639)
T 2dkh_A 348 GDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQVV--AQQLIDFDREWAKMF 414 (639)
T ss_dssp GGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHHHHH--HHHHHHHHHHSCC--
T ss_pred ecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999887765 46799999988763 343 33445555555
No 22
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.62 E-value=7.3e-14 Score=151.78 Aligned_cols=261 Identities=11% Similarity=0.071 Sum_probs=152.0
Q ss_pred CEEEehHHHHHHHHHHHHHCC---cEEecCCeEeEEEEcC------CCcEEEEEeCCcc-----------ccCCCCCccC
Q 013495 7 GNRKSLSQLVRWLGGKAEELG---VEIYPGFAASEILYDA------DNKVIGIGTNDMG-----------IAKDGSKKEN 66 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~G---vei~~g~~v~~i~~~~------~g~v~gV~t~~~g-----------~~~~G~~~~~ 66 (442)
.+.++|..|.++|.+.+++.| ++|..+++|+++..++ ++..+.|++.+.. ...+|-...+
T Consensus 113 ~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (665)
T 1pn0_A 113 QVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSN 192 (665)
T ss_dssp CEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCH
T ss_pred eEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccc
Confidence 467999999999999999988 9999999999998875 1222445443210 0000000000
Q ss_pred C----------------CCc--eEEEEcEEEeccCCCCcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCc
Q 013495 67 F----------------QRG--VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGE 128 (442)
Q Consensus 67 ~----------------~~g--~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~ 128 (442)
+ ..| .+++|++||+|||++|.+.+++ |+.. .........++-.+............
T Consensus 193 l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l----g~~~--~g~~~~~~~~v~d~~~~~~~p~~~~~ 266 (665)
T 1pn0_A 193 LQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL----GFEM--IGEQTDYIWGVLDAVPASNFPDIRSR 266 (665)
T ss_dssp HHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH----TCCC--EEEEEEEEEEEEEEEEECCCTTTTSE
T ss_pred ccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc----CCCC--CCCCccEEEEEEEEEECCCCCCcceE
Confidence 0 012 5799999999999999998875 6641 11111111232222111100000111
Q ss_pred EEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecCC------CCCCCChHHHHHHHHh--CCCcccccCCCeEEeecce
Q 013495 129 ILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY------HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGAR 200 (442)
Q Consensus 129 ~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~~------~~~~~~~~~~~~~~~~--~P~i~~~l~~~~~~~~ga~ 200 (442)
..... . ..|..|++|.+++.+++.+...... .....++.+..+.++. .|..-. + +.+.+-.
T Consensus 267 ~~~~~-~-----~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~-~---~~~~~~~- 335 (665)
T 1pn0_A 267 CAIHS-A-----ESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFD-V---QQLDWFT- 335 (665)
T ss_dssp EEEEC-S-----SSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCCE-E---EEEEEEE-
T ss_pred EEEEe-C-----CCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccCc-e---eeEEEEE-
Confidence 11111 1 2366788999888888877654422 1122455555454431 232111 1 1111110
Q ss_pred eeccCCCccCCccc-cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc---CchHHHHHHHHHHhhhHHH-
Q 013495 201 TLNEGGLQSIPYPV-FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQE- 275 (442)
Q Consensus 201 ~i~~gg~~~~~~~~-~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~~~~~~e- 275 (442)
..+.+ ....+++. .++++|+||||+.+.|+.|+|++.||..+..+|..+...+++ ...|..|++..+.. .+.
T Consensus 336 ~~~~~-~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~--a~~~ 412 (665)
T 1pn0_A 336 AYHIG-QRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPF--AQAL 412 (665)
T ss_dssp EEEEE-EEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHH--HHHH
T ss_pred eeecc-ceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH--HHHH
Confidence 11111 11234566 699999999999999999999999999999999999887765 46799999988763 333
Q ss_pred HHHHHchhhhhh
Q 013495 276 LQRARNYRPAFE 287 (442)
Q Consensus 276 l~~~r~~~~~~~ 287 (442)
+...+.+..+|.
T Consensus 413 i~~s~~~~~l~~ 424 (665)
T 1pn0_A 413 IDFDHQFSRLFS 424 (665)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 344455555553
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.52 E-value=6.3e-14 Score=141.66 Aligned_cols=229 Identities=13% Similarity=-0.079 Sum_probs=133.8
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.++|..|++.|.+++++.|++|+.+++|+++... .+++|++||+|||.+|
T Consensus 92 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------------------------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 92 LCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------------------------PLADYDLVVLANGVNH 143 (381)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------------------------CGGGCSEEEECCGGGG
T ss_pred eeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------------------------ccccCCEEEECCCCCc
Confidence 478999999999999999999999999988776311 0145899999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEE--EEEcCCCeEEEEEEEecC
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSF--LYHMNDRQIALGLVVALN 164 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggw--iy~~~~~~vsVGlv~~~~ 164 (442)
. .+++...++.+ ...+ .+...+..+.... +..... +... ..|..| +||.+++...+.+....+
T Consensus 144 ~-R~~l~~~~g~~------~~~~-~~~~~~~~~~~~~--~~~~~~-~~~~----~~g~~~~~~~p~~~~~~~~~~~~~~~ 208 (381)
T 3c4a_A 144 K-TAHFTEALVPQ------VDYG-RNKYIWYGTSQLF--DQMNLV-FRTH----GKDIFIAHAYKYSDTMSTFIVECSEE 208 (381)
T ss_dssp G-TCCSSGGGCCC------CEEE-EEEEEEEEESSCC--SSEEEE-EEEE----TTEEEEEEEEECSSSCEEEEEEECHH
T ss_pred h-HHhhhhhcCCC------cccC-CccEEEEecCCCC--Ccceee-EeeC----CCcEEEEEEEEecCCeEEEEEECCcc
Confidence 8 66543333433 1111 1111112222211 111111 1110 124333 488877776655544221
Q ss_pred -C---CCCCCChHH---HHH-HHHh-CCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCccccc
Q 013495 165 -Y---HNPFLNPYE---EFQ-KFKH-HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKG 235 (442)
Q Consensus 165 -~---~~~~~~~~~---~~~-~~~~-~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~G 235 (442)
+ .-+..+..+ .++ .|.. .|.+ +++.... +.+ +.......++.+.++++||||||+.++|+.|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~-~~~-----~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG 281 (381)
T 3c4a_A 209 TYARARLGEMSEEASAEYVAKVFQAELGGH-GLVSQPG-LGW-----RNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHG 281 (381)
T ss_dssp HHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBCCTT-TCS-----EEEEECCCSCSEETTEEECGGGTCCCCGGGCCH
T ss_pred ccccCCcccCChHHHHHHHHHHhcccCCCc-hhhcCCC-cce-----eeeccccCCCcccCCEEEEEccccccCCCcccc
Confidence 0 012223322 222 2221 1222 3332211 001 000011235677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHhhhHHHHHHHHchhhhh
Q 013495 236 THTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAF 286 (442)
Q Consensus 236 I~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~~~~~~el~~~r~~~~~~ 286 (442)
+..||.+|..+|+++.+.-.....|+.|++..+.. ..+-+..++.+...|
T Consensus 282 ~~~al~Da~~La~~L~~~~~~~~aL~~Y~~~r~~~-~~~~~~~s~~~~~~~ 331 (381)
T 3c4a_A 282 TTMAVVVAQLLVKALCTEDGVPAALKRFEERALPL-VQLFRGHADNSRVWF 331 (381)
T ss_dssp HHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 99999999999999976411146789999988765 344455555555444
No 24
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.52 E-value=3.1e-13 Score=137.26 Aligned_cols=223 Identities=12% Similarity=0.049 Sum_probs=134.1
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+...++|..|.++|.+.+++ ++|+.+++|+++..++++ +.|++.+ |.+++|++||+|||.+
T Consensus 121 ~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~--v~v~~~~---------------g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 121 DNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKK--WTLTFEN---------------KPSETADLVILANGGM 181 (398)
T ss_dssp SCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSS--EEEEETT---------------SCCEEESEEEECSCTT
T ss_pred CCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCE--EEEEECC---------------CcEEecCEEEECCCcc
Confidence 34679999999999988754 789999999999987643 3466653 3579999999999999
Q ss_pred CcccHHHHHhcCCcccccCCCceEEE-EEEEEEeeCCCC---------CCCCcEEEEecCCCCCCCCceEEEEEcCCCeE
Q 013495 86 GSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGK---------HNPGEILHTLGWPLDQKTYGGSFLYHMNDRQI 155 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~~~~~~~~-g~ke~~~~~~~~---------~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~v 155 (442)
|.+.+++ +.. .+...+. ++... ++... ...+. .+.++ | ..+.++++.+++.+
T Consensus 182 S~vR~~l----~~~-----~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~g~-~~~~~-~-----~~~~~~~p~~~~~~ 243 (398)
T 2xdo_A 182 SKVRKFV----TDT-----EVEETGTFNIQAD--IHQPEINCPGFFQLCNGNR-LMASH-Q-----GNLLFANPNNNGAL 243 (398)
T ss_dssp CSCCTTT----CCC-----CCEEEEEEEEEEE--ESSHHHHSHHHHHHHTTSE-EEEEE-T-----TEEEEEEEEETTEE
T ss_pred hhHHhhc----cCC-----CceEcceEEEEEE--eCchhccCchhHhhcCCce-EEEec-C-----CCeEEEEeCCCCcE
Confidence 9998854 321 1222122 22211 22100 01222 22222 1 12345567778788
Q ss_pred EEEEEEecC--CCC----CCCChHHHHHHHHh-----CCCcccccCC-CeEEeecceeeccCCCccCCccc-cC--CEEE
Q 013495 156 ALGLVVALN--YHN----PFLNPYEEFQKFKH-----HPAIKPLLEG-GTVVQYGARTLNEGGLQSIPYPV-FP--GGAI 220 (442)
Q Consensus 156 sVGlv~~~~--~~~----~~~~~~~~~~~~~~-----~P~i~~~l~~-~~~~~~ga~~i~~gg~~~~~~~~-~~--g~ll 220 (442)
++++..... ... +..++.+..+.+.+ +|.+.+++.. .....+....++.. ++.. .+ +++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~rv~L 318 (398)
T 2xdo_A 244 HFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLE-----KPWKSKRPLPITM 318 (398)
T ss_dssp EEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCCC-----SCCCSCCSSCEEE
T ss_pred EEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccCC-----CCcccCCCccEEE
Confidence 888765432 111 11234333333321 1223333321 11222222222221 1222 34 8999
Q ss_pred EccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc--CchHHHHHHHHHHh
Q 013495 221 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE--DSNMEIYWDTLQKS 270 (442)
Q Consensus 221 vGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~--~~~l~~Y~~~~~~~ 270 (442)
|||||+.++|+.|+|++.||.++..+|+.+.+.-.. ...|+.|++.++..
T Consensus 319 iGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~ 370 (398)
T 2xdo_A 319 IGDAAHLMPPFAGQGVNSGLVDALILSDNLADGKFNSIEEAVKNYEQQMFIY 370 (398)
T ss_dssp CTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHH
T ss_pred EeehhccCCCccCccHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999764111 35688999887653
No 25
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.49 E-value=1.2e-12 Score=131.79 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=127.7
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.|+|..|.+.|.+. .+.+|+.+++|+++..++++. +.|.+.| |.+++|++||+|||.+|
T Consensus 106 ~~~i~R~~L~~~L~~~---~~~~v~~~~~v~~~~~~~~~~-v~v~~~d---------------G~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 106 RLSISRTELKEILNKG---LANTIQWNKTFVRYEHIENGG-IKIFFAD---------------GSHENVDVLVGADGSNS 166 (412)
T ss_dssp EEEEEHHHHHHHHHTT---CTTTEECSCCEEEEEECTTSC-EEEEETT---------------SCEEEESEEEECCCTTC
T ss_pred ceEeeHHHHHHHHHhh---ccceEEEEEEEEeeeEcCCCe-EEEEECC---------------CCEEEeeEEEECCCCCc
Confidence 4679999999999764 466799999999998877665 4566654 56899999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEE-EEEEEEeeCC-------CCCCCCcEEEEecCCCCCCCCceEEEE----E-----
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDE-------GKHNPGEILHTLGWPLDQKTYGGSFLY----H----- 149 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~-g~ke~~~~~~-------~~~~~g~~~~~~G~pl~~~~~Gggwiy----~----- 149 (442)
.+.+++ +.. ..+..+.. .+.....+.+ .....+.....+ |. .++..|+. +
T Consensus 167 ~vR~~l----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~ 233 (412)
T 4hb9_A 167 KVRKQY----LPF----IERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIV--PK---SPDWLFISMWRAPVNIHV 233 (412)
T ss_dssp HHHHHH----STT----CCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEEC--CS---SSEEEEEEEEEEESCTTS
T ss_pred chHHHh----CCC----ccccccceeEEEEEEecchhhhcchhhhhccCCcceEe--ec---CCCcceeeeeecCCceeE
Confidence 998876 322 11222211 1111112111 111111111111 11 11111110 1
Q ss_pred ---cC--CCeEEEEEEEecC-CCCC--CCChHHHHHHHH-----hCCCcccccCCCe---EEeecceeeccCCCccCCcc
Q 013495 150 ---MN--DRQIALGLVVALN-YHNP--FLNPYEEFQKFK-----HHPAIKPLLEGGT---VVQYGARTLNEGGLQSIPYP 213 (442)
Q Consensus 150 ---~~--~~~vsVGlv~~~~-~~~~--~~~~~~~~~~~~-----~~P~i~~~l~~~~---~~~~ga~~i~~gg~~~~~~~ 213 (442)
.. ++.+...+....+ .... ..++....+.++ -+|.+..+++... ...+..+.. ..+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~-----~~~~~~ 308 (412)
T 4hb9_A 234 EASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSM-----PHLLPW 308 (412)
T ss_dssp CGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEEC-----CCCCCC
T ss_pred EEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccc-----cccccc
Confidence 00 1111111111111 1111 122322222222 1344444433221 111111111 123456
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc----CchHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKS 270 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~~ 270 (442)
..++++||||||+.++|+.|+|++.||.++..+|+.+...+.+ ..+|..|++..+..
T Consensus 309 ~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~~~ 369 (412)
T 4hb9_A 309 KSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMRAY 369 (412)
T ss_dssp CCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred cccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence 7799999999999999999999999999999999999988765 34689999877653
No 26
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.47 E-value=4.1e-12 Score=134.95 Aligned_cols=224 Identities=12% Similarity=0.023 Sum_probs=137.5
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.++|..|++.|.+.|++. |+.+++|+++..++++ | .|++.+. .+|+ ..+++|++||+|||.+|
T Consensus 132 ~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~---~~G~-------~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 132 DAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDL---RTGA-------TRAVHARYLVACDGASS 196 (549)
T ss_dssp CEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEET---TTCC-------EEEEEEEEEEECCCTTC
T ss_pred ccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEEC---CCCC-------EEEEEeCEEEECCCCCc
Confidence 58899999999999999988 9999999999988754 3 3444320 1231 25799999999999999
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCC----CCCCCcEEEEecCCCCCCCCceEEEEEcCC-CeEEEEEEE
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG----KHNPGEILHTLGWPLDQKTYGGSFLYHMND-RQIALGLVV 161 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~----~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~-~~vsVGlv~ 161 (442)
.+.+++ |+.. .........+ ...+..+.- ...+.. .+++..| ..+..|++|.++ +...+.+
T Consensus 197 ~vR~~l----g~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~p----~~~~~~~~p~~~~~~~~~~~-- 262 (549)
T 2r0c_A 197 PTRKAL----GIDA-PPRHRTQVFR--NILFRAPELRSLLGERAAL-FFFLMLS----SSLRFPLRALDGRGLYRLTV-- 262 (549)
T ss_dssp HHHHHH----TCCC-CBSSCCEEEE--EEEEECTTHHHHHGGGCCS-EEEEEEE----TTEEEEEEESSSSSEEEEEE--
T ss_pred HHHHHc----CCCC-CCCcccceEE--EEEEECCchHHhcCCCCce-EEEEECC----CCcEEEEEEECCCcEEEEEe--
Confidence 998865 6642 1111222222 222333310 001222 2222111 003457888864 3444443
Q ss_pred ecCCCCCCCC---hHHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHH
Q 013495 162 ALNYHNPFLN---PYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 238 (442)
Q Consensus 162 ~~~~~~~~~~---~~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~ 238 (442)
..+.. + .+ ..+.++++... .+. .+.+....-.+. ....+++..++++|+||||+.++|+.|+|++.
T Consensus 263 ~~~~~-~-~~~~~~~~~l~~~~~~-~~~-----~~~~~~~~~~~~---~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~ 331 (549)
T 2r0c_A 263 GVDDA-S-KSTMDSFELVRRAVAF-DTE-----IEVLSDSEWHLT---HRVADSFSAGRVFLTGDAAHTLSPSGGFGMNT 331 (549)
T ss_dssp ECSTT-C-CSCCCHHHHHHHHBCS-CCC-----CEEEEEEEEEEC---CEECSCSEETTEEECGGGTEECCCGGGHHHHH
T ss_pred cCCCC-C-CCHHHHHHHHHHHhCC-CCc-----eeEEEEecchhH---hhhHHhhcCCcEEEEccccccCCCccCCcccc
Confidence 22211 1 22 23334333211 111 123221111111 12245677899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc---CchHHHHHHHHHHh
Q 013495 239 AMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKS 270 (442)
Q Consensus 239 Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~~ 270 (442)
||.++..+|+.+...+.+ ...|..|++..+..
T Consensus 332 gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~ 366 (549)
T 2r0c_A 332 GIGSAADLGWKLAATLRGWAGPGLLATYEEERRPV 366 (549)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 999999999999888765 46799999988763
No 27
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.46 E-value=3.3e-12 Score=129.58 Aligned_cols=218 Identities=13% Similarity=0.053 Sum_probs=125.4
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.++|..|.+.|.+.+ .|++|+.+++|+++..++++ +.|++.+ |.+++|++||+|||.+|.+
T Consensus 95 ~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~--v~v~~~~---------------g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 95 FTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSET--VQMRFSD---------------GTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC--EEEEETT---------------SCEEEESEEEECCCTTCHH
T ss_pred ccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE--EEEEECC---------------CCEEECCEEEECCCcchhH
Confidence 578899999998876 69999999999999987644 3466653 4579999999999999999
Q ss_pred cHHHHHhcCCcccccCCCceEE-EEEEEEEeeCCCCCCC-------CcEEEEecCCCCCCCCceEEEEEcCCC------e
Q 013495 89 SEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDEGKHNP-------GEILHTLGWPLDQKTYGGSFLYHMNDR------Q 154 (442)
Q Consensus 89 ar~l~~~~gl~~~~~~~~~~~~-~g~ke~~~~~~~~~~~-------g~~~~~~G~pl~~~~~Gggwiy~~~~~------~ 154 (442)
.+++ + . . .+...+ ..+... ++.....+ .....+.+ + .+...+|+.+++ .
T Consensus 156 r~~~----~-~--~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~g~~~~~ 218 (397)
T 2vou_A 156 RKRL----L-G--I--EPTYAGYVTWRGV--LQPGEVADDVWNYFNDKFTYGLL-D-----DGHLIAYPIPGRENAESPR 218 (397)
T ss_dssp HHHH----H-C--C--CCEEEEEEEEEEE--ECTTSSCHHHHHHHTTEEEEEEE-T-----TEEEEEEEECCSSTTSCCE
T ss_pred HHHh----c-c--C--CCCccceEEEEEE--eeccccChhhhhhhcCceeEEec-C-----CCEEEEEECCCCCCcccee
Confidence 8876 2 2 1 121111 112211 22211111 11111111 1 122234555432 3
Q ss_pred EEEEEEEecCC--------CCC------------CCChHHHH----HHHHh--CCCcccccCCC-eEEeecceeeccCCC
Q 013495 155 IALGLVVALNY--------HNP------------FLNPYEEF----QKFKH--HPAIKPLLEGG-TVVQYGARTLNEGGL 207 (442)
Q Consensus 155 vsVGlv~~~~~--------~~~------------~~~~~~~~----~~~~~--~P~i~~~l~~~-~~~~~ga~~i~~gg~ 207 (442)
+++.+...... ... ..+ .+.+ +.+.. +| +.++++.. .... .+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~ 291 (397)
T 2vou_A 219 LNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLN-PHNLRQFHSKGESLFKP-FRDLVLNASSPFV-----TVVADA 291 (397)
T ss_dssp EEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCC-HHHHHHHHHHHTTSCHH-HHHHHHHCSSCEE-----EEEEEB
T ss_pred EEEEEEecCCCccchhhhccCCCCcccccccCcccCC-HHHHHHHHHHHHhhChH-HHHHHhccCCcce-----eeeeee
Confidence 44443332210 000 001 1222 22211 12 33333211 1111 111111
Q ss_pred ccCCccccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhccCchHHHHHHHHHHh
Q 013495 208 QSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 270 (442)
Q Consensus 208 ~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~~ 270 (442)
..++++.++++||||||+.++|+.|+|++.||.++..+|+++...-.-...|..|++..+..
T Consensus 292 -~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~L~~Ye~~R~~~ 353 (397)
T 2vou_A 292 -TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKNHDLRGSLQSWETRQLQQ 353 (397)
T ss_dssp -CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred -cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 23567889999999999999999999999999999999998864211135688999876653
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.91 E-value=1.7e-08 Score=103.66 Aligned_cols=220 Identities=12% Similarity=0.057 Sum_probs=120.3
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCe-EeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFA-ASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~-v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
++.+++..|+.+|.+++++.|++++.... +.++ . ....++++||+|||.+
T Consensus 116 ~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l-----------~------------------~~~~~ad~VV~AdG~~ 166 (430)
T 3ihm_A 116 SRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDL-----------E------------------GLSEQYDLLVVCTGKY 166 (430)
T ss_dssp EBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGH-----------H------------------HHHTTSSEEEECCCCT
T ss_pred ceeecHHHHHHHHHHHHHHcCCEEEEEecchhhh-----------h------------------hhcccCCEEEECCCCc
Confidence 47899999999999999999999886320 1110 0 0112479999999999
Q ss_pred CcccHHHHHhcCCccc--ccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEc--CCCeEEEEEEE
Q 013495 86 GSLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHM--NDRQIALGLVV 161 (442)
Q Consensus 86 s~lar~l~~~~gl~~~--~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~--~~~~vsVGlv~ 161 (442)
|.+.. ++.... ....++. .+.+..+..+.... ..+...+.. | ..|..|++|. .++..++.++.
T Consensus 167 S~~~~-----~~~~~~~~~~~~p~r-~~~~~~~~g~~~~~-~~~~~~~~~--~----~~G~~~~~p~~~~~g~~~~~~~~ 233 (430)
T 3ihm_A 167 ALGKV-----FEKQSENSPFEKPQR-ALCVGLFKGIKEAP-IRAVTMSFS--P----GHGELIEIPTLSFNGMSTALVLE 233 (430)
T ss_dssp TGGGG-----SCBCGGGCCCSSCSS-EEEEEEEESBCCCS-SCCEEEEEE--T----TTEEEEEEEEEETTEEEEEEEEE
T ss_pred chHHh-----ccCCCCCCcccCCCe-eEEEEEEccCCCCC-cCeeeeeec--C----CCcceEEecccCCCcceEEEEEE
Confidence 87642 232210 0112222 22221122222211 112222222 1 2355577774 34456666654
Q ss_pred ecC------CCCCC--CChHHH----HHHHH-hCCCcccccCCCeEEeec-ceeeccCCC-----ccCCccccCCEEE-E
Q 013495 162 ALN------YHNPF--LNPYEE----FQKFK-HHPAIKPLLEGGTVVQYG-ARTLNEGGL-----QSIPYPVFPGGAI-I 221 (442)
Q Consensus 162 ~~~------~~~~~--~~~~~~----~~~~~-~~P~i~~~l~~~~~~~~g-a~~i~~gg~-----~~~~~~~~~g~ll-v 221 (442)
... +.... .++.+. .+.|. .+|.+..++...+..... ...+..+.+ ..+++.+.++++| +
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 313 (430)
T 3ihm_A 234 NHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGL 313 (430)
T ss_dssp ECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEEC
T ss_pred ecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCEEEEe
Confidence 322 11110 134322 23333 356665655544311100 000001111 1133556677777 9
Q ss_pred ccCCCcccCcccccHHHHHHHHHHHHHHHHhhhccCchHHHHHHHHH
Q 013495 222 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQ 268 (442)
Q Consensus 222 GDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~ 268 (442)
||||+.++|+.|+|++.||.++..+|+.+.+.-.-...|..|+...+
T Consensus 314 GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~~~~~~~~~~~~~r~ 360 (430)
T 3ihm_A 314 GDIQATVDPVLGQGANMASYAAWILGEEILAHSVYDLRFSEHLERRR 360 (430)
T ss_dssp GGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCSCCSHHHHHHHHHHH
T ss_pred cCccccCCCchhhhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999875322567888865543
No 29
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=98.88 E-value=3.6e-10 Score=88.25 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=53.7
Q ss_pred CCeEecCCCCCcccCCCCCccccccccccceEEEecCCCC-ceeE--EEecCCCccCCcccccCCCCCeeEECcCCCCC
Q 013495 361 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKN-QLKL--QINAQNCLHCKACDIKDPKQNIKWTVPEGGGG 436 (442)
Q Consensus 361 ~Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~-~~~~--~i~~~~Ci~Cg~C~~~cp~~~I~w~~p~gg~G 436 (442)
.|+.+ |.+.|+.| +.|+.+||.+++++.+.+.. ...+ .++.+.|+.||.|..+||++||+|+...++.-
T Consensus 1 ~~~~~-~~~~C~~C------g~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~ 72 (80)
T 1jb0_C 1 AHTVK-IYDTCIGC------TQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAET 72 (80)
T ss_dssp CCEEE-EETTCCCC------CHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEECCSCC
T ss_pred CCCcc-cCCcCcCh------hHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeeecchHH
Confidence 36666 67899998 78999999999988653111 1122 35678999999999999999999998877654
No 30
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=98.85 E-value=1.1e-09 Score=90.78 Aligned_cols=56 Identities=20% Similarity=0.294 Sum_probs=48.1
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEEC
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 430 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~ 430 (442)
.|.+.|++|.. +.|+.+||.+++++.++ .+.||.+.|++||.|..+||++||++..
T Consensus 3 ~~~~~C~~C~~----~~C~~~CP~~ai~~~~~-----~~~i~~~~C~~Cg~C~~~CP~~ai~~~~ 58 (106)
T 7fd1_A 3 VVTDNCIKCKY----TDCVEVCPVDCFYEGPN-----FLVIHPDECIDCALCEPECPAQAIFSED 58 (106)
T ss_dssp EECGGGTTTCC----CHHHHHCTTCCEEECSS-----CEEECTTTCCCCCTTGGGCTTCCEEEGG
T ss_pred ECccccCCccC----cHHHHHcCccceEcCCC-----cEEECcccCCChhhhHHhCCChhhhccc
Confidence 36789999821 28999999999988654 6889999999999999999999999863
No 31
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=98.81 E-value=1.8e-09 Score=85.18 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=48.0
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC------cccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg------~C~~~cp~~~I~w~ 429 (442)
.|.+.|++| +.|+.+||.+++++.++ .+.+|.+.|+.|| .|..+||++||++.
T Consensus 3 ~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (82)
T 3eun_A 3 MITDECINC------DVCEPECPNGAISQGDE-----TYVIEPSLCTECVGHYETSQCVEVCPVDAIIKD 61 (82)
T ss_dssp EECTTCCCC------CTTGGGCTTCCEEECSS-----SEEECGGGCCTTTTTCSSCHHHHHCTTCCEEEC
T ss_pred EeCCCCcCc------cchHHHCChhheEcCCC-----ceEEchhhcCCCCCCCCccHHHHhCCccceEEc
Confidence 467999998 79999999999998654 6899999999999 99999999999986
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.81 E-value=4.7e-08 Score=97.60 Aligned_cols=194 Identities=17% Similarity=0.112 Sum_probs=115.9
Q ss_pred EEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 8 NRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..++..+|.+.|.+.+++.|++|+.+++|+++..++ +.+ +|++.+ + +++|+.||+|+|..+.
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~---------------g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPS---------------G-DVWANHVVVASGVWSG 220 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETT---------------E-EEEEEEEEECCGGGTH
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCC---------------c-eEEcCEEEECCChhHH
Confidence 467788999999999999999999999999998776 444 777753 4 7999999999999865
Q ss_pred ccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecCCCC
Q 013495 88 LSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHN 167 (442)
Q Consensus 88 lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~~~~ 167 (442)
.+.+.+++.. ...+ .-|.--..+.+... ...++ + ..+.|++|..++.+.||.....+..+
T Consensus 221 ---~l~~~~~~~~--~~~~---~~g~~~~~~~~~~~--~~~~~-~---------~~~~~~~p~~~g~~~vG~~~~~~~~~ 280 (382)
T 1ryi_A 221 ---MFFKQLGLNN--AFLP---VKGECLSVWNDDIP--LTKTL-Y---------HDHCYIVPRKSGRLVVGATMKPGDWS 280 (382)
T ss_dssp ---HHHHHTTCCC--CCEE---EEEEEEEEECCSSC--CCSEE-E---------ETTEEEEECTTSEEEEECCCEETCCC
T ss_pred ---HHHHhcCCCC--ceec---cceEEEEECCCCCC--ccceE-E---------cCCEEEEEcCCCeEEEeecccccCCC
Confidence 2333445531 1111 11111112222111 11111 1 12468999888888888753322111
Q ss_pred CCCChH---HHHHHHH-hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCC---Cc--ccCcccccHHH
Q 013495 168 PFLNPY---EEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA---GF--LNVPKIKGTHT 238 (442)
Q Consensus 168 ~~~~~~---~~~~~~~-~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAA---g~--vdp~~g~GI~~ 238 (442)
...++. ..++.+. ..|.+. +.+.+..-+ |+. ....++..++|++. ++ ..++++.|+.+
T Consensus 281 ~~~~~~~~~~l~~~~~~~~p~l~----~~~~~~~w~------g~~---~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~ 347 (382)
T 1ryi_A 281 ETPDLGGLESVMKKAKTMLPAIQ----NMKVDRFWA------GLR---PGTKDGKPYIGRHPEDSRILFAAGHFRNGILL 347 (382)
T ss_dssp CSCCHHHHHHHHHHHHHHCGGGG----GSEEEEEEE------EEE---EECSSSCCEEEEETTEEEEEEEECCSSCTTTT
T ss_pred CCCCHHHHHHHHHHHHHhCCCcC----CCceeeEEE------Eec---ccCCCCCcEeccCCCcCCEEEEEcCCcchHHH
Confidence 222221 2233332 234332 223222111 111 22346667788764 22 46788999999
Q ss_pred HHHHHHHHHHHHHh
Q 013495 239 AMKSGMLAAEAGFG 252 (442)
Q Consensus 239 Am~SG~lAAeai~~ 252 (442)
|..+|.++|+.|..
T Consensus 348 a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 348 APATGALISDLIMN 361 (382)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhC
Confidence 99999999998864
No 33
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=98.79 E-value=1.3e-09 Score=89.57 Aligned_cols=64 Identities=22% Similarity=0.375 Sum_probs=51.1
Q ss_pred CCeEecCCCCCcccCCCCCccccccccccceEEEecCCC----CceeEEEecCCCccCCcccccCCCCCeeEECc
Q 013495 361 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK----NQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 431 (442)
Q Consensus 361 ~Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~----~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~p 431 (442)
.++.+ |.+.|+.| +.|+.+||.+++++.+... ....+.++.+.|++||.|..+||++||+|+.|
T Consensus 36 ~~~~i-d~~~C~~C------g~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~~ 103 (103)
T 1xer_A 36 TIVGV-DFDLCIAD------GSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKPP 103 (103)
T ss_dssp SSEEE-ETTTCCCC------CHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCCHHHHHCTTCCEEECCC
T ss_pred ceEEE-ehhhCCCh------hhHHHHcCccCeecccccCccccccceeecCcccccChhhHHHhccccceEecCC
Confidence 34554 78999998 7999999999999865311 11235678899999999999999999999765
No 34
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=98.79 E-value=3.1e-09 Score=77.04 Aligned_cols=50 Identities=22% Similarity=0.335 Sum_probs=44.5
Q ss_pred CCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeE
Q 013495 368 PKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKW 428 (442)
Q Consensus 368 ~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w 428 (442)
.+.|++| +.|..+||.+++++.++ ++.+|.+.|++||.|..+||++||++
T Consensus 5 ~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 5 NEACISC------GACEPECPVNAISSGDD-----RYVIDADTCIDCGACAGVCPVDAPVQ 54 (55)
T ss_dssp CTTCCCC------CTTGGGCTTCCEECCSS-----SCEECTTTCCCCCHHHHTCTTCCEEE
T ss_pred cccCcCh------hhHHHHCCccccCcCCC-----EEEeccccCcChhChHHHccccceec
Confidence 5789998 78999999999987654 57799999999999999999999976
No 35
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=98.79 E-value=7.1e-09 Score=75.68 Aligned_cols=56 Identities=13% Similarity=0.080 Sum_probs=45.2
Q ss_pred CeEecCCCCCcccCCCCCccccccccccceEEE-ecCCCCceeEE--EecCCCccCCcccccCCCCCeeEE
Q 013495 362 HLRLRDPKIPELVNLPEYAGPESRYCPARVYEY-VPDEKNQLKLQ--INAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 362 Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~-~~~~~~~~~~~--i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
|+.+ |.+.|++| +.|+++|| .++++ .++ + +.. ++.+.|..|+.|..+||++||+|+
T Consensus 1 ~i~i-~~~~C~~C------~~C~~~Cp-~~~~~~~~~--~--~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 1 TIVI-DHEECIGC------ESCVELCP-EVFAMIDGE--E--KAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp CEEE-SSCCCSSC------CGGGGTST-TTEEEEECS--S--CEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred CeEE-ChhhCcCh------hHHHHHCC-HHheecCCC--C--cEEEecChhhhhHHHHHHHhCCHhhEEcC
Confidence 3444 78999998 78999999 58887 332 3 333 589999999999999999999874
No 36
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=98.77 E-value=3.2e-09 Score=82.56 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=47.3
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.|++.|++|. .+.|+++||.+++++.++ .+.+|.+.|++||.|..+||++||++.
T Consensus 3 i~~~~C~~c~----C~~C~~~Cp~~ai~~~~~-----~~~~~~~~C~~Cg~C~~~CP~~ai~~~ 57 (77)
T 1bc6_A 3 VITEPCIGTK----DASCVEVCPVDCIHEGED-----QYYIDPDVCIDCGACEAVCPVSAIYHE 57 (77)
T ss_dssp ECCSTTTTCC----CCSSTTTCTTCCEEECSS-----SEEECTTTCCSCCSHHHHSGGGSSEET
T ss_pred EeCccCCCCC----cchhHHhcccccEEeCCC-----cEEECcccCcCccCCHhhcCccceEec
Confidence 3678999941 179999999999988653 688999999999999999999999875
No 37
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=98.74 E-value=4.6e-09 Score=82.66 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=48.1
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC------cccccCCCCCeeEEC
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWTV 430 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg------~C~~~cp~~~I~w~~ 430 (442)
.|.+.|++| +.|+.+||.+++++.++ .+.+|.+.|+.|+ .|..+||++||++..
T Consensus 3 ~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 2fgo_A 3 KITDDCINC------DVCEPECPNGAISQGEE-----IYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD 62 (82)
T ss_dssp CCCTTCCCC------CTTGGGCTTCCEEECSS-----SEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCT
T ss_pred eeCCCCCCh------hhHHHHCChhccCCCCC-----eEEEEchhCccCCCcCCCCHhHhhCCcccEEccC
Confidence 477899998 68999999999998654 5889999999999 999999999998853
No 38
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=98.74 E-value=3e-09 Score=82.95 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=46.7
Q ss_pred CCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 367 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
|.+.|++|. .+.|+++||.+++++.++ .+.+|.+.|++||.|..+||++||+++
T Consensus 4 ~~~~C~~c~----C~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 57 (78)
T 1h98_A 4 ICEPCIGVK----DQSCVEVCPVECIYDGGD-----QFYIHPEECIDCGACVPACPVNAIYPE 57 (78)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----SEEECTTTCCCCCTHHHHCTTCCEEEG
T ss_pred EchhCCCCC----cChhhhhcCccceEcCCC-----EEEECcccCCcHhHHHHhCCccceEec
Confidence 578899832 179999999999998654 688999999999999999999999875
No 39
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=98.70 E-value=6.7e-09 Score=85.67 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=47.5
Q ss_pred CCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 367 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
|.+.|+.|. .+.|+.+||.+++.+.++ .+.+|.+.|+.||.|..+||++||++.
T Consensus 4 ~~~~C~~C~----c~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~Cg~C~~~CP~~Ai~~~ 57 (105)
T 2v2k_A 4 IAEPCVDVK----DKACIEECPVDCIYEGAR-----MLYIHPDECVDCGACEPVCPVEAIYYE 57 (105)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----CEEECTTTCCCCCCSGGGCTTCCEEEG
T ss_pred ecccCCCCC----cChhhhhcCccccCcCCC-----cEEEeCCcCcchhhHHHhCCccCEEec
Confidence 678899873 279999999999998654 588999999999999999999999886
No 40
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=98.69 E-value=5e-09 Score=82.05 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=47.3
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC------cccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg------~C~~~cp~~~I~w~ 429 (442)
.|.+.|++| +.|+.+||.+++++.++ .+.+|.+.|+.|+ .|..+||++||++.
T Consensus 3 ~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (80)
T 1rgv_A 3 YINDDCTAC------DACVEECPNEAITPGDP-----IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp CCCSCCCCC------CTTTTTCTTCCEECCSS-----SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred EeCCCCcCh------hhHHHHcChhccCcCCC-----eeEEcchhCcCCCCcCCccHHHHhcCcccEEec
Confidence 477899998 68999999999998654 5789999999999 99999999999875
No 41
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.67 E-value=6.7e-09 Score=93.30 Aligned_cols=61 Identities=16% Similarity=0.238 Sum_probs=48.9
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.|.+.|+.|..- -...|+.+||.+++++.++ +...+.+|.+.|+.||.|+.+||++||++.
