BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013497
(442 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224080794|ref|XP_002306233.1| predicted protein [Populus trichocarpa]
gi|222849197|gb|EEE86744.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/430 (71%), Positives = 358/430 (83%), Gaps = 2/430 (0%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
KK K+N PE+ F NL +KSKDL +AISLY++A SQN RL+ H+FN LLYLCS S
Sbjct: 8 KKPKSNQTPESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLN 67
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
DPS+KD +L++GFRVFD M+SN + PNEAS+T+VARLAA+K DGDYAF L+K + +N
Sbjct: 68 DPSTKDLSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIG-VYNE 126
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+PRLRTYDPALFC+CE LE +KAYEVEEHM +G+ LE+ EIAALLKVS ET R E+VY+
Sbjct: 127 LPRLRTYDPALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETRREERVYE 186
Query: 194 YLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 253
YLQKLR VRCV EET K+IE WF + NGV D+GLV+ AV +NGGGWHGLGWIG+ K
Sbjct: 187 YLQKLRKMVRCVREETAKVIEHWFEVFEGNGVELDVGLVREAVSRNGGGWHGLGWIGKEK 246
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEK 313
WVV+RGSV+ GKCC CG+QL VDIDD ETERFA+SVA LAMEREVKANFSEFQ+WLEK
Sbjct: 247 WVVRRGSVNAGGKCCCCGEQLVSVDIDDDETERFAESVAGLAMEREVKANFSEFQNWLEK 306
Query: 314 NANYEAIVDGANIGLYQQNFTEGGFSVP-QLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
+ANYEAI+DGANIGLYQQNF EGGFS+ QLDAV+K LY +SG K PLVILHNKRLR+L
Sbjct: 307 HANYEAIMDGANIGLYQQNFAEGGFSISQQLDAVIKDLYNQSGKKGPLVILHNKRLRALL 366
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+NPS R L++EW EK VLY TPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGS+F
Sbjct: 367 QNPSTRELIQEWIEKDVLYTTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSDF 426
Query: 433 FLKWKERHQT 442
F+KWKERHQ
Sbjct: 427 FVKWKERHQV 436
>gi|255576329|ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
gi|223531469|gb|EEF33301.1| multidrug resistance pump, putative [Ricinus communis]
Length = 561
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/441 (68%), Positives = 360/441 (81%), Gaps = 2/441 (0%)
Query: 2 SNTTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHF 61
+ TT+T P K K N PE+ F NL +KSKDL +AISLY++A S +L+ HH+
Sbjct: 3 TGTTTTAPVGKKKPNKKNQTPESQFNYNLNFYSKSKDLNSAISLYKTAISNKTQLNQHHY 62
Query: 62 NALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
N LLYLCS S DPS K+ AL++GF +F+ M++ + NEAS+T++ARLAA+K DGDYAF
Sbjct: 63 NTLLYLCSISLNDPSEKELALQNGFDIFEHMVATGIKRNEASITAIARLAAAKGDGDYAF 122
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
LIK M + N +PRLRTYDP LFCFCE LEA KAYEVE+H+ MG++LE+ EIAALLKV
Sbjct: 123 NLIKNMLVD-NQLPRLRTYDPVLFCFCEKLEAFKAYEVEDHIVSMGMNLEELEIAALLKV 181
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGG 241
S ET E+VY YLQKLR TVRCV EET KI+EDWF +VNG D+GLV+ AV+KNGG
Sbjct: 182 SVETKNKERVYGYLQKLRKTVRCVKEETAKIVEDWFKDFEVNGKELDVGLVRKAVVKNGG 241
Query: 242 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK 301
GWHGLGWI +GKW VKRG++D G+CC CG+ LACVDIDD ETERFA S+A LAMEREVK
Sbjct: 242 GWHGLGWIEKGKWGVKRGNMDMDGRCCCCGESLACVDIDDLETERFAGSLAGLAMEREVK 301
Query: 302 ANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLV 361
ANFSEFQDWL+KNA+Y+AIVDGAN+GLYQQNF EGGFS+ QLDAVVK+LY+RSG KWPL+
Sbjct: 302 ANFSEFQDWLDKNADYDAIVDGANVGLYQQNFAEGGFSISQLDAVVKELYDRSG-KWPLI 360
Query: 362 ILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMR 421
+LHNKR+R++ ENPS RNL++EW EK +LY TPHGSNDDWYWLYAAVKL+CLLVTNDEMR
Sbjct: 361 VLHNKRVRAILENPSQRNLIQEWTEKDILYTTPHGSNDDWYWLYAAVKLKCLLVTNDEMR 420
Query: 422 DHIFELLGSNFFLKWKERHQT 442
DHIFELLGS+FFLKWKERHQ
Sbjct: 421 DHIFELLGSSFFLKWKERHQV 441
>gi|224103055|ref|XP_002312906.1| predicted protein [Populus trichocarpa]
gi|222849314|gb|EEE86861.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 301/425 (70%), Positives = 351/425 (82%), Gaps = 2/425 (0%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
N PE+ F NL +KSKDL +AISLY++A SQ+ RL+ H FN LLYLCS S DPS++
Sbjct: 10 NQTPESQFNYNLNFYSKSKDLHSAISLYDTAISQDTRLNQHGFNTLLYLCSVSLNDPSTE 69
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
+ ALR GFR+FD M+SN + PNEAS+T+VARLAA+K DGDYAF L+K + +N +PRLR
Sbjct: 70 ELALRCGFRIFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNVG-AYNELPRLR 128
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TYDPALFCFCE LEA KAYEVEEHMG MG+ LE+ EIAALLKVS E+ ++VY YLQKL
Sbjct: 129 TYDPALFCFCEKLEAHKAYEVEEHMGSMGVGLEEGEIAALLKVSVESRNEKRVYGYLQKL 188
Query: 199 RSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKR 258
R VRCV ET K+IE WF+ + +GV D+ LV+ AV +NGGGWHGLGWIG+GKWV+KR
Sbjct: 189 RKMVRCVRGETAKVIEHWFAVFEGSGVELDVDLVREAVSRNGGGWHGLGWIGKGKWVLKR 248
Query: 259 GSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYE 318
GSVD GKCC CG+QL VDIDD ETERFA+SVA LAM+REVKANFSEFQ+WLE++ANYE
Sbjct: 249 GSVDVGGKCCCCGEQLVSVDIDDDETERFAESVAGLAMQREVKANFSEFQNWLEEHANYE 308
Query: 319 AIVDGANIGLYQQNFTEGGFSVP-QLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSH 377
AIVDGANIGLYQQNF EGGFS+ QLDAVVK LY +SG KWPL+I+HNKRLR+L +NPS
Sbjct: 309 AIVDGANIGLYQQNFAEGGFSISQQLDAVVKDLYNQSGKKWPLIIMHNKRLRALLQNPST 368
Query: 378 RNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWK 437
R L++EW EK VLY TP GSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGS+FF+KWK
Sbjct: 369 RELIQEWIEKDVLYTTPQGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSDFFIKWK 428
Query: 438 ERHQT 442
ERHQ
Sbjct: 429 ERHQV 433
>gi|224132016|ref|XP_002328164.1| predicted protein [Populus trichocarpa]
gi|222837679|gb|EEE76044.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 307/430 (71%), Positives = 355/430 (82%), Gaps = 2/430 (0%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
KK K+N PE+ F NL +KSKDL +AISLY++A SQN RL+ H+FN LLYLCS S
Sbjct: 8 KKPKSNQTPESQFSYNLNFYSKSKDLHSAISLYDTAISQNTRLNQHNFNTLLYLCSISLN 67
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
DPS+KD +L++GFRVFD M+SN + PNEAS+T+VARLAA+K DGDYAF L+K + +N
Sbjct: 68 DPSTKDLSLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIG-VYNE 126
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+PRLRTYDPALFC+CE LE +KAYEVEEHM +G+ LE+ EIAALLKVS ET R E+VY
Sbjct: 127 LPRLRTYDPALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETRREERVYG 186
Query: 194 YLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 253
YLQKLR VRCV EET K+IE WF + NGV D+GLV+ AV +NGGGWHGLGWIG+ K
Sbjct: 187 YLQKLRKMVRCVREETAKVIEHWFEVFEGNGVELDVGLVREAVSRNGGGWHGLGWIGKEK 246
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEK 313
WVV+RGSVD GKCC CG QL VDIDD ETERFA+SVA LAMEREVKANFSEFQ+WLEK
Sbjct: 247 WVVRRGSVDAGGKCCCCGGQLVSVDIDDDETERFAESVAGLAMEREVKANFSEFQNWLEK 306
Query: 314 NANYEAIVDGANIGLYQQNFTEGGFSVP-QLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
+ANYEAI+DGANIGLYQQNF EGGFS+ QLDAV+K LY +SG K PL+ILHNKRLR+L
Sbjct: 307 HANYEAIMDGANIGLYQQNFAEGGFSISQQLDAVIKDLYNQSGKKRPLIILHNKRLRALL 366
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+NPS R L++EW EK VLY TPHGSNDDWYWLYAAVKLRC LVTNDEMRDHIFELLGS+F
Sbjct: 367 QNPSTRELIQEWIEKDVLYTTPHGSNDDWYWLYAAVKLRCWLVTNDEMRDHIFELLGSDF 426
Query: 433 FLKWKERHQT 442
F+KWKERHQ
Sbjct: 427 FVKWKERHQV 436
>gi|356543574|ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 530
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/426 (69%), Positives = 339/426 (79%), Gaps = 4/426 (0%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDS 80
NPE F L +C+K+KDL AISLY+ A S N RL+ HHFNALLYLCS+S DPS K +
Sbjct: 15 NPEAKFQFELNTCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNSVADPSLKPT 74
Query: 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN-VVPRLRT 139
AL +GFR F M + V+PNEA+VT+VARLAA+K D DYAF L+K M +N +PRLRT
Sbjct: 75 ALDYGFRAFCHMSALAVLPNEATVTAVARLAAAKGDADYAFDLVKSMGKNYNNALPRLRT 134
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
YDPALFCFCE L+A+KAYEVEEHM +G+SLE+ E+AALLKVSA GR +KVY+YL KLR
Sbjct: 135 YDPALFCFCEMLDADKAYEVEEHMSGVGVSLEEAEVAALLKVSARCGRADKVYEYLHKLR 194
Query: 200 STVRCVNEETGKIIEDWFSGQK---VNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVV 256
S+VRCV+E + +IE+WF G K V V + G VK VL+NGGGWHG GW+G+G WVV
Sbjct: 195 SSVRCVSESSAVVIEEWFRGSKSSEVGEVEFEAGQVKEGVLRNGGGWHGQGWVGKGDWVV 254
Query: 257 KRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNAN 316
R SV G CC CG+QL CVDIDDAE E+FA SVAALA EREVKANFSEFQ WLEK+A+
Sbjct: 255 SRTSVGADGHCCCCGEQLVCVDIDDAEREKFAGSVAALAFEREVKANFSEFQAWLEKHAS 314
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
YEAIVDGANIGLYQQNF +GGFS+ QLD VVK+LY RSG KWPLV+LHNKRLR L ENPS
Sbjct: 315 YEAIVDGANIGLYQQNFADGGFSISQLDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPS 374
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKW 436
R LVEEW G LY TP+GSNDDWYWL+AAVKLRCLLVTNDEMRDHIFEL+GSNFF +W
Sbjct: 375 SRRLVEEWMNNGALYTTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHIFELIGSNFFNQW 434
Query: 437 KERHQT 442
KERHQ
Sbjct: 435 KERHQV 440
>gi|356547141|ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 550
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 301/435 (69%), Positives = 347/435 (79%), Gaps = 4/435 (0%)
Query: 12 PNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDS 71
P KK+K NPET F L SC+K+KDL AISLY+ A S N RL+ HHFNALLYLCS+S
Sbjct: 5 PKKKKKGCRNPETKFQFELNSCSKAKDLRGAISLYDDAVSNNTRLNQHHFNALLYLCSNS 64
Query: 72 ATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF 131
DPS K +AL +GFR F M + V+PNEA+VT+VARLAA+K D DYAF L+K M +
Sbjct: 65 VADPSLKPTALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNY 124
Query: 132 N-VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
N +PRLRTYDPALFCFCE L+A+KAYEVEEHM +G+SLE+ E+AALLKVSA GRV+K
Sbjct: 125 NNALPRLRTYDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDK 184
Query: 191 VYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS---CDLGLVKNAVLKNGGGWHGLG 247
VY+YL +LRS+VRCV+E T +IE+WF G K + V D G VK VL+NGGGWHG G
Sbjct: 185 VYEYLHRLRSSVRCVSESTAVVIEEWFRGSKASEVGEAEFDAGRVKEGVLRNGGGWHGQG 244
Query: 248 WIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEF 307
W+G+G WVV R SV G CC CG QL CVDIDD ETE+FA SVAALA EREVKANFSEF
Sbjct: 245 WVGKGDWVVSRTSVVADGHCCCCGQQLVCVDIDDVETEKFAGSVAALAFEREVKANFSEF 304
Query: 308 QDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKR 367
Q WLEK+A+YEAIVDGANIGLYQQNF +GGF++ QLD VVK+LY RSG KWPLV+LHNKR
Sbjct: 305 QAWLEKHASYEAIVDGANIGLYQQNFADGGFNISQLDDVVKELYNRSGKKWPLVVLHNKR 364
Query: 368 LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
LR L ENPS R LVEEW + GVLY TP+GSNDDWYWL+AAVKLRCLLVTNDEMRDHIFEL
Sbjct: 365 LRGLMENPSSRRLVEEWMKNGVLYTTPNGSNDDWYWLFAAVKLRCLLVTNDEMRDHIFEL 424
Query: 428 LGSNFFLKWKERHQT 442
+GSNFF +WKERHQ
Sbjct: 425 IGSNFFNQWKERHQV 439
>gi|297799862|ref|XP_002867815.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313651|gb|EFH44074.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/450 (62%), Positives = 353/450 (78%), Gaps = 15/450 (3%)
Query: 8 NPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLY 66
+PSKPNKK+K + NPE + LINL SC+K KDL+ A++LY++A S ++RL+ HF +LLY
Sbjct: 15 SPSKPNKKQKGSRNPEKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLY 74
Query: 67 LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKR 126
LCS +DPS + A+ GF++FD+M+S+ + PNE+SVT+VARLAA+K DGDYAF L+K
Sbjct: 75 LCSAFISDPSLQTLAIDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKD 134
Query: 127 MNNEFNV-VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
+ V VPRLRTY PAL CFCE+LEAEK YEVEEHM G+ LE+ EI+ALLKVSA T
Sbjct: 135 IVVVGGVSVPRLRTYAPALLCFCESLEAEKGYEVEEHMDASGIMLEEAEISALLKVSAAT 194
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS-----CDLGLVKNAVLKNG 240
GR KVY+YL KLR + CV+EET K IE+WF G K + +S CD+ L++ AV KNG
Sbjct: 195 GRENKVYRYLHKLRECIGCVSEETSKTIEEWFYGVKASEISDKTIGCDIELLRAAVSKNG 254
Query: 241 GGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREV 300
GGWHGLGW+G+GKW+VK+G+V +GKC SCG+ LACVD ++ ETE F S+ ALAMER+
Sbjct: 255 GGWHGLGWVGEGKWIVKKGNVSPAGKCLSCGEHLACVDTNEVETENFVNSLVALAMERKA 314
Query: 301 K-------ANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER 353
K A+FSEFQ+WLEK+ +YEAI+DGANIGLYQQNF +GGFS+PQL+AVVK+LY +
Sbjct: 315 KMNSCEPMADFSEFQEWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQLEAVVKELYNK 374
Query: 354 SGNK-WPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRC 412
SGNK PLV+LH KR+ +L NP+HRNLVEEW + VLY TP GSNDDWYWLYAA KL+C
Sbjct: 375 SGNKKQPLVLLHKKRVNALLGNPNHRNLVEEWIDNNVLYATPPGSNDDWYWLYAAAKLKC 434
Query: 413 LLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
LLVTNDEMRDHIFELL ++FF KWKERHQ
Sbjct: 435 LLVTNDEMRDHIFELLSNSFFEKWKERHQV 464
>gi|359486225|ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 551
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/423 (65%), Positives = 339/423 (80%), Gaps = 4/423 (0%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
E F +L +C+K +DL+ A++L+ESA SQN RL +HFNALLYLC+ S +PSSK AL
Sbjct: 12 EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSKALAL 71
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
+GFR+FD M+++ V PNEA++T+VARLAA+K+DGD AF +++ M ++ + PRLRTY P
Sbjct: 72 DYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMG-KYELSPRLRTYGP 130
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202
AL+ FC NLE EKA+ VEEHM MG+ E+ E+AALLKVSAE GR +KVY YL KLR+ V
Sbjct: 131 ALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTAV 190
Query: 203 RCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRG 259
R V+E T +IIE WF G+ +V GV C LG ++ LKNGGGWHG GWIG+GKW+V R
Sbjct: 191 RSVSESTAEIIEGWFCGEAASEVGGVDCCLGAIEEVALKNGGGWHGQGWIGKGKWLVCRA 250
Query: 260 SVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEA 319
VD SG+C SC +QLA VDID AETE F +SVAA+AMEREV++NF EFQDWL+K+A+YEA
Sbjct: 251 KVDSSGQCGSCREQLATVDIDRAETETFLESVAAMAMEREVRSNFREFQDWLDKHADYEA 310
Query: 320 IVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRN 379
IVDGANIGLYQQNF G FS+PQLDAVVK+LY+RS K PLVILHNKR R L EN S+R
Sbjct: 311 IVDGANIGLYQQNFANGEFSIPQLDAVVKELYDRSQKKRPLVILHNKRFRKLSENASNRK 370
Query: 380 LVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKER 439
L++EW +GVLY TP+GSNDDWYWLYAAVKL+CLLVTNDEMRDHIFELLGS+FFLKWKER
Sbjct: 371 LLQEWLTQGVLYTTPNGSNDDWYWLYAAVKLKCLLVTNDEMRDHIFELLGSSFFLKWKER 430
Query: 440 HQT 442
HQ
Sbjct: 431 HQV 433
>gi|79557286|ref|NP_179256.3| proteinaceous RNase P 2 [Arabidopsis thaliana]
gi|75116712|sp|Q680B9.1|PRRP2_ARATH RecName: Full=Proteinaceous RNase P 2
gi|51970038|dbj|BAD43711.1| unnamed protein product [Arabidopsis thaliana]
gi|330251428|gb|AEC06522.1| proteinaceous RNase P 2 [Arabidopsis thaliana]
Length = 528
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/448 (63%), Positives = 349/448 (77%), Gaps = 15/448 (3%)
Query: 10 SKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLC 68
S+PNKK+K + NPETN L NL SC+KSKDL+ A++LY++A S +RLS HF LLYLC
Sbjct: 17 SRPNKKKKVSRNPETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLYLC 76
Query: 69 SDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
S S TD S + A+ GF +FD+M+S+ + PNEASVTSVARLAA+K +GDYAF ++K
Sbjct: 77 SASITDISLQYLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFV 136
Query: 129 NEFNV-VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187
+ V +PRLRTY PAL CFCE LEAEK YEVEEHM G++LE+ EI+ALLKVSA TGR
Sbjct: 137 SVGGVSIPRLRTYAPALLCFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGR 196
Query: 188 VEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGG 242
KVY+YL KLR V CV+EET KIIE+WF G+K NG+ D+G+++ AVL NGGG
Sbjct: 197 ENKVYRYLHKLREYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGG 256
Query: 243 WHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKA 302
WHG GW+G+GKW VK+G+V +G+C SC +QLACVD ++ ET++F S+ ALAM+R+ K
Sbjct: 257 WHGHGWVGEGKWTVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKM 316
Query: 303 N-------FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSG 355
N FSEFQDWLEK+ +YEAIVDGANIGLYQQNF +G FS+ QL++V+K+LY SG
Sbjct: 317 NSCETNVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQLESVMKELYRESG 376
Query: 356 N-KWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLL 414
N KWPL++LH +R+++L ENP+HRNLVEEW GVLY TP GSNDDWYWLYAA KL+CLL
Sbjct: 377 NNKWPLILLHKRRVKTLLENPTHRNLVEEWISNGVLYATPPGSNDDWYWLYAAAKLKCLL 436
Query: 415 VTNDEMRDHIFELLGSNFFLKWKERHQT 442
VTNDEMRDHIFELLGS FF KWKERHQ
Sbjct: 437 VTNDEMRDHIFELLGSTFFQKWKERHQV 464
>gi|186512202|ref|NP_193921.2| proteinaceous RNase P 3 [Arabidopsis thaliana]
gi|426020118|sp|F4JKB6.1|PRRP3_ARATH RecName: Full=Proteinaceous RNase P 3
gi|332659121|gb|AEE84521.1| proteinaceous RNase P 3 [Arabidopsis thaliana]
Length = 576
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/435 (62%), Positives = 338/435 (77%), Gaps = 15/435 (3%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLCSDSATDPSSKDSA 81
E + LINL SC+K KDL+ A++LY++A S ++RL+ HF +LLYLCS +DPS + A
Sbjct: 89 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 148
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+SVT+VARLAA+K DGDYAF L+K + V VPRLRTY
Sbjct: 149 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 208
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
PAL CFC+ LEAEK YEVE+HM G+ LE+ EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 209 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 268
Query: 201 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 255
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 269 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 328
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK-------ANFSEFQ 308
VK+G+V +GKC SC + LACVD ++ ETE F S+ LAMER+ K A+FSEFQ
Sbjct: 329 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 388
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKR 367
+WLEK+ +YEAI+DGANIGLYQQNF +GGFS+PQL+AVVK+LY +SG+K PL++LH KR
Sbjct: 389 EWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQLEAVVKELYNKSGSKKQPLILLHKKR 448
Query: 368 LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
+ +L ENP+HRNLVEEW VLY TP GSNDDWYWLYAA KL+CLLVTNDEMRDHIFEL
Sbjct: 449 VNALLENPNHRNLVEEWINNNVLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFEL 508
Query: 428 LGSNFFLKWKERHQT 442
L ++FF KWKERHQ
Sbjct: 509 LSNSFFQKWKERHQV 523
>gi|449480803|ref|XP_004156000.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus]
Length = 538
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/439 (60%), Positives = 341/439 (77%), Gaps = 5/439 (1%)
Query: 6 STNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL 65
ST +K KK K N +PE F ++L C++ KDL +AI+L E+A S+ L+ + HFN LL
Sbjct: 3 STGSAKARKKSK-NQSPEVKFQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQHFNTLL 61
Query: 66 YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIK 125
YLCS + +DPS K+SA+ GFRV++ + S VIPNEA+VT+VARLAA+K DGD AF L+K
Sbjct: 62 YLCSTAISDPSLKESAVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSAFELVK 121
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
+ ++ V PRLRTYDPAL CFCENLE +KAYEVE+HM G+ LE+ +I+ALLK+S++T
Sbjct: 122 TIG-KYKVTPRLRTYDPALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLKLSSDT 180
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVLKNGGG 242
G+ +KVY+YL KLR V+CV+E T KIIE WF +K + + + D+GL++ A+L NGGG
Sbjct: 181 GKEDKVYEYLHKLRRVVKCVSESTAKIIEGWFCSEKASDIGESTMDIGLIREAILSNGGG 240
Query: 243 WHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKA 302
WHG GWIG+G WVVKR +V SGKCC C QL VDI AETE FAQS+AALA+ERE +
Sbjct: 241 WHGKGWIGKGNWVVKRTNVYSSGKCCCCAQQLVGVDISCAETENFAQSLAALAIEREAQP 300
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
NF FQ+WLE + + +AIVDGAN+GLYQQNF + GF++ Q++AVVK+L + SG KWPLV+
Sbjct: 301 NFISFQEWLEVHNHCDAIVDGANVGLYQQNFADSGFNLSQVEAVVKELCKMSGGKWPLVL 360
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRD 422
HNKR R+ +N SHR +VEEW +KGVLY TP GSNDDWYWLYAAVKL+CLLVTNDEMRD
Sbjct: 361 WHNKRTRASLDNSSHRKVVEEWIDKGVLYSTPIGSNDDWYWLYAAVKLKCLLVTNDEMRD 420
Query: 423 HIFELLGSNFFLKWKERHQ 441
HIFELLG++ FL+WKE+HQ
Sbjct: 421 HIFELLGNDLFLRWKEKHQ 439
>gi|110741661|dbj|BAE98777.1| hypothetical protein [Arabidopsis thaliana]
Length = 517
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/435 (62%), Positives = 338/435 (77%), Gaps = 15/435 (3%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLCSDSATDPSSKDSA 81
E + LINL SC+K KDL+ A++LY++A S ++RL+ HF +LLYLCS +DPS + A
Sbjct: 30 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 89
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+SVT+VARLAA+K DGDYAF L+K + V VPRLRTY
Sbjct: 90 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 149
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
PAL CFC+ LEAEK YEVE+HM G+ LE+ EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 150 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 209
Query: 201 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 255
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 210 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 269
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK-------ANFSEFQ 308
VK+G+V +GKC SC + LACVD ++ ETE F S+ LAMER+ K A+FSEFQ
Sbjct: 270 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 329
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKR 367
+WLEK+ +YEAI+DGANIGLYQQNF +GGFS+PQL+AVVK+LY +SG+K PL++LH KR
Sbjct: 330 EWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQLEAVVKELYNKSGSKKQPLILLHKKR 389
Query: 368 LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
+ +L ENP+HRNLVEEW VLY TP GSNDDWYWLYAA KL+CLLVTNDEMRDHIFEL
Sbjct: 390 VNALLENPNHRNLVEEWINNNVLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFEL 449
Query: 428 LGSNFFLKWKERHQT 442
L ++FF KWKERHQ
Sbjct: 450 LSNSFFQKWKERHQV 464
>gi|297836360|ref|XP_002886062.1| hypothetical protein ARALYDRAFT_899980 [Arabidopsis lyrata subsp.
lyrata]
gi|297331902|gb|EFH62321.1| hypothetical protein ARALYDRAFT_899980 [Arabidopsis lyrata subsp.
lyrata]
Length = 531
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/449 (63%), Positives = 349/449 (77%), Gaps = 16/449 (3%)
Query: 10 SKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLC 68
S+PNKK+K + +PETN L NL SC+KSKDL+ A++LY++A S LRLS HF L+YLC
Sbjct: 17 SRPNKKKKISRSPETNLLFNLNSCSKSKDLSAALALYDAAVTSSELRLSQQHFQTLVYLC 76
Query: 69 SDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
S S +D S + A+ GF +FD+M+S+ + PNEASVTSVARLAA+K DGDYAF ++K
Sbjct: 77 SASISDTSLRSLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGDGDYAFKVVKDFV 136
Query: 129 NEFNV-VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187
+ V +PRLRTY PAL CFCE L+A+ YEVEEHM G++LE+ EI ALLKVSA TGR
Sbjct: 137 SVGGVSIPRLRTYAPALLCFCERLDADMGYEVEEHMEAAGIALEEAEILALLKVSAATGR 196
Query: 188 VEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGG 242
KVY+YL KLR V CV EET KIIE+WF G+K NG+ D+G+++ AVLKNGGG
Sbjct: 197 ENKVYRYLHKLREYVGCVCEETSKIIEEWFCGEKAGEVSDNGIGSDVGMLREAVLKNGGG 256
Query: 243 WHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKA 302
WHG GW+G+GKW VK+G+V +G+C SC +QLACVD ++ ET++F S+ ALAMER+ K
Sbjct: 257 WHGHGWVGEGKWTVKKGNVSSTGRCLSCREQLACVDTNEVETQKFVDSLVALAMERKAKM 316
Query: 303 N-------FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQ-LDAVVKKLYERS 354
N FSEFQDWLEK+ NYEAIVDGANIGLYQQNF +G FS+PQ L++VVK+LY S
Sbjct: 317 NSCETQVDFSEFQDWLEKHGNYEAIVDGANIGLYQQNFVDGSFSLPQQLESVVKELYRES 376
Query: 355 GN-KWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCL 413
GN KWPL++LH +R+R+L ENP+HRNLVEEW GVLY TP GSNDDWYWLYAA KL+CL
Sbjct: 377 GNNKWPLILLHKRRVRALLENPTHRNLVEEWISNGVLYPTPPGSNDDWYWLYAAAKLKCL 436
Query: 414 LVTNDEMRDHIFELLGSNFFLKWKERHQT 442
LVTNDEMRDHIFELLGS+FF KWKERHQ
Sbjct: 437 LVTNDEMRDHIFELLGSSFFHKWKERHQV 465
>gi|449466671|ref|XP_004151049.1| PREDICTED: proteinaceous RNase P 3-like [Cucumis sativus]
Length = 538
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/439 (60%), Positives = 341/439 (77%), Gaps = 5/439 (1%)
Query: 6 STNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL 65
ST +K KK K N +PE F ++L C++ KDL +AI+L E+A S+ L+ + HFN LL
Sbjct: 3 STGSAKARKKSK-NQSPEVKFQLDLTDCSRRKDLLSAITLCETAVSEKLKFNQQHFNTLL 61
Query: 66 YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIK 125
YLCS + +DPS K+SA+ GFRV++ + S VIPNEA+VT+VARLAA+K DGD AF L+K
Sbjct: 62 YLCSTAISDPSLKESAVSFGFRVYNLLQSIGVIPNEATVTAVARLAAAKRDGDSAFELVK 121
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
+ ++ V PRLRTYDPAL CFCENLE +KAYEVE+HM G+ LE+ +I+ALLK+S++T
Sbjct: 122 TIG-KYKVTPRLRTYDPALICFCENLEVDKAYEVEQHMNSAGVELEEPQISALLKLSSDT 180
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAVLKNGGG 242
G+ +KVY+YL KLR V+CV+E T KIIE WF +K + + + D+GL++ A+L NGGG
Sbjct: 181 GKEDKVYEYLHKLRRFVKCVSESTAKIIEGWFCSEKASDIGESTMDIGLIREAILSNGGG 240
Query: 243 WHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKA 302
WHG GWIG+G WVVKR +V SGKCC C QL VDI AETE FAQS+AALA+ERE +
Sbjct: 241 WHGKGWIGKGNWVVKRTNVYSSGKCCCCAQQLVGVDISCAETENFAQSLAALAIEREAQP 300
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
NF FQ+WLE + + +AIVDGAN+GLYQQNF + GF++ Q++AVVK+L + SG KWPLV+
Sbjct: 301 NFISFQEWLEVHNHCDAIVDGANVGLYQQNFADSGFNLSQVEAVVKELCKMSGGKWPLVL 360
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRD 422
HNKR R+ +N SHR +VEEW +KGVLY TP GSNDDWYWLYAAVKL+CLLVTNDEMRD
Sbjct: 361 WHNKRTRASLDNSSHRKVVEEWIDKGVLYSTPIGSNDDWYWLYAAVKLKCLLVTNDEMRD 420
Query: 423 HIFELLGSNFFLKWKERHQ 441
HIFELLG++ FL+WKE+HQ
Sbjct: 421 HIFELLGNDLFLRWKEKHQ 439
>gi|147844817|emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]
Length = 509
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/460 (59%), Positives = 335/460 (72%), Gaps = 42/460 (9%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
E F +L +C+K +DL+ A++L+ESA SQN RL +HFNALLYLC+ S +PSSK AL
Sbjct: 12 EGKFRFDLDTCSKRRDLSGAVALFESAVSQNFRLIHYHFNALLYLCTISIDEPSSKALAL 71
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
+GFR+FD M+++ V PNEA++T+VARLAA+K+DGD AF +++ M ++ + PRLRTY P
Sbjct: 72 DYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTM-GKYELSPRLRTYGP 130
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202
AL+ FC NLE EKA+ VEEHM MG+ E+ E+AALLKVSAE GR +KVY YL KLR+ V
Sbjct: 131 ALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTAV 190
Query: 203 RCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRG 259
R V+E T +IIE WF G+ +V GV C LG ++ LKNGGGWHG GWIG+GKW+V R
Sbjct: 191 RSVSESTAEIIEGWFCGEAASEVGGVDCCLGAIEEVALKNGGGWHGQGWIGKGKWLVCRA 250
Query: 260 SVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEA 319
VD SG+ CSC +QLA VDID AETE F +SVAA+AMEREV++NF EFQDWL+K+A+YEA
Sbjct: 251 KVDSSGR-CSCREQLATVDIDRAETETFLESVAAMAMEREVRSNFREFQDWLDKHADYEA 309
Query: 320 IVDGANIGLYQQNFTEGGFS-------------------------------------VPQ 342
IVDGANIGLYQQNF +P
Sbjct: 310 IVDGANIGLYQQNFANEQLDAVVKELYDRSQKKRPLVILHNKRFRKLSENASNRKRILPT 369
Query: 343 LDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWY 402
LDAVVK+LY+RS K PLVILHNKR R L EN S+R L++EW +GVLY TP+GSNDDWY
Sbjct: 370 LDAVVKELYDRSQKKRPLVILHNKRFRKLSENASNRKLLQEWLTQGVLYTTPNGSNDDWY 429
Query: 403 WLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
WLYAAVKL+CLLVTNDEMRDHIFELLGS+FFLKWKERHQ
Sbjct: 430 WLYAAVKLKCLLVTNDEMRDHIFELLGSSFFLKWKERHQV 469
>gi|115442469|ref|NP_001045514.1| Os01g0968000 [Oryza sativa Japonica Group]
gi|57899860|dbj|BAD87696.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113535045|dbj|BAF07428.1| Os01g0968000 [Oryza sativa Japonica Group]
Length = 548
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/431 (51%), Positives = 285/431 (66%), Gaps = 11/431 (2%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHS--QNLRLSLHHFNALLYLCSDSATDPSSK 78
P ++ L CT+ D A++ ++SA S RL H +N L +L + + D S
Sbjct: 21 GPNSDLSRTLTDCTRRGDAAAAMAAFDSALSGPDAPRLLAHQYNQLFHLLATA--DADSL 78
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND----GDYAFVLIKRMNNEFNVV 134
+A RVF ML + P+EA++TS+AR+ AS D AF L+ M +++ V
Sbjct: 79 PNAAAAARRVFSHMLGSGASPSEATITSLARVTASDASNPAAADEAFDLVATMRDKYGVA 138
Query: 135 PRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
PRLR+Y P L F EA KAY V+ HM ++ E+ EIAALL VSA+ G +KVY+Y
Sbjct: 139 PRLRSYSPVLAAFRRAGEAGKAYAVDAHMEASAVAPEEPEIAALLDVSAKAGDADKVYEY 198
Query: 195 LQKLRSTVRCVNEETGKIIEDWFSGQKV---NGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 251
+ KL TV CV EET +++E WF K D VK+A++ NGGG H LGW+G
Sbjct: 199 MHKLSRTVDCVGEETAEVLEGWFRSGKAAMAGKAEWDACKVKDAIVANGGGCHRLGWLGT 258
Query: 252 GKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWL 311
G W V+R V G+C CG +LACVDID ET+RFA SVA+LA++RE K NFS+FQ+WL
Sbjct: 259 GPWTVQRVRVGGDGQCEGCGCRLACVDIDVEETQRFADSVASLALQRETKINFSQFQEWL 318
Query: 312 EKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSL 371
E++ YEAIVDGANI LYQQNF EGGFS+ QLDAVV +L +R KWPLV+LHNKR+ L
Sbjct: 319 EEHGAYEAIVDGANIALYQQNFAEGGFSLTQLDAVVTELRDRYNGKWPLVVLHNKRIAKL 378
Query: 372 WENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSN 431
EN S+R+L+E W G LY +P GSNDDWYWLYAA++L CLLVTNDEMRDHIFELLGS+
Sbjct: 379 MENASNRHLIETWRANGALYTSPIGSNDDWYWLYAAIRLNCLLVTNDEMRDHIFELLGSS 438
Query: 432 FFLKWKERHQT 442
FF KWK+RHQ
Sbjct: 439 FFPKWKQRHQV 449
>gi|226491748|ref|NP_001150343.1| antiporter/ drug transporter/ transporter [Zea mays]
gi|195638562|gb|ACG38749.1| antiporter/ drug transporter/ transporter [Zea mays]
Length = 545
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/394 (53%), Positives = 269/394 (68%), Gaps = 10/394 (2%)
Query: 55 RLSLHHFNALLYL--CSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAA 112
RLS H +N LL+L +D ++ PS +A R RVF ML P+EA++TS+AR+ A
Sbjct: 55 RLSAHQYNQLLHLLAATDRSSFPSPPAAAAR---RVFAHMLQAAAPPSEATITSLARVIA 111
Query: 113 S--KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170
+ + D AF L+ M +++ + PRLR+Y P L F EA KAY VE HM G+S
Sbjct: 112 ADPASAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRRAGEAAKAYAVEAHMTASGVSP 171
Query: 171 EQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS---C 227
E+ E+AALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF +
Sbjct: 172 EEPELAALLDVSSRAGDADKVYEYMHKLRQAVHCVSEETAGVVEAWFRSDEAATAGKPQW 231
Query: 228 DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERF 287
D VK+A++ NGGG H LGW+G G W V+R V ++ +C C LAC+DID ET+RF
Sbjct: 232 DAAQVKDAIVANGGGCHRLGWLGTGPWTVQRVRVGDADQCGGCRFHLACIDIDMEETQRF 291
Query: 288 AQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVV 347
A SVA LA+ERE K NFS FQ+WLE N +Y+AIVDGANI LYQQNF EGGFS+ QLD V+
Sbjct: 292 ADSVAGLALERETKTNFSRFQEWLEANKDYQAIVDGANIALYQQNFAEGGFSLTQLDGVI 351
Query: 348 KKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAA 407
+L +R KWPLVILHNKR+ L EN S+R+L+E W G LY +P GSNDDWYWLYAA
Sbjct: 352 TELRDRYHGKWPLVILHNKRISKLMENSSNRHLIETWRTNGALYTSPSGSNDDWYWLYAA 411
Query: 408 VKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
+KL CLLVTNDEMRDHIFELLG +FF KWK+RH+
Sbjct: 412 IKLNCLLVTNDEMRDHIFELLGPSFFPKWKQRHR 445
>gi|194698092|gb|ACF83130.1| unknown [Zea mays]
Length = 521
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/394 (53%), Positives = 269/394 (68%), Gaps = 10/394 (2%)
Query: 55 RLSLHHFNALLYL--CSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAA 112
RLS H +N LL+L +D ++ PS +A R RVF ML P+EA++TS+AR+ A
Sbjct: 31 RLSAHQYNQLLHLLAATDRSSFPSPPAAAAR---RVFAHMLQAAAPPSEATITSLARVIA 87
Query: 113 S--KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170
+ + D AF L+ M +++ + PRLR+Y P L F EA KAY VE HM G+S
Sbjct: 88 ADPASAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRRAGEAAKAYAVEAHMTASGVSP 147
Query: 171 EQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS---C 227
E+ E+AALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF +
Sbjct: 148 EEPELAALLDVSSRAGDADKVYEYMHKLRQAVHCVSEETAGVVEAWFRSDEAATAGKPQW 207
Query: 228 DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERF 287
D VK+A++ NGGG H LGW+G G W V+R V ++ +C C LAC+DID ET+RF
Sbjct: 208 DAAQVKDAIVANGGGCHRLGWLGTGPWTVQRVRVGDADQCGGCRFHLACIDIDMEETQRF 267
Query: 288 AQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVV 347
A SVA LA+ERE K NFS FQ+WLE N +Y+AIVDGANI LYQQNF EGGFS+ QLD V+
Sbjct: 268 ADSVAGLALERETKTNFSRFQEWLEANKDYQAIVDGANIALYQQNFAEGGFSLTQLDGVI 327
Query: 348 KKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAA 407
+L +R KWPLVILHNKR+ L EN S+R+L+E W G LY +P GSNDDWYWLYAA
Sbjct: 328 TELRDRYHGKWPLVILHNKRISKLMENSSNRHLIETWRTNGALYTSPSGSNDDWYWLYAA 387
Query: 408 VKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
+KL CLLVTNDEMRDHIFELLG +FF KWK+RH+
Sbjct: 388 IKLNCLLVTNDEMRDHIFELLGPSFFPKWKQRHR 421
>gi|242046020|ref|XP_002460881.1| hypothetical protein SORBIDRAFT_02g036790 [Sorghum bicolor]
gi|241924258|gb|EER97402.1| hypothetical protein SORBIDRAFT_02g036790 [Sorghum bicolor]
Length = 526
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/447 (48%), Positives = 282/447 (63%), Gaps = 32/447 (7%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+T+T+ +P R+ + P + L CT RL+ H +N
Sbjct: 3 STATSRRRP---RRGSKGPNADLCRTLTDCT--------------------RLAAHQYNQ 39
Query: 64 LLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND-----GD 118
LL+L + + +A RVF ML P+EA++TS+AR+ A+ +D D
Sbjct: 40 LLHLLASADRSSFPGPAAAAAARRVFAHMLQAGAPPSEATITSLARVIAAADDPGSSAAD 99
Query: 119 YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAAL 178
AF L+ M +++ + PRLR+Y P L F EA KAY VE HM G+S E+ E+AAL
Sbjct: 100 EAFELVATMKDKYGLSPRLRSYGPVLAAFRSAGEAAKAYAVEAHMTASGVSPEEPELAAL 159
Query: 179 LKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK--VNGVS-CDLGLVKNA 235
L VS+ G +KVY+Y+ KLR V CV+EET ++E WF K + G S + VK+A
Sbjct: 160 LDVSSRAGDADKVYEYMHKLRQAVDCVSEETAGVVEAWFRSDKAAMAGKSEWNAAQVKDA 219
Query: 236 VLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALA 295
++ NGGG H LGW+G G W ++R V +C C +LAC+DID ET +FA SVA LA
Sbjct: 220 IVANGGGCHRLGWLGTGPWTMQRVRVGADDQCAGCRYRLACIDIDMEETRKFADSVAGLA 279
Query: 296 MEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQ-LDAVVKKLYERS 354
+ERE K NFS FQ+WLE N Y+AIVDGANI LYQQNF EGGFS+ Q LDAV+ +L +R
Sbjct: 280 LERETKTNFSRFQEWLEANKEYQAIVDGANIALYQQNFAEGGFSLTQQLDAVITELRDRY 339
Query: 355 GNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLL 414
KWPLVILHNKR+ L EN S+R+L+E W G LY +P GSNDDWYWLYAA+KL CLL
Sbjct: 340 HGKWPLVILHNKRIAKLMENSSNRHLIETWRTNGALYTSPSGSNDDWYWLYAAIKLNCLL 399
Query: 415 VTNDEMRDHIFELLGSNFFLKWKERHQ 441
VTNDEMRDHIFELLGS+FF KWK+RH+
Sbjct: 400 VTNDEMRDHIFELLGSSFFPKWKQRHR 426
>gi|388517681|gb|AFK46902.1| unknown [Medicago truncatula]
Length = 392
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/283 (69%), Positives = 227/283 (80%), Gaps = 3/283 (1%)
Query: 163 MGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV 222
M +G+SLE+ EIAALLKVSA+ GR ++VY YL KLRS V CV E T +IE+WF +
Sbjct: 1 MNSVGVSLEEAEIAALLKVSAKKGRADRVYMYLHKLRSGVTCVEESTATVIEEWFQSSEA 60
Query: 223 NGVS---CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDI 279
V D+ V+ AVL+NGGGWHGLGW+G+G WVV R SVD+ G CC CG+QL CVDI
Sbjct: 61 REVGEGDLDVTRVREAVLRNGGGWHGLGWVGKGDWVVSRMSVDDDGICCGCGEQLVCVDI 120
Query: 280 DDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFS 339
DD E E+FA SVAALA+EREVKANFSEFQ WLEK+ YEAIVDGAN+GLYQQNF +GGFS
Sbjct: 121 DDEEMEKFASSVAALAVEREVKANFSEFQGWLEKHGCYEAIVDGANVGLYQQNFADGGFS 180
Query: 340 VPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSND 399
QLD VVK+LY +SG KWPLV+LHNKR++ L ENPS R LVEEW + GVLY TP+GSND
Sbjct: 181 TNQLDDVVKELYNQSGRKWPLVVLHNKRVKGLMENPSSRKLVEEWMKNGVLYTTPNGSND 240
Query: 400 DWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
DWYWLYA VKLRCLLVTNDEMRDHIFELLGSNFF +WKERHQ
Sbjct: 241 DWYWLYATVKLRCLLVTNDEMRDHIFELLGSNFFNQWKERHQV 283
>gi|326509963|dbj|BAJ87198.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 588
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/430 (50%), Positives = 286/430 (66%), Gaps = 13/430 (3%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHS--QNLRLSLHHFNALLYLCSDSATDPSSK 78
P ++ L CT+ D A++ +++A S +LRL+ H +N LL+L + +A P
Sbjct: 63 GPNSDLSRTLTDCTRRGDAAAAMAAFDAAASGPDDLRLAAHQYNQLLHLLA-TAPFPGHP 121
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA---FVLIKRMNNEFNVVP 135
+A R RVF ML P+EA++TS+AR+ A+ D + A F L+ M +++ + P
Sbjct: 122 AAAAR---RVFAHMLGAGAAPSEATITSLARVVAADADAEGADEAFALVSTMRDKYGLAP 178
Query: 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
RLR+Y P L F +A KAY VE HM +S E+ E+AALL+VSA+ G +KVY+Y+
Sbjct: 179 RLRSYSPVLAAFRRAGDAGKAYAVEAHMAASAVSPEEPEVAALLEVSAKAGDADKVYEYM 238
Query: 196 QKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQG 252
KLR V CV EET +++E WF ++ D VK A++ GGG H LGW+ G
Sbjct: 239 HKLRRAVGCVTEETAEVLEGWFRSEEAAAAGKAEWDACRVKEAIVAKGGGCHQLGWLRTG 298
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE 312
W V+R V G+C CG +LA VDID +T +FA S++ LA+ERE KANFS FQ+WLE
Sbjct: 299 PWTVQRVRVAADGECGGCGCRLASVDIDMEDTHKFADSISGLALERETKANFSHFQEWLE 358
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
++ YEAIVDGANI LYQQNF+EGGFS+ QLDAVV +L +R KWPLV+LHNKR+ L
Sbjct: 359 EHKEYEAIVDGANIALYQQNFSEGGFSLVQLDAVVTELRDRYNGKWPLVVLHNKRIAKLM 418
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLG-SN 431
E PS+R+L+E W G LY +P GSNDDWYWLYAA+ L CLLVTNDEMRDHIFELLG S+
Sbjct: 419 ETPSNRHLIEIWRANGALYTSPSGSNDDWYWLYAAIGLNCLLVTNDEMRDHIFELLGSSS 478
Query: 432 FFLKWKERHQ 441
FF KWK+RH+
Sbjct: 479 FFYKWKQRHR 488
>gi|326517014|dbj|BAJ96499.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 544
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/431 (50%), Positives = 286/431 (66%), Gaps = 13/431 (3%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHS--QNLRLSLHHFNALLYLCSDSATDPSSK 78
P ++ L CT+ D A++ +++A S +LRL+ H +N LL+L + +A P
Sbjct: 19 GPNSDLSRTLTDCTRRGDAAAAMAAFDAAASGPDDLRLAAHQYNQLLHLLA-TAPFPGHP 77
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA---FVLIKRMNNEFNVVP 135
+A R RVF ML P+EA++TS+AR+ A+ D + A F L+ M +++ + P
Sbjct: 78 AAAAR---RVFAHMLGAGAAPSEATITSLARVVAADADAEGADEAFALVSTMRDKYGLAP 134
Query: 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
RLR+Y P L F +A KAY VE HM +S E+ E+AALL+VSA+ G +KVY+Y+
Sbjct: 135 RLRSYSPVLAAFRRAGDAGKAYAVEAHMAASAVSPEEPEVAALLEVSAKAGDADKVYEYM 194
Query: 196 QKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQG 252
KLR V CV EET +++E WF ++ D VK A++ GGG H LGW+ G
Sbjct: 195 HKLRRAVGCVTEETAEVLEGWFRSEEAAAAGKAEWDACRVKEAIVAKGGGCHQLGWLRTG 254
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE 312
W V+R V G+C CG +LA VDID +T +FA S++ LA+ERE KANFS FQ+WLE
Sbjct: 255 PWTVQRVRVAADGECGGCGCRLASVDIDMEDTHKFADSISGLALERETKANFSHFQEWLE 314
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
++ YEAIVDGANI LYQQNF+EGGFS+ QLDAVV +L +R KWPLV+LHNKR+ L
Sbjct: 315 EHKEYEAIVDGANIALYQQNFSEGGFSLVQLDAVVTELRDRYNGKWPLVVLHNKRIAKLM 374
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLG-SN 431
E PS+R+L+E W G LY +P GSNDDWYWLYAA+ L CLLVTNDEMRDHIFELLG S+
Sbjct: 375 ETPSNRHLIEIWRANGALYTSPSGSNDDWYWLYAAIGLNCLLVTNDEMRDHIFELLGSSS 434
Query: 432 FFLKWKERHQT 442
FF KWK+RH+
Sbjct: 435 FFYKWKQRHRV 445
>gi|449449619|ref|XP_004142562.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 588
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 287/439 (65%), Gaps = 16/439 (3%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
+K+ PE+ NL C+K + A+ LY+ A S ++L+ HH+N LLYLCS +
Sbjct: 96 RKKALKEAPESVLKYNLDMCSKYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCSSPSL 155
Query: 74 DPSS-----KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
+S L GF +F QM+++ V PNEA+ TS+AR+AA+++D + AF L+K+M
Sbjct: 156 LETSGANNLSSVVLSRGFEIFQQMMTDKVSPNEATFTSLARIAAARDDPEMAFSLVKQMK 215
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
++++ PRLR+Y PALF FC L ++AYEV+ HM + E+ E++ALLK+S++ +
Sbjct: 216 -DYHIAPRLRSYGPALFGFCRKLMPKEAYEVDSHMLASAVEPEELELSALLKLSSDVKKA 274
Query: 189 EKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHG 245
+KVY+ L +LR TVR V+E T K+IEDWF S +V D+ V+ +++ GGGWHG
Sbjct: 275 DKVYELLHRLRRTVRQVSEPTAKVIEDWFNSESASEVGKKHWDVDKVRECIVRRGGGWHG 334
Query: 246 LGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFS 305
GW+G GKW + R +D++G C SC +L C+DID ETE FA S+ LA +R VKA+F+
Sbjct: 335 EGWLGSGKWKLVRTGIDDNGVCHSCAQKLVCIDIDPKETEDFASSLTKLANQR-VKADFN 393
Query: 306 EFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILH 364
FQ WLEK+ ++A++DGAN+GL E F+ QL V ++ E S K PL+ILH
Sbjct: 394 NFQGWLEKHGPFDAVIDGANVGL----VNERQFNFIQLKRAVYQMRELSPSKKMPLIILH 449
Query: 365 NKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDH 423
+R+ NP++ L+E W G LY TP+ NDDWYWLYAAV+ +CLL+TNDEMRDH
Sbjct: 450 KRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYAAVRFKCLLLTNDEMRDH 509
Query: 424 IFELLGSNFFLKWKERHQT 442
+F+LLG+ FF +WKE+HQ
Sbjct: 510 LFQLLGNTFFPQWKEKHQV 528
>gi|357131791|ref|XP_003567517.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Brachypodium distachyon]
Length = 603
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/402 (52%), Positives = 262/402 (65%), Gaps = 7/402 (1%)
Query: 48 SAHSQNLRLSLHHFNALLYL--CSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVT 105
S ++LR + H +N LL+L +D ++ P + RVF ML +
Sbjct: 109 SGGPEDLRFAAHQYNQLLHLLASADRSSFPGGHPAVAASARRVFAHMLEATTAAPAEATI 168
Query: 106 -SVARLAAS-KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
S+AR+ AS GD AF L+ M + + PRLR+Y P L F EA KAY VE HM
Sbjct: 169 TSLARVIASDPGGGDEAFELVATMRERYGLAPRLRSYGPVLAAFRRTGEAGKAYAVEAHM 228
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV- 222
+S E+ E+AALL VSA+ G +KVY+Y+ KLR V CV+ ET +++E WF +K
Sbjct: 229 AASAVSPEEPELAALLDVSAKAGDADKVYEYMHKLRRAVACVSLETAEVLEGWFQSEKAA 288
Query: 223 --NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDID 280
D VK+A++ NGGG H LGW+ G WVV+R +V G+C CG LA VDID
Sbjct: 289 MAGKAEWDAQQVKDAIVANGGGCHQLGWLQNGPWVVRRATVGTDGECGGCGCCLASVDID 348
Query: 281 DAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSV 340
ET+ FA SV+ LA+ERE KANFS FQ+WLE + YEAIVDGANI LYQQNF +GGFS+
Sbjct: 349 MEETQTFADSVSGLALERETKANFSHFQEWLEAHQEYEAIVDGANIALYQQNFADGGFSL 408
Query: 341 PQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDD 400
QLDAVV +L +R KWPLVILHNKR+ L ENPS R+L+E W G LY +P GSNDD
Sbjct: 409 VQLDAVVTELRDRYSGKWPLVILHNKRIAKLMENPSDRHLIETWRANGALYTSPSGSNDD 468
Query: 401 WYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
WYWLYAA+ L CLLVTNDEMRDHIFELLGS+FF KWK+RH+
Sbjct: 469 WYWLYAAIGLNCLLVTNDEMRDHIFELLGSSFFHKWKQRHRV 510
>gi|110741376|dbj|BAF02238.1| hypothetical protein [Arabidopsis thaliana]
Length = 440
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/335 (58%), Positives = 253/335 (75%), Gaps = 14/335 (4%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLCSDSATDPSSKDSA 81
E + LINL SC+K KDL+ A++LY++A S ++RL+ HF +LLYLCS +DPS + A
Sbjct: 89 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 148
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+SVT+VARLAA+K DG YAF L+K + V VPRLRTY
Sbjct: 149 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGGYAFKLVKDLVAVGGVSVPRLRTY 208
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
PAL CFC+ LEAEK YEVE+HM G+ LE+ EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 209 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 268
Query: 201 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 255
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 269 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 328
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK-------ANFSEFQ 308
VK+G+V +GKC SC + LACVD ++ ETE F S+ LAMER+ K A+FSEFQ
Sbjct: 329 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 388
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
+WLEK+ +YEAI+DGANIGLYQQNF +GGFS+PQ+
Sbjct: 389 EWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQV 423
>gi|222619946|gb|EEE56078.1| hypothetical protein OsJ_04901 [Oryza sativa Japonica Group]
Length = 484
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/391 (51%), Positives = 257/391 (65%), Gaps = 23/391 (5%)
Query: 55 RLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASK 114
RL H +N L +L + + D S +A RVF ML + P+EA++TS+AR+ AS
Sbjct: 15 RLLAHQYNQLFHLLATA--DADSLPNAAAAARRVFSHMLGSGASPSEATITSLARVTASD 72
Query: 115 NDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE 174
A + F++V +R + KAY V+ HM ++ E+ E
Sbjct: 73 ASNPAA------ADEAFDLVATMRD------------KPGKAYAVDAHMEASAVAPEEPE 114
Query: 175 IAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV---NGVSCDLGL 231
IAALL VSA+ G +KVY+Y+ KL TV CV EET +++E WF K D
Sbjct: 115 IAALLDVSAKAGDADKVYEYMHKLSRTVDCVGEETAEVLEGWFRSGKAAMAGKAEWDACK 174
Query: 232 VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSV 291
VK+A++ NGGG H LGW+G G W V+R V G+C CG +LACVDID ET+RFA SV
Sbjct: 175 VKDAIVANGGGCHRLGWLGTGPWTVQRVRVGGDGQCEGCGCRLACVDIDVEETQRFADSV 234
Query: 292 AALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLY 351
A+LA++RE K NFS+FQ+WLE++ YEAIVDGANI LYQQNF EGGFS+ QLDAVV +L
Sbjct: 235 ASLALQRETKINFSQFQEWLEEHGAYEAIVDGANIALYQQNFAEGGFSLTQLDAVVTELR 294
Query: 352 ERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR 411
+R KWPLV+LHNKR+ L EN S+R+L+E W G LY +P GSNDDWYWLYAA++L
Sbjct: 295 DRYNGKWPLVVLHNKRIAKLMENASNRHLIETWRANGALYTSPIGSNDDWYWLYAAIRLN 354
Query: 412 CLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
CLLVTNDEMRDHIFELLGS+FF KWK+RHQ
Sbjct: 355 CLLVTNDEMRDHIFELLGSSFFPKWKQRHQV 385
>gi|225447818|ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 526
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 301/448 (67%), Gaps = 12/448 (2%)
Query: 2 SNTTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHF 61
S+ + S +K+ +PE L C+K D+ A+ LY+ A S+ + LS HH+
Sbjct: 22 SSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSRGVPLSQHHY 81
Query: 62 NALLYLCSDSAT--DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDY 119
N LLYLCS S + D + + AL+ GF +F QM + + PNEA+ TS ARLA + D +
Sbjct: 82 NVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEM 141
Query: 120 AFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
AF L+K+M + + P+LR+Y P LF FC+ +A++AYEV+ HM G+ E+ E+ ALL
Sbjct: 142 AFNLVKQMKS-CGIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALL 200
Query: 180 KVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAV 236
+S E+ RV++VY+ + +LR++VR V+E T +++E WF+ + GV + D+G V+ V
Sbjct: 201 GLSVESRRVDRVYEMVHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGV 260
Query: 237 LKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM 296
+K GGGWHG GW+G+GKW V R +DE+G C SCG++L C+DID ETE FA S+ LA
Sbjct: 261 VKGGGGWHGQGWLGKGKWKVVRTEMDEAGVCQSCGEKLVCIDIDPRETENFASSLTKLAC 320
Query: 297 EREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGN 356
+REVKA+F +FQ+WL+++ ++A+VDGAN+ L Q FS +L++VV +L + S +
Sbjct: 321 QREVKADFVQFQEWLQRHGPFDAVVDGANVSLINQK----SFSFFELNSVVNRLRQISPS 376
Query: 357 K-WPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLL 414
K PLVILH R+ +NP+++ L+E W + G LY TP GSNDDWYWLYAAV CLL
Sbjct: 377 KRLPLVILHRSRVTGGPAQNPNNKKLIESWKKSGALYATPAGSNDDWYWLYAAVNCNCLL 436
Query: 415 VTNDEMRDHIFELLGSNFFLKWKERHQT 442
VTNDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 437 VTNDEMRDHLFQLLGTSFFPRWKEKHQV 464
>gi|356527775|ref|XP_003532483.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 724
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/480 (42%), Positives = 282/480 (58%), Gaps = 64/480 (13%)
Query: 22 PETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT-------- 73
PE L C+K D+ A+SLY+SA S+ ++L HH+ LLYLCS +A
Sbjct: 105 PEVKLKNALDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTVLLYLCSSAAVGVVRPAKS 164
Query: 74 -----------------------------------DPSSKDSAL-----------RHGFR 87
+ + KD L + GF
Sbjct: 165 GSGARTLNSHVYSNEVPNEGTHFDLDGKAELNSDLNSTEKDEILLVSEDVKRYALQRGFE 224
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
V+ M + V NEA++T+VAR+A S DGD AF ++++M + + PRLR+Y PALF F
Sbjct: 225 VYQNMCLDKVQMNEAALTAVARMAMSMGDGDRAFEMVRQM-KDLGISPRLRSYGPALFTF 283
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207
C N E +KA+ VE+HM G+ E+ E+ ALL+VS G +KVY L KLRS VR V+
Sbjct: 284 CNNGEIDKAFAVEKHMLQHGVYPEEPELEALLRVSVGAGNSDKVYYVLHKLRSIVRKVSP 343
Query: 208 ETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDES 264
T +I DWF ++ + V D L++ A+ NGGGWHG GW+G+GKW ++ +
Sbjct: 344 TTSSLIVDWFKSKQASRVGKRKWDERLIREAIENNGGGWHGQGWLGKGKWEAVHTTIGKD 403
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGA 324
G C C QL +D+D ETE FA+SVA+LA+ RE +NF +FQ WL+ + +EA+VD A
Sbjct: 404 GMCKCCQVQLTTIDLDPVETENFAKSVASLAVMREKGSNFQKFQKWLDYSGPFEAVVDAA 463
Query: 325 NIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRS-LWENPSHRNLVE 382
N+GL+ Q G F +++AV ++ +R K+PL+ILHNKR++ + P +R L++
Sbjct: 464 NVGLFGQ----GRFMPHKINAVANEIRQRLPSKKFPLIILHNKRIKGDKMDEPINRALID 519
Query: 383 EWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
+WN LY TP GSNDDWYWLYAA+K RCLLVTNDEMRDH+F+LLG++FF KWKERHQ
Sbjct: 520 KWNNADALYATPTGSNDDWYWLYAAIKFRCLLVTNDEMRDHLFQLLGNDFFPKWKERHQV 579
>gi|357454841|ref|XP_003597701.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486749|gb|AES67952.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/449 (47%), Positives = 299/449 (66%), Gaps = 14/449 (3%)
Query: 3 NTTST-NPSKPNKKRKTNPNPETNFLI---NLQSCTKSKDLTTAISLYESAHSQNLRLSL 58
NT ST +P K + K + E+ I L +C+K+ D+ A++LY+ A ++ L+L
Sbjct: 58 NTESTTHPIKLSTKARRKAAQESPVGILQKKLNNCSKTSDVLQALNLYDEARKAHVPLNL 117
Query: 59 HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGD 118
H+N LLYLC+ D S L+ GF +F+QML +NV PNEA+ T+ ARLAA+K D +
Sbjct: 118 DHYNKLLYLCTVQNGDGSFFHLGLQRGFEIFEQMLRDNVEPNEATFTNAARLAAAKEDPE 177
Query: 119 YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAAL 178
AF L+K+M + P+LR+Y PAL+ FC +A KAYEV++ M G+ E+ E+ AL
Sbjct: 178 MAFELLKQM-KRVGIAPKLRSYGPALYGFCARGDAMKAYEVDDDMIESGVMAEEDELCAL 236
Query: 179 LKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNA 235
L+VS E +KVY+ L +LR+ VR V+E T K+IEDWF + K+ D ++
Sbjct: 237 LEVSVEVKNEDKVYEILHRLRAVVRQVSESTLKVIEDWFESEYAMKIGKREWDDEEIREG 296
Query: 236 VLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALA 295
++ GGGWHG GW+G G+W V + +VDE G C SC ++L +DID ETE FA S++ LA
Sbjct: 297 FVRGGGGWHGQGWLGSGEWKVVKTNVDEDGMCLSCSEKLVSIDIDPKETENFAASLSKLA 356
Query: 296 MEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSG 355
E++ KANF+ FQ WLEKN ++A+VDGAN+GL N E FS QLD VV++L + S
Sbjct: 357 HEKQPKANFNHFQKWLEKNGPFDAVVDGANVGL--ANIAE--FSFKQLDYVVRQLRQLSP 412
Query: 356 NK-WPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCL 413
+K PL+ILH R+ +NP+++ L+E W + GVLY TPHGSNDDWYWLYAAV +CL
Sbjct: 413 SKRLPLIILHVNRVTGGPAQNPNNKRLIENWKKNGVLYATPHGSNDDWYWLYAAVSCKCL 472
Query: 414 LVTNDEMRDHIFELLGSNFFLKWKERHQT 442
L+TNDEMRDH+F+LLGS+FF +WKE+HQ
Sbjct: 473 LLTNDEMRDHLFQLLGSSFFPRWKEKHQV 501
>gi|406855803|pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
gi|406855805|pdb|4G26|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Ca
Length = 501
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/446 (47%), Positives = 297/446 (66%), Gaps = 13/446 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A ++LS +H+N
Sbjct: 7 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 66
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLY+CS ++AT+ SS + L GF +F QM+ + V+PNEA+ T+ ARLA +K+D + AF
Sbjct: 67 LLYVCSLAEAATE-SSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 125
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
++K+M F + PRLR+Y PALF FC +A+KAYEV+ HM + E+ E+AALLKV
Sbjct: 126 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 184
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 238
S +T +KVY+ LQ+LR VR V++ T +IE+WF + K D+ +++AV+
Sbjct: 185 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 244
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G GKW VKR +DE+G C C ++L C+DI+ ETE FA S+ LA ER
Sbjct: 245 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 304
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK- 357
EVKANF++FQ+WLE++ ++A++DGAN+GL Q FS QL+ V++ + S +K
Sbjct: 305 EVKANFNQFQEWLERHGPFDAVIDGANMGLVNQR----SFSFFQLNNTVQRCQQISPSKR 360
Query: 358 WPLVILHNKRLRSLWEN-PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVT 416
PLVILH R+ P +R L+E+W G LY TP GSNDDWYWLYAAV +CLLVT
Sbjct: 361 LPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGSNDDWYWLYAAVSCKCLLVT 420
Query: 417 NDEMRDHIFELLGSNFFLKWKERHQT 442
NDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 421 NDEMRDHLFQLLGNSFFPRWKEKHQV 446
>gi|30685224|ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
gi|75115346|sp|Q66GI4.1|PRRP1_ARATH RecName: Full=Proteinaceous RNase P 1, chloroplastic/mitochondrial;
AltName: Full=Pentatricopeptide repeat-containing
protein At2g32230; Flags: Precursor
gi|51536606|gb|AAU05541.1| At2g32230 [Arabidopsis thaliana]
gi|330253558|gb|AEC08652.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
Length = 572
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 296/446 (66%), Gaps = 13/446 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A ++LS +H+N
Sbjct: 78 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 137
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLY+CS ++AT+ SS + L GF +F QM+ + V+PNEA+ T+ ARLA +K+D + AF
Sbjct: 138 LLYVCSLAEAATE-SSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 196
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
++K+M F + PRLR+Y PALF FC +A+KAYEV+ HM + E+ E+AALLKV
Sbjct: 197 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 255
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLK 238
S +T +KVY+ LQ+LR VR V++ T +IE+WF + D+ +++AV+
Sbjct: 256 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 315
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G GKW VKR +DE+G C C ++L C+DI+ ETE FA S+ LA ER
Sbjct: 316 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 375
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK- 357
EVKANF++FQ+WLE++ ++A++DGAN+GL Q FS QL+ V++ + S +K
Sbjct: 376 EVKANFNQFQEWLERHGPFDAVIDGANMGLVNQR----SFSFFQLNNTVQRCQQISPSKR 431
Query: 358 WPLVILHNKRLRSLWEN-PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVT 416
PLVILH R+ P +R L+E+W G LY TP GSNDDWYWLYAAV +CLLVT
Sbjct: 432 LPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGSNDDWYWLYAAVSCKCLLVT 491
Query: 417 NDEMRDHIFELLGSNFFLKWKERHQT 442
NDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 492 NDEMRDHLFQLLGNSFFPRWKEKHQV 517
>gi|20259520|gb|AAM13880.1| unknown protein [Arabidopsis thaliana]
Length = 572
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/446 (47%), Positives = 295/446 (66%), Gaps = 13/446 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A ++LS +H+N
Sbjct: 78 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 137
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLY+CS ++AT+ SS + L GF +F QM+ + V+PNEA+ T+ ARLA +K+D + AF
Sbjct: 138 LLYVCSLAEAATE-SSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 196
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
++K+M F + PRLR+Y PALF FC +A+KAYEV+ HM + E+ E+ ALLKV
Sbjct: 197 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELVALLKV 255
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLK 238
S +T +KVY+ LQ+LR VR V++ T +IE+WF + D+ +++AV+
Sbjct: 256 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 315
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G GKW VKR +DE+G C C ++L C+DI+ ETE FA S+ LA ER
Sbjct: 316 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 375
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK- 357
EVKANF++FQ+WLE++ ++A++DGAN+GL Q FS QL+ V++ + S +K
Sbjct: 376 EVKANFNQFQEWLERHGPFDAVIDGANMGLVNQR----SFSFFQLNNTVQRCQQISPSKR 431
Query: 358 WPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVT 416
PLVILH R+ P +R L+E+W G LY TP GSNDDWYWLYAAV +CLLVT
Sbjct: 432 LPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGSNDDWYWLYAAVSCKCLLVT 491
Query: 417 NDEMRDHIFELLGSNFFLKWKERHQT 442
NDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 492 NDEMRDHLFQLLGNSFFPRWKEKHQV 517
>gi|224134767|ref|XP_002327484.1| predicted protein [Populus trichocarpa]
gi|222836038|gb|EEE74459.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/434 (47%), Positives = 285/434 (65%), Gaps = 12/434 (2%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
KK+ PE L +C+K D+ + LY+ A + L+ HH+N LLYLCS +
Sbjct: 6 KKKARREAPEGVLKFKLDTCSKRGDVVEGLRLYDEARKNGVELNQHHYNVLLYLCSQNGG 65
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
+ S + GF +F QM+ + V PNEA+ T+ ARLA++ D + AF L+K+M F +
Sbjct: 66 ENVS--DLRKQGFEIFQQMIIDKVPPNEATFTNAARLASAMEDPEMAFDLVKQMKG-FGI 122
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+P+LR+Y P LF FC+ A+KAYEV+ HM G+ E+ E++ALLKVSA+ +KVY+
Sbjct: 123 LPKLRSYGPPLFGFCKKGMADKAYEVDAHMIEYGVVAEEPELSALLKVSADVNNADKVYE 182
Query: 194 YLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIG 250
L +LR++VR E T IIEDWF + K + D+ VK V + GGGWHG GW+G
Sbjct: 183 LLHRLRTSVRQATESTVGIIEDWFKSKHAAKTGKENWDVRKVKEGVARGGGGWHGQGWLG 242
Query: 251 QGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDW 310
G+W V R +D+ G C SCG++LAC+DID ETE FA S++ LA+ REVKA+F FQDW
Sbjct: 243 CGQWRVVRTQMDKEGVCGSCGERLACIDIDPRETEDFAISLSKLALGREVKADFIRFQDW 302
Query: 311 LEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILHNKRLR 369
L+++ ++A+VDGAN+ L Q FS QL++VV +L++ S K PLVILH R+
Sbjct: 303 LQRHGPFDAVVDGANLSLINQQ----TFSFSQLNSVVHRLHDMSPSKKLPLVILHKSRVT 358
Query: 370 -SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELL 428
++P ++ L+E W G LY+TP GSNDDWYWLYAAV +CLLVTNDEMRDH+F+LL
Sbjct: 359 GGPAQSPYNKKLLERWKNSGALYVTPAGSNDDWYWLYAAVCYKCLLVTNDEMRDHLFQLL 418
Query: 429 GSNFFLKWKERHQT 442
G++FF +WKE+HQ
Sbjct: 419 GTSFFPRWKEKHQV 432
>gi|414878559|tpg|DAA55690.1| TPA: antiporter/ drug transporter/ transporter [Zea mays]
Length = 599
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/396 (49%), Positives = 254/396 (64%), Gaps = 12/396 (3%)
Query: 55 RLSLHHFNALLYL--CSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAA 112
RLS H +N LL+L +D ++ PS +A R RVF ML P+EA++TS+AR+ A
Sbjct: 109 RLSAHQYNQLLHLLAATDRSSFPSPPAAAAR---RVFAHMLQAAAPPSEATITSLARVIA 165
Query: 113 S--KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170
+ + D AF L+ M +++ + PRLR+Y P L F EA KAY VE HM G+S
Sbjct: 166 ADPASAADEAFELVATMKDKYGLSPRLRSYGPVLAAFRRAGEAAKAYAVEAHMTASGVSP 225
Query: 171 EQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS---C 227
E+ E+AALL VS+ G +KVY+Y+ KLR V CV+EET ++E WF +
Sbjct: 226 EEPELAALLDVSSRAGDADKVYEYMHKLRQAVHCVSEETAGVVEAWFRSDEAATAGKPQW 285
Query: 228 DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKR-GSVDESGKCCSCGDQLACVDIDDAETER 286
D VK+A++ NGGG W+ + + G ++ +C C LAC+DID
Sbjct: 286 DAAQVKDAIVANGGGC-PPPWVAWNPALDRAAGKSGDADQCGGCRFHLACIDIDMERHRG 344
Query: 287 FAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAV 346
+ LA+ERE K NFS FQ+WLE N +Y+AIVDGANI LYQQNF EGGFS+ QLD V
Sbjct: 345 LLIPLLGLALERETKTNFSRFQEWLEANKDYQAIVDGANIALYQQNFAEGGFSLTQLDGV 404
Query: 347 VKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYA 406
+ +L +R KWPLVILHNKR+ L EN S+R+L+E W G LY +P GSNDDWYWLYA
Sbjct: 405 ITELRDRYHGKWPLVILHNKRISKLMENSSNRHLIETWRTNGALYTSPSGSNDDWYWLYA 464
Query: 407 AVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
A+KL CLLVTNDEMRDHIFELLG +FF KWK+RH+
Sbjct: 465 AIKLNCLLVTNDEMRDHIFELLGPSFFPKWKQRHRV 500
>gi|356562261|ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 550
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 294/445 (66%), Gaps = 13/445 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
TT+ S ++++ +PE L L C+K D+ A+ Y+ A + LSL H+N
Sbjct: 54 TTTIKLSSKSRRKAFYESPEGVLLRKLNECSKDGDVIQALRHYDEARKLGVLLSLDHYNK 113
Query: 64 LLYLCS-DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFV 122
LLYLCS +SA L+ GF +F QML++ V PNEA+ T+ ARLAA+K D D AF
Sbjct: 114 LLYLCSVESAA--GVPHLGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFE 171
Query: 123 LIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182
L+K+M N + P+LR+Y+PALF FC+ +AEKAY V+ M G+ E+ E++ALL+VS
Sbjct: 172 LLKQMKN-VAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEVS 230
Query: 183 AETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKN 239
+ +KVY+ L +LR+T+R V+E T I+E+WF+ + K+ D+ V+ + +
Sbjct: 231 VNANKEDKVYEVLHRLRATLRQVSESTLGIVENWFNSEYAAKIGKEKWDVKKVREGIARG 290
Query: 240 GGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMERE 299
GGGWHG GW+G G+W V V+E G C SCG++LA +DID ETE FA S++ LA ++E
Sbjct: 291 GGGWHGQGWLGSGRWKVVNTQVNEDGVCLSCGEKLASIDIDPKETENFAASLSKLACQKE 350
Query: 300 VKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-W 358
KANF FQ WLE++ ++A+VDGAN+GL + FS QL+ VV++L + S +K
Sbjct: 351 AKANFVHFQTWLERHGPFDAVVDGANVGLANGH----NFSFSQLNTVVEQLRQISPSKRL 406
Query: 359 PLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTN 417
PL+ILH R+ +NP ++ L+E W + GVLY TP GSNDDWYWLYAAV +CLL+TN
Sbjct: 407 PLIILHISRVHGGPAQNPKNKRLIENWKKNGVLYATPQGSNDDWYWLYAAVSCKCLLLTN 466
Query: 418 DEMRDHIFELLGSNFFLKWKERHQT 442
DEMRDH+F+LLGSNFF +WKE+HQ
Sbjct: 467 DEMRDHLFQLLGSNFFPRWKEKHQV 491
>gi|297826669|ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327056|gb|EFH57476.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 572
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 293/446 (65%), Gaps = 13/446 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A ++LS +H+N
Sbjct: 78 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 137
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLY+CS ++AT+ SS + L GF +F QM+ + V+PNEA+ T+ ARLA +K+D + AF
Sbjct: 138 LLYVCSLAEAATE-SSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 196
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
++K+M F + PRLR+Y PALF FC +A KAYEV+ HM + E+ E+AALLKV
Sbjct: 197 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDAGKAYEVDAHMVESEVVPEEPELAALLKV 255
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLK 238
S +T +KVY+ LQ+LR VR V++ T IE+WF + D+ +++AV
Sbjct: 256 SMDTKNADKVYEMLQRLRDLVRQVSKSTFDTIEEWFKSEAAAKAGVKKWDVKKIRDAVES 315
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G GKW VKR +DE+G C C ++L C+DI+ ETE FA S+ LA ER
Sbjct: 316 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 375
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK- 357
EVKANF++FQ+WLE++ ++A++DGAN+GL Q FS QL+ V++ + S +K
Sbjct: 376 EVKANFNQFQEWLERHGPFDAVIDGANMGLVNQR----SFSFFQLNNTVQRCQQISPSKR 431
Query: 358 WPLVILHNKRLRSLWEN-PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVT 416
PLVILH R+ P +R L+E+W G LY TP GSNDDWYWLYAAV +CLLVT
Sbjct: 432 LPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGSNDDWYWLYAAVTYKCLLVT 491
Query: 417 NDEMRDHIFELLGSNFFLKWKERHQT 442
NDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 492 NDEMRDHLFQLLGNSFFPRWKEKHQV 517
>gi|302764204|ref|XP_002965523.1| hypothetical protein SELMODRAFT_84628 [Selaginella moellendorffii]
gi|300166337|gb|EFJ32943.1| hypothetical protein SELMODRAFT_84628 [Selaginella moellendorffii]
Length = 532
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/436 (44%), Positives = 282/436 (64%), Gaps = 13/436 (2%)
Query: 13 NKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA 72
KK+K P+ E F L+SC+K D+T A+ +Y+S+ Q ++LS +H+N LLYLCS +A
Sbjct: 41 QKKKKFTPDSELRF--KLESCSKVGDVTGALDIYDSSKDQGVKLSQYHYNVLLYLCSSAA 98
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
AL G ++++M + NEA+ TS+ARLA +K DGD AF L+K M
Sbjct: 99 L---GVILALDRGLEIYERMKLEGISANEAAFTSIARLAVAKRDGDLAFSLVKEMTTS-G 154
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
+ P+LR+Y PAL+ + ++ +KA+EV++HM G+ E+ E+ LL++S + G+ ++VY
Sbjct: 155 ITPKLRSYGPALYTYFKSNRVDKAFEVDDHMRSFGVQPEEMELQILLELSLKAGQEQRVY 214
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC----DLGLVKNAVLKNGGGWHGLGW 248
L +LR +VR V+ T IE WFS + D V+ A+ GGG LGW
Sbjct: 215 SVLHRLRRSVREVSPSTATTIERWFSSDAASSSGSDKKYDDEDVRRALAAQGGGGLELGW 274
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN-FSEF 307
IG G+W VKR ++D SG C SC ++A VD++ ET RFA+++AALA E+E AN F EF
Sbjct: 275 IGSGRWSVKRTALDASGVCESCRHKMAAVDLNAEETNRFAENLAALACEKERDANSFKEF 334
Query: 308 QDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKR 367
Q+W+ ++ ++AIVDGAN+ L+ QNF+ GGFS QL++VV +L + G K PLVILH +R
Sbjct: 335 QEWMAEHGPFDAIVDGANVALFNQNFSAGGFSFSQLNSVVTELSNQHG-KSPLVILHKRR 393
Query: 368 LRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFE 426
+ +P + L+++W LY GSNDDWYWLYAAV +CLLV+NDEMRDH+F+
Sbjct: 394 VTGGPAASPQSQELLKQWTAANALYTAATGSNDDWYWLYAAVTCKCLLVSNDEMRDHLFQ 453
Query: 427 LLGSNFFLKWKERHQT 442
+LG++ F +WKERHQ
Sbjct: 454 MLGNDLFPRWKERHQV 469
>gi|2894568|emb|CAA17157.1| putative protein [Arabidopsis thaliana]
gi|7269035|emb|CAB79145.1| putative protein [Arabidopsis thaliana]
Length = 1094
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 241/335 (71%), Gaps = 30/335 (8%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLCSDSATDPSSKDSA 81
E + LINL SC+K KDL+ A++LY++A S ++RL+ HF +LLYLCS +DPS + A
Sbjct: 505 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 564
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+SVT+VARLAA+K DGDYAF L+K + V VPRLRTY
Sbjct: 565 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 624
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
PAL CFC+ LEAEK YEVE+HM G+ LE+ EI+ALLK KLR
Sbjct: 625 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLK----------------KLRE 668
Query: 201 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWV 255
V CV+EET K IE+WF G K NG+ D+ L++ AVLKNGGGWHGLGW+G+GKW+
Sbjct: 669 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 728
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK-------ANFSEFQ 308
VK+G+V +GKC SC + LACVD ++ ETE F S+ LAMER+ K A+FSEFQ
Sbjct: 729 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 788
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
+WLEK+ +YEAI+DGANIGLYQQNF +GGFS+PQ+
Sbjct: 789 EWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQI 823
>gi|302802496|ref|XP_002983002.1| hypothetical protein SELMODRAFT_117602 [Selaginella moellendorffii]
gi|300149155|gb|EFJ15811.1| hypothetical protein SELMODRAFT_117602 [Selaginella moellendorffii]
Length = 534
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/435 (44%), Positives = 281/435 (64%), Gaps = 13/435 (2%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
KK+K P+ E F L+SC+K D+T A+ +Y+S+ Q ++LS +H+N LLYLCS +A
Sbjct: 42 KKKKFTPDSELRF--KLESCSKVGDVTGALDIYDSSKDQGVKLSQYHYNVLLYLCSSAAL 99
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
AL G ++++M + NEA+ TS+ARLA +K DGD AF L+K M +
Sbjct: 100 ---GVILALDRGLEIYERMKLEGISANEAAFTSIARLAVAKRDGDLAFSLVKEMTTS-GI 155
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
P+LR+Y PAL+ + ++ + +KA+EV++HM G+ E+ E+ LL++S + G ++VY
Sbjct: 156 TPKLRSYGPALYTYFKSNQVDKAFEVDDHMRSFGVQPEEMELQILLELSLKAGLDQRVYS 215
Query: 194 YLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC----DLGLVKNAVLKNGGGWHGLGWI 249
L +LR +VR V+ T IE WFS + D V+ A+ GGG LGWI
Sbjct: 216 VLHRLRRSVREVSPSTATTIERWFSSDAASSSGSDKKYDDEDVRRALAAQGGGGLELGWI 275
Query: 250 GQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN-FSEFQ 308
G G W VKR ++D SG C SC ++A VD++ ET RFA+++AALA E+E AN F EFQ
Sbjct: 276 GSGGWSVKRTALDASGVCESCRHKMAAVDLNAEETNRFAENLAALACEKERDANSFKEFQ 335
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRL 368
+W+ ++ ++AIVDGAN+ L+ QNF+ GGFS QL++VV +L + G K PLVILH +R+
Sbjct: 336 EWMAEHGPFDAIVDGANVALFNQNFSAGGFSFSQLNSVVTELSNQHG-KSPLVILHKRRV 394
Query: 369 RS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
+P + L+++W LY GSNDDWYWLYAAV +CLLV+NDEMRDH+F++
Sbjct: 395 TGGPAASPQSQELLKQWTAANALYTAATGSNDDWYWLYAAVTCKCLLVSNDEMRDHLFQM 454
Query: 428 LGSNFFLKWKERHQT 442
LG++ F +WKERHQ
Sbjct: 455 LGNDLFPRWKERHQV 469
>gi|224077472|ref|XP_002305261.1| predicted protein [Populus trichocarpa]
gi|222848225|gb|EEE85772.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/439 (45%), Positives = 286/439 (65%), Gaps = 11/439 (2%)
Query: 10 SKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCS 69
SK KK+ PE L C+K D+ + LY+ A + L+ HH+N +LYLCS
Sbjct: 29 SKRLKKKARRDAPEGVLRFKLDMCSKVGDVVEGLRLYDEARRNGVELNQHHYNVMLYLCS 88
Query: 70 -DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
+ + S A + GF +F QM+ + V PNEA+ T+ ARLA+ D + AF L+K+M
Sbjct: 89 QNRGENGSDLKLACKRGFEIFQQMIIDKVPPNEATFTNAARLASVMEDPEMAFDLVKQMK 148
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
F ++P+LR+Y P LF FC+ +KAYEV+ HM G+ E+ E+++LLK+SA+
Sbjct: 149 G-FGIMPKLRSYGPPLFGFCKKGMVDKAYEVDAHMIESGVVAEEPELSSLLKLSADVNNA 207
Query: 189 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHG 245
+K+Y+ L +LR++VR V E T +IEDWF + K+ D+ VK V++ GGGWHG
Sbjct: 208 DKMYELLHRLRTSVRQVMESTVGVIEDWFKSEHAAKIGKGDWDVIKVKEGVVRGGGGWHG 267
Query: 246 LGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFS 305
GW+G G+W V R +D+ G C SCG++LAC+DID ETE FA S++ LA REVKA+F
Sbjct: 268 QGWLGHGQWRVVRTQMDKKGVCGSCGERLACIDIDPRETENFAISLSKLAFGREVKADFI 327
Query: 306 EFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILH 364
+FQ+WL+++ ++A+VDGAN+ L Q F+ QL+ VV +L++ S K+PLVILH
Sbjct: 328 QFQEWLQQHGPFDAVVDGANVSLINQQ----TFNFSQLNNVVNRLHDMSPSKKFPLVILH 383
Query: 365 NKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDH 423
R+ ++P ++ L+E W G LY TP GSNDDWYWLYAAV +CLLVTNDEMRDH
Sbjct: 384 KSRVNGGPAQSPYNKKLLERWKNSGALYATPAGSNDDWYWLYAAVSCKCLLVTNDEMRDH 443
Query: 424 IFELLGSNFFLKWKERHQT 442
+F+LLG++FF +WKE+HQ
Sbjct: 444 LFQLLGTSFFPRWKEKHQV 462
>gi|356553964|ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Glycine max]
