Query 013498
Match_columns 442
No_of_seqs 224 out of 1919
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 11:42:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013498.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013498hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rmj_A 2-isopropylmalate synth 100.0 1.8E-92 6.2E-97 721.9 33.5 354 71-439 4-357 (370)
2 3ivs_A Homocitrate synthase, m 100.0 8.5E-89 2.9E-93 702.6 34.3 351 65-440 22-376 (423)
3 3hq1_A 2-isopropylmalate synth 100.0 1.4E-84 4.7E-89 695.7 31.9 350 77-440 69-451 (644)
4 2ztj_A Homocitrate synthase; ( 100.0 1.1E-82 3.7E-87 653.4 28.5 337 78-440 2-342 (382)
5 3eeg_A 2-isopropylmalate synth 100.0 1.4E-80 4.7E-85 624.9 25.8 316 76-403 3-318 (325)
6 3ble_A Citramalate synthase fr 100.0 8.9E-78 3E-82 607.7 32.8 318 76-410 16-337 (337)
7 3ewb_X 2-isopropylmalate synth 100.0 3E-67 1E-71 521.1 32.0 284 78-373 4-287 (293)
8 1ydo_A HMG-COA lyase; TIM-barr 100.0 1.8E-61 6.3E-66 482.5 25.4 282 76-382 3-302 (307)
9 2cw6_A Hydroxymethylglutaryl-C 100.0 3.1E-59 1.1E-63 464.7 27.5 277 76-377 2-296 (298)
10 2ftp_A Hydroxymethylglutaryl-C 100.0 5.9E-59 2E-63 463.6 28.6 276 76-376 5-298 (302)
11 1ydn_A Hydroxymethylglutaryl-C 100.0 3.6E-56 1.2E-60 441.8 28.4 270 77-371 2-289 (295)
12 1rqb_A Transcarboxylase 5S sub 100.0 7.3E-56 2.5E-60 468.9 19.5 313 75-425 20-366 (539)
13 2nx9_A Oxaloacetate decarboxyl 100.0 8.3E-55 2.8E-59 455.0 24.0 293 76-437 4-318 (464)
14 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 2.2E-54 7.5E-59 438.1 26.4 277 77-393 6-297 (345)
15 3bg3_A Pyruvate carboxylase, m 100.0 1.8E-53 6.1E-58 464.3 16.5 276 65-377 88-397 (718)
16 3dxi_A Putative aldolase; TIM 100.0 2.5E-51 8.6E-56 410.8 18.5 275 79-398 2-295 (320)
17 2qf7_A Pyruvate carboxylase pr 100.0 3.6E-49 1.2E-53 452.0 18.2 308 66-437 537-869 (1165)
18 3hbl_A Pyruvate carboxylase; T 100.0 4.6E-46 1.6E-50 425.7 21.5 300 66-437 519-852 (1150)
19 2ekc_A AQ_1548, tryptophan syn 98.9 2E-08 7E-13 97.4 15.1 177 98-310 28-231 (262)
20 3nav_A Tryptophan synthase alp 98.5 1.5E-06 5.1E-11 84.7 13.9 175 99-310 32-234 (271)
21 3vnd_A TSA, tryptophan synthas 98.4 2.3E-06 7.8E-11 83.3 12.4 176 98-310 29-232 (267)
22 1qop_A Tryptophan synthase alp 98.4 2.5E-06 8.5E-11 82.8 12.3 178 97-310 27-231 (268)
23 3t7v_A Methylornithine synthas 98.3 9.7E-05 3.3E-09 73.7 21.6 219 96-337 89-335 (350)
24 3f4w_A Putative hexulose 6 pho 98.0 1.8E-05 6.2E-10 73.2 9.0 173 98-311 10-185 (211)
25 1rd5_A Tryptophan synthase alp 97.8 0.00012 4E-09 70.4 12.1 170 98-312 29-229 (262)
26 3tha_A Tryptophan synthase alp 97.6 0.0002 6.8E-09 68.9 9.0 174 99-310 26-224 (252)
27 1r30_A Biotin synthase; SAM ra 97.5 0.014 4.8E-07 58.4 21.9 216 96-337 97-332 (369)
28 3iix_A Biotin synthetase, puta 97.4 0.03 1E-06 55.2 22.2 191 96-311 82-291 (348)
29 3ajx_A 3-hexulose-6-phosphate 97.0 0.015 5E-07 53.2 14.9 167 98-311 10-184 (207)
30 1geq_A Tryptophan synthase alp 96.7 0.06 2E-06 50.6 16.3 168 97-311 15-218 (248)
31 4e38_A Keto-hydroxyglutarate-a 96.5 0.014 4.7E-07 55.4 10.5 155 98-309 43-198 (232)
32 3tak_A DHDPS, dihydrodipicolin 96.4 0.78 2.7E-05 44.4 23.1 194 97-335 18-220 (291)
33 3lab_A Putative KDPG (2-keto-3 96.3 0.027 9.4E-07 52.8 11.4 153 97-308 21-182 (217)
34 2dqw_A Dihydropteroate synthas 96.3 0.18 6.1E-06 49.4 17.6 165 77-274 29-218 (294)
35 3qxb_A Putative xylose isomera 96.3 0.082 2.8E-06 51.1 15.2 202 105-338 39-278 (316)
36 1qtw_A Endonuclease IV; DNA re 96.3 0.47 1.6E-05 44.5 20.1 233 104-364 15-279 (285)
37 3lye_A Oxaloacetate acetyl hyd 96.3 0.49 1.7E-05 46.5 20.5 227 107-357 38-286 (307)
38 2h9a_B CO dehydrogenase/acetyl 96.0 0.093 3.2E-06 51.8 13.9 138 80-258 51-211 (310)
39 3tr9_A Dihydropteroate synthas 96.0 0.66 2.3E-05 45.7 19.6 197 80-311 31-272 (314)
40 3p6l_A Sugar phosphate isomera 96.0 0.14 4.8E-06 47.9 14.5 202 79-339 11-229 (262)
41 1mxs_A KDPG aldolase; 2-keto-3 95.8 0.12 4.2E-06 48.5 13.2 153 99-310 36-192 (225)
42 3txv_A Probable tagatose 6-pho 95.7 0.36 1.2E-05 49.7 16.9 200 97-312 28-288 (450)
43 3tva_A Xylose isomerase domain 95.6 0.2 6.8E-06 47.5 14.3 199 106-339 26-253 (290)
44 1wa3_A 2-keto-3-deoxy-6-phosph 95.6 0.95 3.2E-05 40.9 18.3 159 97-312 18-177 (205)
45 2qul_A D-tagatose 3-epimerase; 95.6 0.066 2.3E-06 50.6 10.8 211 80-338 4-239 (290)
46 1tx2_A DHPS, dihydropteroate s 95.6 0.57 1.9E-05 45.8 17.5 204 77-312 40-275 (297)
47 3ngf_A AP endonuclease, family 95.6 0.34 1.2E-05 45.5 15.6 190 98-338 23-240 (269)
48 1vhc_A Putative KHG/KDPG aldol 95.6 0.13 4.4E-06 48.3 12.3 154 98-310 26-183 (224)
49 2x7v_A Probable endonuclease 4 95.5 0.38 1.3E-05 45.2 15.6 222 105-362 16-277 (287)
50 3lmz_A Putative sugar isomeras 95.5 0.45 1.5E-05 44.3 15.8 199 79-339 19-225 (257)
51 2qw5_A Xylose isomerase-like T 95.4 0.29 9.8E-06 47.7 14.8 191 105-338 35-274 (335)
52 2yci_X 5-methyltetrahydrofolat 95.4 0.19 6.4E-06 48.6 13.1 180 81-290 15-208 (271)
53 1tv8_A MOAA, molybdenum cofact 95.3 0.37 1.3E-05 47.2 15.4 140 96-249 48-190 (340)
54 3qze_A DHDPS, dihydrodipicolin 95.3 2.3 8E-05 41.6 24.2 194 97-335 40-242 (314)
55 1wbh_A KHG/KDPG aldolase; lyas 95.3 0.16 5.5E-06 47.3 12.0 154 98-310 25-182 (214)
56 1xky_A Dihydrodipicolinate syn 95.3 1.9 6.3E-05 42.0 20.3 193 97-334 29-230 (301)
57 2wqp_A Polysialic acid capsule 95.3 0.78 2.7E-05 45.9 17.7 179 97-314 31-237 (349)
58 1h1y_A D-ribulose-5-phosphate 95.3 0.26 8.8E-06 45.9 13.4 166 102-310 20-198 (228)
59 1h5y_A HISF; histidine biosynt 95.2 0.2 6.7E-06 46.4 12.4 214 82-336 8-247 (253)
60 3oa3_A Aldolase; structural ge 95.2 2.2 7.7E-05 41.4 20.1 200 80-313 59-263 (288)
61 3fa4_A 2,3-dimethylmalate lyas 95.2 0.78 2.7E-05 45.0 16.9 225 107-357 31-278 (302)
62 1aj0_A DHPS, dihydropteroate s 95.2 1.6 5.5E-05 42.3 19.0 163 80-274 18-206 (282)
63 3jr2_A Hexulose-6-phosphate sy 95.2 0.078 2.7E-06 49.1 9.3 167 98-310 16-191 (218)
64 2qjg_A Putative aldolase MJ040 95.1 0.81 2.8E-05 43.4 16.7 171 101-312 45-236 (273)
65 3r12_A Deoxyribose-phosphate a 95.1 0.79 2.7E-05 44.0 16.4 194 80-313 44-245 (260)
66 3flu_A DHDPS, dihydrodipicolin 95.1 2.5 8.7E-05 40.9 22.6 215 97-365 24-247 (297)
67 3si9_A DHDPS, dihydrodipicolin 95.0 2.9 0.0001 40.9 21.9 195 97-335 39-242 (315)
68 3kws_A Putative sugar isomeras 95.0 2.4 8.1E-05 39.9 19.7 211 77-339 25-256 (287)
69 2v82_A 2-dehydro-3-deoxy-6-pho 95.0 0.95 3.3E-05 41.1 16.2 159 98-312 16-175 (212)
70 1eye_A DHPS 1, dihydropteroate 95.0 2.7 9.1E-05 40.7 20.0 163 80-274 9-198 (280)
71 3na8_A Putative dihydrodipicol 95.0 2.7 9.3E-05 41.1 20.4 195 97-335 41-244 (315)
72 3m5v_A DHDPS, dihydrodipicolin 94.9 3 0.0001 40.5 23.7 194 97-335 24-227 (301)
73 3h5d_A DHDPS, dihydrodipicolin 94.9 1.8 6E-05 42.4 18.7 192 98-335 25-226 (311)
74 2yw3_A 4-hydroxy-2-oxoglutarat 94.9 0.12 4E-06 47.8 9.7 155 99-311 23-177 (207)
75 3o1n_A 3-dehydroquinate dehydr 94.9 3 0.0001 40.2 20.1 235 67-336 17-273 (276)
76 2ojp_A DHDPS, dihydrodipicolin 94.8 3 0.0001 40.2 20.8 194 97-335 18-220 (292)
77 3daq_A DHDPS, dihydrodipicolin 94.8 1.8 6.2E-05 41.9 18.4 195 97-335 19-222 (292)
78 1ub3_A Aldolase protein; schif 94.8 1.4 4.9E-05 41.0 16.9 190 82-313 6-205 (220)
79 3eb2_A Putative dihydrodipicol 94.8 3.2 0.00011 40.2 21.8 194 97-335 21-223 (300)
80 3qc0_A Sugar isomerase; TIM ba 94.8 0.8 2.7E-05 42.5 15.3 215 79-339 6-242 (275)
81 1w8s_A FBP aldolase, fructose- 94.8 1.2 4.2E-05 42.4 16.8 175 99-311 39-229 (263)
82 2vef_A Dihydropteroate synthas 94.7 1.3 4.4E-05 43.6 17.0 165 80-275 13-223 (314)
83 1ujp_A Tryptophan synthase alp 94.6 0.33 1.1E-05 46.8 12.4 169 99-310 28-226 (271)
84 1k77_A EC1530, hypothetical pr 94.6 1.1 3.6E-05 41.4 15.6 191 98-338 15-233 (260)
85 3vni_A Xylose isomerase domain 94.6 2.1 7.2E-05 40.2 17.9 192 104-338 20-238 (294)
86 3m0z_A Putative aldolase; MCSG 94.5 0.44 1.5E-05 44.7 12.4 162 98-276 48-248 (249)
87 1vli_A Spore coat polysacchari 94.5 1.1 3.9E-05 45.3 16.4 98 208-314 149-249 (385)
88 3ngj_A Deoxyribose-phosphate a 94.4 2.4 8.1E-05 40.1 17.4 197 80-313 28-229 (239)
89 2y5s_A DHPS, dihydropteroate s 94.3 1.8 6.1E-05 42.2 17.0 163 78-274 24-215 (294)
90 1rvg_A Fructose-1,6-bisphospha 94.3 2.7 9.1E-05 41.2 18.1 186 97-311 24-251 (305)
91 3d0c_A Dihydrodipicolinate syn 94.2 4.4 0.00015 39.5 20.2 193 97-334 29-228 (314)
92 3q94_A Fructose-bisphosphate a 94.2 1.9 6.4E-05 42.0 16.8 184 97-312 28-235 (288)
93 1rpx_A Protein (ribulose-phosp 94.2 0.15 5E-06 47.4 8.7 167 102-313 24-207 (230)
94 2vp8_A Dihydropteroate synthas 94.2 1.6 5.3E-05 43.1 16.3 161 79-274 44-238 (318)
95 3aal_A Probable endonuclease 4 94.1 1.3 4.3E-05 42.3 15.5 200 104-338 21-255 (303)
96 2e6f_A Dihydroorotate dehydrog 94.0 1.2 4E-05 43.2 15.2 138 160-312 103-272 (314)
97 3bdk_A D-mannonate dehydratase 94.0 2.9 9.8E-05 42.3 18.4 99 235-338 201-323 (386)
98 2zvr_A Uncharacterized protein 93.9 1.2 4E-05 42.1 14.7 191 101-338 41-256 (290)
99 2isw_A Putative fructose-1,6-b 93.9 2.8 9.7E-05 41.3 17.6 185 97-312 25-254 (323)
100 3qja_A IGPS, indole-3-glycerol 93.9 1.4 5E-05 42.3 15.2 164 102-310 73-239 (272)
101 2v9d_A YAGE; dihydrodipicolini 93.7 5.9 0.0002 39.2 22.8 217 97-363 48-273 (343)
102 3noy_A 4-hydroxy-3-methylbut-2 93.7 2.6 8.9E-05 42.1 16.9 143 74-225 26-184 (366)
103 4hb7_A Dihydropteroate synthas 93.7 4.4 0.00015 39.0 18.0 168 75-274 5-191 (270)
104 3oa3_A Aldolase; structural ge 93.6 0.88 3E-05 44.3 13.1 149 161-334 72-226 (288)
105 1gvf_A Tagatose-bisphosphate a 93.6 3.4 0.00012 40.1 17.3 182 97-312 25-231 (286)
106 1bxb_A Xylose isomerase; xylos 93.6 0.44 1.5E-05 47.8 11.5 204 98-338 33-279 (387)
107 3l21_A DHDPS, dihydrodipicolin 93.5 0.38 1.3E-05 47.1 10.4 85 228-314 30-118 (304)
108 3ndo_A Deoxyribose-phosphate a 93.3 2.4 8.3E-05 39.9 15.2 195 81-313 15-219 (231)
109 3a5f_A Dihydrodipicolinate syn 93.3 6.1 0.00021 38.0 20.3 193 98-335 19-220 (291)
110 3nvt_A 3-deoxy-D-arabino-heptu 93.1 1.4 4.8E-05 44.6 14.3 176 99-313 154-348 (385)
111 3tak_A DHDPS, dihydrodipicolin 93.1 0.38 1.3E-05 46.6 9.8 85 228-314 16-104 (291)
112 2hk0_A D-psicose 3-epimerase; 93.1 1.5 5.2E-05 41.8 14.0 207 79-338 22-257 (309)
113 1jub_A Dihydroorotate dehydrog 93.1 2.2 7.4E-05 41.3 15.2 139 160-312 103-270 (311)
114 2vc6_A MOSA, dihydrodipicolina 93.0 6.8 0.00023 37.7 22.5 195 97-335 17-220 (292)
115 3flu_A DHDPS, dihydrodipicolin 92.9 0.46 1.6E-05 46.2 10.1 85 228-314 22-110 (297)
116 3cpr_A Dihydrodipicolinate syn 92.9 7.1 0.00024 37.8 20.6 191 97-334 33-232 (304)
117 1to3_A Putative aldolase YIHT; 92.9 3 0.0001 40.7 16.0 133 163-312 112-253 (304)
118 2wkj_A N-acetylneuraminate lya 92.9 0.49 1.7E-05 46.2 10.2 86 228-315 26-115 (303)
119 1tqj_A Ribulose-phosphate 3-ep 92.9 0.27 9.3E-06 46.0 8.0 167 101-310 17-198 (230)
120 1vli_A Spore coat polysacchari 92.8 0.86 3E-05 46.1 12.1 139 108-275 128-279 (385)
121 3obe_A Sugar phosphate isomera 92.8 0.95 3.2E-05 43.6 12.1 213 79-339 22-272 (305)
122 3b4u_A Dihydrodipicolinate syn 92.8 0.62 2.1E-05 45.2 10.8 102 228-334 18-123 (294)
123 2ehh_A DHDPS, dihydrodipicolin 92.8 7.3 0.00025 37.5 23.6 194 98-335 18-220 (294)
124 3r12_A Deoxyribose-phosphate a 92.7 1.9 6.6E-05 41.3 13.8 151 160-335 56-212 (260)
125 1xky_A Dihydrodipicolinate syn 92.7 0.52 1.8E-05 46.0 10.1 85 228-314 27-115 (301)
126 1zco_A 2-dehydro-3-deoxyphosph 92.6 0.7 2.4E-05 44.3 10.7 153 100-275 73-258 (262)
127 2r8w_A AGR_C_1641P; APC7498, d 92.5 0.57 1.9E-05 46.4 10.2 101 228-334 49-153 (332)
128 1vzw_A Phosphoribosyl isomeras 92.5 0.45 1.5E-05 44.3 9.0 169 102-310 33-219 (244)
129 3dx5_A Uncharacterized protein 92.5 0.088 3E-06 49.8 4.1 155 164-336 85-246 (286)
130 1o5k_A DHDPS, dihydrodipicolin 92.4 8.3 0.00028 37.4 23.8 197 98-335 30-235 (306)
131 3q58_A N-acetylmannosamine-6-p 92.4 4.8 0.00016 37.5 16.0 161 98-312 33-209 (229)
132 3a5f_A Dihydrodipicolinate syn 92.4 0.56 1.9E-05 45.5 9.8 81 231-313 19-103 (291)
133 3s5o_A 4-hydroxy-2-oxoglutarat 92.3 0.62 2.1E-05 45.5 10.1 84 228-313 29-116 (307)
134 1f6k_A N-acetylneuraminate lya 92.3 0.68 2.3E-05 44.9 10.3 86 228-315 18-108 (293)
135 3igs_A N-acetylmannosamine-6-p 92.2 7.4 0.00025 36.2 17.3 160 98-312 33-209 (232)
136 3daq_A DHDPS, dihydrodipicolin 92.2 0.49 1.7E-05 45.9 9.1 99 230-334 19-121 (292)
137 3dz1_A Dihydrodipicolinate syn 92.2 0.82 2.8E-05 44.8 10.8 99 228-334 23-125 (313)
138 3s5o_A 4-hydroxy-2-oxoglutarat 92.2 9 0.00031 37.1 22.4 197 97-335 31-236 (307)
139 4dpp_A DHDPS 2, dihydrodipicol 92.1 0.68 2.3E-05 46.5 10.3 117 213-335 58-179 (360)
140 3cpr_A Dihydrodipicolinate syn 92.0 0.78 2.7E-05 44.8 10.4 86 228-315 31-120 (304)
141 3eoo_A Methylisocitrate lyase; 92.0 2.6 8.9E-05 41.1 14.0 109 197-311 66-189 (298)
142 1ka9_F Imidazole glycerol phos 92.0 1.6 5.4E-05 40.6 12.1 195 101-336 31-245 (252)
143 3ih1_A Methylisocitrate lyase; 92.0 3.2 0.00011 40.7 14.6 131 174-312 47-194 (305)
144 3fkr_A L-2-keto-3-deoxyarabona 92.0 0.58 2E-05 45.8 9.4 85 228-314 23-111 (309)
145 3eoo_A Methylisocitrate lyase; 91.9 1.6 5.3E-05 42.7 12.3 205 107-337 35-261 (298)
146 1qwg_A PSL synthase;, (2R)-pho 91.9 1.3 4.5E-05 42.1 11.4 150 105-272 27-197 (251)
147 2ehh_A DHDPS, dihydrodipicolin 91.9 0.67 2.3E-05 45.0 9.7 84 229-314 16-103 (294)
148 3e96_A Dihydrodipicolinate syn 91.8 0.7 2.4E-05 45.4 9.9 102 228-335 27-131 (316)
149 2r8w_A AGR_C_1641P; APC7498, d 91.8 11 0.00036 37.2 20.8 196 97-335 51-257 (332)
150 3qfe_A Putative dihydrodipicol 91.7 10 0.00036 37.0 22.9 217 97-366 28-257 (318)
151 3n9r_A Fructose-bisphosphate a 91.7 2 6.9E-05 42.1 12.9 189 97-312 24-254 (307)
152 2ojp_A DHDPS, dihydrodipicolin 91.7 0.45 1.5E-05 46.1 8.3 101 228-334 16-120 (292)
153 2fli_A Ribulose-phosphate 3-ep 91.6 0.71 2.4E-05 42.1 9.1 172 100-313 15-198 (220)
154 3vnd_A TSA, tryptophan synthas 91.6 2.4 8.4E-05 40.6 13.2 171 163-354 32-222 (267)
155 3aam_A Endonuclease IV, endoiv 91.6 1.2 4.2E-05 41.5 11.0 192 103-337 16-239 (270)
156 3b4u_A Dihydrodipicolinate syn 91.6 10 0.00034 36.5 20.8 196 97-334 20-226 (294)
157 3glc_A Aldolase LSRF; TIM barr 91.6 4.3 0.00015 39.5 15.0 123 164-312 130-256 (295)
158 2ze3_A DFA0005; organic waste 91.6 2.3 7.8E-05 41.0 13.0 75 197-275 59-138 (275)
159 3l21_A DHDPS, dihydrodipicolin 91.5 11 0.00036 36.6 19.8 192 97-335 32-232 (304)
160 2yxg_A DHDPS, dihydrodipicolin 91.5 0.84 2.9E-05 44.2 10.0 85 229-315 16-104 (289)
161 3d0c_A Dihydrodipicolinate syn 91.5 0.87 3E-05 44.7 10.2 86 228-315 27-115 (314)
162 3ovp_A Ribulose-phosphate 3-ep 91.5 1.4 4.7E-05 41.3 11.0 164 103-310 19-194 (228)
163 3tsm_A IGPS, indole-3-glycerol 91.5 2.8 9.5E-05 40.4 13.4 157 103-310 81-246 (272)
164 2q02_A Putative cytoplasmic pr 91.5 3.5 0.00012 38.0 14.0 202 98-338 19-238 (272)
165 2rfg_A Dihydrodipicolinate syn 91.5 11 0.00036 36.5 22.0 193 97-334 17-218 (297)
166 2vc6_A MOSA, dihydrodipicolina 91.4 0.66 2.2E-05 45.0 9.1 85 229-315 16-104 (292)
167 1zlp_A PSR132, petal death pro 91.4 3 0.0001 41.1 13.9 204 107-337 52-279 (318)
168 3si9_A DHDPS, dihydrodipicolin 91.4 0.77 2.6E-05 45.1 9.7 85 228-314 37-125 (315)
169 1o5k_A DHDPS, dihydrodipicolin 91.4 0.76 2.6E-05 44.9 9.6 85 228-314 27-115 (306)
170 3tdn_A FLR symmetric alpha-bet 91.4 0.32 1.1E-05 45.6 6.6 68 102-182 36-107 (247)
171 1yx1_A Hypothetical protein PA 91.4 0.36 1.2E-05 45.1 7.0 191 104-336 26-224 (264)
172 2wqp_A Polysialic acid capsule 91.3 1.4 4.9E-05 43.9 11.5 148 97-274 87-266 (349)
173 3eol_A Isocitrate lyase; seatt 91.3 13 0.00043 38.1 18.6 204 163-384 160-406 (433)
174 3qze_A DHDPS, dihydrodipicolin 91.3 0.85 2.9E-05 44.8 9.8 85 228-314 38-126 (314)
175 1xg4_A Probable methylisocitra 91.3 2.5 8.7E-05 41.1 13.1 111 197-312 61-186 (295)
176 1i60_A IOLI protein; beta barr 91.3 2.1 7E-05 39.6 12.1 198 98-338 14-239 (278)
177 2rfg_A Dihydrodipicolinate syn 91.2 0.71 2.4E-05 44.9 9.1 100 229-334 16-119 (297)
178 2v9d_A YAGE; dihydrodipicolini 91.2 0.78 2.7E-05 45.6 9.5 85 228-314 46-134 (343)
179 3qfe_A Putative dihydrodipicol 91.2 0.67 2.3E-05 45.6 8.9 85 228-314 26-114 (318)
180 3eb2_A Putative dihydrodipicol 91.1 0.58 2E-05 45.6 8.4 84 228-313 19-106 (300)
181 1vr6_A Phospho-2-dehydro-3-deo 91.1 8.2 0.00028 38.4 16.8 178 98-315 117-314 (350)
182 3ctl_A D-allulose-6-phosphate 91.0 0.74 2.5E-05 43.2 8.7 162 106-311 18-193 (231)
183 1vcv_A Probable deoxyribose-ph 90.9 2.6 8.7E-05 39.5 12.2 156 80-254 51-220 (226)
184 1vr6_A Phospho-2-dehydro-3-deo 90.9 0.77 2.6E-05 45.9 9.1 154 100-275 156-341 (350)
185 1vcv_A Probable deoxyribose-ph 90.8 10 0.00036 35.3 19.2 187 96-313 12-220 (226)
186 1xim_A D-xylose isomerase; iso 90.8 0.71 2.4E-05 46.4 8.9 174 98-292 33-249 (393)
187 3h5d_A DHDPS, dihydrodipicolin 90.8 0.8 2.7E-05 44.9 9.0 85 228-314 22-111 (311)
188 1n7k_A Deoxyribose-phosphate a 90.7 11 0.00038 35.3 19.4 190 80-312 21-220 (234)
189 1s2w_A Phosphoenolpyruvate pho 90.7 11 0.00039 36.5 17.1 205 107-337 32-260 (295)
190 1thf_D HISF protein; thermophI 90.7 0.74 2.5E-05 42.9 8.4 195 101-336 30-244 (253)
191 3ayv_A Putative uncharacterize 90.7 0.61 2.1E-05 43.2 7.7 137 101-244 10-154 (254)
192 1xi3_A Thiamine phosphate pyro 90.6 4.9 0.00017 36.1 13.7 158 102-313 27-190 (215)
193 3sz8_A 2-dehydro-3-deoxyphosph 90.6 3.5 0.00012 40.0 13.2 127 129-275 123-272 (285)
194 1rd5_A Tryptophan synthase alp 90.6 6.3 0.00021 37.0 15.0 114 208-337 7-143 (262)
195 1vyr_A Pentaerythritol tetrani 90.6 2.7 9.2E-05 42.0 12.9 129 171-310 169-320 (364)
196 1eye_A DHPS 1, dihydropteroate 90.6 0.87 3E-05 44.1 8.9 82 227-315 21-109 (280)
197 3na8_A Putative dihydrodipicol 90.5 1 3.5E-05 44.2 9.5 85 228-314 39-127 (315)
198 4ay7_A Methylcobalamin\: coenz 90.4 1.7 5.9E-05 42.8 11.2 72 234-312 190-268 (348)
199 2a4a_A Deoxyribose-phosphate a 90.4 9.1 0.00031 37.0 15.9 109 223-335 96-211 (281)
200 1qwg_A PSL synthase;, (2R)-pho 90.4 2.2 7.7E-05 40.5 11.3 142 176-335 38-196 (251)
201 1vs1_A 3-deoxy-7-phosphoheptul 90.2 13 0.00045 35.6 17.0 177 98-314 49-245 (276)
202 3gr7_A NADPH dehydrogenase; fl 90.2 3.1 0.0001 41.2 12.8 132 172-310 153-304 (340)
203 2qiw_A PEP phosphonomutase; st 90.2 2.2 7.6E-05 40.6 11.3 129 174-310 38-185 (255)
204 3pm6_A Putative fructose-bisph 90.1 14 0.00047 36.1 17.0 195 89-312 24-250 (306)
205 1z41_A YQJM, probable NADH-dep 90.1 4.8 0.00016 39.6 14.1 136 168-311 149-305 (338)
206 3b0p_A TRNA-dihydrouridine syn 90.1 7.5 0.00026 38.4 15.6 140 161-311 68-223 (350)
207 1aj0_A DHPS, dihydropteroate s 90.0 1.2 4.2E-05 43.1 9.5 80 227-315 30-119 (282)
208 2yxg_A DHDPS, dihydrodipicolin 90.0 14 0.00048 35.4 23.0 191 98-334 18-217 (289)
209 3m6y_A 4-hydroxy-2-oxoglutarat 89.9 0.73 2.5E-05 43.7 7.4 162 98-276 70-271 (275)
210 1f76_A Dihydroorotate dehydrog 89.9 15 0.00051 35.7 18.7 76 231-311 222-316 (336)
211 2gou_A Oxidoreductase, FMN-bin 89.8 2.8 9.6E-05 41.9 12.3 129 171-310 169-319 (365)
212 2y88_A Phosphoribosyl isomeras 89.7 0.87 3E-05 42.2 8.0 169 102-310 32-222 (244)
213 3dz1_A Dihydrodipicolinate syn 89.6 5.3 0.00018 38.9 13.9 71 204-278 89-164 (313)
214 1p1x_A Deoxyribose-phosphate a 89.6 3.5 0.00012 39.4 12.1 199 96-320 23-239 (260)
215 1vyr_A Pentaerythritol tetrani 89.6 3 0.0001 41.7 12.2 80 234-316 161-274 (364)
216 1zco_A 2-dehydro-3-deoxyphosph 89.5 14 0.00046 35.2 16.3 176 97-314 33-230 (262)
217 3cqj_A L-ribulose-5-phosphate 89.5 14 0.00047 34.6 20.9 210 74-338 13-255 (295)
218 1tz9_A Mannonate dehydratase; 89.4 17 0.00058 35.6 18.8 116 199-338 193-320 (367)
219 2a4a_A Deoxyribose-phosphate a 89.4 8.5 0.00029 37.2 14.8 220 80-327 33-273 (281)
220 1oy0_A Ketopantoate hydroxymet 89.3 3.9 0.00014 39.5 12.3 139 104-277 44-214 (281)
221 2r14_A Morphinone reductase; H 89.3 2 6.8E-05 43.2 10.8 131 172-310 175-325 (377)
222 2ekc_A AQ_1548, tryptophan syn 89.3 15 0.0005 34.7 20.7 177 161-356 29-224 (262)
223 2vp8_A Dihydropteroate synthas 89.2 1.2 4.2E-05 43.9 8.8 81 227-315 57-146 (318)
224 3e96_A Dihydrodipicolinate syn 89.2 17 0.00059 35.3 19.4 195 97-335 29-229 (316)
225 2ze3_A DFA0005; organic waste 89.1 11 0.00037 36.3 15.4 200 107-336 29-253 (275)
226 1zlp_A PSR132, petal death pro 89.1 3.1 0.0001 41.0 11.6 131 173-312 56-208 (318)
227 3m47_A Orotidine 5'-phosphate 89.1 3.2 0.00011 38.7 11.3 173 99-311 23-200 (228)
228 1o66_A 3-methyl-2-oxobutanoate 89.0 8.3 0.00029 37.1 14.4 137 105-277 28-196 (275)
229 3q94_A Fructose-bisphosphate a 89.0 8.4 0.00029 37.3 14.5 143 207-360 10-205 (288)
230 1y0e_A Putative N-acetylmannos 89.0 13 0.00044 33.6 18.7 177 81-312 7-203 (223)
231 3hgj_A Chromate reductase; TIM 89.0 6.9 0.00024 38.7 14.3 134 170-310 159-315 (349)
232 3i4e_A Isocitrate lyase; struc 88.9 16 0.00053 37.5 17.0 199 164-382 168-409 (439)
233 1tx2_A DHPS, dihydropteroate s 88.8 1.4 4.7E-05 43.1 8.8 80 227-315 55-144 (297)
234 2yx0_A Radical SAM enzyme; pre 88.7 13 0.00043 36.2 16.0 108 169-278 185-308 (342)
235 3b8i_A PA4872 oxaloacetate dec 88.7 3.4 0.00012 40.1 11.5 182 107-315 34-236 (287)
236 1f8m_A Isocitrate lyase, ICL; 88.7 23 0.00079 36.2 19.6 201 163-381 163-404 (429)
237 2p10_A MLL9387 protein; putati 88.6 5 0.00017 38.8 12.4 155 131-310 79-256 (286)
238 3m5v_A DHDPS, dihydrodipicolin 88.5 2.2 7.6E-05 41.4 10.1 86 228-314 22-111 (301)
239 2wkj_A N-acetylneuraminate lya 88.4 19 0.00064 34.8 21.6 193 97-334 28-229 (303)
240 3mcm_A 2-amino-4-hydroxy-6-hyd 88.4 5.2 0.00018 41.2 13.1 149 80-259 194-371 (442)
241 3q58_A N-acetylmannosamine-6-p 88.3 1.8 6E-05 40.5 9.0 67 240-317 94-160 (229)
242 2hjp_A Phosphonopyruvate hydro 88.2 9.2 0.00031 37.0 14.3 131 175-311 34-184 (290)
243 2zds_A Putative DNA-binding pr 88.2 1.8 6E-05 41.7 9.3 153 165-338 113-288 (340)
244 1vs1_A 3-deoxy-7-phosphoheptul 88.2 2.2 7.6E-05 41.1 9.8 156 100-275 88-273 (276)
245 2qiw_A PEP phosphonomutase; st 88.2 6.6 0.00022 37.3 13.0 146 106-270 32-201 (255)
246 2tps_A Protein (thiamin phosph 88.1 4.7 0.00016 36.6 11.6 158 103-313 33-200 (227)
247 3sz8_A 2-dehydro-3-deoxyphosph 87.9 9 0.00031 37.1 13.9 181 98-315 31-245 (285)
248 1u83_A Phosphosulfolactate syn 87.9 0.54 1.9E-05 45.3 5.1 134 176-329 65-213 (276)
249 3rys_A Adenosine deaminase 1; 87.9 5.2 0.00018 39.6 12.6 158 161-337 75-241 (343)
250 3ngj_A Deoxyribose-phosphate a 87.8 8.2 0.00028 36.4 13.2 104 230-337 91-198 (239)
251 3b8i_A PA4872 oxaloacetate dec 87.6 6.3 0.00022 38.1 12.7 109 197-311 65-186 (287)
252 1gte_A Dihydropyrimidine dehyd 87.6 12 0.0004 42.4 16.8 141 160-313 645-816 (1025)
253 2w6r_A Imidazole glycerol phos 87.5 1.6 5.6E-05 40.9 8.3 197 102-336 31-249 (266)
254 3gg8_A Pyruvate kinase; malari 87.4 30 0.001 36.1 18.9 159 97-275 204-369 (511)
255 3g8r_A Probable spore coat pol 87.3 9.9 0.00034 37.9 14.1 140 108-275 105-255 (350)
256 1ep3_A Dihydroorotate dehydrog 87.3 3.7 0.00013 39.4 10.9 78 232-314 109-197 (311)
257 3fkr_A L-2-keto-3-deoxyarabona 87.2 11 0.00039 36.5 14.4 70 204-278 90-166 (309)
258 2c6q_A GMP reductase 2; TIM ba 87.2 2.1 7.2E-05 42.6 9.3 70 238-316 121-192 (351)
259 3igs_A N-acetylmannosamine-6-p 87.1 3 0.0001 38.9 9.8 67 240-317 94-160 (232)
260 1o66_A 3-methyl-2-oxobutanoate 87.1 5.3 0.00018 38.5 11.6 98 173-288 34-138 (275)
261 3fs2_A 2-dehydro-3-deoxyphosph 87.0 3.6 0.00012 40.1 10.5 127 129-275 144-291 (298)
262 3cyv_A URO-D, UPD, uroporphyri 86.9 7.1 0.00024 38.3 13.0 73 236-312 189-269 (354)
263 3nvt_A 3-deoxy-D-arabino-heptu 86.9 2.1 7.3E-05 43.3 9.2 157 98-276 190-378 (385)
264 1ypf_A GMP reductase; GUAC, pu 86.9 7.4 0.00025 38.2 13.0 93 208-315 85-179 (336)
265 1mzh_A Deoxyribose-phosphate a 86.9 7.8 0.00027 35.8 12.5 189 82-310 7-201 (225)
266 2h9a_A Carbon monoxide dehydro 86.8 21 0.00072 36.6 16.7 157 115-310 128-290 (445)
267 1q7z_A 5-methyltetrahydrofolat 86.8 11 0.00039 39.8 15.1 154 83-273 322-493 (566)
268 3zwt_A Dihydroorotate dehydrog 86.8 9.3 0.00032 38.2 13.8 140 162-313 163-327 (367)
269 4h3d_A 3-dehydroquinate dehydr 86.6 22 0.00074 33.6 17.5 227 76-336 4-253 (258)
270 1nvm_A HOA, 4-hydroxy-2-oxoval 86.6 6.9 0.00024 38.6 12.6 41 180-224 9-50 (345)
271 3r2g_A Inosine 5'-monophosphat 86.5 2 6.7E-05 43.1 8.6 71 234-315 99-171 (361)
272 1f6y_A 5-methyltetrahydrofolat 86.5 22 0.00076 33.6 17.7 164 97-290 21-199 (262)
273 3lmz_A Putative sugar isomeras 86.5 4.9 0.00017 37.1 11.0 106 163-290 30-135 (257)
274 4gj1_A 1-(5-phosphoribosyl)-5- 86.5 2.2 7.6E-05 40.1 8.5 191 103-333 33-241 (243)
275 3fa4_A 2,3-dimethylmalate lyas 86.4 7 0.00024 38.2 12.2 109 197-310 62-187 (302)
276 2pgw_A Muconate cycloisomerase 86.3 4.6 0.00016 40.2 11.4 99 97-225 200-299 (384)
277 1yxy_A Putative N-acetylmannos 86.3 5.9 0.0002 36.3 11.3 72 238-318 92-165 (234)
278 3cny_A Inositol catabolism pro 86.3 2.8 9.7E-05 39.3 9.3 210 96-338 29-266 (301)
279 1f6k_A N-acetylneuraminate lya 86.3 24 0.00082 33.8 22.7 192 97-334 20-221 (293)
280 2qkf_A 3-deoxy-D-manno-octulos 86.2 5.4 0.00018 38.5 11.3 123 129-274 118-266 (280)
281 4ab4_A Xenobiotic reductase B; 86.1 4.2 0.00014 40.7 10.8 126 171-310 161-305 (362)
282 1p1x_A Deoxyribose-phosphate a 86.0 13 0.00046 35.3 13.8 108 224-335 76-189 (260)
283 2r91_A 2-keto-3-deoxy-(6-phosp 86.0 11 0.00037 36.2 13.4 64 204-267 77-145 (286)
284 4fo4_A Inosine 5'-monophosphat 86.0 5.8 0.0002 39.7 11.8 68 236-312 109-176 (366)
285 3vav_A 3-methyl-2-oxobutanoate 86.0 3.4 0.00012 39.8 9.6 100 173-290 46-151 (275)
286 3p6l_A Sugar phosphate isomera 85.8 9 0.00031 35.2 12.4 113 163-291 22-138 (262)
287 3noy_A 4-hydroxy-3-methylbut-2 85.7 3.2 0.00011 41.5 9.4 89 229-337 41-133 (366)
288 2qgq_A Protein TM_1862; alpha- 85.7 14 0.00049 35.3 14.2 145 96-253 31-190 (304)
289 1q7z_A 5-methyltetrahydrofolat 85.5 40 0.0014 35.6 21.6 207 98-334 119-380 (566)
290 1s2w_A Phosphoenolpyruvate pho 85.5 8.4 0.00029 37.4 12.3 110 197-312 62-189 (295)
291 4eiv_A Deoxyribose-phosphate a 85.5 11 0.00038 36.6 12.9 110 223-336 90-206 (297)
292 3inp_A D-ribulose-phosphate 3- 85.4 2.4 8.1E-05 40.2 8.1 163 105-310 44-220 (246)
293 3khd_A Pyruvate kinase; malari 85.4 31 0.0011 36.1 17.2 158 97-274 213-377 (520)
294 1xm3_A Thiazole biosynthesis p 85.2 3.1 0.00011 39.6 9.0 166 107-311 29-205 (264)
295 2y5s_A DHPS, dihydropteroate s 85.0 3.5 0.00012 40.1 9.3 82 227-315 38-126 (294)
296 3aty_A Tcoye, prostaglandin F2 84.9 9 0.00031 38.4 12.6 131 168-310 179-333 (379)
297 1ps9_A 2,4-dienoyl-COA reducta 84.9 3.2 0.00011 44.6 9.9 111 201-314 78-249 (671)
298 3vav_A 3-methyl-2-oxobutanoate 84.9 14 0.00047 35.6 13.3 137 105-277 40-208 (275)
299 1m3u_A 3-methyl-2-oxobutanoate 84.8 7.9 0.00027 37.1 11.5 137 105-277 28-196 (264)
300 2nuw_A 2-keto-3-deoxygluconate 84.7 3.8 0.00013 39.5 9.4 84 228-315 14-100 (288)
301 1icp_A OPR1, 12-oxophytodienoa 84.7 5.1 0.00017 40.2 10.7 81 234-315 167-278 (376)
302 3i4k_A Muconate lactonizing en 84.7 6.8 0.00023 39.1 11.6 106 95-229 202-307 (383)
303 2ovl_A Putative racemase; stru 84.6 5.6 0.00019 39.4 10.9 100 97-225 201-300 (371)
304 3k13_A 5-methyltetrahydrofolat 84.6 12 0.00042 36.3 13.0 200 82-309 18-250 (300)
305 2r91_A 2-keto-3-deoxy-(6-phosp 84.5 5.3 0.00018 38.4 10.4 83 229-315 14-99 (286)
306 3l5l_A Xenobiotic reductase A; 84.5 4.6 0.00016 40.2 10.2 131 172-310 167-322 (363)
307 3lye_A Oxaloacetate acetyl hyd 84.5 14 0.00046 36.2 13.3 111 197-311 69-196 (307)
308 2r14_A Morphinone reductase; H 84.4 8.7 0.0003 38.5 12.3 81 234-315 166-277 (377)
309 3ndo_A Deoxyribose-phosphate a 84.3 5.1 0.00018 37.6 9.8 105 230-336 76-187 (231)
310 3gnh_A L-lysine, L-arginine ca 84.3 3.5 0.00012 40.3 9.2 71 231-311 164-245 (403)
311 3gka_A N-ethylmaleimide reduct 84.2 4.6 0.00016 40.3 10.1 127 170-310 168-313 (361)
312 3pao_A Adenosine deaminase; st 84.2 5.4 0.00019 39.2 10.4 158 161-337 72-238 (326)
313 4drs_A Pyruvate kinase; glycol 84.1 44 0.0015 35.0 19.6 166 97-275 212-384 (526)
314 1w3i_A EDA, 2-keto-3-deoxy glu 83.9 3.9 0.00013 39.5 9.2 84 228-315 14-100 (293)
315 3elf_A Fructose-bisphosphate a 83.7 20 0.00069 35.6 14.3 163 204-375 7-250 (349)
316 3khj_A Inosine-5-monophosphate 83.7 7.8 0.00027 38.6 11.5 96 197-313 78-173 (361)
317 2zad_A Muconate cycloisomerase 83.7 11 0.00036 36.9 12.4 99 97-226 192-293 (345)
318 2nx9_A Oxaloacetate decarboxyl 83.7 39 0.0013 34.8 17.0 141 162-312 29-177 (464)
319 3u0h_A Xylose isomerase domain 83.6 3.7 0.00013 38.0 8.6 200 98-338 16-243 (281)
320 3hgj_A Chromate reductase; TIM 83.5 7 0.00024 38.6 11.0 81 235-317 153-263 (349)
321 2nuw_A 2-keto-3-deoxygluconate 83.5 10 0.00034 36.5 11.8 65 204-268 78-147 (288)
322 1r30_A Biotin synthase; SAM ra 83.4 12 0.00041 36.8 12.8 124 197-336 99-235 (369)
323 1mzh_A Deoxyribose-phosphate a 83.3 17 0.00059 33.4 13.0 81 233-314 69-153 (225)
324 1icp_A OPR1, 12-oxophytodienoa 83.2 5.9 0.0002 39.7 10.4 135 168-310 172-327 (376)
325 1qop_A Tryptophan synthase alp 83.1 21 0.00072 33.6 13.9 191 163-382 31-240 (268)
326 1o60_A 2-dehydro-3-deoxyphosph 83.0 5.9 0.0002 38.4 10.0 141 129-290 121-290 (292)
327 3iix_A Biotin synthetase, puta 83.0 13 0.00046 35.8 12.8 67 197-270 84-150 (348)
328 3l49_A ABC sugar (ribose) tran 82.9 28 0.00097 31.8 14.6 199 97-318 18-224 (291)
329 4djd_D C/Fe-SP, corrinoid/iron 82.8 8.8 0.0003 37.8 11.2 138 102-274 81-236 (323)
330 3i65_A Dihydroorotate dehydrog 82.8 20 0.00067 36.5 14.1 141 162-314 198-375 (415)
331 1lt8_A Betaine-homocysteine me 82.6 33 0.0011 34.7 15.7 163 169-366 145-320 (406)
332 3ih1_A Methylisocitrate lyase; 82.5 12 0.00042 36.5 12.0 202 106-337 41-265 (305)
333 3tml_A 2-dehydro-3-deoxyphosph 82.2 20 0.00067 34.7 13.2 179 98-315 28-246 (288)
334 1ps9_A 2,4-dienoyl-COA reducta 81.9 9.7 0.00033 40.7 12.2 135 169-311 147-308 (671)
335 3l6u_A ABC-type sugar transpor 81.8 30 0.001 31.7 14.2 199 97-318 21-228 (293)
336 2hsa_B 12-oxophytodienoate red 81.7 24 0.00081 35.6 14.3 133 170-310 178-345 (402)
337 3tha_A Tryptophan synthase alp 81.6 9.3 0.00032 36.3 10.6 95 167-275 32-140 (252)
338 2gou_A Oxidoreductase, FMN-bin 81.6 8.1 0.00028 38.5 10.7 81 234-317 161-274 (365)
339 3nav_A Tryptophan synthase alp 81.6 24 0.00081 33.7 13.6 121 206-337 7-150 (271)
340 1olt_A Oxygen-independent copr 81.5 4 0.00014 41.8 8.7 84 168-253 155-239 (457)
341 1xg4_A Probable methylisocitra 81.5 11 0.00037 36.6 11.3 206 107-337 30-257 (295)
342 3q45_A Mandelate racemase/muco 81.4 43 0.0015 33.0 17.5 165 99-300 140-305 (368)
343 3f4w_A Putative hexulose 6 pho 81.4 29 0.00098 30.9 14.3 91 208-313 42-134 (211)
344 1rvk_A Isomerase/lactonizing e 81.3 8.4 0.00029 38.2 10.8 99 97-225 210-310 (382)
345 3g1w_A Sugar ABC transporter; 81.2 26 0.00088 32.4 13.6 202 97-318 17-221 (305)
346 2eja_A URO-D, UPD, uroporphyri 81.2 3.4 0.00011 40.4 7.6 82 235-333 180-271 (338)
347 2hjp_A Phosphonopyruvate hydro 80.9 34 0.0012 33.0 14.5 205 107-337 28-257 (290)
348 3gr7_A NADPH dehydrogenase; fl 80.9 14 0.00046 36.4 11.9 111 201-316 80-252 (340)
349 1z41_A YQJM, probable NADH-dep 80.8 12 0.00041 36.7 11.5 111 200-315 79-251 (338)
350 3hqn_D Pyruvate kinase, PK; TI 80.8 57 0.002 33.9 20.0 156 98-274 190-352 (499)
351 2qgy_A Enolase from the enviro 80.7 4.8 0.00016 40.3 8.7 103 95-226 202-304 (391)
352 2z6i_A Trans-2-enoyl-ACP reduc 80.6 15 0.00051 35.8 12.1 161 104-313 26-191 (332)
353 4gxw_A Adenosine deaminase; am 80.5 32 0.0011 34.4 14.7 161 161-337 90-259 (380)
354 3gd6_A Muconate cycloisomerase 80.5 39 0.0013 33.6 15.4 164 98-300 141-308 (391)
355 3g8r_A Probable spore coat pol 80.3 5 0.00017 40.0 8.5 97 208-314 126-226 (350)
356 1ub3_A Aldolase protein; schif 80.2 31 0.0011 31.8 13.5 99 231-334 68-171 (220)
357 1eep_A Inosine 5'-monophosphat 80.2 4.1 0.00014 41.0 8.1 68 237-314 155-223 (404)
358 2qde_A Mandelate racemase/muco 80.2 8 0.00027 38.7 10.2 100 97-225 199-298 (397)
359 1dos_A Aldolase class II; lyas 80.0 50 0.0017 32.8 20.9 198 89-311 26-286 (358)
360 2qr6_A IMP dehydrogenase/GMP r 80.0 6.3 0.00021 39.5 9.3 98 206-318 144-244 (393)
361 1vrd_A Inosine-5'-monophosphat 79.9 4.5 0.00015 41.8 8.4 72 236-316 238-309 (494)
362 2vef_A Dihydropteroate synthas 79.6 6.1 0.00021 38.7 8.8 80 227-315 25-114 (314)
363 3jva_A Dipeptide epimerase; en 79.6 7.4 0.00025 38.4 9.6 106 95-229 191-297 (354)
364 3m9w_A D-xylose-binding peripl 79.6 24 0.0008 32.9 12.8 202 96-318 14-222 (313)
365 3iwp_A Copper homeostasis prot 79.5 33 0.0011 33.1 13.7 174 107-316 52-241 (287)
366 4h1z_A Enolase Q92ZS5; dehydra 79.4 49 0.0017 33.2 15.8 164 99-300 188-352 (412)
367 3q45_A Mandelate racemase/muco 79.4 8.3 0.00029 38.3 9.9 102 96-226 193-294 (368)
368 1nu5_A Chloromuconate cycloiso 79.3 10 0.00036 37.3 10.6 106 95-229 196-301 (370)
369 1mdl_A Mandelate racemase; iso 79.2 5.5 0.00019 39.2 8.5 99 97-225 199-298 (359)
370 4dwd_A Mandelate racemase/muco 79.0 8.1 0.00028 38.8 9.7 102 95-226 199-300 (393)
371 1q6o_A Humps, 3-keto-L-gulonat 78.9 35 0.0012 30.8 13.4 166 99-310 14-188 (216)
372 4fxs_A Inosine-5'-monophosphat 78.9 19 0.00066 37.3 12.8 132 101-254 230-363 (496)
373 2hmc_A AGR_L_411P, dihydrodipi 78.8 5.3 0.00018 39.6 8.2 99 228-334 41-143 (344)
374 1y0e_A Putative N-acetylmannos 78.6 6.2 0.00021 35.8 8.1 70 239-317 80-150 (223)
375 4ef8_A Dihydroorotate dehydrog 78.5 55 0.0019 32.4 18.1 190 104-313 61-306 (354)
376 2x7v_A Probable endonuclease 4 78.5 41 0.0014 30.9 14.7 123 164-292 13-149 (287)
377 3ru6_A Orotidine 5'-phosphate 78.4 51 0.0018 32.0 16.4 172 99-310 35-227 (303)
378 3obe_A Sugar phosphate isomera 78.4 12 0.00041 35.7 10.5 126 163-291 36-173 (305)
379 1r3s_A URO-D, uroporphyrinogen 78.2 3.8 0.00013 40.6 7.0 86 236-333 199-295 (367)
380 3usb_A Inosine-5'-monophosphat 78.2 11 0.00038 39.2 10.8 67 237-312 258-324 (511)
381 1tkk_A Similar to chloromucona 78.0 13 0.00043 36.7 10.7 106 95-229 193-300 (366)
382 3lg3_A Isocitrate lyase; conse 77.9 30 0.001 35.3 13.5 205 163-383 167-412 (435)
383 3vk5_A MOEO5; TIM barrel, tran 77.9 9.1 0.00031 37.0 9.2 59 226-289 45-104 (286)
384 3lg3_A Isocitrate lyase; conse 77.7 17 0.00058 37.2 11.6 53 221-274 155-219 (435)
385 2p10_A MLL9387 protein; putati 77.5 34 0.0012 33.0 13.0 149 106-274 113-280 (286)
386 3dgb_A Muconate cycloisomerase 77.3 12 0.0004 37.4 10.3 102 96-226 203-304 (382)
387 3qm3_A Fructose-bisphosphate a 77.3 18 0.00062 36.1 11.5 193 97-312 39-286 (357)
388 3l23_A Sugar phosphate isomera 77.3 13 0.00044 35.4 10.3 116 164-290 30-168 (303)
389 2hmc_A AGR_L_411P, dihydrodipi 77.3 58 0.002 32.0 18.7 195 97-335 43-247 (344)
390 3otr_A Enolase; structural gen 77.3 8.5 0.00029 39.6 9.3 136 97-267 280-418 (452)
391 3kjx_A Transcriptional regulat 77.2 31 0.0011 32.8 13.1 196 97-318 81-283 (344)
392 3ajx_A 3-hexulose-6-phosphate 77.2 39 0.0013 29.9 15.1 171 168-381 18-191 (207)
393 1wa3_A 2-keto-3-deoxy-6-phosph 77.0 4 0.00014 36.6 6.2 69 231-310 19-87 (205)
394 3dg3_A Muconate cycloisomerase 77.0 10 0.00035 37.6 9.7 105 95-229 193-297 (367)
395 1twd_A Copper homeostasis prot 77.0 18 0.00061 34.4 10.8 163 87-289 60-254 (256)
396 2nql_A AGR_PAT_674P, isomerase 77.0 4.7 0.00016 40.3 7.3 116 95-240 216-331 (388)
397 3iar_A Adenosine deaminase; pu 76.9 19 0.00063 36.0 11.6 104 196-310 120-233 (367)
398 2rdx_A Mandelate racemase/muco 76.9 14 0.00049 36.5 10.8 103 95-229 197-299 (379)
399 3kws_A Putative sugar isomeras 76.9 21 0.00074 33.1 11.6 115 163-292 38-170 (287)
400 2f6u_A GGGPS, (S)-3-O-geranylg 76.8 48 0.0017 30.9 14.0 68 232-310 147-215 (234)
401 2nwr_A 2-dehydro-3-deoxyphosph 76.7 18 0.00061 34.6 10.9 122 129-274 107-252 (267)
402 3kru_A NADH:flavin oxidoreduct 76.6 17 0.00057 35.9 11.1 114 199-316 76-252 (343)
403 3tml_A 2-dehydro-3-deoxyphosph 76.5 7.3 0.00025 37.8 8.2 114 152-275 133-273 (288)
404 1qo2_A Molecule: N-((5-phospho 76.4 15 0.0005 33.8 10.1 161 101-305 30-209 (241)
405 1r3s_A URO-D, uroporphyrinogen 76.4 40 0.0014 33.1 13.9 36 105-140 201-244 (367)
406 3gr4_A Pyruvate kinase isozyme 76.3 81 0.0028 33.2 18.8 156 98-274 240-402 (550)
407 4fxs_A Inosine-5'-monophosphat 76.3 7.3 0.00025 40.5 8.7 69 237-314 233-301 (496)
408 3c8f_A Pyruvate formate-lyase 76.2 42 0.0014 29.9 13.4 137 97-253 49-198 (245)
409 2g0w_A LMO2234 protein; putati 76.2 9.2 0.00031 36.1 8.8 211 77-338 22-252 (296)