T Consensus 4 id~~~C~gC~~c-~~~~C~~~CP~~ai~~~~~--~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 64 (166)
T 3gyx_B 4 VDPSKCDGCKGG-EKTACMYICPNDLMILDPE--EMKAFNQEPEACWECYSCIKICPQGAITAR 64 (166)
T ss_dssp ECTTTCCCCCSS-SCCHHHHHCTTSCEEEETT--TTEEEESCGGGCCCCCHHHHHCSSCCEEEC
T ss_pred EcchhcCCCCCC-CcchhHHhCCccccEEecC--CceeEecCcccCcccChHhHhCCccceEEe
Confidence 488999998100 0118999999999999765 333567899999999999999999999875
No 42
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=98.67 E-value=7.7e-09 Score=91.35 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=48.4
Q ss_pred cCCCCCcccCCCCCcc-----ccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAG-----PESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~-----~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.|.+.|++| + .|+++||.+++++.++ +.+.+.+|.+.|++||.|..+||++||++.
T Consensus 5 vd~~~C~~C------~~~~~~~C~~~CP~~ai~~~~~--~~~~~~id~~~C~~Cg~Cv~~CP~~AI~~~ 65 (150)
T 1jnr_B 5 VNPEKCDGC------KALERTACEYICPNDLMTLDKE--KMKAYNREPDMCWECYSCVKMCPQGAIDVR 65 (150)
T ss_dssp ECTTTCCSC------CSSSSCHHHHHCTTSCEEEETT--TTEEEESCGGGCCCCCHHHHHCTTCCEEEC
T ss_pred ECcccCCCC------CCcccccchhhcCccCeEEecC--CceeeeeCcccCcCHhHHHHhCCccceEec
Confidence 478999998 6 8999999999998765 223467999999999999999999999875
No 43
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=98.56 E-value=1.4e-08 Score=80.55 Aligned_cols=53 Identities=19% Similarity=0.221 Sum_probs=46.8
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC------cccccCCC-CCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPK-QNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg------~C~~~cp~-~~I~w~ 429 (442)
.|.+.|++| +.|+.+||.+++++.++ .+.+|.+.|+.|| .|..+||+ +||++.
T Consensus 3 ~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~ 62 (85)
T 2zvs_A 3 LITKKCINC------DMCEPECPNEAISMGDH-----IYEINSDKCTECVGHYETPTCQKVCPIPNTIVKD 62 (85)
T ss_dssp EECTTCCCC------CTTTTTCTTCCEECCSS-----SCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECT
T ss_pred EeCCcCcCh------hHHHHHCchhccCcCCC-----ceEEeChhccCCCCcCCccHhhHhCcCCCCEEec
Confidence 367899998 68999999999988654 5789999999999 99999999 999874
No 44
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.54 E-value=1.5e-06 Score=87.25 Aligned_cols=196 Identities=16% Similarity=0.139 Sum_probs=114.1
Q ss_pred EEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC-
Q 013495 8 NRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG- 86 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s- 86 (442)
..++-..+.+.|.+.+++.|++|+.+++|+++..++ +.+++|++.+ + +++|+.||+|+|..+
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTR---------------G-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------C-CEEEEEEEECCGGGHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCC---------------c-eEECCEEEECCchhHH
Confidence 345666899999999999999999999999999875 6788888763 3 699999999999986
Q ss_pred cccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec-CC
Q 013495 87 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NY 165 (442)
Q Consensus 87 ~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~-~~ 165 (442)
.+.+ .+|++. ...+. .+.-.+.+...... .. ++.. ..++.|+.|..++.+.||..... +.
T Consensus 232 ~l~~----~~g~~~--~~~~~---~~~~~~~~~~~~~~-~~-~~~~--------~~~~~y~~p~~~g~~~ig~~~~~~~~ 292 (405)
T 2gag_B 232 VLAE----MAGFEL--PIQSH---PLQALVSELFEPVH-PT-VVMS--------NHIHVYVSQAHKGELVMGAGIDSYNG 292 (405)
T ss_dssp HHHH----HHTCCC--CEEEE---EEEEEEEEEBCSCC-CS-EEEE--------TTTTEEEEECTTSEEEEEEEECSSCC
T ss_pred HHHH----HcCCCC--Ccccc---ceeEEEecCCcccc-Cc-eEEe--------CCCcEEEEEcCCCcEEEEeccCCCCc
Confidence 3433 346541 11111 11000111111111 11 2211 11345777877788888876542 11
Q ss_pred CCCCCCh--HH-HHHHHH-hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCC--Ccc--cCcccccHH
Q 013495 166 HNPFLNP--YE-EFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA--GFL--NVPKIKGTH 237 (442)
Q Consensus 166 ~~~~~~~--~~-~~~~~~-~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAA--g~v--dp~~g~GI~ 237 (442)
.....++ .+ .++.+. ..|.+. +.+.+..-+ |+. ....++..+||++. +++ ..+.+.|+.
T Consensus 293 ~~~~~~~~~~~~l~~~~~~~~p~l~----~~~~~~~w~------g~~---~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~ 359 (405)
T 2gag_B 293 YGQRGAFHVIQEQMAAAVELFPIFA----RAHVLRTWG------GIV---DTTMDASPIISKTPIQNLYVNCGWGTGGFK 359 (405)
T ss_dssp CSSCCCTHHHHHHHHHHHHHCGGGG----GCEECEEEE------EEE---EEETTSCCEEEECSSBTEEEEECCGGGCST
T ss_pred cccCCCHHHHHHHHHHHHHhCCccc----cCCcceEEe------ecc---ccCCCCCCEecccCCCCEEEEecCCCchhh
Confidence 1111221 12 222222 234332 223222101 111 23456777888864 432 346788999
Q ss_pred HHHHHHHHHHHHHHh
Q 013495 238 TAMKSGMLAAEAGFG 252 (442)
Q Consensus 238 ~Am~SG~lAAeai~~ 252 (442)
.|...|.++|+.|..
T Consensus 360 ~a~~~g~~la~~i~g 374 (405)
T 2gag_B 360 GTPGAGFTLAHTIAN 374 (405)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998874
No 45
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=98.51 E-value=3.6e-08 Score=89.02 Aligned_cols=57 Identities=21% Similarity=0.268 Sum_probs=47.0
Q ss_pred CCCCCcccCCCCCccccccccccceEEEecCCC-----------CceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 367 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-----------NQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~-----------~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
|.+.|+.| +.|+.+||.+++.+..+.. ....+.++.+.|+.||.|..+||++||.+.
T Consensus 49 d~~~Ci~C------~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 116 (182)
T 3i9v_9 49 GLEKCIGC------SLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLG 116 (182)
T ss_dssp SCBSCCCC------CHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEEC
T ss_pred CCccCccc------ccchhhCCcccEEeecccccccccccccccccceeecCCCcCcChhChhhhCCccceEec
Confidence 56899999 7899999999998764311 012467899999999999999999999886
No 46
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.46 E-value=4e-06 Score=83.60 Aligned_cols=199 Identities=15% Similarity=0.070 Sum_probs=110.0
Q ss_pred EEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 8 NRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..++...+.+.|.+.|++.|++|+.+++|+++..++ +.+++|++.+ | +++|+.||.|+|..|.
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~---------------g-~i~a~~VV~A~G~~s~ 206 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNK---------------G-IIKTGIVVNATNAWAN 206 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------E-EEECSEEEECCGGGHH
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC-CEEEEEEECC---------------c-EEECCEEEECcchhHH
Confidence 457888999999999999999999999999999876 6777888763 4 7999999999999863
Q ss_pred ccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCC-cEEEEecCCCCCCCCceEEEEEcCCCeEEEEEE-Ee-cC
Q 013495 88 LSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPG-EILHTLGWPLDQKTYGGSFLYHMNDRQIALGLV-VA-LN 164 (442)
Q Consensus 88 lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g-~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv-~~-~~ 164 (442)
.|.+.+|+. ...+-.-.-|. +..+.+...... ..+... ...+.|+.|..++ +-||.. .. .+
T Consensus 207 ---~l~~~~g~~---~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~-------~~~~~y~~p~~~g-~~iG~~~~~~~~ 270 (382)
T 1y56_B 207 ---LINAMAGIK---TKIPIEPYKHQ--AVITQPIKRGTINPMVISF-------KYGHAYLTQTFHG-GIIGGIGYEIGP 270 (382)
T ss_dssp ---HHHHHHTCC---SCCCCEEEEEE--EEEECCCSTTSSCSEEEES-------TTTTEEEECCSSS-CCEEECSCCBSS
T ss_pred ---HHHHHcCCC---cCcCCCeeEeE--EEEEccCCcccCCCeEEec-------CCCeEEEEEeCCe-EEEecCCCCCCC
Confidence 222234543 00111111111 111221110011 111110 1134567777776 666641 11 11
Q ss_pred CCCCCCChH---HHHHHHH-hCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCC---Ccc--cCccccc
Q 013495 165 YHNPFLNPY---EEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA---GFL--NVPKIKG 235 (442)
Q Consensus 165 ~~~~~~~~~---~~~~~~~-~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAA---g~v--dp~~g~G 235 (442)
-.+...++. +.++.+. ..|.+ .+.+.+..-+ |+. ....++..+||... +++ ..+.+.|
T Consensus 271 ~~~~~~~~~~~~~l~~~~~~~~p~l----~~~~~~~~~~------g~r---~~t~d~~p~ig~~~~~~~~~~~~G~~g~G 337 (382)
T 1y56_B 271 TYDLTPTYEFLREVSYYFTKIIPAL----KNLLILRTWA------GYY---AKTPDSNPAIGRIEELNDYYIAAGFSGHG 337 (382)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHCGGG----GGSEEEEEEE------EEE---EECTTSCCEEEEESSSBTEEEEECCTTCH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCc----CCCCceEEEE------ecc---ccCCCCCcEeccCCCCCCEEEEEecCcch
Confidence 111112221 1223332 23433 2233332111 111 12235555666654 222 3477899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 013495 236 THTAMKSGMLAAEAGFG 252 (442)
Q Consensus 236 I~~Am~SG~lAAeai~~ 252 (442)
+..|...|+++|+.|..
T Consensus 338 ~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 338 FMMAPAVGEMVAELITK 354 (382)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHhC
Confidence 99999999999998864
No 47
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.46 E-value=2.6e-08 Score=74.23 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=44.0
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEe--cCCCccCCcccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN--AQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~--~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.|.+.|++| +.|+.+|| +++++.++ .+. ...++ .+.|++|+.|..+||++||++.
T Consensus 6 id~~~C~~C------g~C~~~CP-~~~~~~~~-~~~-~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 62 (64)
T 1dax_A 6 VDQDECIAC------ESCVEIAP-GAFAMDPE-IEK-AYVKDVEGASQEEVEEAMDTCPVQCIHWE 62 (64)
T ss_dssp ECSTTCCSC------CHHHHHCT-TTEEECSS-SSS-EEECCGGGSCHHHHHHHHHHSSSCCEECC
T ss_pred EccccCCCc------hHHHHhCC-ccEeEcCC-CCE-EEEecCCCcchhHHHHHHHhCCHhhEeee
Confidence 378999998 79999999 99988643 121 23344 7899999999999999999864
No 48
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.41 E-value=7.3e-06 Score=81.23 Aligned_cols=200 Identities=15% Similarity=0.021 Sum_probs=111.2
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
....++...+.+.|++.|++.|++|+.+++|+++..++ +. ++|++.+ | +++|+.||.|+|.+
T Consensus 147 ~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t~~---------------g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 147 TGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRCDA---------------G-SYRAAVLVNAAGAW 208 (381)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEECSS---------------E-EEEESEEEECCGGG
T ss_pred CCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEeCC---------------C-EEEcCEEEECCChh
Confidence 34568889999999999999999999999999999876 33 6788763 3 89999999999998
Q ss_pred CcccHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCc-EEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEecC
Q 013495 86 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGE-ILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN 164 (442)
Q Consensus 86 s~lar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~-~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~~ 164 (442)
| ..|.+.+|++. ....+. -|.--.+..+........ .+.. ..++.|+.|.. +.+-||-.....
T Consensus 209 s---~~l~~~~g~~~-~~~~p~---rg~~~~~~~~~~~~~~~~p~~~~--------~~~~~y~~p~~-g~~~ig~~~~~~ 272 (381)
T 3nyc_A 209 C---DAIAGLAGVRP-LGLQPK---RRSAFIFAPPPGIDCHDWPMLVS--------LDESFYLKPDA-GMLLGSPANADP 272 (381)
T ss_dssp H---HHHHHHHTCCC-CCCEEE---EEEEEEECCCTTCCCTTCCEEEE--------TTSSCEEEEET-TEEEEECCCCEE
T ss_pred H---HHHHHHhCCCC-Cceeee---EEEEEEECCCcCCCcCccceEEe--------CCCCEEEEeCC-CcEEEeCCcCCC
Confidence 5 33444456531 011111 111111222221111110 1111 11234677776 677666432211
Q ss_pred --CCCCCCCh---HHHHHHHHhCCCcccccCCCeEEeecceeeccCCCccCCccccCCEEEEccCCC---cc--cCcccc
Q 013495 165 --YHNPFLNP---YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAG---FL--NVPKIK 234 (442)
Q Consensus 165 --~~~~~~~~---~~~~~~~~~~P~i~~~l~~~~~~~~ga~~i~~gg~~~~~~~~~~g~llvGDAAg---~v--dp~~g~ 234 (442)
-.+...+. .+.++++...|.+ .+.+.+..-+ |+ ...+.++.-+||...+ ++ ..+.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~w~------G~---r~~t~D~~p~ig~~~~~~~l~~a~G~~g~ 339 (381)
T 3nyc_A 273 VEAHDVQPEQLDIATGMYLIEEATTL----TIRRPEHTWA------GL---RSFVADGDLVAGYAANAEGFFWVAAQGGY 339 (381)
T ss_dssp CCSSCCCCCHHHHHHHHHHHHHHBSC----CCCCCSEEEE------EE---EEECTTSCCEEEECTTSTTEEEEECCTTC
T ss_pred CCcccCCCChHHHHHHHHHHHhcCCC----cccceeeeeE------Ec---cccCCCCCceecCCCCCCCeEEEEcCCCh
Confidence 01111121 2233444433422 2222211000 11 1234466667776542 21 346788
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 013495 235 GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 235 GI~~Am~SG~lAAeai~~ 252 (442)
|+..|...|+++|+.|..
T Consensus 340 G~~~ap~~g~~la~~i~g 357 (381)
T 3nyc_A 340 GIQTSAAMGEASAALIRH 357 (381)
T ss_dssp TTTTHHHHHHHHHHHHTT
T ss_pred hHhhCHHHHHHHHHHHhC
Confidence 999999999999988853
No 49
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.40 E-value=3.1e-08 Score=72.45 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=42.7
Q ss_pred eEecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEE-ecCCCccCCcccccCCCCCeeEE
Q 013495 363 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-NAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 363 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i-~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
+.+ |.+.|++| +.|+++||. ++.+.++ +. ...+ +.+.|+.||.|..+||++||++.
T Consensus 3 ~~i-~~~~C~~C------~~C~~~Cp~-~~~~~~~--~~-~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 3 VRV-DADACIGC------GVCENLCPD-VFQLGDD--GK-AKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp SEE-CTTTCCSC------CSSTTTCTT-TBCCCSS--SC-CCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EEE-chhhCCCC------hHHHHhCcH-HHeECCC--CC-EeecCchhhHHHHHHHHHhCCHhHEEEe
Confidence 444 78999998 789999997 6665433 31 2233 37899999999999999999864
No 50
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=98.38 E-value=5.9e-08 Score=70.72 Aligned_cols=52 Identities=13% Similarity=0.062 Sum_probs=43.3
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEe--cCCCccCCcccccCCCCCeeE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN--AQNCLHCKACDIKDPKQNIKW 428 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~--~~~Ci~Cg~C~~~cp~~~I~w 428 (442)
.| +.|++| +.|+++||. ++++.++ + ..+.++ .+.|+.||.|..+||++||++
T Consensus 4 id-~~C~~C------~~C~~~CP~-~~~~~~~--~-~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~ 57 (58)
T 1f2g_A 4 VN-DDCMAC------EACVEICPD-VFEMNEE--G-DKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp CT-TTCCCC------CHHHHHCTT-TEEECSS--S-SSEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred EC-CcCccc------hHHHHhCCc-cEEECCC--C-cEEEeCCCccchHHHHHHHhhCChhhEEe
Confidence 37 899998 789999998 6776543 2 246778 899999999999999999986
No 51
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=98.34 E-value=1.6e-07 Score=86.44 Aligned_cols=65 Identities=17% Similarity=0.244 Sum_probs=51.9
Q ss_pred CCCCeE-ecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECc
Q 013495 359 QPAHLR-LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 431 (442)
Q Consensus 359 ~~~Hl~-v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~p 431 (442)
+.+++. ..+++.|..|. ..+|+.+||++++.+.++ + .+.+|.+.|+.||.|..+||++||++...
T Consensus 45 ~~~~~~~~~~~~~C~~C~----~p~C~~~CP~gAi~~~~~--g--~~~id~~~CigC~~C~~~CP~~Ai~~~~~ 110 (195)
T 2vpz_B 45 EYPNLVVEFRPEQCLHCE----NPPCVPVCPTGASYQTKD--G--LVLVDPKKCIACGACIAACPYDARYLHPA 110 (195)
T ss_dssp CTTSCEEEEEEEECCCCS----SCTTTTTCSSSCEEECTT--S--CEEECTTTCCCCCHHHHHCTTCCCEECTT
T ss_pred CCCceeEEECcccCcCcc----CcHHHHhcCCCceecccc--c--ceeecCCCCCCcChhHhhCCCCCeEECCC
Confidence 334443 23578999984 237999999999988643 4 68999999999999999999999998643
No 52
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=98.32 E-value=1.2e-07 Score=97.48 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=46.9
Q ss_pred eEecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEE-ecCCCccCCcccccCCCCCeeE
Q 013495 363 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-NAQNCLHCKACDIKDPKQNIKW 428 (442)
Q Consensus 363 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i-~~~~Ci~Cg~C~~~cp~~~I~w 428 (442)
..+.|.+.|+.| +.|+++||.++++..++ . ...+ |.+.|+.||.|+.+||++||.+
T Consensus 27 ~i~~d~~kCi~C------g~C~~~CP~~ai~~~~~---~-~~~i~~~~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQIDEAKCIGC------DTCSQYCPTAAIFGEMG---E-PHSIPHIEACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp SEEECTTTCCCC------CHHHHHCTTCCCBCCTT---S-CCBCCCGGGCCCCCTTGGGCTTCCEEE
T ss_pred eEEECcccCCCc------cHHHHhcCcCceecccc---c-ceeecChhhCCchhhHHHhhCcCCccc
Confidence 445589999999 79999999999876543 1 2345 8999999999999999999987
No 53
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.31 E-value=1.7e-07 Score=73.44 Aligned_cols=55 Identities=16% Similarity=0.090 Sum_probs=44.8
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEe-----------cCCCccCCcccccCCCCCeeEECc
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN-----------AQNCLHCKACDIKDPKQNIKWTVP 431 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~-----------~~~Ci~Cg~C~~~cp~~~I~w~~p 431 (442)
.|.+.|++| +.|+.+|| +++++.++ + +..+. .+.|..|+.|..+||++||++.-.
T Consensus 6 vd~~~CigC------g~C~~~CP-~~~~~~~~--g--~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~ 71 (81)
T 1iqz_A 6 VDKETCIAC------GACGAAAP-DIYDYDED--G--IAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADE 71 (81)
T ss_dssp ECTTTCCCC------SHHHHHCT-TTEEECTT--S--CEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESS
T ss_pred EecccCccc------ChhhHhCc-hheeeCCC--C--eEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecC
Confidence 489999998 79999999 88888643 3 33332 568999999999999999999854
No 54
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.30 E-value=9.8e-06 Score=83.94 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+-+.|++.++++|++|+++++|++|+.++ ++++||++.+ |.+++||.||.+.+....+
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLED---------------GRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------SCEEECSCEEECCC-----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecC---------------CcEEEcCEEEECCCHHHHH
Confidence 4788899999999999999999999999987 7899999985 5789999999888776554
No 55
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=98.20 E-value=4e-07 Score=91.00 Aligned_cols=59 Identities=12% Similarity=0.163 Sum_probs=49.3
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECc
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 431 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~p 431 (442)
.+++.|.+|. ..+|+.+||.+++...+. ++ .+.+|.+.|+.|+.|+.+||++||++...
T Consensus 146 ~~~~~C~~C~----~~~Cv~~CP~gAi~~~~~-~g--~v~id~~kCigCg~Cv~aCP~~Ai~~~~~ 204 (352)
T 2ivf_B 146 YLARMCNHCT----NPACLAACPTGAIYKRED-NG--IVLVDQERCKGHRHCVEACPYKAIYFNPV 204 (352)
T ss_dssp EEEECCCCCS----SCHHHHHCTTCCEEECTT-TC--CEEECTTTCCCCCHHHHHCTTCCEEEETT
T ss_pred ECCCCCcCcC----CccccccCCCCceeecCC-CC--eEEechhhcCCchHHHhhcCccceecccc
Confidence 4678999994 238999999999987642 24 68999999999999999999999998743
No 56
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=98.16 E-value=3.1e-07 Score=93.21 Aligned_cols=57 Identities=21% Similarity=0.398 Sum_probs=45.6
Q ss_pred CCCCCc-ccCCCCCccccccccccceEEEecCC-CCc--eeEEEecCCCccCCcccccCCCCCee
Q 013495 367 DPKIPE-LVNLPEYAGPESRYCPARVYEYVPDE-KNQ--LKLQINAQNCLHCKACDIKDPKQNIK 427 (442)
Q Consensus 367 d~~~c~-~~~~~~~~~~c~~~CPa~~y~~~~~~-~~~--~~~~i~~~~Ci~Cg~C~~~cp~~~I~ 427 (442)
|.+.|. .|+. +.|+.+||++|+++.+.+ +|+ +++.||.++|+.||.|+.+||++||+
T Consensus 214 d~e~~~~~Ce~----~~cv~~CPt~AI~~~~~~~~g~~~~~v~id~~~Ci~Cg~C~~~CP~~Ai~ 274 (386)
T 3or1_B 214 DHENLAELCEI----PLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYCGNCYTMCPALPLS 274 (386)
T ss_dssp CTTTHHHHCCH----HHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCCCHHHHHCTTCCCC
T ss_pred chhhhcccccc----hhhhhhCchhhccccccccCCccccccccCCCcCCccccHHHhCcHhhCc
Confidence 666665 4542 789999999999986421 242 47999999999999999999999985
No 57
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.15 E-value=3.7e-05 Score=76.45 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=52.5
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
...++..++.+.|.+.|++.|++|+.+++|+++..++++ +.|++.+ .+++|+.||.|+|+.+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~----------------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETAN----------------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETT----------------EEEEEEEEEECCGGGH
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCC----------------CEEEeCEEEEecCccH
Confidence 456788899999999999999999999999999987644 4566652 3799999999999974
No 58
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.15 E-value=8.8e-05 Score=72.77 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=61.2
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
....++...|.+.|++.|++.|++|+++++|+++..++++ ++.|++.+ |+ ..+++|+.||.|+|.+
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~------g~-------~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 143 STGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-GFELDFGG------AE-------PMTLSCRVLINAAGLH 208 (369)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-SEEEEECT------TS-------CEEEEEEEEEECCGGG
T ss_pred CCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-eEEEEECC------Cc-------eeEEEeCEEEECCCcc
Confidence 3456888899999999999999999999999999988644 34577653 21 2589999999999998
Q ss_pred CcccHHHHHhc-CCc
Q 013495 86 GSLSEKLIKNF-KLR 99 (442)
Q Consensus 86 s~lar~l~~~~-gl~ 99 (442)
+..|.+.+ |++
T Consensus 209 ---s~~l~~~~~g~~ 220 (369)
T 3dme_A 209 ---APGLARRIEGIP 220 (369)
T ss_dssp ---HHHHHHTEETSC
T ss_pred ---hHHHHHHhcCCC
Confidence 44555567 775
No 59
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.14 E-value=0.00016 Score=76.68 Aligned_cols=219 Identities=13% Similarity=0.113 Sum_probs=117.3
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.++-.+|...|++.|++.|++|+.+++|+++..++ +.|++|++.+. .+|+ +.+++|+.||.|+|.++
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~~s-- 232 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDR---LTDT-------THTIYAKKVVNAAGPWV-- 232 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEEEEEEEECCGGGH--
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEc---CCCc-------eEEEECCEEEECCCcch--
Confidence 67788999999999999999999999999999876 77889988641 1231 36899999999999985
Q ss_pred cHHHHHhcCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec---CC
Q 013495 89 SEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL---NY 165 (442)
Q Consensus 89 ar~l~~~~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~---~~ 165 (442)
..+.+..|... ..+-...-|. ++-++.........+.+ ..+ . ....-|+.|. ++.+-||..... +.
T Consensus 233 -~~l~~~~g~~~---~~~v~p~kG~--~lvl~~~~~~~~~~~~~-~~~-~--dgr~v~~iP~-~g~~~iGtT~~~~~~~~ 301 (561)
T 3da1_A 233 -DTLREKDRSKH---GKYLKLSKGV--HLVVDQSRFPLRQAVYF-DTE-S--DGRMIFAIPR-EGKTYIGTTDTFYDKDI 301 (561)
T ss_dssp -HHHHHTTTCCC---SSEEEEEEEE--EEEEEGGGSCCSSEEEE-CCS-S--SCCCEEEEEE-TTEEEECCCCEEECSCT
T ss_pred -HHHHHhcCCCC---CceEEeccEE--EEEECCccCCCceEEEe-ccC-C--CCcEEEEEec-CCCEEEcCCCCccCCCc
Confidence 33433455531 1111112232 22233221111222222 111 1 1112467788 567777753211 11
Q ss_pred CCCCCChHH---HHHHHH-hCCCcccccCCCeEEe--ecceeeccCCCccCCccccCCEEEEccCCCcccCcccccHHHH
Q 013495 166 HNPFLNPYE---EFQKFK-HHPAIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTA 239 (442)
Q Consensus 166 ~~~~~~~~~---~~~~~~-~~P~i~~~l~~~~~~~--~ga~~i~~gg~~~~~~~~~~g~llvGDAAg~vdp~~g~GI~~A 239 (442)
.++..++.+ .++... -.|.+. +.....+. .|.|.+...+-.+..+++.+.++..+ ..|+++.+-|+ +.++
T Consensus 302 ~~~~~t~~~i~~ll~~~~~~~P~l~--~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt~ 377 (561)
T 3da1_A 302 ASPRMTVEDRDYILAAANYMFPSLR--LTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTGY 377 (561)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCTTCC--CCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STTH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCC--CChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhhH
Confidence 233333322 222222 224332 11223322 23454432211112245556666665 47899988777 7666
Q ss_pred HHHHHHHHHHHHhhhc
Q 013495 240 MKSGMLAAEAGFGVLH 255 (442)
Q Consensus 240 m~SG~lAAeai~~al~ 255 (442)
..=|..+++.+.+.+.
T Consensus 378 r~mAe~~~d~~~~~~~ 393 (561)
T 3da1_A 378 RKMAERTVDAVAQGLN 393 (561)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcC
Confidence 6666667776666654
No 60
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=98.13 E-value=1.2e-06 Score=84.87 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=47.7
Q ss_pred CCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECcC
Q 013495 367 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVPE 432 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~p~ 432 (442)
.+..|..|. ..+|+.+||+ ++...++ + .+.+|.++|+.|+.|..+||+++|++....
T Consensus 64 ~~~~C~~C~----~p~C~~~CP~-Ai~~~~~--g--~v~id~~~CigC~~C~~~CP~~Ai~~~~~~ 120 (274)
T 1ti6_B 64 RPTPCMHCE----NAPCVAKGNG-AVYQRED--G--IVLIDPEKAKGKKELLDTCPYGVMYWNEEE 120 (274)
T ss_dssp EEECCCCCT----TCHHHHHTTT-SEEECTT--S--CEEECTTTTTTCGGGGGGCSSCCCEEETTT
T ss_pred cCCcCCCCC----ChHHHhhChH-HhhhccC--C--cEEechhhccchHHHHhhCccCCeEEEccc
Confidence 468899995 3469999999 8876533 4 689999999999999999999999998543
No 61
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=98.13 E-value=8e-07 Score=86.94 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=48.0
Q ss_pred CCCCCcccCCCCCcccccccccc-ceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEEC
Q 013495 367 DPKIPELVNLPEYAGPESRYCPA-RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 430 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa-~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~ 430 (442)
+++.|..|. +.+|+.+||+ +++...++ + .+.+|.+.|+.||.|..+||+++|++..
T Consensus 96 ~~~~C~~C~----~~~C~~~CP~~gAi~~~~~--g--~v~id~~~CigCg~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 96 RKDGCMHCE----DPGCLKACPSAGAIIQYAN--G--IVDFQSENCIGCGYCIAGCPFNIPRLNK 152 (294)
T ss_dssp EEESCCCBS----SCHHHHHCCSTTSEEEETT--S--CEEECGGGCCCCCHHHHHCTTCCCEEET
T ss_pred CcccCCCcC----ChhhhhhCCccCccccccc--c--ceEeCcccCCCcchhhhcCCCCCcEecC
Confidence 578899994 2389999999 99987543 4 7999999999999999999999999864
No 62
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=98.12 E-value=7.6e-07 Score=92.78 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=49.5
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECc
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 431 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~p 431 (442)
.+++.|..|. ..+|+.+||.+++.+.++ ++ .+.+|.+.|+.||.|..+||++||++...
T Consensus 179 ~~~~~C~~C~----~~~Cv~aCP~gAI~~~~~-~g--~v~id~~kCigCg~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 179 YLPRLCEHCL----NPACVATCPSGAIYKREE-DG--IVLIDQDKCRGWRMCITGCPYKKIYFNWK 237 (512)
T ss_dssp EEEECCCCCS----SCHHHHTCTTCCEEEETT-TC--CEEECTTTCCCCCCHHHHCTTCCEEEETT
T ss_pred ecCccCcCCC----CchhhhhCCcCcEEeecC-CC--eEEECHHHCCCchHHHhhCCccceecccC
Confidence 3688999994 237999999999988632 23 68999999999999999999999998743
No 63
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.12 E-value=0.0002 Score=69.60 Aligned_cols=36 Identities=22% Similarity=-0.067 Sum_probs=31.9
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
.+|++|+|||+. +.||+.|+.||..+|+.|.+.++.
T Consensus 294 ~~rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 294 DLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 489999999995 459999999999999999988764
No 64
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.09 E-value=1.8e-05 Score=85.78 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=55.3
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.+..++...+.+.|.+.|++.|++|+.+++|+++..++ +. ++|++.+ |.+++|+.||+|+|..
T Consensus 410 ~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~-v~V~t~~---------------G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 410 QGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DC-WLLNFAG---------------DQQATHSVVVLANGHQ 472 (676)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEETT---------------SCEEEESEEEECCGGG
T ss_pred CCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-Ce-EEEEECC---------------CCEEECCEEEECCCcc
Confidence 34567889999999999999999999999999999886 43 5787753 3579999999999998
Q ss_pred Cc
Q 013495 86 GS 87 (442)
Q Consensus 86 s~ 87 (442)
|.
T Consensus 473 s~ 474 (676)
T 3ps9_A 473 IS 474 (676)
T ss_dssp GG
T ss_pred hh
Confidence 65
No 65
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=98.05 E-value=5.6e-07 Score=66.92 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=41.9
Q ss_pred cCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEe---cC--CCccCCcccccCCCCCeeEE
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN---AQ--NCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~---~~--~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.|++.|++| +.|+.+||. ++++.++ +. ...++ .+ .|..|+.|..+||++||+++
T Consensus 6 id~~~C~~C------~~C~~~Cp~-~~~~~~~--~~-~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 6 VDQDTCIGD------AICASLCPD-VFEMNDE--GK-AQPKVEVIEDEELYNCAKEAMEACPVSAITIE 64 (66)
T ss_dssp ECTTTCCCC------CHHHHHCTT-TEEECTT--SC-EEESCSCBCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred ECcccCcCc------hHHHHhCCc-eEEECCC--Cc-eeecccCCCcHHHHHHHHHHHhhCCHhhEEEe
Confidence 488999998 789999995 8888543 31 23444 24 47889999999999999875
No 66
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.04 E-value=2.5e-05 Score=84.80 Aligned_cols=64 Identities=16% Similarity=0.038 Sum_probs=54.0
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCce-EEEEcEEEeccCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCR 85 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~-~i~Ak~vI~AdG~~ 85 (442)
+..++...+.+.|.+.|++.|++|+.+++|+++..++++ ++|++.+ |. +++|+.||+|+|..
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~---------------G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQ---------------SQAAKHHATVILATGHR 468 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC----------------CCCCEEESEEEECCGGG
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCC---------------CcEEEECCEEEECCCcc
Confidence 445688899999999999999999999999999988744 4677753 34 79999999999998
Q ss_pred Cc
Q 013495 86 GS 87 (442)
Q Consensus 86 s~ 87 (442)
|.
T Consensus 469 s~ 470 (689)
T 3pvc_A 469 LP 470 (689)
T ss_dssp TT
T ss_pred hh
Confidence 65
No 67
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=98.02 E-value=7.5e-07 Score=89.77 Aligned_cols=54 Identities=11% Similarity=0.332 Sum_probs=44.7
Q ss_pred CCCCC-cccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCee
Q 013495 367 DPKIP-ELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIK 427 (442)
Q Consensus 367 d~~~c-~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~ 427 (442)
|.+.| ..|+. +.|+.+||++|+++.++ ++ ++.||.++|+.||.|+.+||++||+
T Consensus 203 d~~~c~~~Ce~----~~Cv~~CP~~AI~~~~~-~~--~~~id~~~C~~Cg~C~~~CP~~Ai~ 257 (366)
T 3mm5_B 203 NDEAIRKTCEI----PSTVAACPTGALKPDMK-NK--TIKVDVEKCMYCGNCYTMCPGMPLF 257 (366)
T ss_dssp CHHHHHHHCCH----HHHHHTCTTCCEEEETT-TT--EEEECGGGCCCCCHHHHHCTTCCCC
T ss_pred cchhccccccc----cchhccCCccceEecCC-CC--eEEEehhhCCCcchHHHhCCHhhcc
Confidence 55555 45652 78999999999999753 23 8999999999999999999999985
No 68
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=98.02 E-value=1.6e-06 Score=92.98 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=50.0
Q ss_pred CCeEecCCCCCc--ccCCCCCccccccccccc-----eEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 361 AHLRLRDPKIPE--LVNLPEYAGPESRYCPAR-----VYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 361 ~Hl~v~d~~~c~--~~~~~~~~~~c~~~CPa~-----~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
..|-|.|.|.|. +|. .-|.++||.. |+++.++ ++ +..|+.+-|+.||-|+.+||++||+-.
T Consensus 6 ~~~~~~~~~~c~~~~~~-----~~c~~~cp~~~~~~~~~~~~~~-~~--~~~i~~~~c~~~~~~~~~cp~~~i~i~ 73 (608)
T 3j16_B 6 SRIAIVSADKCKPKKCR-----QECKRSCPVVKTGKLCIEVTPT-SK--IAFISEILCIGCGICVKKCPFDAIQII 73 (608)
T ss_dssp EEEEEECSSSCCHHHHC-----SHHHHHCHHHHHTCCSEEEETT-TT--EEEECTTTCCCCCHHHHHCSSCCEEEE
T ss_pred ceEEEEeccccCccccc-----cchhhcCCCccCCceEEEEcCC-CC--ceEEehhhccccccccccCCccceEEe
Confidence 357788888886 475 5899999963 8887654 23 899999999999999999999999853
No 69
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.98 E-value=0.00025 Score=73.88 Aligned_cols=215 Identities=13% Similarity=-0.006 Sum_probs=115.5
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.++..+|...|++.|++.|++|+.+++|+++..++ .+++|++.+. .+|+ ..+++||.||.|+|.++.
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~---~~G~-------~~~i~A~~VV~AtG~~s~- 211 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDI---DTGK-------KYSWQARGLVNATGPWVK- 211 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEET---TTCC-------EEEEEESCEEECCGGGHH-
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEEC---CCCC-------EEEEECCEEEECCChhHH-
Confidence 47899999999999999999999999999998875 5778887420 1221 147999999999999854
Q ss_pred cHHHHHh-cCCcccccCCCceEEEEEEEEEeeCCCCCCCCcEEEEecCCCCCCCCceEEEEEcCCCeEEEEEEEec---C
Q 013495 89 SEKLIKN-FKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL---N 164 (442)
Q Consensus 89 ar~l~~~-~gl~~~~~~~~~~~~~g~ke~~~~~~~~~~~g~~~~~~G~pl~~~~~Gggwiy~~~~~~vsVGlv~~~---~ 164 (442)
.+.+. ++........+. -|. ++.+++. ........+. . . ...+.|++|..++.+.||..-.. +
T Consensus 212 --~l~~~~l~~~~~~~i~p~---rG~--~~~~~~~-~~~~~~~~~~-~--~--dg~~~~~~P~~~g~~~iG~t~~~~~~~ 278 (501)
T 2qcu_A 212 --QFFDDGMHLPSPYGIRLI---KGS--HIVVPRV-HTQKQAYILQ-N--E--DKRIVFVIPWMDEFSIIGTTDVEYKGD 278 (501)
T ss_dssp --HHHHHHTCCCCSSCBCCE---EEE--EEEEECS-SSCSCEEEEE-C--T--TSCEEEEEEETTTEEEEECCCEECCSC
T ss_pred --HHHHHhccCCcccccccc---eeE--EEEECCC-CCCceEEEee-c--C--CCCEEEEEEcCCCcEEEcCCCCCCCCC
Confidence 33322 333200011221 121 1122221 1111222111 1 1 11345788887777777753211 1
Q ss_pred CCCCCCChH--H-HHHHHH-hCC-CcccccCCCeEE-e-ecceeeccCCCccCCccccCCEEE--EccC-CCcccCcccc
Q 013495 165 YHNPFLNPY--E-EFQKFK-HHP-AIKPLLEGGTVV-Q-YGARTLNEGGLQSIPYPVFPGGAI--IGCA-AGFLNVPKIK 234 (442)
Q Consensus 165 ~~~~~~~~~--~-~~~~~~-~~P-~i~~~l~~~~~~-~-~ga~~i~~gg~~~~~~~~~~g~ll--vGDA-Ag~vdp~~g~ 234 (442)
..++..++. + .++... ..| .+. ..+.+ . .|.+.+...+.....++..+.++. .++. .|++. ++|.