Length = 559
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 288/446 (64%), Gaps = 15/446 (3%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
TT S +++ +PE L L C+K ++ A+ Y+ A + L+L H+N
Sbjct: 53 TTIVKLSSKARRKAFYESPEGVLLRKLNECSKDGNVAQALCHYDEARKLGVLLNLDHYNK 112
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLYLCS +A P + L+ GF VF QML++ V PNEA+ T+ ARLAA+ D D AF
Sbjct: 113 LLYLCSIESAAGFP---NLGLKRGFEVFQQMLNDRVQPNEATFTNAARLAAANEDPDMAF 169
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
L+K+M N + P+LR+Y+PALF FC+ +AEKAY V+ M G+ E+ E++ALL+V
Sbjct: 170 ELLKQMKN-VAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGIVAEEPELSALLEV 228
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 238
S + +KVY L +LRST+R V+E T I+EDWF+ + K+ D+ V+ + +
Sbjct: 229 SVNAKKEDKVYDILHRLRSTLRQVSESTLGIVEDWFNSEYAAKIGKEKWDVKKVREGIAQ 288
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G G+W V V+E G C CG++L +DID ETE FA S++ LA ++
Sbjct: 289 GGGGWHGQGWLGSGRWKVANTQVNEDGVCPLCGEKLVSIDIDPKETENFAASLSKLACQK 348
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK- 357
E KANF FQ WLE++ ++A+VDGAN+GL + FS QL+ VV++L + S +K
Sbjct: 349 EAKANFVHFQTWLEQHGPFDAVVDGANVGLANGH----NFSFSQLNTVVEQLRQISPSKR 404
Query: 358 WPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVT 416
PL+ILH R+R +NP + L+E W + G LY TP GSNDDWYWLYAAV +CLL+T
Sbjct: 405 LPLIILHISRVRGGPAQNPKNMRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLT 464
Query: 417 NDEMRDHIFELLGSNFFLKWKERHQT 442
NDEMRDH+F+LLGSNFF +WKE+HQ
Sbjct: 465 NDEMRDHLFQLLGSNFFPRWKEKHQV 490
>gi|225462213|ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 895
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 204/448 (45%), Positives = 294/448 (65%), Gaps = 12/448 (2%)
Query: 2 SNTTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHF 61
S+ + S +K+ +PE L C+K D+ A+ LY+ A S + LS H++
Sbjct: 391 SSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEARSLGVPLSQHNY 450
Query: 62 NALLYLCSDSAT--DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDY 119
N LLYLCS S + D + + AL+ GF +F QM + + PNEA+ TS ARLA + D +
Sbjct: 451 NVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSAARLACAMEDPEM 510
Query: 120 AFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
AF L+K+M + + P+LR+Y P LF FC+ +A +AYEV+ HM G+ E+ E+ ALL
Sbjct: 511 AFNLVKQMKS-CGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALL 569
Query: 180 KVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV---SCDLGLVKNAV 236
+S E+ V++VY+ + +LR++VR V+E T +++E WF+ + GV + D+G V+ V
Sbjct: 570 GLSVESRWVDQVYEMMHRLRASVRQVSESTAEVVERWFNSEDAAGVGEENWDVGKVREGV 629
Query: 237 LKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM 296
+K GGGWHG GW+G+GKW V R +DE+G C SCG++L +DID ETE FA S+ LA
Sbjct: 630 VKGGGGWHGQGWLGKGKWKVGRTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTKLAC 689
Query: 297 EREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGN 356
+REVKA+F +FQ+WL+ + ++A+VDGAN+ L Q FS +L++VV L + S +
Sbjct: 690 QREVKADFVQFQEWLQWHGPFDAVVDGANVSLINQK----SFSFFELNSVVNCLRQISPS 745
Query: 357 K-WPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLL 414
K PLVILH R+ +NP++ L++ W + G LY TP GSNDDWYWLYAAV CLL
Sbjct: 746 KQLPLVILHRSRVTGGPAQNPNNEKLIQSWKKSGALYATPAGSNDDWYWLYAAVNGNCLL 805
Query: 415 VTNDEMRDHIFELLGSNFFLKWKERHQT 442
VTNDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 806 VTNDEMRDHLFQLLGTSFFPRWKEKHQV 833
>gi|326518132|dbj|BAK07318.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 692
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 192/428 (44%), Positives = 274/428 (64%), Gaps = 17/428 (3%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESA--HSQNLRLSLHHFNALLYLCSDSATDPSSK 78
+PE L C++ DL TA+ LYE+A + + L+LHH+N LLYLCS+S
Sbjct: 86 SPEGLLKHRLDMCSRDADLATALQLYEAAVDPATAVPLALHHYNCLLYLCSNSG-----D 140
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
A R GF +F M + V PNEA++TS+ARLAA+ D AF +++RM + PRLR
Sbjct: 141 ADAARRGFEIFAAMEAQGVEPNEATLTSLARLAAAVRDPAMAFSVVRRMAAA-GIPPRLR 199
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+Y PALF +C+ +A A EVE HM G+ E+ E+ ALL+V+A+ GR ++VY+ L +
Sbjct: 200 SYGPALFAYCDARDANGAAEVEAHMDAGGVVPEETELTALLRVNADIGRADQVYRVLHRT 259
Query: 199 RSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQGKWV 255
R+ VR V + T +++E WF D V+ V+K GGGWHG GW+G+G+W
Sbjct: 260 RTLVRQVCQATAQVVEAWFRSDAAAEAGVDKWDARKVREGVVKGGGGWHGQGWLGKGQWD 319
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNA 315
V + +D+ G+C CG++L C+DID +ETE FA+S+A LA REV+ +F FQDWL ++
Sbjct: 320 VGQSEMDKDGRCQRCGEKLVCIDIDPSETETFAKSLAELACNREVRDDFVRFQDWLHRHG 379
Query: 316 NYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILHNKRLR-SLWE 373
++A++D AN+GLY+ FS Q+++VV + + K PL++LH R+ +
Sbjct: 380 PFDAVIDAANVGLYKSK----AFSFSQVNSVVNGIQRVTKSKKLPLIVLHRSRVNCGPAK 435
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFF 433
P ++ L+E W G LY TP GSNDDWYWLYAAV R LLVTNDEMRDH+F+LLG++FF
Sbjct: 436 TPQNQKLIESWRNAGALYSTPPGSNDDWYWLYAAVSCRSLLVTNDEMRDHLFQLLGTSFF 495
Query: 434 LKWKERHQ 441
+WKE+HQ
Sbjct: 496 PRWKEKHQ 503
>gi|406855802|pdb|4G23|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
gi|406855804|pdb|4G25|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana, Semet Substituted Form With Sr
Length = 501
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/446 (46%), Positives = 289/446 (64%), Gaps = 13/446 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A ++LS +H+N
Sbjct: 7 SPSENLSRKAKKKAIQQSPEALLKQKLDXCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 66
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLY+CS ++AT+ SS + L GF +F Q + + V+PNEA+ T+ ARLA +K+D + AF
Sbjct: 67 LLYVCSLAEAATE-SSPNPGLSRGFDIFKQXIVDKVVPNEATFTNGARLAVAKDDPEXAF 125
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
+K+ F + PRLR+Y PALF FC +A+KAYEV+ H + E+ E+AALLKV
Sbjct: 126 DXVKQXK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHXVESEVVPEEPELAALLKV 184
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLK 238
S +T +KVY+ LQ+LR VR V++ T IE+WF + K D+ +++AV+
Sbjct: 185 SXDTKNADKVYKTLQRLRDLVRQVSKSTFDXIEEWFKSEVATKTGVKKWDVKKIRDAVVS 244
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G GKW VKR DE+G C C ++L C+DI+ ETE FA S+ LA ER
Sbjct: 245 GGGGWHGQGWLGTGKWNVKRTEXDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 304
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK- 357
EVKANF++FQ+WLE++ ++A++DGAN GL Q FS QL+ V++ + S +K
Sbjct: 305 EVKANFNQFQEWLERHGPFDAVIDGANXGLVNQR----SFSFFQLNNTVQRCQQISPSKR 360
Query: 358 WPLVILHNKRLRSLWEN-PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVT 416
PLVILH R+ P +R L+E+W G LY TP GSNDDWYWLYAAV +CLLVT
Sbjct: 361 LPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGSNDDWYWLYAAVSCKCLLVT 420
Query: 417 NDEMRDHIFELLGSNFFLKWKERHQT 442
NDE RDH+F+LLG++FF +WKE+HQ
Sbjct: 421 NDEXRDHLFQLLGNSFFPRWKEKHQV 446
>gi|357520987|ref|XP_003630782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524804|gb|AET05258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/370 (48%), Positives = 253/370 (68%), Gaps = 10/370 (2%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ AL+ GF V++ M + V NEA++TSVAR+A + +DGD AF ++K+M + PRL
Sbjct: 192 KEYALQRGFEVYENMRMSKVEMNEAALTSVARMAMALSDGDKAFEMVKQMK-ILGINPRL 250
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
R+Y PAL +C N E +KA++VE+HM G+ E+ E+ ALL+VS G+ ++VY L K
Sbjct: 251 RSYGPALSTYCNNGEIDKAFDVEKHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHK 310
Query: 198 LRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKW 254
LRS+VR V+ T +I DWF + KV D GL+ A+ NGGGWHG GW+G+GKW
Sbjct: 311 LRSSVRKVSTTTADLIVDWFKSKIALKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKW 370
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314
V + SV + G C CG QLA +D+D ETE FA+SVA++A+ E +NF FQ WL+
Sbjct: 371 QVLQTSVRKDGMCKCCGVQLATIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYY 430
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRSLWE 373
+EA++D AN+GLY Q G F +++AVV +L ++ K+PL++LH++R++
Sbjct: 431 GPFEAVIDAANVGLYSQ----GKFMPSKINAVVNELRQKLPSKKFPLIVLHHRRIKGDKR 486
Query: 374 N-PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+ P ++ LV+ WN VLY TP GSNDDWYWLYAA+K +CLLV+NDEMRDH+F+LLG++F
Sbjct: 487 DVPINKALVDRWNNANVLYATPTGSNDDWYWLYAAIKFKCLLVSNDEMRDHLFQLLGNDF 546
Query: 433 FLKWKERHQT 442
F KWKERHQ
Sbjct: 547 FPKWKERHQV 556
>gi|357520951|ref|XP_003630764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524786|gb|AET05240.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/370 (48%), Positives = 253/370 (68%), Gaps = 10/370 (2%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ AL+ GF V++ M + V NEA++TSVAR+A + +DGD AF ++K+M + PRL
Sbjct: 226 KEYALQRGFEVYENMRMSKVEMNEAALTSVARMAMALSDGDKAFEMVKQMK-ILGINPRL 284
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
R+Y PAL +C N E +KA++VE+HM G+ E+ E+ ALL+VS G+ ++VY L K
Sbjct: 285 RSYGPALSTYCNNGEIDKAFDVEKHMLEHGVYPEEPELEALLRVSIRGGKSDRVYYVLHK 344
Query: 198 LRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKW 254
LRS+VR V+ T +I DWF + KV D GL+ A+ NGGGWHG GW+G+GKW
Sbjct: 345 LRSSVRKVSTTTADLIVDWFKSKIALKVGKRKWDNGLIMKAMQNNGGGWHGTGWLGKGKW 404
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314
V + SV + G C CG QLA +D+D ETE FA+SVA++A+ E +NF FQ WL+
Sbjct: 405 QVLQTSVRKDGMCKCCGVQLATIDLDPVETENFAKSVASIAISNEKNSNFQTFQKWLDYY 464
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRSLWE 373
+EA++D AN+GLY Q G F +++AVV +L ++ K+PL++LH++R++
Sbjct: 465 GPFEAVIDAANVGLYSQ----GKFMPSKINAVVNELRQKLPSKKFPLIVLHHRRIKGDKR 520
Query: 374 N-PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+ P ++ LV+ WN VLY TP GSNDDWYWLYAA+K +CLLV+NDEMRDH+F+LLG++F
Sbjct: 521 DVPINKALVDRWNNANVLYATPTGSNDDWYWLYAAIKFKCLLVSNDEMRDHLFQLLGNDF 580
Query: 433 FLKWKERHQT 442
F KWKERHQ
Sbjct: 581 FPKWKERHQV 590
>gi|4581132|gb|AAD24622.1| hypothetical protein [Arabidopsis thaliana]
Length = 369
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/350 (56%), Positives = 251/350 (71%), Gaps = 31/350 (8%)
Query: 8 NPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLY 66
+ S+PNKK+K + NPETN L NL SC+KSKDL+ A++LY++A S +RLS HF LLY
Sbjct: 15 SSSRPNKKKKVSRNPETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLY 74
Query: 67 LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKR 126
LCS S TD S + A+ GF +FD+M+S+ + PNEASVTSVARLAA+K +GDYAF ++K
Sbjct: 75 LCSASITDISLQYLAIDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKE 134
Query: 127 MNNEFNV-VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
+ V +PRLRTY PAL CFCE LEAEK YEVEEHM G++LE+ EI+ALL
Sbjct: 135 FVSVGGVSIPRLRTYAPALLCFCEKLEAEKGYEVEEHMEAAGIALEEAEISALL------ 188
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNG 240
KLR V CV+EET KIIE+WF G+K NG+ D+G+++ AVL NG
Sbjct: 189 -----------KLREYVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNG 237
Query: 241 GGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREV 300
GGWHG GW+G+GKW VK+G+V +G+C SC +QLACVD ++ ET++F S+ ALAM+R+
Sbjct: 238 GGWHGHGWVGEGKWTVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKT 297
Query: 301 KAN-------FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
K N FSEFQDWLEK+ +YEAIVDGANIGLYQQNF +G FS+ Q+
Sbjct: 298 KMNSCETNVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQV 347
>gi|255570201|ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
gi|223534642|gb|EEF36338.1| multidrug resistance pump, putative [Ricinus communis]
Length = 589
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/435 (45%), Positives = 283/435 (65%), Gaps = 18/435 (4%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT------- 73
+PE + +C+K +L A+ LY+ A ++L+ HH+N LLYLCS ++
Sbjct: 103 SPEGVLRSKIDNCSKHGNLVEALRLYDEARINGVQLNQHHYNVLLYLCSSGSSVELGGNG 162
Query: 74 -DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
+ + + + GF +F QM+ + V PNEA+ T+ ARLA + D + AF LIK+M F+
Sbjct: 163 ANEKASNMQFKRGFEIFQQMVIDKVPPNEATFTNAARLAIAMEDPEMAFDLIKQMKC-FD 221
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
++P+LR+Y PALF FC+ A++AY V+ HM G+ E+ E++ALLK+S + R +KVY
Sbjct: 222 ILPKLRSYGPALFGFCKKGMADRAYAVDAHMAESGVMPEEPELSALLKLSVDIKRADKVY 281
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHGLGWI 249
+ L +LR+TVR V E T IIE WF + K+ D+ V+ V++ GGGWHG GW+
Sbjct: 282 EMLHRLRATVRQVTETTIDIIEAWFKSEDASKIGEEKWDVSKVREGVVRGGGGWHGQGWL 341
Query: 250 GQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQD 309
G G+W V R +D C SC ++L C+DID +ETE FA S+ LA +REVKA+F FQ+
Sbjct: 342 GSGQWRVVRTQIDAKAVCNSCSEKLVCIDIDPSETENFATSLTNLACQREVKADFVRFQE 401
Query: 310 WLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKRL 368
WL+K+ ++A++DGAN+GL Q FS QL+ VV KL + S +K PL+ILH R+
Sbjct: 402 WLQKHGPFDAVIDGANLGLINQT----NFSFRQLNTVVSKLRQMSPSKRLPLIILHRSRV 457
Query: 369 R-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
+NP++ L+E W + G LY TP GSNDDWYWLYAAV CLLVTNDEMRDH+F+L
Sbjct: 458 TGGPAQNPNNMKLLEFWKKSGALYATPTGSNDDWYWLYAAVSCNCLLVTNDEMRDHLFQL 517
Query: 428 LGSNFFLKWKERHQT 442
LG++FF +WKE+HQ
Sbjct: 518 LGTSFFPRWKEKHQV 532
>gi|357166890|ref|XP_003580902.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Brachypodium distachyon]
Length = 567
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 282/431 (65%), Gaps = 15/431 (3%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYES----AHSQNLRLSLHHFNALLYLCSDSATDPS 76
+PE L C++ DL TA++LY++ A S + LS+HH+N LLYLCS++A S
Sbjct: 87 SPEGLLKHKLDMCSRDGDLPTALALYDAALDPASSPPVPLSIHHYNCLLYLCSNAAATAS 146
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
D+A R GF +F +M + V PNEA++TSVARLAA++ D AF +++RM + + PR
Sbjct: 147 DPDAASR-GFEIFARMEAQGVEPNEATLTSVARLAAARRDPAMAFSVVRRMADA-GIPPR 204
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
LRTY PALF +C+ +A+ A EVE HM G+ E+ E+AALL+V+A+ GR ++VY+ L
Sbjct: 205 LRTYGPALFAYCDAGDADGASEVEAHMDAGGVLPEETELAALLRVNADKGRADEVYRVLH 264
Query: 197 KLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQGK 253
+ R R V E T ++IE WF + D VK V+K GGGWHG GW+G+G+
Sbjct: 265 RTRVLARQVCETTAQVIEAWFRSDAASQAGVDKWDAKKVKEGVVKGGGGWHGQGWLGKGQ 324
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEK 313
W V+R +D++GKC CG++L C+DID +ETE FA+S+ LA +REV+ +F FQ WL +
Sbjct: 325 WDVERSEMDKNGKCQRCGEKLVCIDIDPSETENFAKSLTELACKREVRDDFLRFQGWLRR 384
Query: 314 NANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILHNKRLR-SL 371
+ ++A++D ANIGLY FS Q+++VV + + K PL+ILH R+
Sbjct: 385 HGPFDAVIDAANIGLYNSK----AFSFSQVNSVVNGIQRVTKSKKLPLIILHRSRVHCGP 440
Query: 372 WENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSN 431
P ++ L+E W G LY TP GSNDDWYWLYAAV R LLVTNDEMRDH+F+LLG++
Sbjct: 441 AIVPHNQKLIEGWRSAGALYSTPPGSNDDWYWLYAAVSCRSLLVTNDEMRDHLFQLLGTS 500
Query: 432 FFLKWKERHQT 442
FF +WKE+HQ
Sbjct: 501 FFPRWKEKHQV 511
>gi|242074900|ref|XP_002447386.1| hypothetical protein SORBIDRAFT_06g034140 [Sorghum bicolor]
gi|241938569|gb|EES11714.1| hypothetical protein SORBIDRAFT_06g034140 [Sorghum bicolor]
Length = 528
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 195/431 (45%), Positives = 281/431 (65%), Gaps = 15/431 (3%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHSQN--LRLSLHHFNALLYLCSDSA---TDP 75
+PE L C+++ DLTTA+ LY+ A S + + LSLHH+N LLYLCS++A TD
Sbjct: 73 SPEGLLRHQLDMCSRNADLTTALRLYDDALSPDTPVPLSLHHYNCLLYLCSNAAATDTDT 132
Query: 76 SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135
S +A + GF +F +M ++ V PNEA++TSVARLAA+ D AF +++RM P
Sbjct: 133 DSSTAAAQRGFDIFARMEADGVQPNEATLTSVARLAAATRDPAMAFSVVRRMAAA-GTPP 191
Query: 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
RLR+Y PALF +C+ +A+ A +VE HM G+ E+ E+AALL+V+A+ G+ ++VY+ L
Sbjct: 192 RLRSYGPALFAYCDAKDADGAKQVEAHMDASGVVPEEPELAALLRVNADKGKADEVYRLL 251
Query: 196 QKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQG 252
+ R+ VR V + T +++E WF + D VK V+K GGGWHG GW+G+G
Sbjct: 252 HRTRALVRQVCDTTAQVVEAWFRSDAASQAGVDKWDPSKVKEGVVKGGGGWHGQGWLGKG 311
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE 312
W V +D+ G C CG++L C+DID +ET+ FA S+ LA++REVK +F FQ+WL
Sbjct: 312 AWSVGWTEMDKDGTCQRCGEKLVCIDIDPSETDNFANSLTELAIKREVKEDFLGFQNWLR 371
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILHNKRLR-S 370
++ ++A++D AN+GLY FS Q+++VV + + K PL+ILH R+
Sbjct: 372 RHGPFDAVIDAANVGLYNSK----AFSFSQVNSVVNAIQRVTKSKKLPLIILHRNRVNGG 427
Query: 371 LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGS 430
+ P ++ ++E W G LY TP GSNDDWYWLYAAV R LLVTNDEMRDH+F+LLG+
Sbjct: 428 PAKAPYNQKILESWRNAGALYATPPGSNDDWYWLYAAVSCRSLLVTNDEMRDHLFQLLGT 487
Query: 431 NFFLKWKERHQ 441
+FF +WKE+HQ
Sbjct: 488 SFFPRWKEKHQ 498
>gi|167998708|ref|XP_001752060.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697158|gb|EDQ83495.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 285/442 (64%), Gaps = 16/442 (3%)
Query: 15 KRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQN-LRLSLHHFNALLYLCSDSAT 73
K+K +P E+ ++ C+K D AI +Y+ ++ + + + +N LLYLCS AT
Sbjct: 21 KKKRDPA-ESELRRSIDMCSKHADAMGAIEIYDKVVAEGKMSFNQYSYNVLLYLCSSGAT 79
Query: 74 ---DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE 130
K L+ GF V++ M V PNEA+ T+VARLA +K+DGD AF ++K+M
Sbjct: 80 VVLTDEQKQLCLQRGFAVYEAMKLQGVPPNEATFTAVARLAVAKDDGDLAFDMVKQMAKA 139
Query: 131 FNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
+ PRLR+Y PAL +C+ EKA+EV+EHM G+ E+ E+ ALLK++A+ G +K
Sbjct: 140 -KLSPRLRSYSPALHTYCKLKNIEKAFEVDEHMLAAGVQPEESELEALLKLTADAGLEDK 198
Query: 191 VYQYLQKLRSTVRCVNEETGKIIEDWF-SGQKVNGVSCDLG------LVKNAVLKNGGGW 243
VY L ++R+TVR ++ T +++ WF S N + VK A GGGW
Sbjct: 199 VYPLLHRIRTTVRGLSPSTAGVVQQWFESSAGANAGKSNWNSLPSQETVKAAYESRGGGW 258
Query: 244 HGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN 303
HGLGW+G+G W VK +D +G C CG+QL +DID ET FA+S++ LA +RE K+N
Sbjct: 259 HGLGWLGRGSWEVKPSELDANGVCQECGEQLVTIDIDPKETVMFAKSLSELACQREGKSN 318
Query: 304 -FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKW-PLV 361
F +FQ WL+++ ++ IVDGAN+GL+ QNF EGGF+ QL++VVK + E+ G+K PL+
Sbjct: 319 EFKKFQGWLDRHGPFDVIVDGANVGLFNQNFGEGGFNFHQLNSVVKGIKEKVGSKREPLI 378
Query: 362 ILHNKRLRSLWENPSHR-NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEM 420
+LH++R R + S ++ +W E +Y TP GSNDDWYWL+AAVK +C+LVTNDEM
Sbjct: 379 LLHHRRTRGGPASSSFAIKILNKWQETHAIYTTPTGSNDDWYWLFAAVKYKCILVTNDEM 438
Query: 421 RDHIFELLGSNFFLKWKERHQT 442
RDH+F+LLG++FF +WKERHQ
Sbjct: 439 RDHLFQLLGNDFFPRWKERHQV 460
>gi|168007180|ref|XP_001756286.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692325|gb|EDQ78682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 526
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 283/445 (63%), Gaps = 18/445 (4%)
Query: 13 NKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQ-NLRLSLHHFNALLYLCSDS 71
+KK+K + E I++ C+K D+ AI +Y+ ++ + + + +N LLYLCS +
Sbjct: 20 HKKKKDSAESELRRSIDM--CSKFADVMGAIEIYDKVVAEGKVAFNQYTYNVLLYLCSSA 77
Query: 72 ATDPSSKDS----ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRM 127
AT+ D L GF +++ M V PNEA+ T+VARLA +K DGD AF ++K+M
Sbjct: 78 ATEVVVTDEERRLCLERGFVIYEAMKLQEVPPNEATFTAVARLAVAKEDGDLAFDMVKQM 137
Query: 128 NNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187
N + PRLR+Y PAL +C+ EKA+EVEEHM G+ E+ E+ ALL+++ + G
Sbjct: 138 ANA-KLSPRLRSYSPALHIYCKLKNFEKAFEVEEHMLAAGVQAEESELEALLQLATDFGL 196
Query: 188 VEKVYQYLQKLRSTVRCVNEETGKIIEDWF------SGQKVNGVSC-DLGLVKNAVLKNG 240
KVY L ++R+TVR ++ +++ WF S K N S VK A G
Sbjct: 197 EYKVYSLLHRIRTTVRGLSPSCAGVVQQWFESSPAASAGKSNWDSLPSPKTVKAAYESRG 256
Query: 241 GGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREV 300
GGWHGLGW+G+G W VK +D G C CG QL +DID ETE FA+S++ LA +RE
Sbjct: 257 GGWHGLGWLGRGNWEVKSSVLDTGGVCQECGQQLVTIDIDPNETEMFAKSLSELACQREG 316
Query: 301 KAN-FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKW- 358
K N F +FQ WL ++ ++AIVDGAN+GL+ QNF +GGF+ QL++VVK + E+ G+K
Sbjct: 317 KNNEFKKFQAWLNRHGPFDAIVDGANVGLFNQNFVDGGFNFHQLNSVVKGIKEKIGSKRN 376
Query: 359 PLVILHNKRLRSLWENPSHR-NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTN 417
PL++LH++R R N H +++ W E ++ TP GSNDDWYWLYAAV+ +C+LVTN
Sbjct: 377 PLILLHHRRTRGGPANSPHAIKMLKRWQEAHAIFTTPTGSNDDWYWLYAAVQYKCVLVTN 436
Query: 418 DEMRDHIFELLGSNFFLKWKERHQT 442
DEMRDH+F LLG++FF KWKERHQ
Sbjct: 437 DEMRDHLFHLLGNDFFPKWKERHQV 461
>gi|226497374|ref|NP_001147555.1| antiporter/ drug transporter/ transporter [Zea mays]
gi|195612160|gb|ACG27910.1| antiporter/ drug transporter/ transporter [Zea mays]
gi|219884449|gb|ACL52599.1| unknown [Zea mays]
Length = 553
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/441 (44%), Positives = 285/441 (64%), Gaps = 15/441 (3%)
Query: 11 KPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQN--LRLSLHHFNALLYLC 68
K ++R+ +P+ L C+++ DLTTA+ LY+ A S + + LSLHH+N LLYLC
Sbjct: 63 KAVRRRRARESPQGLLRHQLDMCSRNADLTTALRLYDDALSPDNPIPLSLHHYNCLLYLC 122
Query: 69 SD-SATDPSSKDSAL--RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIK 125
S+ +ATD S SA + GF +F +M ++ V PNEA++TSVARLAA+ D AF +++
Sbjct: 123 SNAAATDSDSHISATAAQRGFDIFARMEADGVQPNEATLTSVARLAAATRDPAMAFSVVR 182
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
RM PRLRTY PALF +C+ +A+ A +VE HM G+ E+ E+AALL+V+A+T
Sbjct: 183 RMAAA-GTPPRLRTYGPALFAYCDAKDADGAKQVEAHMDASGVVPEEPELAALLRVNADT 241
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVN--GV-SCDLGLVKNAVLKNGGG 242
G+ ++VY+ L + R VR V + T +++E WF + GV S D VK V+K GGG
Sbjct: 242 GKADEVYRLLHRTRVLVRQVCDTTAQVVEAWFRSDAASQAGVDSWDPTKVKEGVVKGGGG 301
Query: 243 WHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKA 302
WHG GW+G+G W V + + G C CG++L C+DID AET+ FA S+ LA++ E +
Sbjct: 302 WHGQGWLGKGAWSVGWTEMGKDGTCQRCGERLVCIDIDPAETDNFANSLTELAIKLEARE 361
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLV 361
+F FQ WL ++ ++A++D AN+GLY+ F Q+++VV + + K PL+
Sbjct: 362 DFLSFQSWLRRHGPFDAVIDAANVGLYKSK----DFCFSQVNSVVNAIQRVTKSKKLPLI 417
Query: 362 ILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEM 420
+LH R+ + P ++ +++ W G LY TP GSNDDWYWLYAAV R LLVTNDEM
Sbjct: 418 VLHRSRVNVGPAKAPYNQKILDSWRNAGALYATPPGSNDDWYWLYAAVSCRSLLVTNDEM 477
Query: 421 RDHIFELLGSNFFLKWKERHQ 441
RDH+F+LLG++FF +WKE+HQ
Sbjct: 478 RDHLFQLLGTSFFPRWKEKHQ 498
>gi|224119796|ref|XP_002331163.1| predicted protein [Populus trichocarpa]
gi|222873246|gb|EEF10377.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 188/425 (44%), Positives = 271/425 (63%), Gaps = 13/425 (3%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
E + L C+K D+ AI LY+ A + +++ +H+ LLYLCS +A K AL
Sbjct: 12 ELKLRVRLDMCSKRGDVIAAIQLYDLAQREGIKMGQYHYAVLLYLCSSAAFSEDVKKYAL 71
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
+ G +F++M V NEA++T+VAR+A S +GD AF ++K+M+ + P+LR+Y P
Sbjct: 72 QRGCEIFEKMCKEKVPINEATLTAVARMAMSIGNGDLAFEMVKQMD-ALGINPKLRSYGP 130
Query: 143 ALFCFC--ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL FC ++ +KA+ VE+HM G+ E+ E+ ALL+VS E G+ +KVY L KLR
Sbjct: 131 ALSVFCSSGDI--DKAFYVEKHMLEHGVYPEEPELKALLRVSVEGGKGDKVYYLLHKLRR 188
Query: 201 TVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGS 260
VR V+ T II WF+ + + V VK A+ GGGWHG GW+G+GKW V S
Sbjct: 189 IVRRVSPSTAGIIVRWFNSKAASRVGKTKWDVKEAIENGGGGWHGQGWLGKGKWTVSCTS 248
Query: 261 VDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAI 320
V G C CG +L +D+D ETE+FA+SVA++A++R+ ++F FQ WL+ +EA+
Sbjct: 249 VGLDGICKYCGQKLTTIDLDAVETEKFAESVASIAIKRDRDSSFQRFQKWLDYYGPFEAV 308
Query: 321 VDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRL--RSLWENPSH 377
+DGAN G+Y Q G F +++AVV + ++ KWPL++LHNKR+ R + + P +
Sbjct: 309 IDGANAGIYNQ----GRFMPSKINAVVNGIRQKLPSKKWPLIVLHNKRITGRKM-DGPVN 363
Query: 378 RNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWK 437
+ +E+W LY TP GSNDDWYWLYAA+K +CL+VTNDEMRDH F LLG++FF +WK
Sbjct: 364 KAFIEKWKNADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHTFHLLGNDFFPRWK 423
Query: 438 ERHQT 442
ERHQ
Sbjct: 424 ERHQV 428
>gi|218195893|gb|EEC78320.1| hypothetical protein OsI_18054 [Oryza sativa Indica Group]
Length = 557
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 195/453 (43%), Positives = 285/453 (62%), Gaps = 19/453 (4%)
Query: 2 SNTTSTNPSKPNKKRKTNP-----NPETNFLINLQSCTKSKDLTTAISLYESAHSQN--L 54
+ TT+ + KPN+ +PE L C++ DL TA++LYE+A S + +
Sbjct: 47 TTTTAESHPKPNESNAARRRRARDSPEGLLKAKLDMCSRDNDLPTALALYEAAISPDSLI 106
Query: 55 RLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASK 114
LSL H+N LLYLC+++A SS A + GF +F +M ++ V PNEA++T +ARLAA++
Sbjct: 107 PLSLGHYNCLLYLCANAAAADSSSPDAAQRGFDIFSRMEADGVQPNEATLTILARLAAAR 166
Query: 115 NDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE 174
D AF +++RM P LR+Y PALF +C+ +A+ A EVE HM G+ E+ E
Sbjct: 167 RDPAMAFSIVRRMATA-GTAPHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEAE 225
Query: 175 IAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCD---LGL 231
+AALL+V++ GR ++VY+ L + R +R V + T +++E WF+ + D
Sbjct: 226 LAALLRVNSARGRPDQVYRLLHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDATK 285
Query: 232 VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSV 291
VK + GGGWHG GW+G+G+W V R +D+ G C CG++L C+DID +ET FA+SV
Sbjct: 286 VKQGLRNGGGGWHGQGWLGKGQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAESV 345
Query: 292 AALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLY 351
A +A+ R+ ANF +FQ WLE + ++A++D AN+GLY +N FS +++ VV +
Sbjct: 346 AQIAINRD--ANFVKFQKWLECHGPFDAVIDAANVGLYNRN----SFSFYEVNRVVNGIQ 399
Query: 352 ERS-GNKWPLVILHNKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK 409
+ K PL+ILH R+ + P ++ L+E W G LY TP GSNDDWYWLYAAV
Sbjct: 400 RITKSKKLPLIILHKNRVNGGPAKLPQNQKLLESWQRAGALYATPPGSNDDWYWLYAAVI 459
Query: 410 LRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
R LLVTNDEMRDH+F+LLG++FF +WKE+HQ
Sbjct: 460 YRSLLVTNDEMRDHLFQLLGTSFFPRWKEKHQV 492
>gi|413936385|gb|AFW70936.1| hypothetical protein ZEAMMB73_755879 [Zea mays]
Length = 684
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 240/375 (64%), Gaps = 20/375 (5%)
Query: 79 DSALRHGFRVFDQMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
D A GF +FD+M S V +EA++T+ AR+A S D D AF ++K+M + P+
Sbjct: 263 DYARARGFEIFDKMCSEKERVQMSEAALTAKARMALSMGDSDMAFEIVKQMKG-LGLKPK 321
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
LR+Y PAL FC + EKA+EVE HM G++ E+ E+ LL+ S R +KVY L
Sbjct: 322 LRSYGPALTAFCNSGNVEKAFEVEAHMLESGITPEEAELETLLRASVVGRRGDKVYYLLH 381
Query: 197 KLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK 253
K R+ VR V+ T ++ E WF + KV D G + A+ NGGGWHG GW+G+GK
Sbjct: 382 KFRTAVRQVSHSTAELFEAWFRSPTASKVGKRKWDAGAIAKAIENNGGGWHGFGWLGRGK 441
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEK 313
W V +++E+G C +CG++LA +D+D ETE FA VA LA++RE K+NF FQ WLEK
Sbjct: 442 WTVAHSNINENGVCLACGEKLAIIDLDPKETEDFATFVAKLAIKRERKSNFENFQKWLEK 501
Query: 314 NANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNK-----R 367
+ +EA+VD AN+GL F+ S+ ++++V + R + KWPL++LHNK R
Sbjct: 502 HGPFEAVVDAANVGL----FSHKHLSLSKVNSVADAIRLRFTSKKWPLIVLHNKHLIGER 557
Query: 368 LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
++ L + LV++W ++ +Y TP GSNDDWYWLYAA++ +CL++TNDEMRDH F++
Sbjct: 558 MKKL----NDHKLVQKWKQENSIYATPTGSNDDWYWLYAAIRCKCLIITNDEMRDHTFQI 613
Query: 428 LGSNFFLKWKERHQT 442
L NFF KWKERHQ
Sbjct: 614 LERNFFPKWKERHQV 628
>gi|356511361|ref|XP_003524395.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32230, mitochondrial-like [Glycine max]
Length = 540
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/459 (41%), Positives = 264/459 (57%), Gaps = 54/459 (11%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
KK+K +PE L C+K D+ A+SLY+SA S+ ++L HH+ LL+LCS +A
Sbjct: 16 KKKKDKDSPEVKLKNGLDMCSKRGDVMGALSLYDSAISEGVKLGQHHYTLLLFLCSSAAV 75
Query: 74 D---PSSKDS----------------------ALRHGFRVFDQMLSNNVIPNEASVTSVA 108
P+ S AL+ GF+V++ M + V NEA+
Sbjct: 76 GVVRPAKSGSGARTLNALVSSNELVSEDVKRYALQRGFQVYENMRVDKVQMNEAAX---- 131
Query: 109 RLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168
GD AF ++K+M LR+Y PAL FC N E +KA+ VE+HM G+
Sbjct: 132 --------GDMAFEMVKQMX--------LRSYGPALSTFCNNGEIDKAFAVEKHMLXHGV 175
Query: 169 SLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC- 227
E+ E+ AL +VS G +K+Y L KLR VR V+ TG +I D F ++ + V
Sbjct: 176 YPEEPELEALSRVSVGAGNSDKIYYVLHKLRIIVRKVSPTTGSLIFDLFKNKQASRVGKR 235
Query: 228 --DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETE 285
D L+ A NGGG HG GW+G+GKW V ++ G C CG QL +D+D ET+
Sbjct: 236 KWDKRLIMEATENNGGGRHGQGWLGKGKWEVVHTTIGNDGLCKCCGVQLTTIDLDPVETQ 295
Query: 286 RFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDA 345
FA VA+LA+ RE +NF +FQ L +EA+VD AN+GL+ Q G F +++A
Sbjct: 296 NFANLVASLAVMREKGSNFQKFQKSLXYYGPFEAVVDAANVGLFGQ----GRFMPQKINA 351
Query: 346 VVKKLYER-SGNKWPLVILHNKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYW 403
V ++ + K+PL+ILHNKR + + P +R+L+++WN LY TP GSND+WYW
Sbjct: 352 VANEICQTLPSKKFPLIILHNKRSKGDKMDEPINRSLIDKWNNADALYATPSGSNDNWYW 411
Query: 404 LYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
LYAA+K RCLLVTNDEMRDH+F+LLG++FF KWKERHQ
Sbjct: 412 LYAAIKFRCLLVTNDEMRDHLFQLLGNDFFPKWKERHQV 450
>gi|222629843|gb|EEE61975.1| hypothetical protein OsJ_16752 [Oryza sativa Japonica Group]
Length = 783
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/420 (44%), Positives = 272/420 (64%), Gaps = 14/420 (3%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQN--LRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR 87
L C++ DL TA++LYE+A S + + LSL H+N LLYLC+++A SS A + GF
Sbjct: 306 LDMCSRDNDLPTALALYEAAISPDSLIPLSLGHYNCLLYLCANAAAADSSSPDAAQRGFD 365
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+F +M ++ V PNEA++T +ARLAA++ D AF +++RM P LR+Y PALF +
Sbjct: 366 IFSRMEADGVQPNEATLTILARLAAARRDPAMAFSIVRRMATA-GTAPHLRSYGPALFAY 424
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207
C+ +A+ A EVE HM G+ E+ E+AALL+V++ GR ++VY+ L + R +R V +
Sbjct: 425 CDAGDADGATEVEAHMDASGVVPEEAELAALLRVNSARGRPDQVYRLLHRARVLLRQVAD 484
Query: 208 ETGKIIEDWFSGQKVNGVSCD---LGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDES 264
T +++E WF+ + D VK + GGGWHG GW+G+G+W V R +D+
Sbjct: 485 ATAQLLESWFASHAASEAGLDHWDATKVKQGLRNGGGGWHGQGWLGKGQWTVARTDMDKD 544
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGA 324
G C CG++L C+DID +ET FA+SVA +A+ R+ ANF +FQ WLE + ++A++D A
Sbjct: 545 GTCHRCGEKLVCIDIDPSETHSFAESVAQIAINRD--ANFVKFQKWLECHGPFDAVIDAA 602
Query: 325 NIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILHNKRLRS-LWENPSHRNLVE 382
N+GLY +N FS +++ VV + + K PL+ILH R+ + P ++ L+E
Sbjct: 603 NVGLYNRN----SFSFYEVNRVVNGIQRITKSKKLPLIILHKNRVNGGPAKLPQNQKLLE 658
Query: 383 EWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
W G LY TP GSNDDWYWLYAAV R LLVTNDEMRDH+F+LLG++FF +WKE HQ
Sbjct: 659 SWQRAGALYATPPGSNDDWYWLYAAVIYRSLLVTNDEMRDHLFQLLGTSFFPRWKENHQV 718
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 120/192 (62%), Gaps = 6/192 (3%)
Query: 120 AFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
AF +++RM P LR+Y PALF +C+ +A+ A EVE HM G+ E+ E+AALL
Sbjct: 2 AFSIVRRMATA-GTAPHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEAELAALL 60
Query: 180 KVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAV 236
+V++ GR ++VY+ L + R +R V + T +++E WF+ + D VK +
Sbjct: 61 RVNSARGRPDQVYRLLHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDATKVKQGL 120
Query: 237 LKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM 296
GGGWHG GW+G+G+W V R +D+ G C CG++L C+DID +ET FA+SVA +A+
Sbjct: 121 RNGGGGWHGQGWLGKGQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAESVAQIAI 180
Query: 297 EREVKANFSEFQ 308
R+ ANF +FQ
Sbjct: 181 NRD--ANFVKFQ 190
>gi|147769934|emb|CAN70051.1| hypothetical protein VITISV_034435 [Vitis vinifera]
Length = 753
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/292 (58%), Positives = 211/292 (72%), Gaps = 18/292 (6%)
Query: 48 SAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSV 107
SA SQN RL +H NALLYLC+ S +PSSK AL +GFR+FD ++++ V PNEA++T+V
Sbjct: 474 SAVSQNFRLIYYHCNALLYLCTISVDEPSSKALALDYGFRIFDHVVNSGVTPNEATITAV 533
Query: 108 ARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMG 167
A LA +K+DGD AF +++ M N + + PRLRTY PALF FC NLE EKA+
Sbjct: 534 ASLATAKSDGDLAFEVVRTMVN-YELSPRLRTYGPALFWFCTNLEGEKAW---------- 582
Query: 168 LSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNG 224
+ +KVSAE GR +KVY YL KLR+ VR V+E T +IIE WF G+ +V G
Sbjct: 583 ----RSRSWPAVKVSAEMGRGDKVYAYLHKLRTAVRSVSESTAEIIEGWFCGEATSEVGG 638
Query: 225 VSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAET 284
C LG ++ LKNGGGWHG GWIG+GKWVV R VD SG+C SC +QLA VDID AET
Sbjct: 639 ADCCLGAIEEVALKNGGGWHGQGWIGKGKWVVCRAKVDSSGQCGSCREQLATVDIDRAET 698
Query: 285 ERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEG 336
E F++SVAA+AMEREV++NF EFQDWL+K+A+YEAIVDGANIGLYQQNF G
Sbjct: 699 ETFSESVAAMAMEREVRSNFREFQDWLDKHADYEAIVDGANIGLYQQNFASG 750
>gi|359484351|ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Vitis vinifera]
Length = 816
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 245/370 (66%), Gaps = 10/370 (2%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K ALR GF ++++M V NEA++TSVAR+A S +GD AF ++K+M + PRL
Sbjct: 307 KKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNGDMAFDMVKQMK-PLGINPRL 365
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
R+Y PAL FC N + EKA+ VEEHM G+ E+ E+ ALL+V E G+ +KVY L K
Sbjct: 366 RSYGPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPELEALLRVGIEAGKSDKVYYVLHK 425
Query: 198 LRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQGKW 254
LR++VR V+ T +IE WF D L+ A++ GGGWHG GW+G+GKW
Sbjct: 426 LRTSVRQVSHSTANLIEKWFKSNAAAAAGKGNWDQRLISEAIVNGGGGWHGQGWLGKGKW 485
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314
V +V G C CG++LA +D+D ETE+FA+SVA++A++RE ++F +FQ WL+
Sbjct: 486 NVSHTNVGADGLCLCCGEKLATIDLDPTETEKFAESVASIAIKREKNSSFQKFQKWLDYY 545
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRSL-W 372
YEA+VD AN+GL+ Q F +++A+V + + KWPL+ILHNKR+
Sbjct: 546 GPYEAVVDAANVGLFSQRR----FIPSKVNAIVNGIRQMLPSKKWPLIILHNKRITGKKM 601
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+ P++R L+E+W LY TP GSNDDWYWLYAA+K +CL+VTNDEMRDHIF+LLG++F
Sbjct: 602 DEPANRALIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHIFQLLGNDF 661
Query: 433 FLKWKERHQT 442
F KWKERHQ
Sbjct: 662 FPKWKERHQV 671
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 11 KPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSD 70
K +KK K + + E + L+ C+K+ D+ A+ LY+SA + + L +H+ LLYLCS
Sbjct: 105 KGSKKNKVD-SQEGLLRVGLEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCSS 163
Query: 71 SA 72
+A
Sbjct: 164 AA 165
>gi|297738805|emb|CBI28050.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 245/370 (66%), Gaps = 10/370 (2%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K ALR GF ++++M V NEA++TSVAR+A S +GD AF ++K+M + PRL
Sbjct: 242 KKYALRRGFEIYEKMCLEKVPMNEATLTSVARMAMSMGNGDMAFDMVKQMK-PLGINPRL 300
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
R+Y PAL FC N + EKA+ VEEHM G+ E+ E+ ALL+V E G+ +KVY L K
Sbjct: 301 RSYGPALSAFCNNGDIEKAFGVEEHMLEHGVYPEEPELEALLRVGIEAGKSDKVYYVLHK 360
Query: 198 LRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLKNGGGWHGLGWIGQGKW 254
LR++VR V+ T +IE WF D L+ A++ GGGWHG GW+G+GKW
Sbjct: 361 LRTSVRQVSHSTANLIEKWFKSNAAAAAGKGNWDQRLISEAIVNGGGGWHGQGWLGKGKW 420
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314
V +V G C CG++LA +D+D ETE+FA+SVA++A++RE ++F +FQ WL+
Sbjct: 421 NVSHTNVGADGLCLCCGEKLATIDLDPTETEKFAESVASIAIKREKNSSFQKFQKWLDYY 480
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRSL-W 372
YEA+VD AN+GL+ Q F +++A+V + + KWPL+ILHNKR+
Sbjct: 481 GPYEAVVDAANVGLFSQRR----FIPSKVNAIVNGIRQMLPSKKWPLIILHNKRITGKKM 536
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+ P++R L+E+W LY TP GSNDDWYWLYAA+K +CL+VTNDEMRDHIF+LLG++F
Sbjct: 537 DEPANRALIEKWKNADALYTTPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHIFQLLGNDF 596
Query: 433 FLKWKERHQT 442
F KWKERHQ
Sbjct: 597 FPKWKERHQV 606
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 11 KPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSD 70
K +KK K + + E + L+ C+K+ D+ A+ LY+SA + + L +H+ LLYLCS
Sbjct: 105 KGSKKNKVD-SQEGLLRVGLEMCSKNGDVMGALELYDSALREGIELGQYHYTVLLYLCSS 163
Query: 71 SA 72
+A
Sbjct: 164 AA 165
>gi|168063907|ref|XP_001783909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664592|gb|EDQ51306.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 522
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/439 (45%), Positives = 281/439 (64%), Gaps = 19/439 (4%)
Query: 22 PETNFLINLQSCTKSKDLTTAISLYE-SAHSQNLRLSLHHFNALLYLCSDSATD---PSS 77
PE + L C+K D+ A+ +Y+ + + + +++N +LYLCS +ATD P
Sbjct: 31 PEQDLRRALDMCSKHADVKQALEIYDKTCKEGKIAFNQYNYNIILYLCSSAATDSLKPQK 90
Query: 78 KDSAL--RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135
K L + GF V++ M S V PNEA+ T+VARLA +K DGD AF ++K+M E N+ P
Sbjct: 91 KQRILYMKRGFEVYEAMKSQGVPPNEATFTAVARLAVAKEDGDLAFDMVKQM-AEANLSP 149
Query: 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
RLR+Y PAL+ +C+ +KA+EV++HM G++LE+ E+ ALLKVS G +KVY L
Sbjct: 150 RLRSYAPALYTYCKLKNHKKAFEVDDHMKKSGVALEESELEALLKVSVGAGLEDKVYSLL 209
Query: 196 QKLRSTVRCVNEETGKIIEDWF--SGQKVNGVS-----CDLGLVKNAVLKNGGGWHGLGW 248
+LR+TVR V+ ++I+ WF S G S VK A GGGWHGLGW
Sbjct: 210 HRLRTTVRDVSPSAVEVIQQWFTSSAAATAGKSNWEHLPGPEYVKKATESCGGGWHGLGW 269
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN-FSEF 307
+G+G W VK VD+ G C CG+ LA +D+D ETE FAQS++ +A +RE K N F +F
Sbjct: 270 LGRGTWEVKSSVVDDHGVCQECGEPLATIDLDPQETEMFAQSLSRMACQREAKNNEFKKF 329
Query: 308 QDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSG-NKWPLVILHNK 366
Q WL+++ ++AIVDGAN+GLY N GGF+ QL++VV + +R G + PL++LH++
Sbjct: 330 QGWLDRHGPFDAIVDGANVGLYNSNTPNGGFNFYQLNSVVTGIQKRLGLKREPLILLHHR 389
Query: 367 RLRSLWENPSH-RNLVEEWNEKGVLYMTPHGSNDDW--YWLYAAVKLRCLLVTNDEMRDH 423
R + + S ++ W E +Y TP GSNDDW YWLYAAV+ RC+LVTNDEMRDH
Sbjct: 390 RTKGGPADSSFAARMLSNWKENNSIYTTPTGSNDDWYVYWLYAAVRFRCVLVTNDEMRDH 449
Query: 424 IFELLGSNFFLKWKERHQT 442
+F LLG++FF KWKERHQ
Sbjct: 450 LFSLLGNDFFPKWKERHQV 468
>gi|449465334|ref|XP_004150383.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
gi|449506617|ref|XP_004162799.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 633
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/379 (46%), Positives = 249/379 (65%), Gaps = 10/379 (2%)
Query: 69 SDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
S+ D K AL GF ++++M + N+ NEA++TSVAR+A S DGD AF ++K+M
Sbjct: 191 SNILVDEDFKKYALETGFEIYEKMCAENIPMNEATLTSVARMAMSMGDGDKAFDMVKQMK 250
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
+ PRLR+Y PAL FC+N + EKA+ VE+HM G+ E+ E+AALL+VS
Sbjct: 251 -PLGLNPRLRSYGPALSTFCKNGKLEKAFSVEKHMLEHGVYPEEPELAALLRVSINASNA 309
Query: 189 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGLVKNAVLKNGGGWHG 245
EKVY L KLR++VR V T +I WF + +V V D ++K A+ GGGWHG
Sbjct: 310 EKVYYLLHKLRTSVRQVLPSTADLIITWFKSKDAARVGKVKLDRKIIKKAIGNGGGGWHG 369
Query: 246 LGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFS 305
LGW+G+GKW V +V + G C SCG++LA +D+D ETE FA+SVAA+ +RE ++F
Sbjct: 370 LGWLGRGKWSVSSTNVGKDGLCKSCGEKLATIDLDPIETENFAESVAAIVTQREKNSSFQ 429
Query: 306 EFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILH 364
+FQ WLE +EA++D AN+GL+ Q F+ +++ + + ++ KWPL+ILH
Sbjct: 430 KFQKWLEYYGPFEAVIDAANVGLFSQR----KFAPSKVNLIANGIRQKLPSKKWPLIILH 485
Query: 365 NKRLRSL-WENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDH 423
N+R+ E P ++ L+E+W LY TP GSNDDWYWLYAA+K +CL+VTNDEMRDH
Sbjct: 486 NRRITGRKMEEPVNKTLIEKWKNADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDH 545
Query: 424 IFELLGSNFFLKWKERHQT 442
F+LLG++FF +WKERHQ
Sbjct: 546 TFQLLGNDFFPRWKERHQV 564
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA 72
N ET F NL C+K+ D AI LYE A + + L +H+ +LYLCS +A
Sbjct: 46 NNETPFRANLDMCSKTGDFIGAIKLYEWAQKEGINLEQYHYAVILYLCSSAA 97
>gi|302759989|ref|XP_002963417.1| hypothetical protein SELMODRAFT_80247 [Selaginella moellendorffii]
gi|300168685|gb|EFJ35288.1| hypothetical protein SELMODRAFT_80247 [Selaginella moellendorffii]
Length = 536
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 275/442 (62%), Gaps = 14/442 (3%)
Query: 6 STNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL 65
+++PS +K+K N E F L +C+K D+ A+S Y S++ + ++ L+++N LL
Sbjct: 51 ASSPSP--RKKKFNLVSEVRF--TLDTCSKFGDVNGALSAY-SSNREAVKFDLYNYNVLL 105
Query: 66 YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIK 125
YLCS +A D LR G +F+QM + NV PNEA+ T++ARL+ +K DGD AF ++K
Sbjct: 106 YLCSSAALG-EMMDGFLRKGLEIFEQMQAENVAPNEATFTALARLSVAKRDGDLAFEIVK 164
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
M + P+LR Y PAL+ + + + EKA+EV HM + G+ E+ E+ LL +S++
Sbjct: 165 AMIAA-KIPPKLRCYGPALYVYFKRNDPEKAFEVYNHMLVHGVQPEEAELEVLLHLSSKA 223
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGL-VKNAVLKNGG 241
++VY L LR TVR V++ T +IE WF +V G S V+ + L GG
Sbjct: 224 CLGDRVYLLLHHLRETVRDVSQSTVSVIERWFKSDFAGRVTGNSLPGDFDVRCSSLAKGG 283
Query: 242 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK 301
GWHGLGW+GQG+W V S+ G CC C +Q+ +DI +T+ FA+ +A+LA +RE
Sbjct: 284 GWHGLGWLGQGRWNVGYTSLTAEGVCCRCNEQMVTIDITPEDTDVFAKCIASLAFKRESN 343
Query: 302 ANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLV 361
+F F+DWL++N +E +VDGAN+G Y Q F G + QL+ VV + RSG KWPL+
Sbjct: 344 NSFGIFKDWLDRNGPFETVVDGANVGFYNQRFN-GELNFAQLETVVADVQRRSG-KWPLI 401
Query: 362 ILHNKR-LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEM 420
+LH R ++ + + L+ W+ LY+ P GSNDDWYWLYAAVK + LLV+NDEM
Sbjct: 402 VLHVGRTMKGSGRSSYAQQLLRHWSNAKALYIAPAGSNDDWYWLYAAVKCKSLLVSNDEM 461
Query: 421 RDHIFELLGSNFFLKWKERHQT 442
RDHIF+LLG FF WKERHQ
Sbjct: 462 RDHIFQLLGREFFPTWKERHQV 483
>gi|357139247|ref|XP_003571195.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
mitochondrial-like [Brachypodium distachyon]
Length = 729
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 273/479 (56%), Gaps = 69/479 (14%)
Query: 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT-------------- 73
+ L C+K D+ AI+LY+SA + +R+ HH+N LLYLCS +A
Sbjct: 190 VALDLCSKRGDVIGAINLYDSAVKEGIRMGQHHYNVLLYLCSSAALGIVQPAKSGSAGKL 249
Query: 74 DPSSKDS-------------------------------------------ALRHGFRVFD 90
DP+S +S A GF +F+
Sbjct: 250 DPASVESSGHPEDSNVPEGHVQNQEGNETILFPSVQIGSSIPVSDEIREYARTRGFEIFE 309
Query: 91 QMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
+M S V ++A++T VAR+A S +GD AF ++K+M E + P+LR+Y PAL FC
Sbjct: 310 KMCSEKERVAMSKAALTGVARMATSMGNGDMAFEIVKQM-KELGITPKLRSYGPALTAFC 368
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208
++ EKA+EVE HM G++ E+ E+ LL+ S R ++VY L K R+TVR V+
Sbjct: 369 DSGNVEKAFEVEAHMLESGVTPEEPELEMLLRASVVARRGDRVYYLLHKFRNTVRQVSPS 428
Query: 209 TGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESG 265
T + IE WF + KV D + + +GGGWHGLGW+G+GKW + R +D++G
Sbjct: 429 TAEQIEAWFRSSTASKVGKRKWDACALAKEIENHGGGWHGLGWLGRGKWTITRSHIDKNG 488
Query: 266 KCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGAN 325
C +CG +LA +D+D ETE FA VA LA++RE +NF FQ WL+ + +EA++D AN
Sbjct: 489 VCLACGGKLAIIDLDPKETEDFATLVATLALKRERTSNFDNFQKWLDDHGPFEAVMDAAN 548
Query: 326 IGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRSL-WENPSHRNLVEE 383
+GL+ SV +++AV + +R KWPL+++HN+ L +NP++ VE
Sbjct: 549 VGLFSHRH----LSVSKVNAVADAIQKRFPSRKWPLIVVHNRHLTGKHMKNPANHKWVEN 604
Query: 384 WNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
W ++Y TP GSNDDWYWLYAA++ +CL++TNDEMRDH F+LL +FF KWKERHQ
Sbjct: 605 WKRADIIYETPTGSNDDWYWLYAAIRWKCLIITNDEMRDHTFQLLEKDFFPKWKERHQV 663
>gi|255546443|ref|XP_002514281.1| multidrug resistance pump, putative [Ricinus communis]
gi|223546737|gb|EEF48235.1| multidrug resistance pump, putative [Ricinus communis]
Length = 745
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/370 (46%), Positives = 247/370 (66%), Gaps = 10/370 (2%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K AL GF ++++M + + NEA++T+VAR+A S +GD AF ++K+M + PRL
Sbjct: 237 KKYALERGFEIYEKMCMDKIPMNEATLTAVARIAMSMGNGDMAFDMVKQMK-LLGLNPRL 295
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
R+Y PAL FC + +A+KA+ VE+HM G+ E+ E+ ALL+VS E G+ +KVY L K
Sbjct: 296 RSYGPALAAFCSSGDADKAFTVEKHMLDHGVHPEEPELEALLRVSVEAGKGDKVYYLLHK 355
Query: 198 LRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKW 254
LR++VR V+ T II +WF + +V D +VK A+ GGGWHG GW+G+GKW
Sbjct: 356 LRTSVRKVSPSTANIIIEWFKSKAASRVGKTKWDKRVVKEAIANGGGGWHGQGWLGKGKW 415
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314
V SV C SCG +LA +D+D ETE FA+SVA++A++RE ++F +FQ WL+
Sbjct: 416 TVSCSSVGVDAFCKSCGKKLATIDLDPTETESFAESVASIAIKREKDSSFQKFQKWLDYY 475
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRS-LW 372
+EA+VDGAN+GL Q F +++A+ + ++ KWPL++LHN+R+
Sbjct: 476 GPFEAVVDGANVGLLGQK----RFIPSKINAIANGIRQKLPSKKWPLIVLHNRRVTGHKM 531
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNF 432
+ P +++LVE+W LY TP GSNDDWYWLYAA+K +CL+VTNDEMRDH F+LLG++F
Sbjct: 532 DEPVNKSLVEKWKHADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMRDHTFQLLGNDF 591
Query: 433 FLKWKERHQT 442
F KWKERHQ
Sbjct: 592 FPKWKERHQV 601
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 13 NKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA 72
+K+ K +P E F + L C K D+ AI LY+ A + +++ +H+ LLYLCS +A
Sbjct: 45 SKRNKGDPQ-EVKFRLELDKCCKRGDVMAAIQLYDLAQREGIKMGQYHYTVLLYLCSSAA 103
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
+ R G +S+ V + ASV L KND D K +NN
Sbjct: 104 AGVVQPGKSGRGGRASNSLAVSDEV--SSASVVEFREL-RDKNDVDATESDTKILNNVNK 160
Query: 133 VV 134
V+
Sbjct: 161 VI 162
>gi|218190470|gb|EEC72897.1| hypothetical protein OsI_06719 [Oryza sativa Indica Group]
Length = 719
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 247/391 (63%), Gaps = 19/391 (4%)
Query: 65 LYLCSDSATDPSS-------KDSALRHGFRVFDQMLS--NNVIPNEASVTSVARLAASKN 115
L+ D PS ++ A GF +F++M S V NE+++T+VAR+A S
Sbjct: 280 LFASDDGTEKPSRIPVSDELREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMG 339
Query: 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEI 175
+GD AF ++K+M ++ + P+LR+Y PAL FC + EKA+EVE HM G+ E+ E+
Sbjct: 340 NGDMAFDVVKQMKDQ-GIAPKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPEL 398
Query: 176 AALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLV 232
LLK S + +KVY L K R+TVR + T K++EDWF + KV D G +
Sbjct: 399 ETLLKASVAAQQGDKVYYLLHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDAGAI 458
Query: 233 KNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVA 292
A+ NGGGWHGLGW+G+GKW + +D +G C +CG++L +D+D ETE FA VA
Sbjct: 459 TKAIENNGGGWHGLGWLGRGKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVA 518
Query: 293 ALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYE 352
LA++RE ++NF FQ WLEK+ ++A+VDGAN+GL F+ S+ +++ V + +
Sbjct: 519 KLAIKRERRSNFDNFQKWLEKHGPFDAVVDGANVGL----FSHKHISLSKINIVADVIRQ 574
Query: 353 R-SGNKWPLVILHNKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
R K PL+++HN+ L + PS+R LVE+W +Y TP GSNDDWYWLYAA++
Sbjct: 575 RFQSRKLPLIVVHNRHLTGERMQKPSNRKLVEKWKLSNAIYATPTGSNDDWYWLYAAIRC 634
Query: 411 RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
+CL+VTNDEMRDH F+LL +FF KWKERHQ
Sbjct: 635 KCLMVTNDEMRDHTFQLLERDFFPKWKERHQ 665
>gi|115445507|ref|NP_001046533.1| Os02g0273800 [Oryza sativa Japonica Group]
gi|47848046|dbj|BAD21831.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536064|dbj|BAF08447.1| Os02g0273800 [Oryza sativa Japonica Group]
gi|215697065|dbj|BAG91059.1| unnamed protein product [Oryza sativa Japonica Group]
gi|326324779|dbj|BAJ84577.1| P0413A11.14-1 [Oryza sativa Indica Group]
Length = 719
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 247/391 (63%), Gaps = 19/391 (4%)
Query: 65 LYLCSDSATDPSS-------KDSALRHGFRVFDQMLS--NNVIPNEASVTSVARLAASKN 115
L+ D PS ++ A GF +F++M S V NE+++T+VAR+A S
Sbjct: 280 LFASDDGTEKPSRIPVSDELREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMG 339
Query: 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEI 175
+GD AF ++K+M ++ + P+LR+Y PAL FC + EKA+EVE HM G+ E+ E+
Sbjct: 340 NGDMAFDVVKQMKDQ-GIAPKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPEL 398
Query: 176 AALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLV 232
LLK S + +KVY L K R+TVR + T K++EDWF + KV D G +
Sbjct: 399 ETLLKASVAAQQGDKVYYLLHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDSGAI 458
Query: 233 KNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVA 292
A+ NGGGWHGLGW+G+GKW + +D +G C +CG++L +D+D ETE FA VA
Sbjct: 459 TKAIENNGGGWHGLGWLGRGKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVA 518
Query: 293 ALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYE 352
LA++RE ++NF FQ WLEK+ ++A+VDGAN+GL F+ S+ +++ V + +
Sbjct: 519 KLAIKRERRSNFDNFQKWLEKHGPFDAVVDGANVGL----FSHKHISLSKINIVADVIRQ 574
Query: 353 R-SGNKWPLVILHNKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
R K PL+++HN+ L + PS+R LVE+W +Y TP GSNDDWYWLYAA++
Sbjct: 575 RFQSRKLPLIVVHNRHLTGERMQKPSNRKLVEKWKLSNAIYATPTGSNDDWYWLYAAIRC 634
Query: 411 RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
+CL+VTNDEMRDH F+LL +FF KWKERHQ
Sbjct: 635 KCLMVTNDEMRDHTFQLLERDFFPKWKERHQ 665
>gi|222622584|gb|EEE56716.1| hypothetical protein OsJ_06217 [Oryza sativa Japonica Group]
Length = 711
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 245/395 (62%), Gaps = 18/395 (4%)
Query: 65 LYLCSDSATDPSS-------KDSALRHGFRVFDQMLS--NNVIPNEASVTSVARLAASKN 115
L+ D PS ++ A GF +F++M S V NE+++T+VAR+A S
Sbjct: 265 LFASDDGTEKPSRIPVSDELREYARTRGFEIFEKMRSEEEKVPMNESALTAVARMAMSMG 324
Query: 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEI 175
+GD AF ++K+M ++ + P+LR+Y PAL FC + EKA+EVE HM G+ E+ E+
Sbjct: 325 NGDMAFDVVKQMKDQ-GIAPKLRSYGPALTAFCNSGNVEKAFEVEAHMLESGVRPEEPEL 383
Query: 176 AALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLV 232
LLK S + +KVY L K R+TVR + T K++EDWF + KV D G +
Sbjct: 384 ETLLKASVAAQQGDKVYYLLHKFRTTVRQASSTTAKLLEDWFQSPTASKVGKRKWDSGAI 443
Query: 233 KNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVA 292
A+ NGGGWHGLGW+G+GKW + +D +G C +CG++L +D+D ETE FA VA
Sbjct: 444 TKAIENNGGGWHGLGWLGRGKWTISHSHIDRNGACLACGEKLTIIDLDPKETEDFATLVA 503
Query: 293 ALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGG---FSVPQLDAVVKK 349
LA++RE ++NF FQ WLEK+ ++A+VDGAN+GL+ F Q++ V
Sbjct: 504 KLAIKRERRSNFDNFQKWLEKHGPFDAVVDGANVGLFSHKHISLSLYLFLTGQINIVADV 563
Query: 350 LYER-SGNKWPLVILHNKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAA 407
+ +R K PL+++HN+ L + PS+R LVE+W +Y TP GSNDDWYWLYAA
Sbjct: 564 IRQRFQSRKLPLIVVHNRHLTGERMQKPSNRKLVEKWKLSNAIYATPTGSNDDWYWLYAA 623
Query: 408 VKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
++ +CL+VTNDEMRDH F+LL +FF KWKERHQ
Sbjct: 624 IRCKCLMVTNDEMRDHTFQLLERDFFPKWKERHQV 658
>gi|242060047|ref|XP_002459169.1| hypothetical protein SORBIDRAFT_03g047110 [Sorghum bicolor]
gi|241931144|gb|EES04289.1| hypothetical protein SORBIDRAFT_03g047110 [Sorghum bicolor]
Length = 414
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 161/211 (76%)
Query: 232 VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSV 291
VK+A++ NGGG H LGW+G G W V+R V C C +LAC+DID ET RFA SV
Sbjct: 105 VKDAIVANGGGCHRLGWLGTGPWTVQRVRVGADDHCGGCRYRLACIDIDMEETRRFADSV 164
Query: 292 AALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLY 351
A LA+ERE K NFS FQ+WLE N Y+AIVDGANI LYQQNF EGGFS+ QLDAV+ +L
Sbjct: 165 AGLALERETKTNFSRFQEWLEANKEYQAIVDGANIALYQQNFAEGGFSLTQLDAVITELR 224
Query: 352 ERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR 411
+R KWPLVILH+KR+ L EN S+R+L+E W G LY +P GSNDDWYWLYAA+KL
Sbjct: 225 DRYHGKWPLVILHDKRIAKLMENSSNRHLIETWRTNGALYTSPSGSNDDWYWLYAAIKLN 284
Query: 412 CLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
CLLVTNDEMRDHIFELLGS+FF KWK+RH+
Sbjct: 285 CLLVTNDEMRDHIFELLGSSFFPKWKQRHRV 315
>gi|302776824|ref|XP_002971555.1| hypothetical protein SELMODRAFT_147976 [Selaginella moellendorffii]
gi|300160687|gb|EFJ27304.1| hypothetical protein SELMODRAFT_147976 [Selaginella moellendorffii]
Length = 421
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/369 (45%), Positives = 233/369 (63%), Gaps = 8/369 (2%)
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
D LR G +F+QM + NV PNEA+ T++ARL+ +K DGD AF ++K M + P+LR
Sbjct: 3 DGFLRKGLEIFEQMQAENVAPNEATFTALARLSVAKRDGDLAFEIVKAMIAA-KIPPKLR 61
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y PAL+ + + +AEKA+EV HM + G+ E+ E+ LL +S++ ++VY L L
Sbjct: 62 CYGPALYVYFKRNDAEKAFEVYNHMLVHGVQPEEAELEVLLHLSSKACLGDRVYLLLHHL 121
Query: 199 RSTVRCVNEETGKIIEDWFSGQ---KVNGVSCDLGL-VKNAVLKNGGGWHGLGWIGQGKW 254
R TVR V++ T +IE WF +V G S V+ + L GGGWHGLGW+GQG W
Sbjct: 122 RETVRDVSQSTVSVIERWFKSDFAGRVTGNSLPGDFDVRCSSLAKGGGWHGLGWLGQGIW 181
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314
V S+ G CC C +Q+ +DI +T+ FA+ +A+LA +RE +F F+DWL++N
Sbjct: 182 NVGYTSLTAEGVCCRCNEQMVTIDITPEDTDVFAKCIASLAFKRESNNSFGIFKDWLDRN 241
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKR-LRSLWE 373
+E +VDGAN+G Y Q F G + QL+ VV + RSG KWPL++LH R ++
Sbjct: 242 GPFETVVDGANVGFYNQRFN-GELNFAQLETVVADVQRRSG-KWPLIVLHVGRTMKGSGR 299
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFF 433
+ + L+ W+ LY+ P GSNDDWYWLYAAVK + LLV+NDEMRDHIF+LLG FF
Sbjct: 300 SSYAQQLLRHWSNAKALYIAPAGSNDDWYWLYAAVKCKSLLVSNDEMRDHIFQLLGREFF 359
Query: 434 LKWKERHQT 442
WKERHQ
Sbjct: 360 PTWKERHQV 368
>gi|218189813|gb|EEC72240.1| hypothetical protein OsI_05356 [Oryza sativa Indica Group]
Length = 602
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 211/342 (61%), Gaps = 11/342 (3%)
Query: 21 NPETNFLINLQSCTKSKDLTTAISLYESAHS--QNLRLSLHHFNALLYLCSDSATDPSSK 78
P ++ L CT+ D A++ +++A S RL H +N L +L + + D S
Sbjct: 21 GPNSDLSRTLTDCTRRGDAAAAMAAFDTALSGPDAPRLLAHQYNQLFHLLATA--DADSL 78
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND----GDYAFVLIKRMNNEFNVV 134
+A RVF ML + P+EA++TS+AR+ AS D AF L+ M +++ V
Sbjct: 79 PNAAAAARRVFSHMLGSGASPSEATITSLARVTASDASNPAAADEAFDLVATMRDKYGVA 138
Query: 135 PRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
PRLR+Y P L F +A KAY V+ HM ++ E+ EIAAL VSA+ G +KVY+Y
Sbjct: 139 PRLRSYSPVLAAFRRAGDAGKAYAVDAHMEASAVAPEEPEIAALFDVSAKAGDADKVYEY 198
Query: 195 LQKLRSTVRCVNEETGKIIEDWFSGQKV---NGVSCDLGLVKNAVLKNGGGWHGLGWIGQ 251
+ KL TV CV EET +++E WF K D VK+A++ NGGG H LGW+G
Sbjct: 199 MHKLSRTVDCVGEETAEVLEGWFRSDKAAMAGKAEWDACNVKDAIVANGGGCHRLGWLGS 258
Query: 252 GKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWL 311
G W V+R V +G+C CG +LACVDID ET+RFA SVA LA++RE K NFS+FQ+WL
Sbjct: 259 GPWTVQRVRVGGNGQCEGCGCRLACVDIDVEETQRFADSVAGLALQRETKTNFSQFQEWL 318
Query: 312 EKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER 353
E + YEAIVDGANI LYQQNF EGGFS+ QLDAVV +L +R
Sbjct: 319 EGHGAYEAIVDGANIALYQQNFAEGGFSLTQLDAVVTELRDR 360
>gi|296081503|emb|CBI20026.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/312 (44%), Positives = 200/312 (64%), Gaps = 42/312 (13%)
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
+ P+LR+Y P LF FC+ +A++AYEV+ HM G+ E+ E+ ALL +S E+ RV++VY
Sbjct: 6 IPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVAEEPELCALLGLSVESRRVDRVY 65
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 252
+ + +LR++VR V+E T +++E WF+ + G+
Sbjct: 66 EMVHRLRASVRQVSESTAEVVERWFNSEDAAGM--------------------------- 98
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE 312
DE+G C SCG++L C+DID ETE FA S+ LA +REVKA+F +FQ+WL+
Sbjct: 99 ---------DEAGVCQSCGEKLVCIDIDPRETENFASSLTKLACQREVKADFVQFQEWLQ 149
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKRLRS- 370
++ ++A+VDGAN+ L Q FS +L++VV +L + S +K PLVILH R+
Sbjct: 150 RHGPFDAVVDGANVSLINQK----SFSFFELNSVVNRLRQISPSKRLPLVILHRSRVTGG 205
Query: 371 LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGS 430
+NP+++ L+E W + G LY TP GSNDDWYWLYAAV CLLVTNDEMRDH+F+LLG+
Sbjct: 206 PAQNPNNKKLIESWKKSGALYATPAGSNDDWYWLYAAVNCNCLLVTNDEMRDHLFQLLGT 265
Query: 431 NFFLKWKERHQT 442
+FF +WKE+HQ
Sbjct: 266 SFFPRWKEKHQV 277
>gi|242064790|ref|XP_002453684.1| hypothetical protein SORBIDRAFT_04g010320 [Sorghum bicolor]
gi|241933515|gb|EES06660.1| hypothetical protein SORBIDRAFT_04g010320 [Sorghum bicolor]
Length = 632
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 204/331 (61%), Gaps = 12/331 (3%)
Query: 78 KDSALRHGFRVFDQMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135
++ A GF +F++M S V +EA++T+ AR+A S D D AF ++K+M + + P
Sbjct: 307 REYACARGFEIFEKMCSEKERVQMSEAALTAKARMALSMGDSDMAFEIVKQMKD-LGLKP 365
Query: 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
+LR+Y PAL FC EKA+EVE HM G++ E+ E+ LL+ S R +KVY +
Sbjct: 366 KLRSYGPALTAFCNGGNVEKAFEVEAHMLESGITPEEAELETLLRASVVGRRGDKVYYLM 425
Query: 196 QKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 252
K R+TVR V+ T ++ E WF + KV D G + A+ NGGGWHG GW+G+G
Sbjct: 426 HKFRTTVRQVSPSTAELFEVWFRSPTASKVGKRKWDTGAIVKAIENNGGGWHGFGWLGRG 485
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE 312
KW V R +++++G C +CG++LA +D+D ETE FA VA LA++RE +NF FQ WL+
Sbjct: 486 KWTVTRSNINKNGVCLACGEKLAIIDLDPKETEDFATFVAKLAIKRERNSNFENFQKWLK 545
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRS- 370
K+ +EA+VD AN+GL+ S+ +++AV + R + KWPL++LHNK L
Sbjct: 546 KHGPFEAVVDAANVGLFGHRH----LSLSKVNAVADAIRLRFTSRKWPLIVLHNKHLTGE 601
Query: 371 LWENPSHRNLVEEWNEKGVLYMTPHGSNDDW 401
+ P + LVE+W + +Y TP GSNDDW
Sbjct: 602 HMKKPGNHKLVEKWKQANSIYATPTGSNDDW 632
>gi|4263696|gb|AAD15382.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 220/333 (66%), Gaps = 7/333 (2%)
Query: 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
+ S N S+ KK+ +PE L C+K D+ A+ LY+ A ++LS +H+N
Sbjct: 48 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNV 107
Query: 64 LLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
LLY+CS ++AT+ SS + L GF +F QM+ + V+PNEA+ T+ ARLA +K+D + AF
Sbjct: 108 LLYVCSLAEAATE-SSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAF 166
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
++K+M F + PRLR+Y PALF FC +A+KAYEV+ HM + E+ E+AALLKV
Sbjct: 167 DMVKQMK-AFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 225
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC---DLGLVKNAVLK 238
S +T +KVY+ LQ+LR VR V++ T +IE+WF + D+ +++AV+
Sbjct: 226 SMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVS 285
Query: 239 NGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER 298
GGGWHG GW+G GKW VKR +DE+G C C ++L C+DI+ ETE FA S+ LA ER
Sbjct: 286 GGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACER 345
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQ 331
EVKANF++FQ+WLE++ ++A++DGAN+GL Q
Sbjct: 346 EVKANFNQFQEWLERHGPFDAVIDGANMGLVNQ 378
>gi|449531908|ref|XP_004172927.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 461
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 195/303 (64%), Gaps = 10/303 (3%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
+K+ PE+ NL C+K + A+ LY+ A S ++L+ HH+N LLYLCS +
Sbjct: 96 RKKALKEAPESVLKYNLDMCSKYGQVVKALELYDEARSNGIQLNQHHYNVLLYLCSSPSL 155
Query: 74 DPSS-----KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
+S L GF +F QM+++ V PNEA+ TS+AR+AA+++D + AF L+K+M
Sbjct: 156 LETSGANNLSSVVLSRGFEIFQQMMTDKVSPNEATFTSLARIAAARDDPEMAFSLVKQMK 215
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
++++ PRLR+Y PALF FC L ++AYEV+ HM + E+ E++ALLK+S++ +
Sbjct: 216 -DYHIAPRLRSYGPALFGFCRKLMPKEAYEVDSHMLASAVEPEELELSALLKLSSDVKKA 274
Query: 189 EKVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHG 245
+KVY+ L +LR TVR V+E T K+IEDWF S +V D+ V+ +++ GGGWHG
Sbjct: 275 DKVYELLHRLRRTVRQVSEPTAKVIEDWFNSESASEVGKKHWDVDKVRECIVRRGGGWHG 334
Query: 246 LGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFS 305
GW+G GKW + R +D++G C SC +L C+DID ETE FA S+ LA +R VKA+F+
Sbjct: 335 EGWLGSGKWKLVRTGIDDNGVCHSCAQKLVCIDIDPKETEDFASSLTKLANQR-VKADFN 393
Query: 306 EFQ 308
FQ
Sbjct: 394 NFQ 396
>gi|296082798|emb|CBI21803.3| unnamed protein product [Vitis vinifera]
Length = 339
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 194/312 (62%), Gaps = 42/312 (13%)
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
+ P+LR+Y P LF FC+ +A +AYEV+ HM G+ E+ E+ ALL +S E+ V++VY
Sbjct: 6 IPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVAEEPELCALLGLSVESRWVDQVY 65
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 252
+ + +LR++VR V+E T +++E WF+ + G+
Sbjct: 66 EMMHRLRASVRQVSESTAEVVERWFNSEDAAGM--------------------------- 98
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE 312
DE+G C SCG++L +DID ETE FA S+ LA +REVKA+F +FQ+WL+
Sbjct: 99 ---------DEAGVCQSCGEKLVGIDIDPRETENFASSLTKLACQREVKADFVQFQEWLQ 149
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKRLRS- 370
+ ++A+VDGAN+ L Q FS +L++VV L + S +K PLVILH R+
Sbjct: 150 WHGPFDAVVDGANVSLINQK----SFSFFELNSVVNCLRQISPSKQLPLVILHRSRVTGG 205
Query: 371 LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGS 430
+NP++ L++ W + G LY TP GSNDDWYWLYAAV CLLVTNDEMRDH+F+LLG+
Sbjct: 206 PAQNPNNEKLIQSWKKSGALYATPAGSNDDWYWLYAAVNGNCLLVTNDEMRDHLFQLLGT 265
Query: 431 NFFLKWKERHQT 442
+FF +WKE+HQ
Sbjct: 266 SFFPRWKEKHQV 277
>gi|307135991|gb|ADN33849.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 302
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 189/302 (62%), Gaps = 10/302 (3%)
Query: 15 KRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATD 74
K+ + PE L C+K + A+ LY+ A S ++L LHH+N LLYLCS +
Sbjct: 2 KKDSRDAPENVLRYKLDMCSKYGQVVKALELYDEARSDGVQLILHHYNVLLYLCSSPSLL 61
Query: 75 PSSKDS-----ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S + L G ++ QM+++ V PNEA+ TS+AR+A + +D + AF L+K+M +
Sbjct: 62 ETSGANNLLSVVLSRGLEIYQQMITDKVSPNEATFTSLARIAGAMDDPEMAFSLVKQMED 121
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+++ PRLR+Y PALF FC L E AYEV+ HM + E+ E++ALLK+S++ R +
Sbjct: 122 -YHIAPRLRSYGPALFGFCRKLMPEGAYEVDSHMLASAVEPEEPELSALLKLSSDVKRAD 180
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWF---SGQKVNGVSCDLGLVKNAVLKNGGGWHGL 246
KVY+ L +LR TVR V+E T K+IEDWF S +V D+ V+ +++ GGGWHG
Sbjct: 181 KVYELLHRLRRTVRQVSEPTAKVIEDWFNSESASEVGKKHWDVDKVREGIVRRGGGWHGE 240
Query: 247 GWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSE 306
GW+G GKW + R +D++G C SC +L C+DID ETE FA S+ LA +R VK NF +
Sbjct: 241 GWLGSGKWRLVRTGIDDNGVCHSCAQKLVCIDIDPKETEDFASSLTKLANQR-VKDNFGK 299
Query: 307 FQ 308
F+
Sbjct: 300 FR 301
>gi|38567837|emb|CAE05786.2| OSJNBb0020J19.15 [Oryza sativa Japonica Group]
Length = 344
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/318 (44%), Positives = 203/318 (63%), Gaps = 15/318 (4%)
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
P LR+Y PALF +C+ +A+ A EVE HM G+ E+ E+AALL+V++ GR ++VY
Sbjct: 6 TAPHLRSYGPALFAYCDAGDADGATEVEAHMDASGVVPEEAELAALLRVNSARGRPDQVY 65
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCD---LGLVKNAVLKNGGGWHGLGWI 249
+ L + R +R V + T +++E WF+ + D VK + GGGWHG GW+
Sbjct: 66 RLLHRARVLLRQVADATAQLLESWFASHAASEAGLDHWDATKVKQGLRNGGGGWHGQGWL 125
Query: 250 GQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQ- 308
G+G+W V R +D+ G C CG++L C+DID +ET FA+SVA +A+ R+ ANF +FQ
Sbjct: 126 GKGQWTVARTDMDKDGTCHRCGEKLVCIDIDPSETHSFAESVAQIAINRD--ANFVKFQI 183
Query: 309 ---DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILH 364
WLE + ++A++D AN+GLY +N FS +++ VV + + K PL+ILH
Sbjct: 184 YCIKWLECHGPFDAVIDAANVGLYNRN----SFSFYEVNRVVNGIQRITKSKKLPLIILH 239
Query: 365 NKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDH 423
R+ + P ++ L+E W G LY TP GSNDDWYWLYAAV R LLVTNDEMRDH
Sbjct: 240 KNRVNGGPAKLPQNQKLLESWQRAGALYATPPGSNDDWYWLYAAVIYRSLLVTNDEMRDH 299
Query: 424 IFELLGSNFFLKWKERHQ 441
+F+LLG++FF +WKE HQ
Sbjct: 300 LFQLLGTSFFPRWKENHQ 317
>gi|297739451|emb|CBI29633.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 133/149 (89%)
Query: 294 LAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER 353
+AMEREV++NF EFQDWL+K+A+YEAIVDGANIGLYQQNF G FS+PQLDAVVK+LY+R
Sbjct: 1 MAMEREVRSNFREFQDWLDKHADYEAIVDGANIGLYQQNFANGEFSIPQLDAVVKELYDR 60
Query: 354 SGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCL 413
S K PLVILHNKR R L EN S+R L++EW +GVLY TP+GSNDDWYWLYAAVKL+CL
Sbjct: 61 SQKKRPLVILHNKRFRKLSENASNRKLLQEWLTQGVLYTTPNGSNDDWYWLYAAVKLKCL 120
Query: 414 LVTNDEMRDHIFELLGSNFFLKWKERHQT 442
LVTNDEMRDHIFELLGS+FFLKWKERHQ
Sbjct: 121 LVTNDEMRDHIFELLGSSFFLKWKERHQV 149
>gi|147855560|emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
Length = 696
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 174/308 (56%), Gaps = 30/308 (9%)
Query: 2 SNTTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHF 61
S+ + S +K+ +PE C+K D+ A+ LY+ A S+ + LS H++
Sbjct: 391 SSAAAKTMSNKTRKKARRESPEGVLRFKTDMCSKHGDVVEALHLYDEARSRGVPLSQHNY 450
Query: 62 NALLYLCSDSAT--DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDY 119
N LLYLCS S + D + + AL+ GF +F QM + + PNEA+ TS RLA + D +
Sbjct: 451 NVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSATRLACAMEDPEM 510
Query: 120 AFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
AF L+K+M + + P+LR+Y P LF FC+ +A++AYEV+ HM G+ E+ E+ ALL
Sbjct: 511 AFNLVKQMKS-CGIPPKLRSYGPPLFRFCKKGDADRAYEVDAHMVESGVVAEEPELCALL 569
Query: 180 KVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKN 239
+S E+ V++V++ + LR++VR V+E T +++E WF+ +
Sbjct: 570 GLSVESRWVDQVHEMMHHLRASVRQVSESTAEVVERWFNSEDA----------------- 612
Query: 240 GGGWHGLGWIGQGKWVVKR---GSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM 296
+G+ W V + +DE+G C SCG++L +DID ETE FA S+ LA
Sbjct: 613 -------ARVGEENWDVGKVVGTEMDEAGVCQSCGEKLVGIDIDPRETENFASSLTKLAC 665
Query: 297 EREVKANF 304
+REVKA+F
Sbjct: 666 QREVKADF 673
>gi|301120109|ref|XP_002907782.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106294|gb|EEY64346.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 505
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 213/449 (47%), Gaps = 49/449 (10%)
Query: 10 SKPNKKRKTNPNP----ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL 65
+K ++R+ P E + I +Q C + D T A+ +YE + + ++ + ++ ++
Sbjct: 27 TKTQRRRERKQTPAEKLEYQYRIQVQKCAQENDATRALEVYEQMKREGVNVAPYIYSVVI 86
Query: 66 YLCSDSATDPSSKDSALRHG-FRVFDQMLSNNVIPN--------EASVTSVARLAASKND 116
+CS A DP+ A ++G + V+ M + E +++ +L + D
Sbjct: 87 NVCS-KADDPA----AFKNGAYNVYQDMKQASAASKQKKKSDSSEPMYSAMIKLCSKAQD 141
Query: 117 GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIA 176
D ++I M V P+LRT+ P L + +K V E + L L + +
Sbjct: 142 FDTCEIIITEMEVA-KVDPKLRTFSPLLQALSDAGNLDKCIGVHEKLLSHELELTEDDYV 200
Query: 177 ALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAV 236
ALL+ S + G E+ Y +L + + T ++++WF+ + A
Sbjct: 201 ALLRASVKAGSGERFYAFLDSFIDEIWQPSLSTWDVLKEWFNSE--------------AA 246
Query: 237 LKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM 296
NG W + GSV G C GDQL V++ T + L
Sbjct: 247 RMNGRTWK-----------ITEGSVSREGVCFVTGDQLQSVELSAKSTAELLAKIENLVR 295
Query: 297 EREVK-ANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSG 355
E + + EF+ WLE+ Y+ ++D AN+G QNF GGF+ Q++ +V+ YE +
Sbjct: 296 TDEKRMTQWDEFKQWLEEFGPYDVVIDAANVGYCNQNFEGGGFNYAQIELMVQH-YE-AQ 353
Query: 356 NKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCL 413
+K LV+LH +R HR + EW ++ +G+NDDWYWLYAAVKL R L
Sbjct: 354 DKKVLVVLHERRTSDEEVPAEHRAQIAEWQASHKMFNCQYGNNDDWYWLYAAVKLGGRTL 413
Query: 414 LVTNDEMRDHIFELLGSNFFLKWKERHQT 442
L++NDEMRDH F+++ + F +WKERHQ
Sbjct: 414 LISNDEMRDHHFQMIHNRAFRRWKERHQV 442
>gi|384253474|gb|EIE26949.1| hypothetical protein COCSUDRAFT_59444 [Coccomyxa subellipsoidea
C-169]
Length = 581
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 187/365 (51%), Gaps = 29/365 (7%)
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
R G ++ + +E T++AR+AA++ D A R + +LR++ P
Sbjct: 193 RRGKELWQTLKERGGGKSEVCYTALARMAATEGKPDQALD-AAREALATGLHLKLRSFVP 251
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202
AL +C + A++V+E + L L + E A L+ V A + L ++ +
Sbjct: 252 ALKAYCAAGNVDAAFKVDELIAEQELDLTEDEYALLIGVCAYGAVWARAEGVLTRIAREL 311
Query: 203 RCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGK-WVVKRGSV 261
+ E T +E +F +G+G+ WV++R SV
Sbjct: 312 TALQEGTLAAVERFFRSPSAAQS-----------------------LGEGQSWVLERCSV 348
Query: 262 DESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK-ANFSEFQDWLEKNANYEAI 320
ESG+ C QL VD+ E FA+ +AALA ++E + ++F F+ W+++N Y +
Sbjct: 349 SESGQPSCCDGQLEAVDLSPEEYHAFAEGIAALARQKEKRPSDFDTFRAWVDRNGPYGCL 408
Query: 321 VDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRS-LWENPSHRN 379
+DGAN+ L+ QN+ GGFS Q+ AV+ +L E + PL++LH R+++ L
Sbjct: 409 IDGANVALFGQNWEAGGFSFAQISAVLDQLREERPDLKPLLMLHQSRVKAELARERRAAA 468
Query: 380 LVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNFFLKWK 437
L+E + Y TP GSNDDWYWLYAAVK L+V+ DEMRDH+F+LL +F KWK
Sbjct: 469 LLERLRRDHLFYTTPFGSNDDWYWLYAAVKSGPDALIVSCDEMRDHLFQLLAPKYFRKWK 528
Query: 438 ERHQT 442
+RHQ
Sbjct: 529 QRHQV 533
>gi|308799561|ref|XP_003074561.1| unnamed protein product [Ostreococcus tauri]
gi|116000732|emb|CAL50412.1| unnamed protein product [Ostreococcus tauri]
Length = 506
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 208/454 (45%), Gaps = 55/454 (12%)
Query: 13 NKKRKTNP-NPETNFLINLQSCTKSKDLTTAISLYESAHSQ--NLRLSLHHFNALLYLCS 69
KKR +P P + + + + A +E A + L+ H N LL++C+
Sbjct: 39 GKKRGGDPFGPAAVARRAIDAACQRDEFDAAWKTFEEAREKEGTYTLAPHSCNVLLHMCA 98
Query: 70 DSA---TDPSSKDSALR--HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLI 124
+ T + +R + M + + NE S T++AR+ A+ D D A
Sbjct: 99 GGSGAWTSGMASAECVRGDKAVEITSYMEKHGIAMNEMSYTALARVRAASGDVDGALEAA 158
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184
+ E + P++RTY AL + K V+ M GL + E +LK
Sbjct: 159 A-LCKEKKLTPKVRTYACALHACARGGDLRKMERVDAIMRGHGLLPTELEFMEMLKAYRI 217