410 1oy0_A Ketopantoate hydroxymet 76.2 14 0.00046 35.8 9.9 99 172-288 50-156 (281)
411 3l5l_A Xenobiotic reductase A; 76.0 13 0.00043 37.0 10.1 81 235-317 159-270 (363)
412 4avf_A Inosine-5'-monophosphat 76.0 7.3 0.00025 40.4 8.6 67 237-312 231-297 (490)
413 3kru_A NADH:flavin oxidoreduct 75.9 18 0.00062 35.7 11.1 131 172-310 152-304 (343)
414 2r8c_A Putative amidohydrolase 75.9 8.1 0.00028 38.2 8.7 70 232-311 173-253 (426)
415 4avf_A Inosine-5'-monophosphat 75.8 30 0.001 35.7 13.3 132 101-254 228-361 (490)
416 3oix_A Putative dihydroorotate 75.8 53 0.0018 32.4 14.4 141 160-313 138-304 (345)
417 3stp_A Galactonate dehydratase 75.7 8 0.00027 39.2 8.6 101 96-225 239-339 (412)
418 2og9_A Mandelate racemase/muco 75.3 7.1 0.00024 39.0 8.1 97 97-223 217-314 (393)
419 1gte_A Dihydropyrimidine dehyd 75.2 32 0.0011 38.8 14.3 78 231-312 645-734 (1025)
420 3n9r_A Fructose-bisphosphate a 75.2 12 0.0004 36.7 9.2 103 206-318 5-111 (307)
421 1rpx_A Protein (ribulose-phosp 75.1 34 0.0012 31.0 12.2 166 161-356 21-196 (230)
422 2a5h_A L-lysine 2,3-aminomutas 75.1 30 0.001 34.9 12.8 127 204-337 148-283 (416)
423 3t05_A Pyruvate kinase, PK; te 75.0 92 0.0031 33.2 18.9 219 97-336 190-434 (606)
424 1jcn_A Inosine monophosphate d 74.8 15 0.0005 38.2 10.6 70 236-314 256-325 (514)
425 1ydn_A Hydroxymethylglutaryl-C 74.8 9.5 0.00032 36.5 8.6 13 425-437 251-263 (295)
426 3gk0_A PNP synthase, pyridoxin 74.7 9.4 0.00032 36.6 8.2 126 103-253 55-182 (278)
427 3no5_A Uncharacterized protein 74.6 61 0.0021 31.0 14.1 138 99-269 123-272 (275)
428 1r0m_A N-acylamino acid racema 74.6 8.8 0.0003 38.0 8.5 99 97-225 199-297 (375)
429 2y88_A Phosphoribosyl isomeras 74.5 4.3 0.00015 37.4 5.8 70 236-312 33-102 (244)
430 3vkj_A Isopentenyl-diphosphate 74.4 5.2 0.00018 40.1 6.7 77 231-313 135-218 (368)
431 3sjn_A Mandelate racemase/muco 74.4 8.9 0.00031 38.1 8.5 101 96-225 202-303 (374)
432 1j93_A UROD, uroporphyrinogen 74.4 24 0.00082 34.4 11.6 36 105-140 197-240 (353)
433 3i6e_A Muconate cycloisomerase 74.3 9.3 0.00032 38.2 8.7 106 95-229 200-305 (385)
434 3r0u_A Enzyme of enolase super 74.2 72 0.0025 31.6 19.1 178 98-311 141-321 (379)
435 3ozy_A Putative mandelate race 74.2 72 0.0025 31.6 17.6 178 97-312 149-330 (389)
436 1xla_A D-xylose isomerase; iso 74.2 32 0.0011 34.1 12.6 52 164-217 117-172 (394)
437 1h5y_A HISF; histidine biosynt 73.9 14 0.00047 33.6 9.2 70 236-312 35-105 (253)
438 1n7k_A Deoxyribose-phosphate a 73.8 38 0.0013 31.6 12.2 146 161-331 34-184 (234)
439 1f6y_A 5-methyltetrahydrofolat 73.8 12 0.00042 35.5 9.0 91 232-337 23-116 (262)
440 1m3u_A 3-methyl-2-oxobutanoate 73.8 14 0.00047 35.4 9.2 97 174-288 35-137 (264)
441 2g0w_A LMO2234 protein; putati 73.7 19 0.00064 33.9 10.3 115 163-290 36-157 (296)
442 4dye_A Isomerase; enolase fami 73.6 24 0.00082 35.4 11.5 104 95-229 220-323 (398)
443 2gl5_A Putative dehydratase pr 73.5 8.8 0.0003 38.5 8.3 103 95-226 226-328 (410)
444 3toy_A Mandelate racemase/muco 73.5 13 0.00046 37.1 9.6 103 95-226 221-323 (383)
445 3my9_A Muconate cycloisomerase 73.4 8.5 0.00029 38.3 8.1 106 95-229 199-304 (377)
446 3v3w_A Starvation sensing prot 73.1 11 0.00039 38.2 9.0 101 96-225 235-335 (424)
447 1sjd_A N-acylamino acid racema 73.1 10 0.00034 37.4 8.5 99 97-225 193-291 (368)
448 3ik4_A Mandelate racemase/muco 73.0 19 0.00064 35.6 10.5 119 95-243 195-315 (365)
449 4exq_A UPD, URO-D, uroporphyri 72.9 5 0.00017 40.0 6.2 87 235-333 198-292 (368)
450 2pgw_A Muconate cycloisomerase 72.9 75 0.0026 31.2 17.3 163 99-299 147-310 (384)
451 1muw_A Xylose isomerase; atomi 72.9 46 0.0016 32.8 13.4 144 99-257 34-218 (386)
452 1ujp_A Tryptophan synthase alp 72.9 65 0.0022 30.5 14.6 167 168-355 35-219 (271)
453 1vzw_A Phosphoribosyl isomeras 72.9 4.4 0.00015 37.4 5.5 68 236-312 34-103 (244)
454 3ugv_A Enolase; enzyme functio 72.7 11 0.00037 37.8 8.7 101 96-225 228-328 (390)
455 3go2_A Putative L-alanine-DL-g 72.7 14 0.00048 37.2 9.6 98 96-225 222-319 (409)
456 1thf_D HISF protein; thermophI 72.5 14 0.00046 34.1 8.8 70 236-312 32-102 (253)
457 4dpp_A DHDPS 2, dihydrodipicol 72.5 36 0.0012 33.8 12.4 65 204-268 141-207 (360)
458 3gd6_A Muconate cycloisomerase 72.5 24 0.00081 35.3 11.1 100 96-226 196-297 (391)
459 2qde_A Mandelate racemase/muco 72.4 79 0.0027 31.3 16.4 165 99-300 145-310 (397)
460 2j6v_A UV endonuclease, UVDE; 72.3 58 0.002 31.2 13.6 107 200-313 138-254 (301)
461 2inf_A URO-D, UPD, uroporphyri 72.3 6.6 0.00023 38.7 6.9 72 236-312 195-271 (359)
462 3mwc_A Mandelate racemase/muco 72.1 12 0.00042 37.6 8.9 105 95-229 213-317 (400)
463 1ep3_A Dihydroorotate dehydrog 72.1 21 0.00071 33.9 10.3 133 161-312 109-269 (311)
464 3ixl_A Amdase, arylmalonate de 72.0 60 0.0021 30.0 13.2 122 104-257 56-190 (240)
465 2zc8_A N-acylamino acid racema 72.0 11 0.00037 37.2 8.4 99 97-225 192-290 (369)
466 1geq_A Tryptophan synthase alp 72.0 40 0.0014 30.8 11.9 95 232-337 17-133 (248)
467 3mkc_A Racemase; metabolic pro 71.9 11 0.00038 37.7 8.6 101 96-225 214-315 (394)
468 3fcp_A L-Ala-D/L-Glu epimerase 71.9 15 0.0005 36.6 9.4 106 95-229 201-306 (381)
469 3r4e_A Mandelate racemase/muco 71.9 10 0.00036 38.3 8.4 101 96-225 229-329 (418)
470 3o1i_D Periplasmic protein TOR 71.8 17 0.00057 33.6 9.3 195 98-317 19-226 (304)
471 2dqw_A Dihydropteroate synthas 71.7 5 0.00017 39.1 5.6 82 227-315 44-132 (294)
472 3dx5_A Uncharacterized protein 71.7 59 0.002 29.8 13.2 75 198-273 78-163 (286)
473 2dri_A D-ribose-binding protei 71.7 48 0.0016 30.0 12.4 198 97-318 14-215 (271)
474 2pp0_A L-talarate/galactarate 71.7 9.6 0.00033 38.2 8.0 98 97-223 230-327 (398)
475 4hb7_A Dihydropteroate synthas 71.6 18 0.00063 34.6 9.5 84 227-317 22-112 (270)
476 2h3h_A Sugar ABC transporter, 71.5 65 0.0022 29.9 14.9 199 98-318 14-216 (313)
477 3rcy_A Mandelate racemase/muco 71.3 13 0.00044 37.9 8.9 102 95-225 211-312 (433)
478 2o56_A Putative mandelate race 71.2 12 0.00041 37.5 8.6 103 95-226 223-325 (407)
479 1viz_A PCRB protein homolog; s 71.2 43 0.0015 31.3 11.9 68 232-310 140-207 (240)
480 2zvr_A Uncharacterized protein 71.2 26 0.0009 32.5 10.6 112 162-291 40-173 (290)
481 1gvf_A Tagatose-bisphosphate a 71.1 19 0.00065 34.7 9.6 99 207-316 7-109 (286)
482 3eol_A Isocitrate lyase; seatt 71.1 24 0.00081 36.1 10.7 56 218-275 146-213 (433)
483 3rr1_A GALD, putative D-galact 70.9 9.3 0.00032 38.6 7.7 103 95-226 186-288 (405)
484 3stp_A Galactonate dehydratase 70.9 90 0.0031 31.3 15.4 162 99-301 179-348 (412)
485 1m5w_A Pyridoxal phosphate bio 70.8 17 0.00059 34.2 8.9 126 103-253 27-154 (243)
486 2q02_A Putative cytoplasmic pr 70.8 61 0.0021 29.3 16.4 103 163-273 51-162 (272)
487 3r0u_A Enzyme of enolase super 70.7 18 0.00063 36.0 9.8 102 96-226 195-298 (379)
488 1rqb_A Transcarboxylase 5S sub 70.7 1.1E+02 0.0037 32.1 16.6 141 162-312 46-194 (539)
489 3feq_A Putative amidohydrolase 70.7 12 0.00041 36.6 8.4 70 232-311 170-250 (423)
490 2p8b_A Mandelate racemase/muco 70.6 11 0.00037 37.2 8.0 99 97-225 195-295 (369)
491 3b0p_A TRNA-dihydrouridine syn 70.5 22 0.00076 35.0 10.3 78 232-313 68-164 (350)
492 1vc4_A Indole-3-glycerol phosp 70.3 36 0.0012 31.9 11.3 111 102-253 66-180 (254)
493 3ble_A Citramalate synthase fr 70.2 15 0.00052 36.0 9.0 41 197-241 38-79 (337)
494 2p8b_A Mandelate racemase/muco 70.2 84 0.0029 30.6 16.4 165 99-299 141-306 (369)
495 3tj4_A Mandelate racemase; eno 69.9 10 0.00034 37.7 7.7 102 95-225 205-306 (372)
496 3vcn_A Mannonate dehydratase; 69.9 10 0.00034 38.6 7.8 101 96-225 236-336 (425)
497 4exq_A UPD, URO-D, uroporphyri 69.9 63 0.0022 31.9 13.5 144 102-275 198-358 (368)
498 1chr_A Chloromuconate cycloiso 69.7 9.5 0.00033 37.8 7.4 106 95-229 196-301 (370)
499 2hzg_A Mandelate racemase/muco 69.7 15 0.00051 36.7 9.0 105 95-229 201-308 (401)
500 3lab_A Putative KDPG (2-keto-3 69.7 11 0.00039 34.9 7.4 68 231-310 22-89 (217)
No 1
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=1.8e-92 Score=721.94 Aligned_cols=354 Identities=58% Similarity=0.826 Sum_probs=291.4
Q ss_pred CCCCCCCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCc
Q 013498 71 PNRIPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGY 150 (442)
Q Consensus 71 ~~~~~~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l 150 (442)
|.+..+|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||.++|+|+++++++++..++
T Consensus 4 ~~~~~~~~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~-------- 75 (370)
T 3rmj_A 4 PFTMTQTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITK-------- 75 (370)
T ss_dssp ------CCBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSS--------
T ss_pred CCCCCCCCCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCC--------
Confidence 334456788999999999999999999999999999999999999999999999999999999998875322
Q ss_pred cceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCC
Q 013498 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR 230 (442)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr 230 (442)
+.+++|+|++.+|+++++++++++|.++|++|+++||+|+++|+++|++|+++++.++|++|+++|.. |.|++||++|
T Consensus 76 -~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~ed~~r 153 (370)
T 3rmj_A 76 -STVCSLSRAIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDD-VEFSCEDALR 153 (370)
T ss_dssp -SEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSC-EEEEEETGGG
T ss_pred -CeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCE-EEEecCCCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999985 9999999999
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
++++|+.++++.+.++|+++|+||||+|+++|.+++++|+.+++++|+.++++|++|||||+|||+||+++|+++||++|
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~v 233 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQV 233 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999998544488999999999999999999999999999
Q ss_pred EecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhhhccCccccc
Q 013498 311 EVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDG 390 (442)
Q Consensus 311 d~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dg 390 (442)
|+|++|||||+||++||+|+++|+.+.. .+|+++++|+++|.++++++++++|+++++++|+||+|+|+|+|||||||
T Consensus 234 d~tv~GlGeraGN~~lE~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~aF~h~sGiH~d~ 311 (370)
T 3rmj_A 234 ECTVNGLGERAGNASVEEIVMALKVRHD--LFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDG 311 (370)
T ss_dssp EEBGGGCSSTTCBCBHHHHHHHHHHTHH--HHCCBCCCCGGGHHHHHHHHHHHHTCCCCSSCTTTSTTTTC---------
T ss_pred EEeccccCcccccccHHHHHHHHHhhhh--ccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHhcccccHHH
Confidence 9999999999999999999999986421 13789999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccccCCCccccceEEecccccHHHHHHHHHHcCCCcc
Q 013498 391 MLKHKGTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLKEVCQYVI 439 (442)
Q Consensus 391 ~lk~~~~Ye~~~Pe~iG~~r~~~~~i~lg~~SG~~~v~~~l~e~G~~~~ 439 (442)
++|||.+||||+||+||+.+. +|++|||||+++|+++|+|+||+++
T Consensus 312 i~k~~~~Ye~~~P~~vG~~~~---~i~~~~~sG~~~i~~~l~~~g~~~~ 357 (370)
T 3rmj_A 312 VLKHRETYEIMSAESVGWATN---RLSLGKLSGRNAFKTKLADLGIELE 357 (370)
T ss_dssp -----CCSCCCCHHHHTCC------------------------------
T ss_pred HHhCchhccccCHHHcCCCCc---eEeccCCCCHHHHHHHHHHcCCCCC
Confidence 999999999999999996332 5999999999999999999999987
No 2
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=8.5e-89 Score=702.61 Aligned_cols=351 Identities=29% Similarity=0.432 Sum_probs=310.1
Q ss_pred CCCCCCCC---CCCCCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhc
Q 013498 65 TRPEYIPN---RIPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVG 141 (442)
Q Consensus 65 ~~~~~~~~---~~~~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~ 141 (442)
++.+|-|+ ..+++++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.++|+|+++++.+++..
T Consensus 22 ~~~~~~~~~~~~~~~~~~V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~~- 100 (423)
T 3ivs_A 22 NGNPYGPNPSDFLSRVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLG- 100 (423)
T ss_dssp -------CGGGGGCCTTSCEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC-
T ss_pred CCCCCCCCccccccCCCcEEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHhcC-
Confidence 45566665 46678899999999999999999999999999999999999999999999999999999999987642
Q ss_pred ccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE
Q 013498 142 NAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV 221 (442)
Q Consensus 142 ~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V 221 (442)
+.+.+++|+|++.+|+++++++ |+++|++|+++||.|++++++++++++++++.++|++||++|+. |
T Consensus 101 --------~~~~v~~~~r~~~~di~~A~~a----G~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~-V 167 (423)
T 3ivs_A 101 --------LKCKILTHIRCHMDDARVAVET----GVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIE-V 167 (423)
T ss_dssp --------CSSEEEEEEESCHHHHHHHHHT----TCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCE-E
T ss_pred --------CCCEEEEeeccChhhHHHHHHc----CCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCE-E
Confidence 2356889999999999999885 89999999999999999999999999999999999999999984 9
Q ss_pred EEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH
Q 013498 222 EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA 301 (442)
Q Consensus 222 ~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANala 301 (442)
.|++||++|+|++++.++++.+.++|+++|+||||+|+++|.+++++|+.+++.++ ++|++|||||+|||+||+++
T Consensus 168 ~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~----~~i~~H~Hnd~GlAvAN~la 243 (423)
T 3ivs_A 168 RFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS----CDIECHFHNDTGMAIANAYC 243 (423)
T ss_dssp EEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS----SEEEEEEBCTTSCHHHHHHH
T ss_pred EEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC----CeEEEEECCCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999873 78999999999999999999
Q ss_pred HHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhh
Q 013498 302 GACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFA 381 (442)
Q Consensus 302 Al~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~ 381 (442)
|+++||++||+|++|||||+||++||+|+++|..... +++++++|++.|.++++++++++|+++|+|+||||+|+|+
T Consensus 244 Av~aGa~~vd~ti~GlGERaGNa~Le~vv~~L~~~~~---~~~~~~idl~~L~~is~~v~~~~~~~v~~~kpivG~~aFa 320 (423)
T 3ivs_A 244 ALEAGATHIDTSILGIGERNGITPLGALLARMYVTDR---EYITHKYKLNQLRELENLVADAVEVQIPFNNYITGMCAFT 320 (423)
T ss_dssp HHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHCH---HHHHHHSCGGGHHHHHHHHHHHTTCCCCTTCTTTSTTTTE
T ss_pred HHHhCCCEEEEecccccCcccchhHHHHHHHHHhhcc---cCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCchhHhHHH
Confidence 9999999999999999999999999999999875421 2567999999999999999999999999999999999999
Q ss_pred hccCccccccccCCCCCCCCCccccCCCccccceEEec-ccccHHHHHHHHHHcCCCccc
Q 013498 382 HESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLG-KLSGRHALKDRLKEVCQYVIF 440 (442)
Q Consensus 382 h~sGiH~dg~lk~~~~Ye~~~Pe~iG~~r~~~~~i~lg-~~SG~~~v~~~l~e~G~~~~~ 440 (442)
|+|||||||++|||.+||||+||+||++|. +++| ||||+++|+++|+|+||++++
T Consensus 321 h~sGiH~dgilk~~~tYe~~~Pe~vG~~r~----~~v~~k~SG~~~i~~~l~~lG~~l~~ 376 (423)
T 3ivs_A 321 HKAGIHAKAILANPSTYEILKPEDFGMSRY----VHVGSRLTGWNAIKSRAEQLNLHLTD 376 (423)
T ss_dssp EECSGGGGGSSSCGGGCCSSCGGGGTCCCC----EEESSCCCTHHHHHHHHHHTTCCC--
T ss_pred hhcchhHHHHhCCccccCCcCHHHcCCcce----EEeccccCCHHHHHHHHHHcCCCCCH
Confidence 999999999999999999999999999884 8885 999999999999999999875
No 3
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=1.4e-84 Score=695.68 Aligned_cols=350 Identities=27% Similarity=0.333 Sum_probs=317.8
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~ 156 (442)
.+.++|+|||||||+|+++..|+.++|++|+++|+++||++||+|||++++.|+++++.+++.... .. .+.+++
T Consensus 69 ~~~p~i~DtTLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~asp~D~e~v~~i~~~~l~--~~----~~~i~a 142 (644)
T 3hq1_A 69 DRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQGAI--PD----DVTIQV 142 (644)
T ss_dssp CSCCEEEECCCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECTTTCHHHHHHHHHHHHTTCS--CT----TCEEEE
T ss_pred CCCCEEEECCCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhcCCC--CC----CeEEEE
Confidence 356899999999999999999999999999999999999999999999999999999999886311 01 257899
Q ss_pred ecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC------eEEEccCCCCC
Q 013498 157 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD------DVEFSPEDAGR 230 (442)
Q Consensus 157 ~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~------~V~f~~edasr 230 (442)
|+|+++.||+++++++++++.++|++|+++||+|+++|+++|++|+++++.++++++++++.. .|.|++||++|
T Consensus 143 L~r~~~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasr 222 (644)
T 3hq1_A 143 LTQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTG 222 (644)
T ss_dssp EEESCHHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGG
T ss_pred EecCCHhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCC
Confidence 999999999999999999999999999999999999999999999999999999888877532 27899999999
Q ss_pred CCHHHHHHHHHHHHHc---CCc---EEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 231 SDRKFLYEILGEVIKV---GAT---TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~---Gad---~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
++++|+.++++.+.++ |++ .|+|+||+|+++|.+++++|+.+++++|..++++|++|||||+|||+||+++|++
T Consensus 223 td~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~ 302 (644)
T 3hq1_A 223 TELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFA 302 (644)
T ss_dssp SCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHH
Confidence 9999999999999986 577 8999999999999999999999999998655689999999999999999999999
Q ss_pred hCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhhhcc
Q 013498 305 AGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHES 384 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h~s 384 (442)
+||++||+|++|+|||+||++||+|+++|+.+ |+++++|+++|.++++++++++|+++++|+||||+++|+|+|
T Consensus 303 AGA~~Vdgti~G~GERaGNa~LE~lv~~L~~~------Gi~tgidl~~L~~is~~ve~~~g~~v~~~kpiVG~~aFah~S 376 (644)
T 3hq1_A 303 AGADRIEGCLFGNGERTGNVCLVTLGLNLFSR------GVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFS 376 (644)
T ss_dssp TTCCEEEEBGGGCSSTTCBCBHHHHHHHHHTT------TCCCSSCCTTHHHHHHHHHHHHSCCCCTTCTTTSTTTTEECC
T ss_pred hCCCEEEecCCCCCccccCccHHHHHHHHHhc------ccCCccCHHHHHHHHHHHHHHhCCCCCCCcccccccceeecc
Confidence 99999999999999999999999999999864 788999999999999999999999999999999999999999
Q ss_pred CccccccccCC--------------------CCCCCCCccccCCCccccceEEecccccHHHHHHHHH-HcCCCccc
Q 013498 385 GIHQDGMLKHK--------------------GTYEIISPEDIGLERSSEAGIVLGKLSGRHALKDRLK-EVCQYVIF 440 (442)
Q Consensus 385 GiH~dg~lk~~--------------------~~Ye~~~Pe~iG~~r~~~~~i~lg~~SG~~~v~~~l~-e~G~~~~~ 440 (442)
||||||++|++ .+||||+|++||++|. ..|++|+||||++|+++|+ ++||++++
T Consensus 377 GiHqdailK~~~~~~~~~~~~~~~~~~~~w~~tYe~idPe~VG~~~~--~vi~v~~~SGk~~v~~~l~~~lG~~l~~ 451 (644)
T 3hq1_A 377 GSHQDAINKGLDAMKLDADAADCDVDDMLWQVPYLPIDPRDVGRTYE--AVIRVNSQSGKGGVAYIMKTDHGLSLPR 451 (644)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGSCCCCTTCSSCGGGGTCCCE--ECC-------CCCHHHHHHHHHCCCCCH
T ss_pred cccHHHHhcCchhhhhhhhcccccccccccccccccCCHHHcCCcce--eEEeccCcCCHHHHHHHHHHhcCCCCCh
Confidence 99999999997 4899999999998863 3467899999999999999 79999874
No 4
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=1.1e-82 Score=653.38 Aligned_cols=337 Identities=27% Similarity=0.408 Sum_probs=289.6
Q ss_pred CceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee
Q 013498 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (442)
Q Consensus 78 ~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~ 157 (442)
++|+|+|||||||+|++++.|++++|++|++.|+++||+.||+|||+++|+++++++.+++.. +...+++|
T Consensus 2 ~~v~I~DtTLRDG~Q~~~~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~---------~~~~v~~~ 72 (382)
T 2ztj_A 2 REWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLG---------LKAKVVTH 72 (382)
T ss_dssp CCCEEEEEEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSC---------CSSEEEEE
T ss_pred CceEEEECCCCcccCCCCCCcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcC---------CCcEEEEE
Confidence 469999999999999999999999999999999999999999999999999999999987642 22468899
Q ss_pred cccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEccCCCCCCCHHH
Q 013498 158 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 158 ~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G--~~~V~f~~edasr~d~~~ 235 (442)
+|+..+||++++++ |++.|++|+++||.|++ ++++|++|+++++.++++++|+.| ++ |+|++||++|++++|
T Consensus 73 ~r~~~~di~~a~~~----g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~-v~~~~ed~~~~~~~~ 146 (382)
T 2ztj_A 73 IQCRLDAAKVAVET----GVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVE-VRFSAEDTFRSEEQD 146 (382)
T ss_dssp EESCHHHHHHHHHT----TCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTSE-EEEEETTTTTSCHHH
T ss_pred cccChhhHHHHHHc----CCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEE-EEEEEEeCCCCCHHH
Confidence 99999999999875 89999999999999999 999999999999999999999999 84 999999999999999
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhC-CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~-p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
+.++++.+.++ +++|+||||+|+++|.+++++|+.+++.+ + +++|++|||||+|||+||+++|+++||++||+|+
T Consensus 147 ~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~---~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv 222 (382)
T 2ztj_A 147 LLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGP---RVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTI 222 (382)
T ss_dssp HHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTT---TSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCC---CCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEcc
Confidence 99999999999 99999999999999999999999999975 4 3789999999999999999999999999999999
Q ss_pred cccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhhhccCccccccccC
Q 013498 315 NGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKH 394 (442)
Q Consensus 315 ~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dg~lk~ 394 (442)
+|||||+||++||+|+++|+.+.. +|+++++|+++|.++++++++++|+++++++|++|.++|+|+||||+||++||
T Consensus 223 ~GlGeraGN~~lE~vv~~L~~~~~---~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~p~vG~~~f~h~sGiH~~g~~k~ 299 (382)
T 2ztj_A 223 LGIGERNGITPLGGFLARMYTLQP---EYVRRKYKLEMLPELDRMVARMVGVEIPFNNYITGETAFSHKAGMHLKAIYIN 299 (382)
T ss_dssp GGCSSTTCBCBHHHHHHHHHHHCH---HHHHHHSCGGGHHHHHHHHHHHHTCCCCTTCTTTSTTTTEECCHHHHHHHHHC
T ss_pred ccccccccchhHHHHHHHHHhhcC---CcccCCCCHHHHHHHHHHHHHHhCCCCCcCCCcCCcchhheecccCCchhhcC
Confidence 999999999999999999986521 14779999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCccccceEEec-ccccHHHHHHHHHHcCCCccc
Q 013498 395 KGTYEIISPEDIGLERSSEAGIVLG-KLSGRHALKDRLKEVCQYVIF 440 (442)
Q Consensus 395 ~~~Ye~~~Pe~iG~~r~~~~~i~lg-~~SG~~~v~~~l~e~G~~~~~ 440 (442)
|.+||+++|++||+.|. ++++ ++||+++|.++|+++||++++
T Consensus 300 ~~~Ye~~~P~~vG~~~~----v~~~s~~sG~~av~~~l~~~g~~~~~ 342 (382)
T 2ztj_A 300 PEAYEPYPPEVFGVKRK----LIIASRLTGRHAIKARAEELGLHYGE 342 (382)
T ss_dssp GGGGCSSCGGGGTCCCE----ECCC----------------------
T ss_pred hhhhcccCHHHcCCccE----EEecccchhHHHHHHHHHHhCCCCCH
Confidence 99999999999999873 7776 579999999999999998764
No 5
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.4e-80 Score=624.94 Aligned_cols=316 Identities=53% Similarity=0.823 Sum_probs=252.6
Q ss_pred CCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEe
Q 013498 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVIC 155 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~ 155 (442)
.|++|+|+|||||||+|+++..|++++|++|++.|+++||+.||+|||.++|+|+++++.+++..++ +.++
T Consensus 3 ~~~~v~I~DttlRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~ 73 (325)
T 3eeg_A 3 LGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTR---------PTIC 73 (325)
T ss_dssp -CEECEEEECGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCS---------SEEE
T ss_pred CCCceEEEECCCCCcccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCC---------CEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999886432 4789
Q ss_pred eecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHH
Q 013498 156 GLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 156 ~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~ 235 (442)
+|+|++++|+++++++++++|+++|++|+++||+|+++|+++|++|+++++.++++++|+.|. .|.|++||++|+++++
T Consensus 74 ~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~-~v~f~~~d~~~~~~~~ 152 (325)
T 3eeg_A 74 ALTRAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVH-EVEFFCEDAGRADQAF 152 (325)
T ss_dssp EECCSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSS-EEEEEEETGGGSCHHH
T ss_pred EeecCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEEEccccccchHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 4999999999999999
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
+.++++.+.++|+++|+|+||+|.++|.+++++|+.+++++|+.++++|++|+|||+|||+||+++|+++||++||+|++
T Consensus 153 ~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~ 232 (325)
T 3eeg_A 153 LARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTIN 232 (325)
T ss_dssp HHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGG
T ss_pred HHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecc
Confidence 99999999999999999999999999999999999999999854458999999999999999999999999999999999
Q ss_pred ccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhhhccCccccccccCC
Q 013498 316 GIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHK 395 (442)
Q Consensus 316 GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dg~lk~~ 395 (442)
|||||+||++||+|+++|+.+.. .+|+++++|+++|.++++++++++|+++++++|+||.++|+|+|||||||++|||
T Consensus 233 GlGer~GN~~lE~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~p~vG~~af~h~sGiH~~~~~k~~ 310 (325)
T 3eeg_A 233 GIGERAGNTALEEVVMAMECHKE--TLGLETGINHKKLVPISHLVSTLMRMQVQSNKAIVGRNAFAHSSGIHQDGFLKHR 310 (325)
T ss_dssp GCCSTTCCCBHHHHHHHHHHTHH--HHCEECCCCGGGHHHHHHHHHHHTTC-----------------------------
T ss_pred cccccccchhHHHHHHHHHhhhh--ccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHhccccHHHHhcCh
Confidence 99999999999999999986421 1378899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 013498 396 GTYEIISP 403 (442)
Q Consensus 396 ~~Ye~~~P 403 (442)
.+||||+-
T Consensus 311 ~~ye~~~~ 318 (325)
T 3eeg_A 311 ETYEIIDE 318 (325)
T ss_dssp --------
T ss_pred hhcCCCCC
Confidence 99999953
No 6
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=8.9e-78 Score=607.66 Aligned_cols=318 Identities=29% Similarity=0.421 Sum_probs=283.3
Q ss_pred CCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHH-HHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceE
Q 013498 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIAR-QLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI 154 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~-~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i 154 (442)
.|++|+|+|||||||+|++++.|++++|++|++ .|+++||+.||+|+|.++|+||++++++++.... +.. .-...+
T Consensus 16 ~~~~v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~-~~~--~~~~~i 92 (337)
T 3ble_A 16 VETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAAT-EQL--TERIEI 92 (337)
T ss_dssp ---CCEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHH-TTC--GGGEEE
T ss_pred CCCceEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhh-hcc--CCCCeE
Confidence 456799999999999999999999999999999 9999999999999999899999999999884210 000 001468
Q ss_pred eeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC---CCCC
Q 013498 155 CGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGRS 231 (442)
Q Consensus 155 ~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed---asr~ 231 (442)
++|+|+.+ |+++++++ |++.|++|+++||.|+++++++|++|+++++.++++++|++|++ |.|++++ .+|+
T Consensus 93 ~~l~~~~~-~i~~a~~~----g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~-v~~~~~~~~~~~~~ 166 (337)
T 3ble_A 93 LGFVDGNK-TVDWIKDS----GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK-INVYLEDWSNGFRN 166 (337)
T ss_dssp EEESSTTH-HHHHHHHH----TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE-EEEEEETHHHHHHH
T ss_pred EEEccchh-hHHHHHHC----CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEEEECCCCCcC
Confidence 89999766 99999887 89999999999999999999999999999999999999999985 9999999 9999
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
+++++.++++.+.++|+++|+|+||+|.++|.+++++|+.+++++|+ ++|++|+|||+|||+||+++|+++||++||
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~---~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd 243 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPD---IHFEFHGHNDYDLSVANSLQAIRAGVKGLH 243 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTT---SCEEEECBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCC---CeEEEEecCCcchHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999999999999999999999974 789999999999999999999999999999
Q ss_pred ecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhhhccCcccccc
Q 013498 312 VTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGM 391 (442)
Q Consensus 312 ~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dg~ 391 (442)
+|++|||||+||++||+|+++|+.+ +|+++++|+++|.++++++++++|+++++++|++|.++|+|+||||+||+
T Consensus 244 ~tv~GlG~~aGN~~~E~lv~~L~~~-----~g~~tgidl~~L~~~~~~v~~~~~~~~~~~~~~vg~~~f~h~~GiH~~g~ 318 (337)
T 3ble_A 244 ASINGLGERAGNTPLEALVTTIHDK-----SNSKTNINEIAITEASRLVEVFSGKRISANRPIVGEDVFTQTAGVHADGD 318 (337)
T ss_dssp EBGGGCSSTTCBCBHHHHHHHHHHH-----SSCCCCCCGGGHHHHHHHHHHHHCCCCCTTCTTTSTTTTCC---------
T ss_pred EecccccccccchhHHHHHHHHHHh-----cCCCCCcCHHHHHHHHHHHHHHHCCCCCCCccchhhhhhheecccCcCce
Confidence 9999999999999999999999976 37889999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCccccCCCc
Q 013498 392 LKHKGTYEIISPEDIGLER 410 (442)
Q Consensus 392 lk~~~~Ye~~~Pe~iG~~r 410 (442)
+|||.+||||+||+||++|
T Consensus 319 ~k~~~~ye~~~P~~vG~~~ 337 (337)
T 3ble_A 319 KKGNLYANPILPERFGRKR 337 (337)
T ss_dssp ---CTTCCSCCGGGGTCCC
T ss_pred eCCccccCCCChHHcCCCC
Confidence 9999999999999999875
No 7
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=3e-67 Score=521.12 Aligned_cols=284 Identities=47% Similarity=0.740 Sum_probs=254.6
Q ss_pred CceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee
Q 013498 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (442)
Q Consensus 78 ~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~ 157 (442)
++|+|+|||||||+|++++.|++++|++|++.|+++||+.||+|||.++|+|++.++.+++..++ +.+++|
T Consensus 4 ~~v~I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~---------~~i~~l 74 (293)
T 3ewb_X 4 KKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKH---------CSVTGL 74 (293)
T ss_dssp EEEEEEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCS---------SEEEEE
T ss_pred CeeEEEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCC---------CEEEEE
Confidence 57999999999999999999999999999999999999999999999999999999999886432 478999
Q ss_pred cccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHH
Q 013498 158 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLY 237 (442)
Q Consensus 158 ~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~ 237 (442)
+|++++|+++++++++++|.++|++|+++||+|+++|+++|++|+++++.++++++|+.|.. |.|++||++|++++++.
T Consensus 75 ~~~~~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~~d~~~~~~~~~~ 153 (293)
T 3ewb_X 75 ARCVEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDV-VQFSPEDATRSDRAFLI 153 (293)
T ss_dssp EESSHHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSC-EEEEEETGGGSCHHHHH
T ss_pred ecCCHHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCE-EEEEeccCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999985 99999999999999999
Q ss_pred HHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccc
Q 013498 238 EILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
++++.+.++|+++|+|+||+|.++|.+++++|+.+++++|+.++++|++|+|||+|||+||+++|+++||++||+|++||
T Consensus 154 ~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~Gl 233 (293)
T 3ewb_X 154 EAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGI 233 (293)
T ss_dssp HHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGC
T ss_pred HHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecccc
Confidence 99999999999999999999999999999999999999986545889999999999999999999999999999999999
Q ss_pred ccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCc
Q 013498 318 GERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKA 373 (442)
Q Consensus 318 GeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~p 373 (442)
|||+||++||+|+++|+.+.. .+|++|++|+++|.++++++++++|+++++|+-
T Consensus 234 GeraGN~~~E~vv~~L~~~~~--~~g~~tgidl~~L~~~s~~v~~~~g~~~~~~~~ 287 (293)
T 3ewb_X 234 GERAGNTALEEVAVALHIRKD--FYQAETNIVLNQFKNSSDLISRLSGMPVPRNEG 287 (293)
T ss_dssp CTTTCBCBHHHHHHHHHHTHH--HHCEEECCCGGGHHHHHHHHHHC----------
T ss_pred ccccccHhHHHHHHHHHhhhh--hcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999986411 137899999999999999999999999999863
No 8
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=1.8e-61 Score=482.53 Aligned_cols=282 Identities=20% Similarity=0.303 Sum_probs=251.7
Q ss_pred CCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCC---h--hH-HHHHHHHHHHhcccccccCC
Q 013498 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---K--ED-FEAVRTIAKEVGNAVDAESG 149 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~---~--~d-~e~v~~l~~~~~~~~~~~~~ 149 (442)
+|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.+. | .| ++.++.+.+. +
T Consensus 3 ~~~~v~i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~-------- 73 (307)
T 1ydo_A 3 YPKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-K-------- 73 (307)
T ss_dssp CCSBCEEEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-T--------
T ss_pred CCCceEEEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-C--------
Confidence 457899999999999999999999999999999999999999999987543 3 23 2333322211 1
Q ss_pred ccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------E
Q 013498 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------F 223 (442)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~------f 223 (442)
...+.+|.+ +.+|+++++++ |++.|++|+++||.|+++|+++|++|+++++.++++++|++|++ |. |
T Consensus 74 -~~~~~~l~~-~~~~i~~a~~~----g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~-v~~~i~~~~ 146 (307)
T 1ydo_A 74 -GVTYAALVP-NQRGLENALEG----GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLT-TRAYLSTVF 146 (307)
T ss_dssp -TCEEEEECC-SHHHHHHHHHH----TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECTT
T ss_pred -CCeEEEEeC-CHHhHHHHHhC----CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE-EEEEEEEEe
Confidence 135677875 88999999987 89999999999999999999999999999999999999999985 74 7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH
Q 013498 224 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 303 (442)
Q Consensus 224 ~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl 303 (442)
++||.+|++++++.++++.+.++|+++|+|+||+|.++|.+++++|+.+++.+| +++|++|+|||+|||+||+++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~---~~~l~~H~Hnd~Gla~AN~laAv 223 (307)
T 1ydo_A 147 GCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP---ANQIALHFHDTRGTALANMVTAL 223 (307)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSC---GGGEEEECBGGGSCHHHHHHHHH
T ss_pred cCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEECCCCchHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999999999997 37899999999999999999999
Q ss_pred HhCCCEEEeccccccc------ccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccc
Q 013498 304 CAGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGA 377 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGe------raGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~ 377 (442)
++||++||+|++|||| |+||++||+|+++|+.. |+++++|+++|.++++++++++|++++++.|..|.