T Consensus 279 ~~~~~~~~~~~~~l~~~~~~~~p~~l~----~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~-i~Gg 353 (501)
T 2qcu_A 279 PKAVKIEESEINYLLNVYNTHFKKQLS----RDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLS-VFGG 353 (501)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHBSSCCC----GGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEE-EECC
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCCC----cccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEE-EeCc
Confidence 112222322 1 222222 234 222 22222 1 244444433322122344566666 5654 45554 5677
Q ss_pred cHHHHHHHHHHHHHHHHhhh
Q 013495 235 GTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 235 GI~~Am~SG~lAAeai~~al 254 (442)
|+..+-.-|..+++.+.+.+
T Consensus 354 ~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 354 KLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp CGGGHHHHHHHHHHHHGGGS
T ss_pred cccchHHHHHHHHHHHHHhh
Confidence 88887777777777777665
No 70
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=97.93 E-value=4.3e-06 Score=96.03 Aligned_cols=60 Identities=22% Similarity=0.357 Sum_probs=48.3
Q ss_pred EecCCCCCcccCCCCCccccccccccceEEEe---cCC------------------CC-ceeEEEecCCCccCCcccccC
Q 013495 364 RLRDPKIPELVNLPEYAGPESRYCPARVYEYV---PDE------------------KN-QLKLQINAQNCLHCKACDIKD 421 (442)
Q Consensus 364 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~---~~~------------------~~-~~~~~i~~~~Ci~Cg~C~~~c 421 (442)
-+.|.+.|+.| +.|+++||.+++++. +++ ++ ...+.++.+.|+.||.|+.+|
T Consensus 681 p~~d~~kCi~C------g~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG~Cv~vC 754 (1231)
T 2c42_A 681 PQWVPENCIQC------NQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADIC 754 (1231)
T ss_dssp EEECTTTCCCC------CHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHC
T ss_pred eEEeCccCCch------hhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChhHHHhhC
Confidence 35589999999 689999999999864 110 01 125789999999999999999
Q ss_pred CC--CCeeEE
Q 013495 422 PK--QNIKWT 429 (442)
Q Consensus 422 p~--~~I~w~ 429 (442)
|+ +||+..
T Consensus 755 P~~~~AI~~~ 764 (1231)
T 2c42_A 755 PPKEKALVMQ 764 (1231)
T ss_dssp SSSSCSEEEE
T ss_pred CCCccCeEEe
Confidence 99 999876
No 71
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.87 E-value=0.0002 Score=63.60 Aligned_cols=62 Identities=23% Similarity=0.287 Sum_probs=50.9
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
++...+.++|.+++++.|++++.+ +|+++..++++ +.|++.+ + ++.++.||.|+|.++.+.
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~---------------g-~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEE---------------G-VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSS---------------C-EEEEEEEEECCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECC---------------C-EEEECEEEECCCCCCCcc
Confidence 346789999999999999999999 99999877544 4566653 4 899999999999998654
Q ss_pred H
Q 013495 90 E 90 (442)
Q Consensus 90 r 90 (442)
+
T Consensus 114 ~ 114 (180)
T 2ywl_A 114 S 114 (180)
T ss_dssp H
T ss_pred c
Confidence 4
No 72
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.85 E-value=9.9e-05 Score=75.32 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=58.5
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEc--------------CCCcEEEEEeCCccccCCCCCccCCCCceE
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYD--------------ADNKVIGIGTNDMGIAKDGSKKENFQRGVE 72 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~--------------~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~ 72 (442)
...++..++.+.|.+.|++.|++|+.+++|+++..+ +++.|++|++.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 445777899999999999999999999999999882 235677888763 3 6
Q ss_pred E--EEcEEEeccCCCCcccHHHHHhcCCc
Q 013495 73 L--RGRITLLAEGCRGSLSEKLIKNFKLR 99 (442)
Q Consensus 73 i--~Ak~vI~AdG~~s~lar~l~~~~gl~ 99 (442)
+ +|+.||.|+|..+. +|.+.+|+.
T Consensus 239 i~~~Ad~VV~AtG~~s~---~l~~~~g~~ 264 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWSN---RLLNPLGID 264 (448)
T ss_dssp EEEEEEEEEECCGGGHH---HHHGGGTCC
T ss_pred EeecCCEEEECCCcCHH---HHHHHcCCC
Confidence 8 99999999999854 444445554
No 73
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.81 E-value=0.00046 Score=68.97 Aligned_cols=62 Identities=21% Similarity=0.223 Sum_probs=51.7
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+..++...+.+.|.+.|++.|++|+.+++|+++..++ +. +.|++.+ .+++|+.||+|+|.++
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-v~v~t~~----------------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDA-DG-VSVTTDR----------------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TE-EEEEESS----------------CEEEEEEEEECCGGGH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-Ce-EEEEECC----------------CEEEcCEEEEcCCcCh
Confidence 4577888999999999999999999999999999876 33 3466542 3799999999999973
No 74
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.79 E-value=1.9e-06 Score=91.77 Aligned_cols=58 Identities=21% Similarity=0.287 Sum_probs=47.3
Q ss_pred EecCCCCCcccCCCCCcccccccccc----ceEEEecCCCCce-------eEEEecCCCccCCcccccCCCCCeeEE
Q 013495 364 RLRDPKIPELVNLPEYAGPESRYCPA----RVYEYVPDEKNQL-------KLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 364 ~v~d~~~c~~~~~~~~~~~c~~~CPa----~~y~~~~~~~~~~-------~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
...|.+.|+.| +.|+++||. +++.+.++ |.. ...+|.+.|+.||.|+.+||++||++.
T Consensus 140 i~~d~~kCi~C------g~Cv~~CP~~~~~~ai~~~~~--g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~ 208 (574)
T 3c8y_A 140 LTVDRTKCLLC------GRCVNACGKNTETYAMKFLNK--NGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEK 208 (574)
T ss_dssp EEEEGGGCCCC------CHHHHHHHHHHSCCCSEEEEE--TTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred ceeCcccCcCC------CCccchhCchhcCCceeeccC--CccceecccccceechhhCCcchhHHHhhccCCcccc
Confidence 34488999999 789999997 89887653 211 245788999999999999999999875
No 75
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.77 E-value=0.00012 Score=74.08 Aligned_cols=66 Identities=15% Similarity=0.165 Sum_probs=50.1
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEe---------EEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcE
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAAS---------EILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRI 77 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~---------~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~ 77 (442)
...++...|.++|.+.|++.|++|+.+++|+ ++..++ +.+ +|++.+ + +++|+.
T Consensus 166 ~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~---------------g-~i~a~~ 227 (405)
T 3c4n_A 166 ALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-THQ-IVVHET---------------R-QIRAGV 227 (405)
T ss_dssp CEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCC---------------E-EEEEEE
T ss_pred CEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-CeE-EEEECC---------------c-EEECCE
Confidence 4577889999999999999999999999999 887665 444 666542 3 799999
Q ss_pred EEeccCCCC-cccH
Q 013495 78 TLLAEGCRG-SLSE 90 (442)
Q Consensus 78 vI~AdG~~s-~lar 90 (442)
||+|+|.+| .|.+
T Consensus 228 VV~A~G~~s~~l~~ 241 (405)
T 3c4n_A 228 IIVAAGAAGPALVE 241 (405)
T ss_dssp EEECCGGGHHHHHH
T ss_pred EEECCCccHHHHHH
Confidence 999999986 4444
No 76
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.77 E-value=1.1e-05 Score=91.75 Aligned_cols=57 Identities=16% Similarity=0.286 Sum_probs=48.2
Q ss_pred ecCCCCCcccCCCCCcccccccccc---ceEEEecCCCCceeEEEecCCCccCCcccccCCC-CCeeEECc
Q 013495 365 LRDPKIPELVNLPEYAGPESRYCPA---RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPK-QNIKWTVP 431 (442)
Q Consensus 365 v~d~~~c~~~~~~~~~~~c~~~CPa---~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~-~~I~w~~p 431 (442)
..|.+.|+.| +.|+.+||. +++++.++ + .+..++ +.|+.||.|..+||+ +||++..-
T Consensus 947 ~id~~~C~~C------g~C~~~CP~~~~~ai~~~~~-~--~~~~~~-~~C~~Cg~C~~~CP~~~Ai~~~~~ 1007 (1025)
T 1gte_A 947 VIDEEMCINC------GKCYMTCNDSGYQAIQFDPE-T--HLPTVT-DTCTGCTLCLSVCPIIDCIRMVSR 1007 (1025)
T ss_dssp EECTTTCCCC------CHHHHHHHHHSCSCEEECTT-T--CCEEEC-TTCCCCCHHHHHCSSTTTEEEEEC
T ss_pred EEEcccCccc------CHHHHhcCccccCCEEEeCC-C--ceEEeC-ccCCChhHHHhhCCCCCCEEEecC
Confidence 4589999999 799999997 89988654 1 257788 999999999999999 99998743
No 77
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=97.72 E-value=8.2e-06 Score=83.29 Aligned_cols=41 Identities=24% Similarity=0.540 Sum_probs=37.0
Q ss_pred cccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCe
Q 013495 381 GPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNI 426 (442)
Q Consensus 381 ~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I 426 (442)
+.|+.+||++|++++++ ++.||.++|++||.|+.+||+.++
T Consensus 261 ~~cv~~CPt~Ai~~~~~-----~~~id~~~Ci~Cg~Ci~~CP~~~~ 301 (418)
T 3mm5_A 261 NEVVKLCPTGAIKWDGK-----ELTIDNRECVRCMHCINKMPKALK 301 (418)
T ss_dssp HHTGGGCTTCCEEECSS-----CEEECTTTCCCCCHHHHHCTTTEE
T ss_pred ccccccCCccccccCCc-----eeEEChhhcCccChhHHhCcHhhc
Confidence 67999999999999643 899999999999999999999654
No 78
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=97.72 E-value=1.2e-05 Score=77.83 Aligned_cols=54 Identities=22% Similarity=0.322 Sum_probs=45.9
Q ss_pred eEecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccC----------C---cccccCCCCCeeEE
Q 013495 363 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC----------K---ACDIKDPKQNIKWT 429 (442)
Q Consensus 363 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~C----------g---~C~~~cp~~~I~w~ 429 (442)
+.+.|.+.|+.| +.|..+||.+++++.++ .+ +.++|..| | .|+.+||++||+|.
T Consensus 91 ~v~id~~~CigC------~~C~~~CP~~Ai~~~~~-~~------~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~ 157 (274)
T 1ti6_B 91 IVLIDPEKAKGK------KELLDTCPYGVMYWNEE-EN------VAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFL 157 (274)
T ss_dssp CEEECTTTTTTC------GGGGGGCSSCCCEEETT-TT------EEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEE
T ss_pred cEEechhhccch------HHHHhhCccCCeEEEcc-cC------ccccCCCchhhhhhhccCCCCcchhhhCCcCceEEc
Confidence 345589999998 78999999999998764 12 46799999 9 99999999999985
No 79
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=97.67 E-value=8e-06 Score=76.11 Aligned_cols=57 Identities=7% Similarity=-0.136 Sum_probs=47.9
Q ss_pred CCCCCcccCCCCCccccccccc---cceEEEecCCCCceeEEEecCCCc--cCCcccccCCCCCeeEEC
Q 013495 367 DPKIPELVNLPEYAGPESRYCP---ARVYEYVPDEKNQLKLQINAQNCL--HCKACDIKDPKQNIKWTV 430 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CP---a~~y~~~~~~~~~~~~~i~~~~Ci--~Cg~C~~~cp~~~I~w~~ 430 (442)
++..|..|. ..+|+.+|| .+++...+. ++ .+.||.+.|+ .|+.|..+||++||++..
T Consensus 68 ~~~~C~~C~----~p~C~~~CP~~~~gAi~~~~~-~g--~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~ 129 (214)
T 1h0h_B 68 FPDQCRHCI----APPCKATADMEDESAIIHDDA-TG--CVLFTPKTKDLEDYESVISACPYDVPRKVA 129 (214)
T ss_dssp EEECCCCCS----SCHHHHHHTTTCTTSEEECTT-TC--CEEECGGGGGCSCHHHHHHHCTTCCCEECT
T ss_pred cCCcCcCcC----CchhhccCCccccccEEecCC-CC--eEEEeHHHCccccccHHHHhcCCCCeEecC
Confidence 468999995 247999999 999987642 24 6999999999 999999999999999864
No 80
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.64 E-value=0.00012 Score=73.04 Aligned_cols=89 Identities=9% Similarity=0.137 Sum_probs=64.6
Q ss_pred CCEEEeh--HHHHHHHHHHHHH-CCcEEecCCeEeEEEEcCC----------------C--cEEEEEeCCccccCCCCCc
Q 013495 6 NGNRKSL--SQLVRWLGGKAEE-LGVEIYPGFAASEILYDAD----------------N--KVIGIGTNDMGIAKDGSKK 64 (442)
Q Consensus 6 ~~y~v~R--~~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~----------------g--~v~gV~t~~~g~~~~G~~~ 64 (442)
|.|.+.+ .++.+.|.+++++ .|++|+.++.|.+++.+++ | +|.||.+...-+..+|...
T Consensus 151 G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~ 230 (344)
T 3jsk_A 151 GDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQ 230 (344)
T ss_dssp SSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSS
T ss_pred CCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcc
Confidence 4555544 6788999999998 5999999999999998763 3 7889987532222233211
Q ss_pred cCCCCceEEEEcEEEeccCCCCcccHHHHHh
Q 013495 65 ENFQRGVELRGRITLLAEGCRGSLSEKLIKN 95 (442)
Q Consensus 65 ~~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~ 95 (442)
... ...+|+|++||+|+|..|.+.+.+.++
T Consensus 231 ~~~-d~~~i~Ak~VV~ATG~~s~v~~~~~~~ 260 (344)
T 3jsk_A 231 SAM-DPNTINAPVIISTTGHDGPFGAFSVKR 260 (344)
T ss_dssp SCC-BCEEEECSEEEECCCSSSSSSCHHHHH
T ss_pred ccc-CceEEEcCEEEECCCCCchhhHHHHHH
Confidence 111 236899999999999999988877554
No 81
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.64 E-value=0.00011 Score=74.75 Aligned_cols=64 Identities=22% Similarity=0.329 Sum_probs=56.5
Q ss_pred EEEehHHHHHHHHHHHHHCCcEEecCC---eEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 8 NRKSLSQLVRWLGGKAEELGVEIYPGF---AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gvei~~g~---~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
..++...+.+.|++.|++.||+|++++ +|+++..++ +.|+||++.+ |.+++|+.||+|+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~---------------G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTAD---------------GKIWRAERTFLCAGA 219 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETT---------------TEEEECSEEEECCGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECC---------------CCEEECCEEEECCCC
Confidence 566778999999999999999999999 999999876 6788899874 468999999999999
Q ss_pred CCc
Q 013495 85 RGS 87 (442)
Q Consensus 85 ~s~ 87 (442)
.|.
T Consensus 220 ~s~ 222 (438)
T 3dje_A 220 SAG 222 (438)
T ss_dssp GGG
T ss_pred Chh
Confidence 864
No 82
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.53 E-value=0.00028 Score=74.65 Aligned_cols=84 Identities=17% Similarity=0.329 Sum_probs=65.3
Q ss_pred ehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccH
Q 013495 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSE 90 (442)
Q Consensus 11 ~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar 90 (442)
.+..+.+.|.+.+++.|++|+++++|+++..++ +.+++|++.+ |.+++|+.||+|+|.++.-.-
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~~~~ 281 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSN---------------GEEIKSRHVVLAVGHSARDTF 281 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEEETT---------------SCEEECSCEEECCCTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEEECC---------------CCEEECCEEEECCCCChhhHH
Confidence 346788899999999999999999999999876 6788898874 468999999999999985332
Q ss_pred HHHHhcCCcccccCCCceEEEEEE
Q 013495 91 KLIKNFKLREKSHAQHQTYALGIK 114 (442)
Q Consensus 91 ~l~~~~gl~~~~~~~~~~~~~g~k 114 (442)
.+++..|+. ..+..+.+|++
T Consensus 282 ~~l~~~Gi~----~~~~~~~vgVr 301 (549)
T 3nlc_A 282 EMLHERGVY----MEAKPFSVGFR 301 (549)
T ss_dssp HHHHHTTCC----CEECCEEEEEE
T ss_pred HHHHHcCCC----cccceEEEEEE
Confidence 344556765 23345677776
No 83
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=97.52 E-value=2.8e-05 Score=79.54 Aligned_cols=40 Identities=25% Similarity=0.547 Sum_probs=36.2
Q ss_pred cccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCC
Q 013495 381 GPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQN 425 (442)
Q Consensus 381 ~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~ 425 (442)
+.|+..||++|++++.+ ++.||.++|+.||.|+.+||+.+
T Consensus 278 ~~vv~~CPt~ai~~~~~-----~l~Id~~~C~~Cg~Ci~~CP~al 317 (437)
T 3or1_A 278 AEVVGLCPTGCMTYESG-----TLSIDNKNCTRCMHCINTMPRAL 317 (437)
T ss_dssp HHTTTTCTTCCEEEETT-----EEEECGGGCCCCSHHHHHCTTTE
T ss_pred hhhhccCcHHheeecCC-----EEEEccccCCchhhhHhhCcHhh
Confidence 46899999999999754 89999999999999999999855
No 84
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.50 E-value=0.00025 Score=72.75 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 12 R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
...+.+.|.+++++.||+|+.+++|+++..++ +.|++|++.+ |.+++|+.||+|+|..|
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~~~---------------G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVILQT---------------GEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------CCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEECC---------------CCEEECCEEEECCCCCc
Confidence 46888999999999999999999999999875 6778898864 34699999999999999
No 85
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=97.46 E-value=4.5e-05 Score=76.16 Aligned_cols=53 Identities=19% Similarity=0.348 Sum_probs=44.8
Q ss_pred EecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 013495 364 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 429 (442)
Q Consensus 364 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg---------~C~~~cp~~~I~w~ 429 (442)
.+.|.+.|+.| +.|+.+||.+++++.+. .+ +.++|+.|+ .|+.+||++||.+.
T Consensus 177 v~id~~kCigC------g~Cv~aCP~~Ai~~~~~-~~------~~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g 238 (352)
T 2ivf_B 177 VLVDQERCKGH------RHCVEACPYKAIYFNPV-SQ------TSEKCILCYPRIEKGIANACNRQCPGRVRAFG 238 (352)
T ss_dssp EEECTTTCCCC------CHHHHHCTTCCEEEETT-TT------EEEECCTTHHHHTTTBCCHHHHTCTTCCEEEE
T ss_pred EEechhhcCCc------hHHHhhcCccceecccc-cc------cccccCCCcchhhcCCCChHHHhcCccceecc
Confidence 44588999998 78999999999998764 11 467899996 99999999999884
No 86
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.45 E-value=0.00023 Score=75.42 Aligned_cols=74 Identities=19% Similarity=0.274 Sum_probs=59.5
Q ss_pred ehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccH
Q 013495 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSE 90 (442)
Q Consensus 11 ~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar 90 (442)
....+.+.|.+++++.||+|+++++|++++.+++|+|+||++.+ .+|+ ..+|+||.||+|+|..|.. +
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~----~~g~-------~~~i~A~~VVlAtGg~s~~-~ 315 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHG----KHTG-------YYMIGAKSVVLATGGYGMN-K 315 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEE----TTTE-------EEEEEEEEEEECCCCCTTC-H
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEe----CCCc-------EEEEEcCEEEEecCCcccC-H
Confidence 46679999999999999999999999999987657899998763 2331 1379999999999999987 4
Q ss_pred HHHHhc
Q 013495 91 KLIKNF 96 (442)
Q Consensus 91 ~l~~~~ 96 (442)
++++++
T Consensus 316 ~~~~~~ 321 (566)
T 1qo8_A 316 EMIAYY 321 (566)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 454444
No 87
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=97.43 E-value=2.8e-05 Score=71.31 Aligned_cols=52 Identities=25% Similarity=0.344 Sum_probs=44.5
Q ss_pred EecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 013495 364 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 429 (442)
Q Consensus 364 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg---------~C~~~cp~~~I~w~ 429 (442)
.+.|.+.|+.| +.|+.+||.+++++.++ . . .+.|+.|+ .|+.+||++||++.
T Consensus 83 ~~id~~~CigC------~~C~~~CP~~Ai~~~~~--~--~----~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g 143 (195)
T 2vpz_B 83 VLVDPKKCIAC------GACIAACPYDARYLHPA--G--Y----VSKCTFCAHRLEKGKVPACVETCPTYCRTFG 143 (195)
T ss_dssp EEECTTTCCCC------CHHHHHCTTCCCEECTT--S--S----EECCCTTHHHHHTTCCCHHHHSCTTCCEEEE
T ss_pred eeecCCCCCCc------ChhHhhCCCCCeEECCC--C--C----CccCcCcchHHhCCCCchhHhhCCcccEEEe
Confidence 34588999998 78999999999998765 1 1 57899999 79999999999985
No 88
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=97.39 E-value=4.1e-05 Score=84.47 Aligned_cols=56 Identities=11% Similarity=-0.028 Sum_probs=43.5
Q ss_pred ecCCCCCcccCCCCCcccccccc----ccceEEEecCCCCceeEEEecC----CCccCCcccccCCCCCeeEE
Q 013495 365 LRDPKIPELVNLPEYAGPESRYC----PARVYEYVPDEKNQLKLQINAQ----NCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 365 v~d~~~c~~~~~~~~~~~c~~~C----Pa~~y~~~~~~~~~~~~~i~~~----~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
+.|.+.|+.| +.|+++| |.+++.+... +. ...|+.. .|+.||.|+.+||++||+-.
T Consensus 175 ~~d~~~CI~C------~~Cv~~C~~~~~~~~i~~~~~--g~-~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~ 238 (783)
T 3i9v_3 175 ILDRERCIHC------KRCVRYFEEVPGDEVLDFIER--GV-HTFIGTMDFGLPSGFSGNITDICPVGALLDL 238 (783)
T ss_dssp EECTTTCCCC------CHHHHHHHHTTCCCCCEECSC--TT-SCCEECSSTTCCSTTTTTHHHHCSSSSEEEG
T ss_pred EEchhhCCCc------cHHHHHhhhhcCCceeeeecC--CC-ccEEccCCCCCCCccchhHHhhcccCceecc
Confidence 4489999999 7999999 7788887653 21 2334433 79999999999999999754
No 89
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.33 E-value=0.014 Score=61.85 Aligned_cols=67 Identities=21% Similarity=0.318 Sum_probs=54.2
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.++-.++...|++.|++.|++|+.+++|+++..++ +.|++|++.+. .+| .+.+++|+.||.|+|+.+
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~---~tg-------~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDL---LTD-------EVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTC-------CEEEEEBSCEEECCGGGH
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEc---CCC-------CEEEEEcCEEEECCChhH
Confidence 35677899999999999999999999999999876 67888886431 012 134899999999999984
No 90
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.32 E-value=0.00036 Score=65.02 Aligned_cols=62 Identities=23% Similarity=0.288 Sum_probs=52.0
Q ss_pred ehHHHHHHHHHHHHHC-CcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 11 SLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 11 ~R~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
+|..|.++|.+++++. |++++. ++|+++..++ +.|++|.+.+ |.+++|++||+|+|.++...
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~~-~~v~~i~~~~-~~v~~v~~~~---------------g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLFQ-ATATGLLLEG-NRVVGVRTWE---------------GPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEET-TEEEEEEETT---------------SCCEECSEEEECCTTCSSCE
T ss_pred CHHHHHHHHHHHHHcCCCcEEEE-eEEEEEEEeC-CEEEEEEECC---------------CCEEECCEEEECCCCChhhc
Confidence 5779999999999997 999994 6999998876 6677888764 35799999999999987643
No 91
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=97.29 E-value=3.5e-05 Score=71.73 Aligned_cols=53 Identities=25% Similarity=0.389 Sum_probs=44.3
Q ss_pred EecCCCCCc--ccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccC------C---cccccCCCCCeeEE
Q 013495 364 RLRDPKIPE--LVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC------K---ACDIKDPKQNIKWT 429 (442)
Q Consensus 364 ~v~d~~~c~--~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~C------g---~C~~~cp~~~I~w~ 429 (442)
.+.|.+.|+ .| +.|+.+||.+++++.++ .+ +.+.|..| | .|+.+||++||++.
T Consensus 101 v~id~~~C~~~~C------~~C~~~CP~~Ai~~~~~-~~------~~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~ 164 (214)
T 1h0h_B 101 VLFTPKTKDLEDY------ESVISACPYDVPRKVAE-SN------QMAKCDMCIDRITNGLRPACVTSCPTGAMNFG 164 (214)
T ss_dssp EEECGGGGGCSCH------HHHHHHCTTCCCEECTT-SS------CEECCCTTHHHHTTTCCCHHHHHCSSSCEEEE
T ss_pred EEEeHHHCccccc------cHHHHhcCCCCeEecCC-Cc------ccCcCCCCcchhhcCCChhHHHhcCcccEEEc
Confidence 344789999 98 78999999999998754 11 46789999 6 99999999999875
No 92
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=97.29 E-value=6e-05 Score=78.53 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=45.0
Q ss_pred EecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 013495 364 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 429 (442)
Q Consensus 364 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg---------~C~~~cp~~~I~w~ 429 (442)
.+.|.+.|+.| +.|+.+||.+++++..+ .+ ..+.|+.|+ .|+.+||++||.+.
T Consensus 210 v~id~~kCigC------g~Cv~~CP~~AI~~~~~-~~------~~~kC~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 210 VLIDQDKCRGW------RMCITGCPYKKIYFNWK-SG------KSEKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp EEECTTTCCCC------CCHHHHCTTCCEEEETT-TT------EEEECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred EEECHHHCCCc------hHHHhhCCccceecccC-CC------CcccCcCCCchhhcCCCCceEeeCchhhhhcc
Confidence 34589999998 78999999999998765 12 367899999 99999999999875
No 93
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.28 E-value=0.00085 Score=64.48 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=58.7
Q ss_pred CCEEE--ehHHHHHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCc--ccc----CCCCCccCCCCceEEEEc
Q 013495 6 NGNRK--SLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDM--GIA----KDGSKKENFQRGVELRGR 76 (442)
Q Consensus 6 ~~y~v--~R~~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~--g~~----~~G~~~~~~~~g~~i~Ak 76 (442)
+.|.+ .+..+...|.+++.+ .|++++.+++|.++..++ ++|.+|.+... .++ .+|+ ..+++|+
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g~-------~~~i~ad 181 (284)
T 1rp0_A 110 DTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCMD-------PNVMEAK 181 (284)
T ss_dssp SSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCCC-------CEEEEEE
T ss_pred CCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccccccCccccCc-------eEEEECC
Confidence 34555 678899999999987 699999999999999876 67778876410 000 1121 2689999
Q ss_pred EEEeccCCCCcccHH
Q 013495 77 ITLLAEGCRGSLSEK 91 (442)
Q Consensus 77 ~vI~AdG~~s~lar~ 91 (442)
.||+|+|.+|.++..
T Consensus 182 ~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 182 IVVSSCGHDGPFGAT 196 (284)
T ss_dssp EEEECCCSSSTTTTH
T ss_pred EEEECCCCchHHHHH
Confidence 999999999988664
No 94
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.25 E-value=0.00063 Score=72.18 Aligned_cols=73 Identities=18% Similarity=0.189 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHH
Q 013495 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEK 91 (442)
Q Consensus 12 R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~ 91 (442)
...+.+.|.+++++.||+|+++++|++++.+++|+|+||++.+ .+|+ ..+|+||.||+|+|..+.. ++
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~----~~G~-------~~~i~A~~VVlAtGg~~~~-~~ 321 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG----EYTG-------YYVIKADAVVIAAGGFAKN-NE 321 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE----TTTE-------EEEEECSEEEECCCCCTTC-HH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe----CCCc-------EEEEEcCEEEEeCCCCccC-HH
Confidence 4578899999999999999999999999887547899998763 2331 2479999999999999876 34
Q ss_pred HHHhc
Q 013495 92 LIKNF 96 (442)
Q Consensus 92 l~~~~ 96 (442)
+++++
T Consensus 322 ~~~~~ 326 (572)
T 1d4d_A 322 RVSKY 326 (572)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44444
No 95
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.21 E-value=0.0072 Score=60.82 Aligned_cols=52 Identities=15% Similarity=0.203 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
+...+...+++.| +|+++++|++|..++++ +.|.+.+ |.+++|+.||.|.|.
T Consensus 206 ~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~--v~v~~~~---------------g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 206 SADLVDAMSQEIP-EIRLQTVVTGIDQSGDV--VNVTVKD---------------GHAFQAHSVIVATPM 257 (431)
T ss_dssp THHHHHHHHTTCS-CEESSCCEEEEECSSSS--EEEEETT---------------SCCEEEEEEEECSCG
T ss_pred HHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe--EEEEECC---------------CCEEEeCEEEEecCc
Confidence 4555556667788 99999999999887644 3477753 356999999999994
No 96
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.19 E-value=0.0011 Score=65.55 Aligned_cols=89 Identities=12% Similarity=0.130 Sum_probs=60.8
Q ss_pred CCEEEe--hHHHHHHHHHHHHHC-CcEEecCCeEeEEEEcC--C-C--cEEEEEeCCccccCCCCCccCCCCceEEEE--
Q 013495 6 NGNRKS--LSQLVRWLGGKAEEL-GVEIYPGFAASEILYDA--D-N--KVIGIGTNDMGIAKDGSKKENFQRGVELRG-- 75 (442)
Q Consensus 6 ~~y~v~--R~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~~--~-g--~v~gV~t~~~g~~~~G~~~~~~~~g~~i~A-- 75 (442)
|.|.+. ...+.+.|.+++++. |++++.+++|.+++.++ + | +|.||.+...-+..+|...... .+.+|+|
T Consensus 137 g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~-d~~~I~A~G 215 (326)
T 2gjc_A 137 GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCM-DPNVIELAG 215 (326)
T ss_dssp SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCC-CCEEEEESC
T ss_pred CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceecc-CceEEEEee
Confidence 455554 467888999999985 99999999999999875 3 5 8999987532222333111111 2368999
Q ss_pred -------------cEEEeccCCCCcccHHHHHh
Q 013495 76 -------------RITLLAEGCRGSLSEKLIKN 95 (442)
Q Consensus 76 -------------k~vI~AdG~~s~lar~l~~~ 95 (442)
++||+|+|..|++.+.+.++
T Consensus 216 ~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~ 248 (326)
T 2gjc_A 216 YKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKR 248 (326)
T ss_dssp CCSSSCCCSSTTCCEEEECCCCC--CCSHHHHH
T ss_pred ccccccccccccCCEEEECcCCCchHHHHHHhh
Confidence 99999999999998876443
No 97
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=97.17 E-value=7.9e-05 Score=72.68 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=43.9
Q ss_pred EecCCCCCcccCCCCCccccccccccceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 013495 364 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 429 (442)
Q Consensus 364 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg---------~C~~~cp~~~I~w~ 429 (442)
.+.|.+.|+.| +.|..+||.+++++.+. ++ ....|..|+ .|..+||++||.+.
T Consensus 126 v~id~~~CigC------g~C~~~CP~~ai~~~~~-~~------~~~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~ 187 (294)
T 1kqf_B 126 VDFQSENCIGC------GYCIAGCPFNIPRLNKE-DN------RVYKCTLCVDRVSVGQEPACVKTCPTGAIHFG 187 (294)
T ss_dssp EEECGGGCCCC------CHHHHHCTTCCCEEETT-TT------EEECCCTTHHHHTTTCCCHHHHHCTTSCEEEE
T ss_pred eEeCcccCCCc------chhhhcCCCCCcEecCC-CC------CeeeCCCccchhhcCccHHHHHhCCcCcEEEe
Confidence 34488999998 78999999999998764 22 235899998 99999999999875
No 98
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.17 E-value=0.0008 Score=70.20 Aligned_cols=70 Identities=29% Similarity=0.379 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEE-cEEEeccCCCCcccHHH
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGSLSEKL 92 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~A-k~vI~AdG~~s~lar~l 92 (442)
.+.+.|.++|++.|++|+++++|++++.+++|+|+||++.+ +|+ ..+|+| |.||+|+|..+.- +++
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~-------~~~i~A~k~VVlAtGG~~~n-~~m 269 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGK-------EVAVRARRGVVLATGSFAYN-DKM 269 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTE-------EEEEEEEEEEEECCCCCTTC-HHH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCc-------EEEEEeCCeEEEeCCChhhC-HHH
Confidence 89999999999999999999999999998668999998763 221 247999 5999999999864 334
Q ss_pred HHhc
Q 013495 93 IKNF 96 (442)
Q Consensus 93 ~~~~ 96 (442)
++++
T Consensus 270 ~~~~ 273 (510)
T 4at0_A 270 IEAH 273 (510)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 3433
No 99
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.16 E-value=0.00082 Score=71.15 Aligned_cols=67 Identities=18% Similarity=0.124 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 12 R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
...+.+.|.+++++.||+|+++++|++++.+++|+|+||++.+ .+|+ ..+|+|+.||+|+|..|...
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~----~~g~-------~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG----MYKG-------YYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE----TTTE-------EEEEECSEEEECCCCCTTCH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe----CCCc-------EEEEECCeEEEeCCCcccCH
Confidence 4688999999999999999999999999987658899988763 2331 14799999999999998753
No 100
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.12 E-value=0.0014 Score=64.65 Aligned_cols=63 Identities=19% Similarity=0.193 Sum_probs=52.9
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
....++..++.+.|.+.|++.|++|+.+++|+++..++++ +.|++.+ + +++|+.||+|+|..
T Consensus 142 ~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~---------------g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 142 DSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETAD---------------G-EYQAKKAIVCAGTW 203 (372)
T ss_dssp SCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESS---------------C-EEEEEEEEECCGGG
T ss_pred CCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECC---------------C-eEEcCEEEEcCCcc
Confidence 3456788899999999999999999999999999987643 4577653 3 59999999999987
Q ss_pred C
Q 013495 86 G 86 (442)
Q Consensus 86 s 86 (442)
+
T Consensus 204 s 204 (372)
T 2uzz_A 204 V 204 (372)
T ss_dssp G
T ss_pred H
Confidence 5
No 101
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=97.04 E-value=0.00025 Score=75.99 Aligned_cols=61 Identities=20% Similarity=0.222 Sum_probs=46.7
Q ss_pred CCeEecCCCCCcc--cCCCCCcccccccccc-----ceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeE
Q 013495 361 AHLRLRDPKIPEL--VNLPEYAGPESRYCPA-----RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKW 428 (442)
Q Consensus 361 ~Hl~v~d~~~c~~--~~~~~~~~~c~~~CPa-----~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w 428 (442)
..|-|.|.+.|.- |+ .--|.++||. .|+++.++ ++ +..|..+-|+.||.|..+||+.+|+-
T Consensus 19 ~~~~~~~~~~c~p~~c~----~~~c~~~cp~~~~~~~~~~~~~~-~~--~~~i~e~~c~gc~~~~~~~p~~~i~i 86 (607)
T 3bk7_A 19 MRIAVIDYDKCNPDKCG----HFLCERVCPVNRMGGEAIIIDEE-NY--KPIIQEASCTGCGICVHKCPFNAISI 86 (607)
T ss_dssp EEEEECCGGGCCTTTSS----SCHHHHHCHHHHTTCCSEEEETT-TT--EEEECTTTCCCCCHHHHHCSSCCCEE
T ss_pred ceEEEeeccccCCCCCC----hhhHhhhCCCCcCCceEEEEcCC-CC--cceeeecccCccccccCCCCcceEEE
Confidence 3466777776653 42 1479999995 37888765 23 89999999999999999999988765
No 102
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.00 E-value=0.0018 Score=71.69 Aligned_cols=74 Identities=22% Similarity=0.272 Sum_probs=61.1
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
....++...+.+.|++.|++.|++|+.+++|+++..++ +.+++|++.+ | +++|+.||.|+|..
T Consensus 144 ~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~---------------G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 144 SDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTAD---------------G-VIPADIVVSCAGFW 206 (830)
T ss_dssp TCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------E-EEECSEEEECCGGG
T ss_pred CCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECC---------------c-EEECCEEEECCccc
Confidence 34567889999999999999999999999999999876 6677888763 3 79999999999998
Q ss_pred CcccHHHHHhcCCc
Q 013495 86 GSLSEKLIKNFKLR 99 (442)
Q Consensus 86 s~lar~l~~~~gl~ 99 (442)
| ..+.+.+|++
T Consensus 207 s---~~l~~~~g~~ 217 (830)
T 1pj5_A 207 G---AKIGAMIGMA 217 (830)
T ss_dssp H---HHHHHTTTCC
T ss_pred h---HHHHHHhCCC
Confidence 5 4444455664
No 103
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.97 E-value=0.036 Score=56.92 Aligned_cols=56 Identities=16% Similarity=0.206 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHCC-cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 13 SQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
..+-+.|++.+++.| ++|+.+++|++|..++++ +.|++.+ |.+++|+.||.|.|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~---------------g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARD---------------GREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETT---------------CCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECC---------------CCEEEcCEEEECCCHH
Confidence 467788888888899 999999999999987643 4576653 4579999999999975
No 104
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=96.92 E-value=0.00027 Score=67.90 Aligned_cols=44 Identities=20% Similarity=0.363 Sum_probs=36.9
Q ss_pred cccccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 381 GPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 381 ~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
+.|...||.+++.++++ . .+.+|..+|+.||.|..+|| ++|...
T Consensus 177 ~~C~~~CP~g~I~id~~---~-~v~~d~~~C~~C~~C~~vCp-~aI~~~ 220 (265)
T 2pa8_D 177 EKAVNVCPEGVFELKDG---K-LSVKNELSCTLCEECLRYCN-GSIRIS 220 (265)
T ss_dssp TTHHHHCTTCCEEEETT---E-EEESCGGGCCCCCHHHHHHT-TSEEEE
T ss_pred HHHHHhCcccCeEecCC---e-eEEeccccCCCchHHHHhCC-CceEEE
Confidence 68999999999999764 1 35568899999999999999 898643
No 105
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.91 E-value=0.00061 Score=61.71 Aligned_cols=37 Identities=22% Similarity=-0.043 Sum_probs=33.3
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
..+|++|+|||+ .+.||+.||.||+.||++|.++|+.