Query: 185 TGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWH 244
+ + L+K+R+ +RC ++E + + WF
Sbjct: 218 AEEFDAGFDMLRKMRTEIRCPSDEMCEELRVWFGAAP----------------------- 254
Query: 245 GLGWIGQGKWVVKRGSVDESGKCCSC--------GDQLACVDIDDAETERFAQSVAALAM 296
GW V SVDE+G + QL + + + E E +A LA
Sbjct: 255 --GWC-----VADEVSVDEAGTAVAVLVMDEKRIQIQLKAISLTEDERENLLSGIAKLAC 307
Query: 297 EREVKANFSEFQDWLE-KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYE--R 353
ERE + F F +WL+ K A+VDGAN+G+Y QNF+ G + Q++ V++KL + R
Sbjct: 308 EREAISEFENFMNWLKGKKDGMNAVVDGANVGMYNQNFSTSGMNFNQVEKVLEKLRQNAR 367
Query: 354 SGNKWPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL-- 410
G+ P+V LH +R+ P ++ + +W+ G L+ T HGSNDDWYWLYAAV
Sbjct: 368 EGDAPPMVFLHQRRVENGPARKPQNQERLAKWDSAGELFTTAHGSNDDWYWLYAAVHAGD 427
Query: 411 RCLLVTNDEMRDHIFELLGS--NFFLKWKERHQT 442
+ +LVTNDE RDH+F++L + F +WKERHQ
Sbjct: 428 KAVLVTNDECRDHVFQMLPAPQGLFYRWKERHQV 461
>gi|325183720|emb|CCA18179.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 481
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 219/448 (48%), Gaps = 43/448 (9%)
Query: 3 NTTSTNPSKPNKKRKTNPNPETNFLIN----LQSCTKSKDLTTAISLYESAHSQNLRLSL 58
+++++N K +R E + ++ C KS D A+S + QNL +
Sbjct: 19 HSSASNYGKKKARRLRRQTDEEKLIAESRRGIELCVKSGDAIGALSTLQRLKDQNLEVPP 78
Query: 59 HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQM--LSNNVIPNEASVTSVARLAASKND 116
+ + L CS S D+ + F++F++M ++N + +E ++T++ R+
Sbjct: 79 YLYRVTLNACSQSL----KVDTLVDQTFKLFEEMESITNQKLIDENTLTAMIRICVQSKQ 134
Query: 117 GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIA 176
D +L +M N +++ P+LRT+ L + EKA E++ + G+ + + E
Sbjct: 135 LDRCALLFDKMRN-YDIKPKLRTFSSLLSAYAAAGTLEKALEMKSMIEQNGIKMTESEYI 193
Query: 177 ALLK-VSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNA 235
ALL SAE+ RV L + + + T I+ W++ + A
Sbjct: 194 ALLDGCSAESDRV-LFRTMLDEFAQNIMVPSRSTWDNIKHWYT--------------RGA 238
Query: 236 VLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAAL- 294
+ +G KW + +VD +G C ++L +D+ E + + AL
Sbjct: 239 ICVDGE-----------KWDCQVINVDANGCCPLTKNRLKSIDLTLEEKQELLDKIEALI 287
Query: 295 AMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS 354
ME E A + EF++W +++ Y+ IVD AN+ Y QNF GGF+ Q+ V+ + Y++
Sbjct: 288 GMEEEKLAQWKEFKEWHDQHGPYDVIVDAANVAYYNQNFEGGGFNYRQITRVIDR-YQKL 346
Query: 355 GNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR--C 412
G K LV+LH + + ++R+++ +W +Y G+NDDWYWLYAAV+ R
Sbjct: 347 GKK-VLVVLHKRHMSEGRIPEAYRSILTDWISSQTMYNCLPGNNDDWYWLYAAVQGRIGA 405
Query: 413 LLVTNDEMRDHIFELLGSNFFLKWKERH 440
LV+NDEMRDH F+++ + F WKERH
Sbjct: 406 YLVSNDEMRDHHFQMIQNETFGLWKERH 433
>gi|348689807|gb|EGZ29621.1| hypothetical protein PHYSODRAFT_252680 [Phytophthora sojae]
Length = 512
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 205/455 (45%), Gaps = 68/455 (14%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
E + I +Q+C D A+ +YE S+ + ++ + +N ++ +CS + K A
Sbjct: 41 EYQYRIQVQNCAHDNDAARALQVYEQMKSEGVNVAPYIYNVVINVCSRMEDLAAFKSGA- 99
Query: 83 RHGFRVFDQM-----------------LSNNVIPNEASVTSVARLAASKNDGDYAFVLIK 125
+ V+ M +P E +++ ++ + D + LI
Sbjct: 100 ---YAVYQDMKEACDNAKQQQQKGKKKHQQQQVP-EPIYSAMVKICSKAQDFEACETLIA 155
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185
M E V P+LRT+ P L + +K V + L + + ALL+ +
Sbjct: 156 EME-EAKVEPKLRTFGPLLQAHSDAGHLDKCIWVHDKFLKNELEPTEADYVALLRACVKA 214
Query: 186 GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHG 245
G ++ Y +L + V + T ++++WFS +
Sbjct: 215 GDAQRFYAFLDRFIDDVWQPSLTTWDVLKEWFSSEAAQ---------------------- 252
Query: 246 LGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAAL----------A 295
+ KW + G+V + G C GDQL +++ T V A+ A
Sbjct: 253 ---VDGRKWKITEGTVSKEGVCSVTGDQLQSLELSPELTSELLAKVIAVVVYVNAGEWAA 309
Query: 296 MEREV------KANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKK 349
+E+ V KA + EF+ WLE+ ++ ++D AN+G QNF GGF+ Q++ +V+
Sbjct: 310 IEKLVRTDEKRKAQWDEFKQWLEEFGPFDVVIDAANVGYCNQNFEGGGFNYKQIELMVQH 369
Query: 350 LYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK 409
YE G K LV+LH +R P HR + +W ++ G+NDDWYWLYAAVK
Sbjct: 370 -YEAQGKK-VLVVLHERRTSDEQVPPEHRAQLAQWRADHKMFNCQQGNNDDWYWLYAAVK 427
Query: 410 L--RCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
L R L+V+NDEMRDH F+++ + F +WKERHQ
Sbjct: 428 LGGRTLMVSNDEMRDHHFQMIHNRAFGRWKERHQV 462
>gi|307108020|gb|EFN56261.1| hypothetical protein CHLNCDRAFT_145111 [Chlorella variabilis]
Length = 579
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 160/304 (52%), Gaps = 31/304 (10%)
Query: 132 NVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKV 191
V P+LR++ PAL + E E KA+EV+ + L L + E L++ +A
Sbjct: 245 GVAPKLRSFTPALIAYAEAGECAKAFEVDAAIAAHQLDLGEPEFGRLVQAAAAGASWAAA 304
Query: 192 YQYLQKLRSTVRCVNEETGKIIEDWFS----GQKVNGVSCDLGLVKNAVLKNGGGWHGLG 247
L+++ + + + + + F+ + GV
Sbjct: 305 LGVLRRIGAELTTLQPASLARVAALFASPTAARAFEGVP--------------------- 343
Query: 248 WIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN-FSE 306
G G+W V +VD +G+C CG +LA +D+ E +FAQ +AA+A +E + N F +
Sbjct: 344 --GGGRWEVGPAAVDGAGRCSRCGGRLAALDLSGEELRQFAQGIAAIAERQERRPNDFKQ 401
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ WLE++ + A+VDGAN+ LY QNF GGF+ Q+ AV L R + PL++L+
Sbjct: 402 FKCWLEEHGPFGAVVDGANVALYGQNFDSGGFNFGQIRAVCDHLASRHPDLKPLLLLNVG 461
Query: 367 RLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH 423
R + + P+ + L+ E E Y+TP GSNDDWYW+YAAV R LLV+NDEMRDH
Sbjct: 462 RTKAAQARAPAAQALMRELGEAKSFYVTPAGSNDDWYWIYAAVTAGERGLLVSNDEMRDH 521
Query: 424 IFEL 427
IF+L
Sbjct: 522 IFQL 525
>gi|412992232|emb|CCO19945.1| predicted protein [Bathycoccus prasinos]
Length = 557
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 232/499 (46%), Gaps = 78/499 (15%)
Query: 13 NKKRKTNPNPET---------NFLINLQSCTKSKDLTT------AISLY-ESAHSQNLRL 56
NK+ K N P+T N + Q+ K D + A + Y ES ++ + L
Sbjct: 4 NKRHKPNDTPDTPDGVNGGVINRQLTFQTRKKIDDAASRNDRRLAFTTYDESKNNPAIAL 63
Query: 57 SLHHFNALLYLCS--DSATDPSSKDSALRHGFRVFDQMLSNN----------VIPNEASV 104
+H N LL+LCS D S+K+ +F +++ ++ E S
Sbjct: 64 PMHTLNVLLHLCSANDENDSFSTKEEDKERAEEIFFRLMKDSEEEEDKHQQGRRKTEMSY 123
Query: 105 TSVARLAASKNDGDYAFVLIKRMNN---------------EFNVVPRLRTYDPALFCFCE 149
T++AR+ A + + +F ++ N + + P+LRTY P+L FCE
Sbjct: 124 TAMARVYARNGEFEKSFEMVDLCKNGGALGKGKDGGGKKTQQKLTPKLRTYAPSLRGFCE 183
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV--EKVYQYLQKLRSTVRCVNE 207
+ ++A +V E + GL + E A++ V + E ++ L+K++S VR +
Sbjct: 184 SGNWKRAEDVFEAIEREGLECTEMEFTAMMSVYGREKKTCEENGFRMLRKMKSKVRTCGK 243
Query: 208 ETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKC 267
E + +E +F + N C+ ++N G + ++ S + +
Sbjct: 244 ELIESVERFFKAEP-NAWRCE-------TVENVESSSGRFEVSSENTIIGSSSDNNNNNN 295
Query: 268 CSCGDQ---------LACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE-KNANY 317
+ L V +++ E++ SV LA ERE ANF +F +WLE + A
Sbjct: 296 NNNNSNNSEKKQTFNLKRVGLNEVESKELIASVGKLAREREAGANFDDFCNWLEAREAKV 355
Query: 318 EAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-----------SGNKWPLVILHNK 366
+ IVDGAN+G+ QNF F QLD VV++ R + + P+V LH +
Sbjct: 356 QCIVDGANVGMANQNFAGSRFHFGQLDNVVEECRRRYCVCSTSDASDASKQRPVVFLHQR 415
Query: 367 RLRS-LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH 423
R + ++ ++ + + +++TPHGSNDDWYWLYAA+ +L++NDEMRDH
Sbjct: 416 RTKDHAAKHQFGEKILNKLRQNKEIFVTPHGSNDDWYWLYAALVAGEDAVLISNDEMRDH 475
Query: 424 IFELL-GSNFFLKWKERHQ 441
+F++L N +WKERHQ
Sbjct: 476 VFQMLPDPNLLRRWKERHQ 494
>gi|145341737|ref|XP_001415960.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576183|gb|ABO94252.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 374
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 175/358 (48%), Gaps = 46/358 (12%)
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
+E S T++AR+ A+ D + A + + E + P++RTY AL + + EK V
Sbjct: 2 SEMSYTALARVRAAAGDVEGALDAARALKEE-KLTPKVRTYACALHASAKKGDLEKMEAV 60
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG 219
E + GL + E A+L+ + + L+++R+ +R ++E + + WFS
Sbjct: 61 EAMLRDEGLLPTELEFMAMLRAYRAAEAFDGGFAMLRRMRTEIRSPSDEMSEELRAWFSA 120
Query: 220 QKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGD------- 272
GW V VD++G +
Sbjct: 121 VP--------------------GWS----------VADEVRVDDAGAAVAVLAMEEKRVE 150
Query: 273 -QLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLE-KNANYEAIVDGANIGLYQ 330
QL + + + E +A LA ERE ++ F F +WL K AIVDGAN+G+Y
Sbjct: 151 LQLKAISLTEEERADLLAGIAKLACEREAQSEFDNFMNWLNVKKDGMNAIVDGANVGMYN 210
Query: 331 QNFTEGGFSVPQLDAVVKKLYERS--GNKWPLVILHNKRLRS-LWENPSHRNLVEEWNEK 387
QNF+ G + Q++ V+ +L +R+ G+ P+ LH +R+ P ++ L+ +W+
Sbjct: 211 QNFSTSGMNFNQVEKVLVELRKRAKEGDAPPIAFLHQRRVEGGPARKPHNQALLAKWDGA 270
Query: 388 GVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDHIFELLGS-NFFLKWKERHQT 442
G L+ T HGSNDDWYWLYAAV + LVTNDE RDH+F++L S F +WKERHQ
Sbjct: 271 GELFTTAHGSNDDWYWLYAAVHAGDKAFLVTNDECRDHVFQMLPSPKLFYRWKERHQV 328
>gi|302832000|ref|XP_002947565.1| hypothetical protein VOLCADRAFT_120484 [Volvox carteri f.
nagariensis]
gi|300267429|gb|EFJ51613.1| hypothetical protein VOLCADRAFT_120484 [Volvox carteri f.
nagariensis]
Length = 396
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 183/362 (50%), Gaps = 20/362 (5%)
Query: 92 MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151
M S + P++ + ++AR A + A L + + + +LR + PA +C +
Sbjct: 1 MKSAGMKPDQGTYLALARREALLGNPQAALQLTQECIQDGKLA-QLRMFHPAQVGYCLSG 59
Query: 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGK 211
+ + + ++ + L + E A LL+ A G E++ L +++S + ++ ET
Sbjct: 60 DVAQLHHIDSIIASHRLDNTEYEFARLLEGIAAAGTYEQMKAVLVRMQSDMNQMSPETAG 119
Query: 212 IIEDWFSGQKVNGVSCDL-------GLVKNAVLKNGGGWHGLGWIGQGKW-VVKRGSVDE 263
I +F + GLV++ + + GG G W +W VV+ V E
Sbjct: 120 HITSFFEKNAAAQQAFAPADQGGCRGLVRH--ITDAGGDSGGEW----RWRVVQNAEVAE 173
Query: 264 SGKCCSCGDQLACVDIDDAETERFAQSVAALAMER--EVKANFSEFQDWLEKNANYEAIV 321
G+C + G + +D++D E + FA+++A LA + +F + W E+N Y+ +V
Sbjct: 174 DGRCEAAGGTVKVIDLEDEEWDAFAKAIAELARKNMGSRAGDFDAYTQWYERNGPYDIMV 233
Query: 322 DGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWEN-PSHRNL 380
D AN+ + QN GGF+ Q+ + + L +R NK LV++H KR+ P +
Sbjct: 234 DAANVAFFGQNREGGGFNWRQVQHMYEMLRQRFPNKKILVMVHRKRVSDAESRAPGVQEF 293
Query: 381 VEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR--CLLVTNDEMRDHIFELLGSNFFLKWKE 438
+E Y TP G+NDDW+W+YA+V+ + LL++NDE+RDHIF LL FLKWKE
Sbjct: 294 IERLRRARSFYHTPPGANDDWFWMYASVRAKHNGLLISNDELRDHIFSLLRPRHFLKWKE 353
Query: 439 RH 440
RH
Sbjct: 354 RH 355
>gi|428168076|gb|EKX37025.1| hypothetical protein GUITHDRAFT_145271 [Guillardia theta CCMP2712]
Length = 574
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 196/445 (44%), Gaps = 99/445 (22%)
Query: 56 LSLHH------FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVAR 109
LSL H F+ +LYL T S+ ++ +V M NV P EA T++ R
Sbjct: 37 LSLGHQPPSFVFSHVLYLLE---TQGPSRFGDVQELMKV---MKEQNVQPEEAFFTTLIR 90
Query: 110 LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
+ + A ++ M N +P+ RT+ P L CE E+A+++ M +G+
Sbjct: 91 FHLAMGNPSSAREVLGEMMKAENTLPKRRTFLPVLEAVCEGGNEEEAFKMLTLMRELGIV 150
Query: 170 LEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDL 229
+ + E L+K+ + ++ + L+++R + + + + + +WF +K + VS
Sbjct: 151 MGESEFIYLVKLCSFDYARHRMPEVLEEMRQVLYGIQQPLAEELRNWF--EKTHNVST-- 206
Query: 230 GLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQ 289
G + E G C C +L VD+ + + R +
Sbjct: 207 -----------------------------GRITEFGMCSVCQARLGIVDVKEEQVARMCE 237
Query: 290 SVAA--------------LAMEREV-----------KANFSEFQDWLEKNANYEAIVDGA 324
+ LA++ V +F F+ WLEKN ++ IVDGA
Sbjct: 238 DLEKMIQLDLDGKSNSHELALQDNVFRTGTPQGLRGGTHFKTFKAWLEKNGPWDVIVDGA 297
Query: 325 NIGLYQQNFTEG---GFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLV 381
N+G Y Q+ + + Q+D V++ L R + L+ILH + ++ NP +V
Sbjct: 298 NVGYYGQSGNQRRDLQLNYHQIDRVIRSLQRRGHSVRVLLILHAQHIKKARHNPDALKMV 357
Query: 382 EEWNEKGVLYMTPHGSNDDWYWLYAAV----KLR-CLLVTNDEMRDHIFELLGSNF---- 432
E W +G++Y+TP G NDDW+W+YA + KL+ L+++ND M+DH + L+ ++
Sbjct: 358 ERWLSEGIIYVTPSGMNDDWFWIYAGLWSTRKLKSTLILSNDGMQDHHYALVETSRKFGG 417
Query: 433 -----------------FLKWKERH 440
FLKWKERH
Sbjct: 418 EVNSKRMMADTISYHKEFLKWKERH 442
>gi|449526245|ref|XP_004170124.1| PREDICTED: proteinaceous RNase P 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 327
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 97/150 (64%), Gaps = 11/150 (7%)
Query: 300 VKANFSEF-----QDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS 354
+ NF F Q WLEK+ ++A++DGAN+GL E F+ QL V ++ E S
Sbjct: 173 IGKNFDWFEGEIIQGWLEKHGPFDAVIDGANVGL----VNERQFNFIQLKRAVYQMRELS 228
Query: 355 -GNKWPLVILHNKRLR-SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRC 412
K PL+ILH +R+ NP++ L+E W G LY TP+ NDDWYWLYAAV+ +C
Sbjct: 229 PSKKMPLIILHKRRITDGPARNPNNMKLIETWKNCGALYATPYSVNDDWYWLYAAVRFKC 288
Query: 413 LLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
LL+TNDEMRDH+F+LLG+ FF +WKE+HQ
Sbjct: 289 LLLTNDEMRDHLFQLLGNTFFPQWKEKHQV 318
>gi|219110673|ref|XP_002177088.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411623|gb|EEC51551.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 637
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 200/493 (40%), Gaps = 84/493 (17%)
Query: 29 NLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATD-------------- 74
+Q C K DL TA+ +YE A + +++ F LL LC D D
Sbjct: 75 TVQQCCKIDDLMTAMEVYEQAVADGIKMEAQSFYNLLNLC-DGLGDRSIHIGTPKQSIEL 133
Query: 75 --------------PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
P D + FR+ + M + E + T++ +L + A
Sbjct: 134 ACNESNEEILDRLRPVDIDDRRKFAFRIKEHMDGLGLPLIETAYTALIKLLSKSRQLGKA 193
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180
VL+ P+LR + P L +CE A V + + GL L ++E AL++
Sbjct: 194 EVLLDEAEGVQQCRPKLRMFAPLLSAYCETGSMIPALRVWQRLHRHGLVLSEKEYVALIR 253
Query: 181 VSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFS----------GQKVNGVSCDLG 230
+ T + + L L V + ET I WF G ++ +
Sbjct: 254 CAVITKDACVMDRVLSDLAEDVLVPSRETCLAIRAWFESPAAIATNKEGNHIDDSGIRIV 313
Query: 231 LVKNAVLKNGGGWH-GLGWIGQGKWVVKRG-SVD------ESGKCCSCGDQLACVDIDD- 281
L A ++G G + W V SVD +SG C G L + +
Sbjct: 314 LESIAYPQSGQTLSMGPVLTQKSGWTVSESCSVDTDTGALQSG--CLNGHSLKPLTVSSD 371
Query: 282 --AETERFAQSVAALAMEREVKANF-----------------------SEFQDWLEKNAN 316
E +++ E ++ F + FQ +L +
Sbjct: 372 TWQEMRNMNETIVTSGKLEEHRSQFQGGRKGKRQKMDDRLLQERQNHWTHFQKYLIRRCT 431
Query: 317 YEAI---VDGANIGLYQQNFTEGGFSVP--QLDAVVKKLYERSGNKWPLVILHNKRLRSL 371
I +DGANIG Y+QNF V Q++ +V+ ++ +K L+++HN+ S
Sbjct: 432 QRKIDLVIDGANIGYYEQNFAGAPKHVDYDQINWIVQHFLKQ--DKSVLLVMHNRHFTSQ 489
Query: 372 WENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDHIFELLG 429
S R L++ W + VLY TP G NDDW+W++AA+ L+VTNDEMRDH F++L
Sbjct: 490 MMPRSFRPLIQSWLDNDVLYRTPPGMNDDWFWMHAALYAGPGTLVVTNDEMRDHHFQMLA 549
Query: 430 SNFFLKWKERHQT 442
FL+WK+RHQ
Sbjct: 550 RRSFLRWKDRHQV 562
>gi|15239331|ref|NP_200851.1| antiporter/ drug transporter [Arabidopsis thaliana]
gi|79331594|ref|NP_001032110.1| antiporter/ drug transporter [Arabidopsis thaliana]
gi|9757745|dbj|BAB08226.1| unnamed protein product [Arabidopsis thaliana]
gi|332009946|gb|AED97329.1| antiporter/ drug transporter [Arabidopsis thaliana]
gi|332009947|gb|AED97330.1| antiporter/ drug transporter [Arabidopsis thaliana]
Length = 156
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 95/120 (79%), Gaps = 7/120 (5%)
Query: 231 LVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQS 290
+++ AVLKNGGGWHG GW+G GKW+VK+G+V +G+C SC +QLACVD ++ ET++F S
Sbjct: 1 MLREAVLKNGGGWHGHGWVGDGKWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDS 60
Query: 291 VAALAMEREVKAN-------FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
+ ALAMER+ K N FSEFQDWLEK+ +YEAIVDGANIGLYQQNF +G FS+ Q+
Sbjct: 61 LVALAMERKAKMNSCESDVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQV 120
>gi|110738688|dbj|BAF01269.1| hypothetical protein [Arabidopsis thaliana]
Length = 135
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 95/120 (79%), Gaps = 7/120 (5%)
Query: 231 LVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQS 290
+++ AVLKNGGGWHG GW+G GKW+VK+G+V +G+C SC +QLACVD ++ ET++F S
Sbjct: 1 MLREAVLKNGGGWHGHGWVGDGKWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDS 60
Query: 291 VAALAMEREVKAN-------FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
+ ALAMER+ K N FSEFQDWLEK+ +YEAIVDGANIGLYQQNF +G FS+ Q+
Sbjct: 61 LVALAMERKAKMNSCESDVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQV 120
>gi|159471043|ref|XP_001693666.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283169|gb|EDP08920.1| predicted protein [Chlamydomonas reinhardtii]
Length = 523
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER--EVKANFSEFQDWLE 312
V++ +V+ G+C + G L +D+ + E E FA ++A+LA A F F W +
Sbjct: 198 VLRSVAVERGGRCDAAGGSLRVIDLAETEWESFANAIASLARTNMGARAAEFDAFAAWYD 257
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
++ Y+ +VD AN+ Y QN GGF+ Q+ A+ + L R +K LV++H RL+
Sbjct: 258 RHGPYDILVDAANVAYYGQNREGGGFTWGQIQAMYELLTRRFPSKKVLVMVHRNRLKDPE 317
Query: 373 ENPSH-RNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDHIFELLG 429
N S + + TP G+NDDW+WLYA VK R LLV+ND +RDHIF LL
Sbjct: 318 ANTSAVQAFLGRLRSCKAFNYTPPGANDDWFWLYACVKAKRRGLLVSNDLLRDHIFSLLR 377
Query: 430 SNFFLKWKERH 440
FLKWK+RH
Sbjct: 378 PKHFLKWKQRH 388
>gi|323456990|gb|EGB12856.1| hypothetical protein AURANDRAFT_60968 [Aureococcus anophagefferens]
Length = 636
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 165/394 (41%), Gaps = 60/394 (15%)
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
P+ + F +FD M + + EA+ T + R+ A + A ++ +M N+
Sbjct: 182 PTDSGAKRAFAFELFDDMRAAGMELGEATFTMLVRVCAVDDAPAEAEGVLAKMKAR-NLK 240
Query: 135 PRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
+LRT+ P L C E +A V G+ L + E AL V GR+E
Sbjct: 241 LKLRTFSPLLKLRCRRGELAEALAVAAECRDKGIELSEAEHVAL--VDCRAGRLEAGGDA 298
Query: 195 LQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCD-----LGLVKNAVLKNGGGWHGLGWI 249
++V + D + + +C LGL A
Sbjct: 299 ASLPGASV------LDDLAADCHAPSRAAWPACRRYCAALGLTACA-------------- 338
Query: 250 GQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVK-------- 301
+ +V G C G +L +D+ +AE + + L + K
Sbjct: 339 -------EESAVSGDGACAVTGAKLRSLDLSEAERALLLEQIEGLVPAVDAKFEGQSSAQ 391
Query: 302 ----------ANFSEFQDWLEK-NANYEAIVDGANIGLYQQNFTEGGFSVP--QLDAVVK 348
A + F+ WL K A Y+ I+DGAN+G + N+ +V Q+DAV++
Sbjct: 392 ELERLAGRRMAQWRTFKAWLAKAGAPYDCIIDGANVGYHGANYAGAPDAVDFRQVDAVLR 451
Query: 349 KLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAV 408
K + G + LV+LH + L+ S R ++ W LY +NDDWYWLYAAV
Sbjct: 452 KCID--GGRRALVVLHARHLQDDRLPASARPVLHAWRRSKSLYSCALRNNDDWYWLYAAV 509
Query: 409 KLR--CLLVTNDEMRDHIFELLGSNFFLKWKERH 440
LLV+NDEMRDH F +L + FL WKERH
Sbjct: 510 AAGPGSLLVSNDEMRDHHFGMLSARAFLVWKERH 543
>gi|255083625|ref|XP_002508387.1| predicted protein [Micromonas sp. RCC299]
gi|226523664|gb|ACO69645.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 13 NKKRKTN--PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCS- 69
++KRK N P P + D A + +++A L H FN LL+LCS
Sbjct: 19 DRKRKKNFAPKPGQAARREIDVACAKGDTAAAFAAFDAAVDSGEPLQPHSFNVLLHLCSG 78
Query: 70 ---------------DSATDPSSK----DSALRHGFR---VFDQMLSNNVIPNEASVTSV 107
D AT P++K H R +F++M+ +V E + T++
Sbjct: 79 GTSTGGNYKDDAKTADGATPPAAKVVVPPKDAVHPERANAIFNKMVELDVQRTEMTYTAL 138
Query: 108 ARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMG 167
AR+ A+ + A ++KR+ +E + P+LRT+ PAL FC + E A E E + G
Sbjct: 139 ARIEAASGEPRRALDVVKRLIDE-RLTPKLRTFAPALHAFCMKGDIEGALEAEAEIANAG 197
Query: 168 LSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSC 227
+ + + E A LL A+ R E L+++R VR ++ + +F
Sbjct: 198 IEISEAEYAVLLNAYADAERWEDGLALLRRMREEVRTLSTPLVESTRRFFDRHP------ 251
Query: 228 DLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERF 287
GW + V + S QLA +++ ++
Sbjct: 252 -------------------GWRLEASAEVDEATGAASSTPSGKKMQLAAINLSASDRAAL 292
Query: 288 AQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVV 347
+ LA ERE K++F F WL K +VDGAN+G+Y QNF E F+ Q++ +
Sbjct: 293 LAGIGKLAREREAKSSFDGFVRWLAKRGPLPYLVDGANVGMYNQNFHESRFNFNQVEKAM 352
Query: 348 KKL 350
L
Sbjct: 353 NAL 355
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 344 DAVVKKLYERSGNKWPLVILHNKRLRSLWEN-PSHRNLVEEWNEKGVLYMTPHGSNDDWY 402
D V+ L + G P+ LH +R+R N P + L++ W G L++ P GSNDDWY
Sbjct: 437 DIDVEALVSKPGVDVPVNFLHVRRVRGGPANHPRAKALLDGWKRCGELFVCPAGSNDDWY 496
Query: 403 WLYAAVKL--RCLLVTNDEMRDHIFELL-GSNFFLKWKERHQT 442
WLYAAV LV+NDEMRDH F++L F KWKERHQ
Sbjct: 497 WLYAAVASGDDAFLVSNDEMRDHAFQMLPAPRLFAKWKERHQV 539
>gi|300122576|emb|CBK23145.2| unnamed protein product [Blastocystis hominis]
Length = 264
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 23/195 (11%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAMER--------------EVKANFSEFQ 308
+SG+C CG Q+ + + AE A + + +R E NF F+
Sbjct: 8 DSGECTHCGKQMQRIILPTAEKLELASEIEQVIQQRSGFDRMKRSKEGDGERMENFRRFK 67
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRL 368
+LE N ++ +DGANI Y+QNF G F+ Q+D + L ++ G K L++LH
Sbjct: 68 AFLEANGPFDIFIDGANIAHYKQNFEGGTFNYQQIDMIASYL-QQQGYK-VLIVLHEHH- 124
Query: 369 RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR--CLLVTNDEMRDHIFE 426
++ P+ +L E W E+ + Y G+NDDWYW+YAA+ R ++++ND+MRDH F+
Sbjct: 125 ---FDQPT-TDLPERWLEQKLAYKVVKGNNDDWYWMYAALSSRNDAMILSNDKMRDHFFQ 180
Query: 427 LLGSNFFLKWKERHQ 441
+ F W+E Q
Sbjct: 181 IHNDLRFQAWREYSQ 195
>gi|323450637|gb|EGB06517.1| hypothetical protein AURANDRAFT_71973 [Aureococcus anophagefferens]
Length = 939
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 172/434 (39%), Gaps = 83/434 (19%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K D +S Y A S RL++H +N +L++ +D +
Sbjct: 474 KKNDHQRTLSTYAEARSARARLNVHCYNGILHVLADRGLNGE------------------ 515
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAF-VLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N V NEAS T++AR + D A V+ R+ + P+LRTY P + C
Sbjct: 516 NRVGVNEASYTALARSHVAAGALDDALDVVATRLED---ASPKLRTYAPLVAALCAADRV 572
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213
A V M G++ + ALL+ A +G C+ E
Sbjct: 573 RDARTVWAAMAAGGVAPTDELYVALLEALARSGDAA----------GCAACLRERAAADD 622
Query: 214 EDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQ 273
+ + VS L + +A + +VD+ G C G
Sbjct: 623 AG-LAAAHLTRVSAALRSLPDATCEAT-------------------TVDDDGTCRVSGRT 662
Query: 274 LACVDIDDAETERFAQ---SVAALAMEREVKANFSEFQDWLEKNA-NYEAIVDGANIGLY 329
L +D E +F + VA ER+ + + F WLE + + A++DG N+
Sbjct: 663 LPTGGLDGRERAQFRERLLDVANATSERD-RRELAAFGAWLEDHPYAFTAVLDGPNVAYL 721
Query: 330 QQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRN---------- 379
QNF G F V QL AV L E +G+ LV+L K ++ N S R
Sbjct: 722 NQNFEHGKFRVRQLQAVAGHL-EAAGHVV-LVVLPAKYCEAVVPNHSKRRPRAAARDEPG 779
Query: 380 -------------LVEEWNEKGVLYMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIF 425
++ W E+G LY+ P G +DD YW+ A V + + L V+ND+ RDH
Sbjct: 780 GTPLQELEDSELAAIKAWAERGALYVVPRGCHDDLYWMLATVSRDQPLAVSNDKTRDHWP 839
Query: 426 ELLGSNFFLKWKER 439
+L+G + +W R
Sbjct: 840 KLIGEAQYRRWATR 853
>gi|397615121|gb|EJK63235.1| hypothetical protein THAOC_16122 [Thalassiosira oceanica]
Length = 703
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 87/153 (56%), Gaps = 22/153 (14%)
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVP--QLDAVVKKLYERSGNKWPLVILH 364
F+ ++E++ Y A+VDGAN+G + +NF V Q+D +++ + E+ ++ ++ LH
Sbjct: 476 FETFIERHPPYGAVVDGANVGYFDKNFHGSPKHVDYRQIDWLLRHMLEQEPHRHVIMFLH 535
Query: 365 NK----RLRSLWENPSHRNLVEEWNEKG------VLYMTPHGSNDDWYWLYAAV------ 408
+ +L W P +++ W+ +Y TP G NDDWYW++AA+
Sbjct: 536 ERHFSSKLAPGWAFP----IIDAWDSDRAPYSHLTVYRTPAGMNDDWYWMHAALINGGKA 591
Query: 409 KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
+ L VTNDEMRDH F++L FL+WKERHQ
Sbjct: 592 DKQVLAVTNDEMRDHHFQMLAHGSFLRWKERHQ 624
>gi|224011972|ref|XP_002294639.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969659|gb|EED87999.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 845
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 24/156 (15%)
Query: 306 EFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSV--PQLDAVVKKLYERSGNKWPLVI- 362
+F+ ++E++ +++ ++DGAN+G YQQNF V Q+D +++ + E + ++ +++
Sbjct: 620 KFEGFIERHPSFDVVIDGANVGYYQQNFGNAPKHVDYKQIDGLLRHVLEGNSHEHHVILF 679
Query: 363 LHNK----RLRSLWENPSHRNLVEEWNE------KGVLYMTPHGSNDDWYWLYAAV---- 408
LH + RL W P ++ +W+ + +Y TP G +DDWYW++AA+
Sbjct: 680 LHERHFAERLVPSWAWP----IIRDWDSDKSPYNRLTVYRTPVGMDDDWYWMHAALMNGG 735
Query: 409 ---KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
L ++NDEMRDH F++L FL+WKERHQ
Sbjct: 736 KKDAPPVLTISNDEMRDHHFQMLAHGSFLRWKERHQ 771
>gi|299116676|emb|CBN74821.1| multidrug resistance pump, putative [Ectocarpus siliculosus]
Length = 1071
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 183/438 (41%), Gaps = 94/438 (21%)
Query: 86 FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALF 145
RV +M ++ E + + R S + AF LIK M N+ V PRLR Y+P +
Sbjct: 296 MRVVMEMKERGMVIEENTYVPLIRGMVSHGNCHDAFDLIKDMVNQ-GVQPRLRCYEPVIA 354
Query: 146 CFCENLEAEKAYEVEEHMGLMG-LSLEQQEIAAL--LKVSAE---TGRVEKVYQYLQKLR 199
C + A EV EHM G + E+Q + L L V+ E R K+ + L ++
Sbjct: 355 EMCREGGMDAAREVWEHMEQQGVIPREEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMS 414
Query: 200 STVRCVNEETGKIIEDWFSGQK--------VNGVSCDLG---------LVKNAV-----L 237
R + + +E+ F+ +NG + +G VK++V +
Sbjct: 415 YHARNLTMGQVEQLEEHFNAVPLAATPSIPINGDAGAVGDTNAFAITEAVKSSVPLARRV 474
Query: 238 KNGGGWHGL---GWIGQGKWVVKRGSVDESGKCC-SCGDQLACVDIDDAETERFAQSVAA 293
K GG H + W + W ++ + E C +CG L V + D E R +++
Sbjct: 475 KVAGG-HEIDDDSWTRE--WSSRKPTRAERPHSCPACGGALRAVGLTDGERARIRETLFG 531
Query: 294 LA--------------------------------MEREVKANFSEFQDWLEK----NANY 317
LA + + K F DWL Y
Sbjct: 532 LAGLQVKKHARSRHTKMLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTY 591
Query: 318 EAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK---RLRSLWEN 374
A++D AN+ ++ + FS+PQ+D +V+ L E G + PLV++ K R+ L++N
Sbjct: 592 TAVIDSANVAYHKGSAFH--FSLPQVDLMVQAL-EAKGER-PLVLIAEKYIDRVGDLYDN 647
Query: 375 ------------PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAV---KLRCLLVTNDE 419
P ++ +V+ W K LY ++DDWYW+YA V + +++ND
Sbjct: 648 SPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDR 707
Query: 420 MRDHIFELLGSNFFLKWK 437
RDH L + +L+W+
Sbjct: 708 TRDHRMSLAETVPYLRWR 725
>gi|428169526|gb|EKX38459.1| hypothetical protein GUITHDRAFT_115425 [Guillardia theta CCMP2712]
Length = 270
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 85/161 (52%), Gaps = 24/161 (14%)
Query: 299 EVKANFSEFQDWL-EKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK 357
+ + + F DW+ E + + +VDG N+ +QNF G FS Q+D VV KL E G K
Sbjct: 9 QARESILNFLDWMRETSQQFSVVVDGPNVAYSKQNFETGCFSYHQIDIVVNKLRE-EGEK 67
Query: 358 WPLVILHNKRLRSLWENPS----HRN--------------LVEEWNEKGVLYMTPHGSND 399
LV+L K ++ + N + H N +++ WN +G L ++PHGSND
Sbjct: 68 -VLVLLPYKYVQPIIPNHARHQGHLNFSTAQHVVTGDEMEIIDRWNAEGCLKISPHGSND 126
Query: 400 DWYWLYAAV---KLRCLLVTNDEMRDHIFELLGSNFFLKWK 437
DWYW+ + V +VTND+MRDH LL FL+WK
Sbjct: 127 DWYWMLSTVIDEGETVRVVTNDQMRDHRLALLDPRPFLRWK 167
>gi|71745204|ref|XP_827232.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831397|gb|EAN76902.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 566
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 57/231 (24%)
Query: 262 DESGKCCSCGDQLACVD---------IDDAETERFAQSVAA-----------LAMEREVK 301
DE+G CC C ++ D + D ET+ A V + L +E
Sbjct: 258 DETGMCCRCSTRVHTFDFAPDDRVTLLRDIETKLIAPRVESGSHYEPGKVVELTERKERW 317
Query: 302 ANFSEFQDWLEKNANYEAIVDGANIGLYQ-QNFTEGG----------------------- 337
F+ F+D L + +Y+A++DGAN+G Y N+ G
Sbjct: 318 EEFAVFKDTLSR-LDYDAVIDGANVGYYGLSNWYRGAKEALLRSRGVDPSTLPEYELCEI 376
Query: 338 ---FSVPQLDAVVKKLYERSGN--KWPLVILHNKRLRSLWENPSHRNLV--EEWNEKGVL 390
VP +++ ++ + K +V+LH++ +RS PS NLV E+W ++ L
Sbjct: 377 PLPVDVPPKFSLIDEMLTEAQKLRKKSVVMLHSRHVRS----PSKENLVWLEKWGQESSL 432
Query: 391 YMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERH 440
+ P NDD+ WL+AA+ + CL+V+ND+MRDH F LL FL+W++RH
Sbjct: 433 IVCPGFLNDDYCWLFAAIHRPNCLVVSNDQMRDHHFSLLSRRSFLRWRQRH 483
>gi|303287330|ref|XP_003062954.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455590|gb|EEH52893.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 726
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Query: 350 LYERSGNKWPLVILHNKRLRSLWENPSHRN--LVEEWNEKGVLYMTPHGSNDDWYWLYAA 407
L R G+ P+ LH +R++ N HR+ +V+ W G L+ TP GSNDDWYWLYAA
Sbjct: 570 LATRPGSAVPVNFLHVRRVKGGPAN-HHRSKQIVDRWKRAGELFTTPAGSNDDWYWLYAA 628
Query: 408 VKL--RCLLVTNDEMRDHIFELLGS-NFFLKWKERHQT 442
V LV+NDEMRDH+F++L S F +WKERHQ
Sbjct: 629 VASGDDAFLVSNDEMRDHVFQMLPSPKLFARWKERHQA 666
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 273 QLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQN 332
QL +++ + + LA ERE NF F WL + +VDGAN+G+Y QN
Sbjct: 413 QLVAMNLSAEDRASLLAGIGKLAREREAGGNFDGFVGWLRRRGPLPFLVDGANVGMYNQN 472
Query: 333 FTEGGFSVPQLDAVV 347
F+E F+ Q++ V+
Sbjct: 473 FSESRFNFQQVEKVM 487
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VFD M ++ E S T++AR+ A+ D + AF L + +E + P+LRT+ PAL F
Sbjct: 212 VFDHMAKKDIPRTEMSYTALARVRAACGDAEGAFELANTVESEPRLAPKLRTFAPALHAF 271
Query: 148 C 148
Sbjct: 272 A 272
>gi|261331446|emb|CBH14440.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 566
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 57/231 (24%)
Query: 262 DESGKCCSCGDQLACVD---------IDDAETERFAQSVAALA----------MEREVK- 301
DE+G CC C ++ D + D ET+ A V + + ER+ +
Sbjct: 258 DETGMCCRCSTRVHTFDFAPDDRVTLLRDIETKLIAPRVESGSHYEPGKVVEPTERKERW 317
Query: 302 ANFSEFQDWLEKNANYEAIVDGANIGLYQ-QNFTEGG----------------------- 337
F+ F+D L + +Y+A++DGAN+G Y N+ G
Sbjct: 318 EEFAVFKDTLSR-LDYDAVIDGANVGYYGLSNWYRGAKEALLRSRGVDPSTLPEYELCEI 376
Query: 338 ---FSVPQLDAVVKKLYERSGN--KWPLVILHNKRLRSLWENPSHRNLV--EEWNEKGVL 390
VP +++ ++ + K +V+LH++ +RS PS NLV E+W ++ L
Sbjct: 377 PLPVDVPPKFSLIDEMLTEAQKLRKKSVVMLHSRHVRS----PSKENLVWLEKWRQESSL 432
Query: 391 YMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERH 440
+ P NDD+ WL+AA+ + CL+V+ND+MRDH F LL FL+W++RH
Sbjct: 433 IVCPGFLNDDYCWLFAAIHRPNCLVVSNDQMRDHHFSLLSRRSFLRWRQRH 483
>gi|299470328|emb|CBN78378.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 723
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 173/494 (35%), Gaps = 115/494 (23%)
Query: 9 PSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLC 68
P P K++K F + + K+ D A+ LY A +S FNA+L
Sbjct: 26 PQSPRKRQKA-------FSTMVVNSVKAGDADRALLLYGKAAEVGCMISETVFNAVL--- 75
Query: 69 SDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMN 128
++ +G RV M+ + P E + R AAS+ + AF ++ M
Sbjct: 76 ------------SVSNGVRVLSDMVEAGIKPRENHYAFLLREAASRGAFEEAFSQVREMV 123
Query: 129 NEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
+ V PRLRTY P L C + A EV HM G+ +E ++K A G +
Sbjct: 124 D-GGVRPRLRTYSPLLKGLCHKPDMTLASEVWSHMTAHGVQPTPEEHIDMIKGWAAAGEL 182
Query: 189 EKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGL-- 246
S RC+ + G E SCD + ++ G G H L
Sbjct: 183 RPRVAD----GSVERCLQQLAGMDFELIPCRDAGAAASCDDHVSGSSA---GSGDHHLQT 235
Query: 247 ---GWIGQGKWVVKRGSVD------------------ESGKCCSCGDQLACVDIDDAETE 285
+ +V V G C CG L V +D
Sbjct: 236 LLSAFNADSNFVSSESDVQTYFSSPPRVASVSSASLASGGVCDCCGAALKVVGLDPEARA 295
Query: 286 RFAQSVAALAMER-----------------------------------------EVKANF 304
R ++ LA E E +
Sbjct: 296 RVRSALVKLASETAYPTPPPPPALPLPPKRRQSSRLDYAYAGEGQGEMDRRGLGEAMGDL 355
Query: 305 SEFQDWLEK----NANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPL 360
F WLE+ ++ +VDG N+ Y QN G F + Q+D + ++L ER G + L
Sbjct: 356 ERFAAWLEERRREGVHFTTVVDGCNVAYYGQNKEGGKFEISQVDLMARQL-ERDGERV-L 413
Query: 361 VILHNKRLRSL---------WENPSHR------NLVEEWNEKGVLYMTPHGSNDDWYWLY 405
VIL + LR +NPS ++ W + +LY +G++DD +W+Y
Sbjct: 414 VILPERYLRPCVPNSARSRRGKNPSSALSDEDLETIDRWRRRQMLYSCANGTDDDLFWMY 473
Query: 406 AAVKLRCLLVTNDE 419
V + +E
Sbjct: 474 FTVSSDATAIEGEE 487
>gi|340056237|emb|CCC50567.1| conserved hypothetical protein, fragment [Trypanosoma vivax Y486]
Length = 562
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 47/221 (21%)
Query: 263 ESGKCCSCGDQLACVD---------IDDAETERF------------AQSVAALAMEREVK 301
+ G C CG L D ++D ET+ A V+++ +ER V
Sbjct: 259 DKGMCDRCGTALYSFDFSPGDRETLLNDIETKLIEPRLGSPGSCESASKVSSVEIERRV- 317
Query: 302 ANFSEFQDWLEKNANYEAIVDGANIGLY-----QQNFTEGGFSVPQLDAVVKKLYE---- 352
F +F++ L Y+A++DGAN+G Y + E S +D +E
Sbjct: 318 GEFQKFKE-LISILEYDAVIDGANVGYYGLSSWYRAAKEALLSSRGVDPTKVSEHELCEV 376
Query: 353 ----RSGNKWPLV---ILHNKRLRS---LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWY 402
K+PL+ + H +RLRS + + HRNL+ E + L + P NDD+
Sbjct: 377 PVPVDVPPKFPLIDEMLTHARRLRSKSLVMLHRRHRNLLLESS----LVVCPGFLNDDYC 432
Query: 403 WLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
WLYAA+ K CL+V+ND+MRDH F LL FL+W++RH+
Sbjct: 433 WLYAAIRKPNCLVVSNDQMRDHHFSLLSRRSFLRWRQRHRV 473
>gi|407408445|gb|EKF31883.1| hypothetical protein MOQ_004281 [Trypanosoma cruzi marinkellei]
Length = 571
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 55/232 (23%)
Query: 262 DESGKCCSCGDQLACVD---------IDDAETERFAQSVAA--------LAMEREVKANF 304
D++G+C CG +L D + D ET+ A V + E +
Sbjct: 258 DKTGECSRCGTKLKSFDFTSIDRATLLSDIETKLIAPRVGGENHYEPEKIVTPAEKDRRW 317
Query: 305 SEFQDWLEK--NANYEAIVDGANIGLY-------------------------QQNFTEGG 337
EF+ + E N +Y+A++DGAN+G Y + E
Sbjct: 318 REFEAFKETLANCDYDAVIDGANVGYYGLSSWYREAKEACLRARGVDPATVPEYQLCEVP 377
Query: 338 FSV---PQLDAVVKKLYE-RSGNKWPLVILHNKRLRSLWENPSHRN--LVEEWNEKGVLY 391
V P+ + + L + R + PLV+LH + + E+PS + + +W L
Sbjct: 378 LPVDVPPKFSLIDEMLAQTRCIGRKPLVMLHKRHV----ESPSKESSEWLLKWKADSALI 433
Query: 392 MTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
P NDD+ WLYAA+ K CL V+ND MRDH F LL FL+W++RH+
Sbjct: 434 ACPGFMNDDYCWLYAAICKPNCLFVSNDLMRDHHFMLLSRRSFLRWRQRHRV 485
>gi|219122328|ref|XP_002181499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406775|gb|EEC46713.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 828
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 53/238 (22%)
Query: 250 GQGKWVVKRGSVDES-GKCCSCGDQLACVDIDDAETERFAQSVAALA------------M 296
G+ ++ R +D+S G C G +L + ++ + + F Q++ +A
Sbjct: 521 GEDDFIASRVHIDQSSGHCPVSGVKLRLMSLEPEQAKAFKQNILDMATSEQDRYELKSKQ 580
Query: 297 EREVKANF--SEFQDWLEKNAN--YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYE 352
+R +++F +EF WL+ A + AI+DG NIG Y QNF G FS QL VV L
Sbjct: 581 KRAQRSDFILNEFMKWLDTRAGDPFTAILDGPNIGYYMQNFEGGRFSYHQLKFVVDSL-- 638
Query: 353 RSGNKWPLVILH----NKRLRSLWENPSHRNLVEEWN------EKGVLYMTPHGSNDDWY 402
S N+ PLVIL N R+ EE + G +Y+ P G DD++
Sbjct: 639 ESMNEKPLVILPRKYANDRIHLTIGGVMQTLKKEELQIRNYLIKTGRVYLVPPGHLDDYF 698
Query: 403 WLYAAVKL------------------------RCLLVTNDEMRDHIFELLGSNFFLKW 436
W+ +++ R +L++ND+MRDH +LL F +W
Sbjct: 699 WMLSSLSTQTTARNGRDLSVLPGDPGGRWPGARPMLISNDQMRDHKLDLLEPKLFRRW 756
>gi|146102307|ref|XP_001469331.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073700|emb|CAM72437.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 584
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 53/233 (22%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM-----------------EREVK 301
V + G C +CG QL D+ + + + E V
Sbjct: 271 APVSDDGVCSNCGAQLQSFDLSAEDRAVLVHDLVEKLVKPRLQGSSRYEPDTEVSEETVC 330
Query: 302 ANFSEFQDWLEKNA--NYEAIVDGANIGLYQQN--FTEGG-------------------F 338
+ EF+++ A +Y+ ++DGAN+G Y N +TE F
Sbjct: 331 QRWREFEEFKAAAAKMSYDTVIDGANVGYYGLNSWYTEAKDALLRSRGIDPSSVPSADRF 390
Query: 339 SVPQLDAVVKKL---------YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGV 389
SVP V K ERSG K +++LHN+ L P + W + G
Sbjct: 391 SVPFPVDVAPKFSLIEDMRTAAERSGKK-AVIVLHNRHLAH--PTPENATYAARWRDMGA 447
Query: 390 LYMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
L +P NDD+ WLYA + + +++ND+MRDH F +L FF++W++RH+
Sbjct: 448 LLPSPAFLNDDYCWLYAVLTRQDSCIISNDQMRDHYFTVLQPRFFVRWRQRHR 500
>gi|342185400|emb|CCC94883.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 582
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 193/499 (38%), Gaps = 98/499 (19%)
Query: 2 SNTTSTNPSKPNKK-RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHH 60
S T P + K R + P + + D+ A+ + + S+++ S+
Sbjct: 33 SATPVATPLRTGVKWRLRSSAPVEDLQRRVGQLVGMGDVDEAVKVIRAGLSRSV-FSMKA 91
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP--NEASVTSVA-RLAASKNDG 117
L+LC + + + + + +Q+ + ++ ++ SV +VA RL + D
Sbjct: 92 LANTLFLCERTKREALATE--------LIEQVHMSGLVQSWDDESVLAVALRLRCTAGDA 143
Query: 118 DYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAA 177
A + + + + RLR+ L C + + A+ V + G+ L ++ A
Sbjct: 144 KGAMQIFSYIVSHKFL--RLRSVSAFLHLCCTRRDRQMAFAVYDEALRQGIELRVEDYHA 201
Query: 178 LLKVSAETGR-VEKVYQYLQKLRSTVRCVNEE-TGKIIEDWFSGQKVNGVSCDLGLVKNA 235
L ++ + G + +++ L++++ + V+E ++I W + + V D+ N
Sbjct: 202 LGRLCVDVGEPISTLHRLLREMQGHMDSVSETMVEEVIRPWATRGGLRVV--DVTFPNN- 258
Query: 236 VLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALA 295
+ +G CC+C L+ + V +A
Sbjct: 259 -----------------------DTTLSAGMCCNCSRNLSGHRFTAVQKSSLIGDVVKVA 295
Query: 296 M---EREVKANFSEFQDWLEKNANY----EAIVDGANIGLY------------------- 329
++ + F+ W + Y + ++DGAN+G Y
Sbjct: 296 TSSGRKDSARAWVAFEAWRRFVSAYGSRIDVLIDGANLGYYGLSSWYSIAKRELLMKRGR 355
Query: 330 -------------QQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ F + S + V + R PLVILH++
Sbjct: 356 RAGEIQPQELELSKRGFVDVSVSFELIGLAVNEARRRGLR--PLVILHSRHCEPKNMTAE 413
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--------------RCLLVTNDEMRD 422
LV EW GVLY TP+G NDD WLYAA++L ++TND MRD
Sbjct: 414 SEALVAEWRRDGVLYCTPNGLNDDLCWLYAALELTTPTDAAAAAGAAKTVWVLTNDLMRD 473
Query: 423 HIFELLGSNFFLKWKERHQ 441
H F+LL +F++W++RH+
Sbjct: 474 HHFKLLSPRYFVRWRDRHR 492
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 30/102 (29%)
Query: 300 VKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWP 359
+ A+F+ ++WLE N +Y AIVDGANI LYQ NF EGGFS+ Q
Sbjct: 686 MHAHFA--KEWLEANKDYRAIVDGANIALYQPNFAEGGFSLTQ----------------- 726
Query: 360 LVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDW 401
L ENPS+R+L+E W G LY +P GSNDDW
Sbjct: 727 -----------LMENPSNRHLIETWRTNGALYTSPSGSNDDW 757
>gi|507273|gb|AAA29271.1| ORFA [Leishmania infantum]
Length = 584
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 55/234 (23%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN--------------- 303
V + G C +CG QL D+ + + ++ ++ +
Sbjct: 271 APVTDDGVCSNCGAQLQSFDLSAEDRAVLVHDLVEKLVKPRLQGSSRYEPDTEVSEDTVC 330
Query: 304 -----FSEFQDWLEKNANYEAIVDGANIGLYQQN--FTEGG------------------- 337
F EF+ K +Y+ ++DGAN+G Y N +TE
Sbjct: 331 QRWREFEEFKAAAAK-MSYDTVIDGANVGYYGLNSWYTEAKDALLRSRGIDPSSVPSADR 389
Query: 338 FSVPQLDAVVKKL---------YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKG 388
FSVP V K ERSG K +++LHN+ L P + W + G
Sbjct: 390 FSVPFPVDVAPKFSLIEDMRTAAERSGKK-AVIVLHNRHLAH--PTPENATYAARWRDMG 446
Query: 389 VLYMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
L +P NDD+ WLYA + + +++ND+MRDH F +L FF++W++RH+
Sbjct: 447 ALLPSPAFLNDDYCWLYAVLTRQDSCIISNDQMRDHYFTVLQPRFFVRWRQRHR 500
>gi|398021737|ref|XP_003864031.1| hypothetical protein, conserved [Leishmania donovani]
gi|322502265|emb|CBZ37349.1| hypothetical protein, conserved [Leishmania donovani]
Length = 694
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 174/470 (37%), Gaps = 92/470 (19%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
F A L+ C ++ D +S S + R +S + E ++ + RL D D A
Sbjct: 63 FAAALFAC-EATGDAASGLSLVAEARRCSSSGISTEWLQTEHVLSVILRLQCVAGDRDGA 121
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK-AYEVEEHMGLMGLSLEQQEIAALL 179
++ + E + + RLR+ L C L+ + A+ V E + L + + AL
Sbjct: 122 TRMLAYL--EQHGLLRLRSVSAFLQYCCSGLKDRRLAFAVYEAALKHKIELTEPDYLALG 179
Query: 180 KVSAETGR-VEKVYQYLQKLRSTVRCVNEETGK-IIEDWFS--------GQKVNGVSCDL 229
++ + V ++ LQ++R V V+E + ++E W G K GV L
Sbjct: 180 RLCVQVREPVGTLFFMLQEMREHVAEVSEAMVRDVLEPWVMMANEDAAVGLKPRGVPMSL 239
Query: 230 GL-------------VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLAC 276
L V + G G G G C +C +L+
Sbjct: 240 QLHRVDEMHHVPQLLVASPPPSTGASARGAASPGDSAATAPPSDTQLCGICPACQAELSG 299
Query: 277 VDIDDAETERFAQSVAALAMEREVKANFS--EFQDW-------LEKNANYEAIVDGANIG 327
A + + L + + ++ + F+ W L+ + +DGAN+G
Sbjct: 300 YPFTAACRSHLLRELKELIIPQACRSRRALLGFEHWKRYIHARLDAGDRVDIFIDGANLG 359
Query: 328 LY--------------------------------QQNFTEG-----GFSVPQLDAVVKKL 350
Y Q T G G + +DA VK
Sbjct: 360 YYGLSSWYDLAKKQLMLHCGVPESRITDNDLDFNAQCKTSGRGVDVGVNFELIDAAVKLA 419
Query: 351 YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
+ + PLV+LH + + + +V+ W ++G LY +P G NDD WLY A+ L
Sbjct: 420 VDTYRMRSPLVMLHERHVEPKFMTLQSTAIVQRWKDRGWLYCSPTGLNDDLCWLYGALLL 479
Query: 411 -------------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
R + TND+MRDH F LL F +W++RH+
Sbjct: 480 TDPTDTTPTSVTAASASPHRTFVCTNDKMRDHHFRLLSPRAFTRWRDRHR 529
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 30/102 (29%)
Query: 300 VKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWP 359
+ A+F+ ++WLE N +Y AIVDGANI LYQ NF EGGFS+ Q
Sbjct: 686 MHAHFA--KEWLEANKDYRAIVDGANIALYQPNFAEGGFSLTQ----------------- 726
Query: 360 LVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDW 401
L ENPS+R+L+E W G LY +P GSNDDW
Sbjct: 727 -----------LMENPSNRHLIETWRTNGALYTSPSGSNDDW 757
>gi|146097964|ref|XP_001468276.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072643|emb|CAM71359.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 694
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 174/470 (37%), Gaps = 92/470 (19%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
F A L+ C ++ D +S S + R +S + E ++ + RL D D A
Sbjct: 63 FAAALFAC-EATGDAASGLSLVAEARRCSSSGISTEWLQTEHVLSVILRLQCVAGDRDGA 121
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK-AYEVEEHMGLMGLSLEQQEIAALL 179
++ + E + + RLR+ L C L+ + A+ V E + L + + AL
Sbjct: 122 TRMLAYL--EQHGLLRLRSVSAFLQYCCSGLKDRRLAFAVYEAALKHKIELTEPDYLALG 179
Query: 180 KVSAETGR-VEKVYQYLQKLRSTVRCVNEETGK-IIEDWFS--------GQKVNGVSCDL 229
++ + V ++ LQ++R V V+E + ++E W G K GV L
Sbjct: 180 RLCVQVREPVGTLFFMLQEMREHVAEVSEAMVRDVLEPWVMMANEDAAVGLKPRGVPMSL 239
Query: 230 GL-------------VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLAC 276
L V + G G G G C +C +L+
Sbjct: 240 QLHRVDEMHHVPQLLVASPPPSTGASARGAASPGDSAATAPPSDTQLCGICPACQAELSG 299
Query: 277 VDIDDAETERFAQSVAALAMEREVKANFS--EFQDW-------LEKNANYEAIVDGANIG 327
A + + L + + ++ + F+ W L+ + +DGAN+G
Sbjct: 300 YPFTAACRSHLLRELKELIIPQACRSRRALLGFEHWKRYIHARLDAGDRVDIFIDGANLG 359
Query: 328 LY--------------------------------QQNFTEG-----GFSVPQLDAVVKKL 350
Y Q T G G + +DA VK
Sbjct: 360 YYGLSSWYDLAKKQLMLHCGVPESRITDSDLDFNAQCKTSGRGVDVGVNFELIDAAVKLA 419
Query: 351 YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
+ + PLV+LH + + + +V+ W ++G LY +P G NDD WLY A+ L
Sbjct: 420 VDTYRMRSPLVMLHERHVEPKFMTLQSTAIVQRWKDRGWLYCSPTGLNDDLCWLYGALLL 479
Query: 411 -------------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
R + TND+MRDH F LL F +W++RH+
Sbjct: 480 TDPTDTTPTSVTAASASPHRTFVCTNDKMRDHHFRLLSPRAFTRWRDRHR 529
>gi|407847678|gb|EKG03306.1| hypothetical protein TCSYLVIO_005652 [Trypanosoma cruzi]
Length = 571
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 262 DESGKCCSCGDQLACVD---------IDDAETERFAQSVAA--------LAMEREVKANF 304
D++G+C CG +L D + D ET+ A V + E +
Sbjct: 258 DKTGECSRCGTKLFSFDFTSIDRATLLSDIETKLIAPRVGGENHYEPERIVTPAEKDRRW 317
Query: 305 SEFQDWLE--KNANYEAIVDGANIGLY-------------------------QQNFTEGG 337
EF+ + E N +Y+ ++DGAN+G Y + E
Sbjct: 318 REFEAFKEALTNCDYDVVIDGANVGYYGLSSWYREAKELCLRARGVDPTTVPEYQLCEVP 377
Query: 338 FSV---PQLDAVVKKLYE-RSGNKWPLVILHNKRLRSLWENPSHRN--LVEEWNEKGVLY 391
V P+ + + L + R + PLV+LH + + E+PS + + +W L
Sbjct: 378 LPVDVPPKFSLIDEMLAQTRCVGRKPLVMLHKRHV----ESPSKESSEWLLKWKADSALI 433
Query: 392 MTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
P NDD+ WLYAA+ K CL V+ND MRDH F LL FL+W++RH+
Sbjct: 434 ACPGFMNDDYCWLYAAICKPDCLFVSNDLMRDHHFMLLSRRSFLRWRQRHRV 485
>gi|71754937|ref|XP_828383.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833769|gb|EAN79271.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 571
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 55/231 (23%)
Query: 264 SGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN- 316
+G CCSC L+ + + V +AM+ + F ++ ++ + +
Sbjct: 244 AGTCCSCSSVLSGHRFTALQKSKLLSDVVQIAMDGGRKNSPRARMAFETWRRFISSHGHS 303
Query: 317 YEAIVDGANIGLY--------------------------------QQNFTEGGFSVPQLD 344
+ +VDGAN+G Y ++ F + + ++
Sbjct: 304 IDVLVDGANLGYYGLSSWYALAKRELLLRRGRKESDIAPQDVAWSKRRFVDVSVNFELIE 363
Query: 345 AVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWL 404
V++ Y R PLV+LH + + LV W +GVLY TP G NDD WL
Sbjct: 364 LAVQEAYRRGMQ--PLVLLHERHCEPNNVTDVGKALVSRWRREGVLYCTPSGLNDDLCWL 421
Query: 405 YAAVKL--------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
YAA++L L++TND MRDH F LL F +W++RH+
Sbjct: 422 YAALELTTPTDAVPREEKGKTVLVLTNDLMRDHHFRLLSPRHFSRWRDRHR 472
>gi|71659584|ref|XP_821513.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70886895|gb|EAN99662.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 571
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 55/232 (23%)
Query: 262 DESGKCCSCGDQLACVD---------IDDAETERFAQSVAA--------LAMEREVKANF 304
D++G+C CG +L D + D ET+ A V + E +
Sbjct: 258 DKTGECSRCGTKLFSFDFTSIDRATLLSDIETKLIAPRVGGENHYEPERIVTPAEKDRRW 317
Query: 305 SEFQDWLEK--NANYEAIVDGANIGLY-------------------------QQNFTEGG 337
EF+ + E N +Y+ ++DGAN+G Y + E
Sbjct: 318 REFEAFKETLTNCDYDVVIDGANVGYYGLSSWYREAKELCLRARGVDPTTVPEYQLCEVP 377
Query: 338 FSV---PQLDAVVKKLYE-RSGNKWPLVILHNKRLRSLWENPSHRN--LVEEWNEKGVLY 391
V P+ + + L + R + PLV+LH + + E+PS + + +W L
Sbjct: 378 LPVDVPPKFSLIDEMLAQTRCVGRKPLVMLHKRHV----ESPSKESSEWLLKWKADSALI 433
Query: 392 MTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
P NDD+ WLYAA+ K CL V+ND MRDH F LL FL+W++RH+
Sbjct: 434 ACPGFMNDDYCWLYAAICKPDCLFVSNDLMRDHHFMLLSRRSFLRWRQRHRV 485
>gi|507272|gb|AAA29270.1| ORF13 [Leishmania infantum]
Length = 858
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 98/233 (42%), Gaps = 53/233 (22%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAE--------TERFAQSVAALAMEREVKANFSE---F 307
V + G C +CG QL D+ + E+ + + E SE
Sbjct: 545 APVTDDGVCSNCGAQLQSFDLSAEDRAVLVHDLVEKLVKPRLQGSSRYEPDTEVSEDTVC 604
Query: 308 QDWLE--------KNANYEAIVDGANIGLYQQN--FTEGG-------------------F 338
Q W E +Y+ ++DGAN+G Y N +TE F
Sbjct: 605 QRWREFEEFKAAAAKMSYDTVIDGANVGYYGLNSWYTEAKDALLRSRGIDPSSVPSADRF 664
Query: 339 SVPQLDAVVKKL---------YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGV 389
SVP V K ERSG K +++LHN+ L P + W + G
Sbjct: 665 SVPFPVDVAPKFSLIEDMRTAAERSGKK-AVIVLHNRHLAH--PTPENATYAARWRDMGA 721
Query: 390 LYMTPHGSNDDWYWLYAAVKLR-CLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
L +P NDD+ WLYA + + +++ND+MRDH F +L FF++W++RH+
Sbjct: 722 LLPSPAFLNDDYCWLYAVLTRQDSCIISNDQMRDHYFTVLQPRFFVRWRQRHR 774
>gi|261334222|emb|CBH17216.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 571
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 55/231 (23%)
Query: 264 SGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN- 316
+G CCSC L+ + + V +AM+ + F ++ ++ + +
Sbjct: 244 AGTCCSCSRVLSGHRFTALQKRKLLSDVVQIAMDGGRKNSPRARMAFETWRRFISSHGHS 303
Query: 317 YEAIVDGANIGLY--------------------------------QQNFTEGGFSVPQLD 344
+ +VDGAN+G Y ++ F + + ++
Sbjct: 304 IDVLVDGANLGYYGLSSWYALAKRELLLRRGRKESDIGPQDVAWSKRRFVDVSVNFELIE 363
Query: 345 AVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWL 404
V++ Y R PLV+LH + + LV W +GVLY TP G NDD WL
Sbjct: 364 LAVQEAYRRGMQ--PLVLLHERHCEPNNVTDVGKALVSRWRREGVLYCTPSGLNDDLCWL 421
Query: 405 YAAVKL--------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
YAA++L L++TND MRDH F LL F +W++RH+
Sbjct: 422 YAALELTTPTDAVPREEKGKTVLVLTNDLMRDHHFRLLSPRHFSRWRDRHR 472
>gi|342183454|emb|CCC92934.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 565
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 56/230 (24%)
Query: 262 DESGKCCSCGDQLACVDIDDAETERF------------AQSVAALAMEREVKA-----NF 304
+++GKC CG L D+D+ E Q + ME V+ +
Sbjct: 303 EKTGKCGRCGAHLNTFDLDEEERAALLGDIETKLVVPHVQDCSPYDMEEAVEPMEKGHRW 362
Query: 305 SEFQDWLEKNA--NYEAIVDGANIGLY-------------------------QQNFTEGG 337
EF+D+ E + +Y+ ++DGAN+G Y + + E
Sbjct: 363 KEFEDFKEVLSLLDYDGVIDGANVGYYGLSSWYSEAKKKMLQASGADLSTVPEYDLCEVP 422
Query: 338 FSV---PQLDAVVKKLYE-RSGNKWPLVILHNKRLRSLWENPSHRNL--VEEWNEKGVLY 391
F V P+ V L E R K +++LH++ +S P NL + +W + L
Sbjct: 423 FPVDVPPKFSLVDDMLREARRLRKNSVIMLHSRHFKS----PPEENLPWIAKWKREKALV 478
Query: 392 MTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERH 440
+ P NDD+ WL+AAV + CL+ +ND+MRDH F L G + FL+W++RH
Sbjct: 479 VCPGFLNDDYCWLFAAVYRPNCLVFSNDQMRDHHFTLSGRS-FLRWRQRH 527
>gi|154345319|ref|XP_001568601.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065938|emb|CAM43720.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 581
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 61/237 (25%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEF----------- 307
V E G C CG QL D+ + + +E+ VK F
Sbjct: 268 SPVSEEGVCSHCGAQLQSFDLSPEDRAALVHDL----VEKLVKPRLQGFSRYEPDTEVSE 323
Query: 308 ----QDWLE--------KNANYEAIVDGANIGLYQQN--FTEGG---------------- 337
Q W E + +Y+ ++DGAN+G Y + + E
Sbjct: 324 DIIGQRWREFEEFKAAAETMSYDTVIDGANVGYYGLSSWYAEAKDSLLRSRGVDPSSVPS 383
Query: 338 ---FSVPQLDAVVKKL---------YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWN 385
F+VP V K ER+G K +++LHN+ L L P + + W
Sbjct: 384 SERFNVPFPVDVAPKFSLIEDMRIAAERNGKK-TVIVLHNRHLAQL--TPENATYAQRWR 440
Query: 386 EKGVLYMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
+ L +P NDD+ WLYA + + +++ND+MRDH F +L FFL+W++RH+
Sbjct: 441 DMSALLPSPPFLNDDYCWLYAVLTRQDSCIISNDQMRDHYFRVLQPRFFLRWRQRHR 497
>gi|157875101|ref|XP_001685956.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129029|emb|CAJ06509.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 694
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 176/470 (37%), Gaps = 92/470 (19%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
F A L+ C ++ D +S S + R +S + E ++ + RL D D A
Sbjct: 63 FAAALFAC-EANGDAASGLSLVAEVRRCSTSGISTEWLQTEHVLSVILRLQCVAGDRDGA 121
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK-AYEVEEHMGLMGLSLEQQEIAALL 179
++ + E + + RLR+ L C L+ + A+ V E + L + + AL
Sbjct: 122 TRMLAYL--EQHGLLRLRSVSTFLQYCCSRLKDRRLAFAVYEAALKHKIELTEPDYLALG 179
Query: 180 KVSAETGR-VEKVYQYLQKLRSTVRCVNEETGK-IIEDWFS--------GQKVNGVSCDL 229
++ + V ++ LQ++R V V+E + ++E W G K GV L
Sbjct: 180 RLCVQVREPVGTLFFMLQEMREHVAEVSEAMVRDVLEPWVMMANEDAAVGLKPRGVPMSL 239
Query: 230 GL-------------VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLAC 276
L V + G G R G C +C +L+
Sbjct: 240 QLHRVDEMHHVPQLSVASPPPSASASARGAASPGDSAAAAPRSGAQLCGVCPACQAELSG 299
Query: 277 VDIDDAETERFAQSVAALAMEREVKANFS--EFQDW-------LEKNANYEAIVDGANIG 327
A + + L + + ++ + F+ W L+ + +DGAN+G
Sbjct: 300 YPFTAACRSHLLRELKELIIPQACRSRRALLGFEHWKRYIHARLDAGDRVDIFIDGANLG 359
Query: 328 LY--------------------------------QQNFTEG-----GFSVPQLDAVVKKL 350
Y Q T G G + +DA VK
Sbjct: 360 YYGLSSWYDLAKKQLMLHRGVPESRITDNDLDFGAQCKTSGRSVDVGVNFELIDAAVKLA 419
Query: 351 YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
+ G + PLV+LH + + + + +V+ W ++G LY +P G NDD WLY A+ L
Sbjct: 420 VDTYGMRSPLVMLHERHVEPKFMTSQNTAIVQRWKDRGWLYCSPTGLNDDLCWLYGALLL 479
Query: 411 -------------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
R + TND+MRDH F LL F +W++RH+
Sbjct: 480 TDPTDATPTSVATASASPHRTFVCTNDKMRDHHFRLLSPRAFTRWRDRHR 529
>gi|401430040|ref|XP_003879502.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495752|emb|CBZ31058.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 59/236 (25%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN--------------- 303
SV + G C +CG L D+ + + ++ ++ +
Sbjct: 271 ASVSDDGVCSNCGAPLQSFDLSAEDRAVLVHDLVEKLVKPRLQGSSRYEPDTEVSEDIVC 330
Query: 304 -----FSEFQDWLEKNANYEAIVDGANIGLYQQN--FTEGG------------------- 337
F EF+ K +Y+ ++DGAN+G Y N +TE
Sbjct: 331 QRWREFEEFKAAAAK-MSYDTVIDGANVGYYGLNSWYTEAKDALLRSRGIDPSSVPSADR 389
Query: 338 FSVPQLDAVVKKL---------YERSGNKWPLVILHNKRLRSLWENPSHRN--LVEEWNE 386
FSVP V K ERSG K +++LHN+ L E+P+ N W +
Sbjct: 390 FSVPFPVDVAPKFSLIEDMRTTAERSGKK-AVIVLHNRHL----EHPTPENATFAARWRD 444
Query: 387 KGVLYMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
L +P NDD+ WLYA + + +++ND+MRDH F +L FF++W++RH+
Sbjct: 445 MDALLPSPAFLNDDYCWLYAVLMRQDSCIISNDQMRDHYFTVLQPRFFVRWRQRHR 500
>gi|389595359|ref|XP_003722902.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|323364130|emb|CBZ13137.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 584
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 98/234 (41%), Gaps = 55/234 (23%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAE--------TERFA----QSVAALAMEREVKAN--- 303
V + G C +CG QL D+ E+ Q + + EV +
Sbjct: 271 APVSDDGVCSNCGAQLQSFDLSPENRAVLVHDLVEKLVKPRLQGCSRYEPDTEVSEDTVC 330
Query: 304 -----FSEFQDWLEKNANYEAIVDGANIGLYQQN--FTEGG------------------- 337
F EF+ K +Y+ ++DGAN+G Y N +TE
Sbjct: 331 QRWREFEEFKAAAAK-MSYDTVIDGANVGYYGLNSWYTEAKDALLRSRGIDPSSVPSADR 389
Query: 338 FSVPQLDAVVKKL---------YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKG 388
FSVP V K ER G K +++LHN+ L P + W G
Sbjct: 390 FSVPFPVDVAPKFSLIEDMRTAAERRGKK-AVIVLHNRHLAQ--PTPENATYAARWRNMG 446
Query: 389 VLYMTPHGSNDDWYWLYAAV-KLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
L +P NDD+ WLYA + + +++ND+MRDH F +L FF++W++RH+
Sbjct: 447 ALLPSPAFLNDDYCWLYAVLTRQDSCIISNDQMRDHYFTVLQPRFFVRWRQRHR 500
>gi|401427932|ref|XP_003878449.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494697|emb|CBZ30000.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 693
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 175/470 (37%), Gaps = 92/470 (19%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
F A L+ C ++ D +S S + R +S + E ++ + RL D D A
Sbjct: 63 FAAALFAC-EATGDAASGLSLVAEVRRCSSSGISTEWLQTEHVLSVILRLQCVAGDRDGA 121
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENL-EAEKAYEVEEHMGLMGLSLEQQEIAALL 179
++ + E + + RLR+ L C L + +A+ E + L +++ AL
Sbjct: 122 TRMLAYL--EHHGLLRLRSVSAFLQYCCSRLKDRRRAFAAYEAALKHKIELSERDYLALG 179
Query: 180 KVSAETGR-VEKVYQYLQKLRSTVRCVNEETGK-IIEDWFS--------GQKVNGVSCDL 229
++ + V ++ LQ++R V V+E + ++E W G K GV L
Sbjct: 180 RLCVQVREPVGTLFFMLQEMREHVAEVSEAMVRDVLEPWVMMANEDAAVGLKPRGVPMSL 239
Query: 230 GL-------------VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLAC 276
L V + G S G C +C +L+
Sbjct: 240 QLHRVDEMHHVPQLSVASPPPSISASARAAASPGDSAAAAPPTSTQLCGVCPACQAELSG 299
Query: 277 VDIDDAETERFAQSVAALAMEREVKANFS--EFQDW-------LEKNANYEAIVDGANIG 327
A + + L + + ++ + F+ W L+ + +DGAN+G
Sbjct: 300 YPFTAACRSHLLRELTELIIPQACRSRRALLGFEHWKRYIHARLDAGYRVDIFIDGANLG 359
Query: 328 LY--------------------------------QQNFTEG-----GFSVPQLDAVVKKL 350
Y Q T G G + +DA VK
Sbjct: 360 YYGLSSWYDLAKKQLMLHRGVPESRITDNDLDFNAQCKTSGRGVDVGVNFELIDAAVKLA 419
Query: 351 YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
+ G + PLV+LH + + + + +++ W ++G LY +P G NDD WLY A+ L
Sbjct: 420 VDTYGMRSPLVMLHERHVEPKFMTLQNTAILQRWKDRGWLYCSPTGLNDDLCWLYGALLL 479
Query: 411 -------------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
R + TND+MRDH F LL F +W++RH+
Sbjct: 480 TDPTDTTPTSVTATSASPHRTFVCTNDKMRDHHFRLLSPRAFTRWRDRHR 529
>gi|428174047|gb|EKX42945.1| hypothetical protein GUITHDRAFT_110991 [Guillardia theta CCMP2712]
Length = 566
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/464 (19%), Positives = 176/464 (37%), Gaps = 86/464 (18%)
Query: 3 NTTSTNPSKPNKKRKTNPN------PETNFLINLQSCTKSKDLTTAISLYESAHSQNLRL 56
+ +S +PN++ K N N F L C ++ D AI + + ++N L
Sbjct: 91 DVSSQAAERPNRREKKNANLSEEDRRRNEFRNKLNCCMRNADFKKAIEIVKDMETENFTL 150
Query: 57 SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQM--------LSNNVIPNEASVTSVA 108
+ + LC+ S D + G ++ D++ L+ + + +
Sbjct: 151 DQQQYAQMFNLCASSGEDD------WKEGEKMLDKLNREMRESKLTETSNDEKNLASGIV 204
Query: 109 RLAASKNDGDYAFVLIKRMNNE--FNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166
+ + A RM E V +RT N + E ++V +
Sbjct: 205 KFCSCTGKHKEALETWTRMVEERVSKGVIMIRTN-------ATNRDMEAMFDVYKDSQTE 257
Query: 167 GLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVS 226
+ L +++ ++K T + +++++ L+ + + + ET + ++ F
Sbjct: 258 DVDLLEEDFLNIIKACVATKKTKRIFEVLEAMMELIYSLQPETLQSLKQVFESM---DRR 314
Query: 227 CDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDID------ 280
C + D G C C L +D+
Sbjct: 315 CKFTHIN----------------------------DPKGFCPECKKNLISLDLTKDMLLA 346
Query: 281 -----DAETERFAQSVAALAMEREVK-ANFSEFQDWLEKNANYEAIVDGANIGLYQQNFT 334
E + + +LA + + A F F+ WL +++ + I+DGAN+G Y
Sbjct: 347 LISWFQDELSQLCDQINSLARVGDAQSAAFDAFKSWLNRSSLPDVIIDGANVGYYSLRPD 406
Query: 335 EG-GFSVPQLDAVVKKLYERSGNKWPLVILHNKRLR--SLWENPSHRNLVEEWNE----K 387
+G S Q+D +V+ ER PL+++H++ +L + P ++V+ +
Sbjct: 407 QGEKLSYMQVDKIVQWFKERKMK--PLLVMHSRHFHKDALKDKPQEASVVQRLVQMLMGA 464
Query: 388 GVLYMTPHGSNDDWYWLYAAV-----KLRCLLVTNDEMRDHIFE 426
+ NDDW+WLYA K + +V+ND+MRDH F+
Sbjct: 465 RMEEAMEEAMNDDWFWLYAGAWCSKQKGKVFIVSNDQMRDHHFQ 508
>gi|407847726|gb|EKG03344.1| hypothetical protein TCSYLVIO_005615 [Trypanosoma cruzi]
Length = 614
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 173/453 (38%), Gaps = 105/453 (23%)
Query: 52 QNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI---PNEASVTSVA 108
+N S+ F + L+LC + K+S G + ++ ++ ++ +E+ + +
Sbjct: 114 ENSVFSMKAFASALFLC-----EKRHKESI---GIELVRKVQASQMVESWTDESVLAVIL 165
Query: 109 RLAASKNDGD-----YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
RL + D ++F+L K++ RLR+ L +C + A+ V E
Sbjct: 166 RLQCAVGDVPAATQMFSFILSKKLL-------RLRSVSVFLAFWCGRGDRRMAFAVYEEA 218
Query: 164 GLMGLSLEQQEIAALLKVSAETGR-VEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV 222
G+ L E L ++ G V ++ L++++ V V E V
Sbjct: 219 LRQGIELRAAEYVELGRLCVAVGEPVSTLHFMLREMQEHVLAVPEAM------------V 266
Query: 223 NGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDA 282
V C + H + E G C CG L A
Sbjct: 267 TDVICPWTQAAGLRMAEVQFPHD-------------DATREPGTCSFCGCVLRGHRFTAA 313
Query: 283 ETERFAQSVAALAM------EREVKANFSEFQDWLEKNAN-YEAIVDGANIGLY------ 329
+ ER V + M VK F ++ ++ + + ++DGAN+G Y
Sbjct: 314 QKERLLSDVMNVVMMAPRGNPARVKVAFEAWRRFISTHGQRIDVLIDGANLGYYGLSSWY 373
Query: 330 ---------------------QQNFTEGG-----FSVPQLDAVVKKLYERSGNKWPLVIL 363
+T+ G + +D V++ +R G + PL++L
Sbjct: 374 EEAKRALLLARGKRAEEIKPKDVTWTKHGPVDVTVNFHLIDLAVQE-AQRRGMR-PLILL 431
Query: 364 HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL------------- 410
H + + +V W +G+LY TP G NDD WLYAA++L
Sbjct: 432 HERHCEPKNMTEEKKVIVATWRREGILYCTPSGLNDDLCWLYAALELTTPTDTTAAGSLV 491
Query: 411 --RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
++TND MRDH F+LL FF +W++RH+
Sbjct: 492 EKTVWVLTNDLMRDHHFKLLSPRFFARWRDRHR 524
>gi|397615332|gb|EJK63364.1| hypothetical protein THAOC_15979, partial [Thalassiosira oceanica]
Length = 1036
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 46/202 (22%)
Query: 278 DIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNAN--YEAIVDGANIGLYQQNFTE 335
D+ D E+F R + F DWL + + AI+DGAN+G Y Q+F +
Sbjct: 528 DLLDLSAEQFEAFSREDGKGRYARDELRSFSDWLARRTGRPFTAIIDGANVGYYMQSFDK 587
Query: 336 GGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRN----------LVEEWN 385
G F+ Q++ +V+ L +R N PLV++ K R + + SH ++
Sbjct: 588 GRFNYHQINYMVETLIDRGEN--PLVVVPGKYGRERFHS-SHGQVQRLDREEVAIMNRLA 644
Query: 386 EKGVLYMTPHGSNDDWYWLYAAVK-------------------------------LRCLL 414
E+G +Y P DD+YW+ A+V R +L
Sbjct: 645 EEGRMYRVPPRCLDDFYWMLASVSDQSSSSSRGPEDGPSDLSFVPGDDPRGRFPGTRPML 704
Query: 415 VTNDEMRDHIFELLGSNFFLKW 436
VTND+MRDH ELL F +W
Sbjct: 705 VTNDQMRDHKLELLEPRLFRRW 726
>gi|71664466|ref|XP_819213.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884505|gb|EAN97362.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 560
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 56/233 (24%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNAN 316
E G C CG L A+ ER V + M VK F ++ ++ +
Sbjct: 240 EPGTCSFCGCVLRGHRFTAAQKERLLSDVMNVVMMAPRGNPTRVKVAFEAWRRFISTHGQ 299
Query: 317 Y-EAIVDGANIGLYQQN----------------------------FTEGGFSVPQ----L 343
+ ++DGAN+G Y + G V +
Sbjct: 300 LIDVLIDGANLGYYGLSSWYEEAKRALLLARGKRAEEIKPKDVTWMKHGAVDVTVNFHLI 359
Query: 344 DAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYW 403
D V++ R PL++LH + + +V +W +G+LY TP G NDD W
Sbjct: 360 DLAVQEAQRRGMQ--PLILLHERHCEPKNMTEEKKVIVAKWRREGILYCTPSGLNDDLCW 417
Query: 404 LYAAVKL---------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
LYAA++L ++TND MRDH F+LL FF +W++RH+
Sbjct: 418 LYAALELTTPTDATAAGSLVEKTVWVLTNDLMRDHHFKLLSPRFFARWRDRHR 470
>gi|71410506|ref|XP_807544.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70871569|gb|EAN85693.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 560
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 56/233 (24%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNAN 316
E G C CG L A+ ER V + M VK F ++ ++ +
Sbjct: 240 EPGTCSFCGCVLRGHRFTAAQKERLLSDVMNVVMMAPRGNPTRVKVAFEAWRRFISTHGQ 299
Query: 317 -YEAIVDGANIGLY---------------------------QQNFTEGG-----FSVPQL 343
+ ++DGAN+G Y +T+ G + +
Sbjct: 300 RIDVLIDGANLGYYGLSSWYEEAKRALLLARGKRAEGIKPKDVKWTKHGPVDVTVNFHLI 359
Query: 344 DAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYW 403
D V++ +R G + PL++LH + + +V +W +G+LY TP G NDD W
Sbjct: 360 DLAVQE-AQRRGMR-PLILLHERHCEPKNMTEEKKVIVAKWRREGILYCTPSGLNDDLCW 417
Query: 404 LYAAVKL---------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
LYAA++L ++TND MRDH F+LL FF +W++RH+
Sbjct: 418 LYAALELTTPTDTTAAGSLVEKTVWVLTNDLMRDHHFKLLSPRFFARWRDRHR 470
>gi|389602885|ref|XP_001567991.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505639|emb|CAM40753.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 705
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 171/470 (36%), Gaps = 92/470 (19%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
F A L+ C ++ D +S S + R + +S + E ++ + RL D D A
Sbjct: 63 FAAALFAC-EAIGDAASGLSLVAEVRRFSSRGISTEWLQTEHVLSVILRLQCVAGDRDGA 121
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK-AYEVEEHMGLMGLSLEQQEIAALL 179
+I + E + + RLR+ L C L + A+ V E + L + + AL
Sbjct: 122 TRMIAYL--EQHGLLRLRSASAFLQYCCGGLRDRRLAFAVYEAALKHKIELTEPDYVALG 179
Query: 180 KVSAETGR-VEKVYQYLQKLRSTVRCVNEETGK-IIEDWFS--------GQKVNGVSCDL 229
+ + + ++ LQ++R V V+E+ + ++E W G + GV L
Sbjct: 180 LLCVQVREPIRTLFFMLQEMREHVAEVSEKMVREVLEPWVRMANEDATVGLRPRGVQTSL 239
Query: 230 GL-------------VKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLAC 276
L V + G G G C +C +L+
Sbjct: 240 RLHRVDDMHHVLQLSVASPPPSTGASARGTVSASDSAAAAPPTGTQVCGVCPACQAKLSG 299
Query: 277 VDIDDAETERFAQSVAALAMEREVKANFS--EFQDW-------LEKNANYEAIVDGANIG 327
A + + L + R + + F+ W L+ + +DGAN+G
Sbjct: 300 YPFTAACRSHLLRELTELIIPRACRNRRAVLGFEHWKRYMHARLDAGDLVDVFIDGANLG 359
Query: 328 LYQ----------------------------------QNFTEG---GFSVPQLDAVVKKL 350
Y Q+ G G + +DA V
Sbjct: 360 YYGLSNWYDLAKKQLMLHRGVPESRITGNDLDFNAQCQSTGRGVDVGVNFELIDAAVTLA 419
Query: 351 YERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL 410
+ G PLV+LH + + + +V+ W ++G LY +P G NDD WLY A+ L
Sbjct: 420 VDTYGMHRPLVMLHERHVEPKFMTSQSTAIVQRWKDRGWLYCSPTGLNDDLCWLYGALLL 479
Query: 411 -------------------RCLLVTNDEMRDHIFELLGSNFFLKWKERHQ 441
R + TND+MRDH F LL F +W++RH+
Sbjct: 480 TDPTDTTPTPVTAASVSSHRTFVCTNDKMRDHHFRLLSPRAFTRWRDRHR 529
>gi|407408493|gb|EKF31914.1| hypothetical protein MOQ_004244 [Trypanosoma cruzi marinkellei]
Length = 612
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 184/491 (37%), Gaps = 109/491 (22%)
Query: 22 PETNFLINLQSCTKSKDLTTAIS-------LYESAHS-----QNLRLSLHHFNALLYLCS 69
P ++ L+ +S + +++L + + E AH +N S+ F + L+LC
Sbjct: 70 PTSSQLVRWKSSSPAEELQRRVGQLVGKGHVDEVAHEVCVGLENSVFSMKAFASALFLC- 128
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVI---PNEASVTSVARLAASKNDGDYAFVLIKR 126
+ K+S G + ++ ++ ++ +E+ + + RL + D A +
Sbjct: 129 ----EKRHKESI---GIELVRKVQASQLVESWTDESVLAVILRLQCAVGDVPAATQMFSF 181
Query: 127 MNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG 186
M ++ + RLR+ L +C + A+ V E G+ L + L ++ G
Sbjct: 182 MVSKKLL--RLRSVSVFLAFWCGRGDRRMAFAVYEEALRQGIELRAADYVELGRLCVAVG 239
Query: 187 R-VEKVYQYLQKLRSTVRCVNEE-TGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWH 244
V ++ L++++ V V E +I W +
Sbjct: 240 EPVSTLHFMLREMQEHVLTVPEAMVTDVIRPWAEAAGLRMAEVQFP-------------- 285
Query: 245 GLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------ER 298
+ E G C C L A+ ER V + M
Sbjct: 286 ------------HDDATREPGTCSFCEGVLKGHRFTAAQKERLLSDVMNVVMMAPRGNPT 333
Query: 299 EVKANFSEFQDWLEKNAN-YEAIVDGANIGLYQ-QNFTEGG------------------- 337
VK F ++ ++ + + ++DGAN+G Y ++ EG
Sbjct: 334 RVKVAFEAWRRFISTHGQRIDVLIDGANLGYYGLSSWYEGAKRALLLARGKRAEEIKPKD 393
Query: 338 ------------FSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWN 385
+ +D V++ R PL++LH + S R + +W
Sbjct: 394 VTWTKHGAVDVTVNFHLIDLAVQEAQRRGMQ--PLILLHERHCESKNMTEEKRPIFAKWR 451
Query: 386 EKGVLYMTPHGSNDDWYWLYAAVKLR---------------CLLVTNDEMRDHIFELLGS 430
+G++Y TP G NDD WLYAA++L ++TND MRDH F+LL
Sbjct: 452 REGIIYCTPSGLNDDLCWLYAALELTTPTDTTTAGSPVEKTVWVLTNDLMRDHHFKLLSP 511
Query: 431 NFFLKWKERHQ 441
FF +W++RH+
Sbjct: 512 RFFARWRDRHR 522
>gi|323454977|gb|EGB10846.1| hypothetical protein AURANDRAFT_62371 [Aureococcus anophagefferens]
Length = 677
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 321 VDGANIGLYQQNFTEGGFSVPQLDAVVKKLYER-SGNKWPLVILHNKRLRSLWENPSHRN 379
+DGAN+ Y +NF G F QLD + L G P+++L K R+ + R
Sbjct: 138 LDGANVAWYGRNFRGGNFDHGQLDRAMGALPAFFDGRVDPVLVLPRKHARASRLSGDARR 197
Query: 380 LVEEWN-EKGVLYMTPHGSNDDWYWLYAAVKLRC----LLVTNDEMRDHIFELLGSNFFL 434
LV+ W E +L P GS+DDWYW+ A++ + V+ND RDH F L F
Sbjct: 198 LVDGWRREPHLLTTVPPGSDDDWYWMLASLSVASRGCDFAVSNDAARDHHFMHLAPLPFQ 257
Query: 435 KWKERH 440
+WK RH
Sbjct: 258 RWKRRH 263
>gi|326435878|gb|EGD81448.1| hypothetical protein PTSG_02169 [Salpingoeca sp. ATCC 50818]
Length = 662
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 185/432 (42%), Gaps = 60/432 (13%)
Query: 26 FLINLQSCTKSKDLTTAISLYESAHS---QNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
L ++ TK D+ A L + + + Q + L F++LLY+ + +A P
Sbjct: 218 MLGDIHRATKDLDVDMASVLLQKSVALADQGILLPDTSFHSLLYIFA-TANLPLK----- 271
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
F+ ++ +LS P+E ++ + L AS ND D A +I M FN+VP RT+
Sbjct: 272 --AFQTYEMLLSVGYQPSENVLSKLVALCASNNDLDLAQDVINTMR-RFNIVPHYRTF-- 326
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK-LRST 201
+++ E + ++ +E++ ++ Y+ + L
Sbjct: 327 --------------WKLIETRARVDATVAIEEVSRVMDELRMPYPGHSAYESMNDVLAVV 372
Query: 202 VRCVNEETGKIIEDWFSGQKVNGVSCDLGLVK--NAVLKNGGGWHGLGWIGQG-KWVVKR 258
V C ++ ++V ++ L + N L L +G+ +W V
Sbjct: 373 VECA-------VQQLCGDERVQQLAVLFRLFETSNQPLGERLCAAILEHVGRSDEWDVAP 425
Query: 259 GSVDE-SGKCCSCGDQLACVDIDDAETERFAQSVAA-LAMEREVKANFSEFQDWLEKNAN 316
++++ +G+C SC D L + + D + + + +V L ER + + +E +
Sbjct: 426 TTIEQHTGRCMSCADALRPIALSDDDLSQLSGAVTQYLQHERVPDTEVASLKQMIENLGD 485
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL---HNKRLRSLWE 373
E +DG N+G + G QLD V+ ++ + V++ H + + W+
Sbjct: 486 VEIFIDGLNVGHF-------GVKAFQLDLVLAVAHQLKAAGYSYVVVLRRHAIKRTNRWQ 538
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR--CLLVTNDEMRDHIF---ELL 428
++E ++G L + +DD ++ AAV+LR ++TND RDH++ ++
Sbjct: 539 QAR----IDELQDEGRLLLLADKLSDDIRFICAAVQLRPHSYVLTNDMFRDHMYRVSKIP 594
Query: 429 GSNFFLKWKERH 440
G + F +W+ H
Sbjct: 595 GGHLFDRWRRGH 606
>gi|224009498|ref|XP_002293707.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970379|gb|EED88716.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 992
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 37/165 (22%)
Query: 307 FQDWL--EKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILH 364
F +WL + + AIVDGANIG + Q+F +G F+ Q+ + L R N PLV++
Sbjct: 692 FSNWLNTREGEPFTAIVDGANIGYFMQSFDKGRFNYHQIKFMCDTLEARGEN--PLVVIP 749
Query: 365 NK---------RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK------ 409
NK + +P ++++ +G LY P DD YW+ ++V
Sbjct: 750 NKYGYNEFYSSKKEYQKLDPVEIKIMKDLRSQGKLYQVPPRCLDDLYWMLSSVSDQTVSR 809
Query: 410 ------------------LRCLLVTNDEMRDHIFELLGSNFFLKW 436
R +LV+ND+MRDH ELL F +W
Sbjct: 810 GGRDLSVPSNDPSGRWPGTRPMLVSNDQMRDHKLELLEPRLFRRW 854
>gi|147858758|emb|CAN83101.1| hypothetical protein VITISV_007460 [Vitis vinifera]
Length = 435
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K ALR GF+ V NEA++TS+ R+A S +GD AF ++K+ + PRL
Sbjct: 265 KKYALRSGFQ--------EVPMNEATLTSLVRMAMSMGNGDMAFDMVKQ-TKPLGINPRL 315
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
R+Y LF FC N + EKA+ VEE M G+ LE+ +L
Sbjct: 316 RSYGSELFTFCNNGDIEKAFGVEERMLEHGVYLEKPSFIPIL 357
>gi|298707574|emb|CBJ30158.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 606
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 43/272 (15%)
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRM-NNEFN---VVPRLRTYDPAL 144
F ML ++P+E+ T V RL + A ++ M E+ PR R+Y P +
Sbjct: 326 FADMLKYGMLPSESCATMVIRLRVQRGKLAEAMEVLAMMEGREYQKKFCRPRFRSYQPVI 385
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC 204
E + ++ +HM + ++ + L++ A+ +V
Sbjct: 386 CELLRRGEMDGVMQLWKHMEWHSIRPKESFLLDLIEGIAKNHQVSS-------------- 431
Query: 205 VNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDES 264
+ ++ + G + VK V GW+ KW V E
Sbjct: 432 -RDSLAQLADHLLDGMSKTLIYPSAPTVKTLV----EGWN-------AKWT----DVSEQ 475