T Consensus 224 ~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~------g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~~~ 297 (307)
T 1ydo_A 224 QMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQM------DIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFK 297 (307)
T ss_dssp HHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHT------TCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHHHT
T ss_pred HhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhc------CCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHHHH
Confidence 9999999999999999 99999999999999875 78899999999999999999999999999998877
Q ss_pred hhhhh
Q 013498 378 NAFAH 382 (442)
Q Consensus 378 ~aF~h 382 (442)
...-|
T Consensus 298 ~~~~~ 302 (307)
T 1ydo_A 298 SSLEH 302 (307)
T ss_dssp C----
T ss_pred Hhhhh
Confidence 66655
No 9
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=3.1e-59 Score=464.66 Aligned_cols=277 Identities=19% Similarity=0.315 Sum_probs=248.1
Q ss_pred CCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCC---h--hHHH-HHHHHHHHhcccccccCC
Q 013498 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---K--EDFE-AVRTIAKEVGNAVDAESG 149 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~---~--~d~e-~v~~l~~~~~~~~~~~~~ 149 (442)
+|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|++.+. | .|.+ .++.+.+ .+ +
T Consensus 2 ~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~-~~-------~ 73 (298)
T 2cw6_A 2 LPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQK-FP-------G 73 (298)
T ss_dssp CCSBCEEEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCC-CT-------T
T ss_pred CCCceEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhh-CC-------C
Confidence 357899999999999999999999999999999999999999999986543 3 2333 3333222 11 1
Q ss_pred ccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------E
Q 013498 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------F 223 (442)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~------f 223 (442)
..+.++. .+.+++++++++ |++.|++++++||.|+++|++++++|+++++.++++++|++|++ |. |
T Consensus 74 --~~~~~l~-~~~~~i~~a~~a----g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~-v~~~l~~~~ 145 (298)
T 2cw6_A 74 --INYPVLT-PNLKGFEAAVAA----GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANIS-VRGYVSCAL 145 (298)
T ss_dssp --CBCCEEC-CSHHHHHHHHHT----TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCE-EEEEEETTT
T ss_pred --CEEEEEc-CCHHhHHHHHHC----CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-EEEEEEEEe
Confidence 1344455 588999998875 89999999999999999999999999999999999999999985 64 7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH
Q 013498 224 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 303 (442)
Q Consensus 224 ~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl 303 (442)
++||.+|++++++.++++.+.++|+++|+|+||+|.++|.+++++|+.+++.+|+ ++|++|+|||+|||+||+++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~---~~i~~H~Hn~~Gla~An~laA~ 222 (298)
T 2cw6_A 146 GCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPL---AALAVHCHDTYGQALANTLMAL 222 (298)
T ss_dssp CBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCG---GGEEEEEBCTTSCHHHHHHHHH
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCC---CeEEEEECCCCchHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999999999999973 7899999999999999999999
Q ss_pred HhCCCEEEeccccccc------ccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccc
Q 013498 304 CAGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGA 377 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGe------raGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~ 377 (442)
++||++||+|++|||| |+||++||+|+++|+.. |+++++|+++|.++++++++.+|+++++++|..|.
T Consensus 223 ~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~------g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~~ 296 (298)
T 2cw6_A 223 QMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGL------GIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATC 296 (298)
T ss_dssp HTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHH------TCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHHHC
T ss_pred HhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhc------CCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhhhc
Confidence 9999999999999999 99999999999999875 77899999999999999999999999999987764
No 10
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-59 Score=463.55 Aligned_cols=276 Identities=20% Similarity=0.277 Sum_probs=248.9
Q ss_pred CCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCC---hh--HH-HHHHHHHHHhcccccccCC
Q 013498 76 DPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS---KE--DF-EAVRTIAKEVGNAVDAESG 149 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~---~~--d~-e~v~~l~~~~~~~~~~~~~ 149 (442)
+|++|+|+|||||||+|++++.|++++|++|++.|+++||++||+|||.+. |. |. +.++.+.+.
T Consensus 5 ~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~---------- 74 (302)
T 2ftp_A 5 LPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR---------- 74 (302)
T ss_dssp CCSBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC----------
T ss_pred CCCCcEEEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc----------
Confidence 567899999999999999999999999999999999999999999986433 21 32 333333221
Q ss_pred ccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------E
Q 013498 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------F 223 (442)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~------f 223 (442)
....+++|. .+.++|++++++ |++.|++|+++||.|+++|+++|++|+++++++++++||++|+. |+ |
T Consensus 75 ~~~~~~~l~-~~~~~i~~a~~a----G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~-V~~~l~~~~ 148 (302)
T 2ftp_A 75 PGVTYAALA-PNLKGFEAALES----GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR-VRGYISCVL 148 (302)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHT----TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECTT
T ss_pred CCCEEEEEe-CCHHHHHHHHhC----CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe-EEEEEEEEe
Confidence 113466777 489999999885 99999999999999999999999999999999999999999985 75 7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH
Q 013498 224 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 303 (442)
Q Consensus 224 ~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl 303 (442)
++||.+|+|++++.++++.+.++|+|+|+|+||+|.++|.+++++++.+++.+| +++|++|+|||+|||+||+++|+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~---~~~l~~H~Hn~~Gla~An~laAv 225 (302)
T 2ftp_A 149 GCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP---RERLAGHFHDTYGQALANIYASL 225 (302)
T ss_dssp CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC---GGGEEEEEBCTTSCHHHHHHHHH
T ss_pred eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEeCCCccHHHHHHHHHH
Confidence 788899999999999999999999999999999999999999999999999997 37899999999999999999999
Q ss_pred HhCCCEEEeccccccc------ccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCcccc
Q 013498 304 CAGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVG 376 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGe------raGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG 376 (442)
++||++||+|++|||| |+||++||+|+++|+.. |+++++|+++|.++++++++++|+++++++|..+
T Consensus 226 ~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~------g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~~ 298 (302)
T 2ftp_A 226 LEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGL------EIHTGVDMHALVDAGQRICAVLGKSNGSRAAKAL 298 (302)
T ss_dssp HTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHT------TCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHHH
T ss_pred HhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhc------CCCCCcCHHHHHHHHHHHHHHhCCCCCccchhhc
Confidence 9999999999999999 99999999999999975 7889999999999999999999999999988763
No 11
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=3.6e-56 Score=441.75 Aligned_cols=270 Identities=18% Similarity=0.233 Sum_probs=243.9
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCCh------hHHHHHHHHHHHhcccccccCCc
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK------EDFEAVRTIAKEVGNAVDAESGY 150 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~------~d~e~v~~l~~~~~~~~~~~~~l 150 (442)
|++|+|+|||||||+|++++.|++++|++|++.|+++|++.||+|+|.+++ ++++.++.+++. .
T Consensus 2 ~~~v~i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~--------- 71 (295)
T 1ydn_A 2 AEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-D--------- 71 (295)
T ss_dssp CCBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-S---------
T ss_pred CCceEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-C---------
Confidence 568999999999999999999999999999999999999999999976543 467777776442 1
Q ss_pred cceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE------Ec
Q 013498 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE------FS 224 (442)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~------f~ 224 (442)
...+++|. .+.+++++++++ |++.|+++++.||.|.+.|++++.+|++++++++|++||+.|+. |. |+
T Consensus 72 ~~~v~~l~-~n~~~i~~a~~~----G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~-V~~~l~~~~~ 145 (295)
T 1ydn_A 72 GVRYSVLV-PNMKGYEAAAAA----HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLA-IRGYVSCVVE 145 (295)
T ss_dssp SSEEEEEC-SSHHHHHHHHHT----TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCE-EEEEEECSSE
T ss_pred CCEEEEEe-CCHHHHHHHHHC----CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCe-EEEEEEEEec
Confidence 12466776 688999998875 99999999999999999999999999999999999999999985 76 77
Q ss_pred cCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 225 PEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 225 ~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
+||.+|++++++.++++.+.+.|+++|+|+||+|.++|.+++++++.+++.+| +++|++|+|||+|||+||+++|++
T Consensus 146 ~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~---~~~l~~H~Hn~~Gla~an~l~Ai~ 222 (295)
T 1ydn_A 146 CPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP---AHSLAGHYHDTGGRALDNIRVSLE 222 (295)
T ss_dssp ETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC---GGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC---CCeEEEEECCCcchHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999987 378999999999999999999999
Q ss_pred hCCCEEEeccccccc------ccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCC
Q 013498 305 AGARQVEVTINGIGE------RAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPH 371 (442)
Q Consensus 305 aGa~~vd~Tv~GlGe------raGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~ 371 (442)
+||++||+|++|||| |+||++||+|+++|+.. |+++++|+++|.+++++++++.+.+.+..
T Consensus 223 aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~------g~~~~id~~~l~~~~~~~~~~~~~~~~~~ 289 (295)
T 1ydn_A 223 KGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEM------GFETGLDLDRLRSAGLFTQALRQDKAALE 289 (295)
T ss_dssp HTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHT------TCBCCCCHHHHHHHHHHHHHHHCC-----
T ss_pred hCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhc------CCCCCcCHHHHHHHHHHHHHHHCCCCCcc
Confidence 999999999999999 99999999999999864 78899999999999999999999877643
No 12
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=7.3e-56 Score=468.87 Aligned_cols=313 Identities=15% Similarity=0.172 Sum_probs=263.1
Q ss_pred CCCCceEEEeCCCCcCCCCCC-CCCCHHHHHHHHHHHhHcCCCEEEEccCCC--------ChhHHHHHHHHHHHhccccc
Q 013498 75 PDPNYVRVFDTTLRDGEQSPG-ATLTSKEKLDIARQLAKLGVDIIEAGFPAA--------SKEDFEAVRTIAKEVGNAVD 145 (442)
Q Consensus 75 ~~~~~V~I~DtTLRDG~Q~~g-~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~--------~~~d~e~v~~l~~~~~~~~~ 145 (442)
.++++|+|+|||||||+|+++ ..|++++|++|++.|+++||+.||+|+|++ ++++|++++.+.+..++
T Consensus 20 ~~~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~--- 96 (539)
T 1rqb_A 20 SEPREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPN--- 96 (539)
T ss_dssp CCSEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTT---
T ss_pred CCCCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCC---
Confidence 355779999999999999996 589999999999999999999999999876 88899999999886443
Q ss_pred ccCCccceEeeecccc--------hhh-HHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc
Q 013498 146 AESGYVPVICGLSRCN--------ERD-IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL 216 (442)
Q Consensus 146 ~~~~l~~~i~~~~r~~--------~~d-I~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~ 216 (442)
..+.+|+|.. .+| ++..++....+|++.|++|.++||+ +++.++++++++.
T Consensus 97 ------~~l~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~ak~~ 156 (539)
T 1rqb_A 97 ------SRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAVKKA 156 (539)
T ss_dssp ------SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHT
T ss_pred ------CEEEEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHHHHC
Confidence 2456666532 122 3334444455699999999999986 4577999999999
Q ss_pred CCCeE--EEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch
Q 013498 217 GCDDV--EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL 294 (442)
Q Consensus 217 G~~~V--~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL 294 (442)
|.. | .++++++++++++|+.++++++.++|+++|+||||+|.++|.+++++|+.+++++|+ +++|++|||||+||
T Consensus 157 G~~-v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~--~i~I~~H~Hnd~Gl 233 (539)
T 1rqb_A 157 GKH-AQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQ--KTQINLHCHSTTGV 233 (539)
T ss_dssp TCE-EEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCT--TCCEEEEEBCTTSC
T ss_pred CCe-EEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCC--CceEEEEeCCCCCh
Confidence 985 6 577899999999999999999999999999999999999999999999999999972 37899999999999
Q ss_pred HHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCcc
Q 013498 295 STANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAI 374 (442)
Q Consensus 295 A~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pi 374 (442)
|+||+++|+++||++||+|++|+|||+||++||+|+++|+.. |+++++|+++|.+++++++++.+++++.+.|+
T Consensus 234 AvAN~laAveAGa~~VD~ti~g~GertGN~~lE~lv~~L~~~------g~~tgidl~~L~~is~~v~~~~~~~~~~~~~~ 307 (539)
T 1rqb_A 234 TEVSLMKAIEAGVDVVDTAISSMSLGPGHNPTESVAEMLEGT------GYTTNLDYDRLHKIRDHFKAIRPKYKKFESKT 307 (539)
T ss_dssp HHHHHHHHHHTTCSEEEEBCGGGCSTTSBCBHHHHHHHTTTS------SEECCCCHHHHHHHHHHHHHHGGGGGGGCCSC
T ss_pred HHHHHHHHHHhCCCEEEEeccccCCCccChhHHHHHHHHHhc------CCCchhhHHHHHHHHHHHHHHhCCCcCCCCCc
Confidence 999999999999999999999999999999999999999975 77899999999999999999999999999998
Q ss_pred -ccchhhhhc------cCcccccccc-----CCCCCCCC-Cc-cccCCCccccceEEecccccHH
Q 013498 375 -VGANAFAHE------SGIHQDGMLK-----HKGTYEII-SP-EDIGLERSSEAGIVLGKLSGRH 425 (442)
Q Consensus 375 -vG~~aF~h~------sGiH~dg~lk-----~~~~Ye~~-~P-e~iG~~r~~~~~i~lg~~SG~~ 425 (442)
+|.++|.|+ |++|+++..+ .+..++.+ .. +++|.- +.++..|.--
T Consensus 308 ~~~~~v~~he~pGG~~Snl~~q~~~~G~~~~~~~v~~~~~~v~~~~G~~------~~VTP~Sq~v 366 (539)
T 1rqb_A 308 LVDTSIFKSQIPGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFP------PLVTPSSQIV 366 (539)
T ss_dssp SCCCTHHHHCCCHHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHTTCC------CCCTTHHHHH
T ss_pred cCCCceEEecCCcchhhHHHHHHHHcCcHHHHHHHHHHHHHHHHHcCCC------cccCchhhhH
Confidence 999999987 4455554333 23344444 33 456642 4466666443
No 13
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=8.3e-55 Score=454.96 Aligned_cols=293 Identities=19% Similarity=0.286 Sum_probs=252.5
Q ss_pred CCCceEEEeCCCCcCCCCCC-CCCCHHHHHHHHHHHhHcCCCEEEEccCCC--------ChhHHHHHHHHHHHhcccccc
Q 013498 76 DPNYVRVFDTTLRDGEQSPG-ATLTSKEKLDIARQLAKLGVDIIEAGFPAA--------SKEDFEAVRTIAKEVGNAVDA 146 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g-~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~--------~~~d~e~v~~l~~~~~~~~~~ 146 (442)
++++|+|+|||||||+|+++ ..|++++|++|++.|+++||+.||+|+|++ ++++|++++.+.+..++
T Consensus 4 ~~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~---- 79 (464)
T 2nx9_A 4 AIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPN---- 79 (464)
T ss_dssp CCCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSS----
T ss_pred CCCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCC----
Confidence 35679999999999999986 489999999999999999999999999875 78899999999886543
Q ss_pred cCCccceEeeecccc--------hhh-HHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Q 013498 147 ESGYVPVICGLSRCN--------ERD-IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG 217 (442)
Q Consensus 147 ~~~l~~~i~~~~r~~--------~~d-I~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G 217 (442)
+.+.+|+|.. .+| ++..++....+|++.|++|.++||+ +++.++|+++|+.|
T Consensus 80 -----~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~~ak~~G 140 (464)
T 2nx9_A 80 -----TPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQAVKKMG 140 (464)
T ss_dssp -----SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTT
T ss_pred -----CeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHHHHHHCC
Confidence 2456666632 122 2333444445699999999999986 45678999999999
Q ss_pred CCeEE--EccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH
Q 013498 218 CDDVE--FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 295 (442)
Q Consensus 218 ~~~V~--f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA 295 (442)
.. |. ++++++++++++++.++++++.++|+++|+||||+|.++|.+++++|+.++++++ ++|++|||||+|||
T Consensus 141 ~~-v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~----~~i~~H~Hnd~GlA 215 (464)
T 2nx9_A 141 AH-AQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD----VELHLHCHSTAGLA 215 (464)
T ss_dssp CE-EEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCC----SCEEEEECCTTSCH
T ss_pred CE-EEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC----CeEEEEECCCCChH
Confidence 85 64 5668999999999999999999999999999999999999999999999999983 78999999999999
Q ss_pred HHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccc
Q 013498 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIV 375 (442)
Q Consensus 296 ~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~piv 375 (442)
+||+++|+++||++||+|++|||||+||++||+|+++|+.. |+++++|+++|.+++++++++.+.
T Consensus 216 vAN~laAv~AGa~~VD~ti~g~gertGN~~lE~lv~~L~~~------g~~tgidl~~L~~is~~v~~~~~~--------- 280 (464)
T 2nx9_A 216 DMTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQGT------GYDTGLDIAKLEQIAAYFRDVRKK--------- 280 (464)
T ss_dssp HHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTS------TTCCCCCHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHhCCCEEEEeccccCCCCcCHHHHHHHHHHHhc------CCCcccCHHHHHHHHHHHHHHHhh---------
Confidence 99999999999999999999999999999999999999975 678999999999999999998775
Q ss_pred cchhhhhccCccccccccCCCCCCCCCccccCCCccccceEEeccccc--HHHHHHHHHHcCCC
Q 013498 376 GANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRLKEVCQY 437 (442)
Q Consensus 376 G~~aF~h~sGiH~dg~lk~~~~Ye~~~Pe~iG~~r~~~~~i~lg~~SG--~~~v~~~l~e~G~~ 437 (442)
|.||.++.+|..+ +++....+| .+++...|+++|+.
T Consensus 281 ----------------------~~~~~~~~~g~~~----~v~~~~~pGg~~snl~~q~~~~g~~ 318 (464)
T 2nx9_A 281 ----------------------YHAFEGMMKGSDA----RILVAQVPGGMLTNMESQLKQQNAL 318 (464)
T ss_dssp ----------------------TGGGCCSCCSCCT----HHHHHCCCHHHHHHHHHHHHTTSCG
T ss_pred ----------------------cccccCCCcCCcC----CeEEecCCCchHhHHHHHHHHcCCH
Confidence 3344446777665 477888888 89999999999984
No 14
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=2.2e-54 Score=438.08 Aligned_cols=277 Identities=22% Similarity=0.263 Sum_probs=247.5
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEc----cCCCC-------hhHHHHHHHHHHHhccccc
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAG----FPAAS-------KEDFEAVRTIAKEVGNAVD 145 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG----~p~~~-------~~d~e~v~~l~~~~~~~~~ 145 (442)
+++|+|+|||||||+|++++.|++++|++|++.|+++||+.||+| +|.++ .++++.++.+.+..++
T Consensus 6 ~~~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~--- 82 (345)
T 1nvm_A 6 SKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISH--- 82 (345)
T ss_dssp CCBCEEEECTTTHHHHHTTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSS---
T ss_pred CCCcEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCC---
Confidence 357999999999999999999999999999999999999999998 78664 4578999888764322
Q ss_pred ccCCccceEeee---cccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE
Q 013498 146 AESGYVPVICGL---SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE 222 (442)
Q Consensus 146 ~~~~l~~~i~~~---~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~ 222 (442)
..+.+| ++++.+++++++++ |++.++++++.|+. +++.+++++++++|+. |.
T Consensus 83 ------~~i~~l~~p~~~~~~~i~~a~~a----Gvd~v~I~~~~s~~--------------~~~~~~i~~ak~~G~~-v~ 137 (345)
T 1nvm_A 83 ------AQIATLLLPGIGSVHDLKNAYQA----GARVVRVATHCTEA--------------DVSKQHIEYARNLGMD-TV 137 (345)
T ss_dssp ------SEEEEEECBTTBCHHHHHHHHHH----TCCEEEEEEETTCG--------------GGGHHHHHHHHHHTCE-EE
T ss_pred ------CEEEEEecCCcccHHHHHHHHhC----CcCEEEEEEeccHH--------------HHHHHHHHHHHHCCCE-EE
Confidence 246666 67789999999886 89999999999874 4567899999999984 99
Q ss_pred EccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHH
Q 013498 223 FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG 302 (442)
Q Consensus 223 f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaA 302 (442)
+.++|+++++++++.++++.+.++|++.|+|+||+|.++|.+++++|+.+++++|+ +++|++|||||+|||+||+++|
T Consensus 138 ~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~--~~pi~~H~Hn~~G~avAn~laA 215 (345)
T 1nvm_A 138 GFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKP--ETQVGMHAHHNLSLGVANSIVA 215 (345)
T ss_dssp EEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCT--TSEEEEECBCTTSCHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCC--CceEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999962 4899999999999999999999
Q ss_pred HHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHH-hCCCCCCCCccccchhhh
Q 013498 303 ACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEY-TGLHVQPHKAIVGANAFA 381 (442)
Q Consensus 303 l~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~-~g~~i~~~~pivG~~aF~ 381 (442)
+++||++||+|++|||||+||++||+|+++|+.. |+++++|+++|.++++++++. .+. ++|+.+...+.
T Consensus 216 ~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~~------g~~~~idl~~l~~~~~~~~~~~~~~----~~~~~~~~~~~ 285 (345)
T 1nvm_A 216 VEEGCDRVDASLAGMGAGAGNAPLEVFIAVAERL------GWNHGTDLYTLMDAADDIVRPLQDR----PVRVDRETLGL 285 (345)
T ss_dssp HHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHH------TCBCCSCHHHHHHHHHHTTGGGCSS----CCSCCHHHHHH
T ss_pred HHcCCCEEEecchhccCCccCcCHHHHHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHhcC----CCCCChHHHhe
Confidence 9999999999999999999999999999999975 788999999999999999774 332 35788888888
Q ss_pred hccCcccccccc
Q 013498 382 HESGIHQDGMLK 393 (442)
Q Consensus 382 h~sGiH~dg~lk 393 (442)
..+|.|.+-..+
T Consensus 286 ~~~G~~~~~~~~ 297 (345)
T 1nvm_A 286 GYAGVYSSFLRH 297 (345)
T ss_dssp HHHTCCTTHHHH
T ss_pred eccccchhHHHH
Confidence 899999887655
No 15
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=1.8e-53 Score=464.28 Aligned_cols=276 Identities=20% Similarity=0.196 Sum_probs=239.6
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCcCCCCCCC-CCCHHHHHHHHHHHhHcC--CCEEEEc--------cCCCChhHHHHH
Q 013498 65 TRPEYIPNRIPDPNYVRVFDTTLRDGEQSPGA-TLTSKEKLDIARQLAKLG--VDIIEAG--------FPAASKEDFEAV 133 (442)
Q Consensus 65 ~~~~~~~~~~~~~~~V~I~DtTLRDG~Q~~g~-~fs~e~kl~ia~~L~~~G--V~~IEvG--------~p~~~~~d~e~v 133 (442)
..|+.+..|+.++++|+|+|||||||+|+++. .|++++|++|++.|+++| ++.||+| ||..++.+|+++
T Consensus 88 ~gp~~~~~~~~~~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l 167 (718)
T 3bg3_A 88 EGPEGFARAVRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRL 167 (718)
T ss_dssp HHHHHHHHHHHHCCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHH
T ss_pred hCHHHHHHHHhccCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHH
Confidence 36777777777788999999999999999976 599999999999999995 5569998 555667789999
Q ss_pred HHHHHHhcccccccCCccceEeeeccc-------------chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHH
Q 013498 134 RTIAKEVGNAVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQ 200 (442)
Q Consensus 134 ~~l~~~~~~~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~ 200 (442)
+.+.+.+++. .+.+|.|+ ..++|+.++++ |++.|++|.++|+
T Consensus 168 ~~l~~~~~~~---------~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~----Gvd~irIf~s~n~------------ 222 (718)
T 3bg3_A 168 QELRELIPNI---------PFQMLLRGANAVGYTNYPDNVVFKFCEVAKEN----GMDVFRVFDSLNY------------ 222 (718)
T ss_dssp HHHHHHCSSS---------CEEEEECGGGTTSSSCCCHHHHHHHHHHHHHH----TCCEEEEECSSCC------------
T ss_pred HHHHHHcccc---------hHHHHhcccccccccccCCcchHHHHHHHHhc----CcCEEEEEecHHH------------
Confidence 9999987552 34556665 35677777775 9999999998875
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEE----c--cCCCCCC--CHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHH
Q 013498 201 QVVEIARSMVKFARSLGCDDVEF----S--PEDAGRS--DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADI 272 (442)
Q Consensus 201 e~l~~~~~~v~~ar~~G~~~V~f----~--~edasr~--d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l 272 (442)
++++...++++++.|.. |.+ . .+|.+|. +++|+.++++.+.++||++|+|+||+|.++|.+++++|+.+
T Consensus 223 --l~~l~~~i~~ak~~G~~-v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~l 299 (718)
T 3bg3_A 223 --LPNMLLGMEAAGSAGGV-VEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSL 299 (718)
T ss_dssp --HHHHHHHHHHHHTTTSE-EEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCe-EEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHH
Confidence 35778899999999974 543 3 2577776 99999999999999999999999999999999999999999
Q ss_pred HHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhH
Q 013498 273 KANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRH 352 (442)
Q Consensus 273 ~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~ 352 (442)
++++|+ ++|++|||||+|||+||+++|+++||++||+|++|||||+||++||+|+++|+.+ |+++++|+++
T Consensus 300 k~~~p~---~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGertGN~~lE~vv~~L~~~------g~~tgidl~~ 370 (718)
T 3bg3_A 300 RDRFPD---LPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRGT------PLDTEVPMER 370 (718)
T ss_dssp HHHSTT---CCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTS------TTCCCCCHHH
T ss_pred HHhCCC---CeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccccccCchhHHHHHHHHHhc------CCCcccCHHH
Confidence 999974 7899999999999999999999999999999999999999999999999999975 6789999999
Q ss_pred HHHHHHHHHHHhCCCCCCC--Cccccc
Q 013498 353 IVMASKMVEEYTGLHVQPH--KAIVGA 377 (442)
Q Consensus 353 L~~ls~~v~~~~g~~i~~~--~pivG~ 377 (442)
|.+++++++++.+++.+.+ .+++|.
T Consensus 371 L~~~s~~v~~~~~~~~~~~~~~~~~g~ 397 (718)
T 3bg3_A 371 VFDYSEYWEGARGLYAAFDCTATMKSG 397 (718)
T ss_dssp HHHHHHHHHHHHHHTGGGCGGGTCCSC
T ss_pred HHHHHHHHHHHhCCCcCCcCCcccccc
Confidence 9999999999999887666 556654
No 16
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=2.5e-51 Score=410.76 Aligned_cols=275 Identities=19% Similarity=0.242 Sum_probs=226.0
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChh----------HHHHHHHHHHHhcccccccC
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKE----------DFEAVRTIAKEVGNAVDAES 148 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~----------d~e~v~~l~~~~~~~~~~~~ 148 (442)
+|+|+|||||||+|++++.|++++|++|++.|+++||+.||+|||. +|. +++.++.+++ .++
T Consensus 2 ~V~I~DtTlRDG~Qs~~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~-~p~~~f~~~~~~~~~e~l~~i~~-~~~------ 73 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYTNWDFNSKIVDAYILAMNELPIDYLEVGYRN-KPSKEYMGKFGYTPVSVLKHLRN-IST------ 73 (320)
T ss_dssp -CEEEECHHHHHGGGGTTCCCHHHHHHHHHHHHTTTCCEEEEEECC-SCCSSCCCHHHHCCHHHHHHHHH-HCC------
T ss_pred eEEEEECCcCccccCCCCcCCHHHHHHHHHHHHHhCCCEEEEeccc-CCccccccccccChHHHHHHHhh-ccC------
Confidence 5899999999999999999999999999999999999999999974 332 2788888877 333
Q ss_pred CccceEeeecccc---hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 149 GYVPVICGLSRCN---ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 149 ~l~~~i~~~~r~~---~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..+.++.|.. .+|++..+.+. .+|++.+.++.... +++++.++++++|++|+. |.|++
T Consensus 74 ---~~~~~L~r~~~~~~~dv~~~~~a~-~~Gvd~~ri~~~~~--------------nle~~~~~v~~ak~~G~~-v~~~~ 134 (320)
T 3dxi_A 74 ---KKIAIMLNEKNTTPEDLNHLLLPI-IGLVDMIRIAIDPQ--------------NIDRAIVLAKAIKTMGFE-VGFNV 134 (320)
T ss_dssp ---SEEEEEEEGGGCCGGGHHHHHGGG-TTTCSEEEEEECGG--------------GHHHHHHHHHHHHTTTCE-EEEEE
T ss_pred ---CeEEEEecCCCCChhhHHHHHHhh-hcCCCEEEEEecHH--------------HHHHHHHHHHHHHHCCCE-EEEEE
Confidence 2455665542 35787665553 37999999987432 268888999999999985 99999
Q ss_pred CCCCCCC-HHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 226 EDAGRSD-RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 226 edasr~d-~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
+++++.+ ++++.+.+.+ .++|++.|+|+||+|.++|.+++++|+.++++++ ++|++|+|||+|||+||+++|++
T Consensus 135 ~~~~~~~~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~----~~i~~H~Hn~~G~a~an~laA~~ 209 (320)
T 3dxi_A 135 MYMSKWAEMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH----VPVGFHGHDNLQLGLINSITAID 209 (320)
T ss_dssp CCTTTGGGSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC----SCEEEECBCTTSCHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC----CeEEEEeCCCCccHHHHHHHHHH
Confidence 8877763 3333334444 4679999999999999999999999999999985 68999999999999999999999
Q ss_pred hCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhhhcc
Q 013498 305 AGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFAHES 384 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h~s 384 (442)
+||++||+|++|||||+||++||+|+++|+.. +.+++|++.|.+++++++++. +++++|.++|.|+|
T Consensus 210 aGa~~vd~si~GlG~~~GN~~~E~lv~~L~~~-------~~~~~dl~~l~~~~~~~~~~~------~~~~~g~~~~~~~s 276 (320)
T 3dxi_A 210 DGIDFIDATITGMGRGAGNLKMELLLTYLNKH-------HGLNVDFNVLGNIITTFTPLL------EKYQWGTNLPYMLS 276 (320)
T ss_dssp TTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH-------SCCCCCHHHHHHHHHHHHHHH------HHHCCSCCHHHHHH
T ss_pred hCCCEEEEeccccCCcccchhHHHHHHHHHhc-------cCCCcCHHHHHHHHHHHHHHH------HhcCCCCchhhHHH
Confidence 99999999999999999999999999999862 347899999999999999875 57788888776655
Q ss_pred C---cccccccc--CCCCC
Q 013498 385 G---IHQDGMLK--HKGTY 398 (442)
Q Consensus 385 G---iH~dg~lk--~~~~Y 398 (442)
| +|++++.+ ++.+|
T Consensus 277 g~~g~H~~~i~~~~~~~~~ 295 (320)
T 3dxi_A 277 GANNIPQKEVMDWVTNRVY 295 (320)
T ss_dssp HHTTCCHHHHHHHHC---C
T ss_pred hccCCCHHHHHHHHhcCCC
Confidence 5 99999844 34444
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=3.6e-49 Score=452.04 Aligned_cols=308 Identities=19% Similarity=0.199 Sum_probs=255.5
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCcCCCCCCC-CCCHHHHHHHHHHHhHcCCCE--EEE----ccCCC----ChhHHHHHH
Q 013498 66 RPEYIPNRIPDPNYVRVFDTTLRDGEQSPGA-TLTSKEKLDIARQLAKLGVDI--IEA----GFPAA----SKEDFEAVR 134 (442)
Q Consensus 66 ~~~~~~~~~~~~~~V~I~DtTLRDG~Q~~g~-~fs~e~kl~ia~~L~~~GV~~--IEv----G~p~~----~~~d~e~v~ 134 (442)
.|+.+..|+.++++|+|+|||||||+|+++. .|++++|++|++.|+++||++ ||+ |||.. ++.+|++++
T Consensus 537 ~~~~~~~~~~~~~~v~i~DtTLRDG~Qs~~~~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~ 616 (1165)
T 2qf7_A 537 GPKKFGEWMRNEKRVLLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLA 616 (1165)
T ss_dssp CHHHHHHHHHHCSSCEEEECTTTHHHHHHHTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHH
T ss_pred CHHHHHHHhhcCCceEEEecccccccccCCcccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHH
Confidence 5566666777788999999999999999986 699999999999999996654 998 67733 667899999
Q ss_pred HHHHHhcccccccCCccceEeeeccc----chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHH
Q 013498 135 TIAKEVGNAVDAESGYVPVICGLSRC----NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMV 210 (442)
Q Consensus 135 ~l~~~~~~~~~~~~~l~~~i~~~~r~----~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v 210 (442)
.+.+.+++..........++++|++. ..++|++++++ |++.+++|.+.++ ++++..++
T Consensus 617 ~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~~----g~d~irif~sl~~--------------~~~~~~~i 678 (1165)
T 2qf7_A 617 LIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQAAKG----GIDLFRVFDCLNW--------------VENMRVSM 678 (1165)
T ss_dssp HHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHH----TCCEEEEECTTCC--------------GGGGHHHH
T ss_pred HHHHHchhhHHHHHhccccccccccCCchhHHHHHHHHHhc----CcCEEEEEeeHHH--------------HHHHHHHH
Confidence 99988765311000000122334332 34678888776 8999999998775 45677899
Q ss_pred HHHHHcCCCeEEEc------cCCCCC--CCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcce
Q 013498 211 KFARSLGCDDVEFS------PEDAGR--SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENV 282 (442)
Q Consensus 211 ~~ar~~G~~~V~f~------~edasr--~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v 282 (442)
+++++.|.. |.+. ++|.+| ++++|+.++++++.++|+++|+||||+|.++|.+++++|+.++++++ +
T Consensus 679 ~~~~~~g~~-v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~----~ 753 (1165)
T 2qf7_A 679 DAIAEENKL-CEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATG----L 753 (1165)
T ss_dssp HHHHHTTCE-EEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCS----S
T ss_pred HHHHhccce-EEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcC----C
Confidence 999999964 5432 467878 89999999999999999999999999999999999999999999982 7
Q ss_pred eEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHH
Q 013498 283 VISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEE 362 (442)
Q Consensus 283 ~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~ 362 (442)
+|++|||||+|||+||+++|+++||++||+|++|||||+||++||+|+++|+.. |+++++|+++|.++++++++
T Consensus 754 ~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~~Gn~~le~vv~~L~~~------g~~tgidl~~L~~~s~~~~~ 827 (1165)
T 2qf7_A 754 PIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGNTSQPCLGSIVEALSGS------ERDPGLDPAWIRRISFYWEA 827 (1165)
T ss_dssp CEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHHTTS------TTCCCCCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCCccchhHHHHHHHHHhc------CCCccccHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999975 77899999999999999999
Q ss_pred HhCCCCCCCCccccchhhhhccCccccccccCCCCCCCCCccccCCCccccceEEeccccc--HHHHHHHHHHcCCC
Q 013498 363 YTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRLKEVCQY 437 (442)
Q Consensus 363 ~~g~~i~~~~pivG~~aF~h~sGiH~dg~lk~~~~Ye~~~Pe~iG~~r~~~~~i~lg~~SG--~~~v~~~l~e~G~~ 437 (442)
+.+.. .||.|+.+|..+ ++.....+| .+++...++++|+.
T Consensus 828 ~~~~~-------------------------------~~~~~~~~~~~~----~v~~~~~pGG~~snl~~q~~~~g~~ 869 (1165)
T 2qf7_A 828 VRNQY-------------------------------AAFESDLKGPAS----EVYLHEMPGGQFTNLKEQARSLGLE 869 (1165)
T ss_dssp HHGGG-------------------------------GGGCCCCCSCCT----THHHHCCCHHHHHHHHHHHHHTTCG
T ss_pred Hhhhc-------------------------------cCCCCCccCCcc----ceEeccCCCccHHHHHHHHHHcCCc
Confidence 88763 234467777665 366777777 89999999999986
No 18
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=4.6e-46 Score=425.69 Aligned_cols=300 Identities=16% Similarity=0.181 Sum_probs=249.6
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCcCCCCCCCC-CCHHHHHHHHHHHhHc--CCCEEEE--------ccCCCChhHHHHHH
Q 013498 66 RPEYIPNRIPDPNYVRVFDTTLRDGEQSPGAT-LTSKEKLDIARQLAKL--GVDIIEA--------GFPAASKEDFEAVR 134 (442)
Q Consensus 66 ~~~~~~~~~~~~~~V~I~DtTLRDG~Q~~g~~-fs~e~kl~ia~~L~~~--GV~~IEv--------G~p~~~~~d~e~v~ 134 (442)
.|+-+..|+.++++|+|+|||||||+|++++. |++++|++|++.|+++ |+..||+ |+|..++++|+.++
T Consensus 519 ~~~~~~~~~~~~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~ 598 (1150)
T 3hbl_A 519 GPKGVAEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLE 598 (1150)
T ss_dssp HHHHHHHHHTTCSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHH
T ss_pred CHHHHHHHHHhCCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHH
Confidence 45566677888899999999999999999886 9999999999999999 8888887 46788889999999
Q ss_pred HHHHHhcccccccCCccceEeeeccc-------------chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHH
Q 013498 135 TIAKEVGNAVDAESGYVPVICGLSRC-------------NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQ 201 (442)
Q Consensus 135 ~l~~~~~~~~~~~~~l~~~i~~~~r~-------------~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e 201 (442)
.+.+..++. .+.+|+|+ ..++++++++ +|++.|++|+++|++|+..
T Consensus 599 ~l~~~~~~~---------~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~----~Gvd~irif~~~sd~~~~~-------- 657 (1150)
T 3hbl_A 599 RLRKAIPNV---------LFQMLLRASNAVGYKNYPDNVIHKFVQESAK----AGIDVFRIFDSLNWVDQMK-------- 657 (1150)
T ss_dssp HHHHHCCSS---------EEEEEEETTTBTCSSCCCHHHHHHHHHHHHH----TTCCEEEEECTTCCGGGGH--------
T ss_pred HHHHhCCCC---------eEEEEeccccccccccCCchhHHHHHHHHHh----CCcCEEEEEeeCCHHHHHH--------
Confidence 999876542 45667766 3445666655 5999999999999987643
Q ss_pred HHHHHHHHHHHHHHcCCCe---EE-----EccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHH
Q 013498 202 VVEIARSMVKFARSLGCDD---VE-----FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIK 273 (442)
Q Consensus 202 ~l~~~~~~v~~ar~~G~~~---V~-----f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~ 273 (442)
.+++.+++.|... ++ +++++++|++++|+.++++.+.++|+++|+|+||+|.++|.+++++|+.++
T Consensus 658 ------~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~ 731 (1150)
T 3hbl_A 658 ------VANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELK 731 (1150)
T ss_dssp ------HHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHH
Confidence 3556667777631 22 345678899999999999999999999999999999999999999999999
Q ss_pred HhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHH
Q 013498 274 ANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHI 353 (442)
Q Consensus 274 ~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L 353 (442)
+++ +++|++|||||+|||+||+++|+++||++||+|++|||||+||++||+|+++|+.. |+++++|+++|
T Consensus 732 ~~~----~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~~lE~lv~~L~~~------g~~tgidl~~l 801 (1150)
T 3hbl_A 732 SAV----DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNGF------PRHLRTDIEGM 801 (1150)
T ss_dssp HHC----CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCCBHHHHHHHTTTS------SCCBCSCHHHH
T ss_pred Hhc----CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCccHHHHHHHHHhc------CCCcCccHHHH
Confidence 997 37899999999999999999999999999999999999999999999999999875 78899999999
Q ss_pred HHHHHHHHHHhCCCCCCCCccccchhhhhccCccccccccCCCCCCCCCccccCCCccccceEEeccccc--HHHHHHHH
Q 013498 354 VMASKMVEEYTGLHVQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIISPEDIGLERSSEAGIVLGKLSG--RHALKDRL 431 (442)
Q Consensus 354 ~~ls~~v~~~~g~~i~~~~pivG~~aF~h~sGiH~dg~lk~~~~Ye~~~Pe~iG~~r~~~~~i~lg~~SG--~~~v~~~l 431 (442)
.+++++++++.+. |.+|.+...|... +++.....| -++++..|
T Consensus 802 ~~~~~~~~~~~~~-------------------------------y~~~~~~~~~~~~----~v~~~~~PGg~~snl~~q~ 846 (1150)
T 3hbl_A 802 ESLSHYWSTVRTY-------------------------------YSDFESDIKSPNT----EIYQHEMPGGQYSNLSQQA 846 (1150)
T ss_dssp HHHHHHHHHHHGG-------------------------------GGGGCCSCCSCCT----THHHHCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-------------------------------hccccCCCCCCcc----ceEEeeCCCchhhHHHHHH
Confidence 9999999998773 3333333333221 255556666 47888899
Q ss_pred HHcCCC
Q 013498 432 KEVCQY 437 (442)
Q Consensus 432 ~e~G~~ 437 (442)
+++|..
T Consensus 847 ~~~g~~ 852 (1150)
T 3hbl_A 847 KSLGLG 852 (1150)
T ss_dssp HHTTCG
T ss_pred HHCCcH
Confidence 998863
No 19
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.90 E-value=2e-08 Score=97.37 Aligned_cols=177 Identities=16% Similarity=0.143 Sum_probs=110.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceEe
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVIC 155 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d---------------------~e~v~~l~~~~~~~~~~~~~l~~~i~ 155 (442)
.+.++.+++++.|.+.|+|.||+|+|.+.|- | ++.++.+.+..++ .|.+.
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--------~Pi~~ 99 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD--------IPFLL 99 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--------SCEEE
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC--------CCEEE
Confidence 5668899999999999999999999976541 1 2335555443211 13222
Q ss_pred --eecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCH
Q 013498 156 --GLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 233 (442)
Q Consensus 156 --~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~ 233 (442)
-|.+...-+++..++....+|++.+.+. |. . .+.+.+.++.++++|+..+.+.. ..++.
T Consensus 100 m~y~n~v~~~g~~~f~~~~~~aG~dgvii~----dl--------~----~ee~~~~~~~~~~~gl~~i~l~~---p~t~~ 160 (262)
T 2ekc_A 100 MTYYNPIFRIGLEKFCRLSREKGIDGFIVP----DL--------P----PEEAEELKAVMKKYVLSFVPLGA---PTSTR 160 (262)
T ss_dssp ECCHHHHHHHCHHHHHHHHHHTTCCEEECT----TC--------C----HHHHHHHHHHHHHTTCEECCEEC---TTCCH
T ss_pred EecCcHHHHhhHHHHHHHHHHcCCCEEEEC----CC--------C----HHHHHHHHHHHHHcCCcEEEEeC---CCCCH
Confidence 1222122233455555566799976553 21 1 14567788999999985333322 23667
Q ss_pred HHHHHHHHHHHHcCCcEEeccCcccccCHHH---HHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 234 KFLYEILGEVIKVGATTLNIPDTVGITMPTE---FGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~---v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+.+.++++.... -+..+.+.+++|...|.. +.++++.+++... ++|.+ ++|...++..+++.+||+.|
T Consensus 161 ~rl~~ia~~a~g-fiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~----~pv~v----G~GI~t~e~~~~~~~gADgv 231 (262)
T 2ekc_A 161 KRIKLICEAADE-MTYFVSVTGTTGAREKLPYERIKKKVEEYRELCD----KPVVV----GFGVSKKEHAREIGSFADGV 231 (262)
T ss_dssp HHHHHHHHHCSS-CEEEESSCC---------CHHHHHHHHHHHHHCC----SCEEE----ESSCCSHHHHHHHHTTSSEE
T ss_pred HHHHHHHHhCCC-CEEEEecCCccCCCCCcCcccHHHHHHHHHhhcC----CCEEE----eCCCCCHHHHHHHHcCCCEE
Confidence 777777766532 245667789999998855 8899999999762 45665 79999899999999999886
No 20
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.48 E-value=1.5e-06 Score=84.70 Aligned_cols=175 Identities=18% Similarity=0.206 Sum_probs=107.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceEee
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVICG 156 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d---------------------~e~v~~l~~~~~~~~~~~~~l~~~i~~ 156 (442)
+.+.-+++++.|.+.|+|.||+|.|.+.|- | ++.++++++...+ +|.+ .
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~--------~Piv-l 102 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPE--------TPIG-L 102 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT--------SCEE-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--------CCEE-E
Confidence 467789999999999999999999976551 1 2444554443101 2322 1
Q ss_pred ecccch---hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCH
Q 013498 157 LSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 233 (442)
Q Consensus 157 ~~r~~~---~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~ 233 (442)
++-.|. -++++.++..+++|++.+.+. |+ .. +...+.++.++++|+. +.+-+ +..++.