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999984 4789999999999999999999975
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.85 E-value=0.002 Score=65.70 Aligned_cols=59 Identities=20% Similarity=0.297 Sum_probs=50.6
Q ss_pred ehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 11 ~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
++..+.+.|.+++++.||+|+.+++|+++..++++ +.|++.+ + +++|+.||+|+|..|.
T Consensus 130 ~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~--~~V~~~~---------------g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 130 SAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG--FRVTTSA---------------G-TVDAASLVVASGGKSI 188 (417)
T ss_dssp CHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE--EEEEETT---------------E-EEEESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE--EEEEECC---------------c-EEEeeEEEECCCCccC
Confidence 45689999999999999999999999999887633 5677763 4 8999999999999983
No 107
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.83 E-value=0.0029 Score=64.68 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.|-+.|++.+++.|++|+++++|++|..++++ ++.|.+. +.+++|+.||.|.+..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~----------------~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLR----------------DSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECS----------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEEC----------------CeEEEcCEEEECCCHH
Confidence 68889999999999999999999999987644 4567654 2479999999998764
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.79 E-value=0.0012 Score=68.78 Aligned_cols=72 Identities=18% Similarity=0.024 Sum_probs=56.0
Q ss_pred EEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcC-CCcEEEEEeCCccccC-CCCCccCCCCceEEEEcEEEeccCCC
Q 013495 8 NRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAK-DGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~-~g~v~gV~t~~~g~~~-~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.+++.+|.+.|.+.+++.|++|+.+++|+++..++ ++.+++|.+.+ . +|+ ..+++|++||+|+|.+
T Consensus 161 ~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~----~~~g~-------~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 161 DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQP----NPPAQ-------LASYEFDVLISAAGGK 229 (497)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEES----CCCHH-------HHTCCBSEEEECCCTT
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEE----CCCCC-------EEEEEcCEEEECCCCC
Confidence 358889999999999999999999999999998752 23445676632 1 121 1468999999999999
Q ss_pred CcccH
Q 013495 86 GSLSE 90 (442)
Q Consensus 86 s~lar 90 (442)
|.+.+
T Consensus 230 S~~r~ 234 (497)
T 2bry_A 230 FVPEG 234 (497)
T ss_dssp CCCTT
T ss_pred ccccc
Confidence 98854
No 109
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.76 E-value=0.017 Score=58.51 Aligned_cols=53 Identities=11% Similarity=0.265 Sum_probs=38.4
Q ss_pred HHHHHHHHHCC-cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 17 RWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 17 ~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.....-++.++ ++|+.+++|++|..++++ +.|++.+ |.+++|+.||.|.....
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~--~~v~~~~---------------g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSC--YSLELDN---------------GVTLDADSVIVTAPHKA 289 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSS--EEEEESS---------------SCEEEESEEEECSCHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCe--EEEEECC---------------CCEEECCEEEECCCHHH
Confidence 33333344444 799999999999988744 4677764 45799999999998753
No 110
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.66 E-value=0.0041 Score=66.18 Aligned_cols=66 Identities=23% Similarity=0.330 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+.+.|.+++++.|++|+.++.|++++.+++|+|+||.+.+. .+|+ ..+|+|+.||+|+|..+.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~-------~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCI---ETGE-------VVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEET---TTCC-------EEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCe-------EEEEEcCEEEECCCCCccc
Confidence 4788899999999999999999999999874588999986421 1232 2479999999999998754
No 111
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.54 E-value=0.0054 Score=62.01 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=49.3
Q ss_pred ehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcC---CCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 11 SLSQLVRWLGGKAEELGVEIYPGFAASEILYDA---DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 11 ~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~---~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
++..+.+.|.+++++.||+|+.+++|+++..++ ++. +.|++.+ + +++|+.||+|+|..|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~---------------g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNS---------------T-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETT---------------E-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECC---------------C-EEECCEEEECCCCcc
Confidence 577888999999999999999999999998762 133 4676653 3 799999999999998
No 112
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.53 E-value=0.0044 Score=64.30 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
..+-+.|++.+++.|++|+.+++|.+|..+++|+++||++.+ |.+++|+.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 578899999999999999999999999995558899999874 4689999999999876
No 113
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.51 E-value=0.0059 Score=65.61 Aligned_cols=63 Identities=16% Similarity=0.255 Sum_probs=53.5
Q ss_pred EEEehHHHHHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 8 NRKSLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+.++|..+.+.|.+.+++ .|++|+. +.|+++..++ +.|++|.+.+ |.+++|+.||+|+|.++
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I~~-~~V~~L~~e~-g~V~GV~t~d---------------G~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMIFQ-QAVEDLIVEN-DRVVGAVTQM---------------GLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEESS-SBEEEEEETT---------------SEEEEEEEEEECCSTTT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEEE-EEEEEEEecC-CEEEEEEECC---------------CCEEECCEEEEcCCCCc
Confidence 368899999999999998 6999964 6899998875 7788998864 46899999999999975
Q ss_pred c
Q 013495 87 S 87 (442)
Q Consensus 87 ~ 87 (442)
.
T Consensus 182 ~ 182 (651)
T 3ces_A 182 D 182 (651)
T ss_dssp C
T ss_pred c
Confidence 3
No 114
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.47 E-value=0.0066 Score=59.74 Aligned_cols=51 Identities=10% Similarity=0.118 Sum_probs=41.8
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.++...|.++|+++|++.|++|+. ++|+++..+ . + +|+.||.|+|..|
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------~-----------------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 136 TLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------F-----------------D-GADLVVNATGLGA 185 (363)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------C-----------------S-SCSEEEECCGGGG
T ss_pred cceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------C-----------------c-CCCEEEECCCcch
Confidence 46789999999999999999999998 888766321 0 1 5899999999986
Q ss_pred c
Q 013495 87 S 87 (442)
Q Consensus 87 ~ 87 (442)
.
T Consensus 186 ~ 186 (363)
T 1c0p_A 186 K 186 (363)
T ss_dssp G
T ss_pred h
Confidence 4
No 115
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.38 E-value=0.0068 Score=64.94 Aligned_cols=62 Identities=19% Similarity=0.276 Sum_probs=53.0
Q ss_pred EEEehHHHHHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 8 NRKSLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+.++|..|.+.|.+.+++ .|++|+ ...|+++..++ +.|+||.+.+ |.+++|+.||+|+|..+
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~-g~V~GV~t~d---------------G~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKN-NQVVGVRTNL---------------GVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS-SBEEEEEETT---------------SCEEECSEEEECCTTCB
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC-CEEEEEEECC---------------CcEEEeCEEEEccCCCc
Confidence 367899999999999998 599996 56899998876 7788999864 46899999999999864
No 116
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.27 E-value=0.0069 Score=64.91 Aligned_cols=64 Identities=20% Similarity=0.322 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+.+.|.+++++.|++|+.++.|++++.++ |+|.||.+.++ .+|+ -..|+|+.||+|+|..+.+
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~---~~G~-------~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCI---EDGT-------IHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEEEEEEEEc---CCCc-------EEEEEcCeEEECCCccccc
Confidence 788999999999999999999999999875 88999987531 2332 1479999999999998754
No 117
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.26 E-value=0.0099 Score=63.77 Aligned_cols=62 Identities=11% Similarity=0.191 Sum_probs=52.4
Q ss_pred EEEehHHHHHHHHHHHHHC-CcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 8 NRKSLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+.++|..|.+.|.+.+++. |++|+.+ .|+++..++ +.|.||.+.+ |.+++|+.||+|+|.++
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~-g~V~GV~t~~---------------G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANS-GKFSSVTVRS---------------GRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEET-TEEEEEEETT---------------SCEEEEEEEEECCTTCB
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecC-CEEEEEEECC---------------CcEEEeCEEEECcCCCC
Confidence 4789999999999999984 9999865 899998876 6788898864 46899999999999873
No 118
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.26 E-value=0.15 Score=52.76 Aligned_cols=58 Identities=10% Similarity=-0.084 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 12 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 12 R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+.-+.+.....+++.|++|+.+++|++|..++ +.|. |++.+ |.+++||.||.|.+...
T Consensus 211 ~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~-~~v~-v~~~~---------------g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 211 VGGSGQVSERIMDLLGDRVKLERPVIYIDQTR-ENVL-VETLN---------------HEMYEAKYVISAIPPTL 268 (520)
T ss_dssp TTCTHHHHHHHHHHHGGGEESSCCEEEEECSS-SSEE-EEETT---------------SCEEEESEEEECSCGGG
T ss_pred eCCHHHHHHHHHHHcCCcEEcCCeeEEEEECC-CeEE-EEECC---------------CeEEEeCEEEECCCHHH
Confidence 33344444445566799999999999998876 4444 77654 46899999999999864
No 119
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.21 E-value=0.011 Score=59.38 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+-+.|++.+++.|++|+++++|++|..++ +++++|++. +.+++|+.||.|.|+...
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~----------------g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIAD----------------DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEET----------------TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEEC----------------CEEEECCEEEECCCHHHH
Confidence 5688889999999999999999999999886 678888875 368999999999998644
No 120
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.21 E-value=0.0098 Score=57.55 Aligned_cols=62 Identities=8% Similarity=0.168 Sum_probs=51.0
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+|..+.++|.+.+++.|++++.+++|+++..++ +.+.+|.+.+ + +++++.||+|+|.++.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~---------------g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDG---------------R-QWLARAVISATGTWGE 133 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTS---------------C-EEEEEEEEECCCSGGG
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCC---------------C-EEEeCEEEECCCCCCC
Confidence 35678999999999999999999999999998876 3333377653 3 8999999999998653
No 121
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=96.02 E-value=0.0044 Score=44.12 Aligned_cols=26 Identities=19% Similarity=0.549 Sum_probs=22.7
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
++.+|.++|++||.|..+|| .+|.+.
T Consensus 1 ~i~i~~~~C~~C~~C~~~Cp-~~~~~~ 26 (59)
T 1dwl_A 1 TIVIDHEECIGCESCVELCP-EVFAMI 26 (59)
T ss_dssp CEEESSCCCSSCCGGGGTST-TTEEEE
T ss_pred CeEEChhhCcChhHHHHHCC-HHheec
Confidence 37889999999999999999 588773
No 122
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=95.99 E-value=0.0039 Score=48.26 Aligned_cols=25 Identities=20% Similarity=0.602 Sum_probs=22.6
Q ss_pred EEecCCCccCCcccccCCCCCeeEE
Q 013495 405 QINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 405 ~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.++.+.|++||.|..+||+++|++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQG 26 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEEC
T ss_pred eEeCCCCcCccchHHHCChhheEcC
Confidence 4788999999999999999999873
No 123
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=95.96 E-value=0.0027 Score=51.14 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=26.1
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEEC
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWTV 430 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~ 430 (442)
++.+|.++|++||.|..+||.++|.+..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~ 64 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYD 64 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEE
T ss_pred eEEEehhhCCChhhHHHHcCccCeeccc
Confidence 6899999999999999999999999864
No 124
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.94 E-value=0.013 Score=63.20 Aligned_cols=64 Identities=22% Similarity=0.284 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+.+.|.+++++.|++|+.++.|++++.++ |+|+||.+.+. .+|+ -..|+|+.||+|+|..+.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~---~~G~-------~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDL---VTGD-------IIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEEC---CCCc-------EEEEEcCEEEEccCcchhh
Confidence 688899999999999999999999999865 78889876421 1232 1469999999999998754
No 125
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.92 E-value=0.01 Score=63.37 Aligned_cols=66 Identities=20% Similarity=0.314 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHCC-cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 13 SQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
..+.+.|.+++++.| ++|+.++.|++++.++ ++|+||.+.+. .+|+ ..+|+|+.||+|+|..|.+-
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~---~~G~-------~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNM---MEGT-------LVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEET---TTTE-------EEEEECSCEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEc---CCCc-------EEEEEcCeEEECCCCCcccc
Confidence 478899999999999 9999999999999875 78888865321 1231 13799999999999998763
No 126
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.89 E-value=0.02 Score=57.44 Aligned_cols=69 Identities=17% Similarity=0.336 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l 92 (442)
..+-++|.+..++.|++++++++|.++..++ +++.+|++.+ |.++.|+.||.|.|..... .+
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~d---------------G~~i~aD~Vv~a~G~~p~~--~l 245 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSD---------------GNTLPCDLVVVGVGVIPNV--EI 245 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------SCEEECSEEEECCCEEECC--HH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCC---------------CCEEEcCEEEECcCCccCH--HH
Confidence 3567888889999999999999999998765 6788898874 4689999999999997653 24
Q ss_pred HHhcCCc
Q 013495 93 IKNFKLR 99 (442)
Q Consensus 93 ~~~~gl~ 99 (442)
++..|+.
T Consensus 246 ~~~~gl~ 252 (404)
T 3fg2_P 246 AAAAGLP 252 (404)
T ss_dssp HHHTTCC
T ss_pred HHhCCCC
Confidence 4456765
No 127
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.85 E-value=0.11 Score=52.98 Aligned_cols=60 Identities=17% Similarity=0.019 Sum_probs=42.8
Q ss_pred EEEehHHHHHHHHHHHHHCC-cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 8 NRKSLSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+...+.-+..+...-++.++ ++|+.+++|++|..++++ +.|++.+ | +++|+.||.|.+..
T Consensus 228 ~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~--~~v~~~~---------------g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 228 FLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGR--YRLKTDH---------------G-PEYADYVLLTIPHP 288 (475)
T ss_dssp EEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTE--EEEECTT---------------C-CEEESEEEECSCHH
T ss_pred EEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCE--EEEEECC---------------C-eEECCEEEECCCHH
Confidence 44444445555544555555 799999999999987643 4577653 5 79999999999875
No 128
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=95.84 E-value=0.0024 Score=46.68 Aligned_cols=26 Identities=19% Similarity=0.604 Sum_probs=23.4
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
++.+|.++|++||.|..+|| ++|++.
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP-~~~~~~ 28 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAP-GAFAMD 28 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCT-TTEEEC
T ss_pred EEEEccccCCCchHHHHhCC-ccEeEc
Confidence 57899999999999999999 888764
No 129
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.83 E-value=0.028 Score=57.34 Aligned_cols=64 Identities=14% Similarity=0.038 Sum_probs=44.3
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEe---CCccccCCCCCccCCCCceEEEEcEEEecc
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT---NDMGIAKDGSKKENFQRGVELRGRITLLAE 82 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t---~~~g~~~~G~~~~~~~~g~~i~Ak~vI~Ad 82 (442)
+.+...+.-+......-++..|++|+.+++|++|..++++ +.|++ .+ +.+++|+.||.|.
T Consensus 228 ~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~--~~v~~~~~~~---------------g~~~~ad~vV~a~ 290 (478)
T 2ivd_A 228 GALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGG--WRLIIEEHGR---------------RAELSVAQVVLAA 290 (478)
T ss_dssp CCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--C--CEEEEEETTE---------------EEEEECSEEEECS
T ss_pred ccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCe--EEEEEeecCC---------------CceEEcCEEEECC
Confidence 3444445545555555556668999999999999887644 46765 32 4679999999999
Q ss_pred CCCC
Q 013495 83 GCRG 86 (442)
Q Consensus 83 G~~s 86 (442)
+...
T Consensus 291 ~~~~ 294 (478)
T 2ivd_A 291 PAHA 294 (478)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 8753
No 130
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.82 E-value=0.028 Score=56.57 Aligned_cols=69 Identities=20% Similarity=0.270 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l 92 (442)
..+-++|.+..++.|++|+++++|.++..++ +++.+|++.+ |.++.|+.||.|.|..... .+
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~d---------------G~~i~aD~Vv~a~G~~p~~--~l 255 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQD---------------GSVIPADIVIVGIGIVPCV--GA 255 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESS---------------SCEEECSEEEECSCCEESC--HH
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCC---------------CCEEEcCEEEECCCCccCh--HH
Confidence 4677788888999999999999999998765 7788898874 4689999999999998654 23
Q ss_pred HHhcCCc
Q 013495 93 IKNFKLR 99 (442)
Q Consensus 93 ~~~~gl~ 99 (442)
++..|+.
T Consensus 256 ~~~~gl~ 262 (415)
T 3lxd_A 256 LISAGAS 262 (415)
T ss_dssp HHHTTCC
T ss_pred HHhCCCC
Confidence 4455665
No 131
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.81 E-value=0.014 Score=60.33 Aligned_cols=61 Identities=26% Similarity=0.252 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
..+.+.|.+++++.|++|+.++.| +++.++ ++|.||.+.+ . +.+++|+.||+|+|..+.+-
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v~Gv~v~~----~----------~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKVTGFVTEK----R----------GLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEEEEEEETT----T----------EEECCCSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEEEEEEEEe----C----------CCeEEeeeEEECCCCCcccC
Confidence 477889999998899999999999 998875 7788887642 1 23577999999999998653
No 132
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.0025 Score=62.20 Aligned_cols=43 Identities=19% Similarity=0.049 Sum_probs=36.4
Q ss_pred cccCCEEEEccCCCcccCcccccH--HHHHHHHHHHHHHHHhhhc
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGT--HTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI--~~Am~SG~lAAeai~~al~ 255 (442)
..-||++++||||+.++++...|. .-+|.||+.|||+|.+.|+
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 346899999999999999988883 2357899999999998874
No 133
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=95.76 E-value=0.0041 Score=47.44 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=25.0
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEEC
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWTV 430 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~~ 430 (442)
++.++.++|++||.|..+||.++|++..
T Consensus 2 ~~~~~~~~C~~Cg~C~~~CP~~a~~~~~ 29 (80)
T 1jb0_C 2 HTVKIYDTCIGCTQCVRACPTDVLEMVP 29 (80)
T ss_dssp CEEEEETTCCCCCHHHHHCTTCCCEEEE
T ss_pred CCcccCCcCcChhHHHHHCCcccccccc
Confidence 4678899999999999999999998764
No 134
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.76 E-value=0.026 Score=59.31 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=55.1
Q ss_pred EEEehHHHHHHHHHHHHHCCc--EEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 8 NRKSLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gv--ei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
..+++.++.++|.+.+++.|+ +|+.+++|+++.+++++..+.|.+.+ |.+++|++||+|+|..
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~---------------G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH---------------GEVYRAKYVVNAVGLL 146 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT---------------SCEEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC---------------CCEEEeCEEEECCccc
Confidence 357889999999999999998 89999999999988765567787764 4589999999999986
Q ss_pred Cc
Q 013495 86 GS 87 (442)
Q Consensus 86 s~ 87 (442)
|.
T Consensus 147 s~ 148 (540)
T 3gwf_A 147 SA 148 (540)
T ss_dssp CS
T ss_pred cc
Confidence 53
No 135
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.76 E-value=0.0075 Score=63.48 Aligned_cols=65 Identities=14% Similarity=0.158 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHH-CCcEEecCCeEeEEEEcCCC------cEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 14 QLVRWLGGKAEE-LGVEIYPGFAASEILYDADN------KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 14 ~fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g------~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+.+.|.+++++ .|++|+.++.|++++.++++ +|+||.+.+. ++|+ ..+|+|+.||+|+|..|
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~---~~G~-------~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNR---NKET-------VETCHAKAVVLATGGAS 208 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEET---TTTE-------EEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEc---CCCc-------EEEEEcCeEEECCCCcc
Confidence 567788899998 79999999999999984435 8889987531 1231 14799999999999998
Q ss_pred cc
Q 013495 87 SL 88 (442)
Q Consensus 87 ~l 88 (442)
.+
T Consensus 209 ~~ 210 (540)
T 1chu_A 209 KV 210 (540)
T ss_dssp GG
T ss_pred cc
Confidence 65
No 136
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=95.65 E-value=0.0043 Score=47.84 Aligned_cols=26 Identities=19% Similarity=0.613 Sum_probs=23.4
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
++.||.++|++||.|..+|| +++.+.
T Consensus 3 ~v~vd~~~CigCg~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCT-TTEEEC
T ss_pred EEEEecccCcccChhhHhCc-hheeeC
Confidence 68999999999999999999 787764
No 137
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.61 E-value=0.035 Score=54.33 Aligned_cols=65 Identities=22% Similarity=0.169 Sum_probs=52.8
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
+++.++.++|.+.+++.|++++.+++|+++..++++. +.|.+.+ +.+++++.||+|+|.++...
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~---------------g~~~~~~~li~AtG~~~~~~ 134 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGT-FETRTNT---------------GNVYRSRAVLIAAGLGAFEP 134 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSC-EEEEETT---------------SCEEEEEEEEECCTTCSCCB
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCce-EEEEECC---------------CcEEEeeEEEEccCCCcCCC
Confidence 5778999999999999999999999999998875433 4566653 45899999999999976544
Q ss_pred H
Q 013495 90 E 90 (442)
Q Consensus 90 r 90 (442)
+
T Consensus 135 ~ 135 (360)
T 3ab1_A 135 R 135 (360)
T ss_dssp C
T ss_pred C
Confidence 3
No 138
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=95.58 E-value=0.03 Score=58.40 Aligned_cols=70 Identities=24% Similarity=0.311 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcE--EEEEeCCccccCCCCCccCCCCce-EEEEcEEEeccCCCCcccH
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKV--IGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGSLSE 90 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v--~gV~t~~~g~~~~G~~~~~~~~g~-~i~Ak~vI~AdG~~s~lar 90 (442)
.+.+.|.+..++.|++|+++++|.++..++++.| +.|++.+ |. ++.|+.||.|.|.+.....
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~---------------G~~~i~aD~Vv~A~G~~p~~~~ 320 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPN---------------GEMRIETDFVFLGLGEQPRSAE 320 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETT---------------EEEEEECSCEEECCCCEECCHH
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECC---------------CcEEEEcCEEEECcCCccCCcc
Confidence 5667888889999999999999999987655655 4566543 34 7999999999999887643
Q ss_pred HHHHhcCCc
Q 013495 91 KLIKNFKLR 99 (442)
Q Consensus 91 ~l~~~~gl~ 99 (442)
+++..|+.
T Consensus 321 -~l~~~gl~ 328 (523)
T 1mo9_A 321 -LAKILGLD 328 (523)
T ss_dssp -HHHHHTCC
T ss_pred -CHHHcCCc
Confidence 44555664
No 139
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=95.58 E-value=0.0055 Score=47.71 Aligned_cols=25 Identities=20% Similarity=0.660 Sum_probs=22.2
Q ss_pred EEecCCCccCCcccccCCCCCeeEE
Q 013495 405 QINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 405 ~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.++.+.|++||.|..+||+++|.+.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMG 26 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECC
T ss_pred EEeCCcCcChhHHHHHCchhccCcC
Confidence 3678999999999999999999864
No 140
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.56 E-value=0.013 Score=63.35 Aligned_cols=68 Identities=12% Similarity=0.115 Sum_probs=54.5
Q ss_pred ehHHHHHHHHHHHHHC--CcEEecCCeEeEEEEcCC--CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 11 SLSQLVRWLGGKAEEL--GVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 11 ~R~~fd~~L~~~Ae~~--Gvei~~g~~v~~i~~~~~--g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.-..+.+.|.+++++. |++|+.++.|++++.+++ |+|+||.+.+. ++|+ ...|+|+.||+|+|..+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANE-------VHIFKANAMVVACGGAV 233 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCc-------EEEEEeCEEEECCCccc
Confidence 3457888999999998 999999999999999874 49999976431 2332 25799999999999987
Q ss_pred cc
Q 013495 87 SL 88 (442)
Q Consensus 87 ~l 88 (442)
.+
T Consensus 234 ~~ 235 (662)
T 3gyx_A 234 NV 235 (662)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 141
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=95.55 E-value=0.0054 Score=44.72 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=23.4
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
++.+|.++|++||.|..+||. +|.+.
T Consensus 3 ~~~id~~~C~~C~~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 3 KVSVDQDTCIGDAICASLCPD-VFEMN 28 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTT-TEEEC
T ss_pred EEEECcccCcCchHHHHhCCc-eEEEC
Confidence 688999999999999999995 88774
No 142
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.52 E-value=0.056 Score=52.70 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=42.0
Q ss_pred CEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 7 GNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 7 ~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+++++-.+|.++|+++|++.|++|+. ++|+++..+ ..++|+.||.|+|.+|
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~----------------------------~~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEV----------------------------AREGADVIVNCTGVWA 186 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH----------------------------HHTTCSEEEECCGGGG
T ss_pred ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh----------------------------hcCCCCEEEECCCcCh
Confidence 36789999999999999999999998 777665221 1256999999999986
Q ss_pred c
Q 013495 87 S 87 (442)
Q Consensus 87 ~ 87 (442)
.
T Consensus 187 ~ 187 (351)
T 3g3e_A 187 G 187 (351)
T ss_dssp G
T ss_pred H
Confidence 4
No 143
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=95.49 E-value=0.0054 Score=47.34 Aligned_cols=24 Identities=21% Similarity=0.603 Sum_probs=21.7
Q ss_pred EecCCCccCCcccccCCCCCeeEE
Q 013495 406 INAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 406 i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
++.+.|++||.|..+||+++|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQG 26 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEEC
T ss_pred eeCCCCCChhhHHHHCChhccCCC
Confidence 577899999999999999999874
No 144
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.38 E-value=0.024 Score=60.90 Aligned_cols=66 Identities=21% Similarity=0.237 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHC-Cc-EEecCCeEeEEEEcCC--CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEEL-GV-EIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~-Gv-ei~~g~~v~~i~~~~~--g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+.+.|.+.+++. || +|+.++.|++++.+++ |+|+||.+.+. .+|+ ..+|+|+.||+|+|..+.+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~---~~g~-------~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSV---REPK-------FYVFKAKAVILATGGATLL 220 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEe---cCCc-------EEEEEcCEEEECCCccccc
Confidence 45788999999988 99 9999999999998763 28999876321 2231 2479999999999998864
No 145
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=95.36 E-value=0.005 Score=47.29 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=21.5
Q ss_pred EecCCCccCCcccccCCCCCeeEE
Q 013495 406 INAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 406 i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
++.++|++||.|..+||+++|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPG 26 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECC
T ss_pred EeCCCCcChhhHHHHcChhccCcC
Confidence 567899999999999999999864
No 146
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=95.32 E-value=0.0085 Score=42.34 Aligned_cols=25 Identities=28% Similarity=0.615 Sum_probs=21.6
Q ss_pred EEEecCCCccCCcccccCCCCCeeEE
Q 013495 404 LQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 404 ~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
+.| .++|++||.|..+||.++|++.
T Consensus 2 ~~i-~~~C~~C~~C~~~CP~~ai~~~ 26 (55)
T 2fdn_A 2 YVI-NEACISCGACEPECPVNAISSG 26 (55)
T ss_dssp EEE-CTTCCCCCTTGGGCTTCCEECC
T ss_pred eEe-cccCcChhhHHHHCCccccCcC
Confidence 445 7899999999999999998764
No 147
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=95.25 E-value=0.024 Score=58.05 Aligned_cols=65 Identities=12% Similarity=0.102 Sum_probs=53.2
Q ss_pred CCEEEeh---HHHHHHHHHHHHHCCcEEecCCeEeEEEEcC-CCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEec
Q 013495 6 NGNRKSL---SQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 81 (442)
Q Consensus 6 ~~y~v~R---~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~-~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~A 81 (442)
+.|...+ ..+-+.|++.+++.|++|+.+++|++|..+. ++++++|++. |.+++|+.||.|
T Consensus 232 ~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a 295 (453)
T 2bcg_G 232 SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIAD 295 (453)
T ss_dssp CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEEC
T ss_pred CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEEC
Confidence 4454444 4788999999999999999999999999872 3778888874 368999999999
Q ss_pred cCCCC
Q 013495 82 EGCRG 86 (442)
Q Consensus 82 dG~~s 86 (442)
.|..+
T Consensus 296 ~~~~~ 300 (453)
T 2bcg_G 296 PTYFP 300 (453)
T ss_dssp GGGCG
T ss_pred CCccc
Confidence 99874
No 148
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.13 E-value=0.02 Score=58.20 Aligned_cols=58 Identities=14% Similarity=0.183 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+-+.|++.+++.|++|+.+++|++|..++ +++++|++. |.+++|+.||.|.|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~~----------------g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKSE----------------GEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEET----------------TEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEEC----------------CeEEECCEEEECCCCCcc
Confidence 5888899999999999999999999999876 778888753 468999999999999854
No 149
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=95.13 E-value=0.0018 Score=60.74 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=36.5
Q ss_pred cCCCCCcccCCCCCccccccccccceEEE---------------ecCC-CCc--eeEE-----EecCCCccCCcccccCC
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYEY---------------VPDE-KNQ--LKLQ-----INAQNCLHCKACDIKDP 422 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~---------------~~~~-~~~--~~~~-----i~~~~Ci~Cg~C~~~cp 422 (442)
.+.+.|+.| +.|+.+||...... ..+. +.. .++. .+...|+.||.|..+||
T Consensus 144 ~~~~~Ci~C------g~C~~~CP~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP 217 (238)
T 2wdq_B 144 DGLYECILC------ACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCP 217 (238)
T ss_dssp TTTTTCCCC------CTTGGGCHHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCT
T ss_pred hcccccccc------CCchhhCcCCccCCCCCCCHHHHHHHHHHHhCCcccchHHHHHHHhccCCCCcCcccchhhhhcC
Confidence 468999999 79999999876321 0010 000 0110 25679999999999999
Q ss_pred CCC
Q 013495 423 KQN 425 (442)
Q Consensus 423 ~~~ 425 (442)
.++
T Consensus 218 ~gi 220 (238)
T 2wdq_B 218 KGL 220 (238)
T ss_dssp TCC
T ss_pred CCC
Confidence 876
No 150
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.09 E-value=0.062 Score=57.71 Aligned_cols=61 Identities=8% Similarity=0.024 Sum_probs=51.6
Q ss_pred CCEEEe---hHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCC-CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEec
Q 013495 6 NGNRKS---LSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLA 81 (442)
Q Consensus 6 ~~y~v~---R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~-g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~A 81 (442)
++|... ...+-+.|.+.+++.|++|+.+++|.+|+.+++ |+++||++.+ |.+++|+.||.+
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---------------Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---------------GQRIISKHFIIE 432 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---------------SCEEECSEEEEE
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---------------CCEEEcCEEEEC
Confidence 456666 668999999999999999999999999998765 7899998643 468999999973
No 151
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.94 E-value=0.056 Score=56.61 Aligned_cols=64 Identities=19% Similarity=0.282 Sum_probs=51.8
Q ss_pred EEehHHHHHHHHHHHHHCC--cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 9 RKSLSQLVRWLGGKAEELG--VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~G--vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+++.++.++|.+.|++.+ ++|+.+++|.++.+++++..+.|++.+ |.+++|++||.|+|..|
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------------G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH---------------GDRIRARYLIMASGQLS 154 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT---------------CCEEEEEEEEECCCSCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC---------------CCEEEeCEEEECcCCCC
Confidence 3567889999999898876 789999999999987654456677753 45799999999999875
Q ss_pred c
Q 013495 87 S 87 (442)
Q Consensus 87 ~ 87 (442)
.
T Consensus 155 ~ 155 (542)
T 1w4x_A 155 V 155 (542)
T ss_dssp C
T ss_pred C
Confidence 4
No 152
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.89 E-value=0.046 Score=57.52 Aligned_cols=63 Identities=16% Similarity=0.252 Sum_probs=53.4
Q ss_pred EEehHHHHHHHHHHHHHCCc--EEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 9 RKSLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gv--ei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
..++.++.++|.+.+++.|+ +++.+++|+++.+++++..+.|++.+ |.+++|++||.|+|..|
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~---------------G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR---------------GDEVSARFLVVAAGPLS 159 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT---------------CCEEEEEEEEECCCSEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC---------------CCEEEeCEEEECcCCCC
Confidence 45788999999999999998 89999999999988765567788764 46799999999999753
No 153
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=94.80 E-value=0.0085 Score=42.72 Aligned_cols=25 Identities=24% Similarity=0.693 Sum_probs=21.6
Q ss_pred eEEEecCCCccCCcccccCCCCCeeE
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKW 428 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w 428 (442)
++.+|.++|++||.|..+||. +|.+
T Consensus 2 ~~~i~~~~C~~C~~C~~~Cp~-~~~~ 26 (60)
T 1rof_A 2 KVRVDADACIGCGVCENLCPD-VFQL 26 (60)
T ss_dssp CSEECTTTCCSCCSSTTTCTT-TBCC
T ss_pred EEEEchhhCCCChHHHHhCcH-HHeE
Confidence 467899999999999999996 7654
No 154
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.76 E-value=0.058 Score=51.31 Aligned_cols=63 Identities=22% Similarity=0.259 Sum_probs=49.8
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCC-CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~-g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.++..+.++|.+.+++.|++++.+++|..+..+.+ +..+.|.+.+ +.+++++.||+|+|.++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~---------------g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS---------------GAVLKARSIIVATGAKWR 116 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC---------------CCEEEeCEEEECcCCCcC
Confidence 46788999999999999999999999999976532 2234566653 357999999999998654
No 155
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.70 E-value=0.082 Score=50.86 Aligned_cols=64 Identities=16% Similarity=0.167 Sum_probs=51.2
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
+++.++.++|.+.+++.|++++.+++|.++..+++ .+.|.+.+ +.+++++.||+|+|.++...
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~~~---------------g~~~~~~~lv~AtG~~~~~p 124 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVTTSQ---------------GNAYTAKAVIIAAGVGAFEP 124 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEEETT---------------SCEEEEEEEEECCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEEECC---------------CCEEEeCEEEECCCCCCCCC
Confidence 56788999999999999999999999999988753 34566543 35799999999999976443
Q ss_pred H
Q 013495 90 E 90 (442)
Q Consensus 90 r 90 (442)
+
T Consensus 125 ~ 125 (335)
T 2zbw_A 125 R 125 (335)
T ss_dssp C
T ss_pred C
Confidence 3
No 156
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.70 E-value=0.06 Score=51.82 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=49.0
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+++..|.++|.+.+++.|++++.++ |.++..++++ +.|.+ + +.+++++.||+|+|.++..
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~--~~v~~-~---------------~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKP--FKLFT-D---------------SKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSS--EEEEC-S---------------SEEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE--EEEEE-C---------------CcEEEcCEEEECCCCCcCC
Confidence 36788999999999999999999987 8888776532 34555 3 3689999999999997553
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.67 E-value=0.08 Score=51.62 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=48.7
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+++..+.++|.+.+++.|++++.+++|.++..++++ +.|.+.+ + ++.++.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~---------------g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTT---------------E-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESS---------------C-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCC---------------C-EEEeCEEEECCCCCCc
Confidence 567789999999999999999999999999887533 3465542 2 5899999999999753
No 158
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.65 E-value=0.075 Score=53.90 Aligned_cols=70 Identities=19% Similarity=0.238 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEc-CCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYD-ADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEK 91 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~-~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~ 91 (442)
..+-++|.+..++.|++++++++|.++..+ +++.+.+|.+.+ |.++.++.||.|.|..... .
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~---------------G~~i~~D~Vv~a~G~~p~~--~ 253 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED---------------GTRLPADLVIAGIGLIPNC--E 253 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT---------------SCEEECSEEEECCCEEECC--H
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC---------------CCEEEcCEEEECCCCCcCc--c
Confidence 356678888889999999999999999862 236777888764 4689999999999987553 2
Q ss_pred HHHhcCCc
Q 013495 92 LIKNFKLR 99 (442)
Q Consensus 92 l~~~~gl~ 99 (442)
+++..|+.
T Consensus 254 l~~~~gl~ 261 (431)
T 1q1r_A 254 LASAAGLQ 261 (431)
T ss_dssp HHHHTTCC
T ss_pred hhhccCCC
Confidence 44556765
No 159
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=94.53 E-value=0.0061 Score=43.45 Aligned_cols=23 Identities=26% Similarity=0.736 Sum_probs=20.2
Q ss_pred EEEecCCCccCCcccccCCCCCeeE
Q 013495 404 LQINAQNCLHCKACDIKDPKQNIKW 428 (442)
Q Consensus 404 ~~i~~~~Ci~Cg~C~~~cp~~~I~w 428 (442)
+.+| ++|++||.|..+||. +|.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~-~~~~ 24 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPD-VFEM 24 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTT-TEEE
T ss_pred cEEC-CcCccchHHHHhCCc-cEEE
Confidence 5678 999999999999998 7765
No 160
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.44 E-value=0.062 Score=55.24 Aligned_cols=60 Identities=10% Similarity=0.035 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCc-eEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG-VELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g-~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++++++++|.++..++++.++.|++.+ | .++.++.||.|.|.+...
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~---------------G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND---------------SKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT---------------SCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC---------------CcEEEEcCEEEECCCCCCcc
Confidence 45567777888899999999999999876545456777753 4 589999999999987654
No 161
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.42 E-value=0.12 Score=52.82 Aligned_cols=37 Identities=14% Similarity=-0.089 Sum_probs=31.7
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
.+|+.++|++... .+.|++-|+.||+.||+.|.+.+.
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHHHh
Confidence 4799999998763 578999999999999999987764
No 162
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.41 E-value=0.08 Score=52.55 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l 92 (442)
..+-+.|.+..++.|++++++++|.++..+++ .+.|.+.+ |.++.++.||.|.|.++... +
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~~~v~~~~---------------g~~i~~d~vv~a~G~~p~~~--l 247 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE--GLEAHLSD---------------GEVIPCDLVVSAVGLRPRTE--L 247 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEETT--EEEEEETT---------------SCEEEESEEEECSCEEECCH--H
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC--EEEEEECC---------------CCEEECCEEEECcCCCcCHH--H
Confidence 35667888888999999999999999987653 35676653 46899999999999987642 4
Q ss_pred HHhcCCc
Q 013495 93 IKNFKLR 99 (442)
Q Consensus 93 ~~~~gl~ 99 (442)
++..|+.