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAME---REVKANFSEFQDW---LEKNANYE 318
G C +CG+ L + + R S+ +A + REV+ S F +W LE
Sbjct: 476 GTCTTCGEMLQGTRLTPEDRARMRSSIVRIAAQNGAREVQ-RLSWFANWFCSLEDPPT-- 532
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQLDAVVKKL 350
AI+DG N+G QNF EGGFS+ Q+D + + L
Sbjct: 533 AIIDGPNVGFMNQNFKEGGFSLTQVDWLAEHL 564
>gi|195048433|ref|XP_001992525.1| GH24799 [Drosophila grimshawi]
gi|193893366|gb|EDV92232.1| GH24799 [Drosophila grimshawi]
Length = 537
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSE 306
++ V +D GKC +C L V I DA+ +S A + ++ +
Sbjct: 288 QFQVASTRLDRMGKCTACQQHLQHVAISDAQFAELHESFLAKVLIRNDVFQKSTPEEVAR 347
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQ-----LDAVVKKLYERSGNKWPLV 361
F+ ++E+ A Y+ ++DG N+ ++ G PQ L VV+ ER ++
Sbjct: 348 FKQYVEQTAPYDCVIDGLNVA-----YSTGNKKPPQQLAKLLATVVRYFKERRKR---VL 399
Query: 362 ILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDE 419
+L + +R+ W P + + +++T + S+DD + LYA ++ + D
Sbjct: 400 VLGRQHMRN-WSKPVWQYI----QSNASVFLTNNLSHDDPFLLYATLRSGQETDFFSRDL 454
Query: 420 MRDHIFELLGSNF---FLKWKERHQ 441
MR H F LLG + F +W++ HQ
Sbjct: 455 MRSHAF-LLGGDLKAVFRRWQQEHQ 478
>gi|195402009|ref|XP_002059603.1| GJ14858 [Drosophila virilis]
gi|194147310|gb|EDW63025.1| GJ14858 [Drosophila virilis]
Length = 541
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 30/197 (15%)
Query: 261 VDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKN 314
+D GKC +C L V I DA+ +S A + ++ + F+ ++E+
Sbjct: 296 LDRMGKCGACQQHLQHVAISDAQFAELRESFLAKVLIRNDVFQKSTPQEVARFKQYVEQT 355
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQ-----LDAVVKKLYERSGNKWPLVILHNKRLR 369
A Y+ ++DG N+ ++ G PQ L VV+ ER +++L + +R
Sbjct: 356 APYDCVIDGLNVA-----YSTGNKKPPQQLAKLLATVVRYFKERRKR---VLVLGRQHMR 407
Query: 370 SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFEL 427
+ W P+ + + +++T + ++DD + LYA + + D MR H F L
Sbjct: 408 N-WSRPAMQYI----QNNASVFLTNNLTHDDPFLLYATLHSGQDTDFFSRDLMRSHAF-L 461
Query: 428 LGSNF---FLKWKERHQ 441
LGS F +W++ HQ
Sbjct: 462 LGSELKAIFRRWQQEHQ 478
>gi|298707702|emb|CBJ26019.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 115
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 398 NDDWYWLYAAVKL--RCLLVTNDEMRDHIFELLGSNFFLKWKERHQT 442
NDDWYWLYAAV L++TNDEMRDH F +L F +WKERHQ
Sbjct: 10 NDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQA 56
>gi|157138591|ref|XP_001664268.1| hypothetical protein AaeL_AAEL003879 [Aedes aegypti]
gi|108880556|gb|EAT44781.1| AAEL003879-PA [Aedes aegypti]
Length = 515
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 261 VDESGKCCSCGDQLACVDIDDAETERFAQS-VAALAMEREV-----KANFSEFQDWLEKN 314
V +SGKC C LA + + + + + A+ +++E+ FQ +L+K
Sbjct: 273 VTDSGKCSHCKRTLASIVVPEESFRALRDAFIQAVIIKKEIFNKTTPKELERFQAFLKKT 332
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWEN 374
Y+ ++DG N+ N Q+ AVVK Y R + V++ ++ W +
Sbjct: 333 KPYDVVIDGLNVAFSTGNQKSPAVYAMQIAAVVKH-YVRQRKR---VLIIGRQHMDRWRS 388
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF 432
+ + E L++T S DD + LYAA++ + + D MR H F LLG
Sbjct: 389 KDMKYI----RENAFLFLTEDLSQDDPFLLYAALESGPQTDFFSRDLMRKHSF-LLGDEL 443
Query: 433 ---FLKWKERHQ 441
F +W++ HQ
Sbjct: 444 GGVFKRWQQEHQ 455
>gi|397567103|gb|EJK45394.1| hypothetical protein THAOC_35992 [Thalassiosira oceanica]
Length = 438
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 40/168 (23%)
Query: 302 ANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLV 361
A FSE D E + AIVDGAN+ F G ++ QL V L ++ + PLV
Sbjct: 212 AKFSERLDTREGKP-FTAIVDGANVAY----FGFGKVNLHQLMHAVNALQDQ--GEHPLV 264
Query: 362 ILHNKRLRSLWE---------NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--- 409
+ K R + L+++ E+G+LY+ P DD YW+ A+V
Sbjct: 265 VFPLKYTRKSFHLRYGVVQVLGEEELGLLQDLKERGLLYVVPPMCLDDLYWMLASVSDQT 324
Query: 410 ---------------------LRCLLVTNDEMRDHIFELLGSNFFLKW 436
LR +++TND MRDH ELL F +W
Sbjct: 325 TSRKGVSIDVPKHDNSGRFPGLRPMVITNDRMRDHKLELLDERAFRRW 372
>gi|219122687|ref|XP_002181672.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406948|gb|EEC46886.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 690
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 38/172 (22%)
Query: 301 KANFSEFQDWLEKNAN--YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKW 358
+ N EF +WL ++ + AIVDGAN+ G Q+ VV KL E G K
Sbjct: 461 RRNLFEFSEWLREHEGEPFTAIVDGANVAYAGH----GNVHYSQVQLVVDKL-EDMGEKV 515
Query: 359 PLVILHNKRLRSLW--------ENPSHR--NLVEEWNEKGVLYMTPHGSNDDWYWLYAAV 408
LV++ +K + + + S R ++ ++G +Y P DD+YW+ A+V
Sbjct: 516 -LVVMPSKYVGEKFYVAGIDSVQQLSEREVGIMNGLLDEGKMYQVPAACLDDYYWMLASV 574
Query: 409 K--------------------LRCLLVTNDEMRDHIFELLGSNFFLKWKERH 440
LR +LVTND+MRDH LL F +W H
Sbjct: 575 ANQTEHQLHVSIDNRQRRFPGLRPMLVTNDQMRDHKLALLEKRLFRRWTSCH 626
>gi|170034795|ref|XP_001845258.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876388|gb|EDS39771.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 519
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 259 GSVDESGKCCSCGDQLACVDIDDAETERFAQS-VAALAMEREV-----KANFSEFQDWLE 312
+ +SGKC C LA + + + + + + + A+ +++++ FQ +L
Sbjct: 275 ARMTDSGKCSHCKSTLASIVVPEDQFQALRDAFIQAVIIKKDIFNKTTPKELERFQTFLA 334
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
+ Y+ ++DG N+ N QL AVV+ Y R + V++ ++ W
Sbjct: 335 RTKPYDVVIDGLNVAFSAGNQKSPAVYAMQLAAVVRH-YVRHKKR---VLVIGRQHMDRW 390
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGS 430
+ + + E L+ T S DD + LYAA++ R + D MR H F LLG
Sbjct: 391 RSKDMKYI----RENAFLFFTEDLSQDDPFLLYAALESGPRTDFFSRDLMRKHSF-LLGD 445
Query: 431 NF---FLKWKERHQ 441
F +W++ HQ
Sbjct: 446 ELGAVFKRWQQEHQ 459
>gi|413933974|gb|AFW68525.1| hypothetical protein ZEAMMB73_493916 [Zea mays]
Length = 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
+WLE N +Y+AIVDGANI LYQQNF EGGFS+ Q+
Sbjct: 84 EWLEANKDYQAIVDGANIALYQQNFVEGGFSLTQM 118
>gi|348674664|gb|EGZ14482.1| hypothetical protein PHYSODRAFT_505070 [Phytophthora sojae]
Length = 551
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 45/219 (20%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSV----AALAMEREVKANFSEFQDWLE-KNANYEA 319
KC CG L + + E ++ + LA E VK F++WL ++ N++
Sbjct: 245 SKCPCCGQALCKQGMTEQERAYMLAAIESRRSKLAPENTVKEYLDPFREWLMLRHENFQL 304
Query: 320 ---------------IVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS---------- 354
++DG NI QNF G + + Q+DA+ K L +
Sbjct: 305 QNVVAGSKDGRPLHFVLDGPNIAYINQNFEAGTYRLDQVDAIAKDLQAQGHLVSITMPQA 364
Query: 355 --GNKWPLVIL--HNKRLR------SLWENPSHRNLVEEWNEKGVLYMTPHGS-NDDWYW 403
+K+ + I NK +R S P + ++E W ++ +LY +DD +W
Sbjct: 365 YLADKFVVRIRTKQNKSMRRQGKFVSRERTPEEKAIMERWKDEDMLYSCRTDFLSDDLFW 424
Query: 404 LYAAVKL--RCLLVTNDEMRDH--IFELLGSNFFLKWKE 438
LYA+V + +VTND+ RDH + + +WK+
Sbjct: 425 LYASVLMGREGRVVTNDQGRDHGSSTPAISMDLIARWKD 463
>gi|351700058|gb|EHB02977.1| Mitochondrial ribonuclease P protein 3 [Heterocephalus glaber]
Length = 582
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKA 302
I +W + ++ +SG+C CG+ + + + E + + V ++ +
Sbjct: 329 IPGKQWKGQFTTIQKSGQCSGCGNTIESIHLSPEEYDFLKKKVMKDVIDGGDQYRKTTPQ 388
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
F+++++ + ++ ++DG N+ + F++ S LD VV L ++ L
Sbjct: 389 ELKRFENFVKSHPPFDIVIDGLNVA---KMFSKARESQFLLD-VVSLLAKQKLQLLVLGR 444
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEM 420
H + RS W R+ +E+ ++ + S DD + LYA + C +TND M
Sbjct: 445 KHMLKQRSRWR----RDEMEKVKKQASCFFADDISQDDLFLLYATLNSGNHCKFITNDLM 500
Query: 421 RDH---IFELLGSNFFLKWKERHQ 441
RDH +F+ + F KW++ HQ
Sbjct: 501 RDHKACLFDAKTKHLFFKWQQGHQ 524
>gi|195162441|ref|XP_002022064.1| GL14442 [Drosophila persimilis]
gi|194103962|gb|EDW26005.1| GL14442 [Drosophila persimilis]
Length = 530
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 30/193 (15%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQS------VAALAMEREVKANFSEFQDWLEKNANYE 318
GKC C L V I D E + ++ + ++ F+ ++EK A Y+
Sbjct: 291 GKCQECRQHLQPVAISDEEFRQLSECFLEKVLIRGDVFQKSTPEEMLRFKQYVEKTAPYD 350
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ-----LDAVVKKLYERSGNKWPLVILHNKRLRSLWE 373
++DG N+ ++ G PQ L VV+ ER +++L + +R W
Sbjct: 351 CVIDGLNVA-----YSTGAKKAPQQLAKLLATVVRHFKERHKR---VLVLGREHMRK-WS 401
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSN 431
++ + L++T + S+DD + LYA ++ + D MR H F LLG+
Sbjct: 402 ----KSAMHYVQNNASLFLTNNLSHDDPFLLYATIRSGQETDFFSRDLMRTHAF-LLGAE 456
Query: 432 F---FLKWKERHQ 441
F +W++ HQ
Sbjct: 457 LKPIFRRWQQEHQ 469
>gi|198467669|ref|XP_001354471.2| GA14011 [Drosophila pseudoobscura pseudoobscura]
gi|198149353|gb|EAL31524.2| GA14011 [Drosophila pseudoobscura pseudoobscura]
Length = 530
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 30/193 (15%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQS------VAALAMEREVKANFSEFQDWLEKNANYE 318
GKC C L V I D E + ++ + ++ F+ ++EK A Y+
Sbjct: 291 GKCQECRQHLQPVAISDEEFRQLSECFLEKVLIRGDVFQKSTPEEVLRFKQYVEKTAPYD 350
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ-----LDAVVKKLYERSGNKWPLVILHNKRLRSLWE 373
++DG N+ ++ G PQ L VV+ ER +++L + +R W
Sbjct: 351 CVIDGLNVA-----YSTGAKKAPQQLAKLLATVVRHFKERHKR---VLVLGREHMRK-WS 401
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSN 431
++ + L++T + S+DD + LYA ++ + D MR H F LLG+
Sbjct: 402 ----KSAMHYVQNNASLFLTNNLSHDDPFLLYATIRSGQETDFFSRDLMRTHAF-LLGAE 456
Query: 432 F---FLKWKERHQ 441
F +W++ HQ
Sbjct: 457 LKPIFRRWQQEHQ 469
>gi|195130621|ref|XP_002009750.1| GI15064 [Drosophila mojavensis]
gi|193908200|gb|EDW07067.1| GI15064 [Drosophila mojavensis]
Length = 537
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 20/188 (10%)
Query: 265 GKCCSCGDQLACVDIDDAE----TERFAQSVAAL--AMEREVKANFSEFQDWLEKNANYE 318
GKC +C L V I DA+ E F Q V ++ F+ ++EK A Y+
Sbjct: 299 GKCSTCQQNLQHVAISDAQFAELRESFLQKVLIRNDVFQKTTPQELQRFKQYVEKTAPYD 358
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHR 378
++DG N+ N L VV+ ER V++ ++ S W P+
Sbjct: 359 CVIDGLNVAYSTGNKKPPAQLAKLLATVVRYFKERRKR----VLVLGRQHMSNWSKPA-- 412
Query: 379 NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF---F 433
++ +++T + ++DD + LYA ++ + D MR H LLG+ F
Sbjct: 413 --MQYIQSNASVFLTNNLTHDDPFLLYATLRSGQDTDFFSRDLMRAHA-HLLGTELKAIF 469
Query: 434 LKWKERHQ 441
+W++ HQ
Sbjct: 470 RRWQQEHQ 477
>gi|195340392|ref|XP_002036797.1| GM12478 [Drosophila sechellia]
gi|194130913|gb|EDW52956.1| GM12478 [Drosophila sechellia]
Length = 544
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNANYE 318
GKC SC L V I D E + ++ + +R + F+ ++EK A Y+
Sbjct: 292 GKCQSCQQHLQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEVARFKKFVEKTAPYD 351
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ----LDAVVKKLYERSGNKWPLVILHNKRLRSLWEN 374
++DG N+ ++ G PQ L A V + + + +++L + +R+ W
Sbjct: 352 CVIDGLNVA-----YSTGTKKTPQQMAKLVATVVRHFREQDKR--VLVLGREHMRN-WS- 402
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF 432
+ + + L++T + S+DD + LYA ++ + D MR H F LG+
Sbjct: 403 ---KQAMHYVHSNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSHAFH-LGTEL 458
Query: 433 ---FLKWKERHQ 441
F +W++ HQ
Sbjct: 459 KPIFRRWQQEHQ 470
>gi|325186327|emb|CCA20832.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 871
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 92/234 (39%), Gaps = 61/234 (26%)
Query: 255 VVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAAL------------AMEREVKA 302
V++ + S +C C L DI E +R + A+ R VK
Sbjct: 294 VIEEHEISCSNRCPHCKSSLQKEDISVIEWDRLINFIELRKTSKSKREGKQGAVPRLVKH 353
Query: 303 NFSEFQDW-LEKNANYEA-----IVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-- 354
F+DW LEK+A + I+DG N+ QNF +G F + +D V L ++
Sbjct: 354 ELEPFRDWMLEKHAALQPGRLHYILDGPNLAYLNQNFAQGNFRLDHVDHVASLLADQGHL 413
Query: 355 -GNKWPLVILHNKRL---RSLWE---------NPSHRN----------LVEEWNEKGVLY 391
P + L + L R+ W+ N SH + ++ W EK LY
Sbjct: 414 VTITMPSMYLGSTSLIQVRTQWQKNMRNKKTSNQSHSHTRERTIDDERILANWKEKSWLY 473
Query: 392 MTPHGS-NDDWYWLYAAVKLRCL-----------------LVTNDEMRDHIFEL 427
+ +DD+YW+YA++ L L +VTND RDH E
Sbjct: 474 GCETATLSDDYYWIYASLILGRLASHQDESLHSIGHHNVRVVTNDRGRDHTLEF 527
>gi|347966898|ref|XP_321093.4| AGAP001968-PA [Anopheles gambiae str. PEST]
gi|333469850|gb|EAA01143.5| AGAP001968-PA [Anopheles gambiae str. PEST]
Length = 515
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 256 VKRGSVDESGKCCSCGDQLACV----DIDDAETERFAQSVAA--LAMEREVKANFSEFQD 309
V+ + + GKC SC L+ + D+ + ++F +V R + FQ
Sbjct: 270 VQETRITDGGKCSSCKGTLSSIVVSEDMFQSLRDKFLTAVLINKEIFNRTTPEELNRFQA 329
Query: 310 WLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLR 369
+L K Y+ ++DG N+ N Q+ AVV+ Y R + V++ ++
Sbjct: 330 FLAKTLPYDVVIDGLNVAFSSGNQKSPIVYAQQVAAVVRH-YVRQKKR---VLVIGRKHM 385
Query: 370 SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFEL 427
W + + + E L++T S DD + LYAA++ + + D MR H F +
Sbjct: 386 DKWRSREMKYI----RENSFLFLTDDLSQDDPFLLYAALESGPKTDFFSRDLMRKHSF-M 440
Query: 428 LG---SNFFLKWKERHQ 441
LG S F +W++ HQ
Sbjct: 441 LGNELSGVFKRWQQEHQ 457
>gi|194896203|ref|XP_001978433.1| GG19582 [Drosophila erecta]
gi|190650082|gb|EDV47360.1| GG19582 [Drosophila erecta]
Length = 545
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNANYE 318
GKC SC L V I D E R ++ + +R + F+ +++K A Y+
Sbjct: 292 GKCQSCQQHLQPVAISDEEFRRLSECFLERVLIRRDVFQRSTPEEVARFKKFVDKTAPYD 351
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ----LDAVVKKLYERSGNKWPLVILHNKRLRSLWEN 374
++DG N+ ++ G PQ L A V + + + +++L + +R+ W
Sbjct: 352 CVIDGLNVA-----YSTGTKKAPQQLANLVATVVRHFRDQDKR--VLVLGREHMRN-WS- 402
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF 432
+ + + L++T + S+DD + LYA ++ + D MR H F LG
Sbjct: 403 ---KQAMHFVHSNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSHAFH-LGPEL 458
Query: 433 ---FLKWKERHQ 441
F +W+++HQ
Sbjct: 459 KPVFRRWQQQHQ 470
>gi|294899883|ref|XP_002776791.1| multidrug resistance pump, putative [Perkinsus marinus ATCC 50983]
gi|239883992|gb|EER08607.1| multidrug resistance pump, putative [Perkinsus marinus ATCC 50983]
Length = 576
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 16/67 (23%)
Query: 390 LYMTPHGSNDDWYWLYAAVKL----------------RCLLVTNDEMRDHIFELLGSNFF 433
LY P +NDDW+W+YAA++ + +++ND MRDH + ++ F
Sbjct: 450 LYRVPPRANDDWFWMYAAIRCEEQARALAKNENRTADKVFVISNDLMRDHFWRMMVPQSF 509
Query: 434 LKWKERH 440
L+W+ERH
Sbjct: 510 LRWRERH 516
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 47/300 (15%)
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
PS R ++ Q+L E +T + +LA + + D A + + F
Sbjct: 76 PSKDIETARKILKLAQQVLDKCPQRQENILTGMVKLAVAAGEIDLALQYHEECLSNFQ-- 133
Query: 135 PRLRTYDP--ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
PRLR+Y P L+ + + + A ++ + G +L + E++ LL
Sbjct: 134 PRLRSYAPLLQLYSSPQYRDFDAAMKLVADLEGRGFTLGEAELSYLL------------- 180
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQG 252
RC GK D+ + + N + V+ + + +GQ
Sbjct: 181 ----------RCC--PPGKTF-DFLADKVANTID---------VVTDSRLTEAIKTMGQR 218
Query: 253 KWVVKRGSVDES--GKCCSCGDQLACVDIDDAETERFA---QSVAALAMEREVKANFSEF 307
V+ D S G+C + +L +DI D E + Q +A + + + F +
Sbjct: 219 DPDVEVLPTDISVEGRCSATDIKLRSIDITDEELHELSDLTQRLATQNLSEDQQQKFLDL 278
Query: 308 QDWLEKNANYEAI-VDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
+ +L+ + I VD ANIG QN+ +G F Q+D VV+ + + G K LVILH+K
Sbjct: 279 KQYLDSQSTPATIIVDAANIGHMNQNYADGFFQHSQIDDVVEH-FLKEGKKV-LVILHSK 336
>gi|17946134|gb|AAL49108.1| RE55427p [Drosophila melanogaster]
Length = 364
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNANYE 318
GKC SC L V I D E + ++ + +R + F+ ++EK A Y+
Sbjct: 112 GKCQSCQQHLQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEVARFKKFVEKTAPYD 171
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ----LDAVVKKLYERSGNKWPLVILHNKRLRSLWEN 374
++DG N+ ++ G PQ L A V + + + +++L + +R+ W
Sbjct: 172 CVIDGLNVA-----YSTGTKKTPQQLAKLVATVVRHFREQDKR--VLVLGREHMRN-WS- 222
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF 432
+ + + L++T + S+DD + LYA ++ + D MR H F LG+
Sbjct: 223 ---KQAMHYVHCNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSHAFH-LGTEL 278
Query: 433 ---FLKWKERHQ 441
F +W++ HQ
Sbjct: 279 KPIFRRWQQEHQ 290
>gi|24640102|ref|NP_572309.2| CG15896, isoform A [Drosophila melanogaster]
gi|386763916|ref|NP_001245549.1| CG15896, isoform B [Drosophila melanogaster]
gi|7290700|gb|AAF46147.1| CG15896, isoform A [Drosophila melanogaster]
gi|383293244|gb|AFH07263.1| CG15896, isoform B [Drosophila melanogaster]
Length = 544
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNANYE 318
GKC SC L V I D E + ++ + +R + F+ ++EK A Y+
Sbjct: 292 GKCQSCQQHLQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEVARFKKFVEKTAPYD 351
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ----LDAVVKKLYERSGNKWPLVILHNKRLRSLWEN 374
++DG N+ ++ G PQ L A V + + + +++L + +R+ W
Sbjct: 352 CVIDGLNVA-----YSTGTKKTPQQLAKLVATVVRHFREQDKR--VLVLGREHMRN-WS- 402
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF 432
+ + + L++T + S+DD + LYA ++ + D MR H F LG+
Sbjct: 403 ---KQAMHYVHCNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSHAFH-LGTEL 458
Query: 433 ---FLKWKERHQ 441
F +W++ HQ
Sbjct: 459 KPIFRRWQQEHQ 470
>gi|54650516|gb|AAV36837.1| SD17694p [Drosophila melanogaster]
Length = 544
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDWLEKNANYE 318
GKC SC L V I D E + ++ + +R + F+ ++EK A Y+
Sbjct: 292 GKCQSCQQHLQPVAISDEEFRQLSECFLERVLIRRDVFQRSTPEEVARFKKFVEKTAPYD 351
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQ----LDAVVKKLYERSGNKWPLVILHNKRLRSLWEN 374
++DG N+ ++ G PQ L A V + + + +++L + +R+ W
Sbjct: 352 CVIDGLNVA-----YSTGTKKTPQQLAKLVATVVRHFREQDKR--VLVLGREHMRN-WS- 402
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGSNF 432
+ + + L++T + S+DD + LYA ++ + D MR H F LG+
Sbjct: 403 ---KQAMHYVHCNASLFLTSNLSHDDPFLLYATLRSGQETDFFSRDLMRSHAFH-LGTEL 458
Query: 433 ---FLKWKERHQ 441
F +W++ HQ
Sbjct: 459 KPIFRRWQQEHQ 470
>gi|426376677|ref|XP_004055120.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 583
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + +E +
Sbjct: 334 QWKGQFTTVRKSGRCSGCGKTIESIQLSPEEYECLKGKIMKDVIEGGDQYRKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +R+ L H
Sbjct: 394 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 450 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQ 525
>gi|27882031|gb|AAH44580.1| KIAA0391 [Homo sapiens]
Length = 583
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 334 QWKGQFTTVRKSGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +RS L H
Sbjct: 394 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRSLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 450 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQ 525
>gi|426376679|ref|XP_004055121.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 2
[Gorilla gorilla gorilla]
Length = 488
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + +E +
Sbjct: 239 QWKGQFTTVRKSGRCSGCGKTIESIQLSPEEYECLKGKIMKDVIEGGDQYRKTTPQELKR 298
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +R+ L H
Sbjct: 299 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHML 354
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 355 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 410
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 411 ACLPDAKTQRLFFKWQQGHQ 430
>gi|292623047|ref|XP_683289.3| PREDICTED: mitochondrial ribonuclease P protein 3-like [Danio
rerio]
Length = 578
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
KW K SV SG C +C L + + + E + +V +E +
Sbjct: 330 KWRGKFSSVTPSGDCRNCKALLESIQLTEVEYAQLKHNVMEKVIEGGDVFNKSNPEELKS 389
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++++ ++ ++DG N+ + + L AVV +L ++S N L H
Sbjct: 390 FKSFVKQRPPFDIVIDGLNVAKMLPHAAQSE----TLLAVVSELEQQSLNILVLGRKHML 445
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHI 424
R W+ R + +K + T S DD Y LYAA+ + C ++ D MRDH
Sbjct: 446 RHSRNWD----RQNMSLIKQKAHCFFTEDISEDDPYLLYAALNSGVHCKFLSRDLMRDHK 501
Query: 425 FELLGSN---FFLKWKERHQ 441
L S F KW+ HQ
Sbjct: 502 ACLPDSATRCLFFKWQRGHQ 521
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSA 81
+ ++ +Q+C D ++ ++LY+ + L++ H F+ ++ LC K+
Sbjct: 292 KITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLC---------KEGK 342
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTY 140
L G+ VF+ M+ PN A T + A + A L+ RM +E FN P + TY
Sbjct: 343 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN--PDVVTY 400
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GRV++ + +++
Sbjct: 401 SVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
>gi|426376681|ref|XP_004055122.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 3
[Gorilla gorilla gorilla]
Length = 567
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + +E + F+++++
Sbjct: 328 ESGRCSGCGKTIESIQLSPEEYECLKGKIMKDVIEGGDQYRKTTPQELKRFENFIKSRPP 387
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ E L VV +L +R+ L H R S W
Sbjct: 388 FDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWS--- 440
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
R+ +EE ++ + S DD + LYA + C +T D MRDH + +
Sbjct: 441 -RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQR 499
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 LFFKWQQGHQ 509
>gi|194384400|dbj|BAG64973.1| unnamed protein product [Homo sapiens]
Length = 567
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 328 ESGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPP 387
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ E L VV +L +RS L H R S W
Sbjct: 388 FDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRSLRLLVLGRKHMLRRSSQWS--- 440
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
R+ +EE ++ + S DD + LYA + C +T D MRDH + +
Sbjct: 441 -RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQR 499
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 LFFKWQQGHQ 509
>gi|62988276|ref|NP_055487.2| mitochondrial ribonuclease P protein 3 isoform 1 precursor [Homo
sapiens]
gi|221222466|sp|O15091.2|MRRP3_HUMAN RecName: Full=Mitochondrial ribonuclease P protein 3;
Short=Mitochondrial RNase P protein 3; Flags: Precursor
gi|21595091|gb|AAH32221.1| KIAA0391 [Homo sapiens]
gi|28071000|emb|CAD61881.1| unnamed protein product [Homo sapiens]
gi|119586282|gb|EAW65878.1| KIAA0391, isoform CRA_a [Homo sapiens]
gi|119586284|gb|EAW65880.1| KIAA0391, isoform CRA_a [Homo sapiens]
gi|119586288|gb|EAW65884.1| KIAA0391, isoform CRA_a [Homo sapiens]
Length = 583
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 334 QWKGQFTTVRKSGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +R+ L H
Sbjct: 394 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 450 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQ 525
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN S T++ D A + K+M ++ ++ P L TY+ ++ C+N +
Sbjct: 234 DNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKNGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ M + GL ++ L+ S + G +E ++Y +++
Sbjct: 293 KQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRM 337
>gi|375493516|ref|NP_001243608.1| mitochondrial ribonuclease P protein 3 isoform 3 [Homo sapiens]
Length = 488
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 239 QWKGQFTTVRKSGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 298
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +R+ L H
Sbjct: 299 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHML 354
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 355 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 410
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 411 ACLPDAKTQRLFFKWQQGHQ 430
>gi|350396203|ref|XP_003484477.1| PREDICTED: hypothetical protein LOC100740846 [Bombus impatiens]
Length = 473
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 230 GLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQ 289
G NA + + + W V + + S +C C ++ + D + ER Q
Sbjct: 211 GPYDNAYTTQDIAFECMNACIECGWSVSQTVMSRS-RCRKCNVDISQQSLSDEDYERLLQ 269
Query: 290 SVAALAMEREVKANFSEFQ---DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAV 346
++ + ++ E Q ++++KN Y+ IVDG NI +Y+ T+ GF +D V
Sbjct: 270 AIKKRLIFDKIVTEPEEMQLFINFIDKNKPYDIIVDGLNI-MYR---TKHGFRKDIMDEV 325
Query: 347 --VKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWL 404
+ K YE+ NK++ + + + + + + + +GS DD + L
Sbjct: 326 KRIFKSYEK----------QNKKILIIAKEHVKKFIAKIDLQSADCFYVENGSKDDVFLL 375
Query: 405 YAAVKLR--CLLVTNDEMRDHIFELLGSN---FFLKWKERHQ 441
YAA R +++ D MR H+F L F KW+ HQ
Sbjct: 376 YAAFASRKNGKIISKDLMRQHVFALQDVELNVLFKKWQLSHQ 417
>gi|194377976|dbj|BAG63351.1| unnamed protein product [Homo sapiens]
Length = 488
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 239 QWKGQFTTVRKSGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 298
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +R+ L H
Sbjct: 299 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHML 354
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 355 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 410
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 411 ACLPDAKTQRLFFKWQQGHQ 430
>gi|395504265|ref|XP_003756476.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Sarcophilus
harrisii]
Length = 580
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKA 302
I + KW + + +SG+C +CG L + ++ E E Q V ++ +
Sbjct: 327 IPEKKWKGESVIIHKSGQCLACGRMLESIHLNSEEYEFLKQRVLKDILDGGDQYRKTTPK 386
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
+ F+ +++ ++ ++DG N+ T+ + + + ++ + + + + +++
Sbjct: 387 EINRFEKFIKSCPPFDIVIDGLNV-------TKMFPKIRESETLLDIVSQLTKQNFQVLV 439
Query: 363 LHNKRL---RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTN 417
L K + RS W H+N + + + S DD + LYA + +C +T
Sbjct: 440 LGRKHMLNGRSRW----HKNEMTAVQNMAYCFFADNVSEDDAFLLYATLHSGNQCRFLTR 495
Query: 418 DEMRDH---IFELLGSNFFLKWKERHQ 441
D MRDH + + F +W++ HQ
Sbjct: 496 DLMRDHKACLTDEKTQQLFFRWQQGHQ 522
>gi|375493513|ref|NP_001243607.1| mitochondrial ribonuclease P protein 3 isoform 2 [Homo sapiens]
gi|119586283|gb|EAW65879.1| KIAA0391, isoform CRA_b [Homo sapiens]
gi|119586285|gb|EAW65881.1| KIAA0391, isoform CRA_b [Homo sapiens]
gi|119586287|gb|EAW65883.1| KIAA0391, isoform CRA_b [Homo sapiens]
gi|168278599|dbj|BAG11179.1| KIAA0391 protein [synthetic construct]
Length = 567
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 328 ESGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPP 387
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ E L VV +L +R+ L H R S W
Sbjct: 388 FDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWS--- 440
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
R+ +EE ++ + S DD + LYA + C +T D MRDH + +
Sbjct: 441 -RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQR 499
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 LFFKWQQGHQ 509
>gi|40788241|dbj|BAA20845.2| KIAA0391 [Homo sapiens]
Length = 571
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 332 ESGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPP 391
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ E L VV +L +R+ L H R S W
Sbjct: 392 FDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWS--- 444
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
R+ +EE ++ + S DD + LYA + C +T D MRDH + +
Sbjct: 445 -RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQR 503
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 504 LFFKWQQGHQ 513
>gi|410212502|gb|JAA03470.1| KIAA0391 [Pan troglodytes]
gi|410252808|gb|JAA14371.1| KIAA0391 [Pan troglodytes]
gi|410301992|gb|JAA29596.1| KIAA0391 [Pan troglodytes]
gi|410334691|gb|JAA36292.1| KIAA0391 [Pan troglodytes]
Length = 583
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C +CG + + + E E + ++ +
Sbjct: 334 QWKGQFTTVRKSGQCSACGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +++ L H
Sbjct: 394 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKQNLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 450 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQ 525
>gi|332842138|ref|XP_001138582.2| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 3 [Pan
troglodytes]
Length = 488
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C +CG + + + E E + ++ +
Sbjct: 239 QWKGQFTTVRKSGQCSACGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 298
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +++ L H
Sbjct: 299 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKQNLRLLVLGRKHML 354
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 355 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 410
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 411 ACLPDAKTQRLFFKWQQGHQ 430
>gi|195432522|ref|XP_002064272.1| GK20077 [Drosophila willistoni]
gi|194160357|gb|EDW75258.1| GK20077 [Drosophila willistoni]
Length = 528
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 257 KRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSEFQDW 310
K V+ GKC C L V I D + ++ +S + ++ F+ +
Sbjct: 279 KSSQVNRLGKCLHCHQHLQPVAISDEQFQQLRESFLEKVLIRHDVFQKSTPEEVERFKAY 338
Query: 311 LEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDA-VVKKLYERSGNKWPLVILHNKRLR 369
+E+ Y+ ++DG N+ Y + + QL A VV+ ER +++L + +R
Sbjct: 339 VERTLPYDCVIDGLNVA-YSMGTKKSPAQLAQLVANVVRYFRERRKR---VLVLGRQHMR 394
Query: 370 SLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFEL 427
W ++ + L++ + S+DD + LYA +K + D MR H L
Sbjct: 395 Q-WS----KSAMHYIQANASLFLAQNLSHDDPFLLYATLKSGQDTDFFSRDLMRSHA-HL 448
Query: 428 LGSNF---FLKWKERHQ 441
LG + F +W++ HQ
Sbjct: 449 LGPDLKPIFRRWQQEHQ 465
>gi|194763527|ref|XP_001963884.1| GF21257 [Drosophila ananassae]
gi|190618809|gb|EDV34333.1| GF21257 [Drosophila ananassae]
Length = 544
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQS------VAALAMEREVKANFSEFQDWLEKNANYE 318
GKC SC V I D + ++S + + +R + F+ ++++ A Y+
Sbjct: 294 GKCQSCQQHFQPVAISDEQFRMLSESFLERVLIRSDVFQRSTPKEVASFKKFVDRTAPYD 353
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHR 378
++DG N+ Y + + +L A V + R NK LV L + +R+ + H
Sbjct: 354 CVIDGLNVA-YSTGTKKSPKQLAKLVATVVSHF-REQNKRVLV-LGREHMRNWCKQSMHY 410
Query: 379 NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLG--SNFFL 434
L++T + S+DD + LYA +K + D MR H F L F
Sbjct: 411 -----VQSNASLFLTNNLSHDDPFLLYATLKSGSDTDFFSRDLMRSHAFHLGPEMKPIFR 465
Query: 435 KWKERHQ 441
+W+++HQ
Sbjct: 466 QWQQQHQ 472
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ S + G +E ++Y +++
Sbjct: 293 KQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRM 337
>gi|347966896|ref|XP_003435980.1| AGAP001968-PB [Anopheles gambiae str. PEST]
gi|333469851|gb|EGK97433.1| AGAP001968-PB [Anopheles gambiae str. PEST]
Length = 536
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 33/214 (15%)
Query: 256 VKRGSVDESGKCCSCGDQLACV----DIDDAETERFAQSVAA--LAMEREVKANFSEFQD 309
V+ + + GKC SC L+ + D+ + ++F +V R + FQ
Sbjct: 270 VQETRITDGGKCSSCKGTLSSIVVSEDMFQSLRDKFLTAVLINKEIFNRTTPEELNRFQA 329
Query: 310 WLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLR 369
+L K Y+ ++DG N+ N Q+ AVV+ Y R + V++ ++
Sbjct: 330 FLAKTLPYDVVIDGLNVAFSSGNQKSPIVYAQQVAAVVRH-YVRQKKR---VLVIGRKHM 385
Query: 370 SLWENPSHRNLVEE-----------WN----EKGVLYMT--PHGSNDDWYWLYAAVK--L 410
W + + + E W E V Y T P S DD + LYAA++
Sbjct: 386 DKWRSREMKYIRENSFLFLTDDLYVWVSGLLESTVTYFTFAPFRSQDDPFLLYAALESGP 445
Query: 411 RCLLVTNDEMRDHIFELLG---SNFFLKWKERHQ 441
+ + D MR H F +LG S F +W++ HQ
Sbjct: 446 KTDFFSRDLMRKHSF-MLGNELSGVFKRWQQEHQ 478
>gi|432940085|ref|XP_004082710.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Oryzias
latipes]
Length = 616
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKA 302
+ KW S G C CG +L + + E + + V A ++ +
Sbjct: 362 LSSQKWTGSWTSPRSKGLCGCCGSELESIQLTAEEYQELKEKVIADVIQGRDVFKKTTPE 421
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
F++++ + ++ +VDG N+ ++ T+ + L AVV +L + L
Sbjct: 422 ELEHFKEFVRRKPPFDVVVDGLNVANVNRDKTKLSHT---LLAVVSELKHQGLTILVLGR 478
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEM 420
H R W+ + +L++ +K + T + S DD + LYA + C V+ D M
Sbjct: 479 KHMLRPSISWDR-KNMSLIQ---QKAHCFFTDNISEDDPFLLYATLHSGYHCRFVSRDLM 534
Query: 421 RDH---IFELLGSNFFLKWKERHQ 441
RDH + + F KW+ HQ
Sbjct: 535 RDHKACLPDGATRRLFFKWQRGHQ 558
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSA 81
+ ++ +Q+C D + ++LY+ + +++ H F+ ++ LC K+
Sbjct: 274 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGK 324
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 325 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 383
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + GL++ ++L+ + GRV++ + +++
Sbjct: 384 VVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 440
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML+N ++PN + T++ D A + K+M ++ ++ P L
Sbjct: 218 KESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A ++ + M + GL ++ L+ S + G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 198 L 198
+
Sbjct: 337 M 337
>gi|301110951|ref|XP_002904555.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095872|gb|EEY53924.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 545
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 50/220 (22%)
Query: 266 KCCSCGDQLACVDIDDAETERFAQSV----AALAMEREVKANFSEFQDWL---------- 311
KC CG L + + E E ++ + +A + VK F+ WL
Sbjct: 242 KCPCCGHALNKQGMSEQEREHMLTALESRRSKMAPGKLVKEFLDPFRVWLMLRHETFQLQ 301
Query: 312 --------EKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS--------- 354
K +Y ++DG NI QNF G + + +D V ++L +
Sbjct: 302 TLAENPRSSKPLHY--VLDGPNIAYINQNFEAGTYRLDHVDYVARELQAQGHLVSITMPT 359
Query: 355 ---GNKWPLVILHNKRLRSLWEN---------PSHRNLVEEWNEKGVLYMTPHGS-NDDW 401
+K+ LV + NK R + P + +V W E+ +++ +DD
Sbjct: 360 NYLADKF-LVRIRNKHFRDMRRQGKYATRERTPEEKAIVARWKEEDMIFSCRTDFLSDDL 418
Query: 402 YWLYAAVKL--RCLLVTNDEMRDHI-FELLGSNFFLKWKE 438
+WLYA+V L +VTND+ RDH + + +WK+
Sbjct: 419 FWLYASVLLGREGRVVTNDQGRDHTGAPSISMDLIARWKD 458
>gi|403263942|ref|XP_003924257.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Saimiri
boliviensis boliviensis]
Length = 581
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + + E + ++ +
Sbjct: 332 QWKGQFTTIQKSGQCSGCGKTIESIQLSPEDYEFLKGRIMRDVIDGGDQYRKTTPQELKR 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L H
Sbjct: 392 FENFVKSCPPFDIVIDGLNVA---KMFPKARESKLLLN-VVSQLAKQNLRLLVLGRKHML 447
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDHI 424
R S W ++ +EE ++ + + S DD + LYA + C +TND MRDH
Sbjct: 448 RKSSQWR----KDEMEEVQKQARCFFADNISKDDPFLLYATLHSGNHCKFITNDLMRDHK 503
Query: 425 FELLGSN---FFLKWKERHQ 441
L +N F KW++ HQ
Sbjct: 504 ACLPDANTQRLFFKWQQGHQ 523
>gi|440909280|gb|ELR59204.1| Mitochondrial ribonuclease P protein 3 [Bos grunniens mutus]
Length = 584
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 335 QWKGQFTTIQQSGQCLGCGKTVESIHLSSEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 394
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ + ++ ++DG N+ + F + S L+ VV L +++ L +L
Sbjct: 395 FQNFVKYHPPFDVVIDGLNVA---KMFPKARESQVLLN-VVSHLAKQN-----LQVLVLG 445
Query: 367 RLRSLWENPSHRNL-VEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH 423
R L +N R + +E+ ++ + + S DD + LYA + C +T D MRDH
Sbjct: 446 RKHMLTQNSRWRRVEMEKMQKQASFFFADNISEDDPFLLYATLHSGNHCKFITKDLMRDH 505
Query: 424 ---IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 KACLPDAKTQRLFFKWQQGHQ 526
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSA 81
+ ++ +Q+C D + ++LY+ + +++ H F+ ++ LC K+
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGK 342
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 401
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + GL++ ++L+ + GRV++ + +++
Sbjct: 402 VVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
>gi|449504396|ref|XP_002199796.2| PREDICTED: mitochondrial ribonuclease P protein 3 [Taeniopygia
guttata]
Length = 480
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 252 GKWVVKRGSVDESGKCCSCGDQLACVDIDDAE----TERFAQSV--AALAMEREVKANFS 305
G W + +V +SG+C C QL ++ + E +ER + V +
Sbjct: 230 GNWRGQLTNVKDSGQCPVCKHQLEESNLTEEEYSHLSERILKDVIHGTDTFRKTSPKELE 289
Query: 306 EFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHN 365
FQ ++E ++ ++DG N+ + + + ++ + K+ L++L
Sbjct: 290 AFQTFVENRLPFDIVIDGLNVSHIKSRRMQCENLLDAVNCLAKE-------NARLLVLGR 342
Query: 366 KRL---RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEM 420
K + S W+ R +V+E K + + S DD + LYA ++ C VT D +
Sbjct: 343 KHMLMNSSNWK----REIVKEMQNKADFFFAENISEDDAFLLYATLRSGKHCRFVTRDFL 398
Query: 421 RDH---IFELLGSNFFLKWKERHQ 441
RDH + + L + F KW+ HQ
Sbjct: 399 RDHKACLSDSLTRHLFRKWQRGHQ 422
>gi|301611732|ref|XP_002935379.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Xenopus
(Silurana) tropicalis]
Length = 583
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 23/201 (11%)
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAE----TERFAQSV--AALAMEREVKANFSEF 307
W +V E+G C C QL + + E + F QSV + EF
Sbjct: 335 WRGHLSTVSENGHCQVCKQQLESIHLMPEEYRTLKDVFLQSVIEGHDTFRKTTPQELQEF 394
Query: 308 QDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKR 367
+ ++ + Y+ +VDG N+ T+G S LD V SG K LV+
Sbjct: 395 RQFVRSHPPYDIVVDGLNVAYIT---TKGRGSQTLLDIVSGLC---SGGKRVLVLGRKHM 448
Query: 368 LRS--LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDH 423
L+ W+ H L++ ++ + + S DD + LYA++ C +T D MRDH
Sbjct: 449 LQESRTWQR-RHMQLLQ---QRADCFFIDNISEDDPFLLYASLNSGSHCCFLTRDLMRDH 504
Query: 424 ---IFELLGSNFFLKWKERHQ 441
+ + F KW+ HQ
Sbjct: 505 KSCLPDAQTKRLFFKWQRGHQ 525
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN + T++ D A + K+M ++ ++ P L
Sbjct: 218 KESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A ++ + M + GL ++ L+ S + G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKR 336
Query: 198 L 198
+
Sbjct: 337 M 337
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
RVF +M+ V+PN A+ ++ ++ K+ + A V+ + M E VP + TY+ +
Sbjct: 299 RVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRG 358
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C + E+A E MG GL Q +++ + G VEK + K+
Sbjct: 359 LCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKM 410
>gi|332229154|ref|XP_003263756.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 1
[Nomascus leucogenys]
Length = 583
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C +CG + + + E E + ++ +
Sbjct: 334 QWKGQFTTVQKSGQCSACGKTIESIQLSPEEYEYLKGKIMRDVIDGGDQYKKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E F L VV +L +++ L H
Sbjct: 394 FENFIKSCPPFDIVIDGLNVAKMFPKARESQF----LLNVVSQLAKQNLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W ++ ++E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 450 RQCSQWR----KDEMKEVQKQASCFFADNISEDDPFLLYATLHSGNHCRFITKDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQ 525
>gi|449274768|gb|EMC83846.1| Mitochondrial ribonuclease P protein 3, partial [Columba livia]
Length = 477
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAE----TERFAQSV--AALAMEREVKA 302
I G W ++ +SG+C C QL ++ + E ER + V +
Sbjct: 215 IPGGNWRGHLTNIKDSGQCPVCNHQLEDSNLTEEEYKCLRERIIKDVIHGTDTFRKTSPQ 274
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
F FQ ++E ++ ++DG N+ + + ++ + K GN LV+
Sbjct: 275 EFEAFQTFVENRLPFDIVIDGLNVSHIKPRKMQCENLFEAVNCLAK------GNARLLVL 328
Query: 363 LHNKRLRSLWENPS-HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDE 419
R L +P+ R +++E K + + S DD + LYA ++ C VT D
Sbjct: 329 ---GRKHMLSNSPNWKREVMKEMQNKADFFFAENISEDDTFLLYATLRSGKHCKFVTRDF 385
Query: 420 MRDH---IFELLGSNFFLKWKERHQ 441
+RDH + + + + F KW+ HQ
Sbjct: 386 LRDHKACLSDSVTRHLFRKWQRGHQ 410
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 174 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 224
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 225 LVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 283
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ AL+ + G ++ +++ +++
Sbjct: 284 HDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRM 325
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + H+ ++ ++ ++ L+ LC +S D + K +FD+ML
Sbjct: 183 KLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHK---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ P TY+ ++ C+ +
Sbjct: 234 DRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQ-GFSPDXITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+A ++ + M + GL ++ L+ S + G +E ++Y +++
Sbjct: 293 XQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRM 337
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
P ET I L K + A+ +++ + LR + +N+LL +K
Sbjct: 409 PTIETYTSI-LDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLL--------SGLAKA 459
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+ + + D+ML+N V+PNE S T++ A D + AF + +RM E N+ +
Sbjct: 460 RQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE-NLAIDIVA 518
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y L C++ ++A EV + + GL + +L A G + K L+ ++
Sbjct: 519 YGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQ 578
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + ++M ++ +++P L TY+ ++ C+ +
Sbjct: 234 BNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A+++ + M + GL ++ L+ + G +E ++Y +++
Sbjct: 293 KQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRM 337
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +K+
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKM 337
>gi|149692913|ref|XP_001491097.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Equus
caballus]
Length = 584
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + ++ +
Sbjct: 335 QWKGQFTTIQKSGQCLGCGKTIESIRLSPEEYEFLKGKILRDVIDGGDQYKKTTPQELKR 394
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ + F + S LD VV +L +++ L H
Sbjct: 395 FQNFVKHCPPFDIVIDGLNVA---KMFPKARESQVLLD-VVSQLAKQNLRLLVLGRKHML 450
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 451 RQGSRWR----RDEMEMVQKQASCFFADNISEDDPFLLYATLHSGNHCKFITKDLMRDHK 506
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 507 ACLPDAKTQRLFFKWQQGHQ 526
>gi|301774893|ref|XP_002922861.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Ailuropoda
melanoleuca]
gi|281342881|gb|EFB18465.1| hypothetical protein PANDA_011891 [Ailuropoda melanoleuca]
Length = 581
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETE----RFAQSV--AALAMEREVKANFSE 306
+W + +V ESG C CG + + + E E +F + V ++
Sbjct: 332 QWKGQFTTVKESGHCLGCGKAIESIHLSPEEYEFLKGKFMRDVIDGGDQYKKTTPQELER 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ + F + S L VV +L +++ L++L K
Sbjct: 392 FQNFVKSRPPFDIVIDGLNVA---KTFPKARESQVLL-GVVSQLAKQNLQ---LLVLGRK 444
Query: 367 RLRSLWENPSHR-NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH 423
+ L +N R + +++ ++ + + S DD + LYA + C +T D MRDH
Sbjct: 445 HM--LTQNSKWRKDEMKKVQQQASCFFADNISEDDPFLLYATLHSGNHCRFITKDLMRDH 502
Query: 424 IFELLGSN---FFLKWKERHQ 441
L + F KW++ HQ
Sbjct: 503 KASLRDAKTQRLFFKWQQGHQ 523
>gi|349604148|gb|AEP99782.1| Mitochondrial ribonuclease P protein 3-like protein, partial [Equus
caballus]
Length = 262
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + ++ +
Sbjct: 13 QWKGQFTTIQKSGQCLGCGKTIESIRLSPEEYEFLKGKILRDVIDGGDQYKKTTPQELKR 72
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ + F + S LD VV +L +++ L H
Sbjct: 73 FQNFVKHCPPFDIVIDGLNVA---KMFPKARESQVLLD-VVSQLAKQNLRLLVLGRKHML 128
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 129 RQGSRWR----RDEMEMVQKQASCFFADNISEDDPFLLYATLHSGNHCKFITKDLMRDHK 184
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 185 ACLPDAKTQRLFFKWQQGHQ 204
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
++A ++ + M + GL ++ L+ S + G +E ++Y
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
>gi|348516029|ref|XP_003445542.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Oreochromis
niloticus]
Length = 617
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + G C SCG +L + + E ++ V +E +
Sbjct: 365 EWTGNWTTATPKGVCRSCGSELESIQLTAEEYQQLKDRVMTDIIEGQDVFTKTTPEELQR 424
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL--- 363
F+ ++++ ++ +VDG N+ ++ ++ + L VV +L +R G L +L
Sbjct: 425 FKLFVKRKPVFDVVVDGLNVANINKDKSKQSAT---LLVVVSELVDRQG----LTVLVLG 477
Query: 364 --HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDE 419
H R W+ + NL++ +K + T + S DD + LYA + C V+ D
Sbjct: 478 RKHMLRPSRSWDR-HNMNLIQ---QKAHCFFTDNISEDDPFLLYATLHSGNHCRFVSRDL 533
Query: 420 MRDH---IFELLGSNFFLKWKERHQ 441
MRDH + + F KW+ HQ
Sbjct: 534 MRDHKACLPDGATRRLFFKWQRGHQ 558
>gi|441595333|ref|XP_004087233.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Nomascus
leucogenys]
Length = 436
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C +CG + + + E E + ++ +
Sbjct: 187 QWKGQFTTVQKSGQCSACGKTIESIQLSPEEYEYLKGKIMRDVIDGGDQYKKTTPQELKR 246
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E F L VV +L +++ L H
Sbjct: 247 FENFIKSCPPFDIVIDGLNVAKMFPKARESQF----LLNVVSQLAKQNLRLLVLGRKHML 302
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W ++ ++E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 303 RQCSQWR----KDEMKEVQKQASCFFADNISEDDPFLLYATLHSGNHCRFITKDLMRDHK 358
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 359 ACLPDAKTQRLFFKWQQGHQ 378
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 184 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLDKG 234
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ E ++A
Sbjct: 235 MVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGELKQA 293
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G +E +++ +++
Sbjct: 294 HDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRM 335
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 174 DLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 224
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
+IPN + T++ D A + KRM ++ +++P L TY+ ++ C+N + ++A
Sbjct: 225 LIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ-SLLPDLITYNTLIYGLCKNGDLKQA 283
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL-RSTVRCVNEETGKIIED 215
+++ + M + GL ++ L+ + G ++ +++ +++ + +R + +I
Sbjct: 284 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISG 343
Query: 216 WFS-GQKVN-----------GVSCDLG---LVKNAVLKNGGGWHG 245
GQ V+ G+ D+G ++ N K G W G
Sbjct: 344 LCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKG 388
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLDKG 225
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 226 LVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 284
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G +E +++ +++
Sbjct: 285 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 326
>gi|291403736|ref|XP_002717992.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
Length = 587
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ ESG+C CG + + + E E + ++ +
Sbjct: 335 QWKGQFTTIQESGQCLGCGKAMESIHLSPDEYEFLKTKIMRDVIDGGDQYRKTTPQELQR 394
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +++ L++L K
Sbjct: 395 FENFVKSRPPFDIVIDGLNVAKMFPKARESQV----LLGVVSQLAKQNLR---LLVLGRK 447
Query: 367 RL---RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
+ RS W ++ +E+ ++ + S DD + LYA + C +T D MR
Sbjct: 448 HMLTQRSRWT----KDEMEKIRKQASCFFADDISEDDPFLLYATLHSGNHCKFITKDLMR 503
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 504 DHKACLPDAKTQRLFFKWQQGHQ 526
>gi|397501121|ref|XP_003821243.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Pan paniscus]
Length = 488
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKA 302
I +W + +V +SG+C +CG + + + E + ++ +
Sbjct: 235 IPGKQWKGQFTTVRKSGQCSACGKTIESIQLSPEEYGCLKGKIMRDVIDGGDQYRKTTPQ 294
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
F+++++ ++ ++DG N+ E L VV +L +++ L
Sbjct: 295 ELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKQNLRLLVLGR 350
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEM 420
H R S W R+ +EE ++ + S DD + LYA + C +T D M
Sbjct: 351 KHMLRRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLM 406
Query: 421 RDH---IFELLGSNFFLKWKERHQ 441
RDH + + F KW++ HQ
Sbjct: 407 RDHKACLPDAKTQRLFFKWQQGHQ 430
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + +M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ S + G +E ++Y +++
Sbjct: 293 KQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRM 337
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+++ +ML+ N + N+ +V + AR D AF LIK M + VP TY +
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITF 232
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C + EKA+ + + M ++G++ + L+ + G +E+ +++RS
Sbjct: 233 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287
>gi|426248382|ref|XP_004017942.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 1 [Ovis
aries]
Length = 485
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 236 QWKGQFTTIQQSGQCLGCGKTVESIHLSSEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 295
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ + F + S L+ VV L +++ L +L
Sbjct: 296 FQNFVKYCPPFDVVIDGLNVA---KMFPKARESQVLLN-VVSHLAKQN-----LQVLVLG 346
Query: 367 RLRSLWENPSHRNL-VEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH 423
R L +N R + +E+ ++ + + S DD + LYA + C +T D MRDH
Sbjct: 347 RKHMLTQNSRWRRVEMEKMQKQASFFFADNISEDDPFLLYATLHSGNHCKFITKDLMRDH 406
Query: 424 ---IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 407 RACLPDAKTQRLFFKWQQGHQ 427
>gi|270005388|gb|EFA01836.1| hypothetical protein TcasGA2_TC007438 [Tribolium castaneum]
Length = 489
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSE 306
K +V+ +++ G C SC +LA + +E + Q + + R S+
Sbjct: 240 KMLVRSSAINYKGVCKSCNSKLAQFHLTQSEFDEIKQKIIDNVIIGKDVYARTTAQELSK 299
Query: 307 FQDWLEKNANYEAIVDGANI----GLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
F++++ K ++ ++DG N+ GL Q G + +VV ++ V+
Sbjct: 300 FKNFVSKMPKFDVVIDGLNVAYSAGLKQPAQVTSGL----VQSVVAHFVDQGKE----VL 351
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEM 420
L + + W RN + E +++T + S DD Y LY A+ ++VT D M
Sbjct: 352 LLGRSHMNRWP----RNNWDYVKENATIFLTENLSQDDPYLLYCALHSGKDTIIVTKDLM 407
Query: 421 RDHIFEL 427
R H F L
Sbjct: 408 RGHKFLL 414
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|91080915|ref|XP_973846.1| PREDICTED: similar to SD17694p [Tribolium castaneum]
Length = 473
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAM------EREVKANFSE 306
K +V+ +++ G C SC +LA + +E + Q + + R S+
Sbjct: 224 KMLVRSSAINYKGVCKSCNSKLAQFHLTQSEFDEIKQKIIDNVIIGKDVYARTTAQELSK 283
Query: 307 FQDWLEKNANYEAIVDGANI----GLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
F++++ K ++ ++DG N+ GL Q G + +VV ++ V+
Sbjct: 284 FKNFVSKMPKFDVVIDGLNVAYSAGLKQPAQVTSGL----VQSVVAHFVDQGKE----VL 335
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEM 420
L + + W RN + E +++T + S DD Y LY A+ ++VT D M
Sbjct: 336 LLGRSHMNRWP----RNNWDYVKENATIFLTENLSQDDPYLLYCALHSGKDTIIVTKDLM 391
Query: 421 RDHIFEL 427
R H F L
Sbjct: 392 RGHKFLL 398
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|417402949|gb|JAA48304.1| Putative mitochondrial ribonuclease p protein 3 [Desmodus rotundus]
Length = 579
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 330 QWKGQFTTIQKSGQCLGCGKTIESIHLSPEEYEFLKRKILRDVIDGGDQYRKTTPQELQR 389
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ E L VV L +++ L H
Sbjct: 390 FQNFVKYCPPFDIVIDGLNVAKMFPKARESQV----LLGVVSHLAKKNLRVLVLGRKHML 445
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R+ W+ +N +EE + + + S DD + LYA + C +T D +RDH
Sbjct: 446 NSRAQWK----KNEMEEVQKLASCFFADNISEDDPFLLYATLHSGNHCKFITKDLLRDHK 501
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + + F KW++ HQ
Sbjct: 502 ACLPDAKTQHLFFKWQQGHQ 521
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
N LIN Q K DL+ A SL+ ++ + + F +L+ KD ++
Sbjct: 439 NSLINGQC--KFGDLSAAESLFIEMTNKGVEPTATTFTSLI--------SGYCKDLQVQK 488
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
F+++++M+ N + PN + T++ S N A L + E + P TY+ +
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV-ERKIKPTEVTYNVLI 547
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC 204
+C + + +KA+E+ E M GL + L+ TGRV K ++ L
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607
Query: 205 VNE-----------ETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGG 241
+NE + G+++E + ++ ++ LV +AVL +G
Sbjct: 608 LNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K D T L + H Q LR + ++Y S D SK+ + + F +D M++
Sbjct: 657 KQPDRKTFFDLLKDMHDQGLRP-----DNVIY---TSMIDTYSKEGSFKKAFECWDLMVT 708
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
PN + T++ + D A +L KRM NV P TY CF +NL E
Sbjct: 709 EECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAA-NVPPNSITYG----CFLDNLTKE 763
Query: 155 KAYEVEEHMGL 165
++E +GL
Sbjct: 764 G--NMKEAIGL 772
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G ++ D+M+ P EA+V+ + + D A+ L+ ++ F VP L Y+ +
Sbjct: 314 GIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVG-RFGFVPNLFVYNALI 372
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C+ + +KA + +M LM L + L+ +GR++ Y ++
Sbjct: 373 NSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM 426
>gi|332229156|ref|XP_003263757.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 2
[Nomascus leucogenys]
Length = 567
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C +CG + + + E E + ++ + F+++++
Sbjct: 328 ESGQCSACGKTIESIQLSPEEYEYLKGKIMRDVIDGGDQYKKTTPQELKRFENFIKSCPP 387
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ E F L VV +L +++ L H R S W
Sbjct: 388 FDIVIDGLNVAKMFPKARESQF----LLNVVSQLAKQNLRLLVLGRKHMLRQCSQWR--- 440
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
++ ++E ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 441 -KDEMKEVQKQASCFFADNISEDDPFLLYATLHSGNHCRFITKDLMRDHKACLPDAKTQR 499
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 LFFKWQQGHQ 509
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+++ +ML+ N + N+ +V + AR D AF LIK M + VP TY +
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITF 297
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C + EKA+ + + M ++G++ + L+ + G +E+ +++RS
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
Query: 15 KRKTNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K NPNP N L++ S ++D A L + +N +
Sbjct: 170 KEGCNPNPSLFNSLVH--SYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEE 227
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
PS AL +V+++ML+++ + N+ + + AR D AF +IK M +
Sbjct: 228 LPSPDLLALAE--KVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGK-GF 284
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
VP TY + CE ++ EKA+ + + M +G++ + L+ + G +E+
Sbjct: 285 VPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARS 344
Query: 194 YLQKLRS 200
+ ++RS
Sbjct: 345 WFDEMRS 351
>gi|363734112|ref|XP_421241.2| PREDICTED: mitochondrial ribonuclease P protein 3 [Gallus gallus]
Length = 591
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAE----TERFAQSV--AALAMEREVKANFSE 306
KW ++ +SG+C C QL ++ + E ER + V + F
Sbjct: 339 KWKGHLTNIKDSGQCPVCNHQLEDSELTEEEYNNLRERIIRDVIHGTDTFRKTSPQEFEA 398
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ ++E ++ ++DG NI + ++ + K Y R L++L K
Sbjct: 399 FQTFVENRLPFDIVIDGLNISHIMPRKVQCENLFEAVNCLAKD-YAR------LLVLGRK 451
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDH- 423
+ + N R +++E K + + S DD + LYA ++ C VT D +RDH
Sbjct: 452 HMLTNSFN-WKREVMKEMQNKADFFFAENISEDDAFLLYATLRSGKHCKFVTRDFLRDHK 510
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + + + F KW+ HQ
Sbjct: 511 ACLSDSVTRHLFRKWQRGHQ 530
>gi|327263624|ref|XP_003216619.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Anolis
carolinensis]
Length = 580
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 23/211 (10%)
Query: 244 HGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSV------AALAME 297
H I KW +V SGKC SC L +++ + E + + +
Sbjct: 323 HWFESIPGEKWKGNLTTVKNSGKCPSCEQFLESINLTEEEYDILKEKIIKDVIHGTDTFR 382
Query: 298 REVKANFSEFQDWLEKNANYEAIVDGANIG--LYQQNFTEGGFSVPQLDAVVKKLYERSG 355
+ FQ ++ + ++ ++DG N+ ++ N ++ L VV L +++
Sbjct: 383 KTTPQELEVFQRFVNQRPPFDIVIDGLNVARVCHKNNPSQ------TLLDVVNHLVQQNL 436
Query: 356 NKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCL 413
L++L K + + + N+V +K + T + S DD + LYA + C
Sbjct: 437 R---LLVLGRKHMLNGSRQWNRNNMV-AMQKKADFFFTDNVSEDDPFLLYATLHSGSHCK 492
Query: 414 LVTNDEMRDH---IFELLGSNFFLKWKERHQ 441
VT D +RDH + + L F KW+ HQ
Sbjct: 493 FVTRDLLRDHKACLSDSLTRRLFFKWQRGHQ 523
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
D+ L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 175 DMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------MFDEMLDKG 225
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 226 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLXPDLITYNTLIYGLCKKGDLKQA 284
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL-RSTVRCVNEETGKII-- 213
+++ + M + GL ++ L+ + G +E +++ +++ + +R + +I
Sbjct: 285 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISG 344
Query: 214 ----EDWFSGQKV------NGVSCDLG---LVKNAVLKNGGGWHG 245
E + +KV G+ D G ++ N K G W G
Sbjct: 345 LCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTG 389
>gi|297694927|ref|XP_002824715.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 2 [Pongo
abelii]
Length = 583
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 334 QWKGQFTTVQKSGRCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPWELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E F L VV +L +++ L H
Sbjct: 394 FKNFIKSCPPFDVVIDGLNVAKMFPKVRESQF----LLNVVSQLAKQNLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W ++ ++E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 450 RKCSQWS----QDEMKEVQKQASCFFADNISEDDPFLLYATLHSGNHCRFITRDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQ 525
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ + ++ ++ L+ LC +S D ++K +FD+ML
Sbjct: 192 DLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANK---------LFDEMLEKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQ-SLLPDLVTYNALIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
+++ + M + GL ++ L+ + G ++ +++
Sbjct: 302 HDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+++ +ML+ N + N+ +V + AR D AF LIK M + VP TY +
Sbjct: 408 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITF 466
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C + EKA+ + + M ++G++ + L+ + G +E+ +++RS
Sbjct: 467 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 521
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+++ +ML+ N + N+ +V + AR D AF LIK M + VP TY +
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITF 297
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C + EKA+ + + M ++G++ + L+ + G +E+ +++RS
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANA---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + ++M ++ +++P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 15/186 (8%)
Query: 16 RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATD 74
R P+ + ++ +Q+C D +SLY L + H ++ ++ LC
Sbjct: 231 RNVAPD-KITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLC------ 283
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
K+ G+ VF++M+ N A T++ A + A +L +RM E +
Sbjct: 284 ---KEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKE-GLE 339
Query: 135 PRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV---EKV 191
P + TY + C C++ ++A E E + G+++ ++L+ + GRV EK+
Sbjct: 340 PDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKL 399
Query: 192 YQYLQK 197
++ + K
Sbjct: 400 FEEMVK 405
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML +IPN + T++ D+A + KRM ++ +++P L
Sbjct: 221 KESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQ-SLLPDL 279
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A+++ + M + GL ++ L+ + G ++ +++ ++
Sbjct: 280 ITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKR 339
Query: 198 L 198
+
Sbjct: 340 M 340
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + + +F++ML N ++PN + T++ D A + K+M ++ ++ P L
Sbjct: 218 KESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A ++ + M + GL ++ L+ S + G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKR 336
Query: 198 L 198
+
Sbjct: 337 M 337
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRM 337
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANG---------LFDEMLDKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G +E +++ +++
Sbjct: 296 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 337
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+M+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMI 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN + T++ D A + K++ ++ + P L
Sbjct: 218 KESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQ-GLSPDL 276
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ FC+ + ++ ++ + M + GL ++ L+ S + G +E ++Y +K
Sbjct: 277 ITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKK 336
Query: 198 L 198
+
Sbjct: 337 M 337
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H ++ ++ ++ L+ LC +S + +++ +FD+M+ N
Sbjct: 186 DLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANE---------LFDEMIGNG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A K M + P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQ-GFSPDLITYNTLIYGLCKEGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ + M + GL ++ L+ S + G +E ++Y +++
Sbjct: 296 QDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRM 337
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 173 DLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLDKG 223
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ + C+ + ++A
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLTYGLCKKGDLKQA 282
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G +E +++ +++
Sbjct: 283 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRM 324
>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
Length = 731
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C ++ +L A +Y S+ ++ FN+L+ C S A++ F VF
Sbjct: 158 IDGCARTGELAKAFGIYRIMLSKKIKPDRVIFNSLINACGRSG--------AVKRAFEVF 209
Query: 90 DQMLSNNVI-PNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTYDPALFCF 147
++ S N I PN ++ S+ + DGD A+ + M P Y A+
Sbjct: 210 TELKSENPINPNHVTMCSLIDACSKAGDGDSAYEVYTMMRKRGIGGCP--EPYTAAVHAC 267
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ E+A+ + + M G+ ++ +AL+ V+ +++ + LQ++
Sbjct: 268 SSSGNLERAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDCAFDVLQEV 318
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
NPN T + + +C+K+ D +A +Y + + + A ++ CS S
Sbjct: 219 NPNHVTMCSL-IDACSKAGDGDSAYEVYTMMRKRGIGGCPEPYTAAVHACSSSGN----- 272
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
L F ++D M + V P+E +++ +A + D AF +++ + ++++VP
Sbjct: 273 ---LERAFSIYDDMKKDGVKPDEIFFSALIDVAGHASKIDCAFDVLQEV-EKYSLVPGPV 328
Query: 139 TYDPALFCFCENLEA-EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
+ +L C N EKA + E++ +G+ + AL+ + + Q L++
Sbjct: 329 IFS-SLMGVCSNTGNWEKAIFLYENIQAVGIRPSVSTLNALMTALCRGKQFQNALQSLEE 387
Query: 198 LRSTVRCVNEETGKIIEDWFSGQKVNGVSCDL-------GLVKNAVL 237
L+ N+ T I+ + + G++ +L G+V N +
Sbjct: 388 LKEAGVSPNQLTYSILLEACEKENEAGIALNLYTHAIADGIVPNLAM 434
>gi|444722485|gb|ELW63177.1| Mitochondrial ribonuclease P protein 3 [Tupaia chinensis]
Length = 570
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 331 ESGQCLGCGKTIESIHLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELQRFENFVKSCPP 390
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRL---RSLWE 373
++ ++DG N+ E L VV +L +++ L++L K + RS W
Sbjct: 391 FDIVIDGLNVAKMFPKARESEV----LSNVVSQLAKQNLR---LLVLGRKHMLTQRSRWR 443
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELL 428
+N +E+ ++ + S DD + LYA + C +T D MRDH + +
Sbjct: 444 ----KNEMEKIQKQASCFFADDISEDDPFLLYATLHSGNHCKFITKDLMRDHKACLPDAK 499
Query: 429 GSNFFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 TQRLFFKWQQGHQ 512
>gi|328908723|gb|AEB61029.1| mitochondrial ribonuclease p protein 3-like protein, partial [Equus
caballus]
Length = 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + ++ +
Sbjct: 1 QWKGQFTTIQKSGQCLGCGKTIESIRLSPEEYEFLKGKILRDVIDGGDQYKKTTPQELKR 60
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ + F + S LD VV +L +++ L H
Sbjct: 61 FQNFVKHCPPFDIVIDGLNVA---KMFPKARESQVLLD-VVSQLAKQNLRLLVLGRKHML 116
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +E ++ + + S DD + YA + C +T D MRDH
Sbjct: 117 RQGSRWR----RDEMEMVQKQASCFFADNISEDDPFLQYATLHSGNHCKFITKDLMRDHK 172
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 173 ACLPDAKTQRLFFKWQQGHQ 192
>gi|326920739|ref|XP_003206626.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Meleagris
gallopavo]
Length = 574
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 263 ESGKCCSCGDQLACVDIDDAE----TERFAQSV--AALAMEREVKANFSEFQDWLEKNAN 316
ESG+C C QL ++ + E ER V + F FQ ++E
Sbjct: 180 ESGQCPVCNHQLEDSELTEEEYSNLRERIISDVIHGTDTFRKTSPQEFEAFQTFVENRLP 239
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRL--RSL-WE 373
++ ++DG NI + L V L + G L++L K + SL W+
Sbjct: 240 FDIVIDGLNIS----HIMPRKVQCENLFEAVNCLAKDYGR---LLVLGRKHMLTNSLNWK 292
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDH---IFELL 428
R +++E K + + S DD + LYA ++ C VT D +RDH + + +
Sbjct: 293 ----REVMKEMQNKADFFFAENISEDDAFLLYATLRSGKHCKFVTRDFLRDHKACLSDSV 348
Query: 429 GSNFFLKWKERHQ 441
+ F KW+ HQ
Sbjct: 349 TRHLFRKWQRGHQ 361
>gi|426248384|ref|XP_004017943.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 2 [Ovis
aries]
Length = 568
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + + ++ + FQ++++
Sbjct: 329 ESGQCLGCGKTVESIHLSSEEYEFLKEKIMRDVIDGGDQYKKTTPQELKRFQNFVKYCPP 388
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ + F + S L+ VV L +++ L +L R L +N
Sbjct: 389 FDVVIDGLNVA---KMFPKARESQVLLN-VVSHLAKQN-----LQVLVLGRKHMLTQNSR 439
Query: 377 HRNL-VEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGS 430
R + +E+ ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 440 WRRVEMEKMQKQASFFFADNISEDDPFLLYATLHSGNHCKFITKDLMRDHRACLPDAKTQ 499
Query: 431 NFFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 RLFFKWQQGHQ 510
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ + ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + +A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLNQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRM 343
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L ++ + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNE---------LFDEML 237
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 238 DXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLVTYNTLIYGLCKKGDL 296
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ S + G +E ++Y ++
Sbjct: 297 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRM 341
>gi|57090505|ref|XP_547772.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Canis lupus
familiaris]
Length = 581
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEF 307
W + +V ESG+C CG + + + E E + ++ + F
Sbjct: 333 WKGQFTTVKESGQCLGCGKTIESIHLSSEEYESLKGKIMKDVIDGGDLYKKTTPQELERF 392
Query: 308 QDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKR 367
Q++++ ++ ++DG N+ + F + S LD VV +L +++ L++L K
Sbjct: 393 QNFVKCCPPFDIVIDGLNVA---KTFPKARESQVLLD-VVSQLAKQN---LELLVLGRKH 445
Query: 368 L---RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRD 422
+ S W + + ++ + + S DD + LYA + C +T D MRD
Sbjct: 446 MLTQHSRWRKDEMKMV----QKQASCFFADNISEDDPFLLYATLHSGNHCKFITKDLMRD 501
Query: 423 H---IFELLGSNFFLKWKERHQ 441
H + + F KW+ HQ
Sbjct: 502 HKACLHNAKTQHLFFKWQRGHQ 523
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 137 DLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANE---------LFDEMLVKG 187
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
+ PN + T++ K D A + KRM ++ +++P L TY+ ++ C+ + ++A
Sbjct: 188 LAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 246
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
++ + MG+ GL ++ L+ + G ++ +++
Sbjct: 247 NDLIDEMGMKGLKPDKITYTTLIDGCCKEGNLDTAFEH 284
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 186 DLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLDKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCRKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ + M + GL ++ L+ + G +E +++ +++
Sbjct: 296 RDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRM 337
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 178 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 228
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
+IPN + T++ D A + KRM ++ +++P L TY+ ++ C+ + ++A
Sbjct: 229 LIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 287
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 288 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM 329
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|242079531|ref|XP_002444534.1| hypothetical protein SORBIDRAFT_07g023400 [Sorghum bicolor]
gi|241940884|gb|EES14029.1| hypothetical protein SORBIDRAFT_07g023400 [Sorghum bicolor]
Length = 121
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 163 MGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV 222
M G+ LE+ E+A LL+V+A+ G+ ++VY+ L + R+ +R V T +++E WF
Sbjct: 1 MDASGVVLEEPELAVLLRVNADKGKADEVYRLLHRTRALIRQVCGTTAQVVEAWFWSDAT 60
Query: 223 NGVSCD 228
+ V D
Sbjct: 61 SQVGVD 66
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +F++ML N
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANE---------LFNEMLDNG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K++ ++ P L TY+ +F C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQ-GFSPDLITYNTLIFGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ + M + L ++ L+ S + G +E ++Y +++