T Consensus 103 m~Y~n~v~~~g~~~f~~~~~~aGvdGvIip----Dl--------p~----ee~~~~~~~~~~~gl~-~I~lv--ap~t~~ 163 (271)
T 3nav_A 103 LMYANLVYARGIDDFYQRCQKAGVDSVLIA----DV--------PT----NESQPFVAAAEKFGIQ-PIFIA--PPTASD 163 (271)
T ss_dssp EECHHHHHHTCHHHHHHHHHHHTCCEEEET----TS--------CG----GGCHHHHHHHHHTTCE-EEEEE--CTTCCH
T ss_pred EecCcHHHHHhHHHHHHHHHHCCCCEEEEC----CC--------CH----HHHHHHHHHHHHcCCe-EEEEE--CCCCCH
Confidence 222232 244555555556699987663 21 11 3356788999999986 43333 344556
Q ss_pred HHHHHHHHHHHHcCCcEEeccCccccc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH-HHHhCCCEE
Q 013498 234 KFLYEILGEVIKVGATTLNIPDTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-GACAGARQV 310 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT~G~~--~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANala-Al~aGa~~v 310 (442)
+.+.++++..... +..+.+.+++|.. .|..+.++++.+|+... +|+.+ .+|....+... ++.+||+.|
T Consensus 164 eri~~i~~~~~gf-iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~----~Pv~v----GfGIst~e~~~~~~~~gADgv 234 (271)
T 3nav_A 164 ETLRAVAQLGKGY-TYLLSRAGVTGAETKANMPVHALLERLQQFDA----PPALL----GFGISEPAQVKQAIEAGAAGA 234 (271)
T ss_dssp HHHHHHHHHCCSC-EEECCCC--------CCHHHHHHHHHHHHTTC----CCEEE----CSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCe-EEEEeccCCCCcccCCchhHHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 6665555442211 3445567888886 47889999999999863 45555 68887777777 999999986
No 21
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.38 E-value=2.3e-06 Score=83.27 Aligned_cols=176 Identities=17% Similarity=0.191 Sum_probs=107.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceEe
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVIC 155 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d---------------------~e~v~~l~~~~~~~~~~~~~l~~~i~ 155 (442)
.+.+.-.++++.|.+.|+|.||+|+|.+.|- | ++.++.+++... . .|.+
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-------~-~Piv- 99 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP-------D-MPIG- 99 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-------T-CCEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-------C-CCEE-
Confidence 4567789999999999999999999876541 1 344444443200 1 2322
Q ss_pred eecccch---hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCC
Q 013498 156 GLSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD 232 (442)
Q Consensus 156 ~~~r~~~---~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d 232 (442)
.++-.|. -++++.++..+++|++.+.+..-. .+...+.++.++++|++ ..+-+ +..++
T Consensus 100 lm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp----------------~ee~~~~~~~~~~~gl~-~i~li--aP~t~ 160 (267)
T 3vnd_A 100 LLLYANLVFANGIDEFYTKAQAAGVDSVLIADVP----------------VEESAPFSKAAKAHGIA-PIFIA--PPNAD 160 (267)
T ss_dssp EEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSC----------------GGGCHHHHHHHHHTTCE-EECEE--CTTCC
T ss_pred EEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCC----------------HhhHHHHHHHHHHcCCe-EEEEE--CCCCC
Confidence 2222232 244555555556699987663211 13456788999999986 43332 33455
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH-HHHhCCCE
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-GACAGARQ 309 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~~~--P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANala-Al~aGa~~ 309 (442)
.+.+.++++..... +..+.+..++|... |.++.++++.+|+... +|+.+ ++|....+... ++.+||+.
T Consensus 161 ~eri~~i~~~~~gf-vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~----~pv~v----GfGI~~~e~~~~~~~~gADg 231 (267)
T 3vnd_A 161 ADTLKMVSEQGEGY-TYLLSRAGVTGTESKAGEPIENILTQLAEFNA----PPPLL----GFGIAEPEQVRAAIKAGAAG 231 (267)
T ss_dssp HHHHHHHHHHCCSC-EEESCCCCCC--------CHHHHHHHHHTTTC----CCEEE----CSSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHhCCCc-EEEEecCCCCCCccCCcHHHHHHHHHHHHhcC----CCEEE----ECCcCCHHHHHHHHHcCCCE
Confidence 66665555442111 34445577778763 7778999999998752 55665 78888777777 99999998
Q ss_pred E
Q 013498 310 V 310 (442)
Q Consensus 310 v 310 (442)
|
T Consensus 232 v 232 (267)
T 3vnd_A 232 A 232 (267)
T ss_dssp E
T ss_pred E
Confidence 7
No 22
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.37 E-value=2.5e-06 Score=82.79 Aligned_cols=178 Identities=17% Similarity=0.190 Sum_probs=107.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChh-H---------------------HHHHHHHHHHhcccccccCCccceE
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-D---------------------FEAVRTIAKEVGNAVDAESGYVPVI 154 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d---------------------~e~v~~l~~~~~~~~~~~~~l~~~i 154 (442)
.++.++..++++.|.+.|+|.||+|.|.+.|- | ++.++.+.+...+ .|.+
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~--------~Pv~ 98 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT--------IPIG 98 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS--------SCEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC--------CCEE
Confidence 46678899999999999999999999876541 1 2345555443101 2322
Q ss_pred -ee-ecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCC
Q 013498 155 -CG-LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD 232 (442)
Q Consensus 155 -~~-~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d 232 (442)
.+ |.+.-.-.++..++....+|++.+.+..-. .+.+.+.++.++++|++.+.+..+ .++
T Consensus 99 lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~----------------~e~~~~~~~~~~~~g~~~i~l~~p---~t~ 159 (268)
T 1qop_A 99 LLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP----------------VEESAPFRQAALRHNIAPIFICPP---NAD 159 (268)
T ss_dssp EEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC----------------GGGCHHHHHHHHHTTCEEECEECT---TCC
T ss_pred EEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC----------------HHHHHHHHHHHHHcCCcEEEEECC---CCC
Confidence 21 222111122333333344588876653221 134557788899999853333222 256
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHH-HHhCCCE
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG-ACAGARQ 309 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~~~P--~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaA-l~aGa~~ 309 (442)
.+.+.++++..... +..+.+..++|..+| ..+.++++.+++... ++|.+ +.|...++.... +.+||+.
T Consensus 160 ~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~----~pi~v----ggGI~t~e~~~~~~~agAD~ 230 (268)
T 1qop_A 160 DDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYHA----APALQ----GFGISSPEQVSAAVRAGAAG 230 (268)
T ss_dssp HHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTTC----CCEEE----ESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhccC----CcEEE----ECCCCCHHHHHHHHHcCCCE
Confidence 67776666553211 334466678888544 557889999998752 55665 788886655544 9999988
Q ss_pred E
Q 013498 310 V 310 (442)
Q Consensus 310 v 310 (442)
|
T Consensus 231 v 231 (268)
T 1qop_A 231 A 231 (268)
T ss_dssp E
T ss_pred E
Confidence 6
No 23
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=98.26 E-value=9.7e-05 Score=73.72 Aligned_cols=219 Identities=16% Similarity=0.101 Sum_probs=142.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChh------H-HHHHHHHHHHhcccccccCCccceEeeecccchhhHHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKE------D-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 168 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~------d-~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 168 (442)
..++.++.++.++.+.+.|++.|-+... ..|. + .+.++.+.+..+ +...+. ......+.
T Consensus 89 ~~ls~eei~~~~~~~~~~G~~~i~l~gG-e~p~~~~~~~~~~~l~~~ik~~~~--------i~i~~s-~g~~~~e~---- 154 (350)
T 3t7v_A 89 YRLTMEEIKETCKTLKGAGFHMVDLTMG-EDPYYYEDPNRFVELVQIVKEELG--------LPIMIS-PGLMDNAT---- 154 (350)
T ss_dssp CBCCHHHHHHHHHHHTTSCCSEEEEEEC-CCHHHHHSTHHHHHHHHHHHHHHC--------SCEEEE-CSSCCHHH----
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEeeC-CCCccccCHHHHHHHHHHHHhhcC--------ceEEEe-CCCCCHHH----
Confidence 3489999999999999999998876322 1221 1 344454443321 111111 11123333
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCC
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Ga 248 (442)
++.++.+|++++.+.+-+.+-....+++.. ...+...+.++.+++.|+. |..++..+.--+++.+.+.++.+.+.++
T Consensus 155 l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~--~~~~~~l~~i~~a~~~Gi~-v~~~~i~Glget~e~~~~~l~~l~~l~~ 231 (350)
T 3t7v_A 155 LLKAREKGANFLALYQETYDTELYRKLRVG--QSFDGRVNARRFAKQQGYC-VEDGILTGVGNDIESTILSLRGMSTNDP 231 (350)
T ss_dssp HHHHHHTTEEEEECCCBCSCHHHHHHHSTT--CCHHHHHHHHHHHHHHTCE-EEEEEEESSSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEEeeecCCHHHHHHhCCC--CCHHHHHHHHHHHHHcCCe-EccceEeecCCCHHHHHHHHHHHHhCCC
Confidence 344566799888876666544455555432 2245556788999999985 6655543334567888899999999999
Q ss_pred cEEec------cCcc----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccc-
Q 013498 249 TTLNI------PDTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI- 317 (442)
Q Consensus 249 d~I~l------aDT~----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~Gl- 317 (442)
+.+.+ .+|- ...+++++.++++..|-.+|+. .++..++ .++......|+.+||+.+.+++..-
T Consensus 232 ~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~-~I~a~~~-----~~g~~~~~~~l~~Gan~~~~~~~~~~ 305 (350)
T 3t7v_A 232 DMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKR-LIPASLD-----LEGIDGMVLRLNAGANIVTSILPPDS 305 (350)
T ss_dssp SEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTS-BCEEEHH-----HHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCc-Ccccccc-----ccChhHHHHHHhcCCceecCCCCCCC
Confidence 87654 2432 2356678899999999888874 4666544 2334578899999999999998765
Q ss_pred ---cccc-------CcccHHHHHHHHHhcc
Q 013498 318 ---GERA-------GNASLEEVVMAFKCRG 337 (442)
Q Consensus 318 ---Gera-------GNa~lEevv~~L~~~g 337 (442)
|-.. ++.+.++++..++..|
T Consensus 306 ~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G 335 (350)
T 3t7v_A 306 QLEGVANYDRDLEERDRDIKSVVRRLEIMG 335 (350)
T ss_dssp CCCCSSCTTTTCSSCCCCHHHHHHHHHHHT
T ss_pred CCCCCCCCcccchhccCCHHHHHHHHHHcC
Confidence 2211 2457888888888775
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=97.99 E-value=1.8e-05 Score=73.24 Aligned_cols=173 Identities=18% Similarity=0.116 Sum_probs=104.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeeccc-chh-hHHHHHHHHHhC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-NER-DIKTAWEAVKYA 175 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~-~~~-dI~~a~e~l~~~ 175 (442)
.+.++.+++++.|. -|+|.||+|+|.....-.+.++.+++...+ .|....+.-. ..+ .++.+ ..+
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~~~~--------~~i~~~~~~~~~~~~~~~~~----~~~ 76 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEKYPH--------KEVLADAKIMDGGHFESQLL----FDA 76 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHHCTT--------SEEEEEEEECSCHHHHHHHH----HHT
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHhCCC--------CEEEEEEEeccchHHHHHHH----Hhc
Confidence 56899999999997 699999999874333335677877765211 1211111111 112 24444 446
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEecc-
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP- 254 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~la- 254 (442)
|++.|.+.....+ +.+.++++++++.|.+ +.+.+. +-.+ ..+.++.+.+.|+|.|++-
T Consensus 77 Gad~v~v~~~~~~---------------~~~~~~~~~~~~~g~~-~~v~~~--~~~t---~~~~~~~~~~~g~d~i~v~~ 135 (211)
T 3f4w_A 77 GADYVTVLGVTDV---------------LTIQSCIRAAKEAGKQ-VVVDMI--CVDD---LPARVRLLEEAGADMLAVHT 135 (211)
T ss_dssp TCSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEECT--TCSS---HHHHHHHHHHHTCCEEEEEC
T ss_pred CCCEEEEeCCCCh---------------hHHHHHHHHHHHcCCe-EEEEec--CCCC---HHHHHHHHHHcCCCEEEEcC
Confidence 9998877543221 3345778888889974 554321 1122 2456677888999998773
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 255 DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 255 DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
...|...+....+.++.+++.+++ +++.+ +.|....|...++++||+.|=
T Consensus 136 g~~g~~~~~~~~~~i~~l~~~~~~---~~i~~----~gGI~~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 136 GTDQQAAGRKPIDDLITMLKVRRK---ARIAV----AGGISSQTVKDYALLGPDVVI 185 (211)
T ss_dssp CHHHHHTTCCSHHHHHHHHHHCSS---CEEEE----ESSCCTTTHHHHHTTCCSEEE
T ss_pred CCcccccCCCCHHHHHHHHHHcCC---CcEEE----ECCCCHHHHHHHHHcCCCEEE
Confidence 111111111234677788887753 55554 456556788889999999873
No 25
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.84 E-value=0.00012 Score=70.38 Aligned_cols=170 Identities=19% Similarity=0.196 Sum_probs=103.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCCh---------------------h-HHHHHHHHHHHhcccccccCCccceEe
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASK---------------------E-DFEAVRTIAKEVGNAVDAESGYVPVIC 155 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~---------------------~-d~e~v~~l~~~~~~~~~~~~~l~~~i~ 155 (442)
++.++..++++.|.+.|+|.||+|.|.+.| + -++.++.+.+.. . .|.+
T Consensus 29 ~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~--------~-~Pv~- 98 (262)
T 1rd5_A 29 PDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL--------S-CPVV- 98 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC--------S-SCEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--------C-CCEE-
Confidence 445889999999999999999999886533 1 123344433321 1 2422
Q ss_pred eecccch---hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCC
Q 013498 156 GLSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD 232 (442)
Q Consensus 156 ~~~r~~~---~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d 232 (442)
...+.+. .+++.+. .+|++.|.+.... ++.+.+.++.++++|++ +.+.. +..++
T Consensus 99 ~m~~~~~~~~~~~~~a~----~aGadgv~v~d~~----------------~~~~~~~~~~~~~~g~~-~i~~~--a~~t~ 155 (262)
T 1rd5_A 99 LLSYYKPIMFRSLAKMK----EAGVHGLIVPDLP----------------YVAAHSLWSEAKNNNLE-LVLLT--TPAIP 155 (262)
T ss_dssp EECCSHHHHSCCTHHHH----HTTCCEEECTTCB----------------TTTHHHHHHHHHHTTCE-ECEEE--CTTSC
T ss_pred EEecCcHHHHHHHHHHH----HcCCCEEEEcCCC----------------hhhHHHHHHHHHHcCCc-eEEEE--CCCCC
Confidence 2222332 2344443 4589987763211 12355778889999985 33333 23455
Q ss_pred HHHHHHHHHHHHHcCCcEEe---ccCcccc--cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhC
Q 013498 233 RKFLYEILGEVIKVGATTLN---IPDTVGI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAG 306 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~---laDT~G~--~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aG 306 (442)
.+.+..+.+ .+.+.++ +..+.|. ..+....++++.+++..+ ++|.+ +.|.. ..|+.+.+.+|
T Consensus 156 ~e~~~~~~~----~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~----~pI~v----gGGI~~~e~~~~~~~~G 223 (262)
T 1rd5_A 156 EDRMKEITK----ASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN----KPVAV----GFGISKPEHVKQIAQWG 223 (262)
T ss_dssp HHHHHHHHH----HCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS----SCEEE----ESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHh----cCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC----CeEEE----ECCcCCHHHHHHHHHcC
Confidence 555544443 3333333 3454565 344567789999998762 55665 78888 66777778889
Q ss_pred CCEEEe
Q 013498 307 ARQVEV 312 (442)
Q Consensus 307 a~~vd~ 312 (442)
|+.|-+
T Consensus 224 AdgvvV 229 (262)
T 1rd5_A 224 ADGVII 229 (262)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999753
No 26
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.57 E-value=0.0002 Score=68.94 Aligned_cols=174 Identities=11% Similarity=0.080 Sum_probs=104.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChh-H----H-------------HHHHHHHHHhcccccccCCccc-eEeeecc
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKE-D----F-------------EAVRTIAKEVGNAVDAESGYVP-VICGLSR 159 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d----~-------------e~v~~l~~~~~~~~~~~~~l~~-~i~~~~r 159 (442)
+.+.-+++++.|.+.|+|.||+|+|.+.|- | . +.+-.+.+.... . .| .++++.-
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~------~-~Pivlm~Y~N 98 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKT------K-KALVFMVYYN 98 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCC------S-SEEEEECCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhc------C-CCEEEEeccC
Confidence 468889999999999999999999977651 1 1 111111111111 1 23 2333321
Q ss_pred cc-hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHH
Q 013498 160 CN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 238 (442)
Q Consensus 160 ~~-~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~ 238 (442)
.. .-++++.++..+++|++.+-+.. -+ .+...+..+.++++|+..|.+.. ..++.+.+.+
T Consensus 99 ~i~~~G~e~F~~~~~~aGvdG~IipD--LP--------------~eE~~~~~~~~~~~Gl~~I~lva---P~t~~eRi~~ 159 (252)
T 3tha_A 99 LIFSYGLEKFVKKAKSLGICALIVPE--LS--------------FEESDDLIKECERYNIALITLVS---VTTPKERVKK 159 (252)
T ss_dssp HHHHHCHHHHHHHHHHTTEEEEECTT--CC--------------GGGCHHHHHHHHHTTCEECEEEE---TTSCHHHHHH
T ss_pred HHHHhhHHHHHHHHHHcCCCEEEeCC--CC--------------HHHHHHHHHHHHHcCCeEEEEeC---CCCcHHHHHH
Confidence 11 34677777777778988875432 11 13355778889999996444332 3344555544
Q ss_pred HHHHHHHcCCcEEecc---CcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 239 ILGEVIKVGATTLNIP---DTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 239 ~~~~~~~~Gad~I~la---DT~G~~~P--~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
++ +.+-.-||+. -++|...+ .++.++++.+|+... +|+.+ .+|.......+++..+||.|
T Consensus 160 ia----~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~----~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 160 LV----KHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTN----LPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp HH----TTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCC----SCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred HH----HhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcC----CcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 44 4443444544 46676543 457899999998753 34444 46777777777777777775
No 27
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.49 E-value=0.014 Score=58.44 Aligned_cols=216 Identities=17% Similarity=0.142 Sum_probs=130.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCChhHHHHHHHHHHHhcccccccCCccceEe-eecccchhhHHHHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGF----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVIC-GLSRCNERDIKTAWE 170 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~-~~~r~~~~dI~~a~e 170 (442)
..++.++.++.++.+.+.|++.|-+|. |.. .+.+.+..+.+.+... ++ .++ ..+-...+.+ +
T Consensus 97 ~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~--~~~~~l~~ll~~ik~~-----g~--~i~~t~G~l~~e~l----~ 163 (369)
T 1r30_A 97 RLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHE--RDMPYLEQMVQGVKAM-----GL--EACMTLGTLSESQA----Q 163 (369)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT--TTHHHHHHHHHHHHHT-----TS--EEEEECSSCCHHHH----H
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc--CCHHHHHHHHHHHHHc-----CC--eEEEecCCCCHHHH----H
Confidence 457999999999999999999887743 432 2233333333332211 11 122 1111233333 4
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC--C
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG--A 248 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G--a 248 (442)
.++.+|++++.+.+-+++-... +++.+ ...+...+.++.+++.|+ .|..++..+-.-+.+.+.+.++.+.+.+ +
T Consensus 164 ~L~~aGvd~v~i~les~~e~~~-~i~~~--~~~~~~l~~i~~a~~~Gi-~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~ 239 (369)
T 1r30_A 164 RLANAGLDYYNHNLDTSPEFYG-NIITT--RTYQERLDTLEKVRDAGI-KVCSGGIVGLGETVKDRAGLLLQLANLPTPP 239 (369)
T ss_dssp HHHHHCCCEEECCCBSCHHHHH-HHCCS--SCHHHHHHHHHHHHHHHC-EEECCEEECSSCCHHHHHHHHHHHHSSSSCC
T ss_pred HHHHCCCCEEeecCcCCHHHHH-HhCCC--CCHHHHHHHHHHHHHcCC-eeeeeeEeeCCCCHHHHHHHHHHHHhhcCCC
Confidence 4455699999987777654443 34331 123455677888888898 4665543333346788889999999987 6
Q ss_pred cEEec------cCc----ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 249 TTLNI------PDT----VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 249 d~I~l------aDT----~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
+.+.+ ++| .....+++..++++..+..+|.. .+.+..-..| +| -.....++.+||+.+ +. |
T Consensus 240 ~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~-~i~i~~~~~~-l~--~~~~~~~l~~Gan~~---~~--g 310 (369)
T 1r30_A 240 ESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS-YVRLSAGREQ-MN--EQTQAMCFMAGANSI---FY--G 310 (369)
T ss_dssp SEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS-EEEEESSGGG-SC--HHHHHHHHHHTCCEE---EC--S
T ss_pred CEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC-ceEeecchhh-cC--hHHHHHHhhCCCceE---Ee--C
Confidence 66553 344 12356788899999999988852 1233311121 22 233566899999943 22 3
Q ss_pred cc---cCcccHHHHHHHHHhcc
Q 013498 319 ER---AGNASLEEVVMAFKCRG 337 (442)
Q Consensus 319 er---aGNa~lEevv~~L~~~g 337 (442)
+| ++|.+.++.+..++..|
T Consensus 311 ~~~~t~~~~~~~~~~~~i~~~g 332 (369)
T 1r30_A 311 CKLLTTPNPEEDKDLQLFRKLG 332 (369)
T ss_dssp SBSSSSBCCCHHHHHHHHHHTT
T ss_pred CeeeCCCCCCHHHHHHHHHHcC
Confidence 43 36788888888888764
No 28
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=97.36 E-value=0.03 Score=55.16 Aligned_cols=191 Identities=18% Similarity=0.094 Sum_probs=120.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEc--c-CCCChhH-HHHHHHHHHHhcccccccCCccceEe-eecccchhhHHHHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAG--F-PAASKED-FEAVRTIAKEVGNAVDAESGYVPVIC-GLSRCNERDIKTAWE 170 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG--~-p~~~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~-~~~r~~~~dI~~a~e 170 (442)
..++.++.++.++.+.+.|++.|-++ - |....++ .+.++.+.+. ++ .+. ..+..+.+.++.
T Consensus 82 ~~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~---------~~--~i~~s~g~l~~e~l~~--- 147 (348)
T 3iix_A 82 YRMTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM---------GV--AVTLSLGEWPREYYEK--- 147 (348)
T ss_dssp CBCCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT---------SC--EEEEECCCCCHHHHHH---
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc---------Cc--eEEEecCCCCHHHHHH---
Confidence 34799999999999999999987774 2 3222122 2344444332 11 121 112234444444
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHHHcCCc
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKVGAT 249 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~~~Gad 249 (442)
++.+|++++.+.+-+.+-....+++... ..+...+.++.+++.|+. |..++.... ..+.+.+.+.++.+.+.|++
T Consensus 148 -L~~ag~~~v~i~let~~~~~~~~i~~~~--~~~~~~~~i~~~~~~Gi~-v~~~~i~G~p~et~e~~~~~~~~l~~l~~~ 223 (348)
T 3iix_A 148 -WKEAGADRYLLRHETANPVLHRKLRPDT--SFENRLNCLLTLKELGYE-TGAGSMVGLPGQTIDDLVDDLLFLKEHDFD 223 (348)
T ss_dssp -HHHHTCCEEECCCBCSCHHHHHHHSTTS--CHHHHHHHHHHHHHTTCE-EEECBEESCTTCCHHHHHHHHHHHHHHTCS
T ss_pred -HHHhCCCEEeeeeeeCCHHHHHHhCCCc--CHHHHHHHHHHHHHhCCe-eccceEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 3445899988776666444444554322 355666788899999984 766654333 45788899999999999988
Q ss_pred EEec------cCcc----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch---HHHHHHHHHHhCCCEEE
Q 013498 250 TLNI------PDTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL---STANTIAGACAGARQVE 311 (442)
Q Consensus 250 ~I~l------aDT~----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL---A~ANalaAl~aGa~~vd 311 (442)
.+.+ ++|- ....++++.++++.+|..+|+. .+++ ..++ .......|+.+||+.|-
T Consensus 224 ~i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~-~i~~------~~~~~~~~~~~~~~~l~~Gan~i~ 291 (348)
T 3iix_A 224 MVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDS-NIPA------TTAMGTIVPGGREITLRCGANVIM 291 (348)
T ss_dssp EECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTS-BCBC------CHHHHHHSTTHHHHHHTTTCCEEC
T ss_pred EEeeeeeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCC-Cchh------cchhhhcCHHHHHHHHhcCCcEEe
Confidence 6553 3442 2356788999999999888863 1222 1121 11234578999999986
No 29
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.03 E-value=0.015 Score=53.22 Aligned_cols=167 Identities=22% Similarity=0.177 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccc-hhh-HHHHHHHHHhC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERD-IKTAWEAVKYA 175 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~-~~d-I~~a~e~l~~~ 175 (442)
.+.++-+++++.|.+ |++.||+|.|.....-.+.++.+.+..++ .+.+..+...+ .+. ++.+ ..+
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~--------~~i~~~l~~~di~~~~~~~a----~~~ 76 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKAHPD--------KIVFADMKTMDAGELEADIA----FKA 76 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTT--------SEEEEEEEECSCHHHHHHHH----HHT
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCC--------CeEEEEEEecCccHHHHHHH----HhC
Confidence 468899999999998 99999999864222224567777665311 13344444334 233 3434 446
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE-ec-
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NI- 253 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I-~l- 253 (442)
|.+.|.+.....+ +.+.++++++++.|.. +.+.+ .+..+++.. ++.+.+.|+|.| ..
T Consensus 77 Gad~v~vh~~~~~---------------~~~~~~~~~~~~~g~~-~gv~~--~s~~~p~~~---~~~~~~~g~d~v~~~~ 135 (207)
T 3ajx_A 77 GADLVTVLGSADD---------------STIAGAVKAAQAHNKG-VVVDL--IGIEDKATR---AQEVRALGAKFVEMHA 135 (207)
T ss_dssp TCSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEEC--TTCSSHHHH---HHHHHHTTCSEEEEEC
T ss_pred CCCEEEEeccCCh---------------HHHHHHHHHHHHcCCc-eEEEE--ecCCChHHH---HHHHHHhCCCEEEEEe
Confidence 9998876544332 1233566777778874 54433 133355542 334455689987 32
Q ss_pred cCc---ccccCHHHHHHHHHHHHH-hCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 254 PDT---VGITMPTEFGKLIADIKA-NTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 254 aDT---~G~~~P~~v~~li~~l~~-~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
+-+ .|. .|.+ +.++.++. ..| +.+= -|.-..|.-.++++||+.|=
T Consensus 136 ~~~~~~~g~-~~~~--~~i~~~~~~~~p------i~v~----GGI~~~~~~~~~~aGad~vv 184 (207)
T 3ajx_A 136 GLDEQAKPG-FDLN--GLLAAGEKARVP------FSVA----GGVKVATIPAVQKAGAEVAV 184 (207)
T ss_dssp CHHHHTSTT-CCTH--HHHHHHHHHTSC------EEEE----SSCCGGGHHHHHHTTCSEEE
T ss_pred cccccccCC-CchH--HHHHHhhCCCCC------EEEE----CCcCHHHHHHHHHcCCCEEE
Confidence 111 232 3444 56666665 332 3322 23333488889999999763
No 30
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.67 E-value=0.06 Score=50.56 Aligned_cols=168 Identities=18% Similarity=0.179 Sum_probs=95.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhH----------------------HHHHHHHHHHhcccccccCCccceE
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKED----------------------FEAVRTIAKEVGNAVDAESGYVPVI 154 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d----------------------~e~v~~l~~~~~~~~~~~~~l~~~i 154 (442)
..+.++-.+.++.|.+. +|.||++.|.+.|.. .+.++.+.+.. . .|..
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--------~-~pv~ 84 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--------S-TPIV 84 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--------C-CCEE
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--------C-CCEE
Confidence 34557889999999999 999999988544311 23344443321 1 1322
Q ss_pred eeecccc-------hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC
Q 013498 155 CGLSRCN-------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 227 (442)
Q Consensus 155 ~~~~r~~-------~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed 227 (442)
. ....+ .+.++.++++ |++.|.+..- .. +...+.++++++.|.+ +.+...
T Consensus 85 ~-~~~~~~~~~~~~~~~~~~~~~~----Gad~v~~~~~-~~---------------~~~~~~~~~~~~~g~~-~~~~i~- 141 (248)
T 1geq_A 85 L-MTYYNPIYRAGVRNFLAEAKAS----GVDGILVVDL-PV---------------FHAKEFTEIAREEGIK-TVFLAA- 141 (248)
T ss_dssp E-EECHHHHHHHCHHHHHHHHHHH----TCCEEEETTC-CG---------------GGHHHHHHHHHHHTCE-EEEEEC-
T ss_pred E-EeccchhhhcCHHHHHHHHHHC----CCCEEEECCC-Ch---------------hhHHHHHHHHHHhCCC-eEEEEC-
Confidence 2 22223 3555655554 8999887421 11 2244677888889975 555441
Q ss_pred CCCCCHHHHHHHHHHHHHcCCc-EEeccCccccc-----CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGAT-TLNIPDTVGIT-----MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTI 300 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad-~I~laDT~G~~-----~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~-ANal 300 (442)
..+..+.+..+. + +++ .|++-...|.. .+....++++.+++.+. ++|.+ +-|... .|..
T Consensus 142 -~~t~~e~~~~~~----~-~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~----~pi~~----~GGI~~~e~i~ 207 (248)
T 1geq_A 142 -PNTPDERLKVID----D-MTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR----NKVAV----GFGVSKREHVV 207 (248)
T ss_dssp -TTCCHHHHHHHH----H-HCSSEEEEECCC-------CCCHHHHHHHHHHHHHCS----SCEEE----ESCCCSHHHHH
T ss_pred -CCCHHHHHHHHH----h-cCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC----CCEEE----EeecCCHHHHH
Confidence 123444443332 2 255 66555444422 23456678888888652 33332 356666 6777
Q ss_pred HHHHhCCCEEE
Q 013498 301 AGACAGARQVE 311 (442)
Q Consensus 301 aAl~aGa~~vd 311 (442)
..+.+||+.|-
T Consensus 208 ~~~~~Gad~vi 218 (248)
T 1geq_A 208 SLLKEGANGVV 218 (248)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEE
Confidence 77799999874
No 31
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.51 E-value=0.014 Score=55.38 Aligned_cols=155 Identities=15% Similarity=0.149 Sum_probs=101.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee-cccchhhHHHHHHHHHhCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-SRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~-~r~~~~dI~~a~e~l~~~g 176 (442)
-+.++..++++.|.+.|++.||+.+ .+++..+.++++++..+.- +.+. +-.+.++++.++++ |
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~--~t~~a~e~I~~l~~~~~~~----------~iGaGTVlt~~~a~~Ai~A----G 106 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITF--RSDAAVEAIRLLRQAQPEM----------LIGAGTILNGEQALAAKEA----G 106 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TSTTHHHHHHHHHHHCTTC----------EEEEECCCSHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC--CCCCHHHHHHHHHHhCCCC----------EEeECCcCCHHHHHHHHHc----C
Confidence 4578899999999999999999966 3566678888888764321 1121 22367778888776 8
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT 256 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT 256 (442)
.+.|.. |..+ .+.++++++.|+. +.-++ .++.++. .+.++|+|.|.+-=+
T Consensus 107 A~fIvs--P~~~------------------~~vi~~~~~~gi~-~ipGv-----~TptEi~----~A~~~Gad~vK~FPa 156 (232)
T 4e38_A 107 ATFVVS--PGFN------------------PNTVRACQEIGID-IVPGV-----NNPSTVE----AALEMGLTTLKFFPA 156 (232)
T ss_dssp CSEEEC--SSCC------------------HHHHHHHHHHTCE-EECEE-----CSHHHHH----HHHHTTCCEEEECST
T ss_pred CCEEEe--CCCC------------------HHHHHHHHHcCCC-EEcCC-----CCHHHHH----HHHHcCCCEEEECcC
Confidence 887753 3221 2466778888874 33333 2455443 446899998877221
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 013498 257 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (442)
Q Consensus 257 ~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~ 309 (442)
+ .. .=.++++.++.-+|+ +++-. .=|....|+-..+.+|+..
T Consensus 157 -~-~~--gG~~~lkal~~p~p~---ip~~p----tGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 157 -E-AS--GGISMVKSLVGPYGD---IRLMP----TGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp -T-TT--THHHHHHHHHTTCTT---CEEEE----BSSCCTTTHHHHHTSTTBC
T ss_pred -c-cc--cCHHHHHHHHHHhcC---CCeee----EcCCCHHHHHHHHHCCCeE
Confidence 1 00 013788888887875 45543 2355567888999999754
No 32
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.39 E-value=0.78 Score=44.43 Aligned_cols=194 Identities=13% Similarity=0.123 Sum_probs=117.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|.+.+-.+.++ ++.+-
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 90 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVAN-------KRIPIIAGTGANSTREAIELTK 90 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCCCHHHHHHHHH
Confidence 478888899999999999998876 3 344455564 45555555542 2357788877644444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
..+.+|++.+-+..|-. ++.+.++.++-..+.++. .++.-+-++.+. ....+++.+.+++ +.
T Consensus 91 -~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 154 (291)
T 3tak_A 91 -AAKDLGADAALLVTPYY-------NKPTQEGLYQHYKAIAEA---VELPLILYNVPGRTGVDLSNDTAVRLA----EI- 154 (291)
T ss_dssp -HHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSCCCCHHHHHHHT----TS-
T ss_pred -HHHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCCHHHHHHHH----cC-
Confidence 33456999887665532 244666666655555443 355544555432 3456677666554 33
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++... ++ ..+ +-+++ ...+.++..|++.+ +. ..+|...+
T Consensus 155 pnivgiK~ssgd--~~~~~~~~~~~~---~~---f~v-~~G~d------~~~~~~l~~G~~G~---is----~~~n~~P~ 212 (291)
T 3tak_A 155 PNIVGIKDATGD--VPRGKALIDALN---GK---MAV-YSGDD------ETAWELMLLGADGN---IS----VTANIAPK 212 (291)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHHT---TS---SEE-EECCH------HHHHHHHHTTCCEE---EE----SGGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHHcC---CC---eEE-EECcH------HHHHHHHHCCCCEE---Ee----chhhhcHH
Confidence 578999999874 456666665443 22 222 22332 33577888998654 32 24677777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 213 ~~~~l~~a 220 (291)
T 3tak_A 213 AMSEVCAV 220 (291)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665553
No 33
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.34 E-value=0.027 Score=52.77 Aligned_cols=153 Identities=16% Similarity=0.188 Sum_probs=101.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
..+.++.+.+++.|.+.|++.||+.+ .+|.-.+.++.+++..+. ..|-+=+-.+.++++.++++ |
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~--~t~~a~~~I~~l~~~~p~---------~~IGAGTVlt~~~a~~ai~A----G 85 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTL--RTEAGLAAISAIKKAVPE---------AIVGAGTVCTADDFQKAIDA----G 85 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEET--TSTTHHHHHHHHHHHCTT---------SEEEEECCCSHHHHHHHHHH----T
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeC--CCccHHHHHHHHHHHCCC---------CeEeeccccCHHHHHHHHHc----C
Confidence 35778999999999999999999976 356667889998886532 11211123477888888876 7
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC------CeEEEccCCCCCCCHHHHHHHHHHHHHcCCcE
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC------DDVEFSPEDAGRSDRKFLYEILGEVIKVGATT 250 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~------~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~ 250 (442)
.+.+.. |..+ .+.++++++.|+ . +.=++ .+++++. .+.++|+|.
T Consensus 86 A~fivs--P~~~------------------~evi~~~~~~~v~~~~~~~-~~PG~-----~TptE~~----~A~~~Gad~ 135 (217)
T 3lab_A 86 AQFIVS--PGLT------------------PELIEKAKQVKLDGQWQGV-FLPGV-----ATASEVM----IAAQAGITQ 135 (217)
T ss_dssp CSEEEE--SSCC------------------HHHHHHHHHHHHHCSCCCE-EEEEE-----CSHHHHH----HHHHTTCCE
T ss_pred CCEEEe--CCCc------------------HHHHHHHHHcCCCccCCCe-EeCCC-----CCHHHHH----HHHHcCCCE
Confidence 776642 3221 146677888775 3 22122 3444443 456899999
Q ss_pred EeccCcccccCHHHH---HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 013498 251 LNIPDTVGITMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (442)
Q Consensus 251 I~laDT~G~~~P~~v---~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~ 308 (442)
|.+ .|.+. .++++.++.-+|+ +++-.=. |.-..|.-..+.+|+.
T Consensus 136 vK~-------FPa~~~gG~~~lkal~~p~p~---i~~~ptG----GI~~~N~~~~l~aGa~ 182 (217)
T 3lab_A 136 LKC-------FPASAIGGAKLLKAWSGPFPD---IQFCPTG----GISKDNYKEYLGLPNV 182 (217)
T ss_dssp EEE-------TTTTTTTHHHHHHHHHTTCTT---CEEEEBS----SCCTTTHHHHHHSTTB
T ss_pred EEE-------CccccccCHHHHHHHHhhhcC---ceEEEeC----CCCHHHHHHHHHCCCE
Confidence 876 34432 4788999988875 4554433 3334688888999974
No 34
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=96.33 E-value=0.18 Score=49.36 Aligned_cols=165 Identities=19% Similarity=0.275 Sum_probs=90.3
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCC----ChhHHHHHHHHHHHhcccccccC
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAA----SKEDFEAVRTIAKEVGNAVDAES 148 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~----~~~d~e~v~~l~~~~~~~~~~~~ 148 (442)
|.-.-|+-+|. |-..--|..++.+..++.++.+.+.|-++|.+|. |.+ .++|++.+..+.+.+...
T Consensus 29 ~~iMGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~----- 102 (294)
T 2dqw_A 29 VRLLGVLNLTP-DSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL----- 102 (294)
T ss_dssp CEEEEEEECCC--------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT-----
T ss_pred ceEEEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC-----
Confidence 33455777776 5443334557888899999999999999999996 332 134555444433333211
Q ss_pred CccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC-
Q 013498 149 GYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED- 227 (442)
Q Consensus 149 ~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed- 227 (442)
. +| |+ .--.+.+-++.|+++ |.+.|+ .+|- .. ..++++.+++.|+. +.....+
T Consensus 103 ~-vp-iS-IDT~~~~Va~aAl~a----Ga~iIN---dVsg--------~~-------d~~m~~v~a~~~~~-vVlmh~~e 156 (294)
T 2dqw_A 103 G-VP-VS-VDTRKPEVAEEALKL----GAHLLN---DVTG--------LR-------DERMVALAARHGVA-AVVMHMPV 156 (294)
T ss_dssp C-SC-EE-EECSCHHHHHHHHHH----TCSEEE---CSSC--------SC-------CHHHHHHHHHHTCE-EEEECCSS
T ss_pred C-Ce-EE-EECCCHHHHHHHHHh----CCCEEE---ECCC--------CC-------ChHHHHHHHHhCCC-EEEEcCCC
Confidence 1 12 22 122356667777776 777654 4442 11 11456677888885 5543333
Q ss_pred CC-CC--------C-----HHHHHHHHHHHHHcCCcEEeccCc-ccccC-HHHHHHHHHHHHH
Q 013498 228 AG-RS--------D-----RKFLYEILGEVIKVGATTLNIPDT-VGITM-PTEFGKLIADIKA 274 (442)
Q Consensus 228 as-r~--------d-----~~~l~~~~~~~~~~Gad~I~laDT-~G~~~-P~~v~~li~~l~~ 274 (442)
.. ++ | .+++.+.++.+.++|++.|.| |. +|... .++-.++++.+++
T Consensus 157 G~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~Iil-DPG~Gf~kt~~~n~~ll~~l~~ 218 (294)
T 2dqw_A 157 PDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVL-DPGFGFGKLLEHNLALLRRLDE 218 (294)
T ss_dssp SCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEE-ECCTTSSCCHHHHHHHHHTHHH
T ss_pred CCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEE-cCCCCcccCHHHHHHHHHHHHH
Confidence 11 11 1 458888889999999985555 53 24444 5667777777755
No 35
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=96.31 E-value=0.082 Score=51.14 Aligned_cols=202 Identities=9% Similarity=0.048 Sum_probs=106.1
Q ss_pred HHHHHHhHcCCCEEEEccCCCChh--------HHHHHHHHHHHhcccccccCCccc-eEe-e--------ecccch----
Q 013498 105 DIARQLAKLGVDIIEAGFPAASKE--------DFEAVRTIAKEVGNAVDAESGYVP-VIC-G--------LSRCNE---- 162 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~p~~~~~--------d~e~v~~l~~~~~~~~~~~~~l~~-~i~-~--------~~r~~~---- 162 (442)
.+.+.+.++|++.||+......+. +.+.++.+.+..+ +.. .+. + ++..++
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--------l~i~~~~~~~~~~~~~~l~~~d~~~r~ 110 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAG--------LTIESTFGGLASYTYNHFLAPTLELQS 110 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTT--------CEEEEEECCHHHHTSCBTTCSSHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcC--------CeEEEeeccccccccccCCCCCHHHHH
Confidence 356677899999999965322221 3444555444322 211 111 1 111111
Q ss_pred ---hhHHHHHHHHHhCCCCEEEEeecC-ChHHH--HHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC---CCCH
Q 013498 163 ---RDIKTAWEAVKYAKRPRIHTFIAT-SGIHM--EHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG---RSDR 233 (442)
Q Consensus 163 ---~dI~~a~e~l~~~g~~~v~i~~~~-Sd~h~--~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas---r~d~ 233 (442)
+.++++++.....|.+.|.+.... +.-.. ........+..++.+.+++++|++.|+..+.+-.+... -.++
T Consensus 111 ~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~ 190 (316)
T 3qxb_A 111 LGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSA 190 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCH
Confidence 234556666677899888653322 10000 00000123456777888899999999731444221122 2457
Q ss_pred HHHHHHHHHHHHcCCcEEecc-CcccccC------HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC
Q 013498 234 KFLYEILGEVIKVGATTLNIP-DTVGITM------PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 306 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~la-DT~G~~~------P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG 306 (442)
+.+.++++.+.+.+.+.+.++ ||.=... -....+.++.+.. -...+|.++..+-
T Consensus 191 ~~~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~-------~i~~vHlkD~~~~------------ 251 (316)
T 3qxb_A 191 ADAARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQP-------WIAAYHIQQTDGQ------------ 251 (316)
T ss_dssp HHHHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGG-------GEEEEEECBCCSS------------
T ss_pred HHHHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHh-------hheEEeeecCCCC------------
Confidence 778888877754455555443 6632222 0122333444432 2468999986652
Q ss_pred CCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 307 ARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 307 a~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
.+. +-.+ .|+ |..+.+.++..|+..|.
T Consensus 252 ~d~-h~~~--~G~--G~id~~~i~~~L~~~gy 278 (316)
T 3qxb_A 252 LDR-HWSF--TQP--GVVTPQRLQDFWDKYAL 278 (316)
T ss_dssp SCC-CBCT--TSC--SSCCHHHHHHHHHHTTC
T ss_pred cCc-cCCC--CCC--ceECHHHHHHHHHHcCC
Confidence 010 0011 243 89999999999998764
No 36
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=96.29 E-value=0.47 Score=44.46 Aligned_cols=233 Identities=12% Similarity=0.085 Sum_probs=117.7
Q ss_pred HHHHHHHhHcCCCEEEEc--cCC------CChhHHHHHHHHHHHhcccccccCCccceEeeecccc-------hhhHHHH
Q 013498 104 LDIARQLAKLGVDIIEAG--FPA------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-------ERDIKTA 168 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG--~p~------~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~-------~~dI~~a 168 (442)
.+.++.+.++|++.||+. .|. .++++.+.++.+.+..+-.+.......|...-++..+ .+.++.+
T Consensus 15 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~ 94 (285)
T 1qtw_A 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDE 94 (285)
T ss_dssp HHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHH
Confidence 345666778899999992 121 2234566666665543322100000000000111111 1234555
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHH--HHcCCCeEEEccCCCC------CCCHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFA--RSLGCDDVEFSPEDAG------RSDRKFLYEIL 240 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a--r~~G~~~V~f~~edas------r~d~~~l~~~~ 240 (442)
++.....|.+.|.+...... ...+.++.++++.+.++.+ ++.|+ .+..|... -.+++.+.+++
T Consensus 95 i~~A~~lGa~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~a~~~gv---~l~lEn~~~~~~~~~~~~~~~~~l~ 165 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGSHL------MQISEEDCLARIAESINIALDKTQGV---TAVIENTAGQGSNLGFKFEHLAAII 165 (285)
T ss_dssp HHHHHHTTCCEEEECCCBCT------TTSCHHHHHHHHHHHHHHHHHHCSSC---EEEEECCCCCTTBCCSSHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHhccCCC---EEEEecCCCCCCcccCCHHHHHHHH
Confidence 66666779888876543221 1125666666666665543 33454 33333221 13677777777
Q ss_pred HHHHHcCCcEEec-cCcc-----c--ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 241 GEVIKVGATTLNI-PDTV-----G--ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 241 ~~~~~~Gad~I~l-aDT~-----G--~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
+.+. +.+.+.+ -||. | ...|+.+.+.++.+.+..+. +-...+|.|+..+- .|... |
T Consensus 166 ~~v~--~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~--~~i~~vH~~D~~~~----------~~~~~-~- 229 (285)
T 1qtw_A 166 DGVE--DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGF--KYLRGMHLNDAKST----------FGSRV-D- 229 (285)
T ss_dssp HHCS--CGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTCCC-C-
T ss_pred Hhhc--CccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCc--cceeEEEEecCCCc----------ccCCc-c-
Confidence 6551 2222222 2652 3 23456777788888766531 13578999976541 01100 0
Q ss_pred cccccccccCcccHHHHHHHHHhcccccc-CCccCCCChhHHHHHHHHHHHHh
Q 013498 313 TINGIGERAGNASLEEVVMAFKCRGEHIL-GGLYTGINTRHIVMASKMVEEYT 364 (442)
Q Consensus 313 Tv~GlGeraGNa~lEevv~~L~~~g~~~~-~G~~tgidl~~L~~ls~~v~~~~ 364 (442)
.-..+| .|..+.+.++..|+..+.+.. ..++. .+.+.+.+-.+++.++.
T Consensus 230 ~h~~~G--~G~id~~~~~~~L~~~gy~g~~~~lE~-~~~~~~~~s~~~lr~~~ 279 (285)
T 1qtw_A 230 RHHSLG--EGNIGHDAFRWIMQDDRFDGIPLILET-INPDIWAEEIAWLKAQQ 279 (285)
T ss_dssp CEECTT--TSSSCSHHHHHHHTCGGGTTSEEEECC-SCGGGHHHHHHHHHHHT
T ss_pred cccCCC--CCCCCHHHHHHHHhccCcCCCCEEEec-CCCcchHHHHHHHHHHH
Confidence 001234 388999999999987653210 12232 24456666566666554
No 37
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.28 E-value=0.49 Score=46.51 Aligned_cols=227 Identities=18% Similarity=0.116 Sum_probs=130.9
Q ss_pred HHHHhHcCCCEEEE-c---------cCCCCh----hHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 107 ARQLAKLGVDIIEA-G---------FPAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 107 a~~L~~~GV~~IEv-G---------~p~~~~----~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
++.++++|++.|=+ | +|.... +..+.++.+++... .-.|.++ ||+ +...+.+.