T Consensus 248 ~~~~g~~ 254 (384)
T 2v3a_A 248 AFAAGLA 254 (384)
T ss_dssp HHHTTCC
T ss_pred HHHCCCC
Confidence 4455664
No 163
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=94.37 E-value=0.022 Score=43.25 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=22.4
Q ss_pred EEecCCCcc--CCcccccCCCCCeeEE
Q 013495 405 QINAQNCLH--CKACDIKDPKQNIKWT 429 (442)
Q Consensus 405 ~i~~~~Ci~--Cg~C~~~cp~~~I~w~ 429 (442)
.++.++|++ ||.|..+||.++|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~ 28 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEG 28 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEEC
T ss_pred EEeCccCCCCCcchhHHhcccccEEeC
Confidence 467899999 9999999999999874
No 164
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.36 E-value=0.056 Score=54.17 Aligned_cols=56 Identities=18% Similarity=0.113 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+-+.|++.+++.|++|+++++|++|..++ +.+ |.+. +.+++|+.||.|.|....
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V~~~----------------g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEE-KKV--YTRD----------------NEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--EETT----------------CCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--EEeC----------------CcEEEeCEEEECCCHHHH
Confidence 5788889999999999999999999998765 554 5432 358999999999998743
No 165
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.31 E-value=0.071 Score=50.72 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=49.4
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+++..+.++|.+.+++.|++++. .+|.++..++++ +.|.+.+ +.+++++.||+|+|.++.+
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~~---------------g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSH--FVILAED---------------GKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTE--EEEEETT---------------SCEEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCE--EEEEEcC---------------CCEEECCEEEECCCCCCCC
Confidence 468889999999999999999998 789999876532 3455543 3589999999999987654
No 166
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.25 E-value=0.07 Score=56.09 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=53.6
Q ss_pred EEehHHHHHHHHHHHHHCCc--EEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 9 RKSLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gv--ei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
..++.++.++|.+.+++.|+ .|+.+++|+++.+++++..+.|++.+ |.+++|++||.|+|..|
T Consensus 83 ~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------------G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 83 FASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN---------------EEVVTCRFLISATGPLS 147 (545)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT---------------TEEEEEEEEEECCCSCB
T ss_pred CCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC---------------CCEEEeCEEEECcCCCC
Confidence 46788999999999999998 89999999999987655567788764 56899999999999764
Q ss_pred c
Q 013495 87 S 87 (442)
Q Consensus 87 ~ 87 (442)
.
T Consensus 148 ~ 148 (545)
T 3uox_A 148 A 148 (545)
T ss_dssp C
T ss_pred C
Confidence 3
No 167
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=94.05 E-value=0.0034 Score=59.09 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=36.1
Q ss_pred cCCCCCcccCCCCCccccccccccceEE---Ee------------cC-CCC-ceeE-E----EecCCCccCCcccccCCC
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYE---YV------------PD-EKN-QLKL-Q----INAQNCLHCKACDIKDPK 423 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~---~~------------~~-~~~-~~~~-~----i~~~~Ci~Cg~C~~~cp~ 423 (442)
.|.+.|+.| +.|+++||..++. +. +. +.+ ..++ . .+...|+.||.|..+||.
T Consensus 143 ~~~~~Ci~C------g~C~~~CP~~~~~~~~~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 216 (243)
T 1kf6_B 143 HQFSGCINC------GLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPK 216 (243)
T ss_dssp GGGGCCCCC------CHHHHHCHHHHHCTTSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTT
T ss_pred hhhhhcccc------CccccccCCCcccCCCCCHHHHHHHHHHhhCccccchHHHHHHHhccCCcccCcccCCcchhCCC
Confidence 467899999 7999999987642 00 10 000 0011 1 245789999999999998
Q ss_pred CC
Q 013495 424 QN 425 (442)
Q Consensus 424 ~~ 425 (442)
+.
T Consensus 217 gi 218 (243)
T 1kf6_B 217 HV 218 (243)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 168
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.95 E-value=0.11 Score=53.02 Aligned_cols=68 Identities=21% Similarity=0.202 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l 92 (442)
..+.+.|.+..++.|++++++++|.++..++ +.+. |.+.+ |.++.++.||.|.|...... +
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~---------------g~~i~aD~Vv~a~G~~p~~~--l 262 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITD---------------KRTLDADLVILAAGVSPNTQ--L 262 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEES---------------SCEEECSEEEECSCEEECCH--H
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeC---------------CCEEEcCEEEECCCCCcCHH--H
Confidence 3566788888899999999999999998754 5544 65543 45899999999999976532 3
Q ss_pred HHhcCCc
Q 013495 93 IKNFKLR 99 (442)
Q Consensus 93 ~~~~gl~ 99 (442)
++..|+.
T Consensus 263 ~~~~gl~ 269 (472)
T 3iwa_A 263 ARDAGLE 269 (472)
T ss_dssp HHHHTCC
T ss_pred HHhCCcc
Confidence 4445664
No 169
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.93 E-value=0.17 Score=48.18 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=50.1
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+++.++-++|.+.+++.|++++.+++|.++..++++ .+.|.+.+ + +++++.||+|+|.++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~---------------g-~~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADG-VFKLVTNE---------------E-THYSKTVIITAGNGAF 124 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTS-CEEEEESS---------------E-EEEEEEEEECCTTSCC
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCC-cEEEEECC---------------C-EEEeCEEEECCCCCcC
Confidence 467899999999999999999999999999887643 34576653 3 5999999999999653
No 170
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.86 E-value=0.11 Score=53.24 Aligned_cols=69 Identities=14% Similarity=0.182 Sum_probs=51.5
Q ss_pred EEehHHHHHHHHHHHHHCCcE--EecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 9 RKSLSQLVRWLGGKAEELGVE--IYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gve--i~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+++..+-++|.+.|++.|++ |+.+++|.++..++++..+.|++.+. .+|+ ..++.++.||+|+|..|
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~---~~g~-------~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH---TTDT-------IYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEET---TTTE-------EEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc---CCCc-------eEEEEcCEEEECCCCCC
Confidence 467889999999999999998 99999999998876432345655420 1121 25789999999999654
Q ss_pred c
Q 013495 87 S 87 (442)
Q Consensus 87 ~ 87 (442)
.
T Consensus 167 ~ 167 (464)
T 2xve_A 167 T 167 (464)
T ss_dssp S
T ss_pred C
Confidence 3
No 171
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.81 E-value=0.097 Score=52.60 Aligned_cols=67 Identities=21% Similarity=0.325 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHHH
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLI 93 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~ 93 (442)
.+.++|.+..++.|+++++++.|.++..+ +.+.+|++.+ |.++.|+.||.|.|..... .++
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~d---------------g~~i~aD~Vv~a~G~~p~~--~l~ 246 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASD---------------GRSFVADSALICVGAEPAD--QLA 246 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETT---------------SCEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECC---------------CCEEEcCEEEEeeCCeecH--HHH
Confidence 56678888889999999999999998754 4566788764 4689999999999998653 244
Q ss_pred HhcCCc
Q 013495 94 KNFKLR 99 (442)
Q Consensus 94 ~~~gl~ 99 (442)
+..|+.
T Consensus 247 ~~~gl~ 252 (410)
T 3ef6_A 247 RQAGLA 252 (410)
T ss_dssp HHTTCC
T ss_pred HhCCCc
Confidence 556775
No 172
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=93.76 E-value=0.02 Score=46.48 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=22.5
Q ss_pred EEecCCCccCC--cccccCCCCCeeEE
Q 013495 405 QINAQNCLHCK--ACDIKDPKQNIKWT 429 (442)
Q Consensus 405 ~i~~~~Ci~Cg--~C~~~cp~~~I~w~ 429 (442)
.+|.++|++|| .|..+||.++|++.
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~ 28 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEG 28 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred eECccccCCccCcHHHHHcCccceEcC
Confidence 47889999999 99999999999874
No 173
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=93.76 E-value=0.02 Score=43.58 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=22.6
Q ss_pred EEecCCCcc--CCcccccCCCCCeeEE
Q 013495 405 QINAQNCLH--CKACDIKDPKQNIKWT 429 (442)
Q Consensus 405 ~i~~~~Ci~--Cg~C~~~cp~~~I~w~ 429 (442)
.+|.++|++ ||.|..+||.++|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~ 28 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDG 28 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEEchhCCCCCcChhhhhcCccceEcC
Confidence 478899999 9999999999999874
No 174
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=93.63 E-value=0.02 Score=50.83 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=21.1
Q ss_pred ecCCCccCCcccccCCCCCeeEEC
Q 013495 407 NAQNCLHCKACDIKDPKQNIKWTV 430 (442)
Q Consensus 407 ~~~~Ci~Cg~C~~~cp~~~I~w~~ 430 (442)
|.++|++||.|..+||+++|.+..
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~ 72 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEP 72 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEE
T ss_pred CCccCcccccchhhCCcccEEeec
Confidence 467999999999999999997653
No 175
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=93.62 E-value=0.05 Score=55.30 Aligned_cols=68 Identities=13% Similarity=0.062 Sum_probs=50.4
Q ss_pred EEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCC-CcE--EEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 8 NRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKV--IGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 8 y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~-g~v--~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
+...|.+|.++|...|++.|++++.+++|+++..+++ +.+ +.|++.+ .+|+ ..+++++.||+|+|.
T Consensus 122 ~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~----g~g~-------~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 122 FYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN----ADGE-------ELVRTTRALVVSPGG 190 (463)
T ss_dssp SCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE----TTSC-------EEEEEESEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec----CCCc-------eEEEEeCEEEECCCC
Confidence 3457899999999999999999999999999987621 333 3455543 1121 138999999999997
Q ss_pred CC
Q 013495 85 RG 86 (442)
Q Consensus 85 ~s 86 (442)
..
T Consensus 191 ~p 192 (463)
T 3s5w_A 191 TP 192 (463)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 176
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=93.59 E-value=0.01 Score=56.18 Aligned_cols=54 Identities=17% Similarity=0.211 Sum_probs=35.1
Q ss_pred cCCCCCcccCCCCCccccccccccceEE---------------EecCC-CC--cee--EE---EecCCCccCCcccccCC
Q 013495 366 RDPKIPELVNLPEYAGPESRYCPARVYE---------------YVPDE-KN--QLK--LQ---INAQNCLHCKACDIKDP 422 (442)
Q Consensus 366 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~---------------~~~~~-~~--~~~--~~---i~~~~Ci~Cg~C~~~cp 422 (442)
.+.+.|+.| +.|+.+||+.... +..+. +. ..+ .. .....|+.||.|..+||
T Consensus 153 ~~~~~Ci~C------G~C~~~CP~~~~~~~~~lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~~~~~C~~Cg~C~~~CP 226 (252)
T 2h88_B 153 DGLYECILC------ACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCP 226 (252)
T ss_dssp TTTTTCCCC------CTTGGGCHHHHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCT
T ss_pred HhHHhchhh------CcchhhCCCCccCCCCcCCHHHHHHHHHHhhCCcccchHHHHHHHhcccCCCcCccccchhhhcC
Confidence 356799999 7999999987621 10110 00 001 11 13479999999999999
Q ss_pred CCC
Q 013495 423 KQN 425 (442)
Q Consensus 423 ~~~ 425 (442)
.+.
T Consensus 227 ~~i 229 (252)
T 2h88_B 227 KGL 229 (252)
T ss_dssp TCC
T ss_pred CCC
Confidence 764
No 177
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=93.50 E-value=0.019 Score=66.03 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=31.9
Q ss_pred cccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 385 RYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 385 ~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
-.||.+...+....-....+.+|.++|++||.|..+||+.+|+..
T Consensus 662 G~~p~G~~~~~k~~i~~~~p~~d~~kCi~Cg~Cv~vCP~~AI~~~ 706 (1231)
T 2c42_A 662 GRFPLGTSQFEKRGVAINVPQWVPENCIQCNQCAFVCPHSAILPV 706 (1231)
T ss_dssp CCBCTTGGGGTCCCCCSEEEEECTTTCCCCCHHHHHCSSCCEEEE
T ss_pred CcccCCcccccccCCCccceEEeCccCCchhhHHHhCCccccccc
Confidence 467777532221110112578999999999999999999999875
No 178
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=93.32 E-value=0.89 Score=48.70 Aligned_cols=37 Identities=19% Similarity=-0.012 Sum_probs=30.5
Q ss_pred CCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 216 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 216 ~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
+++.++|++...-.+ .-++-|+.||..||+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 689999999875433 4578899999999999988764
No 179
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.25 E-value=0.13 Score=52.14 Aligned_cols=68 Identities=12% Similarity=-0.098 Sum_probs=50.1
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+.|..+.++|.+.+++.+..|+.+++|+++..++++ +.|++.+. .+|+. ..+++++.||+|+|.+|.
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~--~~V~~~~~---~~G~~------~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS--WVVTYKGT---KAGSP------ISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE--EEEEEEES---STTCC------EEEEEESEEEECCCSSSS
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe--EEEEEeec---CCCCe------eEEEEeCEEEECCCCCCC
Confidence 3568899999999999999999999999999876533 34555420 11210 127999999999999764
No 180
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.15 E-value=0.15 Score=51.95 Aligned_cols=59 Identities=12% Similarity=0.086 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-++|.+..++.|++++++++|.++..++++ .+.|.+.+ |.++.++.||.|.|.+...
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~---------------g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDG-SLTLELED---------------GRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTS-CEEEEETT---------------SCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCc-EEEEEECC---------------CcEEEcCEEEECCCCCcCC
Confidence 46677888888999999999999999876544 34676653 3589999999999998765
No 181
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.13 E-value=0.14 Score=49.20 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=47.2
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEc--CCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYD--ADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~--~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+++.++.++|.+.+++.|++++. .+|.++..+ +++ .+.|.+.+ +.++++++||+|+|.++.
T Consensus 62 ~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~-~~~v~~~~---------------g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHP-YPFTVRGY---------------NGEYRAKAVILATGADPR 124 (325)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSS-CCEEEEES---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCc-eEEEEECC---------------CCEEEeCEEEECcCCCcC
Confidence 56789999999999999999998 588888876 422 12344432 358999999999998654
No 182
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.04 E-value=0.19 Score=51.91 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+.+++.+..++.||++++++.|.++..++ +. +.|++.+ |.++.|+.||.|.|....
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~-~~v~l~d---------------G~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GK-LLIKLKD---------------GRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TE-EEEEETT---------------SCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-Ce-EEEEECC---------------CCEEECCEEEECCCCCcc
Confidence 3578888999999999999999999997654 43 4677654 468999999999998755
No 183
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=93.03 E-value=0.12 Score=53.67 Aligned_cols=61 Identities=25% Similarity=0.244 Sum_probs=45.2
Q ss_pred HHHHHHHCC-cEEecCCeEeEEEEcCCC-cEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 19 LGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 19 L~~~Ae~~G-vei~~g~~v~~i~~~~~g-~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+++.|++.| ++|++++.|++|+.+++| +++||++.+ .+|.. ....+++|+.||+|.|+-.+
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~----~~g~~----~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD----TDGKL----LATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC----TTCCE----EEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCcc----ceeEEEeeCEEEEccCCCCC
Confidence 346677776 999999999999998644 799998853 22310 00257999999999998644
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.97 E-value=0.14 Score=53.34 Aligned_cols=63 Identities=21% Similarity=0.276 Sum_probs=49.8
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCC-CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~-g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.++.+|.++|.+.+++.|++++.+++|.++..+.+ +..+.|.+.+ |.+++++.||+|+|.++.
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---------------g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---------------GAVLKARSIIIATGAKWR 327 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC---------------CCEEEcCEEEECCCCCcC
Confidence 46778999999999999999999999999976421 2235566653 458999999999998643
No 185
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.83 E-value=0.26 Score=46.61 Aligned_cols=60 Identities=15% Similarity=0.192 Sum_probs=48.3
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
++..++.++|.+.+++.|++++. ++|.++..+++. +.|.+.+ +.+++++.||+|+|....
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~~---------------g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE--FVVKTKR---------------KGEFKADSVILGIGVKRR 126 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C--EEEEESS---------------SCEEEEEEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE--EEEEECC---------------CCEEEcCEEEECcCCCCc
Confidence 56789999999999999999999 899999877533 4566653 468999999999998743
No 186
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=92.83 E-value=0.033 Score=44.88 Aligned_cols=25 Identities=28% Similarity=0.343 Sum_probs=22.4
Q ss_pred EEecCCCccC--CcccccCCCCCeeEE
Q 013495 405 QINAQNCLHC--KACDIKDPKQNIKWT 429 (442)
Q Consensus 405 ~i~~~~Ci~C--g~C~~~cp~~~I~w~ 429 (442)
.|+.++|++| |.|..+||.++|.+.
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~ 28 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEG 28 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEecccCCCCCcChhhhhcCccccCcC
Confidence 5788999988 999999999999864
No 187
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.80 E-value=0.27 Score=49.93 Aligned_cols=57 Identities=18% Similarity=0.073 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++ +.+ .|.+.+ + ++.++.||.|.|.+...
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~---------------g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSE---------------Q-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESS---------------C-EEEESEEEECSCCBCCC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECC---------------C-EEEeCEEEECcCCCCCh
Confidence 455677788888999999999999998665 555 677653 4 89999999999997653
No 188
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.58 E-value=0.22 Score=51.13 Aligned_cols=58 Identities=17% Similarity=0.169 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+.+++.|++|+++++|.++..++ +. +.|++.+ |.++.++.||.|.|.....
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~-v~v~~~~---------------g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQSTE-NC-YNVVLTN---------------GQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEECS-SS-EEEEETT---------------SCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CE-EEEEECC---------------CcEEEcCEEEEeeCCCcCC
Confidence 466778888889999999999999998765 33 3677654 4589999999999986543
No 189
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=92.51 E-value=0.25 Score=51.02 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++++ ++.|++.+ |.++.++.||.|.|.+...
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~---------------G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFES---------------GKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEETT---------------SCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEECC---------------CcEEEcCEEEECCCCcccc
Confidence 45667788888999999999999999876533 35677653 3589999999999987654
No 190
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.48 E-value=0.26 Score=50.76 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++ +. +.|++.+ +.++.++.||.|.|.+...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~-v~v~~~~---------------g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTG-AG-VLVTMTD---------------GRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECS-SS-EEEEETT---------------SCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CE-EEEEECC---------------CcEEEcCEEEECCCCCcCC
Confidence 466778888899999999999999998765 33 3565543 4689999999999998654
No 191
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=92.42 E-value=0.16 Score=52.74 Aligned_cols=63 Identities=13% Similarity=0.152 Sum_probs=45.8
Q ss_pred HHHHHHHHHCC-cEEecCCeEeEEEEcCCC-cEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 17 RWLGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 17 ~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g-~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..++..|++.| ++|++++.|++|+.++++ +++||++.+ .+|.. ....+++|+.||+|.|+-.+
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----~~g~~----~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----EQGNV----VATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----TTSCE----EEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCcc----cccEEEEeCEEEEccCccCC
Confidence 34455677775 999999999999998755 799998853 22310 00257999999999998644
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.39 E-value=0.24 Score=50.32 Aligned_cols=58 Identities=21% Similarity=0.295 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++ +.+..|.+. |.++.++.||.|.|.....
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~~----------------g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTLD----------------GKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEETT----------------SCEEEESEEEECCCEEECC
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEeC----------------CCEEECCEEEECcCCCCCH
Confidence 456678888889999999999999998644 666666542 3589999999999987664
No 193
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.27 E-value=0.31 Score=46.30 Aligned_cols=62 Identities=19% Similarity=0.138 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCC-CCCccCCCCceEEEEcEEEeccCCCC
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD-GSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~-G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+-+.|.+.+++.|++++++++|.++..++ +.+.+|++.+. .+ |+ +.++.++.||.|.|...
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~---~~~g~-------~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDT---QNSDN-------IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECC---TTCCC-------CEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEec---cCCCc-------eEEEEcCEEEEEeCCCC
Confidence 455667777888999999999999998765 56777877531 11 21 36899999999999763
No 194
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.25 E-value=0.22 Score=50.60 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+-+.|.+..++.|++++++++|.++..+++ .+.|++.+ +.++.++.||.|+|.++..
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~--~v~v~~~~---------------g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK--GARVELEG---------------GEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EEEEEETT---------------SCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EEEEEECC---------------CeEEEcCEEEECcCCCcCC
Confidence 45677888888999999999999999987653 24565542 4689999999999998765
No 195
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=92.23 E-value=0.25 Score=50.89 Aligned_cols=59 Identities=17% Similarity=0.170 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++++ ++.|++.+ |.++.++.||.|.|.+...
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~---------------G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADG-TRHVVFES---------------GAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-CEEEEETT---------------SCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-EEEEEECC---------------CcEEEcCEEEEccCCCcCc
Confidence 45677888889999999999999999876533 35677653 3589999999999987553
No 196
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=92.02 E-value=0.21 Score=51.03 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+.+.|.+..++.|++|+++++|.++..++++.++.|.+.+. .+| .+.++.++.||.|.|.+...
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g-------~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDT---KTN-------KQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEET---TTT-------EEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEc---CCC-------CceEEECCEEEECCCCCcCC
Confidence 466788888899999999999999998631244456665420 111 14689999999999987664
No 197
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.91 E-value=0.31 Score=49.65 Aligned_cols=57 Identities=23% Similarity=0.194 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEE-eCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG-TNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~-t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+-+.|.+..++.|++|+++++|.++..++++. +.|+ +.+ |. +.++.||.|.|....
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~---------------g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKH---------------GE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSS---------------CE-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCC---------------Ce-EEeCEEEEeeCcccC
Confidence 456778888899999999999999998876453 5677 653 44 999999999998654
No 198
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=91.90 E-value=0.0066 Score=66.85 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=37.0
Q ss_pred CCCCCcccCCCCCccccccccccceEEEecC----CCCc-eeEEEecCCCccCCcccccCCCCCee
Q 013495 367 DPKIPELVNLPEYAGPESRYCPARVYEYVPD----EKNQ-LKLQINAQNCLHCKACDIKDPKQNIK 427 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~----~~~~-~~~~i~~~~Ci~Cg~C~~~cp~~~I~ 427 (442)
+.+.|+.| +.|..+||..+. ..+- ..|. ..+..+...|+.||.|..+||.+++.
T Consensus 413 ~~~~Ci~C------G~C~~~CP~~~~-~~~il~~~~~G~~~~~~~~~~~Ci~Cg~C~~vCP~ga~~ 471 (807)
T 3cf4_A 413 MVAKCADC------GACLLACPEEID-IPEAMGFAKKGDFSYFEEIHDTCIGCRRCEQVCKKEIPI 471 (807)
T ss_dssp HHHHCCCC------CHHHHHCTTCCC-HHHHHHHHHTTCTHHHHHHHHHCCCCCHHHHHCTTCCCH
T ss_pred hHHhCCCC------CchhhhCCCCCc-hHHHHHHHHcCChhhhhhchhhccchhhHHHhCCCCCCh
Confidence 46789998 799999999862 1110 0010 01234567899999999999998853
No 199
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=91.88 E-value=0.047 Score=55.61 Aligned_cols=27 Identities=26% Similarity=0.520 Sum_probs=24.9
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
.+.+|.++|++||.|..+||.++|...
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~ 53 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGE 53 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCC
T ss_pred eEEECcccCCCccHHHHhcCcCceecc
Confidence 689999999999999999999999754
No 200
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=91.77 E-value=0.31 Score=49.79 Aligned_cols=58 Identities=21% Similarity=0.148 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCce-EEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~-~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++++++++|.++..++++ +.|++.+ |. ++.++.||.|.|.+...
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~---------------G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQD---------------GTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETT---------------CCEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeC---------------CcEEEEcCEEEECCCCCcCC
Confidence 45667788888999999999999999876533 4666653 35 79999999999987654
No 201
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.46 E-value=0.25 Score=47.60 Aligned_cols=61 Identities=18% Similarity=0.161 Sum_probs=46.8
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEE-EeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGI-GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV-~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+++.++.++|.+.+++.|++++.++ |.++.. ++.. .| .+.+ +.+++++.||+|+|.++.
T Consensus 67 ~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~--~v~~~~~---------------g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 67 GITGPELMDEMREQALRFGADLRMED-VESVSL-HGPL--KSVVTAD---------------GQTHRARAVILAMGAAAR 127 (335)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSS--EEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcE--EEEEeCC---------------CCEEEeCEEEECCCCCcc
Confidence 35678899999999999999999997 888876 3232 34 4442 358999999999998754
Q ss_pred c
Q 013495 88 L 88 (442)
Q Consensus 88 l 88 (442)
.
T Consensus 128 ~ 128 (335)
T 2a87_A 128 Y 128 (335)
T ss_dssp C
T ss_pred C
Confidence 3
No 202
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=91.27 E-value=0.33 Score=46.13 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=46.5
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
+.+..+.++|.+.+++.|++++.++ |.++..+++. +.| +.+ +.++.+++||+|+|.++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~--~~v-~~~---------------~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRP--FRL-NGD---------------NGEYTCDALIIATGASARY 118 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS--EEE-EES---------------SCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCE--EEE-EeC---------------CCEEEcCEEEECCCCCcCC
Confidence 5678899999999999999999986 8888765432 233 332 3579999999999987543
No 203
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.16 E-value=0.32 Score=46.33 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=49.5
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+++.++-++|.+.+++.|++++.++ |.++..++ +. +.+.+... . .+.++.++.||+|+|.++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~-~~-~~v~~~~~---~---------~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGTEIITET-VSKVDLSS-KP-FKLWTEFN---E---------DAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS-SS-EEEEETTC---S---------SSCCEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC-CE-EEEEEEec---C---------CCcEEEeCEEEECcCCCcCC
Confidence 46788999999999999999999998 99987765 33 34555310 0 14579999999999986543
No 204
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=91.14 E-value=0.022 Score=53.34 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=35.1
Q ss_pred CCCCCcccCCCCCccccccccccceEE--E-e-----------cCC--C-Cc-eeE-----EEecCCCccCCcccccCCC
Q 013495 367 DPKIPELVNLPEYAGPESRYCPARVYE--Y-V-----------PDE--K-NQ-LKL-----QINAQNCLHCKACDIKDPK 423 (442)
Q Consensus 367 d~~~c~~~~~~~~~~~c~~~CPa~~y~--~-~-----------~~~--~-~~-~~~-----~i~~~~Ci~Cg~C~~~cp~ 423 (442)
+.+.|+.| +.|..+||+.++. + . .+. + .. .++ .....+|+.||.|..+||.
T Consensus 147 ~~~~Ci~C------g~C~~~CP~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 220 (241)
T 2bs2_B 147 ELDRCIEC------GCCIAACGTKIMREDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPK 220 (241)
T ss_dssp HHHTCCCC------CHHHHTCHHHHHCTTCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTT
T ss_pred hhhhhhcc------CcCcccCCCCccCCCCCCHHHHHHHHHHhhCccccccHHHHHHHHhcccCcccCcccChhhHhcCC
Confidence 45789999 7999999998742 1 0 010 0 00 000 2245789999999999997
Q ss_pred CC
Q 013495 424 QN 425 (442)
Q Consensus 424 ~~ 425 (442)
+.
T Consensus 221 ~i 222 (241)
T 2bs2_B 221 NL 222 (241)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 205
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=91.11 E-value=0.41 Score=48.73 Aligned_cols=57 Identities=19% Similarity=0.126 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++ .++.|.+. +.++.++.||.|.|.+...
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~----------------~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GEFVLTTT----------------HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEET--TEEEEEET----------------TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEC----------------CcEEEcCEEEECCCCCcCC
Confidence 466778888899999999999999998754 34556654 2579999999999998764
No 206
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=91.00 E-value=0.34 Score=46.19 Aligned_cols=59 Identities=14% Similarity=0.116 Sum_probs=46.2
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+++.++.+.|.+.+++.|++++. .+|.++..++++ +.|.+. +.++++++||+|+|.++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~--~~v~~~----------------~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 69 IVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGG--FDIETN----------------DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp BCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTE--EEEEES----------------SSEEEEEEEEECCCEEEC
T ss_pred cCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCE--EEEEEC----------------CCEEEeCEEEECCCCCcc
Confidence 46678899999999999999998 689998876532 335543 247999999999998654
No 207
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=90.63 E-value=0.54 Score=48.16 Aligned_cols=56 Identities=13% Similarity=0.246 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+.+.|.+.+++.|++|+++++|.++..+ +.+..|.+. +.++.++.||.|.|....
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~----------------~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETD----------------KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEET----------------TEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEEC----------------CCEEEcCEEEECcCCCcC
Confidence 56678888899999999999999999764 456667664 247999999999998754
No 208
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=90.41 E-value=0.52 Score=47.18 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHHH
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLI 93 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~ 93 (442)
.+.++|.+..++.|++++++++|.++. + + +|++.+ |.++.++.||.|.|..... .++
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~---------------g~~i~~D~vi~a~G~~p~~--~l~ 244 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDD---------------GTRIAADMVVVGIGVLAND--ALA 244 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETT---------------SCEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECC---------------CCEEEcCEEEECcCCCccH--HHH
Confidence 566788888899999999999999997 3 4 466653 4689999999999987653 244
Q ss_pred HhcCCc
Q 013495 94 KNFKLR 99 (442)
Q Consensus 94 ~~~gl~ 99 (442)
+..|+.
T Consensus 245 ~~~gl~ 250 (408)
T 2gqw_A 245 RAAGLA 250 (408)
T ss_dssp HHHTCC
T ss_pred HhCCCC
Confidence 455765
No 209
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=90.25 E-value=0.4 Score=49.62 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=53.1
Q ss_pred CCEEEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCC------cEEEEEeCCccccCCCCCccCCCCceEEEEcEEE
Q 013495 6 NGNRKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN------KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITL 79 (442)
Q Consensus 6 ~~y~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g------~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI 79 (442)
+.+..+|.+|.++|..-|++.+..|+.+++|+++..++++ ..+.|++.+. ..| ...+++|+.||
T Consensus 138 ~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~---~~g-------~~~~~~ar~vV 207 (501)
T 4b63_A 138 STFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV---ETG-------EISARRTRKVV 207 (501)
T ss_dssp CCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET---TTC-------CEEEEEEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecC---CCc-------eEEEEEeCEEE
Confidence 3456889999999999999999889999999999876532 2456666531 123 23679999999
Q ss_pred eccCC
Q 013495 80 LAEGC 84 (442)
Q Consensus 80 ~AdG~ 84 (442)
.|+|.
T Consensus 208 latG~ 212 (501)
T 4b63_A 208 IAIGG 212 (501)
T ss_dssp ECCCC
T ss_pred ECcCC
Confidence 99994
No 210
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.11 E-value=0.8 Score=47.13 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceE-EEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVE-LRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~-i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++++++++|.++..++++. +.|.+.+ |.+ +.++.||.|.|.....
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~---------------g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSD---------------GRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETT---------------SCEEEEESEEEECCCBCCTT
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECC---------------CcEEEECCEEEECCCCCcCC
Confidence 556677888889999999999999998765443 4566653 345 9999999999988654
No 211
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=89.91 E-value=0.46 Score=44.29 Aligned_cols=62 Identities=13% Similarity=0.128 Sum_probs=48.4
Q ss_pred EEehHHHHHHHHHHHHHC-CcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 9 RKSLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~-Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.++..++-++|.+.+++. +++++.+ +|+++..++++ +.|.+.+ +.+++++.||+|+|.++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~--~~v~~~~---------------g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGE--FIVEIDG---------------GRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTE--EEEEETT---------------SCEEEEEEEEECCCCEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCe--EEEEECC---------------CCEEEcCEEEECCCCCCC
Confidence 356778899999999987 7888765 89999887633 4566653 457999999999999755
Q ss_pred c
Q 013495 88 L 88 (442)
Q Consensus 88 l 88 (442)
+
T Consensus 114 ~ 114 (297)
T 3fbs_A 114 L 114 (297)
T ss_dssp C
T ss_pred C
Confidence 4
No 212
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=89.83 E-value=2.6 Score=46.57 Aligned_cols=38 Identities=18% Similarity=-0.018 Sum_probs=31.3
Q ss_pred CCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 216 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 216 ~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
+++.++|++...-.+ .-++-|+.||..||+.|.+.+.+
T Consensus 794 grL~FAGE~Ts~~~~---gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCCC---cCHHHHHHHHHHHHHHHHHHhhC
Confidence 689999999875433 45888999999999999988754
No 213
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=89.16 E-value=0.4 Score=48.47 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+.+.|.+.+++.|++++++++|.++..+ +.+..|.+. +.++.++.||.|.|.+...
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~----------------~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD----------------KNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES----------------SCEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC----------------CCEEECCEEEECcCCCCCh
Confidence 356678888889999999999999998754 445556553 2579999999999987653
No 214
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=89.13 E-value=0.075 Score=51.18 Aligned_cols=17 Identities=29% Similarity=0.499 Sum_probs=14.9
Q ss_pred cCCCccCCcccccCCCC
Q 013495 408 AQNCLHCKACDIKDPKQ 424 (442)
Q Consensus 408 ~~~Ci~Cg~C~~~cp~~ 424 (442)
-..|..||.|..+||.+
T Consensus 236 l~~C~~Cg~C~~vCP~g 252 (282)
T 3vr8_B 236 AFKCHTIMNCTKTCPKH 252 (282)
T ss_pred cccChhhCCccccCcCC
Confidence 46899999999999954
No 215
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=88.98 E-value=0.48 Score=50.22 Aligned_cols=73 Identities=15% Similarity=0.289 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcC---CCcEEEEEeCCccccCCCCCccCCCCceEEEEc-EEEeccCCCCccc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDA---DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLS 89 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~---~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak-~vI~AdG~~s~la 89 (442)
....+|...+.+.+++|++++.|+.|++++ +++++||+..+ ++|+ ..+++|+ -||+|.|+-.+
T Consensus 228 aa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~-------~~~v~A~kEVILsAGa~~S-- 294 (583)
T 3qvp_A 228 AAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGN-------THNVYAKHEVLLAAGSAVS-- 294 (583)
T ss_dssp HHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTC-------EEEEEEEEEEEECSCTTTH--
T ss_pred HHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCc-------EEEEEECCEEEEeCCccCC--
Confidence 456666555556799999999999999984 47899999763 2443 3678996 79999998755
Q ss_pred HHHHHhcCCc
Q 013495 90 EKLIKNFKLR 99 (442)
Q Consensus 90 r~l~~~~gl~ 99 (442)
-||+..-|+-
T Consensus 295 PqLL~lSGIG 304 (583)
T 3qvp_A 295 PTILEYSGIG 304 (583)
T ss_dssp HHHHHHTTBS
T ss_pred HHHHHHcCCC
Confidence 4555555654
No 216
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=88.87 E-value=0.82 Score=46.54 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.++-+.|.+..++.|++++++++|.++..++++. +.|.+.+. .++ .+.++.++.||.|.|.+...
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~---~~~-------~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGK-IDVSIEAA---SGG-------KAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSC-EEEEEEET---TSC-------CCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCce-EEEEEEec---CCC-------CceEEEcCEEEECcCCCcCC
Confidence 3566778888899999999999999998765332 34543210 011 24689999999999988664
No 217
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.84 E-value=0.8 Score=43.51 Aligned_cols=58 Identities=19% Similarity=0.125 Sum_probs=43.6
Q ss_pred HHHHHHHHHC-CcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 17 RWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 17 ~~L~~~Ae~~-Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.+.++.++. |+++++++.|.++..++ +.+.+|++.+. .+| .+.++.++.||.|.|..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~---~~g-------~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNT---KKN-------EETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTT-------EEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEEC---CCC-------ceEEEEeCEEEEEeCCC
Confidence 4556666665 99999999999998775 56777877641 122 14689999999999975
No 218
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.56 E-value=0.36 Score=50.62 Aligned_cols=68 Identities=21% Similarity=0.302 Sum_probs=47.4
Q ss_pred HHHHHH-HCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEc-EEEeccCCCCcccHHHHHhc
Q 013495 19 LGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKLIKNF 96 (442)
Q Consensus 19 L~~~Ae-~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak-~vI~AdG~~s~lar~l~~~~ 96 (442)
+++.|. +.|++|++++.|++|+.+++++++||++.+. .+|+ ..+++|+ .||+|.|+-. +.+|+...
T Consensus 214 ~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~---~~g~-------~~~i~A~k~VIlaaG~~~--sp~lL~~S 281 (546)
T 2jbv_A 214 YIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDS---AFGH-------THRLTARNEVVLSTGAID--TPKLLMLS 281 (546)
T ss_dssp HTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESS---TTSC-------EEEEEEEEEEEECSHHHH--HHHHHHHT
T ss_pred HHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEEC---CCCc-------EEEEEeCccEEEecCccC--Cchhhhhc
Confidence 334444 5799999999999999976578999987641 1132 2589998 9999999842 23444444
Q ss_pred CC
Q 013495 97 KL 98 (442)
Q Consensus 97 gl 98 (442)
|+
T Consensus 282 Gi 283 (546)
T 2jbv_A 282 GI 283 (546)
T ss_dssp TE
T ss_pred CC
Confidence 44
No 219
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=88.56 E-value=0.63 Score=44.95 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
..+...+...+++.|++|+.+++|++|..++++ +.|.+.+ |.+++|+.||.|..+
T Consensus 109 ~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~---------------g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 109 QGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQT---------------GSPEQFDLIVLTMPV 163 (342)
T ss_dssp TCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESS---------------SCCEEESEEEECSCH
T ss_pred CCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECC---------------CCEEEcCEEEECCCH
Confidence 334444444555569999999999999987644 3466653 345899999999875
No 220
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=88.27 E-value=1.2 Score=46.29 Aligned_cols=69 Identities=20% Similarity=0.345 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEc------------------CCCcEEEEEeCCccccCCCCCccCCCCceEEE
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYD------------------ADNKVIGIGTNDMGIAKDGSKKENFQRGVELR 74 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~------------------~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~ 74 (442)
..+-++|.+..++.|++++++++|.++..+ +++.+ .|.+.+ |.++.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~---------------g~~i~ 255 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSN---------------GELLE 255 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETT---------------SCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcC---------------CCEEE
Confidence 356677888889999999999999999873 22332 344432 45899
Q ss_pred EcEEEeccCCCCcccHHHHHhcCCc
Q 013495 75 GRITLLAEGCRGSLSEKLIKNFKLR 99 (442)
Q Consensus 75 Ak~vI~AdG~~s~lar~l~~~~gl~ 99 (442)
++.||.|.|...... +++..|+.