Sbjct: 296 RDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRM 337
>gi|345306253|ref|XP_001512026.2| PREDICTED: mitochondrial ribonuclease P protein 3-like
[Ornithorhynchus anatinus]
Length = 574
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 249 IGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKA 302
I +W + +V +SG+C +CG L + + E + + + +E +
Sbjct: 316 IPGERWKGQFTTVQKSGQCSACGKNLESLHLSPEEYDFLKEKIMKDVIEGSDQFRKTSPE 375
Query: 303 NFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
+++++++++ ++ ++DG N+ N L +V +L +++ L++
Sbjct: 376 ELEKYKNFVKRHPPFDIVIDGLNVA----NMKSKVRQSLTLLNMVTQLAQKNLR---LLV 428
Query: 363 LHNKRLRSLWENPSHR-NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDE 419
L K + L+ + R + +E + + T + S DD + LYA + C VT D
Sbjct: 429 LGRKHM--LYGTANWRKHEMEAVQKNAACFFTENTSEDDPFLLYATLHSGNHCKFVTQDL 486
Query: 420 MRDH---IFELLGSNFFLKWKERHQ 441
+RDH + + L F +W+ HQ
Sbjct: 487 LRDHKACLPDALTRRLFFRWQRGHQ 511
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +F +ML
Sbjct: 186 DLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANE---------LFXEMLDKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ M + GL ++ L+ S + G +E ++Y +++
Sbjct: 296 RNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRM 337
>gi|296214809|ref|XP_002753863.1| PREDICTED: mitochondrial ribonuclease P protein 3-like isoform 1
[Callithrix jacchus]
Length = 582
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + + E + ++ + +
Sbjct: 333 QWKGQFTTIQKSGQCSGCGQNIESIQLSPEDYEFLKGRIMRDVIDGGDQYKKTTPQELNR 392
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L H
Sbjct: 393 FENFVKSCPPFDIVIDGLNVA---KMFPKARESQLLLN-VVSQLAKQNLRLLVLGRKHML 448
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W ++ +EE ++ + + S DD + LYA + C +T D MRDH
Sbjct: 449 RKSSQWR----KDEMEEVQKQARCFFADNISKDDPFLLYATLHSGNHCKFITKDLMRDHK 504
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 505 ACLPDAKTQRLFFKWQQGHQ 524
>gi|302799808|ref|XP_002981662.1| hypothetical protein SELMODRAFT_115078 [Selaginella moellendorffii]
gi|300150494|gb|EFJ17144.1| hypothetical protein SELMODRAFT_115078 [Selaginella moellendorffii]
Length = 585
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C ++ +L A +Y S+ ++ FN+L+ C S A++ F VF
Sbjct: 141 IDGCARTGELAKAFGIYRIMLSKKIKPDRVIFNSLINACGRSG--------AVKRAFEVF 192
Query: 90 DQMLSNNVI-PNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTYDPALFCF 147
++ S ++I PN ++ S+ + DGD A+ + M P Y A+
Sbjct: 193 TELKSESLINPNHVTMCSLIDACSKAGDGDSAYEVYTMMRKRGIGGCPE--PYTAAVHAC 250
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ E+A+ + + M G+ ++ +AL+ V+ G++ + LQ++
Sbjct: 251 SSSGNLERAFSIYDDMKKDGVKADEIFFSALIDVAGHAGKINCAFDVLQEV 301
>gi|307197003|gb|EFN78378.1| Uncharacterized protein KIAA0391 [Harpegnathos saltator]
Length = 535
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 254 WVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN---------F 304
W + + GKC C QL+ + + F V A + V +N
Sbjct: 285 WSAAPTYISKGGKCSKCSMQLSDLSFNQ---NIFQDLVNAFMKKVIVGSNIYYKSHPKEL 341
Query: 305 SEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILH 364
+F +++ + Y+ ++DG N+ T+G L VVK +R L H
Sbjct: 342 EKFIEFIARTKPYDVVIDGLNVTY---AMTKGVAKPNTLVDVVKYFVKRKQKVLVLTRKH 398
Query: 365 NKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRD 422
K+L +++E + ++ T + S+DD Y LYA + + + V++D MR
Sbjct: 399 QKKL----------SVLEYIQKYAFVFWTNNLSSDDPYILYATLASGEKAIFVSSDLMRQ 448
Query: 423 HIFELLGSNF----FLKWKERHQ 441
H + LLG N F KW+ HQ
Sbjct: 449 HKY-LLGDNRLQWEFKKWQCSHQ 470
>gi|332018303|gb|EGI58908.1| Mitochondrial ribonuclease P protein 3 [Acromyrmex echinatior]
Length = 524
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 33/204 (16%)
Query: 254 WVVKRGSVDE-SGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREV-------KANFS 305
W R ++ + +G C CG L+ + + E Q +A M+R + K N
Sbjct: 275 WSTDRITISKKTGNCKHCGYFLSKMTFSEDE----FQELAKFVMDRVIIGSDIYNKTNPK 330
Query: 306 E---FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVI 362
E F+ ++E N ++ ++DG N+ + S P+L ++ + +++
Sbjct: 331 ELLNFKTFIENNKPFDVVIDGLNLTYMKYK------SAPKLLLLINVVEHFKSRGKKVLV 384
Query: 363 LHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYA--AVKLRCLLVTNDEM 420
L K R L E + +++ + S DD Y LYA A + + V++D M
Sbjct: 385 LTRKHQRKLSE-------FKRVERNAFVFLIDNLSADDPYILYATMACGMNTMFVSSDLM 437
Query: 421 RDHIFELLGSNF---FLKWKERHQ 441
R H + L ++ F KW+ HQ
Sbjct: 438 RQHKYSLQDADLQQKFKKWQFSHQ 461
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
P ET I L K ++ A+ +++ + LR + +N+LL +K
Sbjct: 295 PTIETYTSI-LDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL--------SGLAKA 345
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+ + + ++ML+N V+PNE S T++ A D + AF + +RM E N+ +
Sbjct: 346 RQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKE-NLAIDIVA 404
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y L C++ ++A EV + + GL + +L A G + K L ++
Sbjct: 405 YGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQ 464
>gi|297694929|ref|XP_002824716.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 3 [Pongo
abelii]
Length = 567
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 328 ESGRCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPWELKRFKNFIKSCPP 387
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ E F L VV +L +++ L H R S W
Sbjct: 388 FDVVIDGLNVAKMFPKVRESQF----LLNVVSQLAKQNLRLLVLGRKHMLRKCSQWS--- 440
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
++ ++E ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 441 -QDEMKEVQKQASCFFADNISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQR 499
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 500 LFFKWQQGHQ 509
>gi|322802765|gb|EFZ22977.1| hypothetical protein SINV_06078 [Solenopsis invicta]
Length = 489
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 32/194 (16%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREV-------KANFSE---FQDWLE 312
E+G C CG L+ + + E + A+S+ M+R + K N E FQ ++E
Sbjct: 254 ETGNCKHCGYSLSKITFTEKEFQELAKSI----MDRVIIGSDVYRKTNPQELLKFQRFIE 309
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
Y+ ++DG N+ Y QN T G ++ L VV ++ L H K+L S
Sbjct: 310 NTKPYDIVMDGLNLT-YMQNKT--GPTLYWLINVVDYFNKQKKKILVLTRKHQKKLFSF- 365
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLGS 430
++ + +++ S DD Y LYA + + + ++ D MR H L
Sbjct: 366 ---------KQIERRAHVFLLDDLSADDPYILYATMASGMNAMFISLDLMRQHKHSLQNE 416
Query: 431 NF---FLKWKERHQ 441
+ F KW+ HQ
Sbjct: 417 HLRQTFKKWQYSHQ 430
>gi|298707701|emb|CBJ26018.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 131
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 307 FQDWLEKNAN--YEAIVDGANIGLYQQNFTEGGFS-VPQLDAVVKKLYERSGNKWPLVIL 363
F+ WLE+ Y I+DGAN+G Y+ +EG + + Q+D VKK E K PLV+L
Sbjct: 46 FRGWLERRGKQRYNVIIDGANVGYYKACLSEGELADLRQVDWAVKKFQEEG--KKPLVVL 103
Query: 364 HNKRL 368
H++ L
Sbjct: 104 HSRHL 108
>gi|26327069|dbj|BAC27278.1| unnamed protein product [Mus musculus]
Length = 584
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 331 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 390
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++ ++ ++DG N+ + F +G S L VV ++ +++ L H
Sbjct: 391 FESFVNSCPPFDIVIDGLNVA---KMFPKGRESQ-NLLGVVSQVAQQNLQLLVLGRKHML 446
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W + +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 447 RPSSQWR----KEEMEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCKFITKDLLRDHK 502
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 503 ACLPDARTQRLFFKWQQGHQ 522
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLDKG 240
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 299
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ + M + GL ++ L+ + G +E +++ +++
Sbjct: 300 QDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRM 341
>gi|226493605|ref|NP_001151863.1| rf1 protein [Zea mays]
gi|195650381|gb|ACG44658.1| rf1 protein [Zea mays]
Length = 467
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 64 LLYLCSDSATDP-----------SSKDSALRHGFRVFDQMLSNNVIPNEASV-TSVARLA 111
LL +C D+ T P ++ +L H +FD+ML + P + T VA L
Sbjct: 143 LLAVCRDAGTPPDACTYNILMRAAAASGSLGHARHLFDEMLRRGIAPTVVTFGTLVAALC 202
Query: 112 ASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM-GLMGLSL 170
A+ D AF + + M +++V+P + Y + CE + + A ++E M G L L
Sbjct: 203 AAGQLED-AFEVKEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAMALKEEMAGKADLVL 261
Query: 171 EQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ A L++ + GR V L++++ +
Sbjct: 262 DSAVYATLVRALFQVGRKGAVVGLLEEMKGS 292
>gi|157822293|ref|NP_001100200.1| mitochondrial ribonuclease P protein 3 precursor [Rattus
norvegicus]
gi|221272061|sp|B5DF07.1|MRRP3_RAT RecName: Full=Mitochondrial ribonuclease P protein 3;
Short=Mitochondrial RNase P protein 3; Flags: Precursor
gi|149051251|gb|EDM03424.1| similar to 1110008L16Rik protein (predicted) [Rattus norvegicus]
gi|197246823|gb|AAI68878.1| Similar to 1110008L16Rik protein [Rattus norvegicus]
Length = 587
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C SCG + + + E E +++ ++ +
Sbjct: 334 QWKGQFTTIQKSGQCSSCGRAIESIHLSPEEYEFLKETIMRDVIDGGDQYKKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ +++ ++ ++DG N+ + F +G S L +V +L +++ L H
Sbjct: 394 FERFVKSCPPFDIVIDGLNVA---KMFPKGRES-QNLLGIVSQLAQQNLQLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDH- 423
R S W ++ +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 450 RPSSQWR----KDEMEQVRKQAHCFFADNISEDDPFLLYATLNSGSHCKFITKDLLRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 506 ACLPDARAQRLFFKWQQGHQ 525
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML N ++PN + T++ D A + ++M ++ +++P L
Sbjct: 218 KESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ-SLLPDL 276
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++ ++ + M + GL ++ L+ + + G +E ++Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKR 336
Query: 198 L 198
+
Sbjct: 337 M 337
>gi|194699862|gb|ACF84015.1| unknown [Zea mays]
gi|414886155|tpg|DAA62169.1| TPA: rf1 protein [Zea mays]
Length = 456
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 64 LLYLCSDSATDP-----------SSKDSALRHGFRVFDQMLSNNVIPNEASV-TSVARL- 110
LL +C D+ T P ++ +L H +FD+ML + P + T VA L
Sbjct: 132 LLAVCRDAGTPPDACTYNILMRAAAASGSLAHARHMFDEMLRRGIAPTVVTFGTLVAALC 191
Query: 111 AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM-GLMGLS 169
AA + +G AF + + M +++V+P + Y + CE + + A ++E M G L
Sbjct: 192 AAGQLEG--AFEVKEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAVALKEEMAGKADLV 249
Query: 170 LEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
L+ A L++ + GR V L++++ +
Sbjct: 250 LDSAVYATLVRALFQVGRKGAVVGLLEEMKGS 281
>gi|242012505|ref|XP_002426973.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511202|gb|EEB14235.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 484
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 30/201 (14%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQS-VAALAMEREVKAN-----FSE 306
KW VK SV +G C C + DI E E+ + ++ + + R + N +
Sbjct: 285 KWSVKITSVSNTGFCSQCKSNIGKADITMDELEKLKKYFISKVFIGRNININSTDKELNR 344
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F +L+K Y+ ++D NI Q V L +K NK
Sbjct: 345 FLHFLKKTDPYDVVIDHLNIKYLQ----SKNLKVSNLIQYFEK--------------QNK 386
Query: 367 RLRSLWENPSHRNLVEEWNEKGV-LYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDH 423
++ + + + E N Y T + S+DD + +YAA++ L + D ++ H
Sbjct: 387 KILFITRKHTSNEIKEICNSNHCQYYYTDNLSSDDLFTIYAAMQKDLNTYFFSKDFLKSH 446
Query: 424 ---IFELLGSNFFLKWKERHQ 441
I + N F+KW+ HQ
Sbjct: 447 SSLIDDSKLKNVFIKWQWSHQ 467
>gi|340718776|ref|XP_003397839.1| PREDICTED: hypothetical protein LOC100652080 [Bombus terrestris]
Length = 506
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 266 KCCSCGDQLACVDIDDAETERFAQSVAALAMEREV-----KANFSEFQDWLEKNANYEAI 320
+C C + ++ I D + ER ++ + E+ F ++++KN Y+ I
Sbjct: 277 RCHKCKEDISQESISDKDYERLLEATKKKLIFNEMCYVTNAQEIQSFINFIDKNKPYDLI 336
Query: 321 VDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNL 380
+DG NI + + + +L + K E+ NK L+I + +W + +
Sbjct: 337 IDGLNIMFLAKRSMKYDLTY-ELKQIFKSYKEQ--NKKILIIAR----KHMW-----KFI 384
Query: 381 VEEWNEKGVLYMTPHGSNDDWYWLYAAV--KLRCLLVTNDEMRDHIFELLG---SNFFLK 435
V+ + + + S DD + LYAA K +++ D MR HIF L + F K
Sbjct: 385 VKSGLQSVNCFYVQNSSKDDLFLLYAAFASKRNARIISKDLMRQHIFALQDLELNALFKK 444
Query: 436 WKERHQ 441
W+ HQ
Sbjct: 445 WQFSHQ 450
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSK 78
PN +T + I ++ D + A L+E + + + +N+LL LC D
Sbjct: 217 PNAKT-YSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD---- 271
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
+++F +M SN + P+ S + R ND AF ++ RM +N+VP +
Sbjct: 272 -----EAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMR-RYNLVPNVF 325
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY+ + C++ + ++AY++ + M G+S + A+ + V K + + ++
Sbjct: 326 TYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRM 385
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSK 78
PN +T + I ++ D + A L+E + + + +N+LL LC D
Sbjct: 190 PNAKT-YSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD---- 244
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
+++F +M SN + P+ S + R ND AF ++ RM +N+VP +
Sbjct: 245 -----EAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRR-YNLVPNVF 298
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY+ + C++ + ++AY++ + M G+S + A+ + V K + + ++
Sbjct: 299 TYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRM 358
>gi|296214811|ref|XP_002753864.1| PREDICTED: mitochondrial ribonuclease P protein 3-like isoform 2
[Callithrix jacchus]
Length = 566
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + + E + ++ + + F+++++
Sbjct: 327 ESGQCSGCGQNIESIQLSPEDYEFLKGRIMRDVIDGGDQYKKTTPQELNRFENFVKSCPP 386
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ + F + S L+ VV +L +++ L H R S W
Sbjct: 387 FDIVIDGLNVA---KMFPKARESQLLLN-VVSQLAKQNLRLLVLGRKHMLRKSSQWR--- 439
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
++ +EE ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 440 -KDEMEEVQKQARCFFADNISKDDPFLLYATLHSGNHCKFITKDLMRDHKACLPDAKTQR 498
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 499 LFFKWQQGHQ 508
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 188 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 238
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + KRM ++ +++P L TY+ ++ C+ + ++A
Sbjct: 239 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 297
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 298 HHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRM 339
>gi|255575578|ref|XP_002528689.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531861|gb|EEF33678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 271
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRM-NNEFNVVPRLRTYDPALFCFCENLEAEK 155
++P+ + + V R +ND D A ++ RM N N P + T+ + FC+ + +K
Sbjct: 118 LVPDSWTFSIVIRCHCKRNDADEAKRVLDRMLENGLN--PNVVTFTTLINSFCKKGKLQK 175
Query: 156 AYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
AYEV + M +G Q LLK G+VE+ Y+ L+ ++ +
Sbjct: 176 AYEVIDVMNTIGCQPNVQTYNCLLKGLCYIGKVEEAYEILEDIKKS 221
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
RV D+ML N + PN + T++ K A+ +I MN P ++TY+ L
Sbjct: 143 RVLDRMLENGLNPNVVTFTTLINSFCKKGKLQKAYEVIDVMNT-IGCQPNVQTYNCLLKG 201
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
C + E+AYE+ E + + + A++ + GR E+ Q L
Sbjct: 202 LCYIGKVEEAYEILEDIKKSSIEPDIYTYTAMMDGFCKVGRSEEAMQLL 250
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ +C ++ ++ A+ +Y++ N++ S + A+++ CS + + V+
Sbjct: 444 ISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGN--------VDYALLVY 495
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
D + + V P+E +++ A D + AF +I M E + P Y +L C
Sbjct: 496 DDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKE-GLKPGAVVYS-SLMGVCS 553
Query: 150 NLEA-EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208
NL EKA EV + + GL AL+ E + + LQ ++++ N+
Sbjct: 554 NLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQI 613
Query: 209 TGKIIEDWFSGQKVNGVSCDL 229
+ I+ +K+ ++ DL
Sbjct: 614 SYSILLRACEKEKMADMALDL 634
>gi|168024390|ref|XP_001764719.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684013|gb|EDQ70418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1020
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 11/185 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ +C K ++ A+ +Y+S +++ L + A ++ CS L + ++
Sbjct: 455 ISACAKGGEVGRALEVYQSMRENDVKGFLACYTAAVHACSQKGD--------LDYALAIY 506
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
D +L + V P+E +++ A D D AF ++ M + P Y +L C
Sbjct: 507 DDLLKDGVKPDEVFFSALVDAAGHSGDVDKAFSILDIMRKS-GMKPGAVVYS-SLMGVCS 564
Query: 150 NL-EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208
NL E EK EV E + L AL+ E + ++ L L+ R N+
Sbjct: 565 NLGEWEKGLEVYEGIRSSKLRPTVSTYNALMTALCEAKQFDRALSVLNDLKDAGRTPNQV 624
Query: 209 TGKII 213
+ I+
Sbjct: 625 SYSIL 629
>gi|355693219|gb|EHH27822.1| hypothetical protein EGK_18112 [Macaca mulatta]
Length = 581
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 332 QWKGQFTTVQKSGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKR 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L H
Sbjct: 392 FENFVKSCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLRLLVLGRKHML 447
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R W ++ + E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 448 RQSFQWR----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHK 503
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 504 ACLPDTKTQRLFFKWQQGHQ 523
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN + T++ K D A + KRM ++ +++P L
Sbjct: 224 KESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A ++ + M + GL ++ L+ + G ++ +++ ++
Sbjct: 283 ITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKR 342
Query: 198 L 198
+
Sbjct: 343 M 343
>gi|380818312|gb|AFE81030.1| mitochondrial ribonuclease P protein 3 precursor [Macaca mulatta]
Length = 581
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 332 QWKGQFTTVQKSGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKR 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L H
Sbjct: 392 FENFVKSCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLRLLVLGRKHML 447
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R W ++ + E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 448 RQSFQWR----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHK 503
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 504 ACLPDTKTQRLFFKWQQGHQ 523
>gi|355736111|gb|AES11892.1| hypothetical protein [Mustela putorius furo]
Length = 395
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ ESG+C CG + + + E E + ++ +
Sbjct: 147 QWKGQFITIKESGQCSGCGKTMESIHLSPEEYEFLKGEIMRDVIDGGDQYKKTTPQELKR 206
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ +++ ++ ++DG N+ + F + S LD V + + L++L K
Sbjct: 207 FQSFVKCCPPFDIVIDGLNVA---KTFPKVRESQVLLDVVS----QLAKQNLQLLVLGRK 259
Query: 367 RL---RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
+ S W ++ +++ ++ + + S DD + LYA + C +T D MR
Sbjct: 260 HMLTQHSRWR----KDEMKKVQQQASCFFADNISEDDPFLLYATLHSGNHCKFITKDLMR 315
Query: 422 DHIFELLGSN---FFLKWKERHQ 441
DH L + F KW++ HQ
Sbjct: 316 DHKACLRNAKTQRLFFKWQQGHQ 338
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ + ++ML N
Sbjct: 186 DLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANE---------MLNEMLDNG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +P L TY+ ++ C + +A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ-GFLPDLITYNTLIYGLCRRGDLGQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL-RSTVR 203
++ E M + GL ++ L+ S + G +E ++ +++ R +R
Sbjct: 296 RDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIR 343
>gi|124506873|ref|XP_001352034.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23505063|emb|CAD51845.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1144
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 297 EREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGN 356
ER +N +E +K NY ++DGANIG +QN G FS Q++ ++K++ ++ N
Sbjct: 565 ERNHTSNINEMNKLFDK-GNYTCLLDGANIGYNKQNVENGRFSFLQIE-ILKEIIKKKNN 622
Query: 357 KWPLVIL 363
+ PL+IL
Sbjct: 623 EKPLIIL 629
>gi|410925116|ref|XP_003976027.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Takifugu
rubripes]
Length = 507
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 18/190 (9%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
E G C C +L + + AE ++ V ++ + F+ ++++
Sbjct: 261 ERGTCGCCKSELESIQLTAAEYQQLKDRVMTDILQGRDVFTKTTPKELESFRSFVKRKPA 320
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ +VDG N+ Q+ + + L AVV +L + L H + W
Sbjct: 321 FDVVVDGLNVANINQDKSRQSKT---LLAVVSELQHQGLTVLVLGRRHMLQPSRSWVR-H 376
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
NLV+ +K + T + S DD + LYA + C V+ D MRDH + +
Sbjct: 377 DMNLVQ---QKAHCFFTENISEDDPFLLYATLFSGNHCRFVSRDLMRDHKACLTDAATRR 433
Query: 432 FFLKWKERHQ 441
F KW+ HQ
Sbjct: 434 LFFKWQRGHQ 443
>gi|109083314|ref|XP_001085149.1| PREDICTED: mitochondrial ribonuclease P protein 3-like isoform 4
[Macaca mulatta]
Length = 581
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 332 QWKGQFTTVQKSGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKR 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L H
Sbjct: 392 FENFVKSCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLRLLVLGRKHML 447
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R W ++ + E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 448 RQSFQWR----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHK 503
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 504 ACLPDAKTQRLFFKWQQGHQ 523
>gi|355778520|gb|EHH63556.1| hypothetical protein EGM_16548 [Macaca fascicularis]
Length = 581
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 332 QWKGQFTTVQKSGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKR 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L H
Sbjct: 392 FENFVKSCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLRLLVLGRKHML 447
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R W ++ + E ++ + + S DD + LYA + C +T D MRDH
Sbjct: 448 RQSFQWR----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHK 503
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 504 ACLPDAKTQRLFFKWQQGHQ 523
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
PN T + I + + K K+++ A+ +YE + +++L+Y+ S + ++D
Sbjct: 325 PNVVT-YTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARD 383
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
VF+ M IP+ + ++ A + + A L+ +M E + P L T
Sbjct: 384 --------VFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKM-EESSCKPDLNT 434
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y P L C N + + HM +SLE + L+ ++G++E + +++
Sbjct: 435 YSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMV 494
Query: 200 S 200
S
Sbjct: 495 S 495
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +F++ML
Sbjct: 186 DLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE---------LFEEMLVKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ +A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQ-SLLPDLITYNTLIYGLCKKGALNQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 296 HDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRM 337
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + K+M ++ ++ L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSADLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN---------VLFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
+N L+ C S + L + VFD+ML +V PN + ++ + D A
Sbjct: 151 YNVLINACCSSGS--------LGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEA 202
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180
F L + M FNV P Y + C E A+E+++ M L L+ + L+
Sbjct: 203 FRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIA 262
Query: 181 VSAETGRVEKVYQYLQKLR 199
+ GR ++V+ L+++R
Sbjct: 263 ALFKVGRKDEVFVVLEEMR 281
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ S + G +E +Y +++
Sbjct: 293 KQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRM 337
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L + FR++ +M + PN + T++ N A L M E+NV+P
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV-EWNVIPNE 530
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ + C+ +A+E+ + M GL + L+ TGRV + +++
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 198 LRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVL 237
L+ + +NE G + +NG+ C +GL+ A L
Sbjct: 591 LQGEQQKLNEIEGCLPNVVTYTALINGL-CKIGLMDKAEL 629
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G + ++M+ +P+EA+V+++ K + AF L+ ++ +F V P L Y+ +
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK-KFGVAPSLFVYNALI 362
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C++ + ++A + +MG GL + L+ + G+++ +L K+
Sbjct: 363 NSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN---------VLFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 16 RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATD 74
R P+ T ++ +Q+C D + + LY + L + H ++ ++ LC
Sbjct: 278 RNVAPDKIT-YMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLC------ 330
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
KD G+ VF+ M+S N A T++ A + A +L KRM E +
Sbjct: 331 ---KDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKE-GLE 386
Query: 135 PRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
P TY + C++ ++A E E G+++ ++L+ ++GRV++
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDE 442
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
++ F F +ML + PNE + + R S D D + L +M E + P L Y+
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK-ENGLSPDLYAYN 569
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187
+ FC+ + +KA E+ + M +GL + + L+K +E+GR
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN---------VLFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 30/240 (12%)
Query: 15 KRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATD 74
+++ P+P T F L C SK A+ + E ++L++ ++A++++C +
Sbjct: 404 RKEIPPDPMT-FSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGR- 461
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
L FR+ D+ + + PN T++ D D AF +++ M E +V
Sbjct: 462 -------LDDAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELM-KEDHVT 513
Query: 135 PRLRTYDPALFCFCENL-EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
P L T++ L CE + + A++V + G Q L+K + +K ++
Sbjct: 514 PNLVTFN-VLLGTCEVVGNSTCAFQVVGLLQEYGFRANLQTFNTLIKTCVRSHEWQKAFE 572
Query: 194 Y-----LQKLRSTVRCVN------EETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGG 242
LQ++R ++ N EE G DW ++ V D+ + +L G
Sbjct: 573 VYSQMQLQRIRPSLSTFNALSMAAEEGG----DW---RRAIDVMVDMRIKTEKILIRMAG 625
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ + K++ + AI +YE + + ++ +N+L++ C + + F F
Sbjct: 313 ISTFAKTRKYSLAIEMYEKMMERQVMPNVITYNSLIFAC--------LRANNFSQAFAFF 364
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
D M + + PN + +++ SK++ AF L M + + P T+ AL C+
Sbjct: 365 DDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEMIRK-EIPPDPMTFS-ALLSVCQ 422
Query: 150 NLEA-EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
+ + E+A +V E M G+ L + +A++ V + GR++ ++ L
Sbjct: 423 HSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGRLDDAFRIL 469
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN---------VLFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S D K + F +FD+M + V+P+ + + V N+ D AF +++RM
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERM-K 572
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
E VP + TY + C+ +KA++V + M G + L+ + +VE
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVE 632
Query: 190 KVYQYLQKLR 199
+ + L+ +R
Sbjct: 633 QAAEMLEIMR 642
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+V+++ML+++ + N+ + + AR D AF +IK M + VP TY +
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRK-GFVPDTSTYSKVITF 464
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
CE ++ EKA+ + + M +G+ + L+ + G +E+ + ++ S
Sbjct: 465 LCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESV 519
>gi|344274188|ref|XP_003408900.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Loxodonta
africana]
Length = 585
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E +++ ++ +
Sbjct: 335 QWKGQFTTIRKSGRCSGCGKTMESIYLSPEEYEFLKENIMRNVIDGGDQYKKTTPEELKR 394
Query: 307 FQDWLEKN-ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHN 365
FQ+++ + ++ ++DG N+ + F + S L+ VV +L +++ L++L
Sbjct: 395 FQNFVNNDCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLR---LLVLGR 447
Query: 366 KRLRSLWENPSHR-NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRD 422
K + L ++P R + +E+ ++ + S DD Y LYA + C +T D MRD
Sbjct: 448 KHM--LNQHPRWRKDEMEKVQKQASCFFADDISEDDPYLLYATLHSGNHCKFITKDLMRD 505
Query: 423 H---IFELLGSNFFLKWKERHQ 441
H + + F KW++ HQ
Sbjct: 506 HKACLPDAKTQRLFFKWQQGHQ 527
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM 343
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANX---------LFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 18 TNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPS 76
+P+ +T + I ++S + DL T + E +NL ++ +N ++ LC
Sbjct: 286 VDPDADT-YSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLC-------- 336
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
KD + +++ D+M+ V P+ S ++ ++ + A L+KRM+ + VP
Sbjct: 337 -KDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRD-KCVPD 394
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168
TY+ L ++A EV E MG G
Sbjct: 395 KHTYNMVLKLLVRVGRFDRANEVWESMGKRGF 426
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
D A +++ + + + +N+LL LC D +++F +M SN
Sbjct: 235 DSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRD---------EAYKMFLEMDSNG 285
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
V P+ + + R + +ND + +++R + N++P + TY+ + C++ E+A
Sbjct: 286 VDPDADTYSIFIRSSCQENDLHTVYRVLERTKRK-NLLPNVFTYNCVIKKLCKDQNVEEA 344
Query: 157 YEVEEHMGLMGLS 169
Y++ + M G++
Sbjct: 345 YQILDEMIERGVT 357
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 190 DLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 240
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
+ PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 241 LXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 299
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 300 HDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRM 341
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 18 TNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPS 76
+P+ +T + I ++S + DL T + E +NL ++ +N ++ LC
Sbjct: 286 VDPDADT-YSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLC-------- 336
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
KD + +++ D+M+ V P+ S ++ ++ + A L+KRM+ + VP
Sbjct: 337 -KDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRD-KCVPD 394
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168
TY+ L ++A EV E MG G
Sbjct: 395 KHTYNMVLKLLVRVGRFDRANEVWESMGKRGF 426
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
D A +++ + + + +N+LL LC D +++F +M SN
Sbjct: 235 DSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRD---------EAYKMFLEMDSNG 285
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
V P+ + + R + +ND + +++R + N++P + TY+ + C++ E+A
Sbjct: 286 VDPDADTYSIFIRSSCQENDLHTVYRVLERTKRK-NLLPNVFTYNCVIKKLCKDQNVEEA 344
Query: 157 YEVEEHMGLMGLS 169
Y++ + M G++
Sbjct: 345 YQILDEMIERGVT 357
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
RVFD+M+ V PN A+ ++ ++ K+ A + + M E P + T++ +
Sbjct: 296 RVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRG 355
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C + E+A E MG GL Q +++ + G +EK + K+
Sbjct: 356 LCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKM 407
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
PN T F I + + K+K + A+ +YE + +++L+++ + K+
Sbjct: 402 PNVIT-FTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKE 460
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+ + M V P+ + ++ A + + + A L+ +M E + P L+T
Sbjct: 461 --------IVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME-EVSCKPDLKT 511
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y P L FC + + +HM +S+E A L++ E G++ + ++
Sbjct: 512 YHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEML 571
Query: 200 STVRCVNEETGKIIED 215
S + T K++++
Sbjct: 572 SKAMVPKDSTFKMLKE 587
>gi|297297693|ref|XP_001085026.2| PREDICTED: mitochondrial ribonuclease P protein 3-like isoform 3
[Macaca mulatta]
Length = 565
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 326 ESGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKRFENFVKSCPP 385
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ + F + S L+ VV +L +++ L H R W
Sbjct: 386 FDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLRLLVLGRKHMLRQSFQWR--- 438
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
++ + E ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 439 -KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHKACLPDAKTQR 497
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 498 LFFKWQQGHQ 507
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 173 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANG---------LFDEMLVKG 223
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 282
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 283 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM 324
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
PN T F I + + K+K + A+ +YE + +++L+++ + K+
Sbjct: 379 PNVIT-FTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKE 437
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+ + M V P+ + ++ A + + + A L+ +M E + P L+T
Sbjct: 438 --------IVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME-EVSCKPDLKT 488
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y P L FC + + +HM +S+E A L++ E G++ + ++
Sbjct: 489 YHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEML 548
Query: 200 STVRCVNEETGKIIED 215
S + T K++++
Sbjct: 549 SKAMVPKDSTFKMLKE 564
>gi|321477361|gb|EFX88320.1| hypothetical protein DAPPUDRAFT_42022 [Daphnia pulex]
Length = 329
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 27/193 (13%)
Query: 260 SVDE-SGKCCSCGDQLACVDIDDAETERFAQSV---AALAMEREVKANFSE---FQDWLE 312
+VDE +G+C SC L +I D E Q + L + + + E FQ++++
Sbjct: 91 TVDEGTGRCRSCEKLLQNSEISDDEFADLKQGLMEKVLLGTDVYLGSKPEEIRRFQNFIQ 150
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLW 372
K A Y+ ++DG N+ Q + L +VVK Y + N LV+ LR
Sbjct: 151 KTAPYDVVIDGLNVA--HQGKQTFKYPDQALSSVVK--YFTNQNLRVLVLTRKHLLRGTT 206
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLR-CLLVTNDEMRDHIFELLG-- 429
+ +++ T S DD + L +AV+ V+ D RDH+F L
Sbjct: 207 L------------KSALVFATEDLSGDDPFLLCSAVQSSNTKFVSEDVFRDHLFRLGDFR 254
Query: 430 -SNFFLKWKERHQ 441
N F +W+ + Q
Sbjct: 255 LQNIFRRWQHKAQ 267
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
SK+S + +FD+ML ++PN + T++ D A + K+M ++ +++P
Sbjct: 223 SKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPD 281
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
L TY+ ++ C+ + ++A+++ + M GL ++ L+ + G ++ +++ +
Sbjct: 282 LITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRK 341
Query: 197 KL 198
++
Sbjct: 342 RM 343
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANG---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM 343
>gi|375493518|ref|NP_001243609.1| mitochondrial ribonuclease P protein 3 isoform 4 [Homo sapiens]
gi|375493520|ref|NP_001243610.1| mitochondrial ribonuclease P protein 3 isoform 4 [Homo sapiens]
gi|28071112|emb|CAD61937.1| unnamed protein product [Homo sapiens]
gi|119586286|gb|EAW65882.1| KIAA0391, isoform CRA_c [Homo sapiens]
Length = 211
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 304 FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
F+++++ ++ ++DG N+ E L VV +L +R+ L
Sbjct: 19 LKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRK 74
Query: 364 HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
H R S W R+ +EE ++ + S DD + LYA + C +T D MR
Sbjct: 75 HMLRRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMR 130
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 131 DHKACLPDAKTQRLFFKWQQGHQ 153
>gi|410962049|ref|XP_003987589.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial ribonuclease P
protein 3 [Felis catus]
Length = 582
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 25/203 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ SG+C CG + + + E E + + ++ +
Sbjct: 333 QWKGQFTTIQGSGQCSGCGKTIESLHLSPEEYEFLKEKIMRDVIDGGDQYXKTTPQELER 392
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
FQ++++ ++ ++DG N+ + F + S L VV +L +++ L++L K
Sbjct: 393 FQNFVKCCPPFDIVIDGLNVA---KTFPKARESQVLLH-VVSQLAKQNLQ---LLVLGRK 445
Query: 367 RL---RSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
+ S W ++ +++ ++ + + S DD + LYA + C +T D MR
Sbjct: 446 HMLTQHSRWR----KDEMKKVQKQASCFFADNISADDPFLLYATLHSGNHCKFITKDLMR 501
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 502 DHKACLHDAKTQRLFFKWQQGHQ 524
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALR 83
N LIN K DL L + H+ + ++ ++ L+ LC + D +++
Sbjct: 175 NTLIN--GYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANE----- 227
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
+F++ML N ++PN + T++ D A + K+M ++ + P L TY+
Sbjct: 228 ----LFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQ-GLSPDLITYNTL 282
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
++ C+ E ++ +++ + M + GL ++ L+ S + G +E
Sbjct: 283 IYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
+IPN + T++ D A + K M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 243 LIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRM 343
>gi|357516331|ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
gi|355522476|gb|AET02930.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
Length = 303
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+FD+M NV P++ + ++ + AF + K M EF + P + Y +
Sbjct: 167 LFDEMRRTNVCPDQVTFGTLIHGLCKDSRMHQAFGMKKLMIQEFKLKPCVSVYTNLMKGV 226
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207
CE E +A+E+++ M GL L+ L+ + GR E+ + L++++ + N
Sbjct: 227 CEIGELHRAFEIKDEMERNGLRLDVVVYNTLVNALFKAGRKEEALRVLEEMKESGYHWNS 286
Query: 208 ETGKIIEDWFSGQK 221
T ++ F QK
Sbjct: 287 VTCNVMIGEFCRQK 300
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + ++ ++ ++ L+ LC +S D ++ +FD+ML
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDAN---------VLFDEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A ++ + M + GL ++ L+ + + G +E ++Y +++
Sbjct: 293 KQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRM 337
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALR 83
N LIN K DL L + H+ + ++ ++ L+ LC + D +++
Sbjct: 175 NTLIN--GYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANE----- 227
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
+F++ML N ++PN + T++ D A + K+M ++ + P L TY+
Sbjct: 228 ----LFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQ-GLSPDLITYNTL 282
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
++ C+ E ++ +++ + M + GL ++ L+ S + G +E
Sbjct: 283 IYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLE 328
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S D +++ +F++ML
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANE---------LFNEMLDRG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ + D A + K+M ++ P L TY+ ++ C+ + ++
Sbjct: 237 LVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQ-GFSPDLITYNTLIYGLCKKGDLKQV 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + M + GL ++ L+ + G +E +++ +++
Sbjct: 296 RALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRM 337
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ +C KS D T A ++E ++ +R FNAL+Y +S+ L F++
Sbjct: 571 IDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIY--------GASRSHDLAASFKIV 622
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
D ML + P+ ++ ++ + D AF ++++ + V P T++ + +
Sbjct: 623 DLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKF-KQLGVHPDNVTFNTFIDAVGK 681
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+EK +E+ M G+S + + ++ G+++
Sbjct: 682 LDSSEKMFELLSEMESRGISPSKVTLNTIVGCCGRRGKID 721
>gi|328715603|ref|XP_001949258.2| PREDICTED: mitochondrial ribonuclease P protein 3-like isoform 1
[Acyrthosiphon pisum]
gi|328715605|ref|XP_003245671.1| PREDICTED: mitochondrial ribonuclease P protein 3-like isoform 2
[Acyrthosiphon pisum]
Length = 531
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 30/193 (15%)
Query: 264 SGKCCSCGDQLACVDIDDAE----TERFAQSV--AALAMEREVKANFSEFQDWLEKNANY 317
+GKC +C L ++ +++ ERF V S+F+D++E A Y
Sbjct: 295 NGKCKNCNQVLEHAEVTNSDFKILQERFLSDVMIGKNIFNNSSPQELSDFKDFIEITAPY 354
Query: 318 EAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSH 377
+ +VDG N+ Y G S+ + V+K E+ K ++++ K L +
Sbjct: 355 DVVVDGLNLA-YAYRGKIGDHSLTKF--VMKSFIEK---KLKVLLIGRKHLVKM------ 402
Query: 378 RNLVEEWN---EKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDHIFELLG--- 429
L +E++ + ++ T S DD + LYAA+ + ++T D MR H + LLG
Sbjct: 403 --LGKEFDFIKKNAHIFFTNDLSKDDPFVLYAAMYSGIDTKILTRDLMRGHKY-LLGDAI 459
Query: 430 -SNFFLKWKERHQ 441
+ F KW ++H+
Sbjct: 460 IKSIFQKWLQKHR 472
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 175 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANE---------LFDEMLVKG 225
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 226 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 284
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 285 HHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRM 326
>gi|47209081|emb|CAF91538.1| unnamed protein product [Tetraodon nigroviridis]
Length = 502
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 299 EVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKW 358
E +A F+ ++ ++ +VDG N+ ++ + + L AVV +L R +
Sbjct: 285 EHQAELERFRTFVGSQPAFDVVVDGLNVANLSKDRSRQSET---LLAVVSELQRRGLSVL 341
Query: 359 PLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVT 416
L H R W H +L++ K + T + S DD + LYAA+ C V+
Sbjct: 342 VLGRKHMLRPSRSWPG-RHMDLLQ---LKARCFFTENISEDDPFLLYAALHSGNHCRFVS 397
Query: 417 NDEMRDHIFELLGS---NFFLKWKERHQ 441
D MRDH L F KW+ HQ
Sbjct: 398 RDLMRDHKARLADGATRQLFFKWQRGHQ 425
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
NPNP ++ + +K + A+SL E ++ +NA++ + SK
Sbjct: 552 NPNP-VSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI--------NGLSK 602
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
++ ++ D+M ++PN + T++ +AF + M +P L
Sbjct: 603 ENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLPNLY 661
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY ++ C+ +A++A + + M GL+ ++ +L+ GR++ + L+++
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH---GFRVFDQMLSNNVIP 99
++ YE+ + LR ++ F+ L+ S+ A R R F +ML + P
Sbjct: 114 VAAYEAMLACQLRPTIVTFSTLI-----------SRAGACRRVRLAERFFREMLEAGITP 162
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
+ ++ S+ A D A + +M+ + V P + T++ + + ++A +V
Sbjct: 163 DVQAINSLINAFAKAGSPDQALKVFDQMS-RYGVTPSVITFNTLIDACGRAGDIDRARQV 221
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
+ GLS + +AL+ A G+V++ + +LQ++R+
Sbjct: 222 FSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRA 262
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRM 343
>gi|426376683|ref|XP_004055123.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 4
[Gorilla gorilla gorilla]
gi|426376685|ref|XP_004055124.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 5
[Gorilla gorilla gorilla]
Length = 211
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 304 FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
F+++++ ++ ++DG N+ E L VV +L +R+ L
Sbjct: 19 LKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRK 74
Query: 364 HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
H R S W R+ +EE ++ + S DD + LYA + C +T D MR
Sbjct: 75 HMLRRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMR 130
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 131 DHKACLPDAKTQRLFFKWQQGHQ 153
>gi|148704783|gb|EDL36730.1| mCG22352, isoform CRA_a [Mus musculus]
Length = 271
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 18 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 77
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++ ++ ++DG N+ + F +G S L VV +L +++ L H
Sbjct: 78 FESFVNSCPPFDIVIDGLNVA---KMFPKGRESQ-NLLGVVSQLAQQNLQLLVLGRKHML 133
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W + +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 134 RPSSQWR----KEEMEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCKFITKDLLRDHK 189
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 190 ACLPDARTQRLFFKWQQGHQ 209
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 186 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 296 HDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRM 337
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
P ET I L K ++ A+ +++ + LR + +N+LL +K
Sbjct: 393 PTIETYTSI-LDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL--------SGLAKA 443
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+ + + ++ML+N V+P+E T++ A D + AF + +RM E N+ +
Sbjct: 444 RQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKE-NLAIDIVA 502
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS-AETGRVEKVYQYLQKL 198
Y L C + A EV + + GL Q +L + A GRVE+ + + +
Sbjct: 503 YGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAM 562
>gi|402875947|ref|XP_003901752.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 1 [Papio
anubis]
Length = 581
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++
Sbjct: 332 QWKGQFTTVQKSGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKNTTPQELKR 391
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L++L K
Sbjct: 392 FENFIKSCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLR---LLVLGRK 444
Query: 367 RLRS---LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
+ + W ++ + E ++ + + S DD + LYA + C +T D MR
Sbjct: 445 HMLTQSFQWR----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMR 500
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 501 DHKACLPDAKTQRLFFKWQQGHQ 523
>gi|356574070|ref|XP_003555175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 720
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 56 LSLHHFNALLYLCSDSATDPSSKD-SALRHGF----------RVFDQMLSNNVIPNEASV 104
L+LH F + ++ DP+SK L G V +QML + P+
Sbjct: 214 LALHQFRRM----NNKGCDPNSKTFEILVKGLIESGQVDEAATVLEQMLKHKCQPDLGFY 269
Query: 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164
T + L +N + A L K M + + VP Y+ + CFC NL+ + A + M
Sbjct: 270 TCIIPLFCRENKVEEAVKLFKMMKDS-DFVPDSFIYEVLVRCFCNNLQLDSAVSLINEMI 328
Query: 165 LMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
+G+ + + ++ E G++ + +L+
Sbjct: 329 EIGMPPKHNVLVDMMNCFCELGKINEAIMFLE 360
>gi|395838223|ref|XP_003792018.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 1
[Otolemur garnettii]
Length = 485
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 208 ETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGW-HGL-GWI----GQGKWVVKRGSV 261
+ GK I+D + K+ + L ++N L G + H + W GQ +W + ++
Sbjct: 189 DLGKDIKDDYYSNKLQDI---LLYLRNNQLYPGESFAHSIKTWFESVPGQ-QWKGEFTTI 244
Query: 262 DESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNA 315
+SG+C SCG + +++ E E + ++ + F+ +++
Sbjct: 245 RKSGQCSSCGKTIESIELSPEEYEFLTGKIMRDVIDGGDQYKKTTPWELRTFEKFVKSCP 304
Query: 316 NYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENP 375
++ ++DG N+ + F + S L+ +V +L +++ L H + S W
Sbjct: 305 PFDIVIDGLNVA---KMFPKARESQVLLE-LVSQLAKQNLRLLVLGRKHMLKKSSRWR-- 358
Query: 376 SHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGS 430
++ +E ++ + S DD + LYA + C VT D MRDH + +
Sbjct: 359 --KDEMEMVQKQASCFFADDISKDDPFLLYATLHSGNHCKFVTKDLMRDHKACLPDAKTQ 416
Query: 431 NFFLKWKERHQ 441
F KW++ HQ
Sbjct: 417 RLFFKWQQGHQ 427
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 70 DSATDPSSKDSALRHG-----FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLI 124
D T D+ R G + D M+S + P + SV + D A+ +
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 249
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184
K M+ +F V P +R++ + FC E E+A ++ + M G+ + + L+ + A
Sbjct: 250 KEMD-DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308
Query: 185 TGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAV 236
G+++ YL+++ RC ++ D V G C GL+ +A+
Sbjct: 309 RGKMDHAMAYLREM----RCFG-----LVPDGVIYTMVIGGFCRAGLMSDAL 351
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC +S + +++ +F +M+ N
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANE---------LFGEMIGNG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A K M + P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQ-GFSPDLITYNTLIYGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ + M + GL ++ L+ S + G +E Y +++
Sbjct: 296 QDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRM 337
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 70 DSATDPSSKDSALRHG-----FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLI 124
D T D+ R G + D M+S + P + SV + D A+ +
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188
Query: 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184
K M+ +F V P +R++ + FC E E+A ++ + M G+ + + L+ + A
Sbjct: 189 KEMD-DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247
Query: 185 TGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAV 236
G+++ YL+++ RC ++ D V G C GL+ +A+
Sbjct: 248 RGKMDHAMAYLREM----RCFG-----LVPDGVIYTMVIGGFCRAGLMSDAL 290
>gi|227908787|ref|NP_079649.1| mitochondrial ribonuclease P protein 3 precursor [Mus musculus]
gi|81900785|sp|Q8JZY4.1|MRRP3_MOUSE RecName: Full=Mitochondrial ribonuclease P protein 3;
Short=Mitochondrial RNase P protein 3; Flags: Precursor
gi|22028176|gb|AAH34876.1| RIKEN cDNA 1110008L16 gene [Mus musculus]
gi|74207319|dbj|BAE30844.1| unnamed protein product [Mus musculus]
gi|74207414|dbj|BAE30887.1| unnamed protein product [Mus musculus]
gi|148704785|gb|EDL36732.1| mCG22352, isoform CRA_c [Mus musculus]
Length = 584
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 331 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 390
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++ ++ ++DG N+ + F +G S L VV +L +++ L H
Sbjct: 391 FESFVNSCPPFDIVIDGLNVA---KMFPKGRESQ-NLLGVVSQLAQQNLQLLVLGRKHML 446
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W + +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 447 RPSSQWR----KEEMEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCKFITKDLLRDHK 502
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 503 ACLPDARTQRLFFKWQQGHQ 522
>gi|50510469|dbj|BAD32220.1| mKIAA0391 protein [Mus musculus]
Length = 275
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 22 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 81
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++ ++ ++DG N+ + F +G S L VV +L +++ L H
Sbjct: 82 FESFVNSCPPFDIVIDGLNVA---KMFPKGRESQ-NLLGVVSQLAQQNLQLLVLGRKHML 137
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W + +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 138 RPSSQWR----KEEMEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCKFITKDLLRDHK 193
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 194 ACLPDARTQRLFFKWQQGHQ 213
>gi|224034665|gb|ACN36408.1| unknown [Zea mays]
Length = 168
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 87 RVF-DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALF 145
R F D M + +P+ + TS+ K D A L++ M + P RTY L
Sbjct: 30 RAFLDAMAAEGHLPDVVTYTSLMNGMCVKGDALGALKLLEEMQGK-GCQPNERTYSTLLM 88
Query: 146 CFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
C+N + +KA EV + M G LE A+ ++ +G V Y+
Sbjct: 89 GLCKNKKLDKAVEVYKSMAAAGTKLESPAYASFVRALCRSGSVADAYE 136
>gi|395838225|ref|XP_003792019.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 2
[Otolemur garnettii]
Length = 566
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 19/190 (10%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C SCG + +++ E E + ++ + F+ +++
Sbjct: 327 ESGQCSSCGKTIESIELSPEEYEFLTGKIMRDVIDGGDQYKKTTPWELRTFEKFVKSCPP 386
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ + F + S L+ +V +L +++ L H + S W
Sbjct: 387 FDIVIDGLNVA---KMFPKARESQVLLE-LVSQLAKQNLRLLVLGRKHMLKKSSRWR--- 439
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELLGSN 431
++ +E ++ + S DD + LYA + C VT D MRDH + +
Sbjct: 440 -KDEMEMVQKQASCFFADDISKDDPFLLYATLHSGNHCKFVTKDLMRDHKACLPDAKTQR 498
Query: 432 FFLKWKERHQ 441
F KW++ HQ
Sbjct: 499 LFFKWQQGHQ 508
>gi|298707573|emb|CBJ30157.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 225
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAV---KLRCLLVTNDEMRDHIFELLGSN 431
P +V++W E L M DD YW+YA V + L++TND MRDH G+
Sbjct: 21 PIETEIVQKWVENQWLAMV--EGLDDLYWMYATVARDDVNTLVLTNDLMRDHRNFFPGTR 78
Query: 432 FFLKWKERH 440
F++WK H
Sbjct: 79 EFVRWKRSH 87
>gi|194382740|dbj|BAG64540.1| unnamed protein product [Homo sapiens]
Length = 211
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 304 FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
F+++++ ++ ++DG N+ E L VV +L +RS L
Sbjct: 19 LKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRSLRLLVLGRK 74
Query: 364 HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
H R W R+ +EE ++ + S DD + LYA + C +T D MR
Sbjct: 75 HMLRRSFQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMR 130
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 131 DHKACLPDAKTQRLFFKWQQGHQ 153
>gi|12834350|dbj|BAB22879.1| unnamed protein product [Mus musculus]
Length = 317
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 64 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 123
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++ ++ ++DG N+ + F +G S L VV +L +++ L H
Sbjct: 124 FESFVNSCPPFDIVIDGLNVA---KMFPKGRESQ-NLLGVVSQLAQQNLQLLVLGRKHML 179
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W + +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 180 RPSSQWR----KEEMEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCKFITKDLLRDHK 235
Query: 424 --IFELLGSNFFLKWKERHQ 441
+ + F KW++ HQ
Sbjct: 236 ACLPDARTQRLFFKWQQGHQ 255
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
NPNP ++ + +K + A+SL + ++ +NA++ + SK
Sbjct: 510 NPNP-VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI--------NGLSK 560
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
++ ++ D+M+ ++PN + T++ +AF + M +P L
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLPNLY 619
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY ++ C+ +A++A + + M GL+ ++ +L+ GR++ + L+++
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 78/185 (42%), Gaps = 11/185 (5%)
Query: 18 TNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPS 76
T PN T N LIN K+ D+ +A+ +Y + + FN+L+ D
Sbjct: 184 TRPNTVTYNVLIN--GYGKALDMESAVRMYWQLILHSCPPDVVTFNSLI--------DGY 233
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
+ L R++ +M +++ PN + + + ++N A L++ +N ++VP+
Sbjct: 234 CRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQ 293
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
Y+P + C+ + ++A + M G ++ L+ GR+ +
Sbjct: 294 TFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFH 353
Query: 197 KLRST 201
K+ T
Sbjct: 354 KMVET 358
>gi|402875951|ref|XP_003901754.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 3 [Papio
anubis]
Length = 485
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 25/203 (12%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++
Sbjct: 236 QWKGQFTTVQKSGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKNTTPQELKR 295
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ + F + S L+ VV +L +++ L++L K
Sbjct: 296 FENFIKSCPPFDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLR---LLVLGRK 348
Query: 367 RLRS---LWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
+ + W ++ + E ++ + + S DD + LYA + C +T D MR
Sbjct: 349 HMLTQSFQWR----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMR 404
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 405 DHKACLPDAKTQRLFFKWQQGHQ 427
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSAL 82
T F + K + A LY + + + S++ F AL+Y LCS + +SK
Sbjct: 464 TTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASK---- 519
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
+FD+M+ + P E + + ++ D AF L++ M + +VP TY P
Sbjct: 520 -----LFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHN-GLVPDTYTYRP 573
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
+ C A + + + L L + +ALL GR+
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRL 619
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 20/218 (9%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K DL+ A LY ++ L + F L+ KD + F+++ +M
Sbjct: 440 KFGDLSAAEFLYTKMINEGLEPTATTFTTLI--------SGYCKDLQVEKAFKLYREMNE 491
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
+ P+ + T++ S N+ A L M E + P TY+ + +C+ +
Sbjct: 492 KEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV-ERKIKPTEVTYNVMIEGYCKAHNMD 550
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIE 214
KA+E+ E M GL + L+ TGRV ++ L +NE +
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALL 610
Query: 215 DWFSGQ----KVNGVSCD-------LGLVKNAVLKNGG 241
+ GQ + SC+ + LV +AVL +G
Sbjct: 611 HGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGA 648
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 174 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 224
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + +A
Sbjct: 225 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLNQA 283
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 284 HGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRM 325
>gi|357129559|ref|XP_003566429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Brachypodium distachyon]
Length = 461
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 61 FNALLYLCSDSATDP-----------SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVAR 109
+ L +C D+ P ++ ++ H +FD+M+ + P + ++
Sbjct: 133 LDELFSVCRDADVSPDACTYNILMRAAAASGSVDHARLLFDEMVQRRIAPTVVTFGTLVA 192
Query: 110 LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM-GLMGL 168
S D AF L + M ++NV P Y + C++ +A+ A ++E M G L
Sbjct: 193 AFCSSGRLDEAFDLKEAMARQYNVRPNAHVYASLMKGLCQSGDADNAVRLKEEMAGNAEL 252
Query: 169 SLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
L+ A L++ GR +V L++++
Sbjct: 253 GLDSAIYATLVRALFRVGRKGEVVGLLEEMK 283
>gi|399107214|gb|AFP20371.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM BE P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIBE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRM 343
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S P S+ + VFD+ML + P + + R+ S G+ F+L+++M
Sbjct: 364 NSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKS---GEEVFMLLEKMK- 419
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
E P TY + FC + + +++ M G+ ++ L+ G++E
Sbjct: 420 ETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLE 479
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGV 225
+ Y+Y +++ +T +++ W SG++ V
Sbjct: 480 EAYKYYIEMKEKQFLPEPKTEDMLQAWISGKETADV 515
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC ++ D ++K +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANK---------LFDEMLVKA 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 NDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRM 343
>gi|255572014|ref|XP_002526948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533700|gb|EEF35435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 671
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
L +C+K+ + T A+ ++ Q + ++ + ALL SA + K RV+
Sbjct: 434 LVACSKASETTAAVQIFRRMIEQGEKPTIVSYGALL-----SALE---KGKLYDEAVRVW 485
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
+ ML +V PN + T +A + A + Y +I++M + + P + TY+ +
Sbjct: 486 EHMLKVDVKPNLYAYTIMASVFAGQGKFTYVDAIIQKMVSS-GIEPTIITYNAIISGCTH 544
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEET 209
N + AYE M + + + L++ A+ G+ Y+ LR+ ++ +
Sbjct: 545 NNLSSAAYEWFHRMKVQNMPPNKITYEMLIEALAKDGKPRLAYELY--LRAKYEGLD-LS 601
Query: 210 GKIIEDWFSGQKVNGVSCDLGLV 232
K+ + +V G + D+ ++
Sbjct: 602 AKVYDAVLRSSQVYGATIDINVL 624
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN + T++ D A + K+M ++ +++P L
Sbjct: 220 KESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 278
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A+++ + M GL ++ L+ + G ++ + + ++
Sbjct: 279 ITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKR 338
Query: 198 L 198
+
Sbjct: 339 M 339
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 186 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 296 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRM 337
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 19/169 (11%)
Query: 16 RKTNPNPET--NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHH----FNALLYLCS 69
+ NPN +T + I L TK+ +A S+ + S+ H F A+LY
Sbjct: 182 KAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSG---SIDHPSKLFEAILYSYR 238
Query: 70 DSATDPSSKDS---------ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
+ P DS LR+ VF QM +P S + + S GD A
Sbjct: 239 ICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIA 298
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
+ M + + P + T + + FC+ + EKA EV + M MG S
Sbjct: 299 LTFYREMQ-RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFS 346
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRM 343
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ + ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 178 DLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANE---------LFDEMLDKG 228
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ L TY+ ++ C+ + ++A
Sbjct: 229 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSADLITYNTLIYGLCKKGDLKQA 287
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + M + GL ++ L+ + G +E +++ +++
Sbjct: 288 QNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRM 329
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +F++ML N ++PN + T++ A + K+M ++ ++ P L
Sbjct: 218 KESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQ-SLSPDL 276
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A ++ + M + GL ++ L+ S + G +E Y ++
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKR 336
Query: 198 L 198
+
Sbjct: 337 M 337
>gi|399107196|gb|AFP20362.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM BE P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIBE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 14/187 (7%)
Query: 16 RKTNPNPET--NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
R PN T FL L K D A++L+ + + +RL ++ + L+
Sbjct: 109 RGHEPNHVTYNTFLHGLCKYGKVDD---ALALFRAMTEKKIRLDVYGYTTLI-------- 157
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D + L + + D+M ++ +P ++ + + A L KRM +
Sbjct: 158 DGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGS-GI 216
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+P T+ +F +C + A + + M GL+ + L+ GRV + Y+
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276
Query: 194 YLQKLRS 200
LQ++ S
Sbjct: 277 LLQEMIS 283
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 14/187 (7%)
Query: 16 RKTNPNPET--NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
R PN T FL L K D A++L+ + + +RL ++ + L+
Sbjct: 109 RGHEPNHVTYNTFLHGLCKYGKVDD---ALALFRAMTEKKIRLDVYGYTTLI-------- 157
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D + L + + D+M ++ +P ++ + + A L KRM +
Sbjct: 158 DGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGS-GI 216
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+P T+ +F +C + A + + M GL+ + L+ GRV + Y+
Sbjct: 217 LPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYR 276
Query: 194 YLQKLRS 200
LQ++ S
Sbjct: 277 LLQEMIS 283
>gi|297834586|ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331015|gb|EFH61434.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 653
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
++ F F +ML + PNE + + R + S D + L M E + P L Y+
Sbjct: 505 IKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMK-ESGLSPNLYAYN 563
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187
+ FC+ + +KA E+ + M +GL + + L+K +E+GR
Sbjct: 564 AIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 609
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + FD+ML ++PN + T++ D A + K+M ++ +++P L
Sbjct: 224 KESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQ-SLLPDL 282
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A+++ + M + GL ++ L+ + G ++ +++ ++
Sbjct: 283 ITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKR 342
Query: 198 L 198
+
Sbjct: 343 M 343
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/165 (18%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
+ DL L + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 170 RXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEML 220
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ +
Sbjct: 221 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDL 279
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 280 KQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRM 324
>gi|238012854|gb|ACR37462.1| unknown [Zea mays]
gi|414586240|tpg|DAA36811.1| TPA: hypothetical protein ZEAMMB73_657460 [Zea mays]
Length = 77
Score = 43.9 bits (102), Expect = 0.14, Method: Composition-based stats.
Identities = 15/22 (68%), Positives = 21/22 (95%)
Query: 420 MRDHIFELLGSNFFLKWKERHQ 441
MRDH+F+LLG++FF +WKE+HQ
Sbjct: 1 MRDHLFQLLGTSFFPRWKEKHQ 22
>gi|310831084|ref|YP_003969727.1| hypothetical protein crov095 [Cafeteria roenbergensis virus BV-PW1]
gi|309386268|gb|ADO67128.1| hypothetical protein crov095 [Cafeteria roenbergensis virus BV-PW1]
Length = 325
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
Y+ + DG NI L ++ E S +L ++V+ ++ PLV +H + ++++
Sbjct: 171 YDLVFDGNNILLNKKGIFEVE-SFKKLHSLVES--TKTKGYTPLVFIHIRHVKTI----- 222
Query: 377 HRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHI 424
+ L + TP+ NDDW+ LY A+K LV+ D RDHI
Sbjct: 223 -KRL--GLDIPFAFISTPYRYNDDWFSLYYAIKHDIPLVSRDIFRDHI 267
>gi|328874279|gb|EGG22645.1| hypothetical protein DFA_04775 [Dictyostelium fasciculatum]
Length = 628
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 54/117 (46%)
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
++ ++ D+++ N+ P V ++ D D F ++K M N + +VP Y
Sbjct: 225 KNALKLLDRVIKENMSPTVHMFDGVINAYSNAGDTDKPFEILKVMENTYGLVPDHVNYTT 284
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ +N + + A EV G++ + ++ ++ A+ R+EK + Y ++ +
Sbjct: 285 MVHGLIKNKKIDTAIEVFSDAKTKGMNPDSVTLSVMIDACAKDDRIEKAFNYYEEFK 341
>gi|431907348|gb|ELK11321.1| Mitochondrial ribonuclease P protein 3 [Pteropus alecto]
Length = 568
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ + F+++++
Sbjct: 329 ESGQCLGCGKTIESIHLSPEEYEYLKGKIMRDVIDGGDQYKKTTPQELKRFKNFVKYCPP 388
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS 376
++ ++DG N+ + F + S L+ VV +L +++ +++L K + + P
Sbjct: 389 FDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLQ---VLVLGRKHMLT----PC 437
Query: 377 HR---NLVEEWNEKGVLYMTPHGSNDDWYWLYAAVK--LRCLLVTNDEMRDH---IFELL 428
R + +E+ ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 438 ARWRKDEMEKVQKQASCFFADNISEDDPFLLYATLHSGSHCKFITKDLMRDHKACLPDAK 497
Query: 429 GSNFFLKWKERHQ 441
F KW++ HQ
Sbjct: 498 TQRLFFKWQQGHQ 510
>gi|341605707|gb|AEK82956.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM BE P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIBE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|226493938|ref|NP_001152190.1| ATP binding protein [Zea mays]
gi|195653677|gb|ACG46306.1| ATP binding protein [Zea mays]
gi|413926813|gb|AFW66745.1| ATP binding protein [Zea mays]
Length = 376
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
D M + +P+ + TS+ K D A L++ M + P RTY L C
Sbjct: 241 LDAMAAEGHLPDVVTYTSLMNGMCVKGDALGALKLLEEMQGK-GCQPNERTYSTLLMGLC 299
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+N + +KA EV + M G LE A+ ++ +G V Y+
Sbjct: 300 KNKKLDKAVEVYKSMAAAGTKLESPAYASFVRALCRSGSVADAYE 344
>gi|147862347|emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
Length = 566
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
L +F++M + PN+ + + A D + AFVL RM E +VP L T
Sbjct: 206 GTLEEALVLFERMKVEGLEPNDFTWNXMIAGYARDGDCNGAFVLFSRMVRE-GLVPDLVT 264
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
++ + F ++L+A +A+ + + M + G+ Q + LL G + +
Sbjct: 265 WNAMISGFTQSLKAVEAWRLFQDMXVAGIKPNQVTVTGLLPACGLMGSIHR 315
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
++ +VFD M+ V+P+ A+ + ++ K++ D A V+ + M + VP TY+
Sbjct: 291 IKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVK-GYVPNSITYN 349
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ C E E+A E M G Q +++ + G ++K QK+ S
Sbjct: 350 LVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSG 409
Query: 202 VRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLK 238