T Consensus 38 A~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~-------~~~PviaD~d~Gyg--~~~~v~~~ 108 (307)
T 3lye_A 38 ARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDP-------FGPPLIADMDTGYG--GPIMVART 108 (307)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSST-------TSCCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCC-------CCCcEEEECCCCCC--CHHHHHHH
Confidence 66778899999987 4 242222 22334444443211 0123333 343 45556666
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~ 244 (442)
.+.+..+|+..|++-..+.+- |+..+-=.+.++.+++++.+++.+++.|.+.+...=.|+. ....+..++-++...
T Consensus 109 v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~ 188 (307)
T 3lye_A 109 VEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAAR 188 (307)
T ss_dssp HHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHH
Confidence 666777899999998877653 3332222478899999888877777677542222111221 123566777778888
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcc
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa 324 (442)
++|||.|.+. |.-.++++.++.+.+. .+| +.+-+-.......-. .-.--+.|++.|-. ....-|+-+.
T Consensus 189 eAGAD~ifi~---~~~~~~~~~~i~~~~~-~~P----v~~n~~~~g~~p~~t--~~eL~~lGv~~v~~--~~~~~raa~~ 256 (307)
T 3lye_A 189 DEGADVGLLE---GFRSKEQAAAAVAALA-PWP----LLLNSVENGHSPLIT--VEEAKAMGFRIMIF--SFATLAPAYA 256 (307)
T ss_dssp HTTCSEEEEC---CCSCHHHHHHHHHHHT-TSC----BEEEEETTSSSCCCC--HHHHHHHTCSEEEE--ETTTHHHHHH
T ss_pred HCCCCEEEec---CCCCHHHHHHHHHHcc-CCc----eeEEeecCCCCCCCC--HHHHHHcCCeEEEE--ChHHHHHHHH
Confidence 9999999886 6788999998888875 133 333222221111111 23444569999833 3333467778
Q ss_pred cHHHHHHHHHhccccccCCccCCCChhHHHHHH
Q 013498 325 SLEEVVMAFKCRGEHILGGLYTGINTRHIVMAS 357 (442)
Q Consensus 325 ~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls 357 (442)
++++.+..|...|.. +.+..+..+.|+++-
T Consensus 257 a~~~~~~~l~~~g~~---~~~~~~~~~el~~~~ 286 (307)
T 3lye_A 257 AIRETLVRLRDHGVV---GTPDGITPVRLFEVC 286 (307)
T ss_dssp HHHHHHHHHHHHSCC---CCCTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHhCCC---CccccCCHHHHHHhc
Confidence 888888888776522 223334455555543
No 38
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=96.01 E-value=0.093 Score=51.75 Aligned_cols=138 Identities=18% Similarity=0.197 Sum_probs=86.3
Q ss_pred eEEEeCCCC---cC--CCCCCCCCCH-HHHHHHHHHHhHcCCCEEEEcc----CCC---C-hhHHHHHHHHHHHhccccc
Q 013498 80 VRVFDTTLR---DG--EQSPGATLTS-KEKLDIARQLAKLGVDIIEAGF----PAA---S-KEDFEAVRTIAKEVGNAVD 145 (442)
Q Consensus 80 V~I~DtTLR---DG--~Q~~g~~fs~-e~kl~ia~~L~~~GV~~IEvG~----p~~---~-~~d~e~v~~l~~~~~~~~~ 145 (442)
+.|+|+|.= || ++. .+. +..++.++.+.+.|.|+|.+|. |.. + +++.+.++.+.+...
T Consensus 51 m~I~n~tpdsf~d~i~~~~----~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~---- 122 (310)
T 2h9a_B 51 LEVFDTPPTDWPDILVEPF----KDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAID---- 122 (310)
T ss_dssp EEEESSCCSSCCHHHHGGG----TTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCS----
T ss_pred EEEeeCCCcccchhhhhhh----ccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCC----
Confidence 679999873 55 322 222 6778889999999999999986 432 2 234567777766421
Q ss_pred ccCCccceEeeecc----cchhhHHHHHHHHHhCCCC---EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC
Q 013498 146 AESGYVPVICGLSR----CNERDIKTAWEAVKYAKRP---RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGC 218 (442)
Q Consensus 146 ~~~~l~~~i~~~~r----~~~~dI~~a~e~l~~~g~~---~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~ 218 (442)
+| |+.|-- .+.+-++.++++ |.+ .|+ ++|.. +..++++.+++.|.
T Consensus 123 -----vp-lsI~DT~~~~~~~~V~eaal~a----ga~~k~iIN---dvs~~---------------~~~~~~~~aa~~g~ 174 (310)
T 2h9a_B 123 -----VP-LMIIGCGVEEKDAEIFPVIGEA----LSGRNCLLS---SATKD---------------NYKPIVATCMVHGH 174 (310)
T ss_dssp -----SC-EEEECCSCHHHHHHHHHHHHHH----TTTSCCEEE---EECTT---------------THHHHHHHHHHHTC
T ss_pred -----ce-EEEECCCCCCCCHHHHHHHHHh----CCCCCCEEE---ECCCC---------------ccHHHHHHHHHhCC
Confidence 23 333233 345566777776 333 443 33320 12356677788888
Q ss_pred CeEEEccCCCCCCCHHHHHHHHHHHHHcCC--cEEeccCccc
Q 013498 219 DDVEFSPEDAGRSDRKFLYEILGEVIKVGA--TTLNIPDTVG 258 (442)
Q Consensus 219 ~~V~f~~edasr~d~~~l~~~~~~~~~~Ga--d~I~laDT~G 258 (442)
. |....+. |.+++.++++.+.++|+ +.|.|==.+|
T Consensus 175 ~-vv~m~~~----dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 175 S-VVASAPL----DINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp E-EEEECSS----CHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred C-EEEEChh----HHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 5 5544331 57999999999999998 5666633445
No 39
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=95.96 E-value=0.66 Score=45.73 Aligned_cols=197 Identities=17% Similarity=0.191 Sum_probs=108.7
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCC--------hhHHHHHHHHHHHhccccccc
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS--------KEDFEAVRTIAKEVGNAVDAE 147 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~--------~~d~e~v~~l~~~~~~~~~~~ 147 (442)
.-|+-+|. |-..- ..++.+..++.++.+.+.|-++|.+|. |.+. ++|++.+..+.+.+....
T Consensus 31 MGIlNvTp-DSFsd--~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--- 104 (314)
T 3tr9_A 31 MGIINVSP-NSFYH--PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--- 104 (314)
T ss_dssp EEEEECST-TCSBC--BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEeCCC-Cchhh--ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC---
Confidence 45777776 33322 456899999999999999999999996 4433 233443332222221100
Q ss_pred CCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC
Q 013498 148 SGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 227 (442)
Q Consensus 148 ~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed 227 (442)
. +| |+ .--.+.+-++.|+++ |.+.|+ .+|- .. .+ ++++.+++.|+. |.+....
T Consensus 105 -~-vp-IS-IDT~~~~Va~aAl~a----Ga~iIN---DVsg--------~~----~~---~m~~v~a~~g~~-vVlMh~~ 157 (314)
T 3tr9_A 105 -P-QL-IS-VDTSRPRVMREAVNT----GADMIN---DQRA--------LQ----LD---DALTTVSALKTP-VCLMHFP 157 (314)
T ss_dssp -C-SE-EE-EECSCHHHHHHHHHH----TCCEEE---ETTT--------TC----ST---THHHHHHHHTCC-EEEECCC
T ss_pred -C-Ce-EE-EeCCCHHHHHHHHHc----CCCEEE---ECCC--------CC----ch---HHHHHHHHhCCe-EEEECCC
Confidence 1 12 22 222356667777776 777665 3432 11 11 456667778886 4443322
Q ss_pred CC-CCC------------HHHHHHHHHHHHHcCCc--EEeccCc-cc---c-cCHHHHHHHHHHHHHh-CCCCcceeEEE
Q 013498 228 AG-RSD------------RKFLYEILGEVIKVGAT--TLNIPDT-VG---I-TMPTEFGKLIADIKAN-TPGIENVVIST 286 (442)
Q Consensus 228 as-r~d------------~~~l~~~~~~~~~~Gad--~I~laDT-~G---~-~~P~~v~~li~~l~~~-~p~~~~v~i~~ 286 (442)
.. ++- .+++.+.++.+.++|++ .|.| |- +| . -++++-.++++.+... ..+. .+-+++
T Consensus 158 G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Iil-DPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~-PvL~G~ 235 (314)
T 3tr9_A 158 SETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIII-DPGFGQGNYGKNVSENFYLLNKLPEFVAMGL-PVLSGW 235 (314)
T ss_dssp CTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCCCSGGGCCCHHHHHHHHHTTHHHHTTSS-CBEECC
T ss_pred CCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEE-eCCCCchhhcCCHHHHHHHHHHHHHHhcCCC-CEEEEe
Confidence 11 110 46788888899999986 4544 53 34 2 3456666676665432 1121 133332
Q ss_pred ------------eecCCcchHHHHHHHHHHhCCCEEE
Q 013498 287 ------------HCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 287 ------------H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
-..+-++-.+|-+..|++.||+.|-
T Consensus 236 SRKsfig~~~~~~~~~R~~~t~a~~~~a~~~Ga~IvR 272 (314)
T 3tr9_A 236 SRKSMIGDVLNQPPENRLFGSIAADVLAVYHGASIIR 272 (314)
T ss_dssp TTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEE
T ss_pred chhhhhhhhcCCChHHhHHHHHHHHHHHHHcCCcEEE
Confidence 1123334444556677778888773
No 40
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.96 E-value=0.14 Score=47.85 Aligned_cols=202 Identities=12% Similarity=0.040 Sum_probs=109.3
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccC--------------CCChhHHHHHHHHHHHhcccc
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--------------AASKEDFEAVRTIAKEVGNAV 144 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p--------------~~~~~d~e~v~~l~~~~~~~~ 144 (442)
++-+.--|+|+ ++.++ .++.+.++|++.||+... ..++++.+.++.+.+..+-.
T Consensus 11 klg~~~~~~~~--------~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~- 78 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FPLTE---ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIK- 78 (262)
T ss_dssp EEEEEGGGGTT--------SCHHH---HHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCE-
T ss_pred EEEEEecccCC--------CCHHH---HHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCe-
Confidence 35555566664 34444 566677889999999631 12345566666665543221
Q ss_pred cccCCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 013498 145 DAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (442)
Q Consensus 145 ~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~ 224 (442)
+..+........++++.+++.....|.+.|.+... . + ...+++++|++.|+. +.+-
T Consensus 79 ------i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~-~-------------~---~~~~l~~~a~~~gv~-l~~E 134 (262)
T 3p6l_A 79 ------IVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA-L-------------S---DWDLVEKLSKQYNIK-ISVH 134 (262)
T ss_dssp ------EEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC-G-------------G---GHHHHHHHHHHHTCE-EEEE
T ss_pred ------EEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC-H-------------H---HHHHHHHHHHHhCCE-EEEE
Confidence 11222222234567888888877889998887532 1 1 234677888999974 5553
Q ss_pred cCCC-CC-CCHHHHHHHHHHHHHcCCcEEecc-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH
Q 013498 225 PEDA-GR-SDRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA 301 (442)
Q Consensus 225 ~eda-sr-~d~~~l~~~~~~~~~~Gad~I~la-DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANala 301 (442)
.... +- .+++.+.++++. +.+.+.++ ||.=...-. .+....+++.-+ -...+|.+|..--.
T Consensus 135 n~~~~~~~~~~~~~~~ll~~----~~~~~g~~~D~~h~~~~g--~d~~~~l~~~~~----~i~~vH~~D~~~~~------ 198 (262)
T 3p6l_A 135 NHPQPSDYWKPENLLKAISG----RSQSLGSCSDVGHWRREG--LNQIDCLKQLKG----RIISLHFKDIAPKK------ 198 (262)
T ss_dssp CCSSSSSSSSHHHHHHHHTT----SCTTEEEEEEHHHHHHTT--CCHHHHHHHTTT----CEEEEEECEECCCC------
T ss_pred eCCCccccCCHHHHHHHHHh----CCCceEEEechHHHHhcC--CCHHHHHHHHhh----hheEEeeccCCccc------
Confidence 3221 11 266777666652 33333332 554211000 112333443322 34678998865100
Q ss_pred HHHhCCCEEEecccccccccCcccHHHHHHHHHhcccc
Q 013498 302 GACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEH 339 (442)
Q Consensus 302 Al~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~ 339 (442)
.|.... .-..+| .|+.+...++..|+..|.+
T Consensus 199 ---~~~~~~--~~~~~G--~G~id~~~~~~~l~~~gy~ 229 (262)
T 3p6l_A 199 ---AGENEQ--HDVIWG--TGILDVKGMLKELKSQNFK 229 (262)
T ss_dssp ---TTCSCC--CEECTT--SSSSCHHHHHHHHHHTTCC
T ss_pred ---cCcCcc--ccCCCC--CCccCHHHHHHHHHHCCCC
Confidence 011111 112233 4899999999999987643
No 41
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.81 E-value=0.12 Score=48.49 Aligned_cols=153 Identities=14% Similarity=0.086 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..+.- ..-.+. -.+.++++.|+++ |.+
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~~--------~igagt-vl~~d~~~~A~~a----GAd 100 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLR--SQHGLKAIQVLREQRPEL--------CVGAGT-VLDRSMFAAVEAA----GAQ 100 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESS--STHHHHHHHHHHHHCTTS--------EEEEEC-CCSHHHHHHHHHH----TCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecC--CccHHHHHHHHHHhCccc--------EEeeCe-EeeHHHHHHHHHC----CCC
Confidence 5667889999999999999999863 455567888887764321 111222 2356788888876 888
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 258 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G 258 (442)
.|+. +..+ .+.++.++..|.. +..++ .+++++ ..+.++|+|.|.+
T Consensus 101 ~v~~--p~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~vk~----- 145 (225)
T 1mxs_A 101 FVVT--PGIT------------------EDILEAGVDSEIP-LLPGI-----STPSEI----MMGYALGYRRFKL----- 145 (225)
T ss_dssp SEEC--SSCC------------------HHHHHHHHHCSSC-EECEE-----CSHHHH----HHHHTTTCCEEEE-----
T ss_pred EEEe--CCCC------------------HHHHHHHHHhCCC-EEEee-----CCHHHH----HHHHHCCCCEEEE-----
Confidence 8863 3222 2567788889875 33342 334433 4456889998888
Q ss_pred ccCHHH-H--HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEE
Q 013498 259 ITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQV 310 (442)
Q Consensus 259 ~~~P~~-v--~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~-aGa~~v 310 (442)
.|.+ + .+.++.+++.+|+ +++..= =|.-..|.-.-+. +|++.|
T Consensus 146 --FPa~~~~G~~~lk~i~~~~~~---ipvvai----GGI~~~N~~~~l~~~Ga~~v 192 (225)
T 1mxs_A 146 --FPAEISGGVAAIKAFGGPFGD---IRFCPT----GGVNPANVRNYMALPNVMCV 192 (225)
T ss_dssp --TTHHHHTHHHHHHHHHTTTTT---CEEEEB----SSCCTTTHHHHHHSTTBCCE
T ss_pred --ccCccccCHHHHHHHHhhCCC---CeEEEE----CCCCHHHHHHHHhccCCEEE
Confidence 4432 3 4778888887774 444321 2444457777777 577665
No 42
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=95.66 E-value=0.36 Score=49.71 Aligned_cols=200 Identities=11% Similarity=0.018 Sum_probs=121.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEE-EEcc---------CCCChhHH-HHHHHHHHHhcccccccCCccceEee--ecccc--
Q 013498 97 TLTSKEKLDIARQLAKLGVDII-EAGF---------PAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICG--LSRCN-- 161 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~I-EvG~---------p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~--~~r~~-- 161 (442)
..+.+....+++.-.+.+-..| |+.. -+..++++ ..++.+++..+-.+. |.+.. ++..+
T Consensus 28 ~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~------pV~LhlDHg~~~~w 101 (450)
T 3txv_A 28 SAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPRE------KILLGGDHLGPNPW 101 (450)
T ss_dssp CCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGG------GEEEEEEEESSGGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcc------cEEEECCCCCCccc
Confidence 3678888889999999998854 6642 11223454 467777765321100 12222 22111
Q ss_pred -----hh----hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC----e--EEEccC
Q 013498 162 -----ER----DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD----D--VEFSPE 226 (442)
Q Consensus 162 -----~~----dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~----~--V~f~~e 226 (442)
.+ ..+...+++ .+|...|++=.|..+ ...+...|.+-+.++..+++++|++.+.. . ..++.|
T Consensus 102 ~~~~~~~am~~a~e~i~~aI-~AGFtSVMiD~S~~p--~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtE 178 (450)
T 3txv_A 102 KHLPADEAMAKAEAMITAYA-KAGFTKLHLDTSMGC--AGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTE 178 (450)
T ss_dssp TTSCHHHHHHHHHHHHHHHH-TTTCCEEEECCCBCC--SSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC
T ss_pred ccccHHHHHHHHHHHHHHHH-HcCCCEEEECCCCCc--hhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeee
Confidence 11 122223332 369999887444333 24466788888899999999999986332 1 233444
Q ss_pred CC------------CCCCHHHHHHHHHH----HHHcCCc-----EEeccCccccc---------CHHHHHHHHHHHHHhC
Q 013498 227 DA------------GRSDRKFLYEILGE----VIKVGAT-----TLNIPDTVGIT---------MPTEFGKLIADIKANT 276 (442)
Q Consensus 227 da------------sr~d~~~l~~~~~~----~~~~Gad-----~I~laDT~G~~---------~P~~v~~li~~l~~~~ 276 (442)
+. .-++|+...++++. +.+.|++ .+.++=-.|.. .++.. +.|++.+
T Consensus 179 vpvpGGa~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~----~~L~~~v 254 (450)
T 3txv_A 179 VPIPGGALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARA----EKLSATL 254 (450)
T ss_dssp -------------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTT----SHHHHGG
T ss_pred cCCCCccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHH----HHHHHHh
Confidence 42 36888877777754 4555664 33444444443 33333 4444444
Q ss_pred CCCccee-EEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 277 PGIENVV-ISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 277 p~~~~v~-i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
+ ++| |.+|.|++-|..-.+-..+++.|...+++
T Consensus 255 ~---~~P~LVlhghStDy~~~e~l~~~V~~GiaklNV 288 (450)
T 3txv_A 255 G---QLHGMVFEAHSTDYQTPDALRELVADGFAILKV 288 (450)
T ss_dssp G---TSTTCEEEESCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred c---cCCCEEEecCCCCCCCHHHHHHHHHcCCcEEEE
Confidence 2 245 99999999999999999999999999987
No 43
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=95.65 E-value=0.2 Score=47.48 Aligned_cols=199 Identities=18% Similarity=0.237 Sum_probs=104.3
Q ss_pred HHHHHhHcCCCEEEEccCC---CChhHHHHHHHHHHHhcccccccCCccceEee-e-----cc----------cc-----
Q 013498 106 IARQLAKLGVDIIEAGFPA---ASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-L-----SR----------CN----- 161 (442)
Q Consensus 106 ia~~L~~~GV~~IEvG~p~---~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~-~-----~r----------~~----- 161 (442)
.++.+.++|++.||+..+. .++++.+.++.+.+..+-. +..+.. + .. .+
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~ 98 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQ-------VTVIFGGFDGESYADIPTTARTVGLVPLETRA 98 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCE-------EEEEECCCTTCCCSSHHHHHHHSSSCSTTTHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCE-------EEEEeeccCCcccccccccccccCCCCHHHHH
Confidence 5677788899999997542 2344555666655543221 111111 0 00 01
Q ss_pred --hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHH
Q 013498 162 --ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEI 239 (442)
Q Consensus 162 --~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~ 239 (442)
.+.++++++.....|.+.|.+..+..+.. .....+...+.+.+++++|++.|+. +.+-.. . .+++.+.++
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~--~-~~~~~~~~l 170 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIGFVPES----SSPDYSELVRVTQDLLTHAANHGQA-VHLETG--Q-ESADHLLEF 170 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCCCCT----TSHHHHHHHHHHHHHHHHHHTTTCE-EEEECC--S-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCccc----chHHHHHHHHHHHHHHHHHHHcCCE-EEEecC--C-CCHHHHHHH
Confidence 13345566666667888887754321100 1113456677788888899999873 555332 2 456766666
Q ss_pred HHHHHHcCCcEEec-cCcccccC-H-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccc
Q 013498 240 LGEVIKVGATTLNI-PDTVGITM-P-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTING 316 (442)
Q Consensus 240 ~~~~~~~Gad~I~l-aDT~G~~~-P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~G 316 (442)
++.+ +.+.+.+ -||.=... - .+..+.++.+.. -...+|.||..+--. -.-|..+-.- .-
T Consensus 171 ~~~~---~~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~-------~i~~vHl~D~~~~~~------~~~g~~~~~~--~~ 232 (290)
T 3tva_A 171 IEDV---NRPNLGINFDPANMILYGTGNPIEALRKVAR-------YVRSIHCKDALWAPV------NERGKSWGQE--VA 232 (290)
T ss_dssp HHHH---CCTTEEEEECHHHHHHTTCSCHHHHHHHHGG-------GEEEEEECEEECCCG------GGBTTBCCEE--ES
T ss_pred HHhc---CCCCEEEEeccHHHHHhCCCCHHHHHHHHHh-------hheEEEeccccCCCc------cccccccccc--cC
Confidence 6655 3333332 36532211 0 122334444332 346789998643210 0012111111 12
Q ss_pred cccccCcccHHHHHHHHHhcccc
Q 013498 317 IGERAGNASLEEVVMAFKCRGEH 339 (442)
Q Consensus 317 lGeraGNa~lEevv~~L~~~g~~ 339 (442)
+| .|..+..+++..|+..|.+
T Consensus 233 ~G--~G~id~~~~~~~L~~~gy~ 253 (290)
T 3tva_A 233 LG--TGDVGMEAYLTTLWEIGYR 253 (290)
T ss_dssp TT--SSSSCHHHHHHHHHHTTCC
T ss_pred CC--CceeCHHHHHHHHHHcCCC
Confidence 33 4889999999999987643
No 44
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.64 E-value=0.95 Score=40.87 Aligned_cols=159 Identities=17% Similarity=0.128 Sum_probs=96.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee-cccchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-SRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~-~r~~~~dI~~a~e~l~~~ 175 (442)
..+.++-.++++.+.+.|++.||+.+.. +.-.+.++.+.+..+.. .+.+. +-.+.++++.+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~--~~~~~~i~~ir~~~~~~---------~~ig~~~v~~~~~~~~a~~~---- 82 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTV--PDADTVIKELSFLKEKG---------AIIGAGTVTSVEQCRKAVES---- 82 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHTHHHHHTT---------CEEEEESCCSHHHHHHHHHH----
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHHCCCC---------cEEEecccCCHHHHHHHHHc----
Confidence 3578889999999999999999997642 23334566666543211 12222 11355666666654
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccC
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD 255 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laD 255 (442)
|.+.| +.+..+ .+.++++++.|+. +..+. .++.+ ++.+.++|+|.|.+-.
T Consensus 83 Gad~i--v~~~~~------------------~~~~~~~~~~g~~-vi~g~-----~t~~e----~~~a~~~Gad~vk~~~ 132 (205)
T 1wa3_A 83 GAEFI--VSPHLD------------------EEISQFCKEKGVF-YMPGV-----MTPTE----LVKAMKLGHTILKLFP 132 (205)
T ss_dssp TCSEE--ECSSCC------------------HHHHHHHHHHTCE-EECEE-----CSHHH----HHHHHHTTCCEEEETT
T ss_pred CCCEE--EcCCCC------------------HHHHHHHHHcCCc-EECCc-----CCHHH----HHHHHHcCCCEEEEcC
Confidence 88988 333321 1466778889985 44332 23443 4456789999887532
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 256 TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 256 T~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
. .+. --++++.+++.+|+ +++..=.-=+ ..|....+++||+.|-+
T Consensus 133 ~----~~~-g~~~~~~l~~~~~~---~pvia~GGI~----~~~~~~~~~~Ga~~v~v 177 (205)
T 1wa3_A 133 G----EVV-GPQFVKAMKGPFPN---VKFVPTGGVN----LDNVCEWFKAGVLAVGV 177 (205)
T ss_dssp H----HHH-HHHHHHHHHTTCTT---CEEEEBSSCC----TTTHHHHHHHTCSCEEE
T ss_pred c----ccc-CHHHHHHHHHhCCC---CcEEEcCCCC----HHHHHHHHHCCCCEEEE
Confidence 1 011 23566777776653 5665543332 35778889999988743
No 45
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=95.63 E-value=0.066 Score=50.61 Aligned_cols=211 Identities=18% Similarity=0.174 Sum_probs=107.0
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCCh---hHHHHHHHHHHHhcccccccCCccceEee
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK---EDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~---~d~e~v~~l~~~~~~~~~~~~~l~~~i~~ 156 (442)
+-+.-.++++. +..+.++. ++.+.++|++.||+....... .+.+.++.+.+..+-.+ ..+.+
T Consensus 4 ig~~~~~~~~~-----~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~ 68 (290)
T 2qul_A 4 VGMFYTYWSTE-----WMVDFPAT---AKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTV-------MCCIG 68 (290)
T ss_dssp EEEETTSSCSS-----SCCCHHHH---HHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEE-------EEEEE
T ss_pred eeEEeeeecCc-----ccccHHHH---HHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCce-------EEecC
Confidence 44444555542 12344444 555667899999997543222 45556666555432211 11111
Q ss_pred ------ecccch-------hhHHHHHHHHHhCCCCEEEEee----cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC
Q 013498 157 ------LSRCNE-------RDIKTAWEAVKYAKRPRIHTFI----ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD 219 (442)
Q Consensus 157 ------~~r~~~-------~dI~~a~e~l~~~g~~~v~i~~----~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~ 219 (442)
++.... +.++.+++.....|.+.|.... ......-........+...+.+.+++++|++.|+.
T Consensus 69 ~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 148 (290)
T 2qul_A 69 LKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGII 148 (290)
T ss_dssp ECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 111111 3455666666667888876532 11000000000011345566777788889999974
Q ss_pred eEEEccCC----CCCCCHHHHHHHHHHHHHcCCcEEec-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch
Q 013498 220 DVEFSPED----AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL 294 (442)
Q Consensus 220 ~V~f~~ed----asr~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL 294 (442)
+.+-... ..-.+++.+.++++.+ +.+.+.+ -|+.=... .. .+....+++..+ -...+|.||..+
T Consensus 149 -l~lEn~~~~~~~~~~~~~~~~~l~~~~---~~~~~g~~~D~~h~~~-~g-~d~~~~l~~~~~----~i~~vH~~D~~~- 217 (290)
T 2qul_A 149 -YALEVVNRFEQWLCNDAKEAIAFADAV---DSPACKVQLDTFHMNI-EE-TSFRDAILACKG----KMGHFHLGEANR- 217 (290)
T ss_dssp -EEEECCCTTTCSSCCSHHHHHHHHHHH---CCTTEEEEEEHHHHHH-HC-SCHHHHHHHTTT----TEEEEEECCTTS-
T ss_pred -EEEEeCccccccccCCHHHHHHHHHHc---CCCCEEEEEEchhhhh-cC-CCHHHHHHHHHh----heeEEEEccCCC-
Confidence 5553221 1123677777776554 4332322 26631110 00 122333333322 357899998642
Q ss_pred HHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 295 STANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 295 A~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
.-+|+ |..+.+.++..|+..|.
T Consensus 218 --------------------~~~G~--G~id~~~~~~~L~~~gy 239 (290)
T 2qul_A 218 --------------------LPPGE--GRLPWDEIFGALKEIGY 239 (290)
T ss_dssp --------------------CCTTS--SCSCHHHHHHHHHHTTC
T ss_pred --------------------CCCCC--CCcCHHHHHHHHHHhCC
Confidence 13444 88999999999998753
No 46
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.60 E-value=0.57 Score=45.83 Aligned_cols=204 Identities=19% Similarity=0.239 Sum_probs=108.4
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCC---C-hhHHHHHHHHHHHhcccccccC
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAA---S-KEDFEAVRTIAKEVGNAVDAES 148 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~---~-~~d~e~v~~l~~~~~~~~~~~~ 148 (442)
|.-.-|+.+|. |-..--|..++.+..++.++.+.+.|-++|.+|. |.. + +++++.+.-+.+.+....
T Consensus 40 ~~iMgilNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~---- 114 (297)
T 1tx2_A 40 TLIMGILNVTP-DSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV---- 114 (297)
T ss_dssp CEEEEECCCCC-CTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS----
T ss_pred CEEEEEEeCCC-CccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC----
Confidence 33356777777 3332223356789999999999999999999995 332 2 234443322222221100
Q ss_pred CccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC
Q 013498 149 GYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA 228 (442)
Q Consensus 149 ~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda 228 (442)
. +| |+.-+ .+.+-++.|+++ |.+.|+ ++|.. +. -.++++.+++.|.. |.......
T Consensus 115 ~-vp-iSIDT-~~~~V~~aAl~a----Ga~iIN---dvsg~------~~--------d~~m~~~aa~~g~~-vVlmh~~G 169 (297)
T 1tx2_A 115 K-LP-ISIDT-YKAEVAKQAIEA----GAHIIN---DIWGA------KA--------EPKIAEVAAHYDVP-IILMHNRD 169 (297)
T ss_dssp C-SC-EEEEC-SCHHHHHHHHHH----TCCEEE---ETTTT------SS--------CTHHHHHHHHHTCC-EEEECCCS
T ss_pred C-ce-EEEeC-CCHHHHHHHHHc----CCCEEE---ECCCC------CC--------CHHHHHHHHHhCCc-EEEEeCCC
Confidence 1 12 22222 356667777776 777764 33320 10 11455667778886 44433211
Q ss_pred -CC-CC-----HHHHHHHHHHHHHcCCc--EEeccCc-ccc-cCHHHHHHHHHHHHHhC-CCCcceeEEEe---------
Q 013498 229 -GR-SD-----RKFLYEILGEVIKVGAT--TLNIPDT-VGI-TMPTEFGKLIADIKANT-PGIENVVISTH--------- 287 (442)
Q Consensus 229 -sr-~d-----~~~l~~~~~~~~~~Gad--~I~laDT-~G~-~~P~~v~~li~~l~~~~-p~~~~v~i~~H--------- 287 (442)
.+ .| .+++.+.++.+.++|++ .|.| |. +|. -+.++-.++++.+++.- .+. .+-+++.
T Consensus 170 ~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~Iil-DPg~Gfgk~~~~n~~ll~~l~~l~~lg~-Pvl~G~Srksfig~~~ 247 (297)
T 1tx2_A 170 NMNYRNLMADMIADLYDSIKIAKDAGVRDENIIL-DPGIGFAKTPEQNLEAMRNLEQLNVLGY-PVLLGTSRKSFIGHVL 247 (297)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTGGGGGGGCS-CBEEECTTCHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEE-eCCCCcCCCHHHHHHHHHHHHHHHhCCC-CEEEEeccchhhhhhc
Confidence 11 12 36888888899999987 4554 43 222 24455556666665321 121 1334433
Q ss_pred ---ecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 288 ---CQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 288 ---~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..+-++-.++-+..|+..||+.|.+
T Consensus 248 g~~~~~r~~~t~a~~~~a~~~ga~Ivrv 275 (297)
T 1tx2_A 248 DLPVEERLEGTGATVCLGIEKGCEFVRV 275 (297)
T ss_dssp TCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHhHHHHHHHHHHHHHCCCcEEEe
Confidence 0112223334555566677777755
No 47
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=95.59 E-value=0.34 Score=45.46 Aligned_cols=190 Identities=12% Similarity=0.026 Sum_probs=104.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee----ecc-------------c
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----LSR-------------C 160 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~----~~r-------------~ 160 (442)
++.++ .++.+.++|++.||+..|. +.+.+.++.+.+..+-.+ ..+.. |.. .
T Consensus 23 ~~~~~---~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~gl~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~ 90 (269)
T 3ngf_A 23 VPFLE---RFRLAAEAGFGGVEFLFPY--DFDADVIARELKQHNLTQ-------VLFNMPPGDWAAGERGMAAISGREQE 90 (269)
T ss_dssp SCHHH---HHHHHHHTTCSEEECSCCT--TSCHHHHHHHHHHTTCEE-------EEEECCCSCTTTTCCBCTTCTTCHHH
T ss_pred CCHHH---HHHHHHHcCCCEEEecCCc--cCCHHHHHHHHHHcCCcE-------EEEecCCCccccCCCCcCCCccHHHH
Confidence 45554 5566777899999998764 334566666655433211 11111 110 0
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCeEEEccCC------CCC
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFSPED------AGR 230 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~G~~~V~f~~ed------asr 230 (442)
..+.++++++.....|.+.|.+... .+ .+.+ .+...+.+.+++++|++.|+. +.+-... ..-
T Consensus 91 ~~~~~~~~i~~A~~lGa~~v~~~~g-~~------~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~n~~~~~~~~~ 162 (269)
T 3ngf_A 91 FRDNVDIALHYALALDCRTLHAMSG-IT------EGLDRKACEETFIENFRYAADKLAPHGIT-VLVEPLNTRNMPGYFI 162 (269)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCBC-BC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccC-CC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEeeCCcccCccchh
Confidence 1234666777777789998876544 21 1223 344556667788888888973 5553211 112
Q ss_pred CCHHHHHHHHHHHHHcCCcEEec-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 013498 231 SDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~ 309 (442)
.+++.+.++++.+ +.+.+.+ -||.=...-. .+....+++..+ -...+|.+|..|-
T Consensus 163 ~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~~~~----~i~~vHl~D~~~r--------------- 218 (269)
T 3ngf_A 163 VHQLEAVGLVKRV---NRPNVAVQLDLYHAQIMD--GDLTRLIEKMNG----AFSHVQIASVPDR--------------- 218 (269)
T ss_dssp CCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHHTTT----SEEEEEECCTTTC---------------
T ss_pred cCHHHHHHHHHHh---CCCCCCeEEEhhhHHhhC--CCHHHHHHHhhh----hEEEEEEecCCCC---------------
Confidence 3567666666655 4333333 2553111100 122333333322 3568999997531
Q ss_pred EEecccccccccCcccHHHHHHHHHhccc
Q 013498 310 VEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 310 vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
. -.| .|+.+..+++..|+..|.
T Consensus 219 ---~--~~G--~G~id~~~~~~~L~~~gy 240 (269)
T 3ngf_A 219 ---H--EPD--EGELNYPYLFSVLESVGY 240 (269)
T ss_dssp ---C--CTT--SSSBCHHHHHHHHHHTTC
T ss_pred ---C--CCC--CCccCHHHHHHHHHHcCC
Confidence 1 234 588999999999998753
No 48
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.55 E-value=0.13 Score=48.30 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
.+.++-+++++.|.+.|++.||+.+- ++...+.++.+++..++- ..-.+. -...++++.|+++ |.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~l--------~vgaGt-vl~~d~~~~A~~a----GA 90 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR--SEAAADAIRLLRANRPDF--------LIAAGT-VLTAEQVVLAKSS----GA 90 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHHHHHCTTC--------EEEEES-CCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc--CchHHHHHHHHHHhCcCc--------EEeeCc-EeeHHHHHHHHHC----CC
Confidence 45677889999999999999999863 445567888888764321 011121 2356788888876 88
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcc
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~ 257 (442)
+.|+. +..+ .+.++.+++.|.. +..++ .+++++ ..+.++|+|.|.+
T Consensus 91 d~v~~--p~~d------------------~~v~~~ar~~g~~-~i~Gv-----~t~~e~----~~A~~~Gad~vk~---- 136 (224)
T 1vhc_A 91 DFVVT--PGLN------------------PKIVKLCQDLNFP-ITPGV-----NNPMAI----EIALEMGISAVKF---- 136 (224)
T ss_dssp SEEEC--SSCC------------------HHHHHHHHHTTCC-EECEE-----CSHHHH----HHHHHTTCCEEEE----
T ss_pred CEEEE--CCCC------------------HHHHHHHHHhCCC-EEecc-----CCHHHH----HHHHHCCCCEEEE----
Confidence 88853 3222 2457788889875 44442 234543 3456899998877
Q ss_pred cccCHHH-H--HHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh-CCCEE
Q 013498 258 GITMPTE-F--GKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA-GARQV 310 (442)
Q Consensus 258 G~~~P~~-v--~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~a-Ga~~v 310 (442)
.|.+ + .+.++.+++.+|+ +++..= =|.-..|.-.-+.+ |+..|
T Consensus 137 ---Fpa~~~gG~~~lk~l~~~~~~---ipvvai----GGI~~~N~~~~l~agga~~v 183 (224)
T 1vhc_A 137 ---FPAEASGGVKMIKALLGPYAQ---LQIMPT----GGIGLHNIRDYLAIPNIVAC 183 (224)
T ss_dssp ---TTTTTTTHHHHHHHHHTTTTT---CEEEEB----SSCCTTTHHHHHTSTTBCCE
T ss_pred ---eeCccccCHHHHHHHHhhCCC---CeEEEE----CCcCHHHHHHHHhcCCCEEE
Confidence 2211 1 4677888887764 444321 23444577777777 55443
No 49
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=95.49 E-value=0.38 Score=45.19 Aligned_cols=222 Identities=15% Similarity=0.043 Sum_probs=113.8
Q ss_pred HHHHHHhHcCCCEEEEcc--C------CCChhHHHHHHHHHHHhcccccccCCccceEeee-------cccc-------h
Q 013498 105 DIARQLAKLGVDIIEAGF--P------AASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-------SRCN-------E 162 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~--p------~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~-------~r~~-------~ 162 (442)
+.++.+.++|++.||+.. | ..++++.+.++.+.+..+-.+ ..++.+ +..+ .
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~h~~~~~~~~~~~~~~r~~~~ 88 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW-------ENAFCHSGYLINLASPKDDIWQKSV 88 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG-------GGEEEECCTTCCTTCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc-------ceeEEecccccccCCCCHHHHHHHH
Confidence 445667788999999942 1 122345566666555433211 012211 1111 1
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEEccCCCCC------CCHH
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDAGR------SDRK 234 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~--~G~~~V~f~~edasr------~d~~ 234 (442)
+.++.+++.....|.+.|.+..... .+.+.++.++++.+.++.+.+ .|+ .+..|.... .+++
T Consensus 89 ~~~~~~i~~A~~lG~~~v~~~~g~~-------~~~~~~~~~~~~~~~l~~l~~~~~gv---~l~lEn~~~~~~~~~~~~~ 158 (287)
T 2x7v_A 89 ELLKKEVEICRKLGIRYLNIHPGSH-------LGTGEEEGIDRIVRGLNEVLNNTEGV---VILLENVSQKGGNIGYKLE 158 (287)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCEEC-------TTSCHHHHHHHHHHHHHHHHTTCCSC---EEEEECCCCCTTEECSSHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-------CCCCHHHHHHHHHHHHHHHHcccCCC---EEEEeCCCCCCCccCCCHH
Confidence 2345556665666888887643321 123566777777777766544 344 444442211 3667
Q ss_pred HHHHHHHHHHHcCC-cEEecc-Ccc-----cc--cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh
Q 013498 235 FLYEILGEVIKVGA-TTLNIP-DTV-----GI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 305 (442)
Q Consensus 235 ~l~~~~~~~~~~Ga-d~I~la-DT~-----G~--~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~a 305 (442)
.+.++++.+ +- +.+.++ ||. |. ..|..+.++++.+.+.++. +-...+|.||..+- .
T Consensus 159 ~~~~l~~~~---~~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~--~~i~~vH~~D~~~~----------~ 223 (287)
T 2x7v_A 159 QLKKIRDLV---DQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGL--ERLKMIHLNDSKYP----------L 223 (287)
T ss_dssp HHHHHHHHC---SCGGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------T
T ss_pred HHHHHHHhc---CCCCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCc--cceeEEEEecCCCc----------c
Confidence 666666554 32 333332 553 22 2345677777777665430 13578999986541 0
Q ss_pred CCCEEEecccccccccCcccHHHHHHHHHhccccc-cCCccCCCChhHHHHHHHHHHH
Q 013498 306 GARQVEVTINGIGERAGNASLEEVVMAFKCRGEHI-LGGLYTGINTRHIVMASKMVEE 362 (442)
Q Consensus 306 Ga~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~-~~G~~tgidl~~L~~ls~~v~~ 362 (442)
|-. -+- -..+|+ |..+.+.++..|+..|.+. ...++..-|.+.+.+-.+++.+
T Consensus 224 ~~~-~~~-~~~~G~--G~id~~~~~~~L~~~gy~g~~~~lE~~~~~~~~~~s~~~l~~ 277 (287)
T 2x7v_A 224 GAA-KDR-HERIGS--GFIGEEGFAVFFSFKEIQEVPWILETPGGNEEHAEDIKKVFE 277 (287)
T ss_dssp TCC-CCC-EECTTS--SSSHHHHHHHHHTCHHHHTSCEEECCSSCHHHHHHHHHHHHH
T ss_pred CCc-ccc-cCCCCC--CCcCHHHHHHHHhccCCCCCcEEEecCCCCcchHHHHHHHHH
Confidence 111 010 112444 7899999999998655321 1123333244444444444443
No 50
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.45 E-value=0.45 Score=44.34 Aligned_cols=199 Identities=10% Similarity=0.006 Sum_probs=108.9
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccC----CCChhHHHHHHHHHHHhcccccccCCccceE
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP----AASKEDFEAVRTIAKEVGNAVDAESGYVPVI 154 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p----~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i 154 (442)
++-+.-.|+|+ ++.+ +.++.+.++|++.||+... ..++++.+.++.+.+..+-. +..+
T Consensus 19 klg~~~~~~~~--------~~~~---~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~-------i~~~ 80 (257)
T 3lmz_A 19 HLGMAGYTFVN--------FDLD---TTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVT-------GYAV 80 (257)
T ss_dssp EEEECGGGGTT--------SCHH---HHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCE-------EEEE
T ss_pred EEEEEEEeecC--------CCHH---HHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCe-------EEEE
Confidence 35555556655 3554 4566677889999999642 22455556666655543221 1122
Q ss_pred eeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC---CCCC
Q 013498 155 CGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGRS 231 (442)
Q Consensus 155 ~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed---asr~ 231 (442)
........+.++++++.....|.+.|.+... .+.+.+++++|++.|+. +.+-... ..-.
T Consensus 81 ~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~-----------------~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~ 142 (257)
T 3lmz_A 81 GPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN-----------------YELLPYVDKKVKEYDFH-YAIHLHGPDIKTYP 142 (257)
T ss_dssp EEEEECSHHHHHHHHHHHHHHTCSEEEEEEC-----------------GGGHHHHHHHHHHHTCE-EEEECCCTTCSSSC
T ss_pred eccccCCHHHHHHHHHHHHHhCCCEEEecCC-----------------HHHHHHHHHHHHHcCCE-EEEecCCCcccccC
Confidence 2222234566777777766779998876422 13345677888999974 5553321 1224
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+++.+.++++. .....=..-||.=...- ....+.++.+.. -...+|.+|..+- +-+.
T Consensus 143 ~~~~~~~ll~~---~~p~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~-----------~~~~- 200 (257)
T 3lmz_A 143 DATDVWVHTKD---LDPRIGMCLDVGHDLRNGCDPVADLKKYHT-------RVFDMHIKDVTDS-----------SKAG- 200 (257)
T ss_dssp SHHHHHHHHTT---SCTTEEEEEEHHHHHHTTCCHHHHHHHHGG-------GEEEEEECEESCS-----------STTC-
T ss_pred CHHHHHHHHHh---CCCCccEEEchhhHHHcCCCHHHHHHHhhc-------ceeEEeecccccc-----------cCCC-
Confidence 66777676652 23332223365411100 012333333332 3467999987651 1111
Q ss_pred EecccccccccCcccHHHHHHHHHhcccc
Q 013498 311 EVTINGIGERAGNASLEEVVMAFKCRGEH 339 (442)
Q Consensus 311 d~Tv~GlGeraGNa~lEevv~~L~~~g~~ 339 (442)
...-+| .|+.+..+++..|+..|.+
T Consensus 201 --~~~~~G--~G~id~~~~~~~L~~~gy~ 225 (257)
T 3lmz_A 201 --VGIEIG--RGKIDFPALIRMMREVNYT 225 (257)
T ss_dssp --CEECTT--SSSCCHHHHHHHHHHTTCC
T ss_pred --CccccC--CCccCHHHHHHHHHHcCCC
Confidence 111234 4889999999999987643
No 51
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=95.42 E-value=0.29 Score=47.67 Aligned_cols=191 Identities=11% Similarity=0.095 Sum_probs=100.2
Q ss_pred HHHHHHhHcCCCEEEEccCCCC--h-----hHHHHHHHHHHHhcccccccCCcc---c-eEeeecc-c-----c------
Q 013498 105 DIARQLAKLGVDIIEAGFPAAS--K-----EDFEAVRTIAKEVGNAVDAESGYV---P-VICGLSR-C-----N------ 161 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~p~~~--~-----~d~e~v~~l~~~~~~~~~~~~~l~---~-~i~~~~r-~-----~------ 161 (442)
+.++.+.++|++.||+...... + .+.+.++.+.+.. ++. . .+.++.+ . +
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~--------gL~~~~i~~~~~~~~~~~l~~~d~~~r~~ 106 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSE--------GLENVKISTNVGATRTFDPSSNYPEQRQE 106 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHT--------TCTTCEEEEECCCCSSSCTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHC--------CCCcceeEEEeccCCCCCCCCCCHHHHHH
Confidence 5667778899999999743221 2 3344555544432 222 1 1111111 0 1
Q ss_pred -hhhHHHHHHHHHhCCCCEEEEeecC-Ch--H-----H--------HHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 013498 162 -ERDIKTAWEAVKYAKRPRIHTFIAT-SG--I-----H--------MEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (442)
Q Consensus 162 -~~dI~~a~e~l~~~g~~~v~i~~~~-Sd--~-----h--------~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~ 224 (442)
.+.++.+++..+..|.+.|. .+. +. . . .........+...+.+.+++++|++.|+. +.+-
T Consensus 107 ~~~~~~~~i~~A~~lG~~~v~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE 183 (335)
T 2qw5_A 107 ALEYLKSRVDITAALGGEIMM--GPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVK-LAIE 183 (335)
T ss_dssp HHHHHHHHHHHHHHTTCSEEE--ECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEe--ccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCE-EEEe
Confidence 13455667777778999883 221 10 0 0 00000112345667778888899999973 6553
Q ss_pred cCC----CCCCCHHHHHHHHHHHHHcCCcEEecc-Ccc----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH
Q 013498 225 PED----AGRSDRKFLYEILGEVIKVGATTLNIP-DTV----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 295 (442)
Q Consensus 225 ~ed----asr~d~~~l~~~~~~~~~~Gad~I~la-DT~----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA 295 (442)
... ..-.+.+.+.++++. .+.+.+.++ ||. +-..|.++.+.++.+... + -...+|.+|..