T Consensus 256 ~D~vi~a~G~~p~~~--l~~~~g~~ 278 (565)
T 3ntd_A 256 TDLLIMAIGVRPETQ--LARDAGLA 278 (565)
T ss_dssp ESEEEECSCEEECCH--HHHHHTCC
T ss_pred cCEEEECcCCccchH--HHHhCCcc
Confidence 999999999986642 34445654
No 221
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=88.26 E-value=0.23 Score=52.61 Aligned_cols=71 Identities=17% Similarity=0.300 Sum_probs=50.3
Q ss_pred HHHHHHHHHHCCcEEecCCeEeEEEEcCC---CcEEEEEeCCccccCCCCCccCCCCceEEEE-cEEEeccCCCCcccHH
Q 013495 16 VRWLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGSLSEK 91 (442)
Q Consensus 16 d~~L~~~Ae~~Gvei~~g~~v~~i~~~~~---g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~A-k~vI~AdG~~s~lar~ 91 (442)
..+|...+++.+++|++++.|++|+.+++ ++++||+..+ .+|+ ..+++| |-||+|.|+-.+ .+
T Consensus 234 ~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----~~g~-------~~~v~A~k~VILaaG~~~s--p~ 300 (587)
T 1gpe_A 234 RAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----NKAV-------NFDVFAKHEVLLAAGSAIS--PL 300 (587)
T ss_dssp HHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----ETTE-------EEEEEEEEEEEECSCTTTH--HH
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----CCCc-------EEEEEecccEEEccCCCCC--HH
Confidence 44554455568999999999999998753 4799998763 2332 257899 999999998653 34
Q ss_pred HHHhcCCc
Q 013495 92 LIKNFKLR 99 (442)
Q Consensus 92 l~~~~gl~ 99 (442)
|+..-|+-
T Consensus 301 lL~~SGIG 308 (587)
T 1gpe_A 301 ILEYSGIG 308 (587)
T ss_dssp HHHHTTEE
T ss_pred HHHhCCCC
Confidence 44444553
No 222
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=88.22 E-value=1.1 Score=45.41 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=45.0
Q ss_pred HHHHHHHHHH-HHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKA-EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~A-e~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+.. ++.|++++++++|.++..++++ +.|.+.+ .+|+ +.++.++.||.|.|.+...
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~----~~g~-------~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS--VSLEVEG----KNGK-------RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS--EEEEEEC----C----------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe--EEEEEEc----CCCc-------eEEEECCEEEECCCcccCC
Confidence 4566777888 8999999999999999876533 3455431 1221 2579999999999988764
No 223
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=88.14 E-value=0.77 Score=43.67 Aligned_cols=60 Identities=15% Similarity=0.104 Sum_probs=45.1
Q ss_pred HHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 16 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 16 d~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+..|.+++++.|++++++++|.++..++ +++.+|.+.+. .+|+ ..++.++.||.|.|...
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDR---TTGE-------EKLIETDGVFIYVGLIP 252 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEET---TTCC-------EEEECCSEEEECCCEEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEc---CCCc-------eEEEecCEEEEeeCCcc
Confidence 4567788889999999999999998764 56777776520 1232 24799999999999753
No 224
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=88.12 E-value=0.24 Score=51.75 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=47.4
Q ss_pred HHHHHHHCCcEEecCCeEeEEEEcCC--CcEEEEEeCCccccCCCCCccCCCCceEE---EEcEEEeccCCCCcccHHHH
Q 013495 19 LGGKAEELGVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKLI 93 (442)
Q Consensus 19 L~~~Ae~~Gvei~~g~~v~~i~~~~~--g~v~gV~t~~~g~~~~G~~~~~~~~g~~i---~Ak~vI~AdG~~s~lar~l~ 93 (442)
|.+.|++.|++|++++.|++|+++++ ++++||++.+ .+|+ ..++ .+|.||+|.|+-. +.+|+
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~----~~g~-------~~~~~v~a~k~VILaaGa~~--sp~lL 266 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD----SNGT-------PHQAFVRSKGEVIVSAGTIG--TPQLL 266 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC----TTSC-------EEEEEEEEEEEEEECCHHHH--HHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe----CCCc-------eEEEEeccCCEEEEcCcccC--CHHHH
Confidence 44556788999999999999999863 4899998863 2332 1345 5799999999864 34444
Q ss_pred HhcCC
Q 013495 94 KNFKL 98 (442)
Q Consensus 94 ~~~gl 98 (442)
...|+
T Consensus 267 ~~SGi 271 (536)
T 1ju2_A 267 LLSGV 271 (536)
T ss_dssp HHTTE
T ss_pred HHcCC
Confidence 44444
No 225
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=87.85 E-value=0.8 Score=44.42 Aligned_cols=62 Identities=11% Similarity=0.130 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+-+.|.+..++.|++++++++|.++..++ +.+.+|.+.. .+|+ ..++.++.||.|.|....
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~----~~g~-------~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRS----SDGS-------KWTVEADRLLILIGFKSN 264 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEE----TTCC-------EEEEECSEEEECCCBCCS
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEe----cCCC-------eEEEeCCEEEECCCCCCC
Confidence 455667777888999999999999998765 6666777641 1231 257999999999997643
No 226
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=87.26 E-value=1.4 Score=44.80 Aligned_cols=66 Identities=14% Similarity=-0.058 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+-+.+.+..++.|++++++++|.++..++++..+.|.+.+. .+|+. .+.++.++.||.|.|....
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~-----~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVP---GRLPV-----MTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCT---TSCCE-----EEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccC---CCCcc-----cceEEEcCEEEEeeccccC
Confidence 456677778888999999999999998776563455666531 11110 1268999999999998644
No 227
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=87.13 E-value=0.83 Score=43.08 Aligned_cols=60 Identities=20% Similarity=0.166 Sum_probs=44.6
Q ss_pred HHHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 15 LVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 15 fd~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+|+.+.++.++ .|+++++++++.++..++ +++.+|++.+. .+|+ ..++.++.||.|.|..
T Consensus 181 ~~~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 181 ADQVLQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD-------IHNIELAGIFVQIGLL 241 (310)
T ss_dssp SCHHHHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEET---TTCC-------EEEEECSEEEECSCEE
T ss_pred ccHHHHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEEC---CCCc-------EEEEEcCEEEEeeCCc
Confidence 45667777777 699999999999998664 67777877531 1231 2579999999999865
No 228
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=87.05 E-value=0.7 Score=47.41 Aligned_cols=56 Identities=27% Similarity=0.301 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+-+.|.+..++.|++|+++++|.++.. ++.+..|.+. +.++.++.||.|.|....
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~----------------g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITD----------------KNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEES----------------SCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEEC----------------CcEEECCEEEECCCCCcC
Confidence 4556777788889999999999999975 3555556652 357999999999998654
No 229
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.75 E-value=0.67 Score=47.74 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=40.4
Q ss_pred HHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 21 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 21 ~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+++++.||+|++++.|.++..+ +.+.+|.+.+ |.++.++.||.|.|.+..
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~---------------g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN--EKVERVIDMN---------------NHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS--SSCCEEEETT---------------CCEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCC---------------CeEEEeCEEEECCCcCcC
Confidence 6678899999999999999754 4466777653 468999999999998765
No 230
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=86.74 E-value=1.2 Score=45.43 Aligned_cols=64 Identities=17% Similarity=0.167 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+.+.|.+..++.|++++++++|.++..++ +. +.|.+.+ +..|+ ..++.++.||.|.|.+...
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~---~~~g~-------~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKK-DG-LHVRLEP---AEGGE-------GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TE-EEEEEEE---TTCCS-------CEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CE-EEEEEee---cCCCc-------eeEEEcCEEEECCCcccCC
Confidence 3566778888899999999999999998765 32 3455431 00131 2389999999999998765
No 231
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=86.58 E-value=1.2 Score=46.65 Aligned_cols=66 Identities=14% Similarity=0.159 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l 92 (442)
..+.+.|.+..++.|++|+++++|.++..++ + +|.+.+ |.++.++.||.|.|..... .+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~---------------g~~i~~D~Vi~a~G~~p~~--~~ 286 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENG-A---VVRLKS---------------GSVIQTDMLILAIGVQPES--SL 286 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETT---------------SCEEECSEEEECSCEEECC--HH
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCC-C---EEEECC---------------CCEEEcCEEEEccCCCCCh--HH
Confidence 3566778888889999999999999997543 2 355543 4689999999999987654 23
Q ss_pred HHhcCCc
Q 013495 93 IKNFKLR 99 (442)
Q Consensus 93 ~~~~gl~ 99 (442)
++..|+.
T Consensus 287 l~~~g~~ 293 (588)
T 3ics_A 287 AKGAGLA 293 (588)
T ss_dssp HHHTTCC
T ss_pred HHhcCce
Confidence 4555654
No 232
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.58 E-value=1.1 Score=45.87 Aligned_cols=63 Identities=19% Similarity=0.218 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
++-+.|.+..++.|++|+++++|.++..++++. +.|.+.+. .+| ...++.++.||.|.|....
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~---~~~-------~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGK-LLVKYKNV---ETG-------EESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSC-EEEEEEET---TTC-------CEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCc-EEEEEecC---CCC-------ceeEEEcCEEEECcccccC
Confidence 456677788889999999999999998766554 34655430 112 1247999999999998654
No 233
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=85.78 E-value=1.7 Score=44.20 Aligned_cols=61 Identities=15% Similarity=0.104 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++++++++|.++..++++ +.|.+.+ .+| ..++.++.||.|.|.....
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~v~~~~----~~g--------~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVKNKQ--VTVKFVD----AEG--------EKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEECSSC--EEEEEES----SSE--------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE--EEEEEEe----CCC--------cEEEECCEEEEeeCCcccC
Confidence 45566777788899999999999999876533 3355442 111 1579999999999987543
No 234
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.77 E-value=1.3 Score=44.74 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
++-+.|.+..++.|++++++++|.++..++++ +.|.+.+ +| .+.++.++.||.|.|.+...
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~-----~g-------~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEEREDG--VTVTYEA-----NG-------ETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEETTE--EEEEEEE-----TT-------EEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEEe-----CC-------ceeEEEcCEEEECcCCCccc
Confidence 45567778888999999999999999876532 3444431 11 14689999999999987653
No 235
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=85.50 E-value=1 Score=42.25 Aligned_cols=51 Identities=22% Similarity=0.185 Sum_probs=39.2
Q ss_pred HHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 23 AEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 23 Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.++.|+++++++++.++..++ +++.+|++.. .+|+ ..++.++.||.|.|..
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~----~~g~-------~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDK-MGVAGVKVKL----KDGS-------IRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEET-TEEEEEEEEC----TTSC-------EEEECCSCEEECSCEE
T ss_pred HhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEc----CCCC-------eEEeecCeEEEEEcCC
Confidence 357899999999999998765 5777777652 2342 2479999999999975
No 236
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=85.48 E-value=1.1 Score=46.73 Aligned_cols=70 Identities=14% Similarity=0.188 Sum_probs=49.0
Q ss_pred HHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEE---EEcEEEeccCCCCcccHHH
Q 013495 17 RWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 17 ~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i---~Ak~vI~AdG~~s~lar~l 92 (442)
..+++.|++ .|++|++++.|++|+.++ ++++||++.+. .+|+ ..++ .+|.||+|.|+.++ .+|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~---~~g~-------~~~~~v~~~~~VIlaaG~~~s--p~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDP---TLGP-------NGFIPVTPKGRVILSAGAFGT--SRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCT---TSSG-------GGEEEEEEEEEEEECSHHHHH--HHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEec---CCCc-------eeEEEEEeCCEEEEcCChhcC--HHH
Confidence 335566665 699999999999999975 78999998641 1232 1233 89999999998543 345
Q ss_pred HHhcCCc
Q 013495 93 IKNFKLR 99 (442)
Q Consensus 93 ~~~~gl~ 99 (442)
+...|+.
T Consensus 266 L~~sGig 272 (546)
T 1kdg_A 266 LFQSGIG 272 (546)
T ss_dssp HHHTTBS
T ss_pred HHHcCCC
Confidence 4455654
No 237
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=85.28 E-value=0.87 Score=46.24 Aligned_cols=38 Identities=18% Similarity=-0.016 Sum_probs=31.8
Q ss_pred CCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 216 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 216 ~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
+|+.++|++... -...+|+-|+.||+.||+.|.+.+..
T Consensus 423 ~~l~fAG~~t~~---~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 423 GRVYFTGEHTSE---HYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp TTEEECSGGGCT---TTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccCC---CCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 699999998753 23568999999999999999887754
No 238
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.89 E-value=1.2 Score=43.88 Aligned_cols=62 Identities=23% Similarity=0.353 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHHH
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLI 93 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~ 93 (442)
++.++|.+..++.|++++++++|.++. . . +|++.+ |. +.++.||.|.|...... ++
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~---------------g~-i~~D~vi~a~G~~p~~~--ll 239 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNS---------------GF-IEGKVKICAIGIVPNVD--LA 239 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETT---------------EE-EECSCEEEECCEEECCH--HH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECC---------------CE-EEcCEEEECcCCCcCHH--HH
Confidence 456778888899999999999999985 2 2 366553 44 99999999999886642 45
Q ss_pred HhcCCc
Q 013495 94 KNFKLR 99 (442)
Q Consensus 94 ~~~gl~ 99 (442)
+..|+.
T Consensus 240 ~~~gl~ 245 (367)
T 1xhc_A 240 RRSGIH 245 (367)
T ss_dssp HHTTCC
T ss_pred HhCCCC
Confidence 556765
No 239
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=84.77 E-value=2.2 Score=43.53 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++++++++|.++..++++ +.|.+.+. .+|+ ..++.++.||.|.|.....
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~--~~v~~~~~---~~g~-------~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG--AKVTFEPV---KGGE-------ATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTE--EEEEEEET---TSCC-------CEEEEESEEEECCCCEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE--EEEEEEec---CCCc-------eEEEEcCEEEEeeCCccCC
Confidence 45667777888899999999999999876533 34554420 1121 3689999999999997654
No 240
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.75 E-value=1.5 Score=44.48 Aligned_cols=63 Identities=10% Similarity=0.151 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|++|+++++|.++..++++ +.|.+.+ ..+|+ +.++.++.||.|.|.....
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~---~~~g~-------~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG--VKLTVEP---SAGGE-------QTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECSSSS--EEEEEEE---SSSCC-------CEEEEESEEECCCCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe--EEEEEEe---cCCCc-------ceEEECCEEEECCCCCcCC
Confidence 45667788888999999999999999765433 3454431 01221 3689999999999987654
No 241
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=83.59 E-value=2.8 Score=39.82 Aligned_cols=63 Identities=16% Similarity=0.073 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+-+.|.+..++.|+++++++.+.++..+ +.+.+|.+.+. .+|+ ..++.++.||.|.|....
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHN---QTQE-------ELALEVDAVLILAGYITK 253 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEET---TTCC-------EEEEECSEEEECCCEEEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEEC---CCCc-------eEEEecCEEEEeecCCCC
Confidence 345567777777889999999999999863 55667776420 1231 268999999999997643
No 242
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=83.00 E-value=2.5 Score=42.69 Aligned_cols=61 Identities=20% Similarity=0.289 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-++|.+..++.|++++++++|.++..++++ +.|.+.+ +|+ +.++.++.||.|.|.....
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~-----~g~-------~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADGGSQ--VTVTVTK-----DGV-------AQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEECSSC--EEEEEES-----SSC-------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCe--EEEEEEc-----CCc-------eEEEEcCEEEECCCCCccC
Confidence 45566778888899999999999999876533 3455431 221 2579999999999987654
No 243
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=82.68 E-value=2.4 Score=39.72 Aligned_cols=58 Identities=19% Similarity=0.113 Sum_probs=41.6
Q ss_pred HHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 18 WLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 18 ~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.+.+++.+ .|+++++++++.++..+ +.+.+|++.+. .+|+ ..++.++.||.|.|....
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~-------~~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGE-------IKELNVNGVFIEIGFDPP 252 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCC-------EEEEECSEEEECCCEECC
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCc-------eEEEEcCEEEEEECCCCC
Confidence 34555555 49999999999999765 45677776531 1232 247999999999998755
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=82.20 E-value=2 Score=40.15 Aligned_cols=60 Identities=7% Similarity=0.035 Sum_probs=44.3
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+++.++-.+|.+.+++.|++++.+ +|.++ .+++...+.|.+.. .+ +++++.||.|+|...
T Consensus 59 ~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~--------------~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 59 MDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEG--------------GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp BCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETT--------------SC-EEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEec--------------CC-EEEeCEEEEeeCCCC
Confidence 567789999999999999999998 88888 65411223332221 14 899999999999853
No 245
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=82.00 E-value=0.26 Score=52.15 Aligned_cols=27 Identities=26% Similarity=0.529 Sum_probs=24.6
Q ss_pred eEEEecCCCccCCcccccCCC----CCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKDPK----QNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~cp~----~~I~w~ 429 (442)
.+.+|.++|++||.|..+||. ++|...
T Consensus 139 ~i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~ 169 (574)
T 3c8y_A 139 SLTVDRTKCLLCGRCVNACGKNTETYAMKFL 169 (574)
T ss_dssp SEEEEGGGCCCCCHHHHHHHHHHSCCCSEEE
T ss_pred cceeCcccCcCCCCccchhCchhcCCceeec
Confidence 799999999999999999997 888764
No 246
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=81.60 E-value=0.75 Score=48.51 Aligned_cols=72 Identities=8% Similarity=0.171 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEc---CC-CcEEEEEeCCccccCCC-CCccCCCCceEEEE-cEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYD---AD-NKVIGIGTNDMGIAKDG-SKKENFQRGVELRG-RITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~---~~-g~v~gV~t~~~g~~~~G-~~~~~~~~g~~i~A-k~vI~AdG~~s~ 87 (442)
....+|.....+.+++|++++.|+.|+++ ++ ++++||+..+ .+| + ..+++| |-||+|.|+-.+
T Consensus 209 a~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~----~~g~~-------~~~v~A~kEVILsAGai~S 277 (566)
T 3fim_B 209 SSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE----QEGAP-------TTTVCAKKEVVLSAGSVGT 277 (566)
T ss_dssp HHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES----STTSC-------CEEEEEEEEEEECCHHHHH
T ss_pred HHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE----CCCce-------EEEEEeeeEEEEecCCcCC
Confidence 34556655555679999999999999998 22 5789998764 223 2 367899 789999997533
Q ss_pred ccHHHHHhcCC
Q 013495 88 LSEKLIKNFKL 98 (442)
Q Consensus 88 lar~l~~~~gl 98 (442)
-+|+..-|+
T Consensus 278 --PqlL~lSGI 286 (566)
T 3fim_B 278 --PILLQLSGI 286 (566)
T ss_dssp --HHHHHHTTE
T ss_pred --hHHHHhcCC
Confidence 344444454
No 247
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=81.50 E-value=1.5 Score=43.56 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
..+.+.|.+..++.||+++++++|+++.. + +|.+.+ |.++.++.||.|.|....
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~---------------g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEK---------------GNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETT---------------SCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECC---------------CCEEeeeEEEECCCCCcc
Confidence 46778888888999999999999998842 2 255553 468999999999997643
No 248
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.21 E-value=1.3 Score=41.23 Aligned_cols=52 Identities=13% Similarity=-0.067 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.+++.+.+..++.|++++. ++|.++..+ + +|.+.+ +.++.++.||.|.|...
T Consensus 175 ~~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~---~v~~~~---------------g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVET-TRIREIAGH--A---DVVLAD---------------GRSIALAGLFTQPKLRI 226 (297)
T ss_dssp CCCHHHHHHHHHTTCEEEC-SCEEEEETT--E---EEEETT---------------SCEEEESEEEECCEEEC
T ss_pred CCCHHHHHHHHHCCcEEEc-ceeeeeecC--C---eEEeCC---------------CCEEEEEEEEEccCccc
Confidence 3667788888999999996 889888532 2 566653 46899999999999864
No 249
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=80.69 E-value=3.1 Score=41.75 Aligned_cols=50 Identities=14% Similarity=0.009 Sum_probs=35.8
Q ss_pred CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 26 LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 26 ~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.|++|++++.|+++..++++ +.|.+.+. .+|+ ..++.++.||.|+|....
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~--~~v~~~~~---~~g~-------~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQG--IELALRDA---GSGE-------LSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTE--EEEEEEET---TTCC-------EEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCE--EEEEEEEc---CCCC-------eEEEECCEEEEeeCCCCC
Confidence 69999999999999876533 44555421 1332 246999999999997633
No 250
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=80.18 E-value=2 Score=42.91 Aligned_cols=51 Identities=12% Similarity=0.146 Sum_probs=37.9
Q ss_pred HHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 18 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 18 ~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.....+++.|++|+.+++|++|..+++ ..+.|++. +.+++|+.||.|.+..
T Consensus 217 l~~~l~~~lg~~i~~~~~V~~i~~~~~-~~v~v~~~----------------~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 217 VSIRMAEALGDDVFLNAPVRTVKWNES-GATVLADG----------------DIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHGGGEECSCCEEEEEEETT-EEEEEETT----------------TEEEEEEEEEECSCGG
T ss_pred HHHHHHHhcCCcEEcCCceEEEEEeCC-ceEEEEEC----------------CeEEEcCEEEEcCCHH
Confidence 333345567999999999999998763 31346652 3689999999999986
No 251
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=79.72 E-value=1.8 Score=44.06 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=43.8
Q ss_pred HHHHHHHHHHH--------------CCcEEecCCeEeEEEEcCCC-cEEEEEeCCccccC---------CCCCccCCCCc
Q 013495 15 LVRWLGGKAEE--------------LGVEIYPGFAASEILYDADN-KVIGIGTNDMGIAK---------DGSKKENFQRG 70 (442)
Q Consensus 15 fd~~L~~~Ae~--------------~Gvei~~g~~v~~i~~~~~g-~v~gV~t~~~g~~~---------~G~~~~~~~~g 70 (442)
+-+.|.+.+++ .|+++++++.+.++..++++ +|.+|++.++-++. +| .+
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g-------~~ 317 (460)
T 1cjc_A 245 LMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTG-------DV 317 (460)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEE-------EE
T ss_pred HHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCC-------ce
Confidence 34566666766 89999999999999866445 77777765321110 12 12
Q ss_pred eEEEEcEEEeccCCC
Q 013495 71 VELRGRITLLAEGCR 85 (442)
Q Consensus 71 ~~i~Ak~vI~AdG~~ 85 (442)
.++.++.||.|.|.+
T Consensus 318 ~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEECSEEEECCCEE
T ss_pred EEEEcCEEEECCCCC
Confidence 578999999998875
No 252
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=78.78 E-value=2.1 Score=42.48 Aligned_cols=38 Identities=18% Similarity=0.010 Sum_probs=30.7
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHH
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 251 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~ 251 (442)
...|++.++||++.+-++..+ -.+.|+..|+.||+.|.
T Consensus 255 t~~~~IyA~GD~a~~~~~~~~-~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 255 TSIKDIYACGDVAEFYGKNPG-LINIANKQGEVAGLNAC 292 (385)
T ss_dssp CSSTTEEECGGGEEETTBCCC-CHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeeEecCCCccc-HHHHHHHHHHHHHHHhc
Confidence 457999999999998765433 46889999999998875
No 253
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=78.74 E-value=3.2 Score=41.92 Aligned_cols=56 Identities=20% Similarity=0.172 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
+.+.|.+.+++.|++++.++.+. .++ . .+.|.+.+ |+ ..+++++.||+|+|.++.+
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~-~-~v~V~~~~------G~-------~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA-N-TLLVDLND------GG-------TESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS-S-EEEEEETT------SC-------CEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC-C-eEEEEeCC------Cc-------eEEEEcCEEEECCCCCCCC
Confidence 34456677888999999987643 233 2 34455542 21 1579999999999998654
No 254
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=78.26 E-value=2.2 Score=43.44 Aligned_cols=62 Identities=15% Similarity=-0.002 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
++.+.|.+..++.|++++++++|.++..+++ .+.|++.+. ++ .+.++.++.||.|.|.+...
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~~~v~~~~~----~~-------~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKED--GVYVTFEGA----NA-------PKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEETT--EEEEEEESS----SC-------CSSCEEESCEEECCCEEECG
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEcCC--eEEEEEecc----CC-------CceEEEcCEEEECcCCCcCC
Confidence 4556777778889999999999999987643 345655421 11 13468899999999998664
No 255
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=78.01 E-value=3.7 Score=42.27 Aligned_cols=70 Identities=13% Similarity=0.164 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc-ccHHHH
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS-LSEKLI 93 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~-lar~l~ 93 (442)
+-+++.+.-++.||+|+++++|+++. +++.+..+... ||+. .+.+|.|+.||.|.|...+ +...+.
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~------dg~~-----~~~~i~ad~viwa~Gv~~~~~~~~l~ 340 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHE------DGKI-----TEETIPYGTLIWATGNKARPVITDLF 340 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECT------TSCE-----EEEEEECSEEEECCCEECCHHHHHHH
T ss_pred HHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEec------Cccc-----ceeeeccCEEEEccCCcCCHHHHhHH
Confidence 44455555677899999999999984 32333333332 3421 1357999999999997654 334443
Q ss_pred HhcC
Q 013495 94 KNFK 97 (442)
Q Consensus 94 ~~~g 97 (442)
...+
T Consensus 341 ~~~~ 344 (502)
T 4g6h_A 341 KKIP 344 (502)
T ss_dssp HHSG
T ss_pred Hhcc
Confidence 3333
No 256
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=77.99 E-value=1.2 Score=47.84 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=39.1
Q ss_pred HHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 16 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 16 d~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
...|.+.+++.||+|+++++|+++..+ + +.++... +| .+.++.|+.||.|.|..
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~~--~--~~v~~~~-----~~-------~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGAG--G--VTVRDTY-----AS-------IERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEETT--E--EEEEETT-----TC-------CEEEEECSEEEEESCEE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEECC--e--EEEEEcc-----CC-------eEEEEECCEEEECCCCC
Confidence 466778888999999999999998632 2 2333221 11 24689999999999975
No 257
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=77.92 E-value=2.2 Score=40.36 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=30.6
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
..-||+.++||.++.- ..=++.|+..|++||+.|.+.|+
T Consensus 268 Ts~pgIyA~GDv~~~~----~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 268 TSVPGIFAAGDVRDKG----LRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp CSSTTEEECSTTBSCS----CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeecCCCc----chHHHHHHHHHHHHHHHHHHHHH
Confidence 3569999999998631 12378999999999999987664
No 258
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=77.82 E-value=2.7 Score=47.45 Aligned_cols=70 Identities=14% Similarity=0.146 Sum_probs=46.6
Q ss_pred HHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 16 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 16 d~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+.. .+.+++.|+++++++.+.++..++ ++|.+|++.++-.+.+|.....-..+.++.|+.||.|.|....
T Consensus 374 ~~e-~~~~~~~Gv~~~~~~~~~~i~~~~-g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~ 443 (1025)
T 1gte_A 374 PEE-VELAKEEKCEFLPFLSPRKVIVKG-GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLR 443 (1025)
T ss_dssp HHH-HHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECC
T ss_pred HHH-HHHHHHcCCEEEeCCCceEEEccC-CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCC
Confidence 443 367888999999999999998654 7888887653322233421100001247999999999998643
No 259
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=77.77 E-value=4.2 Score=38.31 Aligned_cols=61 Identities=15% Similarity=0.018 Sum_probs=40.0
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
++-.+|-+.+.+++++.+...+....+..+...+++. ..|.+.+ +.++++|.||+|+|++.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~---------------g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL-FEIVTKD---------------HTKYLAERVLLATGMQE 117 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC-EEEEETT---------------CCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc-EEEEECC---------------CCEEEeCEEEEccCCcc
Confidence 3445666666777777665444445566666555443 3465553 46899999999999864
No 260
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=77.31 E-value=3.5 Score=38.68 Aligned_cols=60 Identities=17% Similarity=0.074 Sum_probs=42.1
Q ss_pred HHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 16 VRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 16 d~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+..+.++..+ .|+++++++++.++..++ +.+.+|.+.+. .+|+ ..++.++.||.|.|...
T Consensus 181 ~~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 181 APITLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKNT---ATNE-------KRELVVPGFFIFVGYDV 241 (311)
T ss_dssp CHHHHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEECSEEEECSCEEE
T ss_pred CHHHHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEec---CCCc-------eEEEecCEEEEEecCcc
Confidence 4456666654 799999999999998764 45656766420 1231 24799999999999753
No 261
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=77.29 E-value=2.9 Score=39.42 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=40.4
Q ss_pred HHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 20 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 20 ~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.++.++.|+++++++++.++..++ + +++|.+.+. .+| .+.++.++.||.|.|...
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~-~-~~~v~~~~~---~~g-------~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGED-K-IEQLVLEEV---KGD-------RKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSS-S-CCEEEEEET---TSC-------CEEEEECSEEEECCCEEC
T ss_pred HHHHhcCCeEEEeCceeeEEecCC-c-eEEEEEEec---CCC-------ceEEEECCEEEEeeccCC
Confidence 455788999999999999997654 3 556766531 122 246899999999999754
No 262
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=77.23 E-value=2.3 Score=45.21 Aligned_cols=62 Identities=16% Similarity=0.352 Sum_probs=45.3
Q ss_pred CCcEEecCCeEeEEEEcCC-CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHHHHhcCCc
Q 013495 26 LGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 99 (442)
Q Consensus 26 ~Gvei~~g~~v~~i~~~~~-g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~ 99 (442)
.|++|++++.|++|+.+++ ++++||++.+. ++|+ ..+++|+.||+|.|+.... +++...|+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~---~~g~-------~~~i~A~~VIlaaG~~~s~--~lL~~sgiG 335 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDL---ISGD-------RFEIKADVYVLTAGAVHNT--QLLVNSGFG 335 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEET---TTCC-------EEEECEEEEEECSCTTHHH--HHHHTTTSS
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEc---CCCc-------EEEEECCEEEEcCCCcCCH--HHHHhcCCC
Confidence 4899999999999998753 48899988641 2342 3589999999999976553 344444554
No 263
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=76.63 E-value=1.8 Score=45.59 Aligned_cols=52 Identities=15% Similarity=0.342 Sum_probs=39.4
Q ss_pred HCCcEEecCCeEeEEEEcC-CCcEEEEEeCCccccCCCCCccCCCCceEEEE-cEEEeccCCCCc
Q 013495 25 ELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGS 87 (442)
Q Consensus 25 ~~Gvei~~g~~v~~i~~~~-~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~A-k~vI~AdG~~s~ 87 (442)
+.+++|++++.|++|++++ +++++||+..+ .+|+ ..+++| |-||+|.|+-.+
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----~~g~-------~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVT----AAGN-------ELNFFADREVILSQGVFET 271 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEE----TTSC-------EEEEEEEEEEEECSHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----CCCc-------EEEEEeeeEEEEcccccCC
Confidence 3468889999999999984 37899999864 2342 357889 679999997543
No 264
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.00 E-value=2.4 Score=42.90 Aligned_cols=59 Identities=19% Similarity=0.226 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
..+.+.|.+..++.|++++++++|.++.. + + +.|.+. +|+ ..++.++.||.|.|.+...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~--v~v~~~------~G~-------~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN-G-C--LLANDG------KGG-------QLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET-T-E--EEEECS------SSC-------CCEECCSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-C--EEEEEC------CCc-------eEEEECCEEEECcCCCcCC
Confidence 35667788888899999999999999864 2 2 344421 231 2579999999999987664
No 265
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=75.85 E-value=4.5 Score=41.41 Aligned_cols=55 Identities=7% Similarity=0.044 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHCC-cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 15 LVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 15 fd~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+...+..-|+.++ ++|+.+++|++|..++++ .+.|++.+ |.+++|+.||.|.+..
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~-~v~v~~~~---------------g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSK-NVTVNCED---------------GTVYNADYVIITVPQS 256 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTS-CEEEEETT---------------SCEEEEEEEEECCCHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCC-eEEEEECC---------------CcEEECCEEEECCCHH
Confidence 5555544555553 679999999999986423 36787764 4579999999998764
No 266
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=75.57 E-value=4.9 Score=39.66 Aligned_cols=53 Identities=15% Similarity=0.067 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.+.....+++.+.+|+.+++|++|..++ +.| .|++.+ | +++|+.||.|.+..
T Consensus 205 ~~~l~~~l~~~l~~~v~~~~~V~~i~~~~-~~v-~v~~~~---------------g-~~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 205 TQAMFEHLNATLEHPAERNVDITRITRED-GKV-HIHTTD---------------W-DRESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHHSSSCCBCSCCEEEEECCT-TCE-EEEESS---------------C-EEEESEEEECSCHH
T ss_pred HHHHHHHHHHhhcceEEcCCEEEEEEEEC-CEE-EEEECC---------------C-eEEcCEEEECCCHH
Confidence 44444445667788999999999998876 444 377653 3 58999999999985
No 267
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=75.55 E-value=0.62 Score=46.75 Aligned_cols=27 Identities=15% Similarity=0.038 Sum_probs=23.5
Q ss_pred eEEEecCCCc---cCCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCL---HCKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci---~Cg~C~~~cp~~~I~w~ 429 (442)
.+.||.+.|. +|+.|+.+||++||+|.
T Consensus 210 ~p~id~e~~~~~Ce~~~cv~~CPt~AI~~~ 239 (386)
T 3or1_B 210 PPMIDHENLAELCEIPLAVAACPTAAVKPI 239 (386)
T ss_dssp CCCCCTTTHHHHCCHHHHHHHCTTCCEEEE
T ss_pred cceechhhhcccccchhhhhhCchhhcccc
Confidence 5788999876 55999999999999996
No 268
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=75.50 E-value=4.3 Score=38.41 Aligned_cols=59 Identities=19% Similarity=0.111 Sum_probs=42.4
Q ss_pred HHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 16 VRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 16 d~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+..+.+++.+ .|++|+++++++++..+ +.+.+|++.+. .+|+ ..++.++.||.|.|...
T Consensus 190 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 190 NKVAQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRNL---KTGE-------VSELATDGVFIFIGHVP 249 (325)
T ss_dssp CHHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCC-------EEEEECSEEEECSCEEE
T ss_pred chHHHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEEC---CCCc-------EEEEEcCEEEEccCCCC
Confidence 4556666665 69999999999999864 56667776520 1332 24799999999999753
No 269
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=75.32 E-value=0.86 Score=49.96 Aligned_cols=27 Identities=19% Similarity=0.515 Sum_probs=23.0
Q ss_pred eEEEecCCCccCCcccccC----CCCCeeEE
Q 013495 403 KLQINAQNCLHCKACDIKD----PKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~Cg~C~~~c----p~~~I~w~ 429 (442)
.+.+|.++|++||.|+.+| |..+|...
T Consensus 173 ~i~~d~~~CI~C~~Cv~~C~~~~~~~~i~~~ 203 (783)
T 3i9v_3 173 FVILDRERCIHCKRCVRYFEEVPGDEVLDFI 203 (783)
T ss_dssp TEEECTTTCCCCCHHHHHHHHTTCCCCCEEC
T ss_pred cEEEchhhCCCccHHHHHhhhhcCCceeeee
Confidence 5888999999999999999 77777543
No 270
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=74.97 E-value=3 Score=39.12 Aligned_cols=59 Identities=15% Similarity=0.251 Sum_probs=42.8
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
++-.++-+.+.+.+++.++++.... +.....+.+. ..+.+.+ +.+++++.||+|+|++.
T Consensus 63 i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~--~~~~~~~---------------~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQP--FKLFTEE---------------GKEVLTKSVIIATGATA 121 (314)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS--EEEEETT---------------CCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc--eEEEECC---------------CeEEEEeEEEEcccccc
Confidence 5667888889999999999998764 5555444322 3344442 46899999999999764
No 271
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=74.96 E-value=2.5 Score=42.45 Aligned_cols=40 Identities=18% Similarity=0.040 Sum_probs=32.7
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++..+|.++. =+..|+..|+.||+.|..
T Consensus 274 ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 274 TSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCG 318 (431)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcC
Confidence 3568999999999988776542 468999999999998863
No 272
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=74.94 E-value=0.44 Score=47.43 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=23.9
Q ss_pred eEEEecCCC-ccC--CcccccCCCCCeeEEC
Q 013495 403 KLQINAQNC-LHC--KACDIKDPKQNIKWTV 430 (442)
Q Consensus 403 ~~~i~~~~C-i~C--g~C~~~cp~~~I~w~~ 430 (442)
.+.||.+.| ..| +.|+.+||++||+|..
T Consensus 199 ~p~id~~~c~~~Ce~~~Cv~~CP~~AI~~~~ 229 (366)
T 3mm5_B 199 PPIPNDEAIRKTCEIPSTVAACPTGALKPDM 229 (366)
T ss_dssp CCCCCHHHHHHHCCHHHHHHTCTTCCEEEET
T ss_pred ceEEcchhccccccccchhccCCccceEecC
Confidence 578899888 456 9999999999999973
No 273
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=74.33 E-value=1.3 Score=45.28 Aligned_cols=66 Identities=20% Similarity=0.212 Sum_probs=41.9
Q ss_pred HHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccc---cCCCCCccCCCC--ceEEEEcEEEeccCCCCc
Q 013495 20 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGI---AKDGSKKENFQR--GVELRGRITLLAEGCRGS 87 (442)
Q Consensus 20 ~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~---~~~G~~~~~~~~--g~~i~Ak~vI~AdG~~s~ 87 (442)
.+.+++.|+++++++.+.++.. +|+|.+|++.++-+ +.+|+....... +.++.|+.||.|.|....
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECC
T ss_pred HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCC
Confidence 4568889999999999998874 36665555432111 123332111111 257999999999998643
No 274
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.11 E-value=3.6 Score=41.54 Aligned_cols=34 Identities=24% Similarity=0.082 Sum_probs=27.6
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..|++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 308 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 308 NVSGVYAIGDVIPGP-----MLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp SSTTEEECSTTSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 458999999999842 2357899999999999864
No 275
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=73.42 E-value=4.9 Score=40.35 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHHH
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLI 93 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~ 93 (442)
.+-+.|.+..++. +++++++.|.++..++ .+..|.+. +.++.++.||.|.|..... .++
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~~----------------g~~i~~D~Vv~a~G~~p~~--~l~ 249 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVTD----------------AGEYKAELVILATGIKPNI--ELA 249 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEET----------------TEEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEeC----------------CCEEECCEEEEeeCCccCH--HHH
Confidence 3445666666777 9999999999986543 44445433 3689999999999997553 234
Q ss_pred HhcCCc
Q 013495 94 KNFKLR 99 (442)
Q Consensus 94 ~~~gl~ 99 (442)
+..|+.