N +T I+ S V S DL + N +++
Sbjct: 410 DCLPNLDTYNIL---ISAMFVRKKSDDLLVAGNLLIE 443
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G V D M S V+PN + T+V D D A + +M E VP + TY+ L
Sbjct: 397 GAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQM-KELGCVPNVCTYNNVL 455
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ +E ++ M L G ++ +L V E G+ + V Q L++++
Sbjct: 456 VLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMK 510
>gi|399107194|gb|AFP20361.1| At1g03560-like protein, partial [Capsella grandiflora]
gi|399107216|gb|AFP20372.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 46 YESAHS-------QNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNV 97
+E AHS +N R S +N L+ LC D +KD + D+ +S+
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD-RAKD--------LVDEFVSSGF 362
Query: 98 IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAY 157
+P+ + + +A + D AF L+K M+ + P L TY+ + C+ + EKAY
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGK-GCTPNLVTYNTLIDGLCKASKTEKAY 421
Query: 158 EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
E+ E + G + ++ + GR++K + ++ +
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G + D+ML P+EA+V+S+ + + A L+KR+ EF V P + Y+ +
Sbjct: 316 GLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA-EFGVSPNIFVYNALI 374
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C+ ++A + + MG +GL + L+ + G+++ +L ++
Sbjct: 375 DSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
>gi|410048166|ref|XP_003952521.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Pan troglodytes]
gi|410048168|ref|XP_003952522.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Pan troglodytes]
Length = 211
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 304 FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
F+++++ ++ ++DG N+ E L VV +L +++ L
Sbjct: 19 LKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKQNLRLLVLGRK 74
Query: 364 HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMR 421
H R S W R+ +EE ++ + S DD + LYA + C +T D MR
Sbjct: 75 HMLRRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMR 130
Query: 422 DH---IFELLGSNFFLKWKERHQ 441
DH + + F KW++ HQ
Sbjct: 131 DHKACLPDAKTQRLFFKWQQGHQ 153
>gi|302810233|ref|XP_002986808.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
gi|300145462|gb|EFJ12138.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
Length = 587
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K+ DL+ +Y++A Q LR L +N +L+ + +++ + H ++ +ML+
Sbjct: 418 KAGDLSKVEEVYQAATGQGLRPDLALYNIVLH-----GLSGAKQEAGVAH---LWAEMLN 469
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
N V P+ A+ T + N A +I +M + V+P TY+ L C C+N +
Sbjct: 470 NGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQ-GVLPDAITYNTLLHCLCKNELLD 528
Query: 155 KAY----EVEEH 162
+A+ E+++H
Sbjct: 529 EAHLLLREMKQH 540
>gi|299116865|emb|CBN74977.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 724
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFV--LIKRMNNEFNVVPRLRTYDPALF 145
+ D+ML+ V PN AS SV + A + G + V L++RM + P +R+++ A+
Sbjct: 310 LLDRMLATGVSPNVASYNSV--MTACDHMGQWRQVLGLLRRMEETGGIQPSVRSFNIAIK 367
Query: 146 CFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCV 205
++ + E A + M G+ + ++K + GRV+ L + S V
Sbjct: 368 AVGDSGDCEAALALFREMSATGIVPNMDSYSTVIKAFNQAGRVDGTVSGLLEEMSESMKV 427
Query: 206 NEETGKII 213
N E I+
Sbjct: 428 NPEADTIV 435
>gi|312380773|gb|EFR26676.1| hypothetical protein AND_07078 [Anopheles darlingi]
Length = 1906
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 261 VDESGKCCSCGDQLACVDIDDAETERFAQS-VAALAMEREV-----KANFSEFQDWLEKN 314
V + GKC C + L + + ER + + A+ + +E+ FQ +L+K
Sbjct: 278 VTDHGKCAHCKESLTSIVVPQESFERLKERFLEAVLISKEIFNKTTPEELGRFQKFLQKT 337
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVK 348
Y+ ++DG N+ N Q+ AVV+
Sbjct: 338 IPYDVVIDGLNVAFSSGNHKNPALYAKQIAAVVR 371
>gi|402875949|ref|XP_003901753.1| PREDICTED: mitochondrial ribonuclease P protein 3 isoform 2 [Papio
anubis]
Length = 565
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Query: 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNAN 316
ESG+C CG + + + E E + ++ F+++++
Sbjct: 326 ESGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKNTTPQELKRFENFIKSCPP 385
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRS---LWE 373
++ ++DG N+ + F + S L+ VV +L +++ L++L K + + W
Sbjct: 386 FDIVIDGLNVA---KMFPKARESQVLLN-VVSQLAKQNLR---LLVLGRKHMLTQSFQWR 438
Query: 374 NPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH---IFELL 428
++ + E ++ + + S DD + LYA + C +T D MRDH + +
Sbjct: 439 ----KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHKACLPDAK 494
Query: 429 GSNFFLKWKERHQ 441
F KW++ HQ
Sbjct: 495 TQRLFFKWQQGHQ 507
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 12/175 (6%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
KD + F+++ +M + PN + T++ N A L M E ++P
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV-ELKILPNE 540
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ + C +A+E+ + M GLS + L+ TGRV + +++
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIND 600
Query: 198 LRSTVRCVNE-----------ETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGG 241
L + ++E + G+I E + Q++ G + LV AVL +G
Sbjct: 601 LHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGA 655
>gi|189188980|ref|XP_001930829.1| CRO1 protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972435|gb|EDU39934.1| CRO1 protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 818
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 2 SNTTSTNPSKPNKKRKT---------NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQ 52
S+TT T P P T + NP F L S + + L + ++ ES+ Q
Sbjct: 571 SSTTGTTPFPPGALATTAQALSRLLISINPSHVFNAALPSTSAIRPLLSQLTRTESSTWQ 630
Query: 53 NLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR--VFDQMLSNNVIPNEASVTSVARL 110
LH F ALL L + ++ D S++D +R F V D +LSNN + AS + L
Sbjct: 631 -----LHAFEALLALTNLASLDRSTQDHIIRQSFDTVVDDLLLSNNTMIRRASTELICNL 685
Query: 111 AAS 113
AS
Sbjct: 686 MAS 688
>gi|399107206|gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 9/164 (5%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV 97
D A S++E L+ +N L+ + K + R+F++M +
Sbjct: 476 DFANAFSIFEDMIKSGLQPDRAIYNLLV--------EAFCKMGNMDRAIRIFERMQKERM 527
Query: 98 IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAY 157
P+ + + A D AF + M P + TY+ + + EKA
Sbjct: 528 QPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRS-GCAPTVMTYNALIHGLVRKHQVEKAV 586
Query: 158 EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
V + M + G++ + +++ A +G + K ++Y K++ +
Sbjct: 587 SVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 630
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
+ F +F+ M+ + + P+ A + + D A + +RM E + P RT+ P
Sbjct: 479 NAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKE-RMQPSNRTFRPI 537
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVR 203
+ F + ++A++ + M G + AL+ +VEK L K+
Sbjct: 538 IEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGI 597
Query: 204 CVNEETGKII 213
NE T II
Sbjct: 598 APNEHTYTII 607
>gi|84997836|ref|XP_953639.1| hypothetical protein [Theileria annulata]
gi|65304636|emb|CAI72961.1| hypothetical protein TA16515 [Theileria annulata]
Length = 857
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDW------LEKNANYE 318
G C C ++ DI D + ++ VK F F + + Y
Sbjct: 449 GLCDLCNTKINFQDISDPDRFEIFSNMLKTIFNTTVKEFFPLFNFYKFLLRGTVRGKPYT 508
Query: 319 AIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL----HNKRLRSL--W 372
I+DG N+G Y+ N ++ LDA +E +G PL++L +NK + L
Sbjct: 509 CIIDGQNVGFYKNNCWVLDWN-KLLDAFY--FFESAGEN-PLIVLPFRIYNKLMAHLEKM 564
Query: 373 ENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMR--DHI 424
+ PS +L + NE +Y+T + S DD Y+L A + + T DE++ DH
Sbjct: 565 DKPSF-DLFDILNENKSIYLTNNYSYDDNYFLLAGI----VKFTEDEIKLFDHF 613
>gi|341605727|gb|AEK82966.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605729|gb|AEK82967.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM BE P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIBE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 181 DLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANE---------LFDEMLVKG 231
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++P J TY+ ++ C+ + +A
Sbjct: 232 LVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-XLLPDJITYNTLVYGLCKKGDLNQA 290
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M GL ++ L+ + G ++ +++ +++
Sbjct: 291 HGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRM 332
>gi|399107212|gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN + T++ D A + K+M ++ +++P L
Sbjct: 199 KESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDL 257
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ ++ C+ + ++A+++ + M GL ++ L+ + G + +++ ++
Sbjct: 258 ITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKR 317
Query: 198 L 198
L
Sbjct: 318 L 318
>gi|399107204|gb|AFP20366.1| At1g03560-like protein, partial [Capsella grandiflora]
gi|399107210|gb|AFP20369.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|341605781|gb|AEK82993.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605783|gb|AEK82994.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIXLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|399107192|gb|AFP20360.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G + D+ML P+EA+V+S+ + + A L+KR+ +F V P L Y+ +
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV-DFGVSPNLFVYNALI 374
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C+ + +A + + MG +GL + L+ + G+++ +L ++ T
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT 431
>gi|326527577|dbj|BAK08063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 71/202 (35%), Gaps = 28/202 (13%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYL-CSDSAT---- 73
NP P L +C + D L +R H +NAL+ CSDS T
Sbjct: 136 NPAPRPALLALADACCRRGDPREIGQLLPVLADHGVRADAHVYNALMKAHCSDSDTAGLL 195
Query: 74 -----------DP----------SSKDSALRHGFRVFD-QMLSNNVIPNEASVTSVARLA 111
DP + L R + M + + P+ + TS+
Sbjct: 196 GVLRRMKDDGVDPDLVTYNTLVYGLARAGLVAKARTYPGAMAAEGLFPDVITYTSLMNGM 255
Query: 112 ASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE 171
K D A L+ M P RTY+ L C+N + + A EV + + G+ LE
Sbjct: 256 CVKGDALGALKLLDEMEAN-GCEPNDRTYNTLLMGLCKNRKLDNAVEVYKSIVGAGMKLE 314
Query: 172 QQEIAALLKVSAETGRVEKVYQ 193
A ++ GRV Y+
Sbjct: 315 PPAYATFIRALCRAGRVPDAYE 336
>gi|302771776|ref|XP_002969306.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
gi|300162782|gb|EFJ29394.1| hypothetical protein SELMODRAFT_61378 [Selaginella moellendorffii]
Length = 587
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K+ DL+ +Y++A Q LR L +N +L+ + +++ + H ++ +ML+
Sbjct: 418 KAGDLSKVEEVYQAATGQGLRPDLALYNIVLH-----GLSGAKQEAGVAH---LWAEMLN 469
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCEN 150
N V P+ A+ T + N A +I +M + V+P TY+ L C C+N
Sbjct: 470 NGVSPSVATYTILIHALCRDNRLQAARQIIDKMKGQ-GVLPDAITYNTLLHCLCKN 524
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 55 RLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASK 114
R SL +NA++ +C++ ++D+ FR+F+ M+ + V+P+ ++ ++ A K
Sbjct: 304 RKSLITWNAMMMVCANHGY---AEDA-----FRLFEGMIGSGVVPDGVTILALLVAYAHK 355
Query: 115 NDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE 174
D L + M ++ V PR+ Y + + ++AY + M + +
Sbjct: 356 GFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGA 415
Query: 175 IAALLKVSAETGRVEKVYQYLQKLR 199
+ ++ + G E+V + L +L+
Sbjct: 416 LLGACRIHGDVGMGERVIKKLLELK 440
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN T++ D A + K+M ++ +++P L TY+ ++ C+ + ++
Sbjct: 243 LVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGDLKQV 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQM 343
>gi|341605703|gb|AEK82954.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605705|gb|AEK82955.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605709|gb|AEK82957.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605813|gb|AEK83009.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605815|gb|AEK83010.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605817|gb|AEK83011.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605819|gb|AEK83012.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|399107208|gb|AFP20368.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGXVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA 120
FNAL+ D K + V D M N V PN + + K D A
Sbjct: 368 FNALI--------DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419
Query: 121 FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180
L+ +M E + P L TY+ + C+ + A+ + M G +Q+ A +
Sbjct: 420 MALLNKMY-ENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFID 478
Query: 181 VSAETGRVEKVYQYLQKLR 199
+ G+VE+ +Q + L+
Sbjct: 479 CLCKMGKVEQAHQVFESLK 497
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K LR G+++F+QML N + P+ + A K D A L + M + + P +
Sbjct: 20 KQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVS-VGLEPSI 78
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
TY+ L FC+ + ++A E+ + M G + + ++ +TG+V + + L
Sbjct: 79 YTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML 136
>gi|242049778|ref|XP_002462633.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
gi|241926010|gb|EER99154.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
Length = 466
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 64 LLYLCSDSATDP-----------SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAA 112
LL +C D+ P ++ ++ H ++FD+ML + P + ++
Sbjct: 135 LLVVCHDAGIPPDACTYNILMRAAAASGSVDHARQLFDEMLRRGIAPTVVTFGTLVAALC 194
Query: 113 SKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM-GLMGLSLE 171
+ AF + + M +++V+P Y + CE + + A ++E M G L L+
Sbjct: 195 DAGQLEDAFDMKEVMVRQYDVLPNAYVYTSLMKGLCEKGDVDAALRLKEEMAGKADLVLD 254
Query: 172 QQEIAALLKVSAETGRVEKVYQYLQKLR 199
A L++ GR V L++++
Sbjct: 255 SAVYATLVRPLFRVGRKGAVVGLLEEMK 282
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSA 81
+ N+ I L C + DL L+ N+ ++++ +L+Y LC +
Sbjct: 1042 QINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALC---------RHRN 1092
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140
L+ VF+ ML N + PN + T + + + AF+ + RM+ +VP L Y
Sbjct: 1093 LQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMY 1151
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 37 KDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSN 95
K+ +A+SL+ESA S+N S H F+ +L L +DS + H R+ D + +
Sbjct: 24 KNPLSALSLFESA-SRNKSHSAHVFHHILRRLAADS--------RLVSHVSRIVDIVKAQ 74
Query: 96 NVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK 155
E +V + A + A + M + F P +R+Y+ L F E E ++
Sbjct: 75 KCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDR 134
Query: 156 AYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
A + M +S Q L+K+S + ++EK L
Sbjct: 135 AESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLL 174
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALR 83
+F + L++ + L++A+++++ R SL N LL S DP
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG-DPGM------ 201
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVL-----IKRMNNEFNVVPRLR 138
V+ QM V+P+E +V +A+ A DG A + ++ M E N+V
Sbjct: 202 -AAMVYGQMRIAGVLPDEFTVAIMAK--AYCRDGRVAQAVEFVEEMEGMGLEVNLV---- 254
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y + C+C E A + E + GLS L+K + GR+E+ + ++++
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 199 RSTVRCVNEETGKIIEDWFS-GQKVNGVSCDLGLVKNA 235
+ ETG I+ D + G +NG C G + +A
Sbjct: 315 K--------ETGDIVVDEVAYGMMINGY-CQRGRMDDA 343
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 25 NFLIN--LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
N LIN ++SC L AI L + LR + +N L+ CS ++S L
Sbjct: 303 NTLINAKVKSCATVSGL--AIELLDEVGKFGLRPDIITYNTLISACS--------RESNL 352
Query: 83 RHGFRVFDQMLSNNVIPN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
+ VF M SN P+ A ++ R + ++ F +K +N F+ P
Sbjct: 353 KEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALK-AEHLFEKLK--SNGFS--PDAV 407
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY+ L+ F + EK ++ E M MG ++ ++ + + GR ++ + + +
Sbjct: 408 TYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDM 467
Query: 199 RSTVRCVNEETGKIIEDWF 217
+S+ R + T ++ D
Sbjct: 468 KSSGRNPDAVTYTVLIDLL 486
>gi|341605697|gb|AEK82951.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 29/218 (13%)
Query: 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALR 83
+F + L++ + L++A+++++ R SL N LL S DP
Sbjct: 149 VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSG-DPGM------ 201
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVL-----IKRMNNEFNVVPRLR 138
V+ QM V+P+E +V +A+ A DG A + ++ M E N+V
Sbjct: 202 -AAMVYGQMRIAGVLPDEFTVAIMAK--AYCRDGRVAQAVEFVEEMEGMGLEVNLV---- 254
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y + C+C E A + E + GLS L+K + GR+E+ + ++++
Sbjct: 255 AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM 314
Query: 199 RSTVRCVNEETGKIIEDWFS-GQKVNGVSCDLGLVKNA 235
+ ETG I+ D + G +NG C G + +A
Sbjct: 315 K--------ETGDIVVDEVAYGMMINGY-CQRGRMDDA 343
>gi|15227061|ref|NP_178392.1| F-box protein [Arabidopsis thaliana]
gi|75223210|sp|O80608.1|FB96_ARATH RecName: Full=Putative F-box protein At2g02890
gi|3461816|gb|AAC32910.1| predicted by genscan [Arabidopsis thaliana]
gi|330250546|gb|AEC05640.1| F-box protein [Arabidopsis thaliana]
Length = 531
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 25/53 (47%)
Query: 120 AFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQ 172
AF L F+V Y PAL CFCE + K YEVE HM LE+
Sbjct: 75 AFTLSLASTAAFSVFSLASAYAPALLCFCETFGSLKGYEVENHMNASVTMLEE 127
>gi|260780430|gb|ACX50761.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780496|gb|ACX50794.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 188
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + + A L+ RM +E P + T+ + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|241690293|ref|XP_002411751.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504586|gb|EEC14080.1| conserved hypothetical protein [Ixodes scapularis]
Length = 306
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 271 GDQLACVDIDDAETERFAQSVAALAME------REVKANFSEFQDWLEKNANYEAIVDGA 324
G+ L DAE E +V A M+ +F+ +L + +++ ++DG
Sbjct: 59 GNLLLDTRTRDAEFEELRLAVLASIMKGSDLFLNTTPRELEDFERFLSRAPSFDVVIDGL 118
Query: 325 NIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEW 384
N+ L + N G L VVK + K ++++ K +R W RN++++
Sbjct: 119 NVAL-KGNANSNGDKARNLLLVVK--HYTLVEKRKVLVVGRKHMRK-WP----RNVMDQV 170
Query: 385 NEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDHIFEL-----LGSNFFLKWK 437
V Y+T S DD + L AA ++ + D MR+H ++L +G + F KW+
Sbjct: 171 WSHCVYYLTNDLSEDDPFLLCAAFSRGPGTVVASRDLMRNHRYKLHEDSRMG-DLFDKWR 229
Query: 438 ERHQ 441
HQ
Sbjct: 230 RTHQ 233
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 84 HGFRVFDQ----MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
H FR DQ M S P+E + R+ + N G + + ++M N+F V PR+
Sbjct: 178 HQFRAADQLPELMESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFL 237
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y+ + + A V + + GL E L+K + GR++++ + L ++R
Sbjct: 238 YNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMR 297
>gi|341605701|gb|AEK82953.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|308810889|ref|XP_003082753.1| pentatricopeptide (ISS) [Ostreococcus tauri]
gi|116061222|emb|CAL56610.1| pentatricopeptide (ISS) [Ostreococcus tauri]
Length = 923
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 22 PET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDS 80
P+T F + +C + + A+ LY + + SL + +L+ S S + S
Sbjct: 455 PDTITFNTLIHACASNGEDGKAMELYRDMLANGVPPSLRTYVSLIVSLS-----RSKRGS 509
Query: 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140
+ R+FD + + V PNE TS+ N AF +RM E +V TY
Sbjct: 510 QVEEAERLFDVAIEDGVEPNEFLFTSLMDAQVKANRPFAAFDTYERMR-EADVSRTTVTY 568
Query: 141 DPAL-FCFCENLE---AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
AL C+ + E E+AY + M G+ + L+V + GR+E++ + ++
Sbjct: 569 GCALQACYYVDDEEDGVERAYAILRDMTESGVQMNDWCSNTFLRVISRAGRIEEMLEEVK 628
Query: 197 KLRSTVRCVNEETGKII 213
K+ + +ET + I
Sbjct: 629 KIVRRKGMLEQETFEAI 645
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 15 KRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATD 74
+R NPN + + I + K K + A++L++ H N+ + +N+L+ D
Sbjct: 345 QRGVNPNIHS-YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI--------D 395
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
K + + ++ D+M V ++ + S+ + D A L+ +M +E +
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE-GIQ 454
Query: 135 PRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194
P + TY + C+N E A V E + + G L+ A+++ G ++
Sbjct: 455 PDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL 514
Query: 195 LQKLRSTVRCVNEETGKII 213
L K+ N T +II
Sbjct: 515 LSKMEENGCIPNAVTYEII 533
>gi|341605723|gb|AEK82964.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIXGLGKAGRIDEAERLFEEM 148
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
V D+M V PN S T++ + AS + AF +KR+ NE P + +Y L
Sbjct: 463 VIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRV-NEITQKPPIISYASLLKAC 521
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
C+ + A V E M G+ + LL A+ G + + Y +QK+R
Sbjct: 522 CKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMR 573
>gi|341605721|gb|AEK82963.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605821|gb|AEK83013.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIXGLGKAGRIDEAERLFEEM 148
>gi|341605713|gb|AEK82959.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605715|gb|AEK82960.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605717|gb|AEK82961.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605719|gb|AEK82962.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605755|gb|AEK82980.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605757|gb|AEK82981.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605759|gb|AEK82982.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605827|gb|AEK83016.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605829|gb|AEK83017.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|399107190|gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|341605695|gb|AEK82950.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|341605691|gb|AEK82948.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605825|gb|AEK83015.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|341605761|gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIXLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|167998422|ref|XP_001751917.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697015|gb|EDQ83352.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1216
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ +C+++ ++ A+ +Y+ S + + + A ++ CS L ++
Sbjct: 738 IAACSRAGEVERALEVYKRMRSSKVSGTTECYTAAVHACSHKGY--------LNIALSIY 789
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
D M + V P+E ++ +A D AF +++ M N P TY+ + +
Sbjct: 790 DDMREDGVQPDEVFFCAMMDVAGHAGKIDVAFAILQEMKN-IGTKPSPVTYNTLMVACSK 848
Query: 150 NLEAEKAYEVEEHMGLMGL 168
+AE A V E + +GL
Sbjct: 849 VDDAENAMRVYEEIKALGL 867
>gi|260765969|gb|ACX50015.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765971|gb|ACX50016.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765973|gb|ACX50017.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765975|gb|ACX50018.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765977|gb|ACX50019.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765979|gb|ACX50020.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765981|gb|ACX50021.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765983|gb|ACX50022.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765985|gb|ACX50023.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765987|gb|ACX50024.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765989|gb|ACX50025.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765991|gb|ACX50026.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765993|gb|ACX50027.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765995|gb|ACX50028.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765997|gb|ACX50029.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260765999|gb|ACX50030.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766001|gb|ACX50031.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766003|gb|ACX50032.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766005|gb|ACX50033.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766007|gb|ACX50034.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766009|gb|ACX50035.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766011|gb|ACX50036.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766013|gb|ACX50037.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766015|gb|ACX50038.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766017|gb|ACX50039.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766019|gb|ACX50040.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766021|gb|ACX50041.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766023|gb|ACX50042.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766025|gb|ACX50043.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766027|gb|ACX50044.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766029|gb|ACX50045.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766031|gb|ACX50046.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766033|gb|ACX50047.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766035|gb|ACX50048.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766037|gb|ACX50049.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766039|gb|ACX50050.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766041|gb|ACX50051.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766043|gb|ACX50052.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766047|gb|ACX50054.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260766049|gb|ACX50055.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780310|gb|ACX50701.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780312|gb|ACX50702.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780318|gb|ACX50705.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780330|gb|ACX50711.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780332|gb|ACX50712.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780338|gb|ACX50715.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780340|gb|ACX50716.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780344|gb|ACX50718.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780346|gb|ACX50719.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780348|gb|ACX50720.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780394|gb|ACX50743.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780396|gb|ACX50744.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780398|gb|ACX50745.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780400|gb|ACX50746.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780402|gb|ACX50747.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780404|gb|ACX50748.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780406|gb|ACX50749.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780408|gb|ACX50750.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780410|gb|ACX50751.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780412|gb|ACX50752.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780414|gb|ACX50753.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780416|gb|ACX50754.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780418|gb|ACX50755.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780420|gb|ACX50756.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780422|gb|ACX50757.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780424|gb|ACX50758.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|341605711|gb|AEK82958.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605785|gb|AEK82995.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605787|gb|AEK82996.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605789|gb|AEK82997.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605793|gb|AEK82999.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605795|gb|AEK83000.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
L ++ +N L+ H FNA++Y LC D +S+ VF +M ++ ++P+ S
Sbjct: 267 LIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE---------VFKEMKNSGILPDVYS 317
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
+ + K D A + K M N ++P + +Y + FC+ +KA EV E M
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNS-GILPNIYSYSILIDGFCKEGRVDKALEVFEEM 376
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
G+ + + L+ G ++ ++ +++ S
Sbjct: 377 KNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTS 413
>gi|341605777|gb|AEK82991.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605779|gb|AEK82992.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605809|gb|AEK83007.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605811|gb|AEK83008.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|260780426|gb|ACX50759.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780428|gb|ACX50760.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780432|gb|ACX50762.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780434|gb|ACX50763.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780436|gb|ACX50764.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780438|gb|ACX50765.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780440|gb|ACX50766.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780442|gb|ACX50767.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780444|gb|ACX50768.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780446|gb|ACX50769.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780448|gb|ACX50770.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780450|gb|ACX50771.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780452|gb|ACX50772.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780454|gb|ACX50773.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780456|gb|ACX50774.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780458|gb|ACX50775.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780460|gb|ACX50776.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780462|gb|ACX50777.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780464|gb|ACX50778.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780466|gb|ACX50779.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780470|gb|ACX50781.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780472|gb|ACX50782.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780474|gb|ACX50783.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780476|gb|ACX50784.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780478|gb|ACX50785.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780480|gb|ACX50786.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780482|gb|ACX50787.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780486|gb|ACX50789.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780488|gb|ACX50790.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780490|gb|ACX50791.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780492|gb|ACX50792.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780494|gb|ACX50793.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780498|gb|ACX50795.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780500|gb|ACX50796.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780502|gb|ACX50797.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780504|gb|ACX50798.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + + A L+ RM +E P + T+ + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHG 85
+ + +Q+C K+ DL A SL + L + + L S K +
Sbjct: 271 YSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS-------VKQGNMDDA 323
Query: 86 FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALF 145
R+ D+MLS+ + N + TS+ ND A VL +M E P T+ +
Sbjct: 324 IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE-GPSPNSVTFSVLIE 382
Query: 146 CFCENLEAEKAYEVEEHMGLMGLS 169
F +N E EKA E + M ++GL+
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLT 406
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+FD+ML ++PN T++ D A + K+M ++ ++ P L TY+ ++
Sbjct: 234 LFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGL 292
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C+ + ++A+ + + M GL ++ L+ + G ++ +++ +++
Sbjct: 293 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRM 343
>gi|330934400|ref|XP_003304531.1| hypothetical protein PTT_17160 [Pyrenophora teres f. teres 0-1]
gi|311318772|gb|EFQ87354.1| hypothetical protein PTT_17160 [Pyrenophora teres f. teres 0-1]
Length = 818
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 2 SNTTSTNPSKPNKKRKT---------NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQ 52
S+TT T P P T + NP F L S + + L + ++ ES+ Q
Sbjct: 571 SSTTGTTPFPPGALATTAQALSRLLISINPSHVFNAALPSSSAIRPLLSQLTRTESSTWQ 630
Query: 53 NLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR--VFDQMLSNNVIPNEASVTSVARL 110
LH F ALL L + ++ D S++D +R F V D +LSNN + A+ + L
Sbjct: 631 -----LHAFEALLALTNLASLDRSTQDHIIRQSFDTVVDDLLLSNNTMIRRAATELICNL 685
Query: 111 AAS 113
AS
Sbjct: 686 MAS 688
>gi|341605803|gb|AEK83004.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605805|gb|AEK83005.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605823|gb|AEK83014.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYXVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|341605775|gb|AEK82990.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605807|gb|AEK83006.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC + D +++ +FD+ML
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANE---------LFDEMLVXG 225
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++P + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 226 LVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNTLIYGLCKKGBLKQA 284
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + M L G ++ L+ + G ++ +++ +++
Sbjct: 285 HVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRM 326
>gi|242079533|ref|XP_002444535.1| hypothetical protein SORBIDRAFT_07g023405 [Sorghum bicolor]
gi|241940885|gb|EES14030.1| hypothetical protein SORBIDRAFT_07g023405 [Sorghum bicolor]
Length = 92
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 309 DWLEKNANYEAIV---DGANIGLYQQNFTEGGFSVPQLDAVVKKLYERS-GNKWPLVILH 364
+WL + ++A++ D AN+ LY FS Q+++VV + + K PL+ILH
Sbjct: 1 NWLCCHGPFDAVIQLIDVANVDLYNSK----AFSFSQVNSVVNAIQRVTKSKKLPLIILH 56
Query: 365 NKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHG 396
R+ + P ++ ++E W G LY T G
Sbjct: 57 RNRVNGGPAKAPYNQKILESWRNAGALYTTAPG 89
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+FD+ML ++PN T++ D A + K+M ++ ++ P L TY+ ++
Sbjct: 217 LFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGL 275
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C+ + ++A+ + + M GL ++ L+ + G ++ +++ +++
Sbjct: 276 CKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRM 326
>gi|440794290|gb|ELR15456.1| pentatricopeptide repeat domain/PPR repeatcontaining protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 551
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 70/169 (41%), Gaps = 8/169 (4%)
Query: 33 CTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQM 92
C K DLT A+ + ++ ++ ++ + +L+ +C ++ L+ + ++M
Sbjct: 145 CCKRNDLTQALRVLAEMRNEGVKPNIFTYASLVNICE--------REKNLKKALDLLEEM 196
Query: 93 LSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLE 152
N+ PN TS+ + K D A L M + + P T++ L E +
Sbjct: 197 KDENIQPNVYIYTSLINVCEKKRDLVTAMKLFDDMTRLYRIRPNTFTFNSLLNVCVEKRD 256
Query: 153 AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
++ EV M + +L + A+TG K + L +++T
Sbjct: 257 LDRGMEVLALMRQHQVVPNTSTFNSLASLCAKTGNAAKGLELLATMKTT 305
>gi|260831350|ref|XP_002610622.1| hypothetical protein BRAFLDRAFT_65812 [Branchiostoma floridae]
gi|229295989|gb|EEN66632.1| hypothetical protein BRAFLDRAFT_65812 [Branchiostoma floridae]
Length = 523
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 269 SCGDQLACVDIDDAETERFAQSVAALAMERE------VKANFSEFQDWLEKNANYEAIVD 322
+C +L D+ D E SV + + +F D+++ +Y+ +VD
Sbjct: 288 ACATRLEGTDLTDEEFHLLHDSVLRRVIHGKDIFRSTTPEELKKFLDFIKDRNDYDVVVD 347
Query: 323 GANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPS-HRNLV 381
G N+ Y + +S L VV+ L ++ G +++L K ++ + + R+ +
Sbjct: 348 GLNVA-YAFGSKQKKYSRTLL-KVVEHLVQQLG--LHVLVLGRKHMKVTTAHGAWRRSDM 403
Query: 382 EEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH--IFELLGSNFFLKWK 437
+ L++T + S DD Y L A + ++ D MRDH + + FLKW
Sbjct: 404 DTIESLADLFLTDNVSKDDPYLLSATLSCGPHARFISGDFMRDHKALLDNFVQRLFLKWL 463
Query: 438 ERHQ 441
HQ
Sbjct: 464 RGHQ 467
>gi|399107198|gb|AFP20363.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ G ++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC + D +++ +FD+ML
Sbjct: 192 DLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ +++P L TY+ ++ C+ + ++A
Sbjct: 243 LVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLLPDLITYNXLIYGLCKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ M + GL ++ L+ + G ++ +++ ++
Sbjct: 302 NDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRM 343
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVR- 203
CF + E +KA+E+ E MG G+ L ++ L+ + RV+K Q K+R
Sbjct: 238 LCFSKLGEVDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSF 297
Query: 204 --------------CVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAV 236
C N++T + I FS K GV D+G++ +
Sbjct: 298 TPDVSLYDVLIGGLCKNKDTDRAI-SLFSEMKEFGVRPDIGILTKLI 343
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 96/218 (44%), Gaps = 16/218 (7%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSA 72
KKRK P+ + + + + K + + A++L + ++ + +N+L+ LC
Sbjct: 362 KKRKITPDRKVYNAV-IYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHK 420
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
D + + +FD+ML ++ P + + R+ +K + F L+ +M E
Sbjct: 421 VDEAKQ---------LFDEMLKRHLSPTIQTFHAFFRILRTKEE---VFELLDKMK-ELR 467
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
P + TY + FC + + +++ + M +S ++ L+ G++E+
Sbjct: 468 CYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQ 527
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSG-QKVNGVSCDL 229
+Y +++ +T ++++ W SG Q G DL
Sbjct: 528 RYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQEKDL 565
>gi|260780468|gb|ACX50780.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780484|gb|ACX50788.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKRIQVPPHAFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + + A L+ RM +E P + T+ + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDVVTFSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S P K + +FD ML + P+ + ++ +A + + F L+ +M
Sbjct: 349 NSLIGPLCKARQFQEAMEMFDAMLQRKLSPSVRTFHALLNVARNSTE---VFDLLDKMK- 404
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+ P + TY + FC E E ++ M GLS ++ L+ GR+E
Sbjct: 405 QLRCEPEMDTYIMLIRKFCRWREHESVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLE 464
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGG 242
+ +Y ++++S ++T +++ W G++ L K +V+ + GG
Sbjct: 465 EAARYYEEMKSKGFLPEKKTEEMVMAWLEGRE---------LAKASVISSKGG 508
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ + ++ L+ LC +S D +++ +F++ML
Sbjct: 186 DLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANE---------LFNEMLDKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M + P L TY+ ++ C + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQ-GYSPDLITYNTLIYGLCRKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++ M + GL ++ L+ S + G +E ++ +++
Sbjct: 296 RDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRM 337
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHG 85
+ I +++ K++ + A+ +YE + + + F+ L+Y+ S L
Sbjct: 276 YSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGR--------LNDA 327
Query: 86 FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV-PRLRTYDPAL 144
+ VF+ M ++ V + + ++ A + G+ A L++RM E N P L TY P L
Sbjct: 328 WYVFEDMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERM--EVNSCKPDLETYQPLL 385
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
C+ + + + HM + ++ A L++ AE+G++E + Q
Sbjct: 386 KMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFFFQ 437
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L + FR++ +M + PN + T++ N A L M E+NV+P
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV-EWNVIPNE 530
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ + C+ +A+E+ + M GL + L+ TGRV + +++
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590
Query: 198 LRSTVRCVNE 207
L+ + +NE
Sbjct: 591 LQGEQQKLNE 600
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G + ++M+ +P+EA+V+++ K + AF L+ ++ +F V P L Y+ +
Sbjct: 304 GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK-KFGVAPSLFVYNALI 362
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C++ + ++A + +MG GL + L+ + G+++ +L K+
Sbjct: 363 NSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 192 DLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 242
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
+IPN + T++ D A + K+M ++ ++P L TY+ ++ + + ++A
Sbjct: 243 LIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-CLLPDLITYNTLIYGLXKKGDLKQA 301
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+++ + M + GL ++ L+ + G ++ +++ +++
Sbjct: 302 HDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRM 343
>gi|125531299|gb|EAY77864.1| hypothetical protein OsI_32907 [Oryza sativa Indica Group]
Length = 1089
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 538 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 589
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 590 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 648
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 649 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 707
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 61 FNALLYLCSDSATDPSSKDS---------ALRHGFRVFDQMLSNNVIPNEASVTSVARLA 111
F A+LY + P DS LR+ VF QM +P S + +
Sbjct: 97 FEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISAS 156
Query: 112 ASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
S GD A + M + + P + T + + FC+ + EKA EV + M MG S
Sbjct: 157 ISLQRGDIALTFYREMQ-RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFS 213
>gi|260780324|gb|ACX50708.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780342|gb|ACX50717.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780358|gb|ACX50725.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780388|gb|ACX50740.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KQGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K +L+ A+S ++ + L+ ++ + +L+ L FR++ +M
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLI--------SGYCNKGKLHEAFRLYHEMTG 499
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
+ PN + T++ N AF L M + N++P TY+ + C+
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ-NMMPNEVTYNVMIEGHCKEGNTV 558
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
KA+E+ M GL + L+ TGRV + +++ L
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 33 CTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQM 92
C K K L A LY + + + + F L+ SA +++ + FR+FD+M
Sbjct: 482 CNKGK-LHEAFRLYHEMTGKGIAPNTYTFTTLI-----SALFRANR---MTDAFRLFDEM 532
Query: 93 LSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLE 152
L N++PNE + + + + AF L+ +M + +VP TY P + C
Sbjct: 533 LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK-GLVPDTYTYRPLISSLCSTGR 591
Query: 153 AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRV 188
+A + + + L + +ALL + GR+
Sbjct: 592 VCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G V D+M+ +P EA+++S+ K AF L+ R+ + +P L Y+ +
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRV-KKVGAMPSLFVYNALI 373
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C++ + ++A + + MG GL + L+ G+++ +L K+
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKM 427
>gi|115481316|ref|NP_001064251.1| Os10g0181200 [Oryza sativa Japonica Group]
gi|113638860|dbj|BAF26165.1| Os10g0181200, partial [Oryza sativa Japonica Group]
Length = 1021
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 470 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 521
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 522 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 580
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 581 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 639
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 10/185 (5%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K+ +PN T F + K+ DL A+SLY+ + L++ + AL+
Sbjct: 190 KRDALSPNVVT-FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI-------- 240
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K ++ ++ +M+ + V PN T++ + D D A + +M N+ +
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ-GM 299
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+ Y + C N + ++A E+ E M L + ++ ++GR++
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 194 YLQKL 198
KL
Sbjct: 360 MYHKL 364
>gi|341605765|gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605767|gb|AEK82986.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605769|gb|AEK82987.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605771|gb|AEK82988.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 46 YESAHS-------QNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNV 97
+E AHS +N R S +N L+ LC D + + D+ +S+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKT---------LVDEFVSSGF 111
Query: 98 IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAY 157
+P+ + + +A + D AF L+K M+ P L TY+ + C+ + EKAY
Sbjct: 112 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGN-GCTPNLVTYNTLIDGLCKASKTEKAY 170
Query: 158 EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
E+ E + G + ++ + GR++K + ++ +
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 211
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VFD+ML +V PN + ++ + D A L + M FNV P Y +
Sbjct: 170 VFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGL 229
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
C E A+E+++ M L L+ + L+ + GR ++V+ L+++R
Sbjct: 230 CRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMR 281
>gi|18642701|gb|AAL76193.1|AC092173_5 Putative crp1 protein [Oryza sativa Japonica Group]
Length = 1089
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 538 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 589
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 590 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 648
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 649 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 707
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 78/185 (42%), Gaps = 11/185 (5%)
Query: 18 TNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPS 76
T+PN T N LIN K+ ++ +A+++Y+ + + F++L+ D
Sbjct: 336 TSPNVVTYNVLIN--GYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLI--------DGY 385
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
+ L +++ +M ++ PN + + +N A +K+MN ++ P+
Sbjct: 386 CRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQ 445
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
Y+P + C+ + ++A + M G ++ L+ GR+ + +
Sbjct: 446 AFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFH 505
Query: 197 KLRST 201
K+ T
Sbjct: 506 KMVET 510
>gi|341605763|gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSIFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+F +M N+IP+ + +S+ + YA L+ +M++ V P +RTY+ L
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR-GVPPTIRTYNSILDAL 445
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207
C+ + +KA + + G+ + L+K ++G++E + + L +N
Sbjct: 446 CKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNV 505
Query: 208 ETGKIIEDWF 217
+T I+ F
Sbjct: 506 DTYTIMIQGF 515
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 18 TNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSS 77
NP+ ++ + I + K K A++L++ H +N+ + +++L+ D S
Sbjct: 361 VNPDIQS-YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI--------DGLS 411
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + + ++ DQM V P + S+ + D A L+ ++ ++ + P +
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK-GIQPNM 470
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + C++ + E A +V E + + G +L +++ G + L K
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530
Query: 198 LRSTVRCVNEETGKII 213
+ + +T +II
Sbjct: 531 MEDNGCIPDAKTYEII 546
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 32/182 (17%)
Query: 39 LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98
L AI L+ +N++ ++ FN L+ + KD ++ G VFD M+ +
Sbjct: 276 LNDAIDLFNKMILENIKPDVYTFNILV--------NAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNE---FNVV------PRLRTYDPALFCFCE 149
PN + S+ DG + L+K +N FN + P +++Y + FC+
Sbjct: 328 PNFVTYNSLM-------DG---YCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCK 377
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR-----STVRC 204
+ ++A + + M + + ++L+ +++GR+ Q + ++ T+R
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437
Query: 205 VN 206
N
Sbjct: 438 YN 439
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 26/164 (15%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL------------------------ 65
L++ + K +T A ++Y S N R +L FN LL
Sbjct: 172 LRTLCQEKSMTDARNVYHSL-KHNFRPNLQTFNILLSGWKNVEDAELFVNEMKEMGVEPD 230
Query: 66 YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIK 125
+ +S D K + ++VFD+M ++ P+ + TSV D A ++K
Sbjct: 231 VVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLK 290
Query: 126 RMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
M E+ V P + Y+ A+ +C A+E+ + M GLS
Sbjct: 291 EMK-EYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLS 333
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VF+QM+ + V+P+ A+ ++ ++ K+ + A ++ + M VP TY+ +
Sbjct: 288 VFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR-GYVPNSITYNLVIRGL 346
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C E ++A E+ E M Q L++ + G +EK QK+
Sbjct: 347 CHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKM 397
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 57 SLHHFNALL-YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKN 115
S+ FNAL+ LC K ++ + +F++M+ +PN + V R
Sbjct: 300 SVATFNALIQILC---------KKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVG 350
Query: 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164
+ A L++RM ++ + P ++TY+ + FC+ E EK ++ + MG
Sbjct: 351 EMQRAMELMERMEDD-DCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMG 398
>gi|66806645|ref|XP_637045.1| hypothetical protein DDB_G0287775 [Dictyostelium discoideum AX4]
gi|60465449|gb|EAL63534.1| hypothetical protein DDB_G0287775 [Dictyostelium discoideum AX4]
Length = 611
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR 87
+ + +C K+ + A YE NL + FN+L+Y C+ S D F
Sbjct: 307 VMVDACAKNDLVEKAFQYYEEFKYLNLTPTEVTFNSLIYACAK-----RSDDHYYLKSFE 361
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGD-----YAFVLIKRMNNEFNVVPRLRTYDP 142
+ M + P+ + TS+ + AA + + Y +L R ++F P R +
Sbjct: 362 LLQDMALHKFKPDIITYTSLMKGAAKRGEVQVFEKIYRELLYNR--DDFKQKPDQRVFTC 419
Query: 143 ALFCFCEN---------------LEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187
ALF + N + EK+ +V + M G+ L + + LKV +GR
Sbjct: 420 ALFGYANNQIISKKTYLNKTGLSINIEKSEKVLQEMKERGIPLTKYPMDEYLKVLTHSGR 479
Query: 188 VEK 190
+ +
Sbjct: 480 LNR 482
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 53/112 (47%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VF++ML+N + PN S+ + + D +F ++ M + ++P Y +
Sbjct: 218 VFEKMLANGIKPNNHIFNSLFIVHMANGKVDESFQILNSMETTYGLLPDHINYTSLINGL 277
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+N + + A ++ + G+ + ++ ++ A+ VEK +QY ++ +
Sbjct: 278 VKNKKPKLAIQLFSEARIKGMQPDSVTLSVMVDACAKNDLVEKAFQYYEEFK 329
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+ QML +VIPN + +S+ K + A L+++M ++ NVVP TY +
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGL 444
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS---TVRC 204
+ + E A E+ + M L+G+ + AL+ GR+++V ++ + S T+
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Query: 205 VNEETGKIIEDWFSG 219
+N + +I+ +F G
Sbjct: 505 INYTS--LIDVFFKG 517
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
+ S +H F++ D+M V PN + + + A+ + +RM + P+L
Sbjct: 383 RASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGID-GCEPQL 441
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FC N + A +V + MG G+ +AL+ R+E+ Y Q+
Sbjct: 442 NTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQE 501
Query: 198 L 198
+
Sbjct: 502 M 502
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL L + + ++ ++ ++ L+ LC +S D ++ +F +ML
Sbjct: 183 KLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANG---------LFGEML 233
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N ++PN + T++ D A + ++M N+ P + TY+ ++ C+ +
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQ-GFSPDVVTYNTLIYGLCKKGDL 292
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
++A + + M GL ++ L+ S + G +E ++ +++
Sbjct: 293 KQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERM 337
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSK 78
PN T F + K+ L A+ +Y +Q + +N L+Y LC K
Sbjct: 239 PNGVT-FTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLC---------K 288
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
L+ + D+M + P++ + T++ + + D + AF L +RM E + +
Sbjct: 289 KGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDV- 347
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y +F C+ A A ++ M +GL + + ++ + G V+K + L+++
Sbjct: 348 VYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREM 407
Query: 199 RSTVR--CV 205
+ R CV
Sbjct: 408 QRNGRVPCV 416
>gi|260780314|gb|ACX50703.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780316|gb|ACX50704.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780320|gb|ACX50706.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780322|gb|ACX50707.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780326|gb|ACX50709.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780328|gb|ACX50710.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780334|gb|ACX50713.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780336|gb|ACX50714.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780350|gb|ACX50721.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780354|gb|ACX50723.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780356|gb|ACX50724.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780360|gb|ACX50726.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780362|gb|ACX50727.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780364|gb|ACX50728.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780366|gb|ACX50729.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780368|gb|ACX50730.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780370|gb|ACX50731.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780372|gb|ACX50732.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780374|gb|ACX50733.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780376|gb|ACX50734.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780378|gb|ACX50735.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780380|gb|ACX50736.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780382|gb|ACX50737.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780384|gb|ACX50738.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780386|gb|ACX50739.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780390|gb|ACX50741.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780392|gb|ACX50742.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGVQVPPHVFSLVIGGLC---------KQGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|215694797|dbj|BAG89988.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 930
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 379 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 430
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 431 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 489
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 490 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 548
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+ QML +VIPN + +S+ K + A L+++M ++ NVVP TY +
Sbjct: 388 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGL 446
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS---TVRC 204
+ + E A E+ + M L+G+ + AL+ GR+++V ++ + S T+
Sbjct: 447 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 506
Query: 205 VNEETGKIIEDWFSG 219
+N + +I+ +F G
Sbjct: 507 INYTS--LIDVFFKG 519
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + + ++ ++ ++ L+ LC +S D +++ +FD+ML
Sbjct: 173 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANE---------LFDEMLVKG 223
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A + K+M ++ ++ P L TY+ ++ C+ + ++A
Sbjct: 224 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQA 282
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + M + L ++ L+ + G ++ +++ +++
Sbjct: 283 HHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRM 324
>gi|328874148|gb|EGG22514.1| hypothetical protein DFA_04642 [Dictyostelium fasciculatum]
Length = 946
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 313 KNANYEAIVDGANIGLYQQNFTEGGFSV----PQLDAVVKKLYE-------------RSG 355
K Y ++DG N+ + N + SV LD + YE ++G
Sbjct: 806 KKKPYLVVIDGPNVAIKYSN-KKNSLSVIAIKKALDYYSHRGYEAVTFLPESVVSRKQTG 864
Query: 356 NKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLV 415
P+ RL + L++E EKG + +TP DD Y + A K L++
Sbjct: 865 PNAPM------RLADFQPMIDNHQLLQELIEKGQICITPPQDYDDSYAIQYAKKTNALII 918
Query: 416 TNDEMRDHI 424
TND DHI
Sbjct: 919 TNDRYNDHI 927
>gi|357138495|ref|XP_003570827.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17670-like [Brachypodium distachyon]
Length = 381
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
D M + P+ + TS+ K D A L++ M + P RTY+ L C
Sbjct: 246 VDAMAAEGHFPDVITYTSLMNGMCVKGDALGALKLLEEMEAK-GCEPNARTYNTLLMGLC 304
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+N + +KA EV M + LE A+ ++ GRV Y+
Sbjct: 305 KNRKLDKAVEVYRSMVGAAMKLETPAYASFIRALCRAGRVPDAYE 349
>gi|222612526|gb|EEE50658.1| hypothetical protein OsJ_30888 [Oryza sativa Japonica Group]
Length = 869
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 318 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 369
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 370 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 428
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 429 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 487
>gi|341605747|gb|AEK82976.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605749|gb|AEK82977.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605751|gb|AEK82978.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
KS D+ A L ++ L S ++ L+ LC S L+ V DQM+
Sbjct: 428 KSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC---------HSSDLQKANEVLDQMI 478
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N V PN ++ + ++ + A L+K M V+P L Y+ + C +
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN-GVLPDLFCYNCLIIGLCRAKKV 537
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
E+A + MG G+ A + + +++G ++ +Y + + S+
Sbjct: 538 EEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585
>gi|399107200|gb|AFP20364.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ G ++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
+ DL +A+ L+ + +++ F L+ C D D ++ R+FD+M+
Sbjct: 452 RKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAA---------RLFDKMI 502
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
++V+PNE + + + AF L +M + + P TY + C L A
Sbjct: 503 DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR-GLTPDNYTYRSLISVLCLTLGA 561
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
KA E + + + L + L+ + GR+ + Y ++R+
Sbjct: 562 MKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 22 PET---NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSS 77
P+T N LI+ KS D+ A L ++ L S ++ L+ LC
Sbjct: 414 PDTWTYNLLID--GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC--------- 462
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
S L+ V DQM+ N V PN ++ + ++ + A L+K M V+P L
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN-GVLPDL 521
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
Y+ + C + E+A + MG G+ A + + +++G ++ +Y +
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581
Query: 198 LRST 201
+ S+
Sbjct: 582 MLSS 585
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L+H VF M V PN T + K D A L + M ++ N+ P + TY
Sbjct: 557 LKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK-NMFPNIVTYT 615
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + M G+ + LL ++GR+E + Q+L
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VF M + V PN + T++ + D A L + M + N++P + TY +
Sbjct: 330 VFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK-NMIPDIVTYTSLIDGL 388
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207
C+N E+A + + M G+ + LL + GR+E ++ Q+L +N
Sbjct: 389 CKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNV 448
Query: 208 ETGKIIEDWFSGQKVNGVSCDL 229
+T ++ + + G + DL
Sbjct: 449 QTYNVMINGLCKADLFGEAMDL 470
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 29 NLQSCTKSKDL-TTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR 87
L SC ++ L A+ L+E R +NALL D K +
Sbjct: 255 TLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALL--------DVYGKSRRPKEAME 306
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
V QM SN+ P+ + S+ + A VL ++M ++ + P + TY L F
Sbjct: 307 VLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDK-GIKPDVYTYTTLLSGF 365
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ E A EV E M +G AL+K+ + G+ E++ + ++++
Sbjct: 366 VNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK 417
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 61 FNALLY-LCSDSATDPSSK-DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGD 118
+N LL +C ++ P + + +RH +VFD+M + P+ S + V + + + +
Sbjct: 241 YNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPE 300
Query: 119 YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
+ +K+M E + P + TY + C C E + E M G+S
Sbjct: 301 LSLDKLKQM-KELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGIS 350
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 33 CTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQ 91
C K K + A++L ++ + L +N+L+Y LC D FR+F
Sbjct: 471 CRKEK-VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRID---------EAFRLFHN 520
Query: 92 MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151
ML + + N + ++ + A L+ M + ++ TY+ + FC+
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI-TYNGLIKAFCKVG 579
Query: 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
EK E+ E M + GL + ++ + G+V+ +++L+
Sbjct: 580 NIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624
>gi|260780352|gb|ACX50722.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 199
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|399107188|gb|AFP20358.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E P + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ G ++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 33 CTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQ 91
C K K + A++L ++ + L +N+L+Y LC D FR+F
Sbjct: 471 CRKEK-VHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRID---------EAFRLFHN 520
Query: 92 MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151
ML + + N + ++ + A L+ M + ++ TY+ + FC+
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI-TYNGLIKAFCKVG 579
Query: 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
EK E+ E M + GL + ++ + G+V+ +++L+
Sbjct: 580 NIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
SK + +V+++ML ++P++ + + A + + A L + M + N+ P
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPD 601
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
+ T+ + C+ + E A ++ + MG +G+ AL+ ++GR+E+ Q+L+
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661
Query: 197 KLRST 201
++ S+
Sbjct: 662 EMVSS 666
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 11/174 (6%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
N LIN K+ + A + + A R ++ ++ ++ D +D+ +
Sbjct: 5 NVLIN--GLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVI--------DGLCRDNEVDK 54
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G ++ ++M PN + ++ + AF L++RM P L T+ +
Sbjct: 55 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAAN-GCPPELITFGLII 113
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C+ E E A+ V + M G + + LL E GRV++ + + Q++
Sbjct: 114 KGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167
>gi|341606821|gb|AEK83513.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 205
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|297742710|emb|CBI35344.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 410 LRCLLVTNDEMRDHIFELLGSNFFLKWKE 438
+ L++T+DEMRDHIF+LLG++FF K+
Sbjct: 26 FKRLIMTDDEMRDHIFQLLGNDFFPNGKK 54
>gi|341606823|gb|AEK83514.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|341606827|gb|AEK83516.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 207
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 84 HGF---RVFDQMLSNNVIPNEASVTSVARLAASKNDGDY--AFVLIKRMNNEFNVVPRLR 138
HGF +F QM S V PN+ +T VA L+A + G + +M+ EFN+ P++
Sbjct: 370 HGFAALELFKQMESTGVGPND--ITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVE 427
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y + C +A E+ M L + + KV T E V Y+QKL
Sbjct: 428 HYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKL 487
Query: 199 RS 200
S
Sbjct: 488 VS 489
>gi|110288710|gb|AAP52447.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215694798|dbj|BAG89989.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 735
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 184 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 235
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 236 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 294
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 295 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 353
>gi|357145938|ref|XP_003573820.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Brachypodium distachyon]
Length = 1084
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 534 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 585
Query: 90 DQMLS--------NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M + ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 586 SEMTAEPSESKGWKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 644
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ +R+
Sbjct: 645 IALRSCSLTGDLGFALKIYEDMNKIGVIPDEMFLSALVDVAGHARRADAAFEIIKDVRA 703
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
+M++ NV PN + +S+ D+A ++K M N+ V P + T++ + C
Sbjct: 383 IQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK-RVEPSVGTFNSVIGALC 441
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208
+ ++A+++ M GL LL+ + TGR+E Y+ + +R + +
Sbjct: 442 RLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSA 501
Query: 209 TGKIIEDWFSG 219
+ E FS
Sbjct: 502 ANLVPEQAFSA 512
>gi|255586885|ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525928|gb|EEF28334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1129
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+N++ FNAL+ C S A+ F V
Sbjct: 583 IDGCAKAGQMAKAFGAYGILRSKNVKPDRVVFNALITACGQSG--------AVDRAFDVL 634
Query: 90 DQM--LSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL-FC 146
+M ++ + P+ +V ++ + A D A + M +++N+ Y A+ FC
Sbjct: 635 AEMGAETHPIDPDHITVGALMKACAKAGQVDRA-KEVYNMLHKYNIKGTPEVYTIAVNFC 693
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
+ + E A V + M G++ ++ ++AL+ V+ G V+ ++ LQ+ R+
Sbjct: 694 -SQTGDWEFARSVYDDMTRKGVAPDEMFLSALVDVAGHAGLVDIAFETLQEART 746
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 9/223 (4%)
Query: 62 NALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
N ++Y + D KD + F ++ +M+S + PN + +++ + A
Sbjct: 226 NVVMY---STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAV 282
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
L +M +E N+ P + T++ + FC++ + A ++ + M G +++L
Sbjct: 283 DLFNKMISE-NIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDA 341
Query: 182 SAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGG 241