T Consensus 184 ~~~~~~~~~~~t~~~~~~ll~~---v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~~~-~----ri~~vHlkD~~--- 252 (335)
T 2qw5_A 184 PITHWETPGPNKLSQLIEFLKG---VKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLAQQ-G----RLHYVQVSPPD--- 252 (335)
T ss_dssp CCCTTTCSSCCSHHHHHHHHTT---CCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHHHH-T----CEEEEEECCTT---
T ss_pred eCCcccccccCCHHHHHHHHHh---cCCCCeeEEEecccchhccCChHHHHHHHHHhCCc-C----CEEEEEECCCC---
Confidence 321 112355655555543 344434333 663 122454443555554410 2 24689998842
Q ss_pred HHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 296 ~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
-.-+|+ |..+.+.++..|+. |.
T Consensus 253 ------------------~~~~G~--G~id~~~i~~~L~~-gy 274 (335)
T 2qw5_A 253 ------------------RGALHT--SWLPWKSFLTPIVK-VY 274 (335)
T ss_dssp ------------------SSCSSS--SCCCHHHHHHHHHH-HC
T ss_pred ------------------CCCCCC--CCcCHHHHHHHHHc-cC
Confidence 123444 88999999999987 64
No 52
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.40 E-value=0.19 Score=48.61 Aligned_cols=180 Identities=13% Similarity=0.124 Sum_probs=105.1
Q ss_pred EEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeeccc
Q 013498 81 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC 160 (442)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~ 160 (442)
+|+++| .|-.+-.+...+.+..++.++.+.+.|-++|.+|.-+..+++.+.+..+.+.+.... . +| ++.-+ .
T Consensus 15 EilN~T-pdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~----~-~p-isIDT-~ 86 (271)
T 2yci_X 15 ERINGM-FKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV----D-LP-CCLDS-T 86 (271)
T ss_dssp EEEETT-SHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC----C-CC-EEEEC-S
T ss_pred EecCCC-hhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC----C-Ce-EEEeC-C
Confidence 488888 553332233467799999999999999999999976555556665555444432210 1 22 22222 3
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCC----HH
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSD----RK 234 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d----~~ 234 (442)
+.+-++.++++. .|.+.|+ ++|- . + +++.++++.+++.|.. |.....| ..-.+ .+
T Consensus 87 ~~~v~~aal~a~--~Ga~iIN---dvs~--------~---~--d~~~~~~~~~a~~~~~-vv~m~~d~~G~p~t~~~~~~ 147 (271)
T 2yci_X 87 NPDAIEAGLKVH--RGHAMIN---STSA--------D---Q--WKMDIFFPMAKKYEAA-IIGLTMNEKGVPKDANDRSQ 147 (271)
T ss_dssp CHHHHHHHHHHC--CSCCEEE---EECS--------C---H--HHHHHHHHHHHHHTCE-EEEESCBTTBCCCSHHHHHH
T ss_pred CHHHHHHHHHhC--CCCCEEE---ECCC--------C---c--cccHHHHHHHHHcCCC-EEEEecCCCCCCCCHHHHHH
Confidence 666677777763 2666665 3321 0 0 3344667778888985 5554432 22234 56
Q ss_pred HHHHHHHHHHHcCCcE--EeccCcccc--cCHHHHHHHHHHHHH---hC-CCCcceeEEEeecC
Q 013498 235 FLYEILGEVIKVGATT--LNIPDTVGI--TMPTEFGKLIADIKA---NT-PGIENVVISTHCQN 290 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~--I~laDT~G~--~~P~~v~~li~~l~~---~~-p~~~~v~i~~H~HN 290 (442)
++.+.++.+.++|++. |.|==.+|. -..++-.++++.++. .. |+ .|+.+=.+|
T Consensus 148 ~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~---~p~l~G~Sn 208 (271)
T 2yci_X 148 LAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPA---PRTVLGLSN 208 (271)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSC---CEEEEEGGG
T ss_pred HHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCC---CCEEEeeCc
Confidence 7888888899999863 554222333 134555566666554 33 32 555554444
No 53
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=95.34 E-value=0.37 Score=47.20 Aligned_cols=140 Identities=17% Similarity=0.115 Sum_probs=81.9
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEE--ccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEA--GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 173 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEv--G~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~ 173 (442)
..++.++..++++.+.+.|++.|-+ |-|-..++=.+.++.+.+.. .. ..+...+ |-..++..++.++
T Consensus 48 ~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~~~~~~~--------~~-~~i~i~T--NG~ll~~~~~~L~ 116 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQID--------GI-EDIGLTT--NGLLLKKHGQKLY 116 (340)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHHHHTTCT--------TC-CEEEEEE--CSTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHHHHHhCC--------CC-CeEEEEe--CccchHHHHHHHH
Confidence 4589999999999999999998877 34544443234444443321 10 0122112 2222233445556
Q ss_pred hCCCCEEEEeecCChHHHHHHh-CCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCc
Q 013498 174 YAKRPRIHTFIATSGIHMEHKL-RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT 249 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l-~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad 249 (442)
.+|+++|.+.+-..+.....++ +.. ..++.+.+.++.+++.|+ .|.+...-....+.+.+.++++.+.+.|++
T Consensus 117 ~~g~~~v~iSld~~~~~~~~~i~~~~--~~~~~v~~~i~~l~~~g~-~v~i~~vv~~g~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 117 DAGLRRINVSLDAIDDTLFQSINNRN--IKATTILEQIDYATSIGL-NVKVNVVIQKGINDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp HHTCCEEEEECCCSSHHHHHHHHSSC--CCHHHHHHHHHHHHHTTC-EEEEEEEECTTTTGGGHHHHHHHHHHTTCC
T ss_pred HCCCCEEEEecCCCCHHHHHHhhCCC--CCHHHHHHHHHHHHHCCC-CEEEEEEEeCCCCHHHHHHHHHHHHhcCCe
Confidence 6789999987655332222222 221 024556677888889998 465544211122456788999999999987
No 54
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.34 E-value=2.3 Score=41.58 Aligned_cols=194 Identities=13% Similarity=0.147 Sum_probs=119.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.||+-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~st~eai~la~ 112 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-------GRIPVIAGTGANSTREAVALTE 112 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHHH
Confidence 478888999999999999998877 3 455566665 45555555542 3357888877655444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
..+.+|++.+-+..|-. ++.+.++.++-..+.++. .++.-+-++.+. ....+++.+.+++ + -
T Consensus 113 -~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 176 (314)
T 3qze_A 113 -AAKSGGADACLLVTPYY-------NKPTQEGMYQHFRHIAEA---VAIPQILYNVPGRTSCDMLPETVERLS----K-V 176 (314)
T ss_dssp -HHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---SCSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred -HHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHh----c-C
Confidence 34567999887765532 244666666655555443 355545555532 3456677766654 3 3
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++ ..++ +..+ +-..+++ .+.++..|++.+ +. ..+|...+
T Consensus 177 pnIvgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~~------~l~~l~~Ga~G~---is----~~an~~P~ 234 (314)
T 3qze_A 177 PNIIGIKEATGD--LQRAKEVIE----RVGK--DFLV-YSGDDAT------AVELMLLGGKGN---IS----VTANVAPR 234 (314)
T ss_dssp TTEEEEEECSCC--HHHHHHHHH----HSCT--TSEE-EESCGGG------HHHHHHTTCCEE---EE----SGGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHH----HcCC--CeEE-EecChHH------HHHHHHCCCCEE---Ee----cHHhhhHH
Confidence 579999999884 445555443 3432 2222 3344332 577888998754 22 24677777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 235 ~~~~l~~a 242 (314)
T 3qze_A 235 AMSDLCAA 242 (314)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665554
No 55
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.33 E-value=0.16 Score=47.25 Aligned_cols=154 Identities=20% Similarity=0.136 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
.+.++-+++++.|.+.|++.||+++- ++...+.++.+++..+.- ..-.+. -...++++.++++ |.
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k--~~~~~~~i~~l~~~~~~~--------~vgagt-vi~~d~~~~A~~a----GA 89 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLR--TECAVDAIRAIAKEVPEA--------IVGAGT-VLNPQQLAEVTEA----GA 89 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESC--STTHHHHHHHHHHHCTTS--------EEEEES-CCSHHHHHHHHHH----TC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC--ChhHHHHHHHHHHHCcCC--------EEeeCE-EEEHHHHHHHHHc----CC
Confidence 35667789999999999999999964 345567888887764321 011121 2356788888886 88
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcc
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~ 257 (442)
+.|+. +..+ .+.++.++..|.. +..++ .+++++ ..+.++|+|.|.+
T Consensus 90 d~v~~--p~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~v~~---- 135 (214)
T 1wbh_A 90 QFAIS--PGLT------------------EPLLKAATEGTIP-LIPGI-----STVSEL----MLGMDYGLKEFKF---- 135 (214)
T ss_dssp SCEEE--SSCC------------------HHHHHHHHHSSSC-EEEEE-----SSHHHH----HHHHHTTCCEEEE----
T ss_pred CEEEc--CCCC------------------HHHHHHHHHhCCC-EEEec-----CCHHHH----HHHHHCCCCEEEE----
Confidence 88863 3322 2567788889975 44443 234443 4456899998877
Q ss_pred cccCHHH---HHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh-CCCEE
Q 013498 258 GITMPTE---FGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA-GARQV 310 (442)
Q Consensus 258 G~~~P~~---v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~a-Ga~~v 310 (442)
.|.+ -.+.++.+++.+|+ +++-.= =|.-..|.-.-+.+ |+..|
T Consensus 136 ---Fpa~~~gG~~~lk~i~~~~~~---ipvvai----GGI~~~n~~~~l~agg~~~v 182 (214)
T 1wbh_A 136 ---FPAEANGGVKALQAIAGPFSQ---VRFCPT----GGISPANYRDYLALKSVLCI 182 (214)
T ss_dssp ---TTTTTTTHHHHHHHHHTTCTT---CEEEEB----SSCCTTTHHHHHTSTTBSCE
T ss_pred ---ecCccccCHHHHHHHhhhCCC---CeEEEE----CCCCHHHHHHHHhcCCCeEE
Confidence 2211 14677888887774 444321 23444577777777 54433
No 56
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.33 E-value=1.9 Score=42.00 Aligned_cols=193 Identities=14% Similarity=0.161 Sum_probs=117.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~ 101 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD-------KRVPVIAGTGSNNTHASIDLTK 101 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCceEEeCCCCCCHHHHHHHHH
Confidence 378888899999999999998876 4 455566665 45555555542 2357888877655444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. ...+|++.+-+..|-. ++-+.++.++-..+.++ ..++.-+-++.+. ....+++.+.+++ + -
T Consensus 102 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 165 (301)
T 1xky_A 102 K-ATEVGVDAVMLVAPYY-------NKPSQEGMYQHFKAIAE---STPLPVMLYNVPGRSIVQISVDTVVRLS----E-I 165 (301)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---TCSSCEEEEECHHHHSSCCCHHHHHHHH----T-S
T ss_pred H-HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----c-C
Confidence 3 3567999887765532 23466666665555433 3355534555432 3346777777665 2 2
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++ ..++ +..+ +-+.+++ .+.++..|++.+ +.| .+|...+
T Consensus 166 pnIvgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 223 (301)
T 1xky_A 166 ENIVAIKDAGGD--VLTMTEIIE----KTAD--DFAV-YSGDDGL------TLPAMAVGAKGI---VSV----ASHVIGN 223 (301)
T ss_dssp TTEEEEEECSSC--HHHHHHHHH----HSCT--TCEE-EESSGGG------HHHHHHTTCCEE---EES----THHHHHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHH----hcCC--CeEE-EECcHHH------HHHHHHcCCCEE---EcC----HHHhCHH
Confidence 679999999985 345555443 3442 2222 3344432 456778898654 332 3566666
Q ss_pred HHHHHHH
Q 013498 328 EVVMAFK 334 (442)
Q Consensus 328 evv~~L~ 334 (442)
.++...+
T Consensus 224 ~~~~l~~ 230 (301)
T 1xky_A 224 EMQEMIA 230 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 57
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.33 E-value=0.78 Score=45.86 Aligned_cols=179 Identities=15% Similarity=0.166 Sum_probs=109.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEc--------cCCC----------Ch-h-------HHHHHHHHHHHhcccccccCCc
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAG--------FPAA----------SK-E-------DFEAVRTIAKEVGNAVDAESGY 150 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG--------~p~~----------~~-~-------d~e~v~~l~~~~~~~~~~~~~l 150 (442)
.=+.++.+++++...++|.+.+=.+ .|.+ +. + .++..+.|.+..... ++
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~-----Gi 105 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK-----GM 105 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT-----TC
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh-----CC
Confidence 3489999999999999999999887 2311 00 0 123333333332111 22
Q ss_pred cceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCC
Q 013498 151 VPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR 230 (442)
Q Consensus 151 ~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr 230 (442)
. .++ +....++++...+ .+++.+.| +..+. + ++ ++++++.+.|.+ |-++- +-
T Consensus 106 ~-~~s--t~~d~~svd~l~~----~~v~~~KI--~S~~~--------~---n~----~LL~~va~~gkP-viLst---Gm 157 (349)
T 2wqp_A 106 I-FIS--TLFSRAAALRLQR----MDIPAYKI--GSGEC--------N---NY----PLIKLVASFGKP-IILST---GM 157 (349)
T ss_dssp E-EEE--EECSHHHHHHHHH----HTCSCEEE--CGGGT--------T---CH----HHHHHHHTTCSC-EEEEC---TT
T ss_pred e-EEE--eeCCHHHHHHHHh----cCCCEEEE--Ccccc--------c---CH----HHHHHHHhcCCe-EEEEC---CC
Confidence 1 121 1235556654433 26676665 33322 1 11 456666778876 76653 33
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHH--HHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKL--IADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~l--i~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~ 308 (442)
++.+++...++.+.+.|.+.+-+-=+.++=+|.+..+| |..|++.+|+ ++|++=.|- .| .+-+++|+.+||+
T Consensus 158 at~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~---lpVg~sdHt-~G--~~~~~AAvAlGA~ 231 (349)
T 2wqp_A 158 NSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPD---AIIGLSDHT-LD--NYACLGAVALGGS 231 (349)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTT---SEEEEECCS-SS--SHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCC---CCEEeCCCC-Cc--HHHHHHHHHhCCC
Confidence 58888989999998889854333224445445555444 7888998863 678886665 35 7788999999999
Q ss_pred EEEecc
Q 013498 309 QVEVTI 314 (442)
Q Consensus 309 ~vd~Tv 314 (442)
.|+.=+
T Consensus 232 iIEkH~ 237 (349)
T 2wqp_A 232 ILERHF 237 (349)
T ss_dssp EEEEEB
T ss_pred EEEeCC
Confidence 986543
No 58
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=95.30 E-value=0.26 Score=45.89 Aligned_cols=166 Identities=16% Similarity=0.169 Sum_probs=98.3
Q ss_pred HHHHHHHHHhHcCCCEEEEc-----cCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccc-hhhHHHHHHHHHhC
Q 013498 102 EKLDIARQLAKLGVDIIEAG-----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVKYA 175 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG-----~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~e~l~~~ 175 (442)
.-.+.++.+.+.|++.|++. |........+.++.+.+.... +..+.+--.+ .+.++.+.++
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~---------~~~v~lmv~d~~~~i~~~~~a---- 86 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKA---------YLDCHLMVTNPSDYVEPLAKA---- 86 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCS---------EEEEEEESSCGGGGHHHHHHH----
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCC---------cEEEEEEecCHHHHHHHHHHc----
Confidence 34556778889999999987 422222224666666653210 1111111112 3347777664
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHc--CCcEEec
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV--GATTLNI 253 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~--Gad~I~l 253 (442)
|.+.|.+....++. .+.+.++.+++.|+. +.+.+. ..++.+. ++.+.+. ++|.|++
T Consensus 87 gad~v~vH~~~~~~---------------~~~~~~~~i~~~g~~-igv~~~--p~t~~e~----~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 87 GASGFTFHIEVSRD---------------NWQELIQSIKAKGMR-PGVSLR--PGTPVEE----VFPLVEAENPVELVLV 144 (228)
T ss_dssp TCSEEEEEGGGCTT---------------THHHHHHHHHHTTCE-EEEEEC--TTSCGGG----GHHHHHSSSCCSEEEE
T ss_pred CCCEEEECCCCccc---------------HHHHHHHHHHHcCCC-EEEEEe--CCCCHHH----HHHHHhcCCCCCEEEE
Confidence 89998776554431 013566777888874 666552 2233333 3344455 8898877
Q ss_pred cCcc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 254 PDTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 254 aDT~-----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+|+ |...+....+.++.+++..++ +++.+ +-|....|.-.++++||+.+
T Consensus 145 -~sv~pg~~g~~~~~~~l~~i~~~~~~~~~---~pi~v----~GGI~~~ni~~~~~aGaD~v 198 (228)
T 1h1y_A 145 -MTVEPGFGGQKFMPEMMEKVRALRKKYPS---LDIEV----DGGLGPSTIDVAASAGANCI 198 (228)
T ss_dssp -ESSCTTCSSCCCCGGGHHHHHHHHHHCTT---SEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred -EeecCCCCcccCCHHHHHHHHHHHHhcCC---CCEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 333 444456667778888887743 44543 46776678888899999986
No 59
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.24 E-value=0.2 Score=46.42 Aligned_cols=214 Identities=19% Similarity=0.189 Sum_probs=111.7
Q ss_pred EEeCCCCcC--CCCCCCCCCH----HHHHHHHHHHhHcCCCEEEEccCCC----ChhHHHHHHHHHHHhcccccccCCcc
Q 013498 82 VFDTTLRDG--EQSPGATLTS----KEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYV 151 (442)
Q Consensus 82 I~DtTLRDG--~Q~~g~~fs~----e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~ 151 (442)
|.-..+||| .-..|+.+.. ++-.++++.+.+.|++.|++--+.. .+..++.++.+.+... .
T Consensus 8 ip~id~~~g~~~~v~g~~~~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~---------i 78 (253)
T 1h5y_A 8 IPCLDIDGGAKVVVKGVNFQGIREVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS---------I 78 (253)
T ss_dssp EEEEEECGGGCEECTTCCCHHHHEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS---------S
T ss_pred EEEEEEcCCceEEEEcccccceeecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC---------C
Confidence 344446788 3333444432 3568899999999999988853222 1234667777776531 2
Q ss_pred ceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE--EEccC---
Q 013498 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV--EFSPE--- 226 (442)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V--~f~~e--- 226 (442)
|.+..-.-.+.++++.++++ |++.|.+-... ++......+.++..|.+.+ .+.+.
T Consensus 79 pvi~~g~i~~~~~~~~~~~~----Gad~V~i~~~~----------------~~~~~~~~~~~~~~g~~~i~~~~~~~~~~ 138 (253)
T 1h5y_A 79 PVLVGGGVRSLEDATTLFRA----GADKVSVNTAA----------------VRNPQLVALLAREFGSQSTVVAIDAKWNG 138 (253)
T ss_dssp CEEEESSCCSHHHHHHHHHH----TCSEEEESHHH----------------HHCTHHHHHHHHHHCGGGEEEEEEEEECS
T ss_pred CEEEECCCCCHHHHHHHHHc----CCCEEEEChHH----------------hhCcHHHHHHHHHcCCCcEEEEEEeecCC
Confidence 44433333356677666664 88888764211 1111112233344553212 21110
Q ss_pred -------CCCCC-CHHHHHHHHHHHHHcCCcEEec--cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-
Q 013498 227 -------DAGRS-DRKFLYEILGEVIKVGATTLNI--PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS- 295 (442)
Q Consensus 227 -------dasr~-d~~~l~~~~~~~~~~Gad~I~l--aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA- 295 (442)
..... ......+.++.+.+.|++.|.+ .+..|..... -.++++.+++..+ ++|..= -|..
T Consensus 139 g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~~----~pvia~----GGi~~ 209 (253)
T 1h5y_A 139 EYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSVR----IPVIAS----GGAGR 209 (253)
T ss_dssp SSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHCS----SCEEEE----SCCCS
T ss_pred CcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhcC----CCEEEe----CCCCC
Confidence 00000 0012345577888899999887 3433332211 2345566666542 334332 3444
Q ss_pred HHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhc
Q 013498 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 296 ~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~ 336 (442)
..|...++++||+.|=+.=.=+ + +.-+++++...|+..
T Consensus 210 ~~~~~~~~~~Ga~~v~vgsal~--~-~~~~~~~~~~~l~~~ 247 (253)
T 1h5y_A 210 VEHFYEAAAAGADAVLAASLFH--F-RVLSIAQVKRYLKER 247 (253)
T ss_dssp HHHHHHHHHTTCSEEEESHHHH--T-TSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcHHHHHHHHH--c-CCCCHHHHHHHHHHc
Confidence 3778888889999863321101 1 223477777777765
No 60
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=95.22 E-value=2.2 Score=41.39 Aligned_cols=200 Identities=11% Similarity=0.081 Sum_probs=119.2
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee--
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-- 157 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~-- 157 (442)
...+|-|+ .+-.-+.++..++++...+.|+..+-+ +|.. ++...+.+..+ . ..+..+.+|
T Consensus 59 a~~IDhTl------L~p~~T~~dI~~lc~eA~~~g~aaVCV-~P~~-------V~~a~~~L~~s---~-V~V~tVigFP~ 120 (288)
T 3oa3_A 59 AQIIDHTQ------LSLSATGSQIDVLCAEAKEYGFATVCV-RPDY-------VSRAVQYLQGT---Q-VGVTCVIGFHE 120 (288)
T ss_dssp GGGEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGGG-------HHHHHHHTTTS---S-CEEEEEESTTT
T ss_pred HHhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEE-CHHH-------HHHHHHHcCCC---C-CeEEEEeCCCC
Confidence 45788888 234578999999999999999999988 4533 33333433221 0 112233343
Q ss_pred cccc-hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHH
Q 013498 158 SRCN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 236 (442)
Q Consensus 158 ~r~~-~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l 236 (442)
+... ..-+..+-+++ ..|.+.|.+.+....+ ..-..+.+.+.+....+.+.+.. +-+-+|. ...+.+.+
T Consensus 121 G~~~~~~Kv~Ea~~Ai-~~GAdEIDmVINig~l-----k~g~~~~v~~eI~~V~~a~~~~~---lKVIlEt-~~Lt~eei 190 (288)
T 3oa3_A 121 GTYSTDQKVSEAKRAM-QNGASELDMVMNYPWL-----SEKRYTDVFQDIRAVRLAAKDAI---LKVILET-SQLTADEI 190 (288)
T ss_dssp SCSCHHHHHHHHHHHH-HTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSE---EEEECCG-GGCCHHHH
T ss_pred CCCcHHHHHHHHHHHH-HcCCCEEEEEeehhhh-----cCCcHHHHHHHHHHHHHHhcCCC---ceEEEEC-CCCCHHHH
Confidence 1111 11122222332 3599999988765431 23466778888877777665432 3333332 34567888
Q ss_pred HHHHHHHHHcCCcEEeccC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 237 YEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laD--T~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
...++.+.++|+|.|--.- +.|-++++++. +++.+.+..++ +++|=.=. .-- -...+++-+++||++|=+|
T Consensus 191 ~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~-lmr~~v~~~g~--~v~VKAAG--GIr-t~edAl~mi~aGA~RiGtS 263 (288)
T 3oa3_A 191 IAGCVLSSLAGADYVKTSTGFNGPGASIENVS-LMSAVCDSLQS--ETRVKASG--GIR-TIEDCVKMVRAGAERLGAS 263 (288)
T ss_dssp HHHHHHHHHTTCSEEECCCSSSSCCCCHHHHH-HHHHHHHHSSS--CCEEEEES--SCC-SHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHH-HHHHHHHHhCC--CceEEEeC--CCC-CHHHHHHHHHcCCceeehh
Confidence 9999999999999988772 13467888865 45555443322 13332211 111 1378899999999987443
No 61
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.21 E-value=0.78 Score=44.97 Aligned_cols=225 Identities=17% Similarity=0.145 Sum_probs=129.5
Q ss_pred HHHHhHcCCCEEEE-c---------cCCCCh----hHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 107 ARQLAKLGVDIIEA-G---------FPAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 107 a~~L~~~GV~~IEv-G---------~p~~~~----~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
++.++++|++.|=+ | +|.... +....++.+++... -.|.+. ||+ +...+.+.
T Consensus 31 A~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--------~~PviaD~d~Gyg--~~~~v~~t 100 (302)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISP--------STPVIADADTGYG--GPIMVART 100 (302)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTST--------TSCEEEECTTTTS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhcc--------CCCEEEECCCCCC--CHHHHHHH
Confidence 66788899999987 4 232221 12334444443211 123333 333 45556666
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-CCCC-CCCHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAG-RSDRKFLYEILGEV 243 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~-edas-r~d~~~l~~~~~~~ 243 (442)
.+.+..+|+..|++-..+.+- |+..+-=.+.++.+++++.+++.+++.|.+ +.+.. .|+. ....+...+-++..
T Consensus 101 v~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d-~~I~ARTDa~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 101 TEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSD-IVVIARTDSLQTHGYEESVARLRAA 179 (302)
T ss_dssp HHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCC-CEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCC-EEEEEEecccccCCHHHHHHHHHHH
Confidence 676777899999998877654 222111237899999999888777766654 22222 1221 12356677777888
Q ss_pred HHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCc
Q 013498 244 IKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN 323 (442)
Q Consensus 244 ~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGN 323 (442)
.++|||.|.+. |.-+++++.++.+.+.. +| +.+-+-.......-.. -.--+.|++.|-..... -|+-+
T Consensus 180 ~eAGAD~ifi~---g~~~~~ei~~~~~~~~~-~P----l~~n~~~~g~~p~~~~--~eL~~lGv~~v~~~~~~--~raa~ 247 (302)
T 3fa4_A 180 RDAGADVGFLE---GITSREMARQVIQDLAG-WP----LLLNMVEHGATPSISA--AEAKEMGFRIIIFPFAA--LGPAV 247 (302)
T ss_dssp HTTTCSEEEET---TCCCHHHHHHHHHHTTT-SC----EEEECCTTSSSCCCCH--HHHHHHTCSEEEETTTT--HHHHH
T ss_pred HHcCCCEEeec---CCCCHHHHHHHHHHhcC-Cc----eeEEEecCCCCCCCCH--HHHHHcCCCEEEEchHH--HHHHH
Confidence 89999999884 56788888887776631 22 3232222222221122 33345699888443332 36777
Q ss_pred ccHHHHHHHHHhccccccCCccCCCChhHHHHHH
Q 013498 324 ASLEEVVMAFKCRGEHILGGLYTGINTRHIVMAS 357 (442)
Q Consensus 324 a~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls 357 (442)
.++++.+..|...|.. +.+..+..+.|+++-
T Consensus 248 ~A~~~~~~~i~~~g~~---~~~~~~~~~el~~~~ 278 (302)
T 3fa4_A 248 AAMREAMEKLKRDGIP---GLDKEMTPQMLFRVC 278 (302)
T ss_dssp HHHHHHHHHHHHHSSC---CCCTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCC---CcccCCCHHHHHHHc
Confidence 7888888888776521 223334455555443
No 62
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.17 E-value=1.6 Score=42.26 Aligned_cols=163 Identities=17% Similarity=0.234 Sum_probs=94.4
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCC----hhHHHHHHHHHHHhcccccccCCcc
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYV 151 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~ 151 (442)
+-|+-.|. |-.+--|..++.+..++.++.+.+.|.++|.+|. |.+. .+|++.+..+.+.+.... . +
T Consensus 18 mGilN~Tp-dSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~----~-~ 91 (282)
T 1aj0_A 18 MGILNVTP-DSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF----E-V 91 (282)
T ss_dssp EEEEECCT-TTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC----C-C
T ss_pred EEEEeCCC-CccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc----C-C
Confidence 45677776 3332224457889999999999999999999996 3321 345554444444332110 1 1
Q ss_pred ceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-C
Q 013498 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-R 230 (442)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r 230 (442)
| |+.=+ .+.+-++.|+++ |.+.|+ .+|-. ...++++.+++.|.. +........ +
T Consensus 92 p-iSIDT-~~~~va~aAl~a----Ga~iIN---dvsg~---------------~d~~~~~~~a~~~~~-vVlmh~~G~p~ 146 (282)
T 1aj0_A 92 W-ISVDT-SKPEVIRESAKV----GAHIIN---DIRSL---------------SEPGALEAAAETGLP-VCLMHMQGNPK 146 (282)
T ss_dssp E-EEEEC-CCHHHHHHHHHT----TCCEEE---ETTTT---------------CSTTHHHHHHHHTCC-EEEECCSSCTT
T ss_pred e-EEEeC-CCHHHHHHHHHc----CCCEEE---ECCCC---------------CCHHHHHHHHHhCCe-EEEEccCCCCc
Confidence 2 33222 356667777764 888775 33321 011456667788886 444332111 1
Q ss_pred -----C---C-----HHHHHHHHHHHHHcCCc--EEeccCc-cccc-CHHHHHHHHHHHHH
Q 013498 231 -----S---D-----RKFLYEILGEVIKVGAT--TLNIPDT-VGIT-MPTEFGKLIADIKA 274 (442)
Q Consensus 231 -----~---d-----~~~l~~~~~~~~~~Gad--~I~laDT-~G~~-~P~~v~~li~~l~~ 274 (442)
. | .+++.+.++.+.++|++ .|.| |. +|.. ++++-.++++.+.+
T Consensus 147 tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DPg~gf~k~~~~n~~ll~~l~~ 206 (282)
T 1aj0_A 147 TMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLL-DPGFGFGKNLSHNYSLLARLAE 206 (282)
T ss_dssp CCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTGGG
T ss_pred cccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccCHHHHHHHHHHHHH
Confidence 1 1 67888999999999987 4554 43 2222 35555666666653
No 63
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.17 E-value=0.078 Score=49.12 Aligned_cols=167 Identities=17% Similarity=0.158 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeeccc-c-hhhHHHHHHHHHhC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N-ERDIKTAWEAVKYA 175 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~-~-~~dI~~a~e~l~~~ 175 (442)
.+.++-+++++.+ +.|++.+|+|+|-....-.+.++.+++...+. +.+..+--. . ...++.+.+ +
T Consensus 16 ~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~--------~i~ld~~l~d~p~~~~~~~~~----a 82 (218)
T 3jr2_A 16 TNLTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNH--------ILVCDMKTTDGGAILSRMAFE----A 82 (218)
T ss_dssp SSHHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTS--------EEEEEEEECSCHHHHHHHHHH----H
T ss_pred CCHHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCC--------cEEEEEeecccHHHHHHHHHh----c
Confidence 4688899999997 56999999998743222346777777652110 111111111 1 122344444 5
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-ccCCCCCCCHHHHHHHHHHHHHcCCcEEecc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f-~~edasr~d~~~l~~~~~~~~~~Gad~I~la 254 (442)
|++.+.+.....+ +.+.++++.+++.|.. +.+ .+ -. .+++.+.+ +.+.|+|.+.+-
T Consensus 83 Gad~i~vh~~~~~---------------~~~~~~~~~~~~~g~~-~~~d~l-~~--~T~~~~~~----~~~~g~d~v~~~ 139 (218)
T 3jr2_A 83 GADWITVSAAAHI---------------ATIAACKKVADELNGE-IQIEIY-GN--WTMQDAKA----WVDLGITQAIYH 139 (218)
T ss_dssp TCSEEEEETTSCH---------------HHHHHHHHHHHHHTCE-EEEECC-SS--CCHHHHHH----HHHTTCCEEEEE
T ss_pred CCCEEEEecCCCH---------------HHHHHHHHHHHHhCCc-cceeee-ec--CCHHHHHH----HHHcCccceeee
Confidence 8998776543321 2344667778888975 433 11 11 23443333 345599976541
Q ss_pred -----Ccccc-cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 255 -----DTVGI-TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 255 -----DT~G~-~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
.+.|. ..|..+ +.++.++. + ++++.+= .|.-..|+-.++++||+.+
T Consensus 140 ~~~~~~~~g~~~~~~~l-~~i~~~~~--~---~~pi~v~----GGI~~~~~~~~~~aGAd~v 191 (218)
T 3jr2_A 140 RSRDAELAGIGWTTDDL-DKMRQLSA--L---GIELSIT----GGIVPEDIYLFEGIKTKTF 191 (218)
T ss_dssp CCHHHHHHTCCSCHHHH-HHHHHHHH--T---TCEEEEE----SSCCGGGGGGGTTSCEEEE
T ss_pred eccccccCCCcCCHHHH-HHHHHHhC--C---CCCEEEE----CCCCHHHHHHHHHcCCCEE
Confidence 11133 234333 33444443 1 2344432 3333456667889998886
No 64
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.15 E-value=0.81 Score=43.36 Aligned_cols=171 Identities=13% Similarity=0.037 Sum_probs=100.3
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccc-----------hhhHHHHH
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-----------ERDIKTAW 169 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~-----------~~dI~~a~ 169 (442)
++-.++++.+.+.|++.|.+- | ..++.+.+.. . +-.+.+..+.-.. .+.++.++
T Consensus 45 ~~~~~~~~~~~~~g~~~i~~~-~-------~~~~~~~~~~----~---~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~ 109 (273)
T 2qjg_A 45 IDIRKTVNDVAEGGANAVLLH-K-------GIVRHGHRGY----G---KDVGLIIHLSGGTAISPNPLKKVIVTTVEEAI 109 (273)
T ss_dssp SSHHHHHHHHHHHTCSEEEEC-H-------HHHHSCCCSS----S---CCCEEEEECEECCTTSSSTTCCEECSCHHHHH
T ss_pred hhHHHHHHHHHhcCCCEEEeC-H-------HHHHHHHHhh----c---CCCCEEEEEcCCCcCCCCcccchHHHHHHHHH
Confidence 445588999999999999862 2 1222111111 0 1123333222111 45566665
Q ss_pred HHHHhCCCCEE--EEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-CCCC----CCCHHHHHHHHHH
Q 013498 170 EAVKYAKRPRI--HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAG----RSDRKFLYEILGE 242 (442)
Q Consensus 170 e~l~~~g~~~v--~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~-edas----r~d~~~l~~~~~~ 242 (442)
+ .|++.| .+..... +.++.++.+.++++.+++.|.. +.+.. .+.. ..+++.+.++++.
T Consensus 110 ~----~Ga~~v~~~l~~~~~----------~~~~~~~~~~~v~~~~~~~g~~-viv~~~~~G~~l~~~~~~~~~~~~a~~ 174 (273)
T 2qjg_A 110 R----MGADAVSIHVNVGSD----------EDWEAYRDLGMIAETCEYWGMP-LIAMMYPRGKHIQNERDPELVAHAARL 174 (273)
T ss_dssp H----TTCSEEEEEEEETST----------THHHHHHHHHHHHHHHHHHTCC-EEEEEEECSTTCSCTTCHHHHHHHHHH
T ss_pred H----cCCCEEEEEEecCCC----------CHHHHHHHHHHHHHHHHHcCCC-EEEEeCCCCcccCCCCCHhHHHHHHHH
Confidence 5 489988 5444422 4567788899999999999986 43311 1211 1456677777789
Q ss_pred HHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCC---cchHHHHHHHHHHhCCCEEEe
Q 013498 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND---LGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 243 ~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HND---lGLA~ANalaAl~aGa~~vd~ 312 (442)
+.+.|+|.|.+.-+ ..+ ++++.+++.++ +++-.|.=-+ .--++.....++++||+.|-+
T Consensus 175 a~~~Gad~i~~~~~---~~~----~~l~~i~~~~~----ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 175 GAELGADIVKTSYT---GDI----DSFRDVVKGCP----APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHHTTCSEEEECCC---SSH----HHHHHHHHHCS----SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHcCCCEEEECCC---CCH----HHHHHHHHhCC----CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 99999998888743 223 34555665553 5677666322 222333366677899987754
No 65
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=95.14 E-value=0.79 Score=43.97 Aligned_cols=194 Identities=14% Similarity=0.066 Sum_probs=116.8
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR 159 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r 159 (442)
-..+|-|+ .+-.-+.++..++.+...+.|+..+-+ +|...+ ...+.+..+ . ..+..+.+|--
T Consensus 44 a~~IDhTl------L~p~~t~~~I~~lc~eA~~~~~aaVCV-~p~~V~-------~a~~~L~gs---~-v~v~tVigFP~ 105 (260)
T 3r12_A 44 KSAIEHTN------LKPFATPDDIKKLCLEARENRFHGVCV-NPCYVK-------LAREELEGT---D-VKVVTVVGFPL 105 (260)
T ss_dssp HHHEEEEE------CCTTCCHHHHHHHHHHHHHTTCSEEEE-CGGGHH-------HHHHHHTTS---C-CEEEEEESTTT
T ss_pred HHhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEE-CHHHHH-------HHHHHhcCC---C-CeEEEEecCCC
Confidence 45788887 233578999999999999999999998 664433 222322221 0 01112223221
Q ss_pred c-ch-----hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCH
Q 013498 160 C-NE-----RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 233 (442)
Q Consensus 160 ~-~~-----~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~ 233 (442)
. .. .+++.|++ .|.+.|.+.+....+ ..-..+.+.+.+...++.+. |. .+-+-+|. ...+.
T Consensus 106 G~~~~~~Kv~Ea~~Ai~----~GAdEIDmViNig~l-----k~g~~~~v~~eI~~v~~a~~--~~-~lKVIlEt-~~Lt~ 172 (260)
T 3r12_A 106 GANETRTKAHEAIFAVE----SGADEIDMVINVGML-----KAKEWEYVYEDIRSVVESVK--GK-VVKVIIET-CYLDT 172 (260)
T ss_dssp CCSCHHHHHHHHHHHHH----HTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTT--TS-EEEEECCG-GGCCH
T ss_pred CCCcHHHHHHHHHHHHH----cCCCEEEEEeehhhh-----ccccHHHHHHHHHHHHHhcC--CC-cEEEEEeC-CCCCH
Confidence 1 11 12333444 399999998876532 22366777787777777654 43 24444443 45677
Q ss_pred HHHHHHHHHHHHcCCcEEeccCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 234 KFLYEILGEVIKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT--~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
+.+...++.+.++|||.|--.-- .|.++++++.-+-+.+ ++ +++|=.=. .-- -...+++-+++||++|=
T Consensus 173 eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~v----g~--~v~VKaAG--GIr-t~~~al~mi~aGA~RiG 243 (260)
T 3r12_A 173 EEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIV----GD--EMGVKASG--GIR-TFEDAVKMIMYGADRIG 243 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHH----CT--TSEEEEES--SCC-SHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHh----CC--CceEEEeC--CCC-CHHHHHHHHHcCCceee
Confidence 88999999999999999887721 2467887766554443 22 12222211 111 12677778999999874
Q ss_pred ec
Q 013498 312 VT 313 (442)
Q Consensus 312 ~T 313 (442)
+|
T Consensus 244 tS 245 (260)
T 3r12_A 244 TS 245 (260)
T ss_dssp ES
T ss_pred cc
Confidence 44
No 66
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.14 E-value=2.5 Score=40.89 Aligned_cols=215 Identities=14% Similarity=0.129 Sum_probs=128.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+-.+.++ ++.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la- 95 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-------KRVPVIAGTGANNTVEAIALS- 95 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHH-
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHH-
Confidence 478888899999999999998877 4 344556664 45555555542 2357888877555444 4444
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
+..+.+|++.+-+..|-. ++.+.++.++-..+.++. .++.-+-++.+. ....+++.+.+++ + -
T Consensus 96 ~~a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 160 (297)
T 3flu_A 96 QAAEKAGADYTLSVVPYY-------NKPSQEGIYQHFKTIAEA---TSIPMIIYNVPGRTVVSMTNDTILRLA----E-I 160 (297)
T ss_dssp HHHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSSCCCHHHHHHHT----T-S
T ss_pred HHHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEECCchhccCCCHHHHHHHH----c-C
Confidence 334567999887765532 244666666655554443 355544555532 3455677665554 3 3
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++ ..++ +..+ +-++++ ..+.++..|++.+ +. ..+|...+
T Consensus 161 pnivgiKdssgd--~~~~~~~~~----~~~~--~f~v-~~G~d~------~~l~~l~~G~~G~---is----~~an~~P~ 218 (297)
T 3flu_A 161 PNIVGVKEASGN--IGSNIELIN----RAPE--GFVV-LSGDDH------TALPFMLCGGHGV---IT----VAANAAPK 218 (297)
T ss_dssp TTEEEEEECSCC--HHHHHHHHH----HSCT--TCEE-EECCGG------GHHHHHHTTCCEE---EE----SGGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHH----hcCC--CeEE-EECcHH------HHHHHHhCCCCEE---Ee----chHhhhHH
Confidence 578999999884 455555544 3332 2222 334332 2467788898654 22 24677777
Q ss_pred HHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhC
Q 013498 328 EVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTG 365 (442)
Q Consensus 328 evv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g 365 (442)
.++...+... .=|.+.-.++-+.+..+..
T Consensus 219 ~~~~l~~a~~---------~Gd~~~A~~l~~~l~~l~~ 247 (297)
T 3flu_A 219 LFADMCRAAL---------QGDIALARELNDRLIPIYD 247 (297)
T ss_dssp HHHHHHHHHH---------HTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH---------CCCHHHHHHHHHHHHHHHH
Confidence 7666555421 1156666666666665543
No 67
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.02 E-value=2.9 Score=40.93 Aligned_cols=195 Identities=11% Similarity=0.125 Sum_probs=118.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~st~~ai~la~ 111 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVA-------KRVPVVAGAGSNSTSEAVELAK 111 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 478889999999999999999876 4 355556664 45565555542 2357788877655444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
....+|++.+-+..|-. ++.+.++.++-....++. .++.-+-++.+. ....+++.+.++++. .
T Consensus 112 -~A~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La~~---~- 176 (315)
T 3si9_A 112 -HAEKAGADAVLVVTPYY-------NRPNQRGLYTHFSSIAKA---ISIPIIIYNIPSRSVIDMAVETMRDLCRD---F- 176 (315)
T ss_dssp -HHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHHHH---C-
T ss_pred -HHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHc---CCCCEEEEeCchhhCCCCCHHHHHHHHhh---C-
Confidence 34567999887765532 244666666655554443 355545555542 345667766665531 3
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|-+ .++.++++... ++ ..+ +-+.++ ..+.++..|++.+ +. ..+|...+
T Consensus 177 pnIvgiKdssgd~--~~~~~l~~~~~---~~---f~v-~~G~d~------~~l~~l~~G~~G~---is----~~an~~P~ 234 (315)
T 3si9_A 177 KNIIGVKDATGKI--ERASEQREKCG---KD---FVQ-LSGDDC------TALGFNAHGGVGC---IS----VSSNVAPK 234 (315)
T ss_dssp TTEEEEEECSCCT--HHHHHHHHHHC---SS---SEE-EESCGG------GHHHHHHTTCCEE---EE----SGGGTCHH
T ss_pred CCEEEEEeCCCCH--HHHHHHHHHcC---CC---eEE-EecCHH------HHHHHHHcCCCEE---Ee----cHHHhhHH
Confidence 5889999998863 55666555432 22 222 334333 2467788898754 22 24677777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 235 ~~~~l~~a 242 (315)
T 3si9_A 235 LCAQLHAA 242 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665554
No 68
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=95.02 E-value=2.4 Score=39.85 Aligned_cols=211 Identities=14% Similarity=0.048 Sum_probs=113.2
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~ 156 (442)
+.++-+...++++ .+.+ +.++.+.++|++.||+.... .+.+.+.++.+.+..+-. +..+..