T Consensus 250 ~~~gl~ 255 (449)
T 3kd9_A 250 KQLGVR 255 (449)
T ss_dssp HHTTCC
T ss_pred HhCCcc
Confidence 455664
No 276
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=73.35 E-value=7.4 Score=39.57 Aligned_cols=64 Identities=19% Similarity=0.126 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++.|+++++++.+.++...+++. +.|.+.+. .+|+ ..++.++.||.|.|.....
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~---~~g~-------~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDH---ASGK-------EDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSC-EEEEEEET---TTTE-------EEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeC---CCCe-------eEEEECCEEEEcccCCccc
Confidence 456777788889999999999999998755443 34554320 1121 1368999999999986543
No 277
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=73.01 E-value=5.6 Score=37.61 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=41.4
Q ss_pred HHHHHHH-HHCCcEEecCCeEeEEEEcCCC-cEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 17 RWLGGKA-EELGVEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 17 ~~L~~~A-e~~Gvei~~g~~v~~i~~~~~g-~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.+.+++ ++.|+++++++++.++..++++ .+.+|.+.+. .+|+ +.++.++.||.|.|..
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---VTGD-------VSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---TTCC-------EEEEECSEEEECSCEE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec---CCCc-------eEEEecCEEEEEeCCc
Confidence 4455444 5689999999999999876421 6666766520 1231 3689999999999975
No 278
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=72.45 E-value=5.4 Score=43.61 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=39.8
Q ss_pred EEehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCC
Q 013495 9 RKSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 84 (442)
Q Consensus 9 ~v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~ 84 (442)
.+-+..+...+... ..|++|+.+++|++|..++++ +.|++.+ |.+++|+.||.|...
T Consensus 527 ~~~~~G~~~l~~aL--a~gl~I~l~t~V~~I~~~~~~--v~V~~~~---------------G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 527 TLLTPGYSVIIEKL--AEGLDIQLKSPVQCIDYSGDE--VQVTTTD---------------GTGYSAQKVLVTVPL 583 (776)
T ss_dssp EECTTCTHHHHHHH--HTTSCEESSCCEEEEECSSSS--EEEEETT---------------CCEEEESEEEECCCH
T ss_pred EEECChHHHHHHHH--HhCCcEEcCCeeEEEEEcCCE--EEEEECC---------------CcEEEcCEEEECCCH
Confidence 33344444444333 358899999999999987644 3477653 458999999999954
No 279
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=72.13 E-value=10 Score=38.69 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+-+.|.+..++. ++|+++++|.++..+++ .+ .|.+.+ .+|+ ..++.++.||.|.|.....
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~-~v-~v~~~~----~~G~-------~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEKED-AV-EVIYFD----KSGQ-------KTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEECSS-SE-EEEEEC----TTCC-------EEEEEESEEEECSCCEESC
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEcCC-EE-EEEEEe----CCCc-------eEEEECCEEEEeeCCccCC
Confidence 4455555665666 99999999999987763 33 355431 2232 2689999999999997553
No 280
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=72.08 E-value=1.2 Score=39.06 Aligned_cols=27 Identities=15% Similarity=0.131 Sum_probs=23.1
Q ss_pred ecCCCCCcccCCCCCccccccccccceEEEecC
Q 013495 365 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPD 397 (442)
Q Consensus 365 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~ 397 (442)
..|.+.|..| +.|+.+||.+++++...
T Consensus 40 ~~d~~~C~~C------g~Cv~~CP~~Ai~~~~~ 66 (166)
T 3gyx_B 40 NQEPEACWEC------YSCIKICPQGAITARPY 66 (166)
T ss_dssp ESCGGGCCCC------CHHHHHCSSCCEEECCC
T ss_pred ecCcccCccc------ChHhHhCCccceEEecc
Confidence 4578899998 79999999999998653
No 281
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=71.98 E-value=3.9 Score=41.42 Aligned_cols=35 Identities=23% Similarity=0.114 Sum_probs=28.1
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .=.+.|+..|..||+.|..
T Consensus 315 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 315 SKFPHIKVVGDVTFGP-----MLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeccCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 3468999999999852 2357999999999998874
No 282
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=71.85 E-value=1.3 Score=38.26 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=22.6
Q ss_pred ecCCCCCcccCCCCCccccccccccceEEEec
Q 013495 365 LRDPKIPELVNLPEYAGPESRYCPARVYEYVP 396 (442)
Q Consensus 365 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~ 396 (442)
+.|.+.|..| +.|+.+||.+++++..
T Consensus 41 ~id~~~C~~C------g~Cv~~CP~~AI~~~~ 66 (150)
T 1jnr_B 41 NREPDMCWEC------YSCVKMCPQGAIDVRG 66 (150)
T ss_dssp ESCGGGCCCC------CHHHHHCTTCCEEECC
T ss_pred eeCcccCcCH------hHHHHhCCccceEecC
Confidence 4578899998 7999999999999864
No 283
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=71.80 E-value=7.2 Score=40.66 Aligned_cols=58 Identities=21% Similarity=0.137 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCccc
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 89 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~la 89 (442)
+-+.|.+..++.|+++++++.+.++..++ +. +.|.+.+ +.++.++.|+.|.|++..+.
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~-~~v~~~~---------------~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKMD-DK-ILVEFSD---------------KTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEET-TE-EEEEETT---------------SCEEEESEEEECSCEEESCG
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEecC-Ce-EEEEEcC---------------CCeEEEEEEEEcccccCCcc
Confidence 34556667788999999999999998876 33 4466553 35788999999999987653
No 284
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=69.58 E-value=5.5 Score=39.04 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHH----HHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 12 LSQLVRWLGGKA----EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 12 R~~fd~~L~~~A----e~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
...|+..+.+.+ ++.|+++++++++..+..+.++ ..|.+.+ |.++.+++||.|.|....
T Consensus 197 ~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~---------------g~~i~~D~vi~~~g~~~~ 259 (401)
T 3vrd_B 197 QAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA--MTVETSF---------------GETFKAAVINLIPPQRAG 259 (401)
T ss_dssp HHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT--TEEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred cccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc--eEEEcCC---------------CcEEEeeEEEEecCcCCc
Confidence 456777776655 4689999999999988776544 3466654 578999999999987643
Q ss_pred ccHHHHHhcCCc
Q 013495 88 LSEKLIKNFKLR 99 (442)
Q Consensus 88 lar~l~~~~gl~ 99 (442)
.+++..+|.
T Consensus 260 ---~~~~~~gl~ 268 (401)
T 3vrd_B 260 ---KIAQSASLT 268 (401)
T ss_dssp ---HHHHHTTCC
T ss_pred ---hhHhhcccc
Confidence 344444553
No 285
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=69.48 E-value=1.1 Score=41.87 Aligned_cols=19 Identities=21% Similarity=0.581 Sum_probs=16.6
Q ss_pred ecCCCccCCcccccCCCCC
Q 013495 407 NAQNCLHCKACDIKDPKQN 425 (442)
Q Consensus 407 ~~~~Ci~Cg~C~~~cp~~~ 425 (442)
+...|++||.|..+||..+
T Consensus 154 ~~~~Ci~CG~C~~~CP~~~ 172 (252)
T 2h88_B 154 GLYECILCACCSTSCPSYW 172 (252)
T ss_dssp TTTTCCCCCTTGGGCHHHH
T ss_pred hHHhchhhCcchhhCCCCc
Confidence 4679999999999999765
No 286
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=68.23 E-value=6.5 Score=40.52 Aligned_cols=59 Identities=20% Similarity=0.168 Sum_probs=43.3
Q ss_pred HHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 16 VRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 16 d~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
|+.|.++.++ .|+++++++.++++..++ +++.+|++.+. .+|+ ..++.++.||.|.|..
T Consensus 393 ~~~l~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 393 DQVLQDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD-------IHSVALAGIFVQIGLL 452 (521)
T ss_dssp CHHHHHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEET---TTCC-------EEEEECSEEEECCCEE
T ss_pred CHHHHHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeC---CCCc-------eEEEEcCEEEECcCCC
Confidence 4566677777 599999999999998654 67778877531 1231 2578999999999864
No 287
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=68.21 E-value=1.3 Score=41.03 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=17.7
Q ss_pred EecCCCccCCcccccCCCCCe
Q 013495 406 INAQNCLHCKACDIKDPKQNI 426 (442)
Q Consensus 406 i~~~~Ci~Cg~C~~~cp~~~I 426 (442)
.+..+|++||.|..+||...+
T Consensus 144 ~~~~~Ci~Cg~C~~~CP~~~~ 164 (238)
T 2wdq_B 144 DGLYECILCACCSTSCPSFWW 164 (238)
T ss_dssp TTTTTCCCCCTTGGGCHHHHH
T ss_pred hccccccccCCchhhCcCCcc
Confidence 357899999999999997654
No 288
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=68.06 E-value=0.35 Score=45.00 Aligned_cols=20 Identities=15% Similarity=0.492 Sum_probs=17.6
Q ss_pred ecCCCccCCcccccCCCCCe
Q 013495 407 NAQNCLHCKACDIKDPKQNI 426 (442)
Q Consensus 407 ~~~~Ci~Cg~C~~~cp~~~I 426 (442)
+...|++||.|..+||..++
T Consensus 147 ~~~~Ci~Cg~C~~~CP~~~~ 166 (241)
T 2bs2_B 147 ELDRCIECGCCIAACGTKIM 166 (241)
T ss_dssp HHHTCCCCCHHHHTCHHHHH
T ss_pred hhhhhhccCcCcccCCCCcc
Confidence 46799999999999998775
No 289
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=67.97 E-value=15 Score=34.20 Aligned_cols=40 Identities=20% Similarity=0.046 Sum_probs=30.8
Q ss_pred ccccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 212 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 212 ~~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
+..-||+.++||+++.. . +=+..|+.+|.+||..|.+.|+
T Consensus 273 ~Ts~pgIyA~GDv~~~~--~--~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDRV--Y--RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp BCSSTTEEECSTTTCSS--C--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEeccCCc--c--hHHHHHHHHHHHHHHHHHHHHh
Confidence 34569999999998742 1 1267899999999999987764
No 290
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=67.66 E-value=7.7 Score=37.16 Aligned_cols=50 Identities=14% Similarity=-0.093 Sum_probs=34.3
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhccC---chHHHHHH
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED---SNMEIYWD 265 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~~---~~l~~Y~~ 265 (442)
.|++.++||++...++.. ..++.|...|..+|+.+...+... +.+..|+.
T Consensus 300 ~~~v~a~GD~~~~~~~~~-~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~~ 352 (369)
T 3d1c_A 300 YPNIFMIGATVENDNAKL-CYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQK 352 (369)
T ss_dssp STTEEECSTTCCCSSCCC-CSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCeEEeccccccCCeeE-EEEehhhHHHHHHHHHHhcccCCCCcchHHHHHHh
Confidence 378999999998876544 367777777888888887655432 24455543
No 291
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=67.35 E-value=5.1 Score=40.70 Aligned_cols=35 Identities=31% Similarity=0.271 Sum_probs=28.3
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 314 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 314 TNVPHIYAIGDIVGQP-----MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CSSTTEEECGGGTCSS-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEcccCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 3568999999999842 2357899999999999874
No 292
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=65.65 E-value=7.5 Score=39.04 Aligned_cols=54 Identities=26% Similarity=0.233 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCc-eEEEEcEEEeccCCCCcc
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRG-VELRGRITLLAEGCRGSL 88 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g-~~i~Ak~vI~AdG~~s~l 88 (442)
+.+.|.+.+++.|++++.++.+. + ++ + .+.|.+.+ | .+++++.+|+|+|.+...
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~-i--d~-~-~v~V~~~~---------------G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF-V--DA-N-TVRVVNGD---------------SAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE-E--ET-T-EEEEEETT---------------EEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-c--cC-C-eEEEEeCC---------------CcEEEEeCEEEEecCCCCCC
Confidence 33445667778999999997653 2 33 3 24565542 3 579999999999986543
No 293
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=64.60 E-value=5.4 Score=39.91 Aligned_cols=56 Identities=18% Similarity=0.219 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.-++|.+.-++.|++++++++|+++. + +.+ .+.. .+| .+.++.++.||.|.|.+.+
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~-~~~-~~~~------~~g-------~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--P-DKV-IYED------LNG-------NTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--S-SEE-EEEC------TTS-------CEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--C-Cce-EEEe------eCC-------CceEeecceEEEeccCCCc
Confidence 34566667788999999999999983 3 222 2322 223 2468999999999998754
No 294
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=64.56 E-value=4.7 Score=40.78 Aligned_cols=58 Identities=7% Similarity=-0.016 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccH
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSE 90 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar 90 (442)
..+-+.|++..++.|++|+.+++|++|..++ +. |++.+ |.++.|+.||.+ ..-..+++
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~~---v~~~~---------------G~~~~ad~vI~t-~P~~~l~~ 279 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANN-KT---VTLQD---------------GTTIGYKKLVST-MAVDFLAE 279 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTT-TE---EEETT---------------SCEEEEEEEEEC-SCHHHHHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccC-CE---EEEcC---------------CCEEECCEEEEC-CCHHHHHH
Confidence 4566777888888899999999999998765 43 44443 578999999965 33333333
No 295
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=64.40 E-value=12 Score=38.43 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEcCCC--cEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYDADN--KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g--~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
++-+.|.+..++.|++|++++++.++...+++ ..+.|.... .+|+ ...++.++.||.|.|....
T Consensus 251 ~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~----~~g~------~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 251 DMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS----TNSE------EIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEE----SSSS------CEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEE----CCCc------EEEEEECCEEEEecCCccc
Confidence 56667777788999999999988888654321 222343321 1221 0146789999999998643
No 296
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=63.85 E-value=1.2 Score=41.43 Aligned_cols=21 Identities=19% Similarity=0.564 Sum_probs=18.0
Q ss_pred EecCCCccCCcccccCCCCCe
Q 013495 406 INAQNCLHCKACDIKDPKQNI 426 (442)
Q Consensus 406 i~~~~Ci~Cg~C~~~cp~~~I 426 (442)
.+.++|++||.|..+||..++
T Consensus 143 ~~~~~Ci~Cg~C~~~CP~~~~ 163 (243)
T 1kf6_B 143 HQFSGCINCGLCYAACPQFGL 163 (243)
T ss_dssp GGGGCCCCCCHHHHHCHHHHH
T ss_pred hhhhhccccCccccccCCCcc
Confidence 467899999999999997664
No 297
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=63.83 E-value=3.9 Score=40.95 Aligned_cols=43 Identities=14% Similarity=-0.112 Sum_probs=34.8
Q ss_pred ccCCEEEEccCCCcccCc-------ccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 214 VFPGGAIIGCAAGFLNVP-------KIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~-------~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
..|++..+||+++.-++- ..+=.+.|+..|..||+.|...|.+
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g 345 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEG 345 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 579999999999987531 2234678999999999999988865
No 298
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=62.89 E-value=1.4 Score=44.62 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=22.7
Q ss_pred eEEEecCCCcc-------CCcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLH-------CKACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~-------Cg~C~~~cp~~~I~w~ 429 (442)
.+.||.+.|.. |+.|+.+||++||+|.
T Consensus 242 ~~~iD~e~~~~~~~gc~i~~~cv~~CPt~Ai~~~ 275 (418)
T 3mm5_A 242 DIKVDQEAVKEYASWMDIENEVVKLCPTGAIKWD 275 (418)
T ss_dssp CCEECHHHHHHHHTTSCHHHHTGGGCTTCCEEEC
T ss_pred cccccHHHHhhhccccccCccccccCCccccccC
Confidence 57889877665 4889999999999996
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=62.25 E-value=7.1 Score=38.90 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+.+.|.+..++.||+++++++|+++.. ++ |++.+. ++ .+.++.++.||.|.|..+.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~----v~~~~~----~~-------~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP--DK----VIYEDL----NG-------NTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS--SE----EEEECT----TS-------CEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce----EEEEec----CC-------CceEEeeeEEEECCCCccc
Confidence 567788888999999999999999842 22 333321 11 2478999999999997643
No 300
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=61.83 E-value=6.2 Score=35.76 Aligned_cols=36 Identities=17% Similarity=0.031 Sum_probs=28.2
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
...||+.++||+| . .. =...||.+|+.||+.|.+.|
T Consensus 196 t~~p~iya~G~~a-~-~g----~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV-R-EG----DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT-S-CC----CHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc-c-Cc----cHHHHHHHHHHHHHHHHhhc
Confidence 4679999999999 3 22 22257899999999998765
No 301
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=60.85 E-value=4.6 Score=41.47 Aligned_cols=45 Identities=11% Similarity=-0.224 Sum_probs=35.3
Q ss_pred ccccCC-EEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 212 YPVFPG-GAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 212 ~~~~~g-~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
++..++ ++|+||||.-.-|+.++|+..+|.++.-+|..+...+.+
T Consensus 389 ~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~~g 434 (497)
T 2bry_A 389 KHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEG 434 (497)
T ss_dssp ETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHhCC
Confidence 445566 999999994233339999999999999999988877654
No 302
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=60.24 E-value=4 Score=42.78 Aligned_cols=36 Identities=28% Similarity=0.215 Sum_probs=32.8
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
.-+|+..+||.||. ..||-.|..+|+.+||+|+..+
T Consensus 507 ~~~gly~~GegaG~-----a~gi~~Aa~~G~~~a~~i~~~~ 542 (549)
T 3nlc_A 507 NLKGFYPAGEGAGY-----AGGILSAGIDGIKVAEAVARDI 542 (549)
T ss_dssp TCBTEEECHHHHTS-----CCSHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCCh-----hhHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999997 6899999999999999998765
No 303
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=60.17 E-value=2.4 Score=40.57 Aligned_cols=18 Identities=22% Similarity=0.602 Sum_probs=15.4
Q ss_pred cCCCccCCcccccCCCCC
Q 013495 408 AQNCLHCKACDIKDPKQN 425 (442)
Q Consensus 408 ~~~Ci~Cg~C~~~cp~~~ 425 (442)
...||+||.|..+||.-.
T Consensus 179 ~~~CI~CG~C~~aCP~~~ 196 (282)
T 3vr8_B 179 LYECILCACCSASCPSYW 196 (282)
T ss_pred hhhCcccCcCcccCCcee
Confidence 457999999999999654
No 304
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=58.84 E-value=10 Score=38.64 Aligned_cols=39 Identities=26% Similarity=0.365 Sum_probs=32.4
Q ss_pred ccCCEEEEccCCCcccCccc-----ccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKI-----KGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g-----~GI~~Am~SG~lAAeai~~ 252 (442)
..|++.++||+++..++.++ +=.+.|+..|+.||+.|..
T Consensus 317 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 317 SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 46899999999998876655 3478999999999998863
No 305
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=58.81 E-value=8.4 Score=38.68 Aligned_cols=52 Identities=8% Similarity=-0.015 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 15 LVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 15 fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+-+.+.+..++.|++++++++|.++. +. .|.+.+ +.++.++.||.|.|....
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~----~~--~v~~~~---------------g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAIN----GN--EITFKS---------------GKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEE----TT--EEEETT---------------SCEEECSEEEECCCEEES
T ss_pred hHHHHHHHhhccceEEEeccEEEEec----CC--eeeecC---------------CeEEeeeeEEEEeceecC
Confidence 44567777788999999999998874 22 255543 468999999999997643
No 306
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=58.63 E-value=8.6 Score=38.88 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=30.8
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
.+|+.++|++.. +-|++-|+.||+.||+.|.+.+..
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 479999999864 458999999999999999887754
No 307
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=58.41 E-value=6.9 Score=39.68 Aligned_cols=67 Identities=24% Similarity=0.223 Sum_probs=40.8
Q ss_pred HHHHHHHHHH------CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCC--CccCCCCc--eEEEEcEEEeccCCC
Q 013495 16 VRWLGGKAEE------LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS--KKENFQRG--VELRGRITLLAEGCR 85 (442)
Q Consensus 16 d~~L~~~Ae~------~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~--~~~~~~~g--~~i~Ak~vI~AdG~~ 85 (442)
.+.|.+.+++ .|+++++++++.++..+ +.|.+|++.++-++.+|. .... ..| .++.++.||.|.|..
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~-~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAK-DTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEE-EEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCccccccc-CCCceEEEEcCEEEEccccc
Confidence 4566666766 79999999999998743 556666654211111110 0000 012 468999999998875
No 308
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=58.11 E-value=17 Score=36.61 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=28.2
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .-.+.|+..|+.||+.|..
T Consensus 310 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 310 TKIPNIYAIGDVVAGP-----MLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeecCCCC-----ccHHHHHHHHHHHHHHhcC
Confidence 3468999999999842 2357899999999999864
No 309
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=58.02 E-value=8.2 Score=36.68 Aligned_cols=40 Identities=28% Similarity=0.144 Sum_probs=32.1
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
...|++.++||+++.- ..-+..|+.+|..||..|...|.+
T Consensus 278 t~~~~iya~GD~~~~~----~~~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 278 TSLPGVFAAGDLVDRT----YRQAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp CSSTTEEECGGGTCCS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCcc----HHHHHHHHHhHHHHHHHHHHHhhc
Confidence 3568999999999852 235788999999999999877643
No 310
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=57.29 E-value=5.9 Score=37.25 Aligned_cols=39 Identities=18% Similarity=-0.054 Sum_probs=30.1
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
..-||+.++||.++. |+ .=+..|+.+|..||.+|.+.|.
T Consensus 262 Ts~p~IyA~GDv~~~--~~--~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 262 TSEKNIYLAGETTTQ--GP--SSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp CSSTTEEECSHHHHT--SC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeccCCC--cc--hHHHHHHHHHHHHHHHHHHHHh
Confidence 356999999998863 11 1267899999999999987763
No 311
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=57.13 E-value=9.1 Score=38.71 Aligned_cols=64 Identities=9% Similarity=0.010 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHCC-cEEecCCeEeEEEEcCCCc----EEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 12 LSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNK----VIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 12 R~~fd~~L~~~Ae~~G-vei~~g~~v~~i~~~~~g~----v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.-+.+....-++++| ++|+.+++|++|..++++. ++.|++.+ .+|+. ..+++|+.||.|....
T Consensus 239 ~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~----~~g~~------~~~~~ad~VI~a~p~~ 307 (504)
T 1sez_A 239 LGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISAS----PHKRQ------SEEESFDAVIMTAPLC 307 (504)
T ss_dssp TTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBC----SSSSC------BCCCEESEEEECSCHH
T ss_pred CcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcC----CCCcc------ceeEECCEEEECCCHH
Confidence 3334444444455677 8999999999999887552 25566542 12210 0468999999998864
No 312
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=57.10 E-value=8 Score=39.48 Aligned_cols=71 Identities=17% Similarity=0.274 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHH-HCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHH
Q 013495 13 SQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEK 91 (442)
Q Consensus 13 ~~fd~~L~~~Ae-~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~ 91 (442)
+....++...++ ..+..|++++.|..++.++ ++++||.... +++ ..+++||-||+|.|+-.+ -+
T Consensus 210 s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~----~~~--------~~~~~a~~VILsAGai~S--P~ 274 (526)
T 3t37_A 210 TAADAWLTKAVRGRKNLTILTGSRVRRLKLEG-NQVRSLEVVG----RQG--------SAEVFADQIVLCAGALES--PA 274 (526)
T ss_dssp CHHHHHSCHHHHTCTTEEEECSCEEEEEEEET-TEEEEEEEEE----TTE--------EEEEEEEEEEECSHHHHH--HH
T ss_pred ccccccccccccCCCCeEEEeCCEEEEEEecC-CeEEEEEEEe----cCc--------eEEEeecceEEcccccCC--cc
Confidence 344455544443 4579999999999999987 7889998763 222 357899999999997433 34
Q ss_pred HHHhcCC
Q 013495 92 LIKNFKL 98 (442)
Q Consensus 92 l~~~~gl 98 (442)
|+..-|+
T Consensus 275 LLl~SGi 281 (526)
T 3t37_A 275 LLMRSGI 281 (526)
T ss_dssp HHHHTTE
T ss_pred hhhhccC
Confidence 4444444
No 313
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=55.98 E-value=10 Score=42.44 Aligned_cols=60 Identities=15% Similarity=0.228 Sum_probs=43.3
Q ss_pred HHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccC---CCCCccCCCCceEEEEcEEEeccCCCCcc
Q 013495 20 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK---DGSKKENFQRGVELRGRITLLAEGCRGSL 88 (442)
Q Consensus 20 ~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~---~G~~~~~~~~g~~i~Ak~vI~AdG~~s~l 88 (442)
.+++++.|++|++++.|.++..++++++.+|++.++ +. +| .+.++.++.||.|.|.....
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~--~~~~~~G-------~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAEL--DEARELG-------GTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEE--CTTCCEE-------EEEEEECSEEEEECCEEECC
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEec--cccCCCC-------ceEEEEcCEEEECCCcCcCh
Confidence 566788999999999999998742356777776531 01 12 12689999999999986553
No 314
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=55.67 E-value=25 Score=36.60 Aligned_cols=62 Identities=19% Similarity=0.152 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHCCcEEecCCeEeEEEEc-----CC---CcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 14 QLVRWLGGKAEELGVEIYPGFAASEILYD-----AD---NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 14 ~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~-----~~---g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.+-+.+.+..++.|+++++++.+.++... ++ +.+ .|.... .+|+ ..++.++.||.|.|..
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~----~~g~-------~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHY----TDGK-------KFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEE----TTSC-------EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEe----CCCc-------EEeccCCEEEEEeCCc
Confidence 45556667777899999999988887542 11 322 232210 1231 1345599999999987
Q ss_pred Cc
Q 013495 86 GS 87 (442)
Q Consensus 86 s~ 87 (442)
..
T Consensus 395 p~ 396 (598)
T 2x8g_A 395 PQ 396 (598)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 315
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=55.43 E-value=13 Score=37.55 Aligned_cols=70 Identities=19% Similarity=0.136 Sum_probs=45.2
Q ss_pred HHHHHHHHHH-CCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH-H
Q 013495 16 VRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL-I 93 (442)
Q Consensus 16 d~~L~~~Ae~-~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l-~ 93 (442)
|.-+.+..++ +.++++++++|.++..++++. +.|.+.+ .+|+ ..++.++.||.|.|.+.... | +
T Consensus 213 d~~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~-v~v~~~~----~~G~-------~~~i~~D~vi~a~G~~p~~~--l~l 278 (466)
T 3l8k_A 213 DQDIVNTLLSILKLNIKFNSPVTEVKKIKDDE-YEVIYST----KDGS-------KKSIFTNSVVLAAGRRPVIP--EGA 278 (466)
T ss_dssp CHHHHHHHHHHHCCCEECSCCEEEEEEEETTE-EEEEECC----TTSC-------CEEEEESCEEECCCEEECCC--TTT
T ss_pred CHHHHHHHHhcCEEEEEECCEEEEEEEcCCCc-EEEEEEe----cCCc-------eEEEEcCEEEECcCCCcccc--cch
Confidence 5555555443 359999999999998754233 3465542 1332 24899999999999987654 3 3
Q ss_pred HhcCCc
Q 013495 94 KNFKLR 99 (442)
Q Consensus 94 ~~~gl~ 99 (442)
+..|+.
T Consensus 279 ~~~gl~ 284 (466)
T 3l8k_A 279 REIGLS 284 (466)
T ss_dssp GGGTCC
T ss_pred hhcCce
Confidence 344554
No 316
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.13 E-value=8 Score=37.81 Aligned_cols=38 Identities=16% Similarity=0.058 Sum_probs=28.6
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHH
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 251 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~ 251 (442)
...|++.++||++...++. ..=.+.|+..|+.||+.|.
T Consensus 258 t~~~~IyA~GD~a~~~~~~-~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 258 TSAKDVYAIGDCAEYSGII-AGTAKAAMEQARVLADILK 295 (367)
T ss_dssp CSSTTEEECGGGEEBTTBC-CCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeEeeeecCCCC-ccHHHHHHHHHHHHHHHhc
Confidence 3568999999999764432 1236789999999998875
No 317
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=54.35 E-value=18 Score=36.23 Aligned_cols=53 Identities=8% Similarity=0.020 Sum_probs=38.9
Q ss_pred HHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 19 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 19 L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+.+..++.|++++.+++|+++..++ +.+.++... .+.+++++.+|+|+|.+..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~--~~v~v~~~~--------------~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN--QLIAWTRKE--------------EQQWYSYDKLILATGASQF 116 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT--TEEEEEETT--------------EEEEEECSEEEECCCCCBC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC--CEEEEEecC--------------ceEEEEcCEEEECCCcccC
Confidence 4566678999999999999997664 334443221 1468999999999999644
No 318
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=53.80 E-value=7.6 Score=34.22 Aligned_cols=37 Identities=14% Similarity=-0.098 Sum_probs=29.7
Q ss_pred CCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 216 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 216 ~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
+++.++|++... .+ .=|+-|+.||..||+.|.+.+..
T Consensus 118 grl~FAGe~ts~-~~---g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 118 GPVYFAGEHVSL-KH---AWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp TTEEECSGGGTT-ST---TSHHHHHHHHHHHHHHHHTCCC-
T ss_pred CcEEEEEHHHcC-Cc---cCHHHHHHHHHHHHHHHHHHhcc
Confidence 689999999884 33 33677999999999999987754
No 319
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=53.48 E-value=9.2 Score=37.86 Aligned_cols=39 Identities=18% Similarity=0.068 Sum_probs=32.0
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++++-++. +. =++.|+..|+.||+.|..
T Consensus 265 t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 265 TLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp CSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcC
Confidence 4569999999999988775 32 268999999999998863
No 320
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=53.29 E-value=8.5 Score=38.12 Aligned_cols=40 Identities=15% Similarity=0.033 Sum_probs=32.8
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++..+|.+++ =++.|+..|..||+.|..
T Consensus 263 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 263 TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 3568999999999998876553 468999999999998863
No 321
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=53.14 E-value=11 Score=37.82 Aligned_cols=40 Identities=18% Similarity=-0.001 Sum_probs=33.2
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++...++.++. =.+.|+..|+.||+.|..
T Consensus 270 t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 270 TSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp CSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 4568999999999988877664 468999999999998863
No 322
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=52.97 E-value=9.2 Score=38.38 Aligned_cols=40 Identities=20% Similarity=-0.027 Sum_probs=32.9
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
..-||+..+||.|+.-++.++. -.+.|+..|+.||+.|+.
T Consensus 266 Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 266 TNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp CSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 4569999999999998876543 368899999999998863
No 323
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=52.71 E-value=9.4 Score=39.37 Aligned_cols=40 Identities=23% Similarity=0.197 Sum_probs=33.6
Q ss_pred cccCCEEEEccCCCcccCccccc-----HHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKG-----THTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~G-----I~~Am~SG~lAAeai~~ 252 (442)
...||+.++||++.+-++.++.- .+.|+..|+.||+.|..
T Consensus 293 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 293 TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 35699999999998888766653 78999999999999874
No 324
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=52.63 E-value=13 Score=36.64 Aligned_cols=40 Identities=20% Similarity=0.044 Sum_probs=33.0
Q ss_pred cccCCEEEEccCCCcccCcc-c-----ccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPK-I-----KGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~-g-----~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++++.++++ + +-++.|+..|..||+.|..
T Consensus 275 t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 275 TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcC
Confidence 35699999999999988766 3 2378999999999998863
No 325
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=52.43 E-value=14 Score=36.62 Aligned_cols=43 Identities=9% Similarity=-0.009 Sum_probs=34.6
Q ss_pred ccCCEEEEccCCCcccC----c---ccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 214 VFPGGAIIGCAAGFLNV----P---KIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp----~---~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
..||+.++||+++..++ + ..+=.+.|+..|..||+.|...+.+
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999998752 1 1234688999999999999988864
No 326
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=52.36 E-value=13 Score=36.98 Aligned_cols=55 Identities=18% Similarity=0.195 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 13 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 13 ~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
.++...|.+.+++.|++++. .+|+++..++ . .|.+.+ +.++.+++||+|+|....
T Consensus 59 ~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~--~V~~~~---------------g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 59 DDIAFPIRHYVERKGIHFIA-QSAEQIDAEA--Q--NITLAD---------------GNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp HHHEEECHHHHHTTTCEEEC-SCEEEEETTT--T--EEEETT---------------SCEEECSEEEECCCCEEC
T ss_pred HHHHHHHHHHHHHCCCEEEE-eEEEEEEcCC--C--EEEECC---------------CCEEECCEEEECCCCCcC
Confidence 34444566777889999986 4888886554 2 355553 457999999999998654
No 327
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=51.67 E-value=7 Score=38.59 Aligned_cols=40 Identities=23% Similarity=0.063 Sum_probs=33.0
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++...+|.++. =++.|+..|..||+.|..
T Consensus 265 t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 265 TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 3569999999999998877643 378999999999998863
No 328
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=50.93 E-value=10 Score=37.47 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=37.3
Q ss_pred HHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 19 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 19 L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.+..++.|++++.+++|+++..++ . .|.+.+ |.++.++.+|+|+|.+
T Consensus 68 ~~~~~~~~~i~~~~~~~V~~id~~~-~---~v~~~~---------------g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 68 KNDWYEKNNIKVITSEFATSIDPNN-K---LVTLKS---------------GEKIKYEKLIIASGSI 115 (385)
T ss_dssp CHHHHHHTTCEEECSCCEEEEETTT-T---EEEETT---------------SCEEECSEEEECCCEE
T ss_pred CHHHHHHCCCEEEeCCEEEEEECCC-C---EEEECC---------------CCEEECCEEEEecCCC
Confidence 3455667899999999999997654 3 355553 4689999999999974
No 329
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=50.58 E-value=8.8 Score=36.65 Aligned_cols=35 Identities=17% Similarity=-0.073 Sum_probs=28.9
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
..+|+.+.||+-. +-||.-|+.||+.||+.|.+.|
T Consensus 308 ~~~~l~laGd~~~------g~~v~~ai~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 308 HKPFLACGGDGFT------QSNFDGCITSALCVLEALKNYI 342 (342)
T ss_dssp TTTEEEECSGGGS------CSSHHHHHHHHHHHHHHHTTC-
T ss_pred CCccEEEEccccC------CCCccHHHHHHHHHHHHHHhhC
Confidence 3589999999864 5599999999999999987643
No 330
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=50.57 E-value=16 Score=35.72 Aligned_cols=42 Identities=26% Similarity=0.255 Sum_probs=32.5
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
...||+..+||+|..... .+=-+.|+..|..||+.|...+.+
T Consensus 284 t~~p~VfAiGDva~~~~~--pk~a~~A~~qa~v~A~ni~~~l~G 325 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPM--PKSAYSANSQAKVAAAAVVALLKG 325 (401)
T ss_dssp SSSTTEEECGGGBCCTTS--CBSHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEecccccCCCC--CchHHHHHHHHHHHHHHHHHHhcC
Confidence 345999999999865431 233478999999999999988865
No 331
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=50.29 E-value=17 Score=36.52 Aligned_cols=35 Identities=26% Similarity=0.175 Sum_probs=28.0
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..|++.++||+++. . ..-.+.|+..|..||+.|..
T Consensus 305 ~~~~IyA~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 305 SIPDVYAIGDVVDK-G---PMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SSTTEEECGGGBSS-S---CSCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCC-C---CccHhHHHHHHHHHHHHHcC
Confidence 46899999999984 1 23467899999999998864
No 332
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=49.81 E-value=8.7 Score=38.50 Aligned_cols=38 Identities=16% Similarity=-0.032 Sum_probs=32.3
Q ss_pred ccCCEEEEccCCCcccCccc-----ccHHHHHHHHHHHHHHHH
Q 013495 214 VFPGGAIIGCAAGFLNVPKI-----KGTHTAMKSGMLAAEAGF 251 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g-----~GI~~Am~SG~lAAeai~ 251 (442)
..|++.++||+++..++.++ +-.+.|+..|+.||+.|.
T Consensus 273 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 273 SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 56899999999999887665 357899999999998875
No 333
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=49.54 E-value=19 Score=35.97 Aligned_cols=34 Identities=24% Similarity=0.081 Sum_probs=27.4
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..+++.++||+++.. .=.+.|+..|..||+.|..
T Consensus 293 ~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 293 RVPHIYAIGDVVRGP-----MLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCc-----cCHHHHHHhHHHHHHHHcC
Confidence 358999999999852 2357899999999999874
No 334
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=49.22 E-value=3.5 Score=41.91 Aligned_cols=27 Identities=7% Similarity=0.091 Sum_probs=22.2
Q ss_pred eEEEecCCCccC-----------------------CcccccCCCCCeeEE
Q 013495 403 KLQINAQNCLHC-----------------------KACDIKDPKQNIKWT 429 (442)
Q Consensus 403 ~~~i~~~~Ci~C-----------------------g~C~~~cp~~~I~w~ 429 (442)
.+.||.+.|..| +.|+..||++||+|.
T Consensus 243 ~i~id~~~v~~~~~~e~~~~~~a~~g~~~~~~di~~~vv~~CPt~ai~~~ 292 (437)
T 3or1_A 243 DIKIDQEAVKAYVGGEFKPNAGAHAGRDWGKFDIEAEVVGLCPTGCMTYE 292 (437)
T ss_dssp CCEECHHHHHHHHHTSSCGGGGTTTTSCCCSCCHHHHTTTTCTTCCEEEE
T ss_pred CCccCHHHHHHHhhcCCCCcccccccCcCcccccchhhhccCcHHheeec
Confidence 588898877544 479999999999996
No 335
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=48.34 E-value=13 Score=36.28 Aligned_cols=49 Identities=27% Similarity=0.190 Sum_probs=35.8
Q ss_pred HHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 19 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 19 L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+.+.+++.|++++.+++|..+..++ + .|.+.+ .++.++.+|+|+|.+..
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~----------------~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPGH--Q--RIWIGE----------------EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGGG--T--EEEETT----------------EEEECSEEEECCCEEEC
T ss_pred HHHHHHhCCcEEEeCCEEEEEECCC--C--EEEECC----------------cEEECCEEEEeCCCCcC
Confidence 3445578899999999999886543 2 244432 47999999999998643
No 336
>1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1
Probab=48.20 E-value=5.8 Score=40.80 Aligned_cols=27 Identities=22% Similarity=0.306 Sum_probs=22.3
Q ss_pred CCCcccCCCCCccccccccccceEEEe
Q 013495 369 KIPELVNLPEYAGPESRYCPARVYEYV 395 (442)
Q Consensus 369 ~~c~~~~~~~~~~~c~~~CPa~~y~~~ 395 (442)
+.|..|.--.+++.|+..||.+.|.+.