+T RV+K L KL+ N T I+ D G +G D + +L G
Sbjct: 342 LCKTHRVDKAVALLTKLKDQGIRPNMHTYTILID---GLCTSGKLEDARNIFEDLLVKGY 398
Query: 242 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAET 284
+ +I K+G DE+ S ++ C I DA+T
Sbjct: 399 DITVVTYIVMFYGFCKKGLFDEASALLSKMEENGC--IPDAKT 439
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/121 (19%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+S + +FD+ML ++PN + T++ D A + K+M ++ + P
Sbjct: 224 KESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ-XLXPDF 282
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ + C+ + +A+ + + M + GL ++ L+ + G ++ +++ ++
Sbjct: 283 ITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKR 342
Query: 198 L 198
+
Sbjct: 343 M 343
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/215 (17%), Positives = 87/215 (40%), Gaps = 28/215 (13%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCS------------------- 69
+ S K + +T A +L+ ++ + + +N+L++ LC+
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356
Query: 70 -------DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFV 122
+ D K+ + V D M+ V P+ + T++ +++ D A
Sbjct: 357 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 416
Query: 123 LIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182
+ M ++ VP +R+Y+ + +C+ +KA + E M L GL + L+
Sbjct: 417 VFDTMVHK-GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 475
Query: 183 AETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 217
GR++ ++ ++ + + T +I+ D+
Sbjct: 476 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 510
>gi|341605699|gb|AEK82952.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCXFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 71 SATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE 130
+ D K+ + V D M+ V P+ + T++ +++ D A + M ++
Sbjct: 327 TVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386
Query: 131 FNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
VP +R+Y+ + +C+ +KA + E M L GL + L+ GR++
Sbjct: 387 -GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445
Query: 191 VYQYLQKLRSTVRCVNEETGKIIEDWF 217
++ ++ + + T +I+ D+
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYL 472
>gi|224002623|ref|XP_002290983.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972759|gb|EED91090.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 192
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 24/81 (29%)
Query: 380 LVEEWNEKGVLYMTPHGSNDDWYWLYAAVK------------------------LRCLLV 415
++E EK +Y+ P DD YW+ A+ LR +++
Sbjct: 42 MLESLKEKDQMYVVPPMCLDDLYWMLASTSNQTTATNGTSIDVPKNNDEGRYPGLRPMVI 101
Query: 416 TNDEMRDHIFELLGSNFFLKW 436
+ND+MRDH ELL F +W
Sbjct: 102 SNDKMRDHRMELLEERAFRRW 122
>gi|156097330|ref|XP_001614698.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803572|gb|EDL44971.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1073
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
+Y ++DGANIG +QN G FS Q++ ++K++ +R + PL+IL
Sbjct: 514 GSYTCLLDGANIGYNKQNVENGRFSFLQIE-ILKEIIKRRNKETPLIIL 561
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
+ F + D+ML++ + P + + TS+ + + KN A L K++ +E V+P + ++
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDVIMFNA 471
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ C N + A+E+ + M M + ++ +++ G+VE+ + +++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 40 TTAISLYESAHSQNLRLS----LHHFNALLYLCS-DSATDPSSKDSALRHGFRVFDQMLS 94
+T +++Y H LS + N LL L + + D + + R+F M
Sbjct: 118 STILTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRK 177
Query: 95 NNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151
+ PN S ++ R+ A + + F L++R N E NVV TY+ + + + L
Sbjct: 178 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNTMMMIYGKTL 233
Query: 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
E EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 234 EHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|28558786|gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
PN T FL +++CT + +T SL H++ L+ + H F A+ D D
Sbjct: 312 PNKAT-FLSVIRACTHLRFRSTGQSL----HARVLKANFHEFVAIGTALMDMYAKSGDAD 366
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+AL ++F ++ +V+ A T ++ LA + G A + +RM E V P T
Sbjct: 367 TAL----KIFSKLRKKDVM---AWTTMISGLAI-QGKGKEALNVFRRMEEEAEVAPDQIT 418
Query: 140 YDPALF-CFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y L+ C L E M + G+ + ++ + + G E+ + L K+
Sbjct: 419 YIAVLWACSHLGLVEEGQKHFTSMMEVYGIEPTMEHYGCMIDLLSRAGHSEEAEELLVKM 478
>gi|302820653|ref|XP_002991993.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
gi|300140235|gb|EFJ06961.1| hypothetical protein SELMODRAFT_42424 [Selaginella moellendorffii]
Length = 331
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 84 HG-FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
HG + +F+QM+ V+PN A+ + + R + D L+++M E VP L T++
Sbjct: 140 HGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQM-VESGCVPELATFNA 198
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ C+ E A V M G S + LL+ + ++++ ++++Q++ +T
Sbjct: 199 VIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIAT 257
>gi|224137884|ref|XP_002326464.1| predicted protein [Populus trichocarpa]
gi|222833786|gb|EEE72263.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 107 VARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166
V RL + D A +++K+M EFN+ P Y+ + CE + + A ++ MGL+
Sbjct: 136 VLRLCKAGGLADEALMVLKKMP-EFNIRPDTTAYNVVIRSLCEKGDVDMAKKLMGEMGLI 194
Query: 167 GLSLEQQEIAALLKVSAETGRVEKVY 192
L + +++K + GR+E+ +
Sbjct: 195 DLYPDMITYVSMIKGFCDVGRLEEAF 220
>gi|302816300|ref|XP_002989829.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
gi|300142395|gb|EFJ09096.1| hypothetical protein SELMODRAFT_42426 [Selaginella moellendorffii]
Length = 331
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 84 HG-FRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
HG + +F+QM+ V+PN A+ + + R + D L+++M E VP L T++
Sbjct: 140 HGAYLLFEQMIEAGVLPNSATFSFLVRGCFKRGFLDEGSELLRQM-VESGCVPELATFNA 198
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ C+ E A V M G S + LL+ + ++++ ++++Q++ +T
Sbjct: 199 VIEGLCKVRRVENARWVMNEMASQGCSPDAATHRFLLEALCKMDKLDEAHRHVQRMIAT 257
>gi|341605745|gb|AEK82975.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRXNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|341605743|gb|AEK82974.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605753|gb|AEK82979.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605831|gb|AEK83018.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|357614026|gb|EHJ68862.1| hypothetical protein KGM_05784 [Danaus plexippus]
Length = 510
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 GWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDD---AETERFAQSVAALAMER 298
+ L +IG+ + K +SG C C +L C+ + + A +R + L +
Sbjct: 253 AFEELNFIGRFTQIKK-----QSGHCECCNLKLDCIKLSEDEFATLQRVVKEKLILGNDL 307
Query: 299 EVKANFSE---FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSG 355
+K + E F ++EK A Y+ ++D NI Y + + L+ VV +++
Sbjct: 308 FLKTSPEELKRFTSFVEKTAPYDIVLDALNIA-YSIGKGDVNERIKILNLVVNHFLDQNK 366
Query: 356 NKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAV--KLRCL 413
++ L + + S W+ + + V +K + T S DD Y++ AA+
Sbjct: 367 K---ILFLGRQHMLS-WKRGTLMHTV----KKVYSFFTDDISQDDPYFITAAILSGPETD 418
Query: 414 LVTNDEMRDHIFELLGSN---FFLKWKERHQ 441
+V+ D +R H F L N F W+ +HQ
Sbjct: 419 IVSRDLLRGHRFLLQHENLQRLFQMWQWQHQ 449
>gi|341605791|gb|AEK82998.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 18 TNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSS 77
NP+ ++ + I + K K A++L++ H +N+ + +++L+ D S
Sbjct: 361 VNPDIQS-YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI--------DGLS 411
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + + ++ DQM V PN + S+ + D A L+ + ++ P +
Sbjct: 412 KSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK-GFQPDI 470
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + C++ + E A +V E + + G +L+ +++ G + L K
Sbjct: 471 STYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSK 530
Query: 198 LRSTVRCVNEETGKII 213
+ + +T +II
Sbjct: 531 MEDNGCIPDAKTYEII 546
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 11/165 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K+K + A LY + + ++ +N L+Y C L+ F + ++M
Sbjct: 245 KNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGN---------LKEAFSLLNEMK 295
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N+ P+ + + + D A L + M ++ N+ P + TY + C+N
Sbjct: 296 LKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHK-NMFPNIVTYTSLIDGLCKNHHL 354
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
E+A + + M G+ + LL + GR+E Q+ Q L
Sbjct: 355 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHL 399
>gi|110288709|gb|ABG65945.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110288711|gb|ABG65946.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 614
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C K+ + A Y S+ ++ FNAL+ C +S A+ F V
Sbjct: 184 IDGCAKAGQVAKAFGAYGIMSSKKVKPDRVVFNALISACGESG--------AVARAFDVL 235
Query: 90 DQML--------SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+M S ++P+ +V ++ + D A + K M E+N+ Y
Sbjct: 236 SEMTAEASESKGSKPILPDHVTVGALMKTCIQAGQADRAREVYK-MLQEYNIKGTPEVYT 294
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
AL + A ++ E M +G+ ++ ++AL+ V+ R + ++ ++ R+
Sbjct: 295 IALRSCSLTGDLGFALKIYEDMNKIGVQPDEMFLSALVDVAGHARRADAAFEIMKDARA 353
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S P K +VFD+ML + P + + R+ + G+ F L+ +M
Sbjct: 326 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT---GEEVFELLAKMR- 381
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+ P + TY + C + + + M G+ + ++ G++E
Sbjct: 382 KMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIE 441
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 221
+ Y Y ++++ NE +I+ WFSG++
Sbjct: 442 EAYGYYKEMKEKGMRPNENVEDMIQSWFSGKQ 473
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 7 TNPSKPNKKRKTNPNPETNFLI---NLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNA 63
++PS + + +PE N + + KSK A+ ++E NL+ LH
Sbjct: 111 SSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTV 170
Query: 64 LLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVL 123
L+ + KD ++V+ +M+ + V+PN + + D + A +
Sbjct: 171 LM--------NSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFI 222
Query: 124 IKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183
+ M + VVP + TY+ + +C+ +A V++ M G++L+ +L+
Sbjct: 223 LNEMEVK-GVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFC 281
Query: 184 ETGRVEKVYQYLQKLRSTV 202
+ G++ + + +++ +
Sbjct: 282 KEGKMREAMRMFGEIKDAI 300
>gi|391343648|ref|XP_003746119.1| PREDICTED: mitochondrial ribonuclease P protein 3-like [Metaseiulus
occidentalis]
Length = 199
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 306 EFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL-- 363
FQ+++ +N Y+AI+DG N+ +Y+ + ++ +++ Y+ G L++L
Sbjct: 3 RFQNFIRRNGPYDAIIDGLNV-VYRYE-----LPLRRIHGLLED-YKARGFSRILILLRS 55
Query: 364 HNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAV--KLRCLLVTNDEMR 421
H KR ++ + P + +Y + S DD Y + AA+ RC L++ D R
Sbjct: 56 HAKREFNMMKLPPDVD----------MYCVQNASRDDPYIILAALLSHDRCRLLSFDFYR 105
Query: 422 DHIFELLGSNFF 433
DHI+ L S F
Sbjct: 106 DHIYRLKKSKQF 117
>gi|125537837|gb|EAY84232.1| hypothetical protein OsI_05614 [Oryza sativa Indica Group]
Length = 367
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
D M + P+ + TS+ K D A L++ M + P RTY+ L C
Sbjct: 232 LDAMAAAGHFPDVITYTSLMNGMCVKGDAMGALALLEEMEAK-GCEPNERTYNTLLMGLC 290
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+N + +KA +V + M + LE A ++ GRV Y+
Sbjct: 291 KNKKLDKAVDVYKSMVGAAMKLEAPAYATFVRALCRAGRVPDAYE 335
>gi|341605797|gb|AEK83001.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605799|gb|AEK83002.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605801|gb|AEK83003.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 81/190 (42%), Gaps = 10/190 (5%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K + A+ L E + L + +N L+ C + + GF++ ++M
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS--------EEGFKLIEEMEG 365
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
+ PN + + + K D +++M E +P + TY+ + C+ + +
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKME-ESGCLPDIVTYNTLISWHCKVGKMD 424
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEET-GKII 213
+A+ + + MG GL ++ + +L+ ++++ + L R V+E + G +I
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484
Query: 214 EDWFSGQKVN 223
+F +K +
Sbjct: 485 IGYFKHEKAS 494
>gi|168038568|ref|XP_001771772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676903|gb|EDQ63380.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 614
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 77 SKDSALRHGFRVFDQMLSNNV-IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135
S+ S+L V ++M + V NE + ++ + + +GD A + + M + V+P
Sbjct: 159 SRCSSLSEALEVVNEMKAAGVNAANEGTYLALITVCRRQQEGDRALSIYEAMKDA-GVIP 217
Query: 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG--------- 186
+ TY+ + C + E AY ++ M G+ + AL+ + +TG
Sbjct: 218 SVLTYNTLISCCQQAKRLEDAYRIKAEMEASGVKPDVVTYTALMALVVKTGPYRGRSSPA 277
Query: 187 -RVEKVYQYLQKLR 199
R+EK Q Q+++
Sbjct: 278 QRLEKALQLYQEMQ 291
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 12/172 (6%)
Query: 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164
TS+ ++D AF + ++M+ E N P TY + CE E+A+++++ M
Sbjct: 233 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 292
Query: 165 LMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG----Q 220
G + L+K + G +K + L ++ + N T I+ D +
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 352
Query: 221 KVNGVSCDL---GLVKNAVLKNG--GGWHGLGWIGQGKWVVKRGSVDESGKC 267
+ NGV + GL + N G+ GW+ ++ SV E G C
Sbjct: 353 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL---SVMEKGNC 401
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K+KD+ L+E+ + H FN L D KD L + +M+
Sbjct: 525 KAKDVCF---LFENMVENRCLTTAHTFNCFL--------DALGKDYKLNEANAMLGKMMK 573
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
++P+ + T + + + +++RM + P + TY + C N E
Sbjct: 574 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMK-QAGCSPNVYTYTIIINGLCNNGRVE 632
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+A + M G+S A L+K + GR+++ +Q + +
Sbjct: 633 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 676
>gi|441595336|ref|XP_004087234.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Nomascus
leucogenys]
gi|441595339|ref|XP_004087235.1| PREDICTED: mitochondrial ribonuclease P protein 3 [Nomascus
leucogenys]
Length = 211
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 297 EREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGN 356
++ F+++++ ++ ++DG N+ E F L VV +L +++
Sbjct: 12 KKTTPQELKRFENFIKSCPPFDIVIDGLNVAKMFPKARESQF----LLNVVSQLAKQNLR 67
Query: 357 KWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLL 414
L H R S W ++ ++E ++ + + S DD + LYA + C
Sbjct: 68 LLVLGRKHMLRQCSQWR----KDEMKEVQKQASCFFADNISEDDPFLLYATLHSGNHCRF 123
Query: 415 VTNDEMRDH---IFELLGSNFFLKWKERHQ 441
+T D MRDH + + F KW++ HQ
Sbjct: 124 ITKDLMRDHKACLPDAKTQRLFFKWQQGHQ 153
>gi|341605693|gb|AEK82949.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|341605773|gb|AEK82989.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 11/166 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSALRHGFRVFDQML 93
K KD T A +++E L+ + +N ++ C D + +M
Sbjct: 495 KLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMD---------RAIHMVKEMQ 545
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
P + + A + A + M +P + T++ + E +
Sbjct: 546 KKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS-GCIPTVHTFNALVLGLVEKRQM 604
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
EKA E+ + M L G+S ++ ++ A G K ++Y KLR
Sbjct: 605 EKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLR 650
>gi|387199277|gb|AFJ68892.1| hypothetical protein NGATSA_2016200, partial [Nannochloropsis
gaditana CCMP526]
gi|422294840|gb|EKU22140.1| hypothetical protein NGA_2016200, partial [Nannochloropsis gaditana
CCMP526]
Length = 253
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
R ++FD+M + + + + V + A + D A+VL ++M +V +RTY
Sbjct: 6 RRALKIFDRMREDGIPWDVPTYNVVLKACAEGHQPDMAWVLFQQMQAA-GLVAEVRTYTT 64
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
+ + E E ++A + + M GL + +K G VE Y+++
Sbjct: 65 VMNAWVEAGECQRAIQTFQEMRAAGLQPDVYAWTVGIKACGACGLVETALAYVEE 119
>gi|145341746|ref|XP_001415964.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
gi|144576187|gb|ABO94256.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
Length = 632
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSV--ARLAASKNDGDYAFVLIKRM 127
++A D ++ L VF QM SN ++P + + ++ A + A + + AF + + M
Sbjct: 244 ETALDSMARSGLLAQALEVFVQMKSNGLMPRKVTYNTLLSACVNAPQPRVEAAFEIFEEM 303
Query: 128 NNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE 171
+ NV P TY + C+ + E A++ HM G+ ++
Sbjct: 304 QTKGNVTPDRSTYSLLIDAACKAGKPEMAFDAFSHMRDSGIEIQ 347
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 12/172 (6%)
Query: 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164
TS+ ++D AF + ++M+ E N P TY + CE E+A+++++ M
Sbjct: 210 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 269
Query: 165 LMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG----Q 220
G + L+K + G +K + L ++ + N T I+ D +
Sbjct: 270 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 329
Query: 221 KVNGVSCDL---GLVKNAVLKNG--GGWHGLGWIGQGKWVVKRGSVDESGKC 267
+ NGV + GL + N G+ GW+ ++ SV E G C
Sbjct: 330 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLL---SVMEKGNC 378
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K+KD+ L+E+ + H FN L D KD L + +M+
Sbjct: 502 KAKDVCF---LFENMVENRCLTTAHTFNCFL--------DALGKDYKLNEANAMLGKMMK 550
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
++P+ + T + + + +++RM + P + TY + C N E
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMK-QAGCSPNVYTYTIIINGLCNNGRVE 609
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+A + M G+S A L+K + GR+++ +Q + +
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653
>gi|302141771|emb|CBI18974.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + L++ +RV ++M + PN + + S D D AF + +RM + P
Sbjct: 145 KVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCD--PDA 202
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FCEN + E A +V ++M L + L+ + G K L++
Sbjct: 203 DTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEE 262
Query: 198 L 198
+
Sbjct: 263 M 263
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+V+++ML + + N+ + + AR + AF ++K M + VP TY +
Sbjct: 403 KVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRK-GFVPDASTYTKVITF 461
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C+ +KA+ + + M +G++ + L+ + G +E+ + ++RS
Sbjct: 462 LCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSA 516
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 6/180 (3%)
Query: 20 PNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
PN E N LI+ + KS+D + A L++ + +N + + PSS
Sbjct: 347 PNREIFNSLIH--AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSD 404
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
L + + +ML V+ N+ +V++ AR D AF +I M + VP
Sbjct: 405 ILDLVE--KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGK-GFVPDDS 461
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY + C+ + EKA+ + E M G+ L+ + G +++ ++ ++
Sbjct: 462 TYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521
>gi|297744686|emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 11/172 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C ++ + A Y S+ + FNAL+ C S A+ F V
Sbjct: 1004 IDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSG--------AVDRAFDVL 1055
Query: 90 DQMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+M + + P+ +V ++ + + D A + K M +++N+ Y A+
Sbjct: 1056 AEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYK-MIDQYNIKGTPEVYTIAVSSH 1114
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ + E AY V M G+ ++ ++AL+ V+ G+++ ++ +Q+ R
Sbjct: 1115 SQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEAR 1166
>gi|410110121|gb|AFV61140.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
lupulina]
Length = 257
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 6 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 61
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRST
Sbjct: 62 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRST 119
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
+ R PN T+ +I + + KS +L A+ LY S + + + L+
Sbjct: 858 RSRGCEPNAITHNII-ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI-------- 908
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K ++F++ML PN + + D+A L K+M E +
Sbjct: 909 DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE-GI 967
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168
P L++Y + C C ++A + E + L GL
Sbjct: 968 RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSALRH 84
F + ++S ++ + A++L A+ ++ +NA+L L S+++ D A R
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER- 193
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
VF M+ N V PN + + R S+ D + +++M E + P + TY+ +
Sbjct: 194 ---VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKE-GISPNVVTYNTLI 249
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC 204
C+ + ++A + M + G++ +++ GR+ +V + ++++R
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309
Query: 205 VNEETGKIIEDWF 217
+E T + + F
Sbjct: 310 PDEVTYNTLVNGF 322
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K L + FD+M+ P A+ T++ + + D AF + M +V +
Sbjct: 660 KGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSV 719
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
YD + FC+ L+ + A ++ E M G A+L +G+ EK + LQ+
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 198 L 198
+
Sbjct: 780 M 780
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
DL L + H+ ++ ++ ++ L+ LC K+S + +F++ML
Sbjct: 186 DLDQGFKLKNAMHASGVQPDVYTYSVLINGLC---------KESKMNEANDLFNEMLDKG 236
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
++PN + T++ D A K+M ++ +P L TY+ ++ C+ + ++A
Sbjct: 237 LVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQ-CFLPDLITYNTLIYGLCKKGDLKQA 295
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202
++ + M + GL ++ L+ + + G ++ ++ LR T+
Sbjct: 296 QDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFE----LRETM 337
>gi|145353726|ref|XP_001421156.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
gi|145357180|ref|XP_001422799.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581392|gb|ABO99449.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
CCE9901]
gi|144583043|gb|ABP01158.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 739
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)
Query: 36 SKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN 95
+ D A+ LY S + ++ + AL+ A S + S + ++F + +
Sbjct: 282 ADDDVKAMGLYHDMVSNGINPTVRTYVALIV-----ALSRSKRGSKVTEAEKIFKAAIDD 336
Query: 96 NVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL--FCFCENLE- 152
V PNE T++ N AF RM E +V T+ AL C+ E++E
Sbjct: 337 GVTPNEFLFTALMDAQVKGNRPLSAFETYARM-IEADVNCTTVTFGCALQACCYVEDVEE 395
Query: 153 -AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVR 203
E+AY V M + + L+V + GR+E++ L++++ TVR
Sbjct: 396 SVERAYSVLRDMTERDVQMNDWCSNTFLRVISRAGRIEEM---LEEVKKTVR 444
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 14/198 (7%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSA 72
+ R+ PNP+T +I + + K AI ++ S H L+ FN +L LC
Sbjct: 128 RTRRLGPNPKTFAIITERYVSAGKP-DRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKR 186
Query: 73 TDPSS-----------KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
+ + + L+ + F QM + + T+V + A
Sbjct: 187 VEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQ 246
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
+ M E V+P + TY+ + C+ E A V E M G +++
Sbjct: 247 RVFNEMIGE-GVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRG 305
Query: 182 SAETGRVEKVYQYLQKLR 199
GR+EK +++ +++
Sbjct: 306 LCHVGRMEKAMEFMARMK 323
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 9/164 (5%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV 97
D A S++E L+ +N L+ + K + R+F++M +
Sbjct: 478 DFANAFSIFEDMIKSGLQPDRAIYNLLV--------EAFCKMGNMDRAIRIFERMKKERM 529
Query: 98 IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAY 157
P+ + + A D A + M P + TY+ + + E+A
Sbjct: 530 QPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRS-GCAPTVMTYNALIHGLIRKHQVERAV 588
Query: 158 EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
V + M + G++ + +++ A +G + K ++Y K++ +
Sbjct: 589 SVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 632
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDG--DYAFVLIKRMNNEFNVVPRLRTY 140
R F++ML V+P++ + T V L+A N G D ++ RM+ EF +VP + Y
Sbjct: 210 REAIGAFEEMLKMGVLPDDLTFTGV--LSACSNCGLVDKGMIIFARMSKEFGIVPNIHHY 267
Query: 141 DPALFCFCENLEAEKAYEV 159
+ + +AY++
Sbjct: 268 GCMVDLLGRAGQLHQAYQL 286
>gi|115443847|ref|NP_001045703.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|41052618|dbj|BAD08127.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|41053255|dbj|BAD07623.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535234|dbj|BAF07617.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|125580592|gb|EAZ21523.1| hypothetical protein OsJ_05149 [Oryza sativa Japonica Group]
gi|215766292|dbj|BAG98520.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
D M + P+ + TS+ K D A L++ M + P RTY+ L C
Sbjct: 232 LDAMAAAGHFPDVITYTSLMNGMCVKGDAMGALALLEEMEAK-GCEPNERTYNTLLMGLC 290
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+N + +KA +V + M + LE A ++ GR+ Y+
Sbjct: 291 KNKKLDKAVDVYKSMVGAAMKLEAPAYATFVRALCRAGRIPDAYE 335
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 63 ALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFV 122
AL L +S + K + +++F ++ S+ V P+ S R N+ F
Sbjct: 249 ALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFS 308
Query: 123 LIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182
++ RM +++VP + TY+ + C+N + E AY++ M G+S + +L
Sbjct: 309 VLDRMKR-YDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYH 367
Query: 183 AETGRVEKVYQYL 195
E V + + +
Sbjct: 368 CEHSEVNRATKLI 380
>gi|449458656|ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cucumis sativus]
Length = 1108
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C ++ + A +Y S+N++ FNAL+ C S A+ F V
Sbjct: 562 IDGCARAAQVAKAFGVYGIMRSKNVKPDRVVFNALITACGQSG--------AVDRAFDVL 613
Query: 90 DQMLS--NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+M + + + P+ ++ ++ + A+ D A + K M +++ + Y A+ C
Sbjct: 614 AEMGAELHPIEPDHITIGALMKACANAGQVDRAREVYK-MIHDYKIKGTPEVYTIAVNCC 672
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
++ + + A + + M G+ ++ ++AL+ V+ G+++ ++ L + ++
Sbjct: 673 SQSCDWDFASNIYQDMTRKGVQPDEIFLSALIDVAGHAGKLDAAFEVLGEAKT 725
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ +C+ +K+ A++LYE S LRL++ NAL+ SD L+ +
Sbjct: 739 MGACSNAKNWQKALALYEDLKSMKLRLTVSTVNALITALSDG--------EQLQMAMDIL 790
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140
+M + PN + + + + ND + A +L+ + E +VP L Y
Sbjct: 791 TEMKELGLSPNNITYSILTAASDRNNDLEIALMLLSQA-KEDGIVPTLTMY 840
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
L+ K+ L TA++ +++ +++F LL +C D+A L+ G +
Sbjct: 119 LKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNAD--------LKRGKEIH 170
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
Q+++N+ N ++T V + A D A+ + RM L +++ + F +
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER-----DLVSWNTIIAGFSQ 225
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG 186
N A+KA E+ M G + + +L +A+ G
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
>gi|403373087|gb|EJY86457.1| hypothetical protein OXYTRI_13642 [Oxytricha trifallax]
Length = 747
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSN 431
P + +L+ ++KG + TP DD Y + A K +VTND+ RD+I + + S+
Sbjct: 644 PDNISLLHALSDKGFIIKTPPQDYDDSYCIKYAKKFNAFIVTNDKFRDYITKQVSSD 700
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
N LIN + + + AI L ++ + +N L+ CS ++S L
Sbjct: 236 NTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACS--------RESNLEE 287
Query: 85 GFRVFDQMLSNNVIPN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140
+V++ M+++ P+ A ++ R S+ G L K + ++ +P TY
Sbjct: 288 AVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGR----LFKDLESK-GFLPDAVTY 342
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
+ L+ F +K E+ E M MG ++ ++ + + G+ + +Q ++
Sbjct: 343 NSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKL 402
Query: 201 TVRCVNEETGKIIED 215
+ R + T ++ D
Sbjct: 403 SGRSPDAVTYTVLID 417
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 16 RKTNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSAT 73
R PN T N LIN K + A L ES L+ + F++++ LC T
Sbjct: 458 RGVVPNLVTFNTLINGH--CKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRT 515
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
+ F +M+ + PN + R + D + L++RM E +
Sbjct: 516 E---------EALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKE-GI 565
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
P +Y+ + FC + EKA ++ + M GL+ + +A ++ +E+GR+E+
Sbjct: 566 SPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEE 622
>gi|341605725|gb|AEK82965.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ M +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHXMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|293333874|ref|NP_001167998.1| hypothetical protein [Zea mays]
gi|223945411|gb|ACN26789.1| unknown [Zea mays]
gi|223946291|gb|ACN27229.1| unknown [Zea mays]
gi|414584797|tpg|DAA35368.1| TPA: hypothetical protein ZEAMMB73_806553 [Zea mays]
Length = 532
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 6/140 (4%)
Query: 68 CSDSATDPSSKDSALRHGFR------VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAF 121
C+ +A +S SAL R +FD ML+N V P+ A+ + + + +S A
Sbjct: 78 CAPTAASYTSAMSALAKAGRPADAASLFDDMLANGVAPDRAAFSLLLHVYSSHLHLPAAA 137
Query: 122 VLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181
+ + P Y +F FC A+++ + M + L A +LK
Sbjct: 138 HSVLLWMTGLGLPPTPIDYTDLIFSFCRAGRLHNAFQLLDEMRALNYPLTPHAFAPILKA 197
Query: 182 SAETGRVEKVYQYLQKLRST 201
+ ++ + +RS+
Sbjct: 198 VCDNADIQAADALISSMRSS 217
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 11/166 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSALRHGFRVFDQML 93
K KD T A +++E L+ + +N ++ C D + +M
Sbjct: 516 KLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMD---------RAIHMVKEMQ 566
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
P + + A + A + M +P + T++ + E +
Sbjct: 567 KERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS-GCIPTVHTFNALVLGLVEKRKM 625
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
EKA E+ + M L G+S ++ ++ A G K ++Y K+R
Sbjct: 626 EKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMR 671
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ LR VF++MLS V P+ + T + A+K D AF+ +M E +V +
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM-LEKSVPANV 600
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ-YLQ 196
TY+ + C ++AY+ + M G+ + L+ S G E+ + Y +
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660
Query: 197 KLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNA 235
L ++ + +++ +V+ V C L++N
Sbjct: 661 MLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNV 699
>gi|403363909|gb|EJY81705.1| hypothetical protein OXYTRI_20780 [Oxytricha trifallax]
Length = 747
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 375 PSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSN 431
P + +L+ ++KG + TP DD Y + A K +VTND+ RD+I + + S+
Sbjct: 644 PDNISLLHALSDKGFIIKTPPQDYDDSYCIKYAKKFNAFIVTNDKFRDYITKQVSSD 700
>gi|389613445|dbj|BAM20071.1| similar to CG4611, partial [Papilio xuthus]
Length = 235
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALR 83
TN+ + +++ + DL A + + S+ +++ +H FN LL+ C + K+ LR
Sbjct: 22 TNYNVMIKAFGRCGDLPMAFKIVDEMISKKIKIRVHTFNHLLHACIN------DKEHGLR 75
Query: 84 HGFRVFDQMLSNNVIPN 100
H V+ +MLS PN
Sbjct: 76 HALLVWRKMLSMREKPN 92
>gi|341606955|gb|AEK83580.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 206
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|357473771|ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 11/172 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C ++ + A Y S+N++ FNAL+ C+ S A+ F V
Sbjct: 627 IDGCARAGQVAKAFGAYGIMRSKNVKADRVVFNALIAACAQSG--------AMARAFDVI 678
Query: 90 DQMLS--NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+M + ++P+ + ++ + A + A + K M ++N+ Y A+
Sbjct: 679 AEMEAEIQPIVPDHVTFGTLMKACAKAGQVERAREVYK-MIQQYNIKGSSEVYTIAINSC 737
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ + E A V + M G+ ++ ++AL+ V+ ++E + LQ+ R
Sbjct: 738 SQTGDWEFARSVYDDMTQKGVLPDEMFMSALIDVAGHAKKLEAAFDILQQAR 789
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 56 LSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKN 115
+ + FN +Y C + K+ + + F +ML+ V P+ ++ + + +
Sbjct: 124 MGIRGFNPSVYTC-NMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEG 182
Query: 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEI 175
A L+K+M E VP + TY+ L +C+ + A E+ + MG G+ +
Sbjct: 183 KLKKAGYLLKKME-ESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTY 241
Query: 176 AALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 217
L+ + R K Y L+K+R + NE T I + F
Sbjct: 242 NMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGF 283
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIK-----RMNNEFNVVPRLRTYDP 142
VF++M+ N +P+ + + ++ KN +L+K RM E+ + P + TY+
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKN------LLVKALEVYRMMGEYGIRPTVTTYNT 242
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
L FC+ E ++A ++ M G + L+ ++ G +++ +Q++
Sbjct: 243 MLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 18/195 (9%)
Query: 42 AISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++L+ +N+ ++ + L++ C +K ++ M +IP+
Sbjct: 408 VVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAK--------KILLHMSEKGMIPSS 459
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
+ T V + A V + MN E P + TY+ ++ F ++ +
Sbjct: 460 KAYTGVIEAYGQAAMYEEALVTLNTMN-EMGSKPTIETYNTLIYMFARGGLYKETEAILL 518
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 221
MG G++ E+ +++ + G+ E+ + V E +++ D + +
Sbjct: 519 KMGDFGVARERDSFNGVIEGFRQGGQFEEAIK---------AYVEMEKSRLVPDERTLEA 569
Query: 222 VNGVSCDLGLVKNAV 236
V V C GLV +V
Sbjct: 570 VLSVYCIAGLVDESV 584
>gi|449443185|ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
PN T FL + +CT +T SL H++ LR S H F A+ D D
Sbjct: 312 PNKAT-FLSVISACTHMGFRSTGRSL----HARALRASFHEFVAIGTALMDMYAKAGDAD 366
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+AL ++F ++ +V+ A T ++ LA + G A + +RM E V P T
Sbjct: 367 TAL----KIFSKLRKKDVM---AWTTMISGLAI-QGKGKEALNVFRRMEEEAEVAPDQIT 418
Query: 140 YDPALF-CFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
Y L+ C L E + + G+ + ++ + + G ++ + L K+
Sbjct: 419 YIAVLWACSHLGLVEEGQKQFTSMTEVYGIEPTMEHYGCMIDLLSRAGHSKEAEELLMKM 478
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC 146
+V+++ML+ + + N+ + + +R + AF ++K M + VP TY +
Sbjct: 403 KVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK-GFVPDTSTYTKVITF 461
Query: 147 FCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
C+ + EK++ + + M G++ + L+ + G +E+ + ++RS
Sbjct: 462 LCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSV 516
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 42 AISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
A + ES ++++ + H + AL+ D K + H +F +ML+ +PN
Sbjct: 484 AHQILESLKEKHVKANEHAYTALI--------DGYCKAGKIEHAASLFKRMLAEECLPN- 534
Query: 102 ASVTSVARLAASKNDGDY--AFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
S+T + + +G A +L++ M +F+V P L TY+ + + + ++A E+
Sbjct: 535 -SITFNVMIDGLRKEGKVQDAMLLVEDMA-KFDVKPTLHTYNILVEEVLKEYDFDRANEI 592
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG 219
+ G A +K GR+E+ + + K++ NE G +++ +
Sbjct: 593 LNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIK------NE--GVLLDSFIYN 644
Query: 220 QKVNGVSCDLGLVKNA 235
+N C +GL+ +A
Sbjct: 645 LLINAYGC-MGLLDSA 659
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 78/190 (41%), Gaps = 14/190 (7%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
NPNP ++ + +K + A+SL + ++ +NA++ + SK
Sbjct: 510 NPNP-VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI--------NGLSK 560
Query: 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138
++ ++ D+M+ ++PN + T++ +AF + M +P L
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR-KCLPNLY 619
Query: 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
TY ++ C+ +A++A E M +G + L+ GR + Q ++ +
Sbjct: 620 TYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 199 RSTVRCVNEE 208
+ C + E
Sbjct: 676 KERGFCPDRE 685
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 11 KPNKKRKTNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCS 69
K RK PN T N LI++ K L A LY+ ++ + + +N+L+
Sbjct: 264 KDMTSRKIIPNVITFNVLIDVF--VKEGKLQEANELYKEMITKGISPNTITYNSLM---- 317
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
D + L + D M+ NN P+ + TS+ + D L ++++
Sbjct: 318 ----DGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK 373
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+V TY + FC++ + E A E+ + M +G+ + LL + G++E
Sbjct: 374 R-GLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE 432
Query: 190 K---VYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV 222
K +++ LQK + + V IIE G KV
Sbjct: 433 KALEIFEDLQKSKMNLDIVMYTI--IIEGMCKGGKV 466
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 82 LRHGFR-----VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
+R GF V D M S ++PN + T++ D D A + +M E VP
Sbjct: 374 VRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMM-ELGCVPN 432
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
+ TY+ L + +E+ ++ HM L G S +L + + G + V Q +
Sbjct: 433 VATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFR 492
Query: 197 KLR 199
+++
Sbjct: 493 EMK 495
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 48/117 (41%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+ + +R+ D+M + V PN + + A+ + +RM+ E P L TYD
Sbjct: 381 MAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYD 440
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ FC + A ++ + M G+ + L+ ++E Y Q++
Sbjct: 441 IMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEM 497
>gi|341605737|gb|AEK82971.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605739|gb|AEK82972.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605741|gb|AEK82973.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRXNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 48/117 (41%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
+ + +R+ D+M + V PN + + A+ + +RM+ E P L TYD
Sbjct: 381 MAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYD 440
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ FC + A ++ + M G+ + L+ ++E Y Q++
Sbjct: 441 IMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEM 497
>gi|341605731|gb|AEK82968.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605733|gb|AEK82969.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
gi|341605735|gb|AEK82970.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 112 TCRXNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
+ S H F++ D+M + PN + + + A+ + +RM + P+L
Sbjct: 387 RASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMD-GCEPQL 445
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FC N + A V + MG G+ +AL+ R+E+ Y Q+
Sbjct: 446 NTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQE 505
Query: 198 L 198
+
Sbjct: 506 M 506
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR 87
I L C + DL L+ N +++++L+Y + L+
Sbjct: 393 IVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIY--------AYCRHRQLKEALE 444
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VF+ M+S+ + PN + T + +++ AF+ + ++ +F VVP L TY +
Sbjct: 445 VFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV-RQFGVVPSLCTYRVIIHGL 503
Query: 148 CE 149
C+
Sbjct: 504 CK 505
>gi|221060566|ref|XP_002260928.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193811002|emb|CAQ42900.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 633
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 67 LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKR 126
L ++A K L+ +F+ M N+ P+ S + RL A+ + GD+A +L
Sbjct: 159 LAFNAAMSAVEKKGCLKSMLELFEVMKKKNIKPDLVSYKLLLRLCANYHLGDHAEILFDE 218
Query: 127 MNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
M + P Y + CF + + KA E E +
Sbjct: 219 MVETDKLTPTYEIYALMINCFAKVGDGHKAVEFLEKL 255
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D KD L +VF++M S + P + S+ ++ + A VL+ M + N+
Sbjct: 311 DGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS-NL 369
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
P + TY+ + +C+ E+A E+ +++G GL+ LL + G++E+ +
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAF- 428
Query: 194 YLQKL 198
LQK+
Sbjct: 429 LLQKV 433
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K+KD+ L+E+ + H FN L D KD L + +M+
Sbjct: 459 KAKDVCF---LFENMVENRCLTTAHTFNCFL--------DALGKDYKLNEANAMLGKMMK 507
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
++P+ + T + + + +++RM + P + TY + C N E
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMK-QAGCSPNVYTYTIIINGLCNNGRVE 566
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+A + M G+S A L+K + GR+++ +Q + +
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 610
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
L+ K+ L TA++ +++ +++F LL +C D+A L+ G +
Sbjct: 119 LKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNAD--------LKRGKEIH 170
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
Q+++N+ N ++T V + A D A+ + RM L +++ + F +
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER-----DLVSWNTIIAGFSQ 225
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG 186
N A+KA E+ M G + + +L +A+ G
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142
+ F + D+ML++ + P + + TS+ + + KN A L K++ +E V+P ++
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDAIMFNA 471
Query: 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ C N + A+E+ + M M + ++ +++ G+VE+ + +++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 16 RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDP 75
R+ P+ T + I + S KS +L A+ + S + R + + L+ D
Sbjct: 852 RRCKPDAIT-YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI--------DG 902
Query: 76 SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135
+K L R+F++M PN A + D + A L KRM NE + P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRP 961
Query: 136 RLRTYDPALFCFC 148
L++Y + C C
Sbjct: 962 DLKSYTILVDCLC 974
>gi|341606837|gb|AEK83521.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606869|gb|AEK83537.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606977|gb|AEK83591.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606979|gb|AEK83592.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606981|gb|AEK83593.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606983|gb|AEK83594.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606985|gb|AEK83595.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606987|gb|AEK83596.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606989|gb|AEK83597.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606991|gb|AEK83598.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606993|gb|AEK83599.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606995|gb|AEK83600.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606997|gb|AEK83601.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606999|gb|AEK83602.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607001|gb|AEK83603.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607003|gb|AEK83604.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607005|gb|AEK83605.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607007|gb|AEK83606.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607009|gb|AEK83607.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607011|gb|AEK83608.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607013|gb|AEK83609.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341607015|gb|AEK83610.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 207
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|341606831|gb|AEK83518.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606833|gb|AEK83519.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606835|gb|AEK83520.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606839|gb|AEK83522.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606841|gb|AEK83523.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606843|gb|AEK83524.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606845|gb|AEK83525.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606847|gb|AEK83526.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606849|gb|AEK83527.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606851|gb|AEK83528.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606853|gb|AEK83529.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606855|gb|AEK83530.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606857|gb|AEK83531.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606859|gb|AEK83532.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606861|gb|AEK83533.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606863|gb|AEK83534.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606865|gb|AEK83535.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606867|gb|AEK83536.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606871|gb|AEK83538.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606873|gb|AEK83539.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606875|gb|AEK83540.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606877|gb|AEK83541.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606879|gb|AEK83542.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606881|gb|AEK83543.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606883|gb|AEK83544.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606885|gb|AEK83545.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606887|gb|AEK83546.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606889|gb|AEK83547.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606891|gb|AEK83548.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606893|gb|AEK83549.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606895|gb|AEK83550.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606897|gb|AEK83551.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606899|gb|AEK83552.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606901|gb|AEK83553.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606903|gb|AEK83554.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606905|gb|AEK83555.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606907|gb|AEK83556.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606909|gb|AEK83557.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606911|gb|AEK83558.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606913|gb|AEK83559.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606915|gb|AEK83560.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606917|gb|AEK83561.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606919|gb|AEK83562.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606921|gb|AEK83563.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606923|gb|AEK83564.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606925|gb|AEK83565.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606927|gb|AEK83566.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606929|gb|AEK83567.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606931|gb|AEK83568.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606933|gb|AEK83569.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606935|gb|AEK83570.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606937|gb|AEK83571.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606939|gb|AEK83572.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606941|gb|AEK83573.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606943|gb|AEK83574.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606945|gb|AEK83575.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606947|gb|AEK83576.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606949|gb|AEK83577.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606951|gb|AEK83578.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606953|gb|AEK83579.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606957|gb|AEK83581.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606959|gb|AEK83582.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606961|gb|AEK83583.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606963|gb|AEK83584.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606965|gb|AEK83585.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606967|gb|AEK83586.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606969|gb|AEK83587.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606971|gb|AEK83588.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606973|gb|AEK83589.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
gi|341606975|gb|AEK83590.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+P + T++ + E + EKA E+ + M L G+S + ++ A G K ++
Sbjct: 580 IPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFE 639
Query: 194 YLQKLRS 200
Y KL++
Sbjct: 640 YFTKLKT 646
>gi|451848184|gb|EMD61490.1| hypothetical protein COCSADRAFT_39215 [Cochliobolus sativus ND90Pr]
Length = 818
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 2 SNTTSTNPSKPNKKRKT---------NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQ 52
S+TT T P P T + NP F L S + + L + ++ +S Q
Sbjct: 571 SSTTGTTPFPPAALPTTAQALSRLLISINPSHVFNAALPSTSAIRPLISQLTRTDSTTWQ 630
Query: 53 NLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR--VFDQMLSNNVIPNEASVTSVARL 110
LH F ALL L + ++ D S++D +R F V D +LS N + AS V L
Sbjct: 631 -----LHAFEALLALTNLASLDRSTQDHIIRQSFDTVVDDLLLSPNTLVRRASTELVCNL 685
Query: 111 AAS 113
AS
Sbjct: 686 MAS 688
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 11/165 (6%)
Query: 37 KDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSN 95
KD A +++E L+ + +N ++ C D R +M
Sbjct: 513 KDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMD---------RAIRTVKEMQKE 563
Query: 96 NVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK 155
P + + A D A + M +P + T++ + E + EK
Sbjct: 564 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWS-GCIPTVHTFNALILGLVEKCQMEK 622
Query: 156 AYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
A E+ + M L G+S + ++ A G K ++Y KL++
Sbjct: 623 AVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKT 667
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 42 AISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
AI +++S S L +L +NA++ C + + +FD MLSN V P+
Sbjct: 244 AIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVE-------FKKVVEIFDGMLSNGVQPDR 296
Query: 102 ASVTSVA-------------RLAASKNDG----------------------DYAFVLIKR 126
+ S+ RL ++ D D AF ++
Sbjct: 297 ITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSE 356
Query: 127 MNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG 186
M + N++P + TY + + + + A + M +G+ L++ LL V A+ G
Sbjct: 357 MPTK-NILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLG 415
Query: 187 RVEK 190
R E+
Sbjct: 416 RFEQ 419
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
VF +M +N+ P+ + + + S N D AF + K+M + ++P TY +
Sbjct: 723 VFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFFVFKKMKDNC-LIPNSVTYGCLIDAC 781
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK---VYQYLQ 196
+N + E+A EV E M G+ L L+K A++ ++++ VYQ ++
Sbjct: 782 VKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIMK 833
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L + FD+M+ P A+ T++ + + D AF + M +V + YD
Sbjct: 664 LEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYD 723
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ FC+ L+ + A ++ E M G A+L +G+ EK + LQ++
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + L++ +RV ++M + PN + + S D D AF + +RM + P
Sbjct: 297 KVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCD--PDA 354
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FCEN + E A +V ++M L + L+ + G K L++
Sbjct: 355 DTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEE 414
Query: 198 L 198
+
Sbjct: 415 M 415
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 16 RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDP 75
R+ P+ T + I + S KS +L A+ + S + R + + L+ D
Sbjct: 852 RRCKPDAIT-YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI--------DG 902
Query: 76 SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135
+K L R+F++M PN A + D + A L KRM NE + P
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRP 961
Query: 136 RLRTYDPALFCFC 148
L++Y + C C
Sbjct: 962 DLKSYTILVDCLC 974
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNN------EFNVVP----RLRTYDPALFCFCENLEA 153
+T L S D Y LI +++ F+ VP L+ Y L C+ E
Sbjct: 108 MTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERV 167
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213
EKA E+ E+M MG++ A++ + ++ G+VE+V+ + + E G I+
Sbjct: 168 EKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSM---------EEGGIV 217
Query: 214 EDWFSGQKVNGVSCDL-------GLVKNAVLKNGGGWHGLGWIGQ 251
D F+ + D+ +++ A N WH +G+
Sbjct: 218 PDIFTIDNLVSAYADVEDVEAIEKVLEKASCNNLMSWHSFAIVGK 262
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 50/110 (45%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+ +++ + +IP+ S +V + D D A+ L +RM ++ + + TY+ + F
Sbjct: 525 LLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAF 584
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
E L+ + A ++ MG G + ++ + G V Y +L K
Sbjct: 585 SEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLK 634
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRST
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRST 244
>gi|399107202|gb|AFP20365.1| At1g03560-like protein, partial [Capsella grandiflora]
Length = 212
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 41 TAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+ ++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ P
Sbjct: 2 SCVALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKP 52
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
N A T + A + A L+ RM +E + TY + C+N E+A +
Sbjct: 53 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKXDVVTYSVVVNGLCKNGRVEEALDY 111
Query: 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ GL++ ++L+ + GR+++ + +++
Sbjct: 112 FQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 150
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 56 LSLHHFNALLYLCSD--SATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAAS 113
+ L+ FN +Y C+ + S +D ++ + +ML + P+ A+ + + +
Sbjct: 149 MGLYGFNPSVYTCNAILGSIVKSCEDVSV---WSFLKEMLKRKICPDVATFNILINVLCA 205
Query: 114 KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ 173
+ + L+++M P + TY+ L +C+ + A E+ +HM L G++ +
Sbjct: 206 EGSFKKSSYLMQKMEKS-GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVC 264
Query: 174 EIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ 220
L+ + R K Y L+ +R + NE T + + FS +
Sbjct: 265 TYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNE 311
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/118 (19%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
++ F V ++M+++ + P + +++ R A D A +L++ M + +VP + ++
Sbjct: 910 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSML-KMKLVPTIASFT 968
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ FC+N +A E+ M GL L+ L+ G + ++ ++++
Sbjct: 969 TLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMK 1026
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 9/174 (5%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
+F + L + K L TA+SL++ H + + +N L+ L H
Sbjct: 205 HFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILI--------RAHCHSDKLSH 256
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
+ +F++M IP+ + + + + K+ A ++ M N+ VP TY+ L
Sbjct: 257 AYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNK-GYVPDALTYNTLL 315
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C + +AY + M +MG + + ++ GR Q L+ +
Sbjct: 316 NSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDM 369
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G+++K QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSS 283
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ LR VF++MLS V P+ + T + A+K D AF+ +M E +V +
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKM-LEKSVPANV 600
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ-YLQ 196
TY+ + C ++AY+ + M G+ + L+ S G E+ + Y +
Sbjct: 601 ITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660
Query: 197 KLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNA 235
L ++ + +++ +V+ V C L++N
Sbjct: 661 MLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNV 699
>gi|390566103|ref|ZP_10246615.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390170651|emb|CCF85958.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 146
Score = 39.7 bits (91), Expect = 3.2, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 320 IVDGANIGLYQQNFTEGGFSVPQLDAV--VKKLYERSGNKWPLVILHNKRLRSLWENPSH 377
IVDG+N+ + +G S P+L + V+K E+ G + VI+ + L + + PS
Sbjct: 12 IVDGSNVAY--EGVPKG--SKPELSNILAVRKALEKRG--YDPVIIVDAALHHVVDQPSQ 65
Query: 378 RNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDH 423
+E +K + P G++ D++ L A ++ +V+NDE R +
Sbjct: 66 ---IEHLIDKDAILQAPAGTDADYFILETAGRMHAQVVSNDEYRPY 108
>gi|221054590|ref|XP_002258434.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808503|emb|CAQ39206.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1051
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
Y ++DGANIG +QN G FS Q++ ++K++ ++ + PL+IL
Sbjct: 503 YTCLLDGANIGYNKQNVENGRFSFLQIE-ILKEIIKKRNKETPLIIL 548
>gi|341606825|gb|AEK83515.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 206
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 46 YESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104
Y+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 YQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAIY 51
Query: 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 TVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCR 110
Query: 165 LMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 111 FNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 144
>gi|389583000|dbj|GAB65736.1| hypothetical protein PCYB_072380 [Plasmodium cynomolgi strain B]
Length = 1055
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 317 YEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVIL 363
Y ++DGANIG +QN G FS Q++ ++K++ ++ + PL+IL
Sbjct: 531 YTCLLDGANIGYNKQNVENGRFSFLQIE-ILKEIIKKRNKETPLIIL 576
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 15 KRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSAT 73
+R+ P+ T + + L++ KS A+ + + ++ ++ +N ++ +C +
Sbjct: 165 RRECQPSVVT-YTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVAR-LAASKNDGDYAFVLIKRMNNEFN 132
D + + + +++ S P+ S T+V + L A+K D + + + N N
Sbjct: 224 DDARQ---------ILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN--N 272
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
VP T+D + FC E+A EV + M G + ++ + GRV+ +
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332
Query: 193 QYLQKLRS 200
++L + S
Sbjct: 333 EFLNNMGS 340
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 12/169 (7%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+F +M+ NN +PNE + + R + A ++ RM+ E + +
Sbjct: 264 LFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS-EHGCTANTTLCNIVINSI 322
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR-------- 199
C+ + A+E +MG G S + +LK GR E + L ++
Sbjct: 323 CKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382
Query: 200 ---STVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHG 245
+T C+ + G I + +++ C +G+V L NG G
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQG 431
>gi|451999179|gb|EMD91642.1| hypothetical protein COCHEDRAFT_1175781 [Cochliobolus
heterostrophus C5]
Length = 818
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 2 SNTTSTNPSKPNKKRKT---------NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQ 52
S+TT T P P T + NP F L S + + L + ++ ES Q
Sbjct: 571 SSTTGTTPFPPAALPTTAQALSRLLISINPSHVFNAALPSTSAIRPLISQLTRTESTTWQ 630
Query: 53 NLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFR--VFDQMLSNNVIPNEASVTSVARL 110
LH F ALL L + ++ D +++D +R F V D +LS N + AS V L
Sbjct: 631 -----LHAFEALLALTNLASLDRNTQDHIIRQSFDTVVDDLLLSPNTLVRRASTELVCNL 685
Query: 111 AAS 113
AS
Sbjct: 686 MAS 688
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 27/174 (15%)
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN------EFNVVP----RLRTYDPAL 144
N IP +T L S D Y LI +++ F+ VP L+ Y L
Sbjct: 61 NPGIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLL 120
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC 204
C+ E EKA E+ E+M MG++ A++ + ++ G+VE+V + +
Sbjct: 121 RCYAEAERVEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAM------ 173
Query: 205 VNEETGKIIEDWFSGQKVNGVSCDL-------GLVKNAVLKNGGGWHGLGWIGQ 251
E G I+ D F+ + D+ +++ A N WH +G+
Sbjct: 174 ---EEGGIVPDIFTIDNLVSAYADVEDVEAIEKVLEKASCNNLMSWHSFAIVGK 224
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
N LIN + + + AI L ++ + +N L+ CS ++S L
Sbjct: 261 NTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACS--------RESNLEE 312
Query: 85 GFRVFDQMLSNNVIPN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140
+V++ M+++ P+ A ++ R S+ G L K + ++ +P TY
Sbjct: 313 AVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGR----LFKDLESK-GFLPDAVTY 367
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
+ L+ F +K E+ E M MG ++ ++ + + G+ + +Q ++
Sbjct: 368 NSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKL 427
Query: 201 TVRCVNEETGKIIED 215
+ R + T ++ D
Sbjct: 428 SGRSPDAVTYTVLID 442
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 12/173 (6%)
Query: 19 NPNPE-TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPS 76
N P+ ++ +Q+C +D T +SLY + L + H ++ ++ LC
Sbjct: 285 NVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLC-------- 336
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
K + VF+ M N A T++ + + A L +RM NE P
Sbjct: 337 -KQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNE-GFEPD 394
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
TY + C++ + E+ + G+++ A+L+ + GR+E
Sbjct: 395 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 447
>gi|359474892|ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 11/172 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ C ++ + A Y S+ + FNAL+ C S A+ F V
Sbjct: 569 IDGCGRAGQVAKAFGAYGIMRSKKVEPDRVVFNALITACGQSG--------AVDRAFDVL 620
Query: 90 DQMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+M + + P+ +V ++ + + D A + K M +++N+ Y A+
Sbjct: 621 AEMRAETQPIDPDHITVGALIKACTNAGQVDRAREVYK-MIDQYNIKGTPEVYTIAVSSH 679
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ + E AY V M G+ ++ ++AL+ V+ G+++ ++ +Q+ R
Sbjct: 680 SQIGDWEFAYSVYTDMTRKGVVPDEMFLSALIDVAGHAGKLDAAFEVIQEAR 731
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNTM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 9/162 (5%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV 97
D T A ++E + L+ L A+ L ++ + D A+R + ++M +
Sbjct: 502 DFTNAFRIFE----EMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIR----ILEKMQKERM 553
Query: 98 IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAY 157
P+ + + A D A ++ M P + TY+ + + E+A
Sbjct: 554 QPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS-GCAPTVMTYNALIHGLIRKNQVERAV 612
Query: 158 EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
V M + G++ + +++ A TG + K ++Y K++
Sbjct: 613 SVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIK 654
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 34/149 (22%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE-------------- 130
F +F+ ++ + + P+ ++ R D A ++K M E
Sbjct: 535 AFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIH 594
Query: 131 --------------FNV------VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170
F++ +P + T++ + E + EKA E+ + M L G+S
Sbjct: 595 GFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSP 654
Query: 171 EQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ ++ A G K ++Y KLR
Sbjct: 655 NEHTYTTIMHGYAALGDTGKAFEYFTKLR 683
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 54/126 (42%)
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
T+ K + + D++L+ + P+ S ++ A+ D A+ L +RM ++
Sbjct: 538 TESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYK 597
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
V TY+ + F E L+ ++ MG G + + ++ TG + Y
Sbjct: 598 VSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGY 657
Query: 193 QYLQKL 198
++L ++
Sbjct: 658 KFLLEM 663
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 81/195 (41%), Gaps = 17/195 (8%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
N LIN + + + AI L ++ + +N L+ CS ++S L
Sbjct: 293 NTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACS--------RESNLEE 344
Query: 85 GFRVFDQMLSNNVIPN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140
+V++ M+++ P+ A ++ R S+ G L K + ++ +P TY
Sbjct: 345 AVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGR----LFKDLESK-GFLPDAVTY 399
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
+ L+ F +K E+ E M MG ++ ++ + + G+ + +Q ++
Sbjct: 400 NSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKL 459
Query: 201 TVRCVNEETGKIIED 215
+ R + T ++ D
Sbjct: 460 SGRSPDAVTYTVLID 474
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K ++ + +F++M+ +PN + V R + D A I+RM + P +
Sbjct: 334 KKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTD-GCEPNV 392
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMG 164
+TY+ A+ FC+ + EK + E MG
Sbjct: 393 QTYNVAIRYFCDAGDVEKGLSMFEKMG 419
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94
K K + A+ L + H + + ++ +++L+ D K + + ++ D+M
Sbjct: 259 KIKMMDEAMELLKEMHHKQIIPNVVTYSSLI--------DGLCKSGKISYALKLVDEMHD 310
Query: 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154
PN + +S+ + D A L+ +M N+ + P + TY + C++ + E
Sbjct: 311 RGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ-GIQPNMYTYTILIKGLCQSGKLE 369
Query: 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213
A +V E + + G +L +++ + G ++ L K+ N +T +II
Sbjct: 370 DARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEII 428
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + +++ +RV +M S V PN S + R + + D AF + ++M P
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE--PDA 411
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FCE E E A +V ++M G+ + L+ E +K L++
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 198 L 198
+
Sbjct: 472 M 472
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDG--DYAFVLIKRMNNEFNVVPRLRTYDP 142
F +F +M N V P++ +T V L+A + G D + K M ++N+ P+L Y
Sbjct: 388 AFDLFSRMRGNRVEPDD--ITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYG- 444
Query: 143 ALFCFCENLEAEKAY-EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
C + L + E EE + M + + +LLK + G +E + QKL
Sbjct: 445 ---CMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKL 498
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 27/189 (14%)
Query: 15 KRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSAT 73
K+ PN T F + ++ DL A ++E S ++ + L+ Y C
Sbjct: 580 KKTCKPNVVT-FTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFC----- 633
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
K+ L F+QML N IPN+A+ + + N+G + KR N++ N+
Sbjct: 634 ----KEGKLTKACFFFEQMLINKCIPNDATFNYLVN-GLTNNNG--IAISSKRSNSQPNL 686
Query: 134 VP-------------RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180
R+ Y+ L C C++ + A ++ + M G + ALL
Sbjct: 687 TLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLH 746
Query: 181 VSAETGRVE 189
GR++
Sbjct: 747 GLCLEGRLQ 755
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNTM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
+K A+R VFD M + IP + ++ K D A ++ M + P
Sbjct: 77 AKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVDEMLLA-GIRPN 135
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
RTY + + + KA+E + GL L+ ALLK ++GR+E
Sbjct: 136 ERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDVYTYEALLKACCKSGRIE 188
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 112 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVV----TYNSM 167
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRST
Sbjct: 168 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRST 225
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + ++ G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSS 283
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ + + D M +V+PN ++ D AF+L+++M + + P +
Sbjct: 488 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSN-GISPSI 546
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ + C + +A E+ + L + L+ G ++K Q+
Sbjct: 547 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQR 606
Query: 198 L-----RSTVRCVNE------ETGKIIEDWFSGQKV 222
+ +STVR ++ G++IE + QK+
Sbjct: 607 MHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + +++ +RV +M S V PN S + R + + D AF + ++M P
Sbjct: 318 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE--PDA 375
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FCE E E A +V ++M G+ + L+ E +K L++
Sbjct: 376 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 435
Query: 198 L 198
+
Sbjct: 436 M 436
>gi|339244411|ref|XP_003378131.1| conserved hypothetical protein [Trichinella spiralis]
gi|316972982|gb|EFV56624.1| conserved hypothetical protein [Trichinella spiralis]
Length = 535
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 150 NLEAEKAYEVEE--HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL-RSTVRCVN 206
+LE E + + HM ++ + + +L+ + E ++++ Y++ RS +
Sbjct: 178 SLEIEGPFTLSASCHMEML------KYLKVVLQKNGELESLKELDSYVEFYDRSQCLTFD 231
Query: 207 EETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVDESGK 266
E T ++ +++F+ K+N + N++ + + KW V G V + G
Sbjct: 232 ESTVELFKNYFASFKLNKIRL------NSIFSSS--------FPKIKWAVDCGIVTDDGC 277
Query: 267 CCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANI 326
C CG +L + + D + + + + + F+ F+ +NA ++ +VDG
Sbjct: 278 CSCCGGRLKQLTVSDEDFDSMKEEAFRGVRFQSLAKTFASFR---HENAPFDVVVDGYTT 334
Query: 327 G 327
G
Sbjct: 335 G 335
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
N LIN S K K + A + ++L+ ++ ++ L+ D K+ ++
Sbjct: 206 NALIN--SFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLI--------DALCKEGMMQM 255
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
+ F M ++PNE + +S+ + AF+L M E +V + TY L
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE-HVDLNIVTYTTLL 314
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
CE +A E+ MG G++ Q AL+ + ++K + ++R
Sbjct: 315 DGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMR 369
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L+ F + ++M N+ P+ + + A + D A L + M ++ N+ P + TY
Sbjct: 252 LKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHK-NMFPNIVTYT 310
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + M G+ LL + GR+E Q+ Q L
Sbjct: 311 SLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHL 367
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/174 (17%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
+ + C ++ L A+ L + ++ ++H +AL+ +C K L+
Sbjct: 138 TYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCI--------KCGQLKL 189
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
V++ M + ++PN + ++ + + A +++RM + + P RTY+ +
Sbjct: 190 ALDVWEDMQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMKFQ-GIEPVTRTYNTLM 248
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ + + A ++ E M G +L AL+ ++ G + +V +++
Sbjct: 249 IACNTSGQWQTALQLYEEMRAAGHALNTTSYNALISAHSKAGDLPQVLDTYRQM 302
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
+ S +H F++ D+M + PN + + + + A+ + +RM E P+L
Sbjct: 383 RSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGME-GCEPQL 441
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FC N + A +V + M G+ ++L+ R+E+ Y Q+
Sbjct: 442 NTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQE 501
Query: 198 L 198
+
Sbjct: 502 M 502
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 6/195 (3%)
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
H FD+ ++P+ + + + R A D A + M E N V L Y+
Sbjct: 191 HAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML-ENNCVVDLLAYNAL 249
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVR 203
L C++ + + AY++ + MG +GL + A + + V YQ L +++
Sbjct: 250 LDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDL 309
Query: 204 CVNEET-GKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVD 262
N T II+ +KV+ D L+ + +++ G + + V+
Sbjct: 310 VPNVYTFNHIIKTLCKNEKVD----DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 263 ESGKCCSCGDQLACV 277
+ K S D+ C+
Sbjct: 366 RATKLLSRMDRTKCL 380
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 56 LSLHHFNALLYLCSD--SATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAAS 113
+ L+ FN +Y C+ + S +D ++ + +ML + P+ A+ + + +
Sbjct: 189 MGLYGFNPSVYTCNAILGSVVKSGEDVSV---WSFLKEMLKRKICPDVATFNILINVLCA 245
Query: 114 KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ 173
+ + + L+++M P + TY+ L +C+ + A E+ +HM G+ +
Sbjct: 246 EGSFEKSSYLMQKMEKS-GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVC 304
Query: 174 EIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ 220
L+ + R+ K Y L+ +R + NE T + + FS +
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 18/192 (9%)
Query: 45 LYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104
+ + S+NL +L +N LL+ +K A+ F ++ M+ + +P++ S
Sbjct: 723 ILSTMKSKNLCFNLATYNILLH--------GYAKRHAMARCFMLYKDMIRHGFLPDKFSW 774
Query: 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164
S+ D A +++ + E +V+ R T++ + FCE E +KA+E+ + M
Sbjct: 775 HSLILGYCQSKSFDVAIKILRWITLEGHVIDRF-TFNMLITKFCERNEMKKAFELVKQMN 833
Query: 165 LMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNG 224
+ AL T K ++ LQ L E+G + + +NG
Sbjct: 834 QFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLL--------ESGSVPTNKQYITLING 885
Query: 225 VSCDLGLVKNAV 236
+ C +G +K A+
Sbjct: 886 M-CRVGNIKGAM 896
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
++SC + + +S + LR+ L ++ALL S + D +
Sbjct: 322 IKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDR--------Y 373
Query: 90 DQMLSNNVIPNEASVTSVAR-LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
+MLS V PN +V L N D ++ K +E + P TY + C
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS--PDTFTYTSMILGHC 431
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK--LRSTVRCVN 206
+ + A +V M G + L+ ++GRV + + +++ L + +
Sbjct: 432 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 491
Query: 207 EETGKIIEDWFSGQKVNGVSCDLGLVKNA 235
TG II CD+G ++A
Sbjct: 492 TCTGPII-----------ALCDMGCYEDA 509
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S P K +VFD+ML + P + + R+ + G+ F L+ +M
Sbjct: 337 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT---GEEVFELLAKMR- 392
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+ P + TY + C + + + + M + + ++ G++E
Sbjct: 393 KMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIE 452
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 221
+ Y Y ++++ NE +I+ WFSG++
Sbjct: 453 EAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQ 484
>gi|260766045|gb|ACX50053.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 187
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L G+ VF+ M+ PN A T + A + A L+ RM +E P +
Sbjct: 17 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDV 75
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + C+N E+A + + GL++ ++L+ + GR+++ + ++
Sbjct: 76 VTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEE 135
Query: 198 L 198
+
Sbjct: 136 M 136
>gi|341606817|gb|AEK83511.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHXFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + T + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGXVEDAIRLLHRMIDE-GFKPDVVTXSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 111 XFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|326527695|dbj|BAK08122.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 622
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
DQM +++PN AS V + + A L++RM + +VP +Y+ + +
Sbjct: 178 DQMREFHIVPNTASYNLVLKTMVKAREVQGAEKLVERM-LQTGIVPDDESYNLVVDLLLK 236
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ A+ A++ E M G ++ A ++V ++GR++ + ++K ++T
Sbjct: 237 HNRADSAFKYLELMLKSGYAVSSPVFAEYVRVCVKSGRLDTLASIIEKCKAT 288
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 12/173 (6%)
Query: 19 NPNPE-TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPS 76
N P+ ++ +Q+C +D T +SLY + L + H ++ ++ LC
Sbjct: 283 NVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLC-------- 334
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
K + VF+ M N A T++ + + A L +RM NE P
Sbjct: 335 -KQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNE-GFEPD 392
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
TY + C++ + E+ + G+++ A+L+ + GR+E
Sbjct: 393 AVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 445
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 43/195 (22%)
Query: 42 AISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
AI ++E+ S L+ +L +NA++ C D +FD+ML N V P+
Sbjct: 239 AIKVFETMKSSGLKPNLVTYNAVIDACGKGGVD-------FNRAAEIFDEMLRNGVQPDR 291
Query: 102 ASVTSVARLA-------ASKN----------------------------DGDYAFVLIKR 126
+ S+ + A++N D AF ++
Sbjct: 292 ITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSE 351
Query: 127 MNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG 186
M + +++P + TY + + + ++A + M + L++ LL + A+ G
Sbjct: 352 MPRK-HIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLG 410
Query: 187 RVEKVYQYLQKLRST 201
R E+ +++ S+
Sbjct: 411 RFEEALNVCKEMESS 425
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
++ L FR +M+ + + S T + + D + +F + +M E ++P
Sbjct: 228 EEKVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKE-GIIPNK 286
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + +C+ E+A+ + M MG+ L++ L+ G ++V+Q L +
Sbjct: 287 VTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVE 346
Query: 198 L 198
+
Sbjct: 347 M 347
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 56 LSLHHFNALLYLCSD--SATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAAS 113
+ L+ FN +Y C+ + S +D ++ + +ML + P+ A+ + + +
Sbjct: 149 MGLYGFNPSVYTCNAILGSVVKSGEDVSV---WSFLKEMLKRKICPDVATFNILINVLCA 205
Query: 114 KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ 173
+ + + L+++M P + TY+ L +C+ + A E+ +HM G+ +
Sbjct: 206 EGSFEKSSYLMQKMEKS-GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVC 264
Query: 174 EIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ 220
L+ + R+ K Y L+ +R + NE T + + FS +
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 12/197 (6%)
Query: 18 TNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPS 76
NP+ ++ N LIN K K A++L+E H + + ++ +N+L+ D
Sbjct: 285 VNPDIQSYNILIN--GFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLI--------DGL 334
Query: 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136
K + + ++ D+M P+ + +S+ + GD A L+ ++ ++ + P
Sbjct: 335 CKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQ-GLQPN 393
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
+ TY + C+ E A + E + + G ++ ++ V G + L
Sbjct: 394 MYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLS 453
Query: 197 KLRSTVRCVNEETGKII 213
K+ N T +II
Sbjct: 454 KMEENGCIPNAVTYEII 470
>gi|341606819|gb|AEK83512.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHXFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + T + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGXVEDAIRLLHRMIDE-GFKPDVVTXSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 111 XFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
++ L FR +M+ + + S T + + D + +F + +M E ++P
Sbjct: 245 EEKVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKE-GIIPNK 303
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + +C+ E+A+ + M MG+ L++ L+ G ++V+Q L +
Sbjct: 304 VTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVE 363
Query: 198 L 198
+
Sbjct: 364 M 364
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 10/181 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
PN T+ +I + + KS L A+ L+ S + + + LL D K
Sbjct: 858 PNTITHNII-IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL--------DGLLKS 908
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
L +F++M+ PN A + D + A L KRM E + P L++
Sbjct: 909 GRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE-GIRPDLKS 967
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
Y + C CE + A E + GL L+ ++ + R+E+ +++
Sbjct: 968 YTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQ 1027
Query: 200 S 200
S
Sbjct: 1028 S 1028
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + +++ +RV +M S V PN S + R + + D AF + ++M P
Sbjct: 319 KTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCE--PDA 376
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY + FCE E E A +V ++M G+ + L+ E +K L++
Sbjct: 377 DTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEE 436
Query: 198 L 198
+
Sbjct: 437 M 437
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 10/177 (5%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K++ PN T + + + K + A + + L S+ +NAL+
Sbjct: 326 KEKGCEPNVHT-YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI-------- 376
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K+ + F + D M SN+ PN + + K A L+ +M E +
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM-LERKL 435
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
P L TY+ + C+ + E AY + M GL +Q + + + GRVE+
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
>gi|326494056|dbj|BAJ85490.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 622
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
DQM +++PN AS V + + A L++RM + +VP +Y+ + +
Sbjct: 178 DQMREFHIVPNTASYNLVLKTMVKAREVQGAEKLVERM-LQTGIVPDDESYNLVVDLLLK 236
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ A+ A++ E M G ++ A ++V ++GR++ + ++K ++T
Sbjct: 237 HNRADSAFKYLELMLKSGYAVSSPVFAEYVRVCVKSGRLDTLASIIEKCKAT 288
>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
[Burroughsia fastigiata]
Length = 348
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 113 KLFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 168
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 169 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 226
>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 352
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|341605685|gb|AEK82945.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKXDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 13/212 (6%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSA 72
KKR PN +T F + ++ AI LY + L + +NAL+ LC +
Sbjct: 334 KKRGCVPNIQT-FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
+ + F +F MLS+ +P+ + + + D A V+ +M
Sbjct: 393 FETA---------FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA-G 442
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
P + TY+ ++ +C+ A + E M GL + L+ + G++E
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502
Query: 193 QYLQKLRSTVRCVNEET-GKIIEDWFSGQKVN 223
+ N T II+ +F+ KV+
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S P K +VFD+ML + P + + R+ + G+ F L+ +M
Sbjct: 377 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT---GEEVFELLAKMR- 432
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+ P + TY + C + + + + M + + ++ G++E
Sbjct: 433 KMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIE 492
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 221
+ Y Y ++++ NE +I+ WFSG++
Sbjct: 493 EAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQ 524
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 40 TTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99
+A +++ Q + + +N+LL + K + +++F +M SN + P
Sbjct: 230 VSACKVFDEMREQQCAVDVLAYNSLL--------EAFCKGGKVSEAYKMFREMGSNGIKP 281
Query: 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159
+ + + R ND A+ ++ M +++VP + TY+ + C+ + E+AY++
Sbjct: 282 DACTFSIFIRAYCEANDIHLAYRVLDEMKR-YDLVPNVFTYNCMIKKLCKKEKVEEAYQL 340
>gi|341606829|gb|AEK83517.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
Length = 208
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 45 LYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103
LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN A
Sbjct: 1 LYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNVAI 51
Query: 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
T + A + A L+ RM +E P + TY + C+N E+A + +
Sbjct: 52 YTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEALDYFQTC 110
Query: 164 GLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
G ++ ++L+ + GR+++ + +++
Sbjct: 111 RFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEM 145
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 56 LSLHHFNALLYLCSD--SATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAAS 113
+ L+ FN +Y C+ + S +D ++ + +ML + P+ A+ + + +
Sbjct: 149 MGLYGFNPSVYTCNAILGSVVKSGEDVSV---WSFLKEMLKRKICPDVATFNILINVLCA 205
Query: 114 KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ 173
+ + + L+++M P + TY+ L +C+ + A E+ +HM G+ +
Sbjct: 206 EGSFEKSSYLMQKMEKS-GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVC 264
Query: 174 EIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQ 220
L+ + R+ K Y L+ +R + NE T + + FS +
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 13/212 (6%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSA 72
KKR PN +T F + ++ AI LY + L + +NAL+ LC +
Sbjct: 334 KKRGCVPNIQT-FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
+ + F +F MLS+ +P+ + + + D A V+ +M
Sbjct: 393 FETA---------FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA-G 442
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
P + TY+ ++ +C+ A + E M GL + L+ + G++E
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHAT 502
Query: 193 QYLQKLRSTVRCVNEET-GKIIEDWFSGQKVN 223
+ N T II+ +F+ KV+
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 176 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 231
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 232 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 289
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 176 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 231
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 232 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 289
>gi|224057531|ref|XP_002299253.1| predicted protein [Populus trichocarpa]
gi|222846511|gb|EEE84058.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+F++M + PN+ + ++ A + D D AF L+ +M E +VP L T++ + F
Sbjct: 214 LFERMKLEGLEPNDFTWNALISGYARRGDSDGAFSLLSKMTRE-GLVPDLVTWNAMIAGF 272
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
+ A A+++ + M ++G+ +A LL +++
Sbjct: 273 VQGERAGDAFKLFQDMLVLGVKPNLVTVAGLLPACGMVSSIQR 315
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRH 84
++ + C S+D+ A+ L +N+ ++H F AL+ +C P +
Sbjct: 70 SYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKCGKLPLA------- 122
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
+++ M + N +PN + ++ + + A ++ M E V P LRTY+ +
Sbjct: 123 -LEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQE-GVEPVLRTYNTLI 180
Query: 145 F 145
Sbjct: 181 I 181
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 38 DLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
D A L+++ Q + L +N LL LC D + +F MLS
Sbjct: 231 DSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKN---------IFHDMLSKR 281
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
V P+ + + +D AF ++ +M +N++P + TY+ + C+N E+A
Sbjct: 282 VEPDAFTYSIFIHSYCDADDVQSAFRVLDKMR-RYNLLPNVFTYNCIIKQLCKNEHVEEA 340
Query: 157 YEVEEHM 163
Y++ + M
Sbjct: 341 YQLLDEM 347
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 11/161 (6%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRV 88
+Q+ K DL AI L + + +N ++ LC K+ ++ ++
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC---------KEKRMKDAEKL 239
Query: 89 FDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
FD+ML V PN + ++ + AF + +RM E NV P + T++ L C
Sbjct: 240 FDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE-NVEPTIITFNSLLNGLC 298
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
E+A V E M + G ++ L + G V+
Sbjct: 299 RAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVD 339
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|260780548|gb|ACX50820.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 183
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L G+ VF+ M+ PN A T + A + + A L+ RM +E P +
Sbjct: 19 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDV 77
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
T+ + C+N E+A + + GL++ ++L+ + GR+++ + ++
Sbjct: 78 VTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEE 137
Query: 198 L 198
+
Sbjct: 138 M 138
>gi|260780506|gb|ACX50799.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780508|gb|ACX50800.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780510|gb|ACX50801.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780512|gb|ACX50802.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780514|gb|ACX50803.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780516|gb|ACX50804.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780518|gb|ACX50805.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780520|gb|ACX50806.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780522|gb|ACX50807.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780524|gb|ACX50808.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780526|gb|ACX50809.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780528|gb|ACX50810.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780530|gb|ACX50811.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780532|gb|ACX50812.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780534|gb|ACX50813.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780536|gb|ACX50814.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780538|gb|ACX50815.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780540|gb|ACX50816.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780542|gb|ACX50817.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780544|gb|ACX50818.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780550|gb|ACX50821.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780552|gb|ACX50822.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780554|gb|ACX50823.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780556|gb|ACX50824.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780560|gb|ACX50826.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780562|gb|ACX50827.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780564|gb|ACX50828.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780566|gb|ACX50829.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780568|gb|ACX50830.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780570|gb|ACX50831.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780572|gb|ACX50832.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780574|gb|ACX50833.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780576|gb|ACX50834.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780578|gb|ACX50835.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780580|gb|ACX50836.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780582|gb|ACX50837.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780584|gb|ACX50838.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780586|gb|ACX50839.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780588|gb|ACX50840.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780590|gb|ACX50841.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780592|gb|ACX50842.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780594|gb|ACX50843.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780596|gb|ACX50844.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780598|gb|ACX50845.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780600|gb|ACX50846.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780602|gb|ACX50847.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780604|gb|ACX50848.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780606|gb|ACX50849.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780608|gb|ACX50850.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780610|gb|ACX50851.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780612|gb|ACX50852.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780614|gb|ACX50853.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780616|gb|ACX50854.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780618|gb|ACX50855.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780620|gb|ACX50856.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780622|gb|ACX50857.1| AT1G03560-like protein [Capsella bursa-pastoris]
gi|260780624|gb|ACX50858.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 183
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L G+ VF+ M+ PN A T + A + + A L+ RM +E P +
Sbjct: 19 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDV 77
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
T+ + C+N E+A + + GL++ ++L+ + GR+++ + ++
Sbjct: 78 VTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEE 137
Query: 198 L 198
+
Sbjct: 138 M 138
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 160 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 215
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 216 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 273
>gi|260780546|gb|ACX50819.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 182
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L G+ VF+ M+ PN A T + A + + A L+ RM +E P +
Sbjct: 18 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDV 76
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
T+ + C+N E+A + + GL++ ++L+ + GR+++ + ++
Sbjct: 77 VTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEE 136
Query: 198 L 198
+
Sbjct: 137 M 137
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 172 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 227
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 228 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 285
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSA 72
KKRK P+ + + + + K + + A++L + ++ ++ +N+L+ LC
Sbjct: 266 KKRKITPDRKVYNAV-IYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGK 324
Query: 73 TDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN 132
D + + +F ++L ++ P + + R+ +K + F L+ +M E
Sbjct: 325 VDEAKQ---------LFYEILKRHLSPTIQTFHAFFRILRTKEE---VFELLDKMK-ELG 371
Query: 133 VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVY 192
P + TY + FC + + +++ + M G+ ++ L+ G++E+ +
Sbjct: 372 CYPTIETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAH 431
Query: 193 QYLQKLRSTVRCVNEETGKIIEDWFSGQKVN 223
Y +++ +T ++++ W SG++
Sbjct: 432 TYYAEMQEKGFLPEPKTEEMLQAWVSGKQAT 462
>gi|341605689|gb|AEK82947.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKXDVVTYSXVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + ++ G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSS 283
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 6/145 (4%)
Query: 59 HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSV--ARLAASKND 116
H +N +Y S S D KD L +V +ML N+ PN T + +K D
Sbjct: 709 HGYNPNVYTYS-SLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTD 767
Query: 117 GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIA 176
Y +L M E P + TY + F + + +K E+ MG G +
Sbjct: 768 EAYKLML---MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824
Query: 177 ALLKVSAETGRVEKVYQYLQKLRST 201
L+ TG +++ Y L++++ T
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQT 849
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 2/151 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ + + D M+ +V PN S+ D + AF+L+++M N V +
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS-GVSASI 544
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ L C + + ++A E+ + GL + ++ G +K + LQ+
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Query: 198 L-RSTVRCVNEETGKIIEDWFSGQKVNGVSC 227
+ + +R ++ S +V+ + C
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMEC 635
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 32 SCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQ 91
+ K + + A +L S + + FN+L+ P K ++ ++ D
Sbjct: 330 ALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIR--------PLCKARQVQEARKMLDD 381
Query: 92 MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151
ML + P+ + ++ +A S + F L+ +M E P + T+ + FC
Sbjct: 382 MLGRGLSPSVRTFHALLDVARSPIE---VFDLLDKMK-ELQCDPEMDTFIMLIRKFCRWR 437
Query: 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGK 211
+ + ++ M GLS ++ L+ GR+E+ +Y +++++ ++T +
Sbjct: 438 QHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEE 497
Query: 212 IIEDWFSGQKVNGVSCDLG 230
+I+ W SG+++ S +G
Sbjct: 498 MIQAWLSGRELAKASASVG 516
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 176 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 231
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 232 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 289
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|260780558|gb|ACX50825.1| AT1G03560-like protein [Capsella bursa-pastoris]
Length = 176
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ L G+ VF+ M+ PN A T + A + + A L+ RM +E P +
Sbjct: 19 KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDE-GFKPDV 77
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
T+ + C+N E+A + + GL++ ++L+ + GR+++ + ++
Sbjct: 78 VTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEE 137
Query: 198 L 198
+
Sbjct: 138 M 138
>gi|422292828|gb|EKU20130.1| hypothetical protein NGA_2083900, partial [Nannochloropsis gaditana
CCMP526]
Length = 889
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 10/171 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+++C + A + E A L+ SL FNA+L C S+ A G +V
Sbjct: 269 VKACARVGAFGRARDVIEEARRDGLQPSLAAFNAILETC--------SRLGAWDEGSKVL 320
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
M V PNE S R + A L++ M + V P Y A+ C
Sbjct: 321 VDMRQAGVDPNEDSYAFTIRACVALKQWKQALFLLRSMKD-HGVFPNEHCYIAAIESCCR 379
Query: 150 NLEAEKAYEVEEHMGLMGL-SLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ ++ + M GL + E + +L + GR + L +++
Sbjct: 380 GGQWHSVVQLLDGMRAKGLEAPESVYLVKILPALSRAGRWRECSDTLDRMK 430
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255685744|gb|ACU28361.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTY 140
L G+ VF+ M+ PN A T + A + A L+ RM +E FN P + TY
Sbjct: 2 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN--PDVVTY 59
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GRV++ + +++
Sbjct: 60 SVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 117
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K+ + + D M+ +V PN S+ D + AF+L+++M N V +
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS-GVSASI 366
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ L C + + ++A E+ + GL + ++ G +K + LQ+
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Query: 198 L-----RSTVR 203
+ R T+R
Sbjct: 427 MNKYGIRPTLR 437
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVAR-LAASKNDGDYAFVLIKRMNNEFNVVPR 136
K L ++F++M S PN + +V + L SK AF+ ++M E VVP
Sbjct: 347 KAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMK-ENGVVPS 405
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
TY + FC+ EKA + E M G + +L+ + R E + Q
Sbjct: 406 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQ 465
Query: 197 KLR 199
+LR
Sbjct: 466 ELR 468
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 32 SCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQ 91
+ K + + A +L S + + FN+L+ P K ++ ++ D
Sbjct: 328 ALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLI--------RPLCKARQVQEARKMLDD 379
Query: 92 MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151
ML + P+ + ++ +A S + F L+ +M E P + T+ + FC
Sbjct: 380 MLGRGLSPSVRTFHALLDVARSPIE---VFDLLDKMK-ELQCDPEMDTFIMLIRKFCRWR 435
Query: 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGK 211
+ + ++ M GLS ++ L+ GR+E+ +Y +++++ ++T +
Sbjct: 436 QHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEE 495
Query: 212 IIEDWFSGQKVNGVSCDLG 230
+I+ W SG+++ S +G
Sbjct: 496 MIQAWLSGRELAKASASVG 514
>gi|50261843|gb|AAT72474.1| AT1G03560 [Arabidopsis lyrata subsp. petraea]
Length = 201
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTY 140
L G+ VF+ M+ PN A T + A + A L+ RM +E FN P + TY
Sbjct: 1 LYEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN--PDVVTY 58
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GRV++ + +++
Sbjct: 59 SVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 116
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L+ G F +M N +PN + ++ D AF L+K M+++ + P L +Y+
Sbjct: 26 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK-GMQPNLISYN 84
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
+ C ++A+E+ E MG G + ++ LL
Sbjct: 85 VIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/169 (17%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+ S K+++L A+ ++ + LR + + L+ D S+ L +R+
Sbjct: 157 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI--------DGFSRQGLLNEAYRIL 208
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
++M + P+ + + + A +++ M E + P + +Y + FC
Sbjct: 209 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV-EKGLAPDVVSYSTIISGFCR 267
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
E ++A+++++ M G+S + ++L++ E R+ + Q++
Sbjct: 268 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM 316
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 15 KRKTNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K++ NPN T N LIN K+ + TA L++ + + +N L+
Sbjct: 177 KQRINPNVVTYNTLIN--GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI-------- 226
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K L VFD+M+ +N +PN + T++ + A ++ M + V
Sbjct: 227 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GV 285
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
P + TY + FC+ ++A+++ E M G++
Sbjct: 286 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 176 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 231
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 232 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 289
>gi|410110101|gb|AFV61130.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
viburnoides]
Length = 337
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 113 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 168
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 169 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 226
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 176 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 231
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 232 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 289
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 177 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 232
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 233 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 290
>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 426
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 14/187 (7%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL--YLCSDS 71
K + NPN T F I + + +K + A L ++ + +N+L+ Y D
Sbjct: 259 KLKNINPNVCT-FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDE 317
Query: 72 ATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF 131
++H VF M V P+ T++ D A L + M ++
Sbjct: 318 ----------VKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHK- 366
Query: 132 NVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKV 191
N++P + TY+ + C+N E+A + + M G+ + LL ++GR+E
Sbjct: 367 NMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDA 426
Query: 192 YQYLQKL 198
+ Q+L
Sbjct: 427 KEIFQRL 433
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNTM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSS 283
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 155 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 210
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 211 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 268
>gi|224576649|gb|ACN56998.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 3 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 61
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GR+++ + +++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 118
>gi|224576639|gb|ACN56993.1| At1g03560-like protein [Capsella grandiflora]
Length = 196
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 3 LNEGYAVFENMIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 61
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GR+++ + +++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 118
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 39 LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98
L AI L+ +N++ + FN L+ D KD ++ G VF M+ +I
Sbjct: 128 LKDAIDLFNKIILENIKPDGYTFNILV--------DGFCKDRKMKEGKTVFAMMMKQGII 179
Query: 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNE---FNVV------PRLRTYDPALFCFCE 149
P+ + S+ DG + L+K +N FN + P +R+Y+ + FC+
Sbjct: 180 PDVVTYNSLV-------DG---YRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 229
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ +KA + M + +L+ +++GR+ Q + ++
Sbjct: 230 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH 279
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 70 DSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNN 129
+S P K ++ +FD ML + P+ + ++ +A + + F L+ +M
Sbjct: 350 NSLIGPLCKARQVQEAMEMFDAMLERGLSPSVRTFHALLNVARNSTE---VFDLLDKMK- 405
Query: 130 EFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189
+ P + TY + FC + E ++ M GLS ++ L+ GR+E
Sbjct: 406 QLQCEPEMDTYIMLIRKFCRWRQHESVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLE 465
Query: 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKV 222
+ +Y +++S ++T ++I W G+++
Sbjct: 466 EAAKYYGEMKSKGFSPEKKTEEMITAWLEGREL 498
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 10/177 (5%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K++ PN T + + + K + A + + L S+ +NAL+
Sbjct: 326 KEKGCEPNVHT-YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI-------- 376
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K+ + F + D M SN+ PN + + K A L+ +M E +
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKM-LERKL 435
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
P L TY+ + C+ + E AY + M GL +Q + + + GRVE+
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 173 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 228
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 229 MMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 286
>gi|242063818|ref|XP_002453198.1| hypothetical protein SORBIDRAFT_04g001540 [Sorghum bicolor]
gi|241933029|gb|EES06174.1| hypothetical protein SORBIDRAFT_04g001540 [Sorghum bicolor]
Length = 393
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 70/204 (34%), Gaps = 28/204 (13%)
Query: 17 KTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYL--------- 67
+ NP P L L S+ +R H +NAL+
Sbjct: 159 RPNPAPRGALLALADVVCHRGGLREISSILPVLRDHGVRADAHLYNALMKAHVAADDPGA 218
Query: 68 -------CSDSATDPS-----------SKDSALRHGFRVFDQMLSNNVIPNEASVTSVAR 109
D DP ++ +R M + +P+ + TS+
Sbjct: 219 VLRVFRQMKDDGVDPDLVTYNTLIFGLARAGMVRKARAFIHAMAAEGHLPDVITYTSLMN 278
Query: 110 LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
+ D A L++ M E P RTY+ L C+N + +KA EV + M G+
Sbjct: 279 GMCVQGDALGALKLLEEMEAE-GCQPNERTYNTLLMGLCKNKKLDKAVEVYKSMVGAGMK 337
Query: 170 LEQQEIAALLKVSAETGRVEKVYQ 193
L+ A+ ++ +G V Y+
Sbjct: 338 LDSPAYASYVRALCRSGSVADAYE 361
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+ QML +V PN + +S+ K + A L+++M ++ NVVP TY +
Sbjct: 386 IITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQ-NVVPNGFTYGTVIDGL 444
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS---TVRC 204
+ + E A E+ + M L+G+ + AL+ GR+++V ++ + S T+
Sbjct: 445 FKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDH 504
Query: 205 VNEETGKIIEDWFSG 219
+N + +I+ +F G
Sbjct: 505 INYTS--LIDVFFKG 517
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K A+ V M+ N V+PN + S+ S A +K+M+++ V P +
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDV 304
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
TY+ + C+N +A ++ + M GL E LL+ A G + +++ L
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
>gi|341605687|gb|AEK82946.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 43 ISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
++LY+ + +++ H F+ ++ LC K+ L G+ VF+ M+ PN
Sbjct: 2 VALYQEMDEKGIQVPPHVFSLVIGGLC---------KEGKLNEGYAVFENMIRKGSKPNV 52
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
A T + A + A L+ RM +E + TY + C+N E+A + +
Sbjct: 53 AIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKXDVVTYSVVVNGLCKNGRVEEALDYFQ 111
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
GL++ ++L+ + GR+++ + +++
Sbjct: 112 TCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEM 148
>gi|297811553|ref|XP_002873660.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319497|gb|EFH49919.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
L +C+K+ + T AI ++++ + ++ + ALL SA + K FRV+
Sbjct: 474 LVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL-----SALE---KGKLYDEAFRVW 525
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
+ M+ + PN + T++A + + + L+K M ++ + P + TY+ +
Sbjct: 526 NHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASK-GIEPSVVTYNAVISGCAR 584
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183
N + AYE M G +E EI + + A
Sbjct: 585 NGLSGVAYEWFHRM--RGEKVEPNEITYEMLIEA 616
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 142 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 197
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 198 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 255
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 71 SATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE 130
+ D K ++ F V +QM+ + PN + T++A + D A L+ M+ +
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481
Query: 131 FNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190
+ P + TY+ + C+ E+ ++ E M L G + L+ + G + K
Sbjct: 482 -GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAK 540
Query: 191 VYQYLQ 196
++ L+
Sbjct: 541 AHELLR 546
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 160 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 215
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 216 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 273
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNXM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 130 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 185
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 186 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 9/171 (5%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+Q K D+ + +Y+ FN L+ D +K + VF
Sbjct: 72 IQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILI--------DSLAKADQVEEACNVF 123
Query: 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE 149
M NV P+ + T + R + D L + M + P L TY + F
Sbjct: 124 GDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQ-GCQPNLFTYHSVMHAFGS 182
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
++A ++ + M GL + L+ +TG++E+ + ++ K RS
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS 233
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+F +M N+IPN + TS+ YA L+ M++ V P + TY L
Sbjct: 340 LFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDR-GVPPDIITYSSILDAL 398
Query: 148 CENLEAEKAY--------EVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
C+N + +KA +V E + + G +L+ +++ G + L K+
Sbjct: 399 CKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKME 458
Query: 200 STVRCVNEETGKII 213
R + +T +II
Sbjct: 459 DNGRIPDAKTYEII 472
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 130 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 185
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 186 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 176 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 231
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 232 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSS 289
>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
cujabensis]
Length = 359
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 130 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 185
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 186 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 243
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVAR-LAASKNDGDYAFVLIKRMNNEFNVVPR 136
K L ++F++M S PN + +V + L SK AF+ ++M E VVP
Sbjct: 347 KAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMK-ENGVVPS 405
Query: 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
TY + FC+ EKA + E M G + +L+ + R E + Q
Sbjct: 406 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQ 465
Query: 197 KLR 199
+LR
Sbjct: 466 ELR 468
>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rhodocnemis]
Length = 345
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 113 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 168
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 169 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 226
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 187 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|410110097|gb|AFV61128.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
rugosa]
Length = 348
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 113 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 168
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 169 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 226
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 113 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 168
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 169 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 226
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSS 283
>gi|297812073|ref|XP_002873920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319757|gb|EFH50179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 483
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + G +++ML N S +V R S D AF + K+M+ E V P
Sbjct: 365 KRGEISLGEAFYNEMLRNGYGETTLSCNTVIRGLCSHGKSDEAFEIFKKMS-ETGVTPNA 423
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAAL---LKVSAETG 186
TY+ + C+ + EK ++ + + +GL AAL LK+S G
Sbjct: 424 ITYNALIKGLCKENKVEKGMKLYKELKALGLKPSGAAYAALVRNLKMSDSVG 475
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 28/195 (14%)
Query: 39 LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98
L AI L+ +N++ + FN L+ D KD ++ G VF M+ +I
Sbjct: 246 LKDAIDLFNKIILENIKPDGYTFNILV--------DGFCKDRKMKEGKTVFAMMMKQGII 297
Query: 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNE---FNVV------PRLRTYDPALFCFCE 149
P+ + S+ DG + L+K +N FN + P +R+Y+ + FC+
Sbjct: 298 PDVVTYNSLM-------DG---YCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK 347
Query: 150 NLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEET 209
+ +KA + M + +L+ +++GR+ Q + ++ N T
Sbjct: 348 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILT 407
Query: 210 -GKIIEDWFSGQKVN 223
II+ F +V+
Sbjct: 408 YNSIIDALFKTHQVD 422
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL S Y Q + ++ +N+++ LC D + V M+
Sbjct: 100 KEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKA---------MEVLTTMV 150
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
+ V+P+ + S+ S A V +K+M ++ V P + TY+ + C+N
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRC 209
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
+A ++ + M GL E LL+ A G + +++ L
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 251
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 16 RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATD 74
R P+ T + + C++++ L A+ L + L ++ FN L+ LC D
Sbjct: 364 RGCLPDTTTFNTLIVALCSQNR-LEEALDLARELTVKGLSPDVYTFNILINALCK--VGD 420
Query: 75 PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
P G R+F++M S+ P+E + + S A L+K M E N
Sbjct: 421 P-------HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEM--ESNGC 471
Query: 135 PR-LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
PR TY+ + C+ + E+A EV + M G+S L+ + R++ +
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531
Query: 194 YLQKL 198
++++
Sbjct: 532 LIEQM 536
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 27 LINLQSCTKSKDLTTAIS-LYESAHSQNLRL--SLH-HFNALLYLCSDSAT---DPSSKD 79
L+ +Q+ DL + IS L A NL++ SLH H LYL S T D +K
Sbjct: 274 LVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKVSGTALIDMYAKC 333
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
AL +FDQ+ ++I A ++S DG A L +M E N+ P T
Sbjct: 334 GALTFARALFDQIEPRDLILWNAMISSYG----IHGDGIEALSLFLKMK-ETNITPDHAT 388
Query: 140 YDPAL-FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ L C L E Y + + ++ A ++ + + G+VE+ YQ ++ +
Sbjct: 389 FASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESM 448
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K + G ++F +M ++ N + ++ + D D A +M+ F + P +
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDI 503
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
TY+ L C+N E EKA + E M + L+ +++ +TG+VE+ +
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 563
Query: 198 L 198
L
Sbjct: 564 L 564
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 131 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 186
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 244
>gi|255685730|gb|ACU28354.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685734|gb|ACU28356.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685738|gb|ACU28358.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685740|gb|ACU28359.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
gi|255685742|gb|ACU28360.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTY 140
L G+ VF+ M+ PN A T + A + A L+ RM +E FN P + TY
Sbjct: 2 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN--PDVVTY 59
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GRV+ + +++
Sbjct: 60 SVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEM 117
>gi|224576613|gb|ACN56980.1| At1g03560-like protein [Capsella rubella]
Length = 196
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 3 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 61
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GR+++ + +++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 118
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 29/210 (13%)
Query: 16 RKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATD 74
++ +PN E F I + + +++T A ++E Q L+ ++ +N+L+ LCS+ D
Sbjct: 293 KRIHPN-EITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 75 PS--------------------------SKDSALRHGFRVFDQMLSNNVIPNEASVTSVA 108
+ K L+ + D + + PN + ++
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Query: 109 RLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168
D AF L++ M + V P + TY+ + FC ++A ++ + M GL
Sbjct: 412 DAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 169 SLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ L+ + G K + L ++
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEM 500
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D +D + +VF++M + PN + S+ S D A L +M+ +
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG-MGL 365
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
P + TY+ + FC+ ++A E+ + +G GL+ L+ + GR++ +
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425
Query: 194 YLQKLRSTVRCVNEET 209
+ T C N T
Sbjct: 426 LRSMMLDTGVCPNVST 441
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 130 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 185
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 186 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSS 243
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
+++ PN T + I + + K+K + A+ +YE S +++L+++ + S
Sbjct: 331 QEKSCKPNVIT-YTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGR 389
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
L+ + VF+ M V P+ + ++ A + + + A L++RM + +
Sbjct: 390 --------LKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEED-SC 440
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
P ++TY P L C + + HM +S++ L+ ++G++E
Sbjct: 441 KPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACS 500
Query: 194 YLQKL 198
+ +++
Sbjct: 501 FFEEM 505
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 114 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 169
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 170 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 227
>gi|255685732|gb|ACU28355.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNE-FNVVPRLRTY 140
L G+ VF+ M+ PN A T + A + A L+ RM +E FN P + TY
Sbjct: 2 LXEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFN--PDVVTY 59
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GRV+ + +++
Sbjct: 60 SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDXAERLFEEM 117
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
++SC + + +S + LR+ L ++ALL S + D +
Sbjct: 152 IKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDR--------Y 203
Query: 90 DQMLSNNVIPNEASVTSVAR-LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
+MLS V PN +V L N D ++ K +E + P TY + C
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS--PDTFTYTSMILGHC 261
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK--LRSTVRCVN 206
+ + A +V M G + L+ ++GRV + + +++ L + +
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 207 EETGKIIEDWFSGQKVNGVSCDLGLVKNA 235
TG II CD+G ++A
Sbjct: 322 TCTGPII-----------ALCDMGCYEDA 339
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 10/150 (6%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K+R P+ T F + + ++ A+ +++ Q LR + +N L+
Sbjct: 396 KERGVPPDLCT-FTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI-------- 446
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D + L ++D M S + PN + + + K D AF + M N+ +
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK-GI 505
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHM 163
VP + TY+ + +C + K + M
Sbjct: 506 VPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
>gi|302821405|ref|XP_002992365.1| hypothetical protein SELMODRAFT_430583 [Selaginella moellendorffii]
gi|300139781|gb|EFJ06515.1| hypothetical protein SELMODRAFT_430583 [Selaginella moellendorffii]
Length = 704
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 31/201 (15%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
PN E + + +C K A+++YE+ +S+ +N L+ C
Sbjct: 109 TPN-EATYASLMLACRKLGQGERALTIYEAMKQTKEPISIRTYNTLISCCQQ-------- 159
Query: 79 DSALR--HGFRVFDQMLSNNVIPNEASVTSV-------ARLAASKNDGDYAFV------- 122
ALR FRV ++ V P+ + TS+ R+ ++ D + V
Sbjct: 160 --ALRMDDAFRVKKELEEAGVKPDVVTYTSLIDTVIRSTRIPPAQRFCDKSIVETCRLEK 217
Query: 123 ---LIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
L K M ++ P +TY+ + E EKA E+ + + +GLS LL
Sbjct: 218 ALQLYKEMQT-LSITPDSKTYNTLIQAAGEAKATEKALELYQSLTKVGLSANSFTFDLLL 276
Query: 180 KVSAETGRVEKVYQYLQKLRS 200
K GR++ Q + R+
Sbjct: 277 KCLGSGGRLKVALQVYNEARA 297
>gi|296192483|ref|XP_002744097.1| PREDICTED: pentatricopeptide repeat-containing protein 1
[Callithrix jacchus]
Length = 748
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSAL 82
E+N+ + + C ++ L A LY + L S + AL +C++S KDSAL
Sbjct: 222 ESNYTVLIGGCGRTGYLKKAFKLYNEMKKRGLEPSDATYTALFNVCAESPW----KDSAL 277
Query: 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134
+ ++ Q+ + N N + ++ ++AA D + K + ++ +VV
Sbjct: 278 QSALKLRQQLQARNFQLNLKTYHALLKMAAKCADLRMCLDVFKEIIHKGHVV 329
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 170 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 225
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 282
>gi|294661363|ref|YP_003573239.1| hypothetical protein Aasi_1879 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336514|gb|ACP21111.1| hypothetical protein Aasi_1879 [Candidatus Amoebophilus asiaticus
5a2]
Length = 339
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 58 LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSV-ARLAASKND 116
L+ F A L LCS R G Q+L+ + N+ ++ V AR S +
Sbjct: 137 LNRFQAFLKLCSG------------RIG-----QILNLTSLANDCGISHVTARQWISILE 179
Query: 117 GDYAFVLIKRMNNEFNV----VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQ 172
Y L+ F+ +P+L YD L C LE+E+ +VE H L G E
Sbjct: 180 TSYLVYLLPPYYQNFSKRIIKMPKLYFYDTGLACALLGLESEQ--QVETHY-LRGSLFEN 236
Query: 173 QEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213
I LLK GR +Y + K + C+ E + ++I
Sbjct: 237 LVINELLKFRFNQGRPSNLYFWRDKTGHEIDCIYELSDRLI 277
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 87 RVFDQMLSNNVIPNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPA 143
++F M + PN S ++ R+ A + + F L++R N E NVV TY+
Sbjct: 177 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNSM 232
Query: 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ + + LE EKA + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 233 MMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSS 290
>gi|224576657|gb|ACN57002.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 3 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 61
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GR+++ + +++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 118
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQML 93
K DL A Y + + ++ +N+++ LC A D + V M+
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKA---------MEVLTSMV 261
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
N V+PN + S+ S A +K+M+++ V P + TY+ + C+N
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGRC 320
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
+A ++ + M GL E LL+ A G + +++ L
Sbjct: 321 TEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 12/186 (6%)
Query: 42 AISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101
AI +Y + + L +N L++ S S +K ++ M P+E
Sbjct: 288 AIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAK--------KLLRVMAEKGHFPDE 339
Query: 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEE 161
+ TS+ K + A L++ M + P TY+ L C++ +KA E+
Sbjct: 340 VTYTSLMNGMCRKGETLAALALLEEMEMK-GCSPNTCTYNTLLHGLCKSRMFDKAMELYG 398
Query: 162 HMGLMGLSLEQQEIAALLKVSAETGRVE---KVYQYLQKLRSTVRCVNEETGKIIEDWFS 218
M GL L+ A ++ GRV +V+ Y + +S T + WF
Sbjct: 399 AMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTLKWFK 458
Query: 219 GQKVNG 224
K G
Sbjct: 459 KAKEEG 464
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K A+ V M+ N V+PN + S+ S A +K+M+++ V P +
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSD-GVEPDV 304
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYL 195
TY+ + C+N +A ++ + M GL E LL+ A G + +++ L
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 362
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 50/119 (42%)
Query: 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137
K +++ F + ++M+ N PN + TS+ K + AF L ++ N P +
Sbjct: 913 KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 972
Query: 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQ 196
TY + +C+ + +A + E M GL L+ + G K Y+ ++
Sbjct: 973 HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELME 1031
>gi|302768647|ref|XP_002967743.1| hypothetical protein SELMODRAFT_409004 [Selaginella moellendorffii]
gi|300164481|gb|EFJ31090.1| hypothetical protein SELMODRAFT_409004 [Selaginella moellendorffii]
Length = 704
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 31/201 (15%)
Query: 19 NPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSK 78
PN E + + +C K A+++YE+ +S+ +N L+ C
Sbjct: 109 TPN-EATYASLMLACRKLGQGERALTIYEAMKQTKEPISIRTYNTLISCCQQ-------- 159
Query: 79 DSALR--HGFRVFDQMLSNNVIPNEASVTSV-------ARLAASKNDGDYAFV------- 122
ALR FRV ++ V P+ + TS+ R+ ++ D + V
Sbjct: 160 --ALRMDDAFRVKKELEEAGVKPDVVTYTSLIDTVIRSTRIPPAQRFCDKSIVETCRLEK 217
Query: 123 ---LIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179
L K M ++ P +TY+ + E EKA E+ + + +GLS LL
Sbjct: 218 ALQLYKEMQT-LSITPDSKTYNTLIQAAGEAKATEKALELYQSLTKVGLSANSFTFDLLL 276
Query: 180 KVSAETGRVEKVYQYLQKLRS 200
K GR++ Q + R+
Sbjct: 277 KCLGSGGRLKVALQVYNEARA 297
>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 426
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 99 PNEASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK 155
PN S ++ R+ A + + F L++R N E NVV TY+ + + + LE EK
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVV----TYNTMMMIYGKTLEHEK 237
Query: 156 AYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
A + + M G+ + ++ + + G++++ QKLRS+
Sbjct: 238 ANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSS 283
>gi|224576653|gb|ACN57000.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 3 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 61
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GR+++ + +++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 118
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 39 LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98
L A++L++ SQ ++ ++ +N+L++ S + + R F QM+ ++
Sbjct: 130 LREAVNLFDEMVSQGIKANVITYNSLIH--------ASCRFGLWKEATRTFSQMVGEGIL 181
Query: 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYE 158
P+ + T++ + K A+ + + M + P + TY+ L C + + + A
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQ-GEAPNIVTYNSLLNGLCLHHQMDHAVR 240
Query: 159 VEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ E M G+ ++ L+ +G+ E+ +K++
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ 281
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D +D + +VF++M + PN + S+ S D A L +M+ +
Sbjct: 307 DGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSG-MGL 365
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
P + TY+ + FC+ ++A E+ + +G GL+ L+ + GR++ +
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425
Query: 194 YLQKLRSTVRCVNEET 209
+ T C N T
Sbjct: 426 LRSMMLDTGVCPNVST 441
>gi|255685750|gb|ACU28364.1| At1g03560-like protein [Arabidopsis lyrata subsp. petraea]
Length = 178
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L++RM +E P + TY
Sbjct: 2 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLQRMIDE-GFKPDVVTYS 60
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GRV++ + +++
Sbjct: 61 VVVNGLCKNGRVEEALDYFKTCRFNGLAINSMFYSSLIDGLGKVGRVDEAERLFEEM 117
>gi|255082023|ref|XP_002508230.1| predicted protein [Micromonas sp. RCC299]
gi|226523506|gb|ACO69488.1| predicted protein [Micromonas sp. RCC299]
Length = 261
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 19/182 (10%)
Query: 27 LINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLC---SDSATDPSSKDSALR 83
LI+ QS K D A Y + + ++ F LL C + S S D A
Sbjct: 63 LIDAQS--KGGDPNAAFETYGKMKAAGVSPTVVTFGCLLNACRHFASSGAGESDVDPA-E 119
Query: 84 HGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR----- 138
+ + +M V+PN+ ++ R+ + I M +E + R R
Sbjct: 120 LAYALLSEMSERGVVPNDRCQNALVRVVSEAGR-------IDDMLDEVKAIARRRGKFER 172
Query: 139 -TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197
T + + C AE+A + M + G S AL++V A G+V+ + Q+
Sbjct: 173 TTLEGVVRALCRASYAERALRILSWMDVRGYSPSAPTYRALVQVCATEGQVQWAWTLHQR 232
Query: 198 LR 199
+R
Sbjct: 233 MR 234
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 20/201 (9%)
Query: 37 KDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNN 96
K +T + S+ S +L+ FN LL S+++ V+ Q+ S+
Sbjct: 141 KRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQN--------VYAQIFSSG 192
Query: 97 VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156
V P+ + ++ + K A ++ ++ +F++ P TY + C N + +KA
Sbjct: 193 VKPSLLTFNTMINILCKKGKVQEAVLVFNKIF-QFDLCPDAFTYTSLILGHCRNRKLDKA 251
Query: 157 YEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDW 216
+EV + M G + + L+ GR+ + L+ E T K IE
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLE----------EMTEKGIEPT 301
Query: 217 FSGQKVNGVS-CDLGLVKNAV 236
V S CD+G V +A+
Sbjct: 302 VYTYTVPISSLCDIGRVDDAI 322
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Query: 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQML- 93
KSK A+ ++E ++ R + ++ L+ D K+ L+ +F +M+
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLI--------DGLCKEGRLKEAIDLFGRMIK 213
Query: 94 SNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA 153
S + +PN + S+ D A L++RM E P + TY + FC+
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARL 272
Query: 154 EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
+ AY++ M GL+ + +L+ R+ L ++R
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMR 318
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 24/209 (11%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
++SC + + +S + LR+ L ++ALL S + D +
Sbjct: 152 IKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDR--------Y 203
Query: 90 DQMLSNNVIPNEASVTSVAR-LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC 148
+MLS V PN +V L N D ++ K +E + P TY + C
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMS--PDTFTYTSMILGHC 261
Query: 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK--LRSTVRCVN 206
+ + A +V M G + L+ ++GRV + + +++ L + +
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321
Query: 207 EETGKIIEDWFSGQKVNGVSCDLGLVKNA 235
TG II CD+G ++A
Sbjct: 322 TCTGPII-----------ALCDMGCYEDA 339
>gi|224576625|gb|ACN56986.1| At1g03560-like protein [Capsella rubella]
gi|224576631|gb|ACN56989.1| At1g03560-like protein [Capsella rubella]
gi|224576633|gb|ACN56990.1| At1g03560-like protein [Capsella rubella]
Length = 196
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
L G+ VF+ M+ PN A T + A + A L+ RM +E P + TY
Sbjct: 3 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYS 61
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198
+ C+N E+A + + GL++ ++L+ + GR+++ + +++
Sbjct: 62 VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 118
>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 10/185 (5%)
Query: 14 KKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K+ PN T F + K+ DL +SLYE + L++ + AL+
Sbjct: 190 KRDALFPNVVT-FTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI-------- 240
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K ++ ++ +ML + V PN T++ + D D A + +M N+ +
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQ-GM 299
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQ 193
+ Y + C + ++A E+ E M L + ++ ++GR++
Sbjct: 300 RLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVN 359
Query: 194 YLQKL 198
KL
Sbjct: 360 MYHKL 364
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/188 (18%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 20 PNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKD 79
P+ +T + I ++ + +D + A +++ +N + L +NALL D K
Sbjct: 206 PSAKT-YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALL--------DALCKS 256
Query: 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139
+ G+++F +M + + P+ S D A+ ++ RM +++VP + T
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK-RYDLVPNVYT 315
Query: 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199
++ + C+N + + AY + + M G + + +++ + V + + L ++
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 200 STVRCVNE 207
T +C+ +
Sbjct: 376 RT-KCLPD 382
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 15 KRKTNPNPET-NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSAT 73
K++ NPN T N LIN K+ + TA L++ + + +N L+
Sbjct: 72 KQRINPNVVTYNTLIN--GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI-------- 121
Query: 74 DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV 133
D K L VFD+M+ +N +PN + T++ + A ++ M + V
Sbjct: 122 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GV 180
Query: 134 VPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169
P + TY + FC+ ++A+++ E M G++
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 216
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,187,337,981
Number of Sequences: 23463169
Number of extensions: 301650735
Number of successful extensions: 841888
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 868
Number of HSP's that attempted gapping in prelim test: 839223
Number of HSP's gapped (non-prelim): 2657
length of query: 442
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 296
effective length of database: 8,933,572,693
effective search space: 2644337517128
effective search space used: 2644337517128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)