T Consensus 25 ~mklg~~~~~~~~--------~~~~---~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gl~-------v~~~~~ 85 (287)
T 3kws_A 25 ELKLSFQEGIAPG--------ESLN---EKLDFMEKLGVVGFEPGGGG-LAGRVNEIKQALNGRNIK-------VSAICA 85 (287)
T ss_dssp CCEEEEETTSSCC--------SSHH---HHHHHHHHTTCCEEECBSTT-CGGGHHHHHHHHTTSSCE-------ECEEEC
T ss_pred eeeEEEEecccCC--------CCHH---HHHHHHHHcCCCEEEecCCc-hHHHHHHHHHHHHHcCCe-------EEEEec
Confidence 3457777778776 2444 45666777899999997652 245556666555432211 111211
Q ss_pred ec-----ccch-------hhHHHHHHHHHhCCCCEEEEeecCChHH-HHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013498 157 LS-----RCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIH-MEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (442)
Q Consensus 157 ~~-----r~~~-------~dI~~a~e~l~~~g~~~v~i~~~~Sd~h-~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f 223 (442)
.. ..++ +.++.+++.....|.+.|.+........ .........+...+.+.+++++|++.|+. +.+
T Consensus 86 ~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~l 164 (287)
T 3kws_A 86 GFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTS-VIF 164 (287)
T ss_dssp CCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEE
Confidence 10 1111 3455666766778999887643211000 00000012455677778888899999974 655
Q ss_pred ccCC----CCCCCHHHHHHHHHHHHHcCCcEEec-cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHH
Q 013498 224 SPED----AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTA 297 (442)
Q Consensus 224 ~~ed----asr~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~-P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~A 297 (442)
-... ..-.+++.+.++++.+ +.+.+.+ -||.=... -....+.++.+.. -...+|.+|..+-
T Consensus 165 E~~~~~~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHlkD~~~r--- 231 (287)
T 3kws_A 165 EPLNRKECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWEETSDMGAFISGGE-------YLQHVHVASRKRR--- 231 (287)
T ss_dssp CCCCTTTCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEECCTTTS---
T ss_pred EecCcccCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhcCCCHHHHHHHhhh-------hEEEEEeCCCCCC---
Confidence 3222 1123566666666654 4333333 35532110 0112233333322 3467999987411
Q ss_pred HHHHHHHhCCCEEEecccccccccCc--ccHHHHHHHHHhcccc
Q 013498 298 NTIAGACAGARQVEVTINGIGERAGN--ASLEEVVMAFKCRGEH 339 (442)
Q Consensus 298 NalaAl~aGa~~vd~Tv~GlGeraGN--a~lEevv~~L~~~g~~ 339 (442)
.. .| .|+ .+..+++..|+..|.+
T Consensus 232 ---------------~~--pG--~G~d~id~~~i~~~L~~~gy~ 256 (287)
T 3kws_A 232 ---------------SM--PG--EDGDADNYINGFKGLKMIGYN 256 (287)
T ss_dssp ---------------CS--TT--TTGGGCCCHHHHHHHHHTTCC
T ss_pred ---------------CC--CC--CCCCCcCHHHHHHHHHHcCCC
Confidence 11 23 588 9999999999987643
No 69
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.01 E-value=0.95 Score=41.14 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=96.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeec-ccchhhHHHHHHHHHhCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~-r~~~~dI~~a~e~l~~~g 176 (442)
.+.++-.++++.+.+.|++.||+..+. +...+.++.+.+..+. +.+.+.+ -.+.++++.+++ +|
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~--~~~~~~i~~i~~~~~~---------~l~vg~g~~~~~~~i~~a~~----~G 80 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS--PQWEQSIPAIVDAYGD---------KALIGAGTVLKPEQVDALAR----MG 80 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS--TTHHHHHHHHHHHHTT---------TSEEEEECCCSHHHHHHHHH----TT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHhCCC---------CeEEEeccccCHHHHHHHHH----cC
Confidence 467888999999999999999997653 4445667776654321 1222211 124556776665 48
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT 256 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT 256 (442)
.+.|+ .+..+ .+.++.+++.|.. +.+++ .+++.+ ..+.+.|+|.|.+-.|
T Consensus 81 ad~V~--~~~~~------------------~~~~~~~~~~g~~-~~~g~-----~t~~e~----~~a~~~G~d~v~v~~t 130 (212)
T 2v82_A 81 CQLIV--TPNIH------------------SEVIRRAVGYGMT-VCPGC-----ATATEA----FTALEAGAQALKIFPS 130 (212)
T ss_dssp CCEEE--CSSCC------------------HHHHHHHHHTTCE-EECEE-----CSHHHH----HHHHHTTCSEEEETTH
T ss_pred CCEEE--eCCCC------------------HHHHHHHHHcCCC-EEeec-----CCHHHH----HHHHHCCCCEEEEecC
Confidence 89886 22221 1345677888874 54442 345543 3456789999886332
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 257 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 257 ~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
- + .-.+.++.+++.++. +++|..= -|....|....+++||+.|-+
T Consensus 131 ~----~-~g~~~~~~l~~~~~~--~ipvia~----GGI~~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 131 S----A-FGPQYIKALKAVLPS--DIAVFAV----GGVTPENLAQWIDAGCAGAGL 175 (212)
T ss_dssp H----H-HCHHHHHHHHTTSCT--TCEEEEE----SSCCTTTHHHHHHHTCSEEEE
T ss_pred C----C-CCHHHHHHHHHhccC--CCeEEEe----CCCCHHHHHHHHHcCCCEEEE
Confidence 1 1 123566667766651 2455432 344456778888899999864
No 70
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.00 E-value=2.7 Score=40.66 Aligned_cols=163 Identities=16% Similarity=0.208 Sum_probs=90.3
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCC----hhHHHHHHHHHHHhcccccccCCcc
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESGYV 151 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~ 151 (442)
.-|+-+|. |-..--|..++.+..++.++.+.+.|-++|.+|. |.+. +++++.+..+.+.+... . +
T Consensus 9 mgilN~Tp-DSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-----~-~ 81 (280)
T 1eye_A 9 MGVLNVTD-DSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-----G-I 81 (280)
T ss_dssp EEEEECSC-CTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-----T-C
T ss_pred EEEEeCCC-CCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-----C-C
Confidence 34566665 3332224457899999999999999999999996 3321 23444333333332110 1 1
Q ss_pred ceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC----
Q 013498 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---- 227 (442)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed---- 227 (442)
| |+.=+ .+.+-++.|+++ |.+.|+ .+|-. ... .++++.+++.|+. +......
T Consensus 82 p-iSIDT-~~~~va~aAl~a----Ga~iIN---dvsg~------~~d--------~~m~~~~a~~~~~-vVlmh~~G~p~ 137 (280)
T 1eye_A 82 T-VSIDT-MRADVARAALQN----GAQMVN---DVSGG------RAD--------PAMGPLLAEADVP-WVLMHWRAVSA 137 (280)
T ss_dssp C-EEEEC-SCHHHHHHHHHT----TCCEEE---ETTTT------SSC--------TTHHHHHHHHTCC-EEEECCCCSCT
T ss_pred E-EEEeC-CCHHHHHHHHHc----CCCEEE---ECCCC------CCC--------HHHHHHHHHhCCe-EEEEcCCCCCc
Confidence 2 22222 356667777764 777765 33310 101 1456667788886 4443321
Q ss_pred -CC-----CCC-----HHHHHHHHHHHHHcCCc--EEeccCc-cccc-CHHHHHHHHHHHHH
Q 013498 228 -AG-----RSD-----RKFLYEILGEVIKVGAT--TLNIPDT-VGIT-MPTEFGKLIADIKA 274 (442)
Q Consensus 228 -as-----r~d-----~~~l~~~~~~~~~~Gad--~I~laDT-~G~~-~P~~v~~li~~l~~ 274 (442)
.. ..| .+++.+.++.+.++|++ .|.| |. +|.. +.++-.++++.+.+
T Consensus 138 tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~Iil-DPg~Gf~k~~~~n~~ll~~l~~ 198 (280)
T 1eye_A 138 DTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVL-DPGLGFAKTAQHNWAILHALPE 198 (280)
T ss_dssp TCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHH
T ss_pred chhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEE-ECCCCcccCHHHHHHHHHHHHH
Confidence 11 112 67888899999999987 4544 43 2332 35555666666654
No 71
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=94.99 E-value=2.7 Score=41.11 Aligned_cols=195 Identities=16% Similarity=0.127 Sum_probs=116.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+-.+.++ |+.+-
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-------grvpViaGvg~~~t~~ai~la~ 113 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVA-------HRVPTIVSVSDLTTAKTVRRAQ 113 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478899999999999999998876 3 355566664 45565555542 2357788877555444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
....+|++.+-+..|-. ++.+.++.++-..+.++. .++.-+-++.+. ....+++.+.+++ .+.
T Consensus 114 -~A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~L~---a~~- 178 (315)
T 3na8_A 114 -FAESLGAEAVMVLPISY-------WKLNEAEVFQHYRAVGEA---IGVPVMLYNNPGTSGIDMSVELILRIV---REV- 178 (315)
T ss_dssp -HHHHTTCSEEEECCCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH---HHS-
T ss_pred -HHHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCcEEEEeCcchhCcCCCHHHHHHHH---hcC-
Confidence 34567999887765532 244666666655555443 355545555432 3455677666553 233
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++. .++ +..+ +-..++ ..+.++.+|++.+ +. ..+|...+
T Consensus 179 pnIvgiKdssgd--~~~~~~~~~~----~~~--~f~v-~~G~D~------~~l~~l~~G~~G~---is----~~an~~P~ 236 (315)
T 3na8_A 179 DNVTMVKESTGD--IQRMHKLRLL----GEG--RVPF-YNGCNP------LALEAFVAGAKGW---CS----AAPNLIPT 236 (315)
T ss_dssp TTEEEEEECSSC--HHHHHHHHHH----TTT--CSCE-EECCGG------GHHHHHHHTCSEE---EE----SGGGTCHH
T ss_pred CCEEEEECCCCC--HHHHHHHHHH----cCC--CEEE-EeCchH------HHHHHHHCCCCEE---Ee----chhhhCHH
Confidence 478999999984 3555555543 332 1222 223332 2467788898653 22 24567666
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 237 ~~~~l~~a 244 (315)
T 3na8_A 237 LNGQLYQA 244 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 72
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.92 E-value=3 Score=40.49 Aligned_cols=194 Identities=11% Similarity=0.158 Sum_probs=119.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCC-ccceEeeecccchhh-HHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESG-YVPVICGLSRCNERD-IKTA 168 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~-l~~~i~~~~r~~~~d-I~~a 168 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... + .+|.|++.+-.+.++ |+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------g~rvpviaGvg~~~t~~ai~la 96 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCK-------GTKVKVLAGAGSNATHEAVGLA 96 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEEECCCSSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCCeEEEeCCCCCHHHHHHHH
Confidence 477888899999999999999877 4 344555564 45555555542 3 357888877544444 4544
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHc
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~ 246 (442)
- ....+|++.+-+..|-. ++.+.++.++-..+.++. .++.-+-++.+. ....+++.+.+++ +.
T Consensus 97 ~-~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~ 161 (301)
T 3m5v_A 97 K-FAKEHGADGILSVAPYY-------NKPTQQGLYEHYKAIAQS---VDIPVLLYNVPGRTGCEISTDTIIKLF----RD 161 (301)
T ss_dssp H-HHHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCCCHHHHHHHH----HH
T ss_pred H-HHHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEeCchhhCcCCCHHHHHHHH----hc
Confidence 3 34567999887765532 244666666665555443 355534555432 4456777776665 34
Q ss_pred CCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccH
Q 013498 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 326 (442)
Q Consensus 247 Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~l 326 (442)
-...+.+.||.|- ..++.++++.. ++ ..+ +-.++++ .+.++..|++.+ +. ..+|...
T Consensus 162 ~pnivgiKdssgd--~~~~~~~~~~~----~~---f~v-~~G~d~~------~~~~l~~G~~G~---is----~~~n~~P 218 (301)
T 3m5v_A 162 CENIYGVKEASGN--IDKCVDLLAHE----PR---MML-ISGEDAI------NYPILSNGGKGV---IS----VTSNLLP 218 (301)
T ss_dssp CTTEEEEEECSSC--HHHHHHHHHHC----TT---SEE-EECCGGG------HHHHHHTTCCEE---EE----SGGGTCH
T ss_pred CCCEEEEEeCCCC--HHHHHHHHHhC----CC---eEE-EEccHHH------HHHHHHcCCCEE---Ee----hHHHhhH
Confidence 3578999999874 45666655443 33 223 4444432 456788897653 22 2467777
Q ss_pred HHHHHHHHh
Q 013498 327 EEVVMAFKC 335 (442)
Q Consensus 327 Eevv~~L~~ 335 (442)
+.++...+.
T Consensus 219 ~~~~~l~~a 227 (301)
T 3m5v_A 219 DMISALTHF 227 (301)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666554
No 73
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.90 E-value=1.8 Score=42.41 Aligned_cols=192 Identities=15% Similarity=0.157 Sum_probs=112.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (442)
+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-.
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~~ 97 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVN-------GRVPLIAGVGTNDTRDSIEFVKE 97 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSC-------SSSCEEEECCCSSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCcCHHHHHHHHHH
Confidence 66677788999999999997766 4 344556664 45555555432 3457888877654444 444433
Q ss_pred HHHhCCC-CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC--CCCCCCHHHHHHHHHHHHHcC
Q 013498 171 AVKYAKR-PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 171 ~l~~~g~-~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e--dasr~d~~~l~~~~~~~~~~G 247 (442)
...+|. +.+-+..|-. ++.+.++.++-....++. .++.-+-++.+ .....+++.+.+++ +.
T Consensus 98 -A~~~Ga~davlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 161 (311)
T 3h5d_A 98 -VAEFGGFAAGLAIVPYY-------NKPSQEGMYQHFKAIADA---SDLPIIIYNIPGRVVVELTPETMLRLA----DH- 161 (311)
T ss_dssp -HHHSCCCSEEEEECCCS-------SCCCHHHHHHHHHHHHHS---CSSCEEEEECHHHHSSCCCHHHHHHHH----TS-
T ss_pred -HHhcCCCcEEEEcCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEecccccCCCCCHHHHHHHh----cC-
Confidence 355675 8877665532 234666666554444333 35554455543 23456777776655 33
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.|+. ...++.++++ ..++ + +.+-+=+|- + .+.++..|++.+ +.| .+|...+
T Consensus 162 pnIvgiKdss---d~~~~~~~~~----~~~~--~--f~v~~G~d~-~----~l~~l~~Ga~G~---is~----~an~~P~ 218 (311)
T 3h5d_A 162 PNIIGVKECT---SLANMAYLIE----HKPE--E--FLIYTGEDG-D----AFHAMNLGADGV---ISV----ASHTNGD 218 (311)
T ss_dssp TTEEEEEECS---CHHHHHHHHH----HCCS--S--CEEEECCGG-G----HHHHHHHTCCEE---EES----THHHHHH
T ss_pred CCEEEEEeCC---CHHHHHHHHH----HcCC--C--EEEEECcHH-H----HHHHHHcCCCEE---Eec----hhhhCHH
Confidence 6899999987 5566655544 3442 1 233333332 2 356677898754 332 3577677
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 219 ~~~~l~~a 226 (311)
T 3h5d_A 219 EMHEMFTA 226 (311)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665553
No 74
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=94.89 E-value=0.12 Score=47.82 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++-+++++.|.+.|++.||+.+- .+...+.++.+.+ ... ..-.+. -...++++.++++ |.+
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k--~~~~~~~i~~~~~--~~~--------~~gag~-vl~~d~~~~A~~~----GAd 85 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLR--TEKGLEALKALRK--SGL--------LLGAGT-VRSPKEAEAALEA----GAA 85 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECS--STHHHHHHHHHTT--SSC--------EEEEES-CCSHHHHHHHHHH----TCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC--ChHHHHHHHHHhC--CCC--------EEEeCe-EeeHHHHHHHHHc----CCC
Confidence 3345688999999999999999863 4445566766655 221 011121 2355778888876 888
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG 258 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G 258 (442)
.++. +..+ .+.++.++..|.. +..++ .+++++ ..+.+.|+|.|.+- .
T Consensus 86 ~v~~--~~~d------------------~~v~~~~~~~g~~-~i~G~-----~t~~e~----~~A~~~Gad~v~~f---p 132 (207)
T 2yw3_A 86 FLVS--PGLL------------------EEVAALAQARGVP-YLPGV-----LTPTEV----ERALALGLSALKFF---P 132 (207)
T ss_dssp EEEE--SSCC------------------HHHHHHHHHHTCC-EEEEE-----CSHHHH----HHHHHTTCCEEEET---T
T ss_pred EEEc--CCCC------------------HHHHHHHHHhCCC-EEecC-----CCHHHH----HHHHHCCCCEEEEe---c
Confidence 8864 3222 1456777888875 44443 234443 34557899988771 1
Q ss_pred ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 259 ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 259 ~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
..+.--.++++.+++.+|+ +++..= =|....|.-+.+.+|++.+-
T Consensus 133 -a~~~gG~~~lk~l~~~~~~---ipvvai----GGI~~~n~~~~l~aGa~~va 177 (207)
T 2yw3_A 133 -AEPFQGVRVLRAYAEVFPE---VRFLPT----GGIKEEHLPHYAALPNLLAV 177 (207)
T ss_dssp -TTTTTHHHHHHHHHHHCTT---CEEEEB----SSCCGGGHHHHHTCSSBSCE
T ss_pred -CccccCHHHHHHHHhhCCC---CcEEEe----CCCCHHHHHHHHhCCCcEEE
Confidence 1111013667888888864 454322 24445688888888988753
No 75
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=94.86 E-value=3 Score=40.19 Aligned_cols=235 Identities=16% Similarity=0.136 Sum_probs=134.7
Q ss_pred CCCCCCCCCCCCceEEEeCCCCcCCCCCCCC--C-CHHHHHHHHHHHhHcCCCEEEEc--c-CCCCh-hH-HHHHHHHHH
Q 013498 67 PEYIPNRIPDPNYVRVFDTTLRDGEQSPGAT--L-TSKEKLDIARQLAKLGVDIIEAG--F-PAASK-ED-FEAVRTIAK 138 (442)
Q Consensus 67 ~~~~~~~~~~~~~V~I~DtTLRDG~Q~~g~~--f-s~e~kl~ia~~L~~~GV~~IEvG--~-p~~~~-~d-~e~v~~l~~ 138 (442)
.-|++|.... .|+|-++++-+|.-.--++ . +.++.+..++.+.+.|.|.||+= + ....+ ++ .+.++.+.+
T Consensus 17 ~~~~~~~~m~--~v~v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~ 94 (276)
T 3o1n_A 17 NLYFQSNAMK--TVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIRE 94 (276)
T ss_dssp --------CC--CEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHH
T ss_pred heeeccCCce--EEEECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHH
Confidence 4577777764 4888899998875432223 2 45777788888888999999993 2 21111 22 234444444
Q ss_pred HhcccccccCCccceEeeecccchh---------hHHHHHHHHHhCC-CCEEEEeecCChHHHHHHhCCCHHHHHHHHHH
Q 013498 139 EVGNAVDAESGYVPVICGLSRCNER---------DIKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARS 208 (442)
Q Consensus 139 ~~~~~~~~~~~l~~~i~~~~r~~~~---------dI~~a~e~l~~~g-~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~ 208 (442)
..+. .|.|.. .|...+ .-...++.+...| ++.|-+-....+ +.+.+
T Consensus 95 ~~~~--------~PiI~T-~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~---------------~~~~~ 150 (276)
T 3o1n_A 95 IITD--------KPLLFT-FRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGD---------------DEVKA 150 (276)
T ss_dssp HCCS--------SCEEEE-CCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCH---------------HHHHH
T ss_pred hcCC--------CCEEEE-EEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCH---------------HHHHH
Confidence 3211 244433 243221 1111222222336 778777544332 23456
Q ss_pred HHHHHHHcCCCeEEEccCCCCC-CCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHH---hCCCCcceeE
Q 013498 209 MVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKA---NTPGIENVVI 284 (442)
Q Consensus 209 ~v~~ar~~G~~~V~f~~edasr-~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~---~~p~~~~v~i 284 (442)
+++.+++.|.+ |..+.-|... .+.+.+.+.++.+.+.|+|.+.|+=+ .-.+.++.++.....+ ..++ .|+
T Consensus 151 l~~~a~~~~~k-vI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~--a~s~~Dvl~Ll~~~~~~~~~~~~---~Pl 224 (276)
T 3o1n_A 151 TVGYAHQHNVA-VIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVM--PQTKADVLTLLTATVEMQERYAD---RPI 224 (276)
T ss_dssp HHHHHHHTTCE-EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEEC--CSSHHHHHHHHHHHHHHHHHTCC---SCC
T ss_pred HHHHHHhCCCE-EEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEec--CCChHHHHHHHHHHHHHHhcCCC---CCE
Confidence 77778888874 5554333222 24578999999999999999999844 3566777777766533 2333 345
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhc
Q 013498 285 STHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 285 ~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~ 336 (442)
-.-+=-.+| .-.-+.+-..|-....+++ |-....|..+++++-..|...
T Consensus 225 Ia~~MG~~G--~~SRi~~~~~GS~vTf~~l-~~~sAPGQl~~~~l~~~l~~l 273 (276)
T 3o1n_A 225 ITMSMSKTG--VISRLAGEVFGSAATFGAV-KKASAPGAISVADLRTVLTIL 273 (276)
T ss_dssp EEEECSGGG--THHHHCHHHHTCCEEECBS-SCCSSTTCCBHHHHHHHHHHH
T ss_pred EEEECCCch--hhHHHHHHHhCCceEecCC-CCCCCCCCCCHHHHHHHHHHh
Confidence 443333333 3444555566888888887 444578999999988777653
No 76
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.84 E-value=3 Score=40.21 Aligned_cols=194 Identities=12% Similarity=0.132 Sum_probs=115.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 90 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLAD-------GRIPVIAGTGANATAEAISLTQ 90 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccHHHHHHHHH
Confidence 378888899999999999999877 4 455566664 45565555542 2357888877655444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. ...+|++.+-+..|-. ++.+.++.++-....++ ..++.-+-++.+. ....+++.+.+++ +.
T Consensus 91 ~-a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 154 (292)
T 2ojp_A 91 R-FNDSGIVGCLTVTPYY-------NRPSQEGLYQHFKAIAE---HTDLPQILYNVPSRTGCDLLPETVGRLA----KV- 154 (292)
T ss_dssp H-TTTSSCSEEEEECCCS-------SCCCHHHHHHHHHHHHT---TCSSCEEEECCHHHHSCCCCHHHHHHHH----TS-
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCcchhccCCCHHHHHHHH----cC-
Confidence 3 4567999887665532 23466666665554433 2355534555432 3346777776665 32
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|-+ .++.+++ +..++ +..+ +-.++++ .+.++..|++.+ +.| .+|...+
T Consensus 155 pnivgiK~s~gd~--~~~~~~~----~~~~~--~f~v-~~G~d~~------~~~~l~~G~~G~---is~----~~n~~P~ 212 (292)
T 2ojp_A 155 KNIIGIXEATGNL--TRVNQIK----ELVSD--DFVL-LSGDDAS------ALDFMQYGGHGV---ISV----TANVAAR 212 (292)
T ss_dssp TTEEEC-CCSCCT--HHHHHHH----TTSCT--TSBC-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEeCCCCCH--HHHHHHH----HhcCC--CEEE-EECcHHH------HHHHHHCCCcEE---EeC----HHHhhHH
Confidence 6799999999853 3444443 33432 2222 3344432 456778898644 332 4577777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 213 ~~~~l~~a 220 (292)
T 2ojp_A 213 DMAQMCKL 220 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665543
No 77
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.82 E-value=1.8 Score=41.86 Aligned_cols=195 Identities=13% Similarity=0.107 Sum_probs=117.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|.+.+..+.++ ++.+-
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 91 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD-------KRVPVIAGTGTNDTEKSIQASI 91 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcccHHHHHHHHH
Confidence 467788889999999999998876 3 355566664 45565555542 3357888876544444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC--CCCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e--dasr~d~~~l~~~~~~~~~~G 247 (442)
. .+.+|++.+-+..|-. ++.+.++.++-.+..++.+ ++.-+-++.+ .....+++.+.+++ + -
T Consensus 92 ~-a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~a~---~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 155 (292)
T 3daq_A 92 Q-AKALGADAIMLITPYY-------NKTNQRGLVKHFEAIADAV---KLPVVLYNVPSRTNMTIEPETVEILS----Q-H 155 (292)
T ss_dssp H-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH---CSCEEEEECHHHHSCCCCHHHHHHHH----T-S
T ss_pred H-HHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEecccccCCCCCHHHHHHHh----c-C
Confidence 3 3456999887765532 2346677666665555543 5554455543 23456777776655 3 2
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.+ +++..++. .+.+-+=+| ...+.++..|++.+ +.| .+|...+
T Consensus 156 pnivgiK~ssgd--~~~~~~----~~~~~~~~---~f~v~~G~d-----~~~~~~l~~G~~G~---is~----~~n~~P~ 214 (292)
T 3daq_A 156 PYIVALKDATND--FEYLEE----VKKRIDTN---SFALYSGND-----DNVVEYYQRGGQGV---ISV----IANVIPK 214 (292)
T ss_dssp TTEEEEEECCCC--HHHHHH----HHTTSCTT---TSEEEESCG-----GGHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCC--HHHHHH----HHHHCCCC---CEEEEECCH-----HHHHHHHhcCCCEE---EeC----HHHhhHH
Confidence 589999999984 344444 44444420 122333333 22466788898643 322 4577777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 215 ~~~~l~~a 222 (292)
T 3daq_A 215 EFQALYDA 222 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665554
No 78
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=94.79 E-value=1.4 Score=41.04 Aligned_cols=190 Identities=14% Similarity=0.066 Sum_probs=114.7
Q ss_pred EEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc--
Q 013498 82 VFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-- 159 (442)
Q Consensus 82 I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-- 159 (442)
.+|-|+ .+-.-+.++..++.+...+.|++.+-+ +|.. ++...+.+..+ . ..+..+.+|-.
T Consensus 6 ~iDht~------L~p~~t~~~i~~l~~~a~~~~~~aVcv-~p~~-------v~~~~~~l~~~---~-v~v~~vigFP~G~ 67 (220)
T 1ub3_A 6 HIDHTL------LKPTATLEEVAKAAEEALEYGFYGLCI-PPSY-------VAWVRARYPHA---P-FRLVTVVGFPLGY 67 (220)
T ss_dssp GEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEC-CGGG-------HHHHHHHCTTC---S-SEEEEEESTTTCC
T ss_pred hcceec------cCCCCCHHHHHHHHHHHHHhCCCEEEE-CHHH-------HHHHHHHhCCC---C-ceEEEEecCCCCC
Confidence 456666 134468999999999999999999987 5543 22222332221 0 00111223311
Q ss_pred cch----hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHH
Q 013498 160 CNE----RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 160 ~~~----~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~ 235 (442)
... .+++.|++ .|.+.|.+.+..... ..-..+++++.+...++.+.+.+++ |. +|. ...+++.
T Consensus 68 ~~~~~k~~e~~~Ai~----~GAdevd~vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lk-vI--let-~~l~~e~ 134 (220)
T 1ub3_A 68 QEKEVKALEAALACA----RGADEVDMVLHLGRA-----KAGDLDYLEAEVRAVREAVPQAVLK-VI--LET-GYFSPEE 134 (220)
T ss_dssp SCHHHHHHHHHHHHH----TTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHSTTSEEE-EE--CCG-GGSCHHH
T ss_pred CchHHHHHHHHHHHH----cCCCEEEecccchhh-----hCCCHHHHHHHHHHHHHHHcCCCce-EE--Eec-CCCCHHH
Confidence 111 23334443 599999988765432 1235677888888888877654432 33 333 3356788
Q ss_pred HHHHHHHHHHcCCcEEeccC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEee--cCCcchHHHHHHHHHHhCCCEEE
Q 013498 236 LYEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHC--QNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laD--T~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~--HNDlGLA~ANalaAl~aGa~~vd 311 (442)
+...++.+.++|||.|--.- +.|-++|+++..+-+.+... ++|-.=. + + ...+++-+++||++|=
T Consensus 135 i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~------v~VkaaGGir-t----~~~al~~i~aGa~RiG 203 (220)
T 1ub3_A 135 IARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGR------AQVKAAGGIR-D----RETALRMLKAGASRLG 203 (220)
T ss_dssp HHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTS------SEEEEESSCC-S----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCC------CeEEEECCCC-C----HHHHHHHHHCCCcccc
Confidence 99999999999999987763 24667898887765544211 3332222 2 2 2567777789999764
Q ss_pred ec
Q 013498 312 VT 313 (442)
Q Consensus 312 ~T 313 (442)
+|
T Consensus 204 ~S 205 (220)
T 1ub3_A 204 TS 205 (220)
T ss_dssp ET
T ss_pred hh
Confidence 43
No 79
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.78 E-value=3.2 Score=40.24 Aligned_cols=194 Identities=12% Similarity=0.100 Sum_probs=117.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 93 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQ-------RRVPVVAGVASTSVADAVAQAK 93 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCBEEEEEESSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 478888999999999999998754 3 355566664 45566555543 3357788877655444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC--CCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas--r~d~~~l~~~~~~~~~~G 247 (442)
. ...+|++.+-+..|-. ++.+.++.++-....++. .++.-+-++.+..+ ..+++.+.+++ +.
T Consensus 94 ~-a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 157 (300)
T 3eb2_A 94 L-YEKLGADGILAILEAY-------FPLKDAQIESYFRAIADA---VEIPVVIYTNPQFQRSDLTLDVIARLA----EH- 157 (300)
T ss_dssp H-HHHHTCSEEEEEECCS-------SCCCHHHHHHHHHHHHHH---CSSCEEEEECTTTCSSCCCHHHHHHHH----TS-
T ss_pred H-HHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHH---CCCCEEEEECccccCCCCCHHHHHHHH----cC-
Confidence 3 3456999887766542 245767766655554443 35654556654333 34566665553 33
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++.....+ . -+-+.+++ .+.++..|++.+ +. ..+|...+
T Consensus 158 pnIvgiKdssgd--~~~~~~~~~~~~~~f------~-v~~G~d~~------~~~~l~~G~~G~---is----~~an~~P~ 215 (300)
T 3eb2_A 158 PRIRYIKDASTN--TGRLLSIINRCGDAL------Q-VFSASAHI------PAAVMLIGGVGW---MA----GPACIAPR 215 (300)
T ss_dssp TTEEEEEECSSB--HHHHHHHHHHHGGGS------E-EEECTTSC------HHHHHHTTCCEE---EE----GGGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHHHcCCCe------E-EEeCcHHH------HHHHHhCCCCEE---Ee----ChhhhhHH
Confidence 578999999884 456666666543322 1 23344432 356778897653 22 24577677
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 216 ~~~~l~~a 223 (300)
T 3eb2_A 216 QSVALYEL 223 (300)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665553
No 80
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=94.76 E-value=0.8 Score=42.52 Aligned_cols=215 Identities=14% Similarity=0.107 Sum_probs=113.5
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee--
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-- 156 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~-- 156 (442)
++-+.-.|+|. .++.++. ++.+.++|++.||+..+...+.+.+.++.+.+..+-.+ ..+..
T Consensus 6 ~lg~~~~~~~~-------~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~ 68 (275)
T 3qc0_A 6 GLSINLATIRE-------QCGFAEA---VDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKL-------TGLCRGG 68 (275)
T ss_dssp TEEEEGGGGTT-------TCCHHHH---HHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEE-------SCEEEEE
T ss_pred cceeeeeeccC-------CCCHHHH---HHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCce-------EEeecCC
Confidence 35555556643 2455554 55667889999999653222334555665555433221 11221
Q ss_pred -ecccc-------hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCeEEEc
Q 013498 157 -LSRCN-------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFS 224 (442)
Q Consensus 157 -~~r~~-------~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~G~~~V~f~ 224 (442)
+...+ .+.++++++.....|.+.|.+.....+. -..+ .+...+.+.+++++|++.|+. +.+-
T Consensus 69 ~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE 142 (275)
T 3qc0_A 69 FFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPG-----GSKNIDAARRMVVEGIAAVLPHARAAGVP-LAIE 142 (275)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCT-----TCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEC
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCC-----CCcCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEe
Confidence 11112 1345666777777899988876432110 0112 345567777888899999985 6654
Q ss_pred cCC-------CCCCCHHHHHHHHHHHHHcCCcEEec-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 225 PED-------AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 225 ~ed-------asr~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
... ..-.+++.+.++++.+-. .+.+ -|+.=...-....+.++.+... + -...+|.+|...-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~vg~~~D~~h~~~~~d~~~~l~~~~~~--~---~i~~vH~~D~~~~-- 211 (275)
T 3qc0_A 143 PLHPMYAADRACVNTLGQALDICETLGP----GVGVAIDVYHVWWDPDLANQIARAGKM--K---AILAHHICDWLVP-- 211 (275)
T ss_dssp CCCGGGTTTTBSCCCHHHHHHHHHHHCT----TEEEEEEHHHHTTCTTHHHHHHHHHHT--T---CEEEEEECBCCSS--
T ss_pred ECCCcccCCccccCCHHHHHHHHHHhCc----ccEEEEEhhhheeCCCHHHHHHHcCcc--c---eEEEEEecCCCCC--
Confidence 311 122467777777776632 2332 2554222212233344444310 1 2467899884211
Q ss_pred HHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhcccc
Q 013498 297 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEH 339 (442)
Q Consensus 297 ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~ 339 (442)
.+ +.+. .-.-+| .|..+..+++..|+..|.+
T Consensus 212 --------~~-~~~~-~r~~~G--~G~id~~~~~~~L~~~gy~ 242 (275)
T 3qc0_A 212 --------TK-DMLT-DRGMMG--DGVIDLKGIRRRIEAAGFH 242 (275)
T ss_dssp --------CC-CSSS-BCBCTT--SSCCCHHHHHHHHHHTTCC
T ss_pred --------cc-cccC-CCcCCC--CCccCHHHHHHHHHHcCCC
Confidence 00 0000 001234 4889999999999987643
No 81
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=94.75 E-value=1.2 Score=42.42 Aligned_cols=175 Identities=13% Similarity=0.061 Sum_probs=106.5
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee---e-cc----cchhhHHHHHH
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG---L-SR----CNERDIKTAWE 170 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~---~-~r----~~~~dI~~a~e 170 (442)
+.++..++.+...+.|++.+-+- | .- ++... .... .+...++. + .+ .....++.+++
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~-~----~~---v~~~~--~~~~-----~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~ 103 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ-R----GI---AEKYY--DGSV-----PLILKLNGKTTLYNGEPVSVANCSVEEAVS 103 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC-H----HH---HHHHC--CSSS-----CEEEECEECCTTCCSSCCCEESSCHHHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEEC-H----HH---HHHhh--cCCC-----cEEEEEeCCCCcCCCCccchHHHHHHHHHH
Confidence 57778899999999999999872 2 11 22222 1111 11111111 1 10 11234666665
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-CCCCC----CCHHHHHHHHHHHHH
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDAGR----SDRKFLYEILGEVIK 245 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~-edasr----~d~~~l~~~~~~~~~ 245 (442)
.|.+.|.+.+-.. ..+.++.++.+.+.++.+++.|+. +.+.+ .+... .+++.+.+.++.+.+
T Consensus 104 ----~Ga~~v~~~~nig--------~~~~~~~~~~~~~v~~~~~~~~~~-vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~ 170 (263)
T 1w8s_A 104 ----LGASAVGYTIYPG--------SGFEWKMFEELARIKRDAVKFDLP-LVVESFPRGGKVVNETAPEIVAYAARIALE 170 (263)
T ss_dssp ----TTCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHHHTCC-EEEEECCCSTTCCCTTCHHHHHHHHHHHHH
T ss_pred ----CCCCEEEEEEecC--------CcCHHHHHHHHHHHHHHHHHcCCe-EEEEeeCCCCccccCCCHHHHHHHHHHHHH
Confidence 4889887655221 134567889999999999999986 43332 11111 167888888899999
Q ss_pred cCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEe-ecC--CcchHHHHHHHHHHhCCCEEE
Q 013498 246 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTH-CQN--DLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 246 ~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H-~HN--DlGLA~ANalaAl~aGa~~vd 311 (442)
+|||.|... +.| .|+.++++ ++..+. +++-.= .=+ +.--+++|.-.++++||+.+.
T Consensus 171 ~GAD~vkt~-~~~--~~e~~~~~----~~~~~~---~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvs 229 (263)
T 1w8s_A 171 LGADAMKIK-YTG--DPKTFSWA----VKVAGK---VPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIA 229 (263)
T ss_dssp HTCSEEEEE-CCS--SHHHHHHH----HHHTTT---SCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEEc-CCC--CHHHHHHH----HHhCCC---CeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 999998888 433 55555554 444331 122221 223 788889999999999998543
No 82
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=94.68 E-value=1.3 Score=43.61 Aligned_cols=165 Identities=18% Similarity=0.263 Sum_probs=86.2
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCCh----hHHHHHHHHHHHhcccccccCCcc
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAASK----EDFEAVRTIAKEVGNAVDAESGYV 151 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~~----~d~e~v~~l~~~~~~~~~~~~~l~ 151 (442)
.-|+-+|. |-..--|..++.+..++.++.+.+.|-++|.+|. |++.+ +|++.+.-+.+.+.... . +
T Consensus 13 MGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~----~-v 86 (314)
T 2vef_A 13 CGIINVTP-DSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES----D-V 86 (314)
T ss_dssp EEEEECCC----------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC----C-C
T ss_pred EEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC----C-c
Confidence 44666665 4433334557899999999999999999999997 44321 34443333322221100 1 1
Q ss_pred ceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC---
Q 013498 152 PVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA--- 228 (442)
Q Consensus 152 ~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda--- 228 (442)
| |+ .--.+.+-++.|+++ |.+.|+ .+|- +... + ++.+.+++.|+. |.+...+.
T Consensus 87 p-iS-IDT~~~~Va~aAl~a----Ga~iIN---DVsg------~~~d-~-------~m~~v~a~~~~~-vvlmh~~~~g~ 142 (314)
T 2vef_A 87 L-IS-IDTWKSQVAEAALAA----GADLVN---DITG------LMGD-E-------KMPHVVAEARAQ-VVIMFNPVMAR 142 (314)
T ss_dssp E-EE-EECSCHHHHHHHHHT----TCCEEE---ETTT------TCSC-T-------THHHHHHHHTCE-EEEECCHHHHC
T ss_pred e-EE-EeCCCHHHHHHHHHc----CCCEEE---ECCC------CCCC-h-------HHHHHHHHcCCC-EEEEecCCCCC
Confidence 1 22 122355666667664 877765 3331 1111 1 345556778875 44432110
Q ss_pred CCC-----------------------------C--HHHHHHHHHHHHHcCC--cEEeccCc-ccc-cCHHHHHHHHHHHH
Q 013498 229 GRS-----------------------------D--RKFLYEILGEVIKVGA--TTLNIPDT-VGI-TMPTEFGKLIADIK 273 (442)
Q Consensus 229 sr~-----------------------------d--~~~l~~~~~~~~~~Ga--d~I~laDT-~G~-~~P~~v~~li~~l~ 273 (442)
.++ + .+++.+.++.+.++|+ +.|.| |. +|. -+.++-.++++.++
T Consensus 143 p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Iil-DPGiGF~kt~~~nl~ll~~l~ 221 (314)
T 2vef_A 143 PQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILL-DPGIGFGLTKKENLLLLRDLD 221 (314)
T ss_dssp TTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHH
T ss_pred CCCcccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccchHHHHHHHHHHH
Confidence 000 0 2446667778888998 34554 64 343 34556677777776
Q ss_pred Hh
Q 013498 274 AN 275 (442)
Q Consensus 274 ~~ 275 (442)
+.
T Consensus 222 ~l 223 (314)
T 2vef_A 222 KL 223 (314)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 83
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=94.63 E-value=0.33 Score=46.78 Aligned_cols=169 Identities=19% Similarity=0.217 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChh----------------------HHHHHHHHHHHhcccccccCCccceEee
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKE----------------------DFEAVRTIAKEVGNAVDAESGYVPVICG 156 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~----------------------d~e~v~~l~~~~~~~~~~~~~l~~~i~~ 156 (442)
+.+.-+++++.|.+. +|.||+|.|.+.|- -++.++++.+.. + .|.+ .
T Consensus 28 ~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~-~--------~Pii-~ 96 (271)
T 1ujp_A 28 SREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT-E--------KPLF-L 96 (271)
T ss_dssp CHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-C--------SCEE-E
T ss_pred ChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-C--------CCEE-E
Confidence 345678899999999 99999999976541 134455554431 1 2322 2
Q ss_pred ecccch---hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCH
Q 013498 157 LSRCNE---RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDR 233 (442)
Q Consensus 157 ~~r~~~---~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~ 233 (442)
+.-.+. -.++..++....+|++.+-+.... . +.+.+.++.++++|+..+.+.. .-++.
T Consensus 97 m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~------------~----ee~~~~~~~~~~~gl~~i~lia---p~s~~ 157 (271)
T 1ujp_A 97 MTYLNPVLAWGPERFFGLFKQAGATGVILPDLP------------P----DEDPGLVRLAQEIGLETVFLLA---PTSTD 157 (271)
T ss_dssp ECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCC------------G----GGCHHHHHHHHHHTCEEECEEC---TTCCH
T ss_pred EecCcHHHHhhHHHHHHHHHHcCCCEEEecCCC------------H----HHHHHHHHHHHHcCCceEEEeC---CCCCH
Confidence 222221 133444454555688865543211 1 3455677888999985333221 22445
Q ss_pred HHHHHHHHHHHHcCCcEEecc---CcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 013498 234 KFLYEILGEVIKVGATTLNIP---DTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~la---DT~G~~~--P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~ 308 (442)
+.+.++++ .+...+|+. =++|.-. +....++++.+++.. +. .+.+++-.|+ ......+ +||+
T Consensus 158 eri~~ia~----~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~-Pv~vGfGI~t------~e~a~~~-~~AD 224 (271)
T 1ujp_A 158 ARIATVVR----HATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-AL-PVAVGFGVSG------KATAAQA-AVAD 224 (271)
T ss_dssp HHHHHHHT----TCCSCEEEECC------------CCHHHHHHHHTTC-CS-CEEEESCCCS------HHHHHHH-TTSS
T ss_pred HHHHHHHH----hCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CC-CEEEEcCCCC------HHHHHHh-cCCC
Confidence 54444443 333334332 2344433 234468899999875 32 2556644443 3333445 8887
Q ss_pred EE
Q 013498 309 QV 310 (442)
Q Consensus 309 ~v 310 (442)
.|
T Consensus 225 gV 226 (271)
T 1ujp_A 225 GV 226 (271)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 84
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=94.57 E-value=1.1 Score=41.44 Aligned_cols=191 Identities=15% Similarity=0.091 Sum_probs=101.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee----ec------ccc------
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----LS------RCN------ 161 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~----~~------r~~------ 161 (442)
.+.++.+ +.+.++|++.||+..|. +.+.+.++.+.+..+-.+ ..+.. |. -.+
T Consensus 15 ~~~~~~l---~~~~~~G~~~vEl~~~~--~~~~~~~~~~l~~~gl~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~ 82 (260)
T 1k77_A 15 VPFIERF---AAARKAGFDAVEFLFPY--NYSTLQIQKQLEQNHLTL-------ALFNTAPGDINAGEWGLSALPGREHE 82 (260)
T ss_dssp SCGGGHH---HHHHHHTCSEEECSCCT--TSCHHHHHHHHHHTTCEE-------EEEECCCCCGGGTCSCSTTCTTCHHH
T ss_pred CCHHHHH---HHHHHhCCCEEEecCCC--CCCHHHHHHHHHHcCCce-------EEEecCCcccccccCCCCCChhHHHH
Confidence 3444444 55667799999998763 234555666555432211 11111 10 001
Q ss_pred -hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCH----HHHHHHHHHHHHHHHHcCCCeEEEccCC------CCC
Q 013498 162 -ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTK----QQVVEIARSMVKFARSLGCDDVEFSPED------AGR 230 (442)
Q Consensus 162 -~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~----~e~l~~~~~~v~~ar~~G~~~V~f~~ed------asr 230 (442)
.+.++++++.....|.+.|.+.....+ -+.+. +...+.+.+++++|++.|+. +.+-... ..-
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~ 155 (260)
T 1k77_A 83 AHADIDLALEYALALNCEQVHVMAGVVP------AGEDAERYRAVFIDNIRYAADRFAPHGKR-ILVEALSPGVKPHYLF 155 (260)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECCCCBCC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCE-EEECCCCTTTSTTBSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEeCCccCCCcCcc
Confidence 234566677777789998876433211 01233 34556667778888888873 5553321 112
Q ss_pred CCHHHHHHHHHHHHHcCCcEEec-cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 013498 231 SDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~ 309 (442)
.+++.+.++++.+ +.+.+.+ -||.=.. -.. .+....+++..+ -...+|.||..| +
T Consensus 156 ~~~~~~~~l~~~~---~~~~~g~~~D~~h~~-~~~-~d~~~~l~~~~~----~i~~vH~~D~~~--------------r- 211 (260)
T 1k77_A 156 SSQYQALAIVEEV---ARDNVFIQLDTFHAQ-KVD-GNLTHLIRDYAG----KYAHVQIAGLPD--------------R- 211 (260)
T ss_dssp CSHHHHHHHHHHH---CCTTEEEEEEHHHHH-HHT-CCHHHHHHHTTT----SEEEEEECCTTT--------------C-
T ss_pred CCHHHHHHHHHHh---CCCCEEEEeeHHHHH-hhC-CCHHHHHHHhhh----heeEEEECCCCC--------------C-
Confidence 4566666666554 4333333 2553111 000 122233443322 356889888643 1
Q ss_pred EEecccccccccCcccHHHHHHHHHhccc
Q 013498 310 VEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 310 vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
.-+| .|..+.++++..|+..|.
T Consensus 212 -----~~~G--~G~id~~~~~~~L~~~gy 233 (260)
T 1k77_A 212 -----HEPD--DGEINYPWLFRLFDEVGY 233 (260)
T ss_dssp -----CCSS--SSSSCHHHHHHHHHHTTC
T ss_pred -----CCCC--CCccCHHHHHHHHHHcCC
Confidence 2234 488999999999998753
No 85
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=94.55 E-value=2.1 Score=40.24 Aligned_cols=192 Identities=18% Similarity=0.136 Sum_probs=101.7
Q ss_pred HHHHHHHhHcCCCEEEEc---cCCCChhHHHHHHHHHHHhcccccccCCccceEee------ecccch-------hhHHH
Q 013498 104 LDIARQLAKLGVDIIEAG---FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG------LSRCNE-------RDIKT 167 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG---~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~------~~r~~~-------~dI~~ 167 (442)
.+.++.+.++|++.||+. +|..++.+.+.++.+.+..+-.+ ..+.+ ++..+. +.+++
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i-------~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 92 (294)
T 3vni_A 20 KYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITL-------TVGHGPSAEQNLSSPDPDIRKNAKAFYTD 92 (294)
T ss_dssp HHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEE-------EEEECCCGGGCTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeE-------EEeecCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 344556677799999997 34445666677776666533211 01011 111111 23455
Q ss_pred HHHHHHhCCCCEEEEee-cCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCeEEEccCCC----CCCCHHHHHH
Q 013498 168 AWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFSPEDA----GRSDRKFLYE 238 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~-~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~G~~~V~f~~eda----sr~d~~~l~~ 238 (442)
+++.....|.+.|.+.+ +..... ..-+.+ .+...+.+.+++++|++.|+. +.+-.... .-.+++.+.+
T Consensus 93 ~i~~a~~lG~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~ 169 (294)
T 3vni_A 93 LLKRLYKLDVHLIGGALYSYWPID--YTKTIDKKGDWERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVD 169 (294)
T ss_dssp HHHHHHHHTCCEEEESTTSCSSCC--TTSCCCHHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHH
T ss_pred HHHHHHHhCCCeeeccccCCCCCc--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHH
Confidence 56666667888886422 111000 000122 345566677888889999974 55533211 1236677777
Q ss_pred HHHHHHHcCCcEEecc-CcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccc
Q 013498 239 ILGEVIKVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTING 316 (442)
Q Consensus 239 ~~~~~~~~Gad~I~la-DT~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~G 316 (442)
+++.+ +.+.+.++ ||.=...- ....+.++.+.. -...+|.+|... ...
T Consensus 170 l~~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~r-------------------~~p- 219 (294)
T 3vni_A 170 FVKQV---DHNNVKVMLDTFHMNIEEDSIGGAIRTAGS-------YLGHLHTGECNR-------------------KVP- 219 (294)
T ss_dssp HHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEECCTTS-------------------CCT-
T ss_pred HHHHc---CCCCEEEEEEhhhhHHcCCCHHHHHHHhhh-------hEeEEEeCCCCC-------------------CCC-
Confidence 77655 43333333 55311110 122333333322 346799998521 122
Q ss_pred cccccCcccHHHHHHHHHhccc
Q 013498 317 IGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 317 lGeraGNa~lEevv~~L~~~g~ 338 (442)
+.|..+.++++..|+..|.
T Consensus 220 ---G~G~id~~~~~~~L~~~gy 238 (294)
T 3vni_A 220 ---GRGRIPWVEIGEALADIGY 238 (294)
T ss_dssp ---TSSSCCHHHHHHHHHHTTC
T ss_pred ---CCCCcCHHHHHHHHHHhCC
Confidence 3588999999999998753
No 86
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=94.55 E-value=0.44 Score=44.68 Aligned_cols=162 Identities=21% Similarity=0.185 Sum_probs=113.6
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhccc-cccc---CCc--------cceEeeecccc----
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNA-VDAE---SGY--------VPVICGLSRCN---- 161 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~-~~~~---~~l--------~~~i~~~~r~~---- 161 (442)
-+.|+-++-.+...+.....+-+|-.+-.|..|..+-.++.+.... +.+- .++ -..+.++.+..