T Consensus 216 ~~C~aC~~~~~~g~Cv~~CP~~~y~~~ 242 (478)
T 1igr_A 216 TACVACRHYYYAGVCVPACPPNTYRFE 242 (478)
T ss_dssp TSEEEESSEECSSSEESSCCTTCEEET
T ss_pred cceeeeeeeccCCcCcccCCCceeEec
Confidence 348888766778999999999999874
No 337
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=47.98 E-value=16 Score=35.82 Aligned_cols=40 Identities=20% Similarity=0.054 Sum_probs=32.9
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
..||+.++||++++-.| +=.+.|+..|..||+.|...+..
T Consensus 298 ~~~~vfa~GD~~~~~~~---~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVP---KLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp SCTTEEECGGGBTTCCS---CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeehhccCCCC---cHHHHHHHHHHHHHHHHHHHhcC
Confidence 56999999999997333 34688999999999999988843
No 338
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=47.72 E-value=14 Score=36.54 Aligned_cols=37 Identities=8% Similarity=-0.152 Sum_probs=30.0
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
.+|+.++||+....-| + +|+-|+.||..||+.|.+.+
T Consensus 415 ~~~l~~aG~~~~~~~~--g-~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGY--Q-HVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp BTTEEECCGGGCSTTT--T-SHHHHHHHHHHHHHHHHHHC
T ss_pred cCceEEeecccccccc--c-chHHHHHHHHHHHHHHHHHh
Confidence 3799999998754332 3 79999999999999998765
No 339
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=47.28 E-value=13 Score=37.61 Aligned_cols=39 Identities=26% Similarity=0.034 Sum_probs=32.4
Q ss_pred ccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
..|++..+||++...++.+++ =.+.|+..|..||+.|..
T Consensus 309 s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 309 NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 468999999999988776553 378999999999998863
No 340
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=46.79 E-value=13 Score=35.11 Aligned_cols=40 Identities=10% Similarity=-0.020 Sum_probs=29.8
Q ss_pred cccCCEEEEc--cCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 213 PVFPGGAIIG--CAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 213 ~~~~g~llvG--DAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
...||+.++| |+++. ...-+..|+..|..||+.|.+.|++
T Consensus 312 t~~~~vya~Gd~d~~~~----~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 312 LAVPSVWLLGYGDWNGM----ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SSCTTEEECSSCGGGST----TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCCCeEEecccccccc----chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 3568999999 66652 1234556999999999999988764
No 341
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=46.58 E-value=14 Score=38.45 Aligned_cols=40 Identities=20% Similarity=0.076 Sum_probs=33.6
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++.+.++.++. -.+.|+..|+.||+.|..
T Consensus 308 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 308 TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 3568999999999988876654 568999999999999875
No 342
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=46.53 E-value=28 Score=35.25 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=28.4
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 307 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 307 TLATGIYAAGDCTGLL-----PLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp CSSTTEEECSGGGTSC-----SCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 3468999999999852 2357899999999999875
No 343
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=45.89 E-value=8.8 Score=39.20 Aligned_cols=38 Identities=29% Similarity=0.218 Sum_probs=30.7
Q ss_pred cCCEEEEccCCCcccCcccc----cHHHHHHHHHHHHHHHHh
Q 013495 215 FPGGAIIGCAAGFLNVPKIK----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~----GI~~Am~SG~lAAeai~~ 252 (442)
.|++.++||+|++.++.++. =...|+..|++||+.|..
T Consensus 310 ~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g 351 (493)
T 1m6i_A 310 RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTG 351 (493)
T ss_dssp ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTS
T ss_pred CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcC
Confidence 48999999999998876543 235899999999998863
No 344
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=45.55 E-value=18 Score=35.99 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=32.8
Q ss_pred cccCCEEEEccCCCcccCcc-------cccHHHHHHHHHHHHHHHHhhhcc
Q 013495 213 PVFPGGAIIGCAAGFLNVPK-------IKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~-------g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
...|++..+||+|.+-++-. -+=-+.|+..|..+|+.|...+++
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g 334 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 34589999999998754211 111268999999999999988765
No 345
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=45.42 E-value=17 Score=37.02 Aligned_cols=36 Identities=17% Similarity=0.112 Sum_probs=30.8
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
..+++.++||+++. ..+..|+..|..||+.|...+.
T Consensus 342 s~~~vya~GD~~~~------~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 342 IKDGIYVAGSAVSI------KPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp EETTEEECSTTTCC------CCHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEeccCCc------cCHHHHHHHHHHHHHHHHHHcC
Confidence 56899999999985 3578999999999999987663
No 346
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=44.59 E-value=24 Score=35.39 Aligned_cols=35 Identities=23% Similarity=0.224 Sum_probs=29.2
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++. ..-.+.|+..|..||+.|..
T Consensus 298 t~~~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 298 TNIPNVFATGDANGL-----APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp CSSTTEEECGGGTCS-----CCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEecCCC-----CccHhHHHHHHHHHHHHHhC
Confidence 356999999999987 23468899999999999874
No 347
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=44.40 E-value=10 Score=40.16 Aligned_cols=55 Identities=20% Similarity=0.320 Sum_probs=34.4
Q ss_pred CCCCcccCCCCCccccccccccceE------EEecCCCCceeEEEecCCCc-cC---------CcccccCCCCC
Q 013495 368 PKIPELVNLPEYAGPESRYCPARVY------EYVPDEKNQLKLQINAQNCL-HC---------KACDIKDPKQN 425 (442)
Q Consensus 368 ~~~c~~~~~~~~~~~c~~~CPa~~y------~~~~~~~~~~~~~i~~~~Ci-~C---------g~C~~~cp~~~ 425 (442)
...|..|.--.+++.|+..||.+-| ++....++ +..+ ..+|+ .| |.|+..||.+-
T Consensus 228 ~~~C~aC~~~~~~g~Cv~~CP~~~~y~~~t~~~~~n~~~--~y~~-~~~Cv~~Cp~~~~~~~~~~Cv~~CP~g~ 298 (608)
T 1n8y_C 228 HSDCLACLHFNHSGICELHCPALVTYNTDTFESMHNPEG--RYTF-GASCVTTCPYNYLSTEVGSCTLVCPPNN 298 (608)
T ss_dssp TTSBSSBSSEEETTEEESSCCCSEEC-----CCEECTTC--CEEE-TTEEESSCCTTCEECTTSBEESSCCTTE
T ss_pred CCccccCcccccCCchhccCCCcccccCcceeeecCCcc--cccc-chhhhhcCCcccEeccCCeEeccCCCCC
Confidence 3457777665678999999999963 22222122 3333 45676 45 67777887654
No 348
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=44.25 E-value=26 Score=35.34 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=28.0
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++. | .=.+.|+..|+.||+.|..
T Consensus 312 t~~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGK--V---ELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CSSTTEEECGGGTTS--S---CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEecCCC--c---ccHHHHHHHHHHHHHHhcC
Confidence 356899999999875 2 2367999999999998863
No 349
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=43.50 E-value=20 Score=37.09 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=29.6
Q ss_pred HCCcEEec--CCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 25 ELGVEIYP--GFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 25 ~~Gvei~~--g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
+.+|++.. +..|.++. ++ ||++.+ | ++.+|+||.|+|...
T Consensus 350 ~~nV~lv~~~~~~I~~it--~~----gv~~~d---------------G-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 350 RDNVHLVDIREAPIQEVT--PE----GIKTAD---------------A-AYDLDVIIYATGFDA 391 (545)
T ss_dssp STTEEEEETTTSCEEEEE--TT----EEEESS---------------C-EEECSEEEECCCCBS
T ss_pred CCCEEEEecCCCCceEEc--cC----eEEeCC---------------C-eeecCEEEECCcccc
Confidence 34788875 66777764 21 577764 6 899999999999874
No 350
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=42.98 E-value=17 Score=36.47 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHC--------CcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 14 QLVRWLGGKAEEL--------GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 14 ~fd~~L~~~Ae~~--------Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
.+-+.|++...+. |++|+.+++|++|..++++ | .|++.+ |.+++|+.||.|.+..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTED---------------NSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETT---------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECC---------------CCEEEcCEEEEecCHH
Confidence 4555565555443 7899999999999987644 4 377764 4689999999999864
No 351
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=42.19 E-value=19 Score=36.51 Aligned_cols=38 Identities=18% Similarity=-0.034 Sum_probs=30.8
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
...+|++++||++..- .=+..|+..|+.||+.|...|.
T Consensus 407 Ts~~~VfA~GD~~~g~-----~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRGA-----SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp CSSTTEEECGGGGSSC-----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccCCc-----hHHHHHHHHHHHHHHHHHHHhh
Confidence 3568999999998642 2378999999999999987664
No 352
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=41.88 E-value=46 Score=33.34 Aligned_cols=38 Identities=16% Similarity=-0.084 Sum_probs=31.2
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
.+++.++|++...- ..+|+-||.||+.||+.|.+.+..
T Consensus 449 ~~~l~fAGe~t~~~----~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 449 QGRIYFAGEYTAQA----HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp BTTEEECSGGGSSS----SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEcccccC----CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 47999999998531 247999999999999999987754
No 353
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=40.44 E-value=18 Score=33.85 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=25.4
Q ss_pred ccccccceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 013495 384 SRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 429 (442)
Q Consensus 384 ~~~CPa~~y~~~~~~~~~~~~~i~~~~Ci~Cg~C~~~cp~~~I~w~ 429 (442)
....|+.+..+... +.+.+| .+||.|...||.++|...
T Consensus 154 ak~~pv~t~~yr~~----p~I~i~----~~C~~C~~~CP~g~I~id 191 (265)
T 2pa8_D 154 AKFIPVSLSVVRYY----PKVEIL----ANCEKAVNVCPEGVFELK 191 (265)
T ss_dssp GGGCCEEEEEEEEE----EEEEEC----SCCTTHHHHCTTCCEEEE
T ss_pred cCcccceeeeeccc----cchhhh----hhHHHHHHhCcccCeEec
Confidence 34556554333221 246666 889999999999998764
No 354
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=40.27 E-value=21 Score=35.77 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=33.7
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
.-||+.++|..++.--++-|-.+..|+.+|++|++.+++..
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 46999999999994345666677899999999999987654
No 355
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=40.01 E-value=10 Score=39.77 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=24.6
Q ss_pred CeEecCCCCCcccCCCCCccccccccccceEEEecC
Q 013495 362 HLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPD 397 (442)
Q Consensus 362 Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~ 397 (442)
.++| |.+.|+.| +.|...||.++++|..-
T Consensus 545 ~~~i-~~~~Ci~C------~~C~~~cp~~~i~~~~p 573 (584)
T 2gmh_A 545 RLQI-NAQNCVHC------KTCDIKDPSQNINWVVP 573 (584)
T ss_dssp EEEE-CGGGCCCC------CHHHHHCTTCCEEECCC
T ss_pred EEEE-eCCCCcCC------CCchhhCCCCCceeECC
Confidence 4544 89999999 89999999999999753
No 356
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=39.82 E-value=55 Score=32.72 Aligned_cols=34 Identities=41% Similarity=0.462 Sum_probs=27.5
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..|++.++||+++.. .=.+.|+..|..||+.|..
T Consensus 300 ~~~~Iya~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 300 SVPGVYAIGDAARPP-----LLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp SSTTEEECGGGTCSS-----CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 458999999999852 2357899999999998864
No 357
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=39.22 E-value=28 Score=34.90 Aligned_cols=40 Identities=15% Similarity=-0.076 Sum_probs=32.5
Q ss_pred cccCCEEEEccCCCcccCcccc-----cHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~-----GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++.+-++.++. =.+.|+..|+.||+.|..
T Consensus 284 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 284 TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 3569999999999887776654 347899999999998863
No 358
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=39.15 E-value=4.8 Score=44.17 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=17.4
Q ss_pred EecCCCccCCcccccCCCCC
Q 013495 406 INAQNCLHCKACDIKDPKQN 425 (442)
Q Consensus 406 i~~~~Ci~Cg~C~~~cp~~~ 425 (442)
.+.+.|++||.|..+||...
T Consensus 412 ~~~~~Ci~CG~C~~~CP~~~ 431 (807)
T 3cf4_A 412 NMVAKCADCGACLLACPEEI 431 (807)
T ss_dssp HHHHHCCCCCHHHHHCTTCC
T ss_pred HhHHhCCCCCchhhhCCCCC
Confidence 35678999999999999875
No 359
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=38.67 E-value=15 Score=36.74 Aligned_cols=38 Identities=21% Similarity=0.023 Sum_probs=31.3
Q ss_pred ccCCEEEEccCCCcccCccc-----ccHHHHHHHHHHHHHHHH
Q 013495 214 VFPGGAIIGCAAGFLNVPKI-----KGTHTAMKSGMLAAEAGF 251 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g-----~GI~~Am~SG~lAAeai~ 251 (442)
..|++.++||+++..++.++ +-.+.|+..|+.||+.|.
T Consensus 272 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 272 SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 45899999999998776554 347899999999998875
No 360
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=38.57 E-value=12 Score=39.55 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=23.7
Q ss_pred eEecCCCCCcccCCCCCccccccccccceEEEec
Q 013495 363 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVP 396 (442)
Q Consensus 363 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~ 396 (442)
.-++.++.|++| |.|++-||-+++++..
T Consensus 47 ~~~i~~~~c~~~------~~~~~~cp~~~i~i~n 74 (608)
T 3j16_B 47 IAFISEILCIGC------GICVKKCPFDAIQIIN 74 (608)
T ss_dssp EEEECTTTCCCC------CHHHHHCSSCCEEEEE
T ss_pred ceEEehhhcccc------ccccccCCccceEEec
Confidence 444578999999 8999999999999853
No 361
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=38.32 E-value=35 Score=36.11 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=36.3
Q ss_pred HHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCC
Q 013495 17 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 86 (442)
Q Consensus 17 ~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s 86 (442)
.++.+..++.||+++++++|.++. +++ +.++ .+ |+ ..++.++.||.|.|...
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~--v~~~-~~------G~-------~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG--LHVV-IN------GE-------TQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE--EEEE-ET------TE-------EEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe--EEEe-cC------Ce-------EEEEeCCEEEECCCccc
Confidence 345666788999999999999885 223 2232 21 21 25799999999999753
No 362
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=38.02 E-value=8.4 Score=39.65 Aligned_cols=25 Identities=16% Similarity=0.176 Sum_probs=21.4
Q ss_pred CCcccCCCCCccccccccccceEEE
Q 013495 370 IPELVNLPEYAGPESRYCPARVYEY 394 (442)
Q Consensus 370 ~c~~~~~~~~~~~c~~~CPa~~y~~ 394 (442)
.|..|..-.+.+.|+..||.+-|..
T Consensus 224 ~ClsC~~~~~~g~Cv~~CP~g~y~~ 248 (486)
T 2hr7_A 224 KCVACRNFYLDGRCVETCPPPYYHF 248 (486)
T ss_dssp SBSSBSSEEETTEEESSCCTTCEEE
T ss_pred ccccCccccCCCccccccCCCeEec
Confidence 3888877678899999999999875
No 363
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=37.72 E-value=18 Score=35.53 Aligned_cols=30 Identities=17% Similarity=-0.039 Sum_probs=25.5
Q ss_pred CCEEEEccCCCcccCcccccH--HHHHHHHHHHHHHH
Q 013495 216 PGGAIIGCAAGFLNVPKIKGT--HTAMKSGMLAAEAG 250 (442)
Q Consensus 216 ~g~llvGDAAg~vdp~~g~GI--~~Am~SG~lAAeai 250 (442)
+|+.++||... | ..|+ .-|+.||+.||++|
T Consensus 372 ~gl~laGd~~~---~--~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYR---P--PGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCC---C--TTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCccc---C--CCceeeehHHHHHHHHHHHh
Confidence 99999999985 2 2355 88999999999998
No 364
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=36.49 E-value=3.7 Score=45.47 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=21.2
Q ss_pred CcccCCCCCccccccccccceEEE
Q 013495 371 PELVNLPEYAGPESRYCPARVYEY 394 (442)
Q Consensus 371 c~~~~~~~~~~~c~~~CPa~~y~~ 394 (442)
|..|.--.|.+.|+..||.+-|.+
T Consensus 225 C~~C~~~~~~~~Cv~~Cp~~~y~~ 248 (897)
T 2dtg_E 225 CVACRNFYLDGRCVETCPPPYYHF 248 (897)
T ss_dssp EECCSSCBBTTBCCSSCCSSCCCC
T ss_pred eeECccCccCCcchhhcCCceeEe
Confidence 888887788999999999998865
No 365
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=35.83 E-value=60 Score=30.05 Aligned_cols=57 Identities=18% Similarity=0.068 Sum_probs=39.6
Q ss_pred EehHHHHHHHHHHHHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 10 KSLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 10 v~R~~fd~~L~~~Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
+.-.++.....+...+.+..+..+..+....... . ..+... +.++++|.+|+|+|++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~----------------~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 59 ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE-Y--KVINFG----------------NKELTAKAVIIATGAE 115 (312)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS-C--EEEECS----------------SCEEEEEEEEECCCEE
T ss_pred cchHHHHHHHHHHHhhccccccceeeeeeeeeec-c--eeeccC----------------CeEEEeceeEEcccCc
Confidence 3445677777888888899888887766554432 2 222222 4689999999999975
No 366
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=35.12 E-value=24 Score=35.84 Aligned_cols=39 Identities=15% Similarity=-0.121 Sum_probs=31.2
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
.+++.++|++...--+-+ |+-|+.||..||+.|.+.+..
T Consensus 471 ~~rl~FAGe~ts~~~~g~---v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 471 DSRIRFAGEHTIMDGAGC---AYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp SSSEEECSTTSCSTTBTS---HHHHHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEeccccccCCCcc---chhHHHHHHHHHHHHHHHhhh
Confidence 478999999987654533 567999999999999887643
No 367
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=34.85 E-value=30 Score=34.75 Aligned_cols=50 Identities=8% Similarity=0.063 Sum_probs=34.3
Q ss_pred HHHCCcEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCC
Q 013495 23 AEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 85 (442)
Q Consensus 23 Ae~~Gvei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~ 85 (442)
++..+.+|+.+++|++|..++++ +.|.+.+ |+. ...+++||.||.|.+..
T Consensus 248 ~~~l~~~i~~~~~V~~I~~~~~~--v~v~~~~------~~~-----~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 248 YRDIQDKVHFNAQVIKIQQNDQK--VTVVYET------LSK-----ETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHTGGGEESSCEEEEEEECSSC--EEEEEEC------SSS-----CCCEEEESEEEECSCHH
T ss_pred HHhcccccccCCEEEEEEECCCe--EEEEEec------CCc-----ccceEEeCEEEECCChH
Confidence 33444589999999999987644 3566543 210 01368999999999864
No 368
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=32.95 E-value=33 Score=35.45 Aligned_cols=42 Identities=26% Similarity=0.287 Sum_probs=30.6
Q ss_pred HCCcEEec--CCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 25 ELGVEIYP--GFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 25 ~~Gvei~~--g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+.+|++.. +..+.++. ++ ||++.+ |.++.+|+||.|+|....
T Consensus 342 ~~nV~lv~~~~~~I~~it--~~----gv~~~d---------------G~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVT--AK----GVVTED---------------GVLHELDVLVFATGFDAV 385 (540)
T ss_dssp STTEEEEETTTSCEEEEC--SS----EEEETT---------------CCEEECSEEEECCCBSCS
T ss_pred CCCEEEEeCCCCCccEEe--cC----eEEcCC---------------CCEEECCEEEECCccCcc
Confidence 34788885 56777763 22 577764 568999999999998754
No 369
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=30.87 E-value=32 Score=35.60 Aligned_cols=41 Identities=12% Similarity=0.003 Sum_probs=32.6
Q ss_pred ccCCEEEEccCCCccc---CcccccHHHHHHHHHHHHHHHHhhh
Q 013495 214 VFPGGAIIGCAAGFLN---VPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 214 ~~~g~llvGDAAg~vd---p~~g~GI~~Am~SG~lAAeai~~al 254 (442)
.-||+..+|+++|-+. =+.|-.+..||..|++||+.+++..
T Consensus 520 ~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 520 PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 5689999999987553 3556667889999999999987643
No 370
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Probab=30.12 E-value=27 Score=37.01 Aligned_cols=23 Identities=9% Similarity=-0.019 Sum_probs=17.2
Q ss_pred CCCcccCCCCCccccccccccce
Q 013495 369 KIPELVNLPEYAGPESRYCPARV 391 (442)
Q Consensus 369 ~~c~~~~~~~~~~~c~~~CPa~~ 391 (442)
..|..|.--.+++.|+..||.+-
T Consensus 222 ~~C~aC~~~~~~g~Cv~~CP~~~ 244 (624)
T 1yy9_A 222 SDCLVCRKFRDEATCKDTCPPLM 244 (624)
T ss_dssp TCBSSBSSEESSSCEESSCCCSE
T ss_pred CcccccccCccCCcccccCCCcc
Confidence 45777765567788999999874
No 371
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=30.04 E-value=51 Score=35.38 Aligned_cols=24 Identities=25% Similarity=0.094 Sum_probs=20.2
Q ss_pred HHHHHHHHHCCcEEecCCeEeEEE
Q 013495 17 RWLGGKAEELGVEIYPGFAASEIL 40 (442)
Q Consensus 17 ~~L~~~Ae~~Gvei~~g~~v~~i~ 40 (442)
..+.+..++.||++++++++.++.
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~ 598 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIE 598 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEE
Confidence 456667788999999999999985
No 372
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=29.90 E-value=34 Score=34.94 Aligned_cols=38 Identities=16% Similarity=-0.175 Sum_probs=31.6
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
..|++..+||+|..-.|.++ ..|++.|..+|+.|....
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a---~~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTA---QVAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp TCSSEEECGGGEESSSCCCH---HHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcccCCCCCCch---HHHHHHHHHHHHHHHHHh
Confidence 46899999999998777665 579999999999987643
No 373
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=29.90 E-value=90 Score=31.28 Aligned_cols=35 Identities=26% Similarity=0.134 Sum_probs=28.5
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...||+.++||+++.. .-.+.|+..|+.||+.|+.
T Consensus 328 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 328 TSIAGVYAIGDVVRGP-----MLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCCc-----cchhHHHHHHHHHHHHHcC
Confidence 3558999999999642 4578999999999998864
No 374
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=29.66 E-value=34 Score=35.33 Aligned_cols=43 Identities=21% Similarity=0.079 Sum_probs=35.0
Q ss_pred ccccCCEEEEccCC--Cc--ccCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 212 YPVFPGGAIIGCAA--GF--LNVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 212 ~~~~~g~llvGDAA--g~--vdp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
+..-||+..+|++| |+ -|.+.+..+..|+..|++||+.+++.+
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 34579999999998 33 377878888899999999999987654
No 375
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=29.58 E-value=41 Score=33.89 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=28.6
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++. ..-.+.|+..|+.||+.|+.
T Consensus 316 t~~~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 316 TNVSHIWAVGDVTGH-----IQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp CSSTTEEECGGGGTS-----CCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEecCCC-----CcCHHHHHHHHHHHHHHHcC
Confidence 456999999999983 23457899999999999874
No 376
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=28.99 E-value=43 Score=33.45 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=28.2
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++. ..=.+.|+..|+.||+.|..
T Consensus 296 t~~~~iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 296 TSTPGIYALGDVTDR-----VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp CSSTTEEECSGGGSS-----CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEEecCCC-----CCChHHHHHHHHHHHHHHcC
Confidence 456999999999983 12357899999999999874
No 377
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=28.28 E-value=1.1e+02 Score=30.30 Aligned_cols=34 Identities=32% Similarity=0.218 Sum_probs=27.2
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..|++.++||+++.. .=.+.|+..|..||+.|..
T Consensus 296 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 296 SMHNVWAIGDVAGEP-----MLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp SSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 458999999999842 2357899999999998863
No 378
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=28.06 E-value=40 Score=37.58 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=30.6
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
..|++.++||+++.. ++..|+..|..||..|...+.
T Consensus 409 s~p~IyAaGD~a~~~------~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 409 AVANQHLAGAMTGRL------DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp CCTTEEECGGGGTCC------SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCch------hHHHHHHHHHHHHHHHHHHcC
Confidence 468999999999862 567999999999999987664
No 379
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=27.82 E-value=47 Score=33.63 Aligned_cols=35 Identities=20% Similarity=0.084 Sum_probs=28.9
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .-.+.|+..|+.||+.|..
T Consensus 303 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTL-----TLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp CSSTTEEECGGGGTSS-----CSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 3558999999999852 2358999999999999986
No 380
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=27.60 E-value=63 Score=32.80 Aligned_cols=62 Identities=15% Similarity=0.145 Sum_probs=33.0
Q ss_pred cEEecCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCcccHHH
Q 013495 28 VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 92 (442)
Q Consensus 28 vei~~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l 92 (442)
..+.++..+.++....+...+.|......+..+|- -+..|.++.+|+||.|+|.+...-..|
T Consensus 354 ~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v---~~~dg~~~~~D~VI~ATGy~~~~p~~L 415 (501)
T 4b63_A 354 HRILPERKITRVEHHGPQSRMRIHLKSSKPESEGA---ANDVKETLEVDALMVATGYNRNAHERL 415 (501)
T ss_dssp SEEECSEEEEEEECCSSSSCEEEEEEESCC-----------CCCEEEESEEEECCCEECCTHHHH
T ss_pred eeecCCcceeeeeecCCCCeEEEEeeeeEEeCCee---EeCCCeEEECCEEEECcCCCCCCcchh
Confidence 35667777777765443322333322211222221 122357899999999999987654443
No 381
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=27.57 E-value=31 Score=35.65 Aligned_cols=40 Identities=25% Similarity=0.160 Sum_probs=32.2
Q ss_pred ccCCEEEEccCCCcc---cCcccccHHHHHHHHHHHHHHHHhh
Q 013495 214 VFPGGAIIGCAAGFL---NVPKIKGTHTAMKSGMLAAEAGFGV 253 (442)
Q Consensus 214 ~~~g~llvGDAAg~v---dp~~g~GI~~Am~SG~lAAeai~~a 253 (442)
.-||+..+|+++|-+ |=+.|-.+..||.+|++||+.+++.
T Consensus 525 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 525 VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 469999999998755 3355667888999999999998754
No 382
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=26.03 E-value=52 Score=32.95 Aligned_cols=35 Identities=23% Similarity=0.114 Sum_probs=28.1
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...||+.++||+++.. .=.+.|+..|+.||+.|+.
T Consensus 321 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 321 TNVKGIYAVGDVCGKA-----LLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CSSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEecCCCC-----ccHhHHHHHHHHHHHHHcC
Confidence 4569999999999542 3368899999999998864
No 383
>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A
Probab=25.91 E-value=23 Score=36.95 Aligned_cols=26 Identities=15% Similarity=-0.125 Sum_probs=19.8
Q ss_pred CCCCcccCCCCCccccccccccceEE
Q 013495 368 PKIPELVNLPEYAGPESRYCPARVYE 393 (442)
Q Consensus 368 ~~~c~~~~~~~~~~~c~~~CPa~~y~ 393 (442)
.+.|..|.--.+++.|+..||.+.|.
T Consensus 223 ~~~C~~C~~~~~~~~Cv~~Cp~~~~~ 248 (551)
T 3i2t_A 223 QKDCIACKNFFDEGVCKEECPPMRKY 248 (551)
T ss_dssp STTEEEESSEEETTEEESSCCCSEEE
T ss_pred ccccccchhhccCCeeeccCCchhcc
Confidence 36677776666778899999998654
No 384
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=25.69 E-value=53 Score=33.22 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=28.8
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++. ..=.+.|+..|+.||+.|..
T Consensus 316 t~~~~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 316 TNVDNIYAIGDVTDR-----VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CSSTTEEECGGGGCS-----CCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeccCCC-----ccCHHHHHHHHHHHHHHhcC
Confidence 356899999999974 23568999999999999874
No 385
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=25.68 E-value=55 Score=32.65 Aligned_cols=35 Identities=20% Similarity=-0.013 Sum_probs=28.5
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++..+||+++.. .-.+.|+..|..||+.|..
T Consensus 299 t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 299 TSNPNIYAAGDCTDQP-----QFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CSSTTEEECSTTBSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 3568999999999852 2378999999999998864
No 386
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=25.42 E-value=1.3e+02 Score=30.62 Aligned_cols=35 Identities=23% Similarity=0.169 Sum_probs=27.8
Q ss_pred cccCCEEEEccCC-CcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAA-GFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAA-g~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...||+.++||++ +. ..-.+.|+..|+.||+.|+.
T Consensus 344 Ts~~~IyA~GD~~~g~-----~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 344 TNVPYIYAIGDILEDK-----VELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp CSSTTEEECGGGBSSS-----CCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEeccCCC-----CccHHHHHHHHHHHHHHHcC
Confidence 3558999999998 32 23468899999999999874
No 387
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=25.11 E-value=59 Score=32.47 Aligned_cols=35 Identities=29% Similarity=0.248 Sum_probs=28.3
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...||+.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 308 t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGA-----MLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 3568999999999642 2468999999999999874
No 388
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=24.94 E-value=32 Score=36.57 Aligned_cols=36 Identities=31% Similarity=0.042 Sum_probs=29.9
Q ss_pred cCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHhhhcc
Q 013495 215 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 256 (442)
Q Consensus 215 ~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~al~~ 256 (442)
.+++.++||+++. .-+..|+..|..||..|...+.+
T Consensus 641 ~~~VyaiGD~~~~------~~~~~A~~~g~~aa~~i~~~l~g 676 (690)
T 3k30_A 641 IASVRGIGDAWAP------GTIAAAVWSGRRAAEEFDAVLPS 676 (690)
T ss_dssp CSEEEECGGGTSC------BCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEeCCCch------hhHHHHHHHHHHHHHHHHhhccC
Confidence 4899999999973 34667999999999999887654
No 389
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=24.76 E-value=56 Score=32.50 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=28.2
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .-.+.|+..|+.||+.|..
T Consensus 293 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 293 TNIEGIYAVGDNTGAV-----ELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CSSTTEEECSGGGTSC-----CCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeccCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 3568999999998742 2468899999999998864
No 390
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=24.76 E-value=2e+02 Score=28.64 Aligned_cols=36 Identities=36% Similarity=0.265 Sum_probs=27.6
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...||+.++||++..- | .=++.|+..|+.||+.|..
T Consensus 316 t~~~~IyA~GD~~~~~-~---~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 316 TSVPHIYAIGDVAEGR-P---ELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp CSSTTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEeEEecCCC-C---cchhHHHHHHHHHHHHHcC
Confidence 3568999999998421 1 2367899999999998874
No 391
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=24.09 E-value=45 Score=35.50 Aligned_cols=44 Identities=20% Similarity=0.007 Sum_probs=34.8
Q ss_pred ccccCCEEEEccCCC-cc---cCcccccHHHHHHHHHHHHHHHHhhhc
Q 013495 212 YPVFPGGAIIGCAAG-FL---NVPKIKGTHTAMKSGMLAAEAGFGVLH 255 (442)
Q Consensus 212 ~~~~~g~llvGDAAg-~v---dp~~g~GI~~Am~SG~lAAeai~~al~ 255 (442)
+..-||+..+|++|+ -+ |.+.+..+..|+..|++||+.+++.+.
T Consensus 382 ~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 382 EAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp BCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 346799999999863 23 567777788899999999999877653
No 392
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=23.97 E-value=59 Score=32.91 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=28.4
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 320 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 320 TNVPNIYAIGDITDRL-----MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CSSTTEEECGGGGCSC-----CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeccCCCc-----cCHHHHHHHHHHHHHHhcC
Confidence 3568999999999742 3468899999999999874
No 393
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=23.24 E-value=43 Score=34.76 Aligned_cols=41 Identities=12% Similarity=0.033 Sum_probs=32.5
Q ss_pred ccCCEEEEccCCCccc---CcccccHHHHHHHHHHHHHHHHhhh
Q 013495 214 VFPGGAIIGCAAGFLN---VPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 214 ~~~g~llvGDAAg~vd---p~~g~GI~~Am~SG~lAAeai~~al 254 (442)
.-||+..+|+++|-+. =+.|-.+..||..|++||+.+++..
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 4689999999987553 2556678889999999999987643
No 394
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=22.77 E-value=55 Score=34.30 Aligned_cols=43 Identities=19% Similarity=0.029 Sum_probs=33.8
Q ss_pred ccccCCEEEEccCCC-cc---cCcccccHHHHHHHHHHHHHHHHhhh
Q 013495 212 YPVFPGGAIIGCAAG-FL---NVPKIKGTHTAMKSGMLAAEAGFGVL 254 (442)
Q Consensus 212 ~~~~~g~llvGDAAg-~v---dp~~g~GI~~Am~SG~lAAeai~~al 254 (442)
+..-||+..+|++|+ .+ |-+.+..+..|+..|++||+.+++.+
T Consensus 369 ~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 369 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 446799999999983 33 44556667889999999999988765
No 395
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=22.56 E-value=74 Score=31.86 Aligned_cols=36 Identities=19% Similarity=0.042 Sum_probs=27.5
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||++.. .| .-++.|+..|+.||+.|+.
T Consensus 316 t~~~~IyA~GD~~~~-~~---~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 316 TNVANIYAVGDIIYG-KP---ELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CSSTTEEECSTTBTT-SC---CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEcccCC-CC---ccHHHHHHHHHHHHHHHcC
Confidence 456999999999831 12 3468899999999998863
No 396
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=22.54 E-value=66 Score=34.93 Aligned_cols=36 Identities=17% Similarity=-0.081 Sum_probs=29.5
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..+++.++|++.....|- -|+-|+.||..||+.|++
T Consensus 740 ~~grL~FAGE~Ts~~~~g---tveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 740 IQGTVFFAGEATNRHFPQ---TVTGAYLSGVREASKIAA 775 (776)
T ss_dssp BTTTEEECSGGGCSSSCS---SHHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEehhhcCCCCc---CHHHHHHHHHHHHHHHHh
Confidence 357899999998865543 488899999999999875
No 397
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=22.39 E-value=67 Score=32.11 Aligned_cols=34 Identities=29% Similarity=0.257 Sum_probs=27.5
Q ss_pred ccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 214 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 214 ~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
..|++.++||+++. | .=.+.|+..|+.||+.|..
T Consensus 293 ~~~~Iya~GD~~~~--~---~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 293 NVPGVYALGDITGR--D---QLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp SSTTEEECGGGGTS--C---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeecCCC--c---ccHHHHHHHHHHHHHHHcC
Confidence 46899999999874 2 2367899999999998863
No 398
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=22.18 E-value=22 Score=36.02 Aligned_cols=41 Identities=12% Similarity=-0.116 Sum_probs=32.6
Q ss_pred ccccCCEEEEccCCC-cc---cCcccccHHHHHHHHHHHHHHHHh
Q 013495 212 YPVFPGGAIIGCAAG-FL---NVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 212 ~~~~~g~llvGDAAg-~v---dp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
+..-||+..+||+|+ -+ |++.+..+..|+..|+.||+.+..
T Consensus 326 ~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 326 ESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred ccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 446799999999998 44 467777788888889999888754
No 399
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=21.79 E-value=63 Score=32.94 Aligned_cols=35 Identities=29% Similarity=0.224 Sum_probs=28.2
Q ss_pred cccCCEEEEccCCCcccCcccccHHHHHHHHHHHHHHHHh
Q 013495 213 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 252 (442)
Q Consensus 213 ~~~~g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~~ 252 (442)
...|++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 343 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 343 TSVPNVYAVGDLIGGP-----MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp CSSTTEEECGGGGCSS-----CSHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeecCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 3568999999999853 2357899999999998863
No 400
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=21.21 E-value=83 Score=32.45 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=27.0
Q ss_pred CcEEe--cCCeEeEEEEcCCCcEEEEEeCCccccCCCCCccCCCCceEEEEcEEEeccCCCCc
Q 013495 27 GVEIY--PGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 87 (442)
Q Consensus 27 Gvei~--~g~~v~~i~~~~~g~v~gV~t~~~g~~~~G~~~~~~~~g~~i~Ak~vI~AdG~~s~ 87 (442)
+|++. ....+.++.. + ||++.+ | ++.+|+||.|+|....
T Consensus 357 ~V~lvd~~~~~I~~it~--~----gv~~~d---------------G-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 357 NVELVDLRSTPIVGMDE--T----GIVTTG---------------A-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp TEEEEETTTSCEEEEET--T----EEEESS---------------C-EEECSEEEECCCEEES
T ss_pred CEEEEeCCCCCceEEeC--C----cEEeCC---------------C-ceecCEEEECCccccc
Confidence 67776 2356666642 1 477764 6 8999999999998643
No 401
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=20.93 E-value=1e+02 Score=30.95 Aligned_cols=33 Identities=9% Similarity=0.002 Sum_probs=27.6
Q ss_pred CEEEEccCCCcccCcccccHHHHHHHHHHHHHHHH
Q 013495 217 GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 251 (442)
Q Consensus 217 g~llvGDAAg~vdp~~g~GI~~Am~SG~lAAeai~ 251 (442)
|+.++|.-+.+-.. ..+++.||.||+.||+.|.
T Consensus 420 ~l~~~Gr~g~~~y~--v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 420 CIYSRGRFGAWRYE--VGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TEEECSTTTTCCGG--GCSHHHHHHHHHHHHHHHT
T ss_pred CcEeecCCcccccC--CCChHHHHHHHHHHHHHHH
Confidence 99999998887542 1478999999999999986
No 402
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*
Probab=20.80 E-value=36 Score=35.95 Aligned_cols=24 Identities=13% Similarity=-0.034 Sum_probs=15.9
Q ss_pred CCCCcccCCCCCccccccccccce
Q 013495 368 PKIPELVNLPEYAGPESRYCPARV 391 (442)
Q Consensus 368 ~~~c~~~~~~~~~~~c~~~CPa~~ 391 (442)
++.|..|..-.+.+.|+..||.+.
T Consensus 219 ~~~C~~C~~~~~~~~Cv~~Cp~~~ 242 (617)
T 2ahx_A 219 DTDCFACMNFNDSGACVTQCPQTF 242 (617)
T ss_dssp TTSEEEESSEEETTEEESSCSCSE
T ss_pred CCccccccccccCCceeccCCCcc
Confidence 345666655556677888888774
Done!