T Consensus 48 ~tve~av~~mk~y~~~~~~avSVGLGaGDp~Q~~~Va~Ia~~~~P~HVNQvFtgag~t~~~L~~~~T~VNaLvsPTG~~G 127 (249)
T 3m0z_A 48 PDVASAVVDMRDYAKLIDNALSVGLGAGDPNQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQNETVVNGLVSPTGTPG 127 (249)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEECSSSCGGGHHHHHHHHHHHCCSEECCBGGGHHHHHHHHTSSCSEEEEEEBCCSSTT
T ss_pred CCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHHhccCCCeEEEEEEcCCCccc
Confidence 4678888888888888887899988777888999888888764321 1100 000 01222221110
Q ss_pred ----------------hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 162 ----------------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 162 ----------------~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.-.++.|+..++..|.+.|.+| |.-- . ..+++++.+++.|.+.|+ . +
T Consensus 128 ~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKff-Pm~G--------l---~~l~E~~avAka~a~~g~---~--l 190 (249)
T 3m0z_A 128 MVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYF-PMGG--------L---KHRAEFEAVAKACAAHDF---W--L 190 (249)
T ss_dssp EEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEEC-CCTT--------T---TTHHHHHHHHHHHHHTTC---E--E
T ss_pred eEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEe-ecCC--------c---ccHHHHHHHHHHHHHcCc---e--E
Confidence 1247889999999999999876 3321 1 224566777888888886 2 3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEe------ccC-cccccCHHHHHHHHHHHHHhC
Q 013498 226 EDAGRSDRKFLYEILGEVIKVGATTLN------IPD-TVGITMPTEFGKLIADIKANT 276 (442)
Q Consensus 226 edasr~d~~~l~~~~~~~~~~Gad~I~------laD-T~G~~~P~~v~~li~~l~~~~ 276 (442)
|-++-.|.+.+.++++.+.++|+..|. +-| ..|...|+++++|+..+++.+
T Consensus 191 EPTGGIdl~N~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 191 EPTGGIDLENYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp EEBSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred CCCCCccHhhHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 447788889999999999999987542 333 569999999999999998764
No 87
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.49 E-value=1.1 Score=45.25 Aligned_cols=98 Identities=20% Similarity=0.251 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccC-cccccCHHHHHHH--HHHHHHhCCCCcceeE
Q 013498 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD-TVGITMPTEFGKL--IADIKANTPGIENVVI 284 (442)
Q Consensus 208 ~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laD-T~G~~~P~~v~~l--i~~l~~~~p~~~~v~i 284 (442)
++++++.+.|.+ |-++- +-++.+++...++.+.+.|.+.|.|+- +.++=+|.+..+| |..|++.+|+ ++|
T Consensus 149 pLL~~va~~gKP-ViLSt---GmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~---lpV 221 (385)
T 1vli_A 149 PLLKYVARLNRP-MIFST---AGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPE---AVI 221 (385)
T ss_dssp HHHHHHHTTCSC-EEEEC---TTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTT---SEE
T ss_pred HHHHHHHhcCCe-EEEEC---CCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCC---CCE
Confidence 456667778876 76653 335889999999999999986666643 3344445555444 7888998863 678
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 285 STHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 285 ~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
++=-|- .|- .+-+++|+.+||+.|+.=+
T Consensus 222 G~SdHt-~G~-~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 222 GFSDHS-EHP-TEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp EEEECC-SSS-SHHHHHHHHTTCSEEEEEB
T ss_pred EeCCCC-CCc-hHHHHHHHHcCCCEEEeCC
Confidence 886665 342 6778999999999986644
No 88
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=94.37 E-value=2.4 Score=40.14 Aligned_cols=197 Identities=13% Similarity=0.072 Sum_probs=120.4
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee--
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL-- 157 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~-- 157 (442)
-..+|-|+ .+-.-+.++..++.+...+.|+..+-+ +|...+ ...+.+..+ . ..+..+.+|
T Consensus 28 ~~~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV-~p~~v~-------~a~~~L~~s---~-v~v~tVigFP~ 89 (239)
T 3ngj_A 28 AKYIDHTL------LKADATEEQIRKLCSEAAEYKFASVCV-NPTWVP-------LCAELLKGT---G-VKVCTVIGFPL 89 (239)
T ss_dssp HTTEEEEE------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGGGHH-------HHHHHHTTS---S-CEEEEEESTTT
T ss_pred HhhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEE-CHHHHH-------HHHHHhCCC---C-CeEEEEeccCC
Confidence 34678887 233578999999999999999999998 664432 223332221 0 112233344
Q ss_pred cccc-hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHH
Q 013498 158 SRCN-ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFL 236 (442)
Q Consensus 158 ~r~~-~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l 236 (442)
+... ..-+..+-+++. .|.+.|.+.+....+ ..-..+.+.+.+...++.+.+. .+-+-.|. +..+.+.+
T Consensus 90 G~~~~~~Kv~Ea~~Ai~-~GAdEIDmViNig~l-----k~g~~~~v~~eI~~v~~a~~~~---~lKVIlEt-~~Lt~eei 159 (239)
T 3ngj_A 90 GATPSEVKAYETKVAVE-QGAEEVDMVINIGMV-----KAKKYDDVEKDVKAVVDASGKA---LTKVIIEC-CYLTNEEK 159 (239)
T ss_dssp CCSCHHHHHHHHHHHHH-TTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHHTTS---EEEEECCG-GGSCHHHH
T ss_pred CCCchHHHHHHHHHHHH-cCCCEEEEEeehHHh-----ccccHHHHHHHHHHHHHHhcCC---ceEEEEec-CCCCHHHH
Confidence 2111 112223333433 499999998876532 2346777888888888877543 23443343 34678889
Q ss_pred HHHHHHHHHcCCcEEeccCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 237 YEILGEVIKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT--~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
.+.++.+.++|+|.|--.-- .|-+++++++-+-+.+...++ +...==.+ + ...+++-+++||++|=+|
T Consensus 160 ~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v~----VKasGGIr-t----~~da~~~i~aGA~riGtS 229 (239)
T 3ngj_A 160 VEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKAL----VKAAGGIR-T----FDDAMKMINNGASRIGAS 229 (239)
T ss_dssp HHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGSE----EEEESSCC-S----HHHHHHHHHTTEEEEEES
T ss_pred HHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCce----EEEeCCCC-C----HHHHHHHHHhcccceecc
Confidence 99999999999999877633 466788887765544432221 22220012 1 267888899999987444
No 89
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=94.34 E-value=1.8 Score=42.23 Aligned_cols=163 Identities=18% Similarity=0.235 Sum_probs=91.0
Q ss_pred CceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCC----hhHHHHHHHHHHHhcccccccCC
Q 013498 78 NYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDAESG 149 (442)
Q Consensus 78 ~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~----~~d~e~v~~l~~~~~~~~~~~~~ 149 (442)
.-.-|+-+|. |-..--|..++.+..++.++.+.+.|-++|.+|. |.+. +++++.+..+.+.+... .
T Consensus 24 ~iMgilNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-----~ 97 (294)
T 2y5s_A 24 LVMGILNATP-DSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-----N 97 (294)
T ss_dssp EEEEEEECCC-----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-----C
T ss_pred eEEEEEeCCC-CCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-----C
Confidence 3355777776 4333224457889999999999999999999996 4322 23455444333333211 1
Q ss_pred ccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--
Q 013498 150 YVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-- 227 (442)
Q Consensus 150 l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed-- 227 (442)
+| |+ .--.+.+-++.|+++ |.+.|+ .+|- .. ..++++.+++.|+. |.+....
T Consensus 98 -vp-iS-IDT~~~~Va~aAl~a----Ga~iIN---dVsg--------~~-------d~~m~~~~a~~~~~-vVlmh~~G~ 151 (294)
T 2y5s_A 98 -VP-LS-IDTYKPAVMRAALAA----GADLIN---DIWG--------FR-------QPGAIDAVRDGNSG-LCAMHMLGE 151 (294)
T ss_dssp -SC-EE-EECCCHHHHHHHHHH----TCSEEE---ETTT--------TC-------STTHHHHHSSSSCE-EEEECCCEE
T ss_pred -Ce-EE-EECCCHHHHHHHHHc----CCCEEE---ECCC--------CC-------chHHHHHHHHhCCC-EEEECCCCC
Confidence 12 22 122356667777776 777765 3432 11 11456677888985 4443321
Q ss_pred ---C----CC-CC-----HHHHHHHHHHHHHcCCc--EEeccCccccc---CH-HHHHHHHHHHHH
Q 013498 228 ---A----GR-SD-----RKFLYEILGEVIKVGAT--TLNIPDTVGIT---MP-TEFGKLIADIKA 274 (442)
Q Consensus 228 ---a----sr-~d-----~~~l~~~~~~~~~~Gad--~I~laDT~G~~---~P-~~v~~li~~l~~ 274 (442)
. .. .| .+++.+.++.+.++|++ .|.| |. |+. +. ++-.++++.+.+
T Consensus 152 p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DP-G~Gf~kt~~~~n~~ll~~l~~ 215 (294)
T 2y5s_A 152 PQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV-DP-GFGFGKAVVDDNYALLAALPD 215 (294)
T ss_dssp TTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-EC-CTTSSSCTTHHHHHHHHTGGG
T ss_pred CccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-eC-CCcccccchHHHHHHHHHHHH
Confidence 1 11 12 56888888899999986 4544 43 322 34 566667766654
No 90
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=94.29 E-value=2.7 Score=41.21 Aligned_cols=186 Identities=16% Similarity=0.111 Sum_probs=116.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCCh-hHHHHHHHHHHHhcccccccCCccceEe--eecccchhhHHHHHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVIC--GLSRCNERDIKTAWEAVK 173 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~-~d~e~v~~l~~~~~~~~~~~~~l~~~i~--~~~r~~~~dI~~a~e~l~ 173 (442)
..+.+....+++.-.+.+-+.|=-.++.... ...+.+..+....-.. -+|... .++. ..+.+..+++
T Consensus 24 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~------~VPValHlDHg~-~~e~~~~ai~--- 93 (305)
T 1rvg_A 24 VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEA------RVPVAVHLDHGS-SYESVLRALR--- 93 (305)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHC------SSCEEEEEEEEC-SHHHHHHHHH---
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHhC------CCcEEEECCCCC-CHHHHHHHHH---
Confidence 3578999999999999999977443442211 0122222222211100 134332 2332 3455555555
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--Ec----cCCC--------CCCCHHHHHHH
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FS----PEDA--------GRSDRKFLYEI 239 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~----~eda--------sr~d~~~l~~~ 239 (442)
+|...|.+ -.| ..+.+|+++..++.+++|+..|.. |+ ++ .||. ..+||+...++
T Consensus 94 -~GFtSVMi--DgS--------~~p~eENi~~Tk~vv~~ah~~gvs-VEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~F 161 (305)
T 1rvg_A 94 -AGFTSVMI--DKS--------HEDFETNVRETRRVVEAAHAVGVT-VEAELGRLAGIEEHVAVDEKDALLTNPEEARIF 161 (305)
T ss_dssp -TTCSEEEE--CCT--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCCCSCC------CCTTCCCHHHHHHH
T ss_pred -cCCCeeee--CCC--------CCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeeccCccCCccccccccccCCHHHHHHH
Confidence 48887654 333 347899999999999999999983 54 22 2432 35899988877
Q ss_pred HHHHHHcCCcEEecc--CcccccC----HHHHHHHHHHHHHhCCCCcceeEEEeecC-------------------Ccch
Q 013498 240 LGEVIKVGATTLNIP--DTVGITM----PTEFGKLIADIKANTPGIENVVISTHCQN-------------------DLGL 294 (442)
Q Consensus 240 ~~~~~~~Gad~I~la--DT~G~~~----P~~v~~li~~l~~~~p~~~~v~i~~H~HN-------------------DlGL 294 (442)
+++ .|+|.+-++ -+=|... |.--.++++.+++.+| +||.+|.=. ..|.
T Consensus 162 v~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~----vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~ 234 (305)
T 1rvg_A 162 MER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP----APLVLHGASAVPPELVERFRASGGEIGEAAGI 234 (305)
T ss_dssp HHH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC----SCEEECSCCCCCHHHHHHHHHTTCCCCSCBCC
T ss_pred HHH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC----CCEEEeCCCCCcHHHHHHHHhhccccccCCCC
Confidence 765 489865443 4446544 3334678888998885 789998855 3366
Q ss_pred HHHHHHHHHHhCCCEEE
Q 013498 295 STANTIAGACAGARQVE 311 (442)
Q Consensus 295 A~ANalaAl~aGa~~vd 311 (442)
....-..|+..|+.-|+
T Consensus 235 p~e~i~~ai~~GV~KiN 251 (305)
T 1rvg_A 235 HPEDIKKAISLGIAKIN 251 (305)
T ss_dssp CHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHCCCeEEE
Confidence 66677777777776664
No 91
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.24 E-value=4.4 Score=39.55 Aligned_cols=193 Identities=15% Similarity=0.165 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+. +.++ |+.+-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~-st~~ai~la~ 100 (314)
T 3d0c_A 29 EIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-------GRATVVAGIGY-SVDTAIELGK 100 (314)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECS-SHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-------CCCeEEecCCc-CHHHHHHHHH
Confidence 478888899999999999999876 3 455666665 45566555542 23578888877 5444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCc
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT 249 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad 249 (442)
. ...+|++.+-+..|-. ++-+.++.++-..+.++ ..+++-+-++ -... .+++.+.+++ +. ..
T Consensus 101 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn-~tg~-l~~~~~~~La----~~-pn 162 (314)
T 3d0c_A 101 S-AIDSGADCVMIHQPVH-------PYITDAGAVEYYRNIIE---ALDAPSIIYF-KDAH-LSDDVIKELA----PL-DK 162 (314)
T ss_dssp H-HHHTTCSEEEECCCCC-------SCCCHHHHHHHHHHHHH---HSSSCEEEEE-CCTT-SCTHHHHHHT----TC-TT
T ss_pred H-HHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEe-CCCC-cCHHHHHHHH----cC-CC
Confidence 3 3567999887765532 23466666665555443 3345545556 2333 6667666664 22 67
Q ss_pred EEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHH
Q 013498 250 TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEV 329 (442)
Q Consensus 250 ~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEev 329 (442)
.+.+.||.|- ..++.++++..... ++ +.+=+=+| -...+.++..|++.+ +.| .+|...+.+
T Consensus 163 IvgiKdssgd--~~~~~~~~~~~~~~-~~-----f~v~~G~d----~~~~~~~l~~G~~G~---is~----~an~~P~~~ 223 (314)
T 3d0c_A 163 LVGIKYAIND--IQRVTQVMRAVPKS-SN-----VAFICGTA----EKWAPFFYHAGAVGF---TSG----LVNVFPQKS 223 (314)
T ss_dssp EEEEEECCCC--HHHHHHHHHHSCGG-GC-----CEEEETTH----HHHHHHHHHHTCCEE---EES----GGGTCHHHH
T ss_pred EEEEEeCCCC--HHHHHHHHHhcCCC-CC-----EEEEEeCc----HHHHHHHHHcCCCEE---Eec----HHHhhHHHH
Confidence 8999999984 45555554432210 01 22222122 115677888898653 322 356666666
Q ss_pred HHHHH
Q 013498 330 VMAFK 334 (442)
Q Consensus 330 v~~L~ 334 (442)
+...+
T Consensus 224 ~~l~~ 228 (314)
T 3d0c_A 224 FALLE 228 (314)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 92
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=94.23 E-value=1.9 Score=41.97 Aligned_cols=184 Identities=18% Similarity=0.150 Sum_probs=117.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCC-----ChhH-HHHHHHHHHHhcccccccCCccceEe--eecccchhhHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAA-----SKED-FEAVRTIAKEVGNAVDAESGYVPVIC--GLSRCNERDIKTA 168 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~-----~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~--~~~r~~~~dI~~a 168 (442)
..+.+....+++.-.+.+-+.|=-.+|.. +.+. ...++.+++... .-+|+.. .++. ..+.+..+
T Consensus 28 v~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~-------~~VPValHlDHg~-~~e~i~~a 99 (288)
T 3q94_A 28 MNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMN-------ITVPVAIHLDHGS-SFEKCKEA 99 (288)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTT-------CCSCEEEEEEEEC-SHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcC-------CCCcEEEECCCCC-CHHHHHHH
Confidence 46789999999999999999764333321 2211 134444444211 1245432 3332 56677777
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--Ec----cCCC------CCCCHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FS----PEDA------GRSDRKFL 236 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~----~eda------sr~d~~~l 236 (442)
+++ |...|.+ -.| ..+.+|+++..++.+++|+..|.. |+ ++ -||. ..+||+..
T Consensus 100 i~~----GFtSVMi--DgS--------~~p~eeNi~~Tk~vv~~ah~~gvs-VEaElG~vgG~Ed~~~~~~~~yT~Peea 164 (288)
T 3q94_A 100 IDA----GFTSVMI--DAS--------HHPFEENVETTKKVVEYAHARNVS-VEAELGTVGGQEDDVIAEGVIYADPAEC 164 (288)
T ss_dssp HHH----TCSEEEE--CCT--------TSCHHHHHHHHHHHHHHHHTTTCE-EEEEESBCBCSCSSCGGGGCBCCCHHHH
T ss_pred HHc----CCCeEEE--eCC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcCCccccCCCHHHH
Confidence 775 8887654 233 247799999999999999999983 64 32 2332 47999988
Q ss_pred HHHHHHHHHcCCcEEecc--Cccccc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 237 YEILGEVIKVGATTLNIP--DTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~la--DT~G~~--~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
.++++ +.|+|.+-++ -.=|.. .|.-=.++++.+++.++ +||.+|.=. |....+-..|+..|+.-|+.
T Consensus 165 ~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~----vpLVlHGgS--G~~~e~i~~ai~~Gv~KiNi 235 (288)
T 3q94_A 165 KHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG----VPLVLHGGT--GIPTADIEKAISLGTSKINV 235 (288)
T ss_dssp HHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC----SCEEECCCT--TCCHHHHHHHHHTTEEEEEE
T ss_pred HHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC----CCEEEeCCC--CCCHHHHHHHHHcCCeEEEE
Confidence 77665 4588865543 222432 13333566777777764 678877654 77777888899988887754
No 93
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=94.22 E-value=0.15 Score=47.37 Aligned_cols=167 Identities=16% Similarity=0.110 Sum_probs=90.9
Q ss_pred HHHHHHHHHhHcCCCEEEEcc------CCCChhHHHHHHHHHHHhcccccccCCccceEeeecccch--hhHHHHHHHHH
Q 013498 102 EKLDIARQLAKLGVDIIEAGF------PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE--RDIKTAWEAVK 173 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG~------p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~--~dI~~a~e~l~ 173 (442)
+-.+.++.+.+.|++.||++. |.. ..-.+.++.+.+..+. +..+.+- .+. +.++.+.
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~-~~~~~~i~~l~~~~~~---------~~~v~l~-vnd~~~~v~~~~---- 88 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-TIGPLVVDSLRPITDL---------PLDVHLM-IVEPDQRVPDFI---- 88 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-CCCHHHHHHHGGGCCS---------CEEEEEE-SSSHHHHHHHHH----
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCccccc-ccCHHHHHHHHhccCC---------cEEEEEE-ecCHHHHHHHHH----
Confidence 456778889999999999982 432 2234666666553211 1122221 222 2344443
Q ss_pred hCCCCEEEEeec--CChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 174 YAKRPRIHTFIA--TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 174 ~~g~~~v~i~~~--~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
.+|++.|++... .++ ...+.++.+++.|+. +.+.+. ..++.+.+..+ ..++|.|
T Consensus 89 ~~Gad~v~vh~~~~~~~----------------~~~~~~~~~~~~g~~-ig~~~~--p~t~~e~~~~~-----~~~~d~v 144 (230)
T 1rpx_A 89 KAGADIVSVHCEQSSTI----------------HLHRTINQIKSLGAK-AGVVLN--PGTPLTAIEYV-----LDAVDLV 144 (230)
T ss_dssp HTTCSEEEEECSTTTCS----------------CHHHHHHHHHHTTSE-EEEEEC--TTCCGGGGTTT-----TTTCSEE
T ss_pred HcCCCEEEEEecCccch----------------hHHHHHHHHHHcCCc-EEEEeC--CCCCHHHHHHH-----HhhCCEE
Confidence 469999877654 321 123566777778874 555442 12333333222 2578866
Q ss_pred eccCcc-----cccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 252 NIPDTV-----GITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 252 ~laDT~-----G~~~P~~v~~li~~l~~~~p--~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
+ .|++ |...+....+.++.+++..+ +. ++++.+ +.|.-..|.-.++++||+.|.+.
T Consensus 145 l-~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~-~~pi~v----~GGI~~~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 145 L-IMSVNPGFGGQSFIESQVKKISDLRKICAERGL-NPWIEV----DGGVGPKNAYKVIEAGANALVAG 207 (230)
T ss_dssp E-EESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTC-CCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred E-EEEEcCCCCCccccHHHHHHHHHHHHHHHhcCC-CceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 3 4554 22223344455666665432 00 133433 34555578888899999998764
No 94
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=94.20 E-value=1.6 Score=43.14 Aligned_cols=161 Identities=16% Similarity=0.179 Sum_probs=81.9
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CC--CC-hhHHHHH----HHHHHHhccccccc
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PA--AS-KEDFEAV----RTIAKEVGNAVDAE 147 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~--~~-~~d~e~v----~~l~~~~~~~~~~~ 147 (442)
-.-|+.+|. |-..--|..++.+..++.++.+.+.|-++|.+|. |+ .+ ++|++.+ +.+.+...+
T Consensus 44 vMGIlNvTP-DSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~----- 117 (318)
T 2vp8_A 44 IMAIVNRTP-DSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPD----- 117 (318)
T ss_dssp EEEEEC---------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTT-----
T ss_pred EEEEEeCCC-CcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCC-----
Confidence 355777776 3332223456789999999999999999999995 43 22 2344433 333332101
Q ss_pred CCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC
Q 013498 148 SGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 227 (442)
Q Consensus 148 ~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed 227 (442)
+| |+ .--.+.+-++.|+++ |.+.|+ .+|- .. ..++++.+++.|+. +.+....
T Consensus 118 ---vp-IS-IDT~~~~VaeaAl~a----Ga~iIN---DVsg--------~~-------d~~m~~vaa~~g~~-vVlmh~~ 169 (318)
T 2vp8_A 118 ---QL-IS-VDTWRAQVAKAACAA----GADLIN---DTWG--------GV-------DPAMPEVAAEFGAG-LVCAHTG 169 (318)
T ss_dssp ---CE-EE-EECSCHHHHHHHHHH----TCCEEE---ETTS--------SS-------STTHHHHHHHHTCE-EEEECC-
T ss_pred ---Ce-EE-EeCCCHHHHHHHHHh----CCCEEE---ECCC--------CC-------chHHHHHHHHhCCC-EEEECCC
Confidence 11 22 222356667777776 777655 3432 11 11456667788885 4443322
Q ss_pred CC--C-----CC------------HHHHHHHHHHHHHcCCc--EEeccCc-cccc-CHHHHHHHHHHHHH
Q 013498 228 AG--R-----SD------------RKFLYEILGEVIKVGAT--TLNIPDT-VGIT-MPTEFGKLIADIKA 274 (442)
Q Consensus 228 as--r-----~d------------~~~l~~~~~~~~~~Gad--~I~laDT-~G~~-~P~~v~~li~~l~~ 274 (442)
.. + .+ .+++.+.++.+.++|++ .|.| |. +|.. +.++-.++++.+.+
T Consensus 170 G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~Iil-DPG~GF~Kt~~~nl~ll~~l~~ 238 (318)
T 2vp8_A 170 GALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLI-DPAHDFGKNTFHGLLLLRHVAD 238 (318)
T ss_dssp ------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ETTTTCCTTSHHHHHHHHTHHH
T ss_pred CCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-cCCCCcccCHHHHHHHHHHHHH
Confidence 11 1 11 16777888889999986 4544 43 2321 34555666666553
No 95
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=94.14 E-value=1.3 Score=42.35 Aligned_cols=200 Identities=13% Similarity=0.097 Sum_probs=99.2
Q ss_pred HHHHHHHhHcCCCEEEEc--cCC------CChhHHHHHHHHHHHhcccccccCCccceEeeec-------ccc-------
Q 013498 104 LDIARQLAKLGVDIIEAG--FPA------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-------RCN------- 161 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG--~p~------~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~-------r~~------- 161 (442)
.+.++.+.++|++.||+. .|. .++++.+.++.+.+..+ +. .++.++ ..+
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--------l~-~~~~h~~~~~nl~s~d~~~~r~~ 91 (303)
T 3aal_A 21 LAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHG--------IE-EIVVHAPYIINIGNTTNLDTFSL 91 (303)
T ss_dssp HHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTT--------CC-EEEEECCTTCCTTCSSCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcC--------Cc-eEEEeccccccCCCCCcHHHHHH
Confidence 344566678899999992 221 11345666666555432 10 111111 111
Q ss_pred -hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC------CCCHH
Q 013498 162 -ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG------RSDRK 234 (442)
Q Consensus 162 -~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas------r~d~~ 234 (442)
.+.++.+++.....|.+.|.+..... .+.+.++.++++.+.++.+.+.-. .|.+.+|... -.+++
T Consensus 92 ~~~~~~~~i~~A~~lGa~~vv~h~g~~-------~~~~~~~~~~~~~~~l~~l~~~a~-gv~l~lEn~~~~~~~~~~t~~ 163 (303)
T 3aal_A 92 GVDFLRAEIERTEAIGAKQLVLHPGAH-------VGAGVEAGLRQIIRGLNEVLTREQ-NVQIALETMAGKGSECGRTFE 163 (303)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCEEC-------TTSCHHHHHHHHHHHHHHHCCSSC-SCEEEEECCCCCTTEECSSHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcC-------CCCCHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCCCCCccCCCHH
Confidence 12233444544556788776543321 122566667776666665543321 1344444321 12667
Q ss_pred HHHHHHHHHHHcCCcEEecc-Ccc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 013498 235 FLYEILGEVIKVGATTLNIP-DTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~la-DT~-----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~ 308 (442)
.+.++++.+.. .+.+.++ ||. |.-......++++.+.+.++. +-...+|.|+..+- .|..
T Consensus 164 ~~~~li~~v~~--~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~--~~i~~vHl~D~~~~----------~~~~ 229 (303)
T 3aal_A 164 ELAYIIDGVAY--NDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGL--GRLKVLHINDSKNP----------RGSR 229 (303)
T ss_dssp HHHHHHHHCTT--GGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCG--GGEEEEEECEESSC----------TTCC
T ss_pred HHHHHHHhcCC--CCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCc--ccEEEEEeeCCCCc----------CCCC
Confidence 66666655421 1333333 654 321112455666666444431 13567888876541 0110
Q ss_pred EEEecccccccccCcccHHHHHHHHHhccc
Q 013498 309 QVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 309 ~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
.| .-..+|+ |+.+.+.++..|+..|.
T Consensus 230 -~d-~h~~~G~--G~id~~~~~~~L~~~gy 255 (303)
T 3aal_A 230 -KD-RHENIGF--GHIGFAALNYIVHHPQL 255 (303)
T ss_dssp -CC-CEECTTS--SSSCHHHHHHHHTCTTC
T ss_pred -Cc-CCCCCCC--CCCCHHHHHHHHhCcCc
Confidence 00 0012444 88999999999987653
No 96
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.03 E-value=1.2 Score=43.22 Aligned_cols=138 Identities=10% Similarity=0.062 Sum_probs=80.6
Q ss_pred cchhhHHHHHHHHHhCCCC---EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCCCCCCCHH
Q 013498 160 CNERDIKTAWEAVKYAKRP---RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRK 234 (442)
Q Consensus 160 ~~~~dI~~a~e~l~~~g~~---~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~edasr~d~~ 234 (442)
...++...+.+.+..+|++ .|.+.++.....-...++.+.+.. .+.++.+|+. ++. .|.+.+ + .+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~----~~ii~~vr~~~~~Pv~vK~~~-~---~~~~ 174 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAM----RTYLQQVSLAYGLPFGVKMPP-Y---FDIA 174 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHH----HHHHHHHHHHHCSCEEEEECC-C---CCHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHH----HHHHHHHHHhcCCCEEEEECC-C---CCHH
Confidence 3567777777766666777 777655322111111234454443 3444444443 443 233333 1 3678
Q ss_pred HHHHHHHHHHHcC-CcEEeccCcccc----------------------cCH---HHHHHHHHHHHHhCCCCcceeEEEee
Q 013498 235 FLYEILGEVIKVG-ATTLNIPDTVGI----------------------TMP---TEFGKLIADIKANTPGIENVVISTHC 288 (442)
Q Consensus 235 ~l~~~~~~~~~~G-ad~I~laDT~G~----------------------~~P---~~v~~li~~l~~~~p~~~~v~i~~H~ 288 (442)
.+.++++.+.++| +|.|.+.++.|. .-+ ....++++.+++.+++ ++|-.=.
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~---ipvi~~G 251 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPD---KLVFGCG 251 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTT---SEEEEES
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCC---CCEEEEC
Confidence 8889999999999 999998887631 111 1234788888888743 5555433
Q ss_pred cCCcchH-HHHHHHHHHhCCCEEEe
Q 013498 289 QNDLGLS-TANTIAGACAGARQVEV 312 (442)
Q Consensus 289 HNDlGLA-~ANalaAl~aGa~~vd~ 312 (442)
|.- -..+.+++.+||+.|-.
T Consensus 252 ----GI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 252 ----GVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp ----SCCSHHHHHHHHHHTCSSEEE
T ss_pred ----CCCCHHHHHHHHHcCCCEEEE
Confidence 322 34667777889987743
No 97
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=94.01 E-value=2.9 Score=42.26 Aligned_cols=99 Identities=16% Similarity=0.083 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHcCCcEEeccCcc---------cccCHHHHHHHHHHHHHhCCCCcceeEEE---eecCCcchHHHHHHHH
Q 013498 235 FLYEILGEVIKVGATTLNIPDTV---------GITMPTEFGKLIADIKANTPGIENVVIST---HCQNDLGLSTANTIAG 302 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~laDT~---------G~~~P~~v~~li~~l~~~~p~~~~v~i~~---H~HNDlGLA~ANalaA 302 (442)
+|.+++..+.+.|+....=+|.- -+-+++++.++++.+-.. .+.|-+ |+|..-|.-+...+..
T Consensus 201 ~L~~i~~~Aee~GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll~~vdsp-----~~gl~lDtG~l~~~~~~D~~~~i~~ 275 (386)
T 3bdk_A 201 FIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYDSE-----HNGITMCVGSYASDPKNDVLAMTEY 275 (386)
T ss_dssp HHHHHHHHHHSSSCEEEECCCSSSSCCTTCCCCCCSHHHHHHHHHTTCST-----TEEEEEEHHHHHTSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEeeCCcccccccCCceeCCHHHHHHHHHhcCCC-----CEEEEEccCchhhcCCCCHHHHHHH
Confidence 56777777777788776666521 246777777776654321 122322 3332222222333332
Q ss_pred HH--hCCCEEEec-----ccc-----cccccCcccHHHHHHHHHhccc
Q 013498 303 AC--AGARQVEVT-----ING-----IGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 303 l~--aGa~~vd~T-----v~G-----lGeraGNa~lEevv~~L~~~g~ 338 (442)
.- .=+.+|+.. ..| .|-+.|..+..+++.+|...|.
T Consensus 276 ~~~~~RI~hvHlkDv~~~~~gf~e~~~g~g~G~vD~~~i~~aL~~~gY 323 (386)
T 3bdk_A 276 ALKRNRINFMHTRNVTAGAWGFQETAHLSQAGDIDMNAVVKLLVDYDW 323 (386)
T ss_dssp HHHTTCEEEEECCCEEEETTEEEECCSSGGGSSCCHHHHHHHHHHTTC
T ss_pred hCCcCeEEEEeecCCCCCCCCccccCCCcCCCCcCHHHHHHHHHHhCC
Confidence 22 113334432 211 1223799999999999998764
No 98
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=93.93 E-value=1.2 Score=42.14 Aligned_cols=191 Identities=15% Similarity=0.104 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee----------ecccc-------hh
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG----------LSRCN-------ER 163 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~----------~~r~~-------~~ 163 (442)
..-.+.++.+.++|++.||+..+...+.+.+.++.+.+..+-.+ ..+.+ +.-.+ .+
T Consensus 41 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~p~~~~~~~l~~~d~~~r~~~~~ 113 (290)
T 2zvr_A 41 GDLRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPI-------CAIGTGQAYLADGLSLTHPNDEIRKKAIE 113 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCE-------EEEECTHHHHTTCCCTTCSSHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeE-------EEEeccCccccCCCCCCCCCHHHHHHHHH
Confidence 34456667777889999999765333455666666665433211 11211 11011 12
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC------CCCCHHHHH
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA------GRSDRKFLY 237 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda------sr~d~~~l~ 237 (442)
.++++++.....|.+.|. .+.... .-+.+.++.++++.+.++.+.+..-+ |.+..|.. .-.+++.+.
T Consensus 114 ~~~~~i~~A~~lG~~~v~--~~~~g~----~~~~~~~~~~~~~~~~l~~l~~~a~~-v~l~lEn~~~~~~~~~~~~~~~~ 186 (290)
T 2zvr_A 114 RVVKHTEVAGMFGALVII--GLVRGR----REGRSYEETEELFIESMKRLLELTEH-AKFVIEPLNRYETDFINTIDDAL 186 (290)
T ss_dssp HHHHHHHHHHHHTCEEEE--SGGGCC----CTTSCHHHHHHHHHHHHHHHHHHCSS-CCEEECCCCTTTCSSCCSHHHHH
T ss_pred HHHHHHHHHHHcCCCEEE--ecCCCC----CCCcCHHHHHHHHHHHHHHHHHHhcc-CEEEEEeCCCcCccccCCHHHHH
Confidence 345556655566877765 221100 01234555566655555555444333 44444432 123567666
Q ss_pred HHHHHHHHcCCcEEecc-CcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 238 EILGEVIKVGATTLNIP-DTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~la-DT~G~~~-P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
++++.+ +.+.+.++ |+.=... -....+.++.+.. -...+|.+|... .
T Consensus 187 ~l~~~~---~~~~vgl~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~r---------------------~ 235 (290)
T 2zvr_A 187 RILRKI---NSNRVGILADTFHMNIEEVNIPESLKRAGE-------KLYHFHVADSNR---------------------W 235 (290)
T ss_dssp HHHHHH---CCTTEEEEEEHHHHHHHCSSHHHHHHHHGG-------GEEEEEECCTTS---------------------S
T ss_pred HHHHHc---CCCCEEEEEehhHhhhcCCCHHHHHHHhhc-------cEEEEEEcCCCC---------------------C
Confidence 666655 33333332 6531110 0112233333322 346788888410 1
Q ss_pred ccccccCcccHHHHHHHHHhccc
Q 013498 316 GIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 316 GlGeraGNa~lEevv~~L~~~g~ 338 (442)
-+|+ |..+.++++..|+..|.
T Consensus 236 ~~G~--G~id~~~~~~~L~~~gy 256 (290)
T 2zvr_A 236 APGC--GHFDFRSVFNTLKEIGY 256 (290)
T ss_dssp STTS--SCCCHHHHHHHHHHTTC
T ss_pred CCCC--cccCHHHHHHHHHHcCC
Confidence 3444 88999999999998764
No 99
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.92 E-value=2.8 Score=41.33 Aligned_cols=185 Identities=13% Similarity=0.141 Sum_probs=118.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCC----ChhH-HHHHHHHHHHhcccccccCCccceEe--eecccchhhHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAA----SKED-FEAVRTIAKEVGNAVDAESGYVPVIC--GLSRCNERDIKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~--~~~r~~~~dI~~a~ 169 (442)
..+.+....+++.-.+.+-+.|=-.++.. +.+. ...++.+++.. .-+|... .++ ...+.+..++
T Consensus 25 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~--------~~VPValHlDHg-~~~e~i~~ai 95 (323)
T 2isw_A 25 VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKH--------PDIPICIHLDHG-DTLESVKMAI 95 (323)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHC--------TTSCEEEEEEEE-CSHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhc--------CCCcEEEECCCC-CCHHHHHHHH
Confidence 45789999999999999999764433321 1111 22344444320 0134332 233 2456677776
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--Ec----cCC-----CCCCCHHHHHH
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FS----PED-----AGRSDRKFLYE 238 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~----~ed-----asr~d~~~l~~ 238 (442)
++ |...|.+ -.| ..+.+|+++..++.+++|+..|.. |+ ++ .|| ...+||+...+
T Consensus 96 ~~----GFtSVMi--DgS--------~~p~eENi~~Tk~vv~~ah~~gvs-VEaELG~vgg~Ed~v~~~~~yTdPeea~~ 160 (323)
T 2isw_A 96 DL----GFSSVMI--DAS--------HHPFDENVRITKEVVAYAHARSVS-VEAELGTLGGIEEDVQNTVQLTEPQDAKK 160 (323)
T ss_dssp HT----TCSEEEE--CCT--------TSCHHHHHHHHHHHHHHHHTTTCE-EEEEESCC----------CCCCCHHHHHH
T ss_pred Hc----CCCeEEe--cCC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeCCccCCccCcccccccCCHHHHHH
Confidence 64 8887644 333 347799999999999999999983 53 22 243 34689998887
Q ss_pred HHHHHHHcCCcEEecc--CcccccC----HH--HHHHHHHHHHHhCCCCcceeEEEeec-------------------CC
Q 013498 239 ILGEVIKVGATTLNIP--DTVGITM----PT--EFGKLIADIKANTPGIENVVISTHCQ-------------------ND 291 (442)
Q Consensus 239 ~~~~~~~~Gad~I~la--DT~G~~~----P~--~v~~li~~l~~~~p~~~~v~i~~H~H-------------------ND 291 (442)
++++ .|+|.+-++ -+=|... |. --.++++.+++.++ +||.+|.= +.
T Consensus 161 Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~----vpLVlHGgSsvp~~~~~~~~~~gg~~~~~ 233 (323)
T 2isw_A 161 FVEL---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG----IPLVMHGSSSVPKDVKDMINKYGGKMPDA 233 (323)
T ss_dssp HHHH---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC----SCEEECSCCCCCHHHHHHHHHTTCCCTTC
T ss_pred HHHH---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC----CCeEEECCCCCCHHHHHHHHHhccccccC
Confidence 7764 589865444 4445543 33 22367788888773 78999983 46
Q ss_pred cchHHHHHHHHHHhCCCEEEe
Q 013498 292 LGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 292 lGLA~ANalaAl~aGa~~vd~ 312 (442)
.|.....-..|+..|+.-|+.
T Consensus 234 ~Gvp~e~i~~ai~~GV~KiNi 254 (323)
T 2isw_A 234 VGVPIESIVHAIGEGVCKINV 254 (323)
T ss_dssp BCCCHHHHHHHHHTTEEEEEE
T ss_pred CCCCHHHHHHHHHCCCeEEEE
Confidence 688888888999999887754
No 100
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=93.87 E-value=1.4 Score=42.27 Aligned_cols=164 Identities=19% Similarity=0.239 Sum_probs=93.4
Q ss_pred HHHHHHHHHhHcCCCEEEEcc-CCCChhHHHHHHHHHHHhcccccccCCccceEee-ecccchhhHHHHHHHHHhCCCCE
Q 013498 102 EKLDIARQLAKLGVDIIEAGF-PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKRPR 179 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG~-p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~e~l~~~g~~~ 179 (442)
+-.++++...+.|.+.|.+-. +.......+.++.+.+.+. .|.++. +. .+..+++.+.+ +|.+.
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~---------lPvl~kdfi-id~~qv~~A~~----~GAD~ 138 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVS---------IPVLRKDFV-VQPYQIHEARA----HGADM 138 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCS---------SCEEEESCC-CSHHHHHHHHH----TTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCC---------CCEEECccc-cCHHHHHHHHH----cCCCE
Confidence 347789999999999999832 2222234566777665431 233321 21 13335666654 59999
Q ss_pred EEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccc
Q 013498 180 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI 259 (442)
Q Consensus 180 v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~ 259 (442)
|.+-.+.-+ -+.+.+++++++++|+. +-+.. ++++++ +.+.++|++.|.+--....
T Consensus 139 VlLi~a~l~--------------~~~l~~l~~~a~~lGl~-~lvev-----~t~ee~----~~A~~~Gad~IGv~~r~l~ 194 (272)
T 3qja_A 139 LLLIVAALE--------------QSVLVSMLDRTESLGMT-ALVEV-----HTEQEA----DRALKAGAKVIGVNARDLM 194 (272)
T ss_dssp EEEEGGGSC--------------HHHHHHHHHHHHHTTCE-EEEEE-----SSHHHH----HHHHHHTCSEEEEESBCTT
T ss_pred EEEecccCC--------------HHHHHHHHHHHHHCCCc-EEEEc-----CCHHHH----HHHHHCCCCEEEECCCccc
Confidence 987544322 13456788889999985 54433 345544 3344679999888643322
Q ss_pred cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEE
Q 013498 260 TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQV 310 (442)
Q Consensus 260 ~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~v 310 (442)
..+-.+ +.+..+.+.+|. ++++-. --|.. ..+.....++||+.|
T Consensus 195 ~~~~dl-~~~~~l~~~v~~--~~pvVa----egGI~t~edv~~l~~~Gadgv 239 (272)
T 3qja_A 195 TLDVDR-DCFARIAPGLPS--SVIRIA----ESGVRGTADLLAYAGAGADAV 239 (272)
T ss_dssp TCCBCT-THHHHHGGGSCT--TSEEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred ccccCH-HHHHHHHHhCcc--cCEEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 221111 234455555552 233332 12333 466777788888876
No 101
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=93.73 E-value=5.9 Score=39.21 Aligned_cols=217 Identities=16% Similarity=0.177 Sum_probs=129.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.||+-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~ 120 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVD-------RRVPVLIGTGGTNARETIELSQ 120 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCSSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888899999999999998876 4 455566664 45565555542 2357888877555444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
.+ ..+|++.+-+..|-. ++-|.++.++-..+.++ ..++.-+-++... ....+++.+.++++ +.
T Consensus 121 ~A-~~~Gadavlv~~P~Y-------~~~s~~~l~~~f~~VA~---a~~lPiilYn~P~~tg~~l~~e~~~~La~---~~- 185 (343)
T 2v9d_A 121 HA-QQAGADGIVVINPYY-------WKVSEANLIRYFEQVAD---SVTLPVMLYNFPALTGQDLTPALVKTLAD---SR- 185 (343)
T ss_dssp HH-HHHTCSEEEEECCSS-------SCCCHHHHHHHHHHHHH---TCSSCEEEEECHHHHSSCCCHHHHHHHHH---HC-
T ss_pred HH-HhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCchhcCcCCCHHHHHHHHH---hC-
Confidence 33 456999887765532 24466666665555443 3355534555432 34567787777763 22
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++.....-++ ..| +-..+++ .+.++..|++. .+.| .+|...+
T Consensus 186 pnIvgiKdssgd--~~~~~~l~~~~~~~~~~---f~v-~~G~D~~------~l~~l~~Ga~G---~is~----~anv~P~ 246 (343)
T 2v9d_A 186 SNIIGIKDTIDS--VAHLRSMIHTVKGAHPH---FTV-LCGYDDH------LFNTLLLGGDG---AISA----SGNFAPQ 246 (343)
T ss_dssp TTEEEEEECCSC--HHHHHHHHHHHHHHCTT---CEE-EESSGGG------HHHHHHTTCCE---ECCG----GGTTCHH
T ss_pred CCEEEEEeCCCC--HHHHHHHHHhcCCCCCC---EEE-EECcHHH------HHHHHHCCCCE---EEeC----HHHhHHH
Confidence 679999999985 45677777665421122 222 3344332 45677788763 3433 4677777
Q ss_pred HHHHHHHhccccccCCccCCCChhHHHHHHHHHHHH
Q 013498 328 EVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEY 363 (442)
Q Consensus 328 evv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~ 363 (442)
.++...+... . =|++.-.++-+.+..+
T Consensus 247 ~~~~l~~a~~--------~-Gd~~~A~~l~~~l~~l 273 (343)
T 2v9d_A 247 VSVNLLKAWR--------D-GDVAKAAGYHQTLLQI 273 (343)
T ss_dssp HHHHHHHHHH--------T-TCHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHH--------C-CCHHHHHHHHHHHHHH
Confidence 7766555321 1 1555555555555544
No 102
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.73 E-value=2.6 Score=42.10 Aligned_cols=143 Identities=22% Similarity=0.205 Sum_probs=86.6
Q ss_pred CCCCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccce
Q 013498 74 IPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPV 153 (442)
Q Consensus 74 ~~~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~ 153 (442)
+.....|.+.-.|-=| ..+.+.-++=+..|.++|.+.|.++.| .+++.++++.|.+.....+-.|-.+-+.
T Consensus 26 IGG~~Pi~VQSMtnt~-------T~D~~atv~Qi~~l~~aG~diVRvavp--~~~~a~al~~I~~~~~vPlvaDiHf~~~ 96 (366)
T 3noy_A 26 IGGDAPIVVQSMTSTK-------THDVEATLNQIKRLYEAGCEIVRVAVP--HKEDVEALEEIVKKSPMPVIADIHFAPS 96 (366)
T ss_dssp ESTTSCCEEEEECCSC-------TTCHHHHHHHHHHHHHTTCCEEEEECC--SHHHHHHHHHHHHHCSSCEEEECCSCHH
T ss_pred EcCCCcEEEEEecCCC-------CcCHHHHHHHHHHHHHcCCCEEEeCCC--ChHHHHHHHHHHhcCCCCEEEeCCCCHH
Confidence 3344456666665322 367788888889999999999999998 3667888998888642111001000000
Q ss_pred E--------eeecccchhhH------HHHHHHHHhCCCC-EEEEeecCChHHHHHHhC-CCHHHHHHHHHHHHHHHHHcC
Q 013498 154 I--------CGLSRCNERDI------KTAWEAVKYAKRP-RIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLG 217 (442)
Q Consensus 154 i--------~~~~r~~~~dI------~~a~e~l~~~g~~-~v~i~~~~Sd~h~~~~l~-~s~~e~l~~~~~~v~~ar~~G 217 (442)
+ +..-|.|+-.| +..+++.++.+++ ||.+--..-+-++..+++ -+++..++-+.+.++.+.++|
T Consensus 97 lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 97 YAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp HHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 0 00123333322 3444555555665 455444444456666676 577778888888888888888
Q ss_pred CCeEEEcc
Q 013498 218 CDDVEFSP 225 (442)
Q Consensus 218 ~~~V~f~~ 225 (442)
+..+.+++
T Consensus 177 f~~iviS~ 184 (366)
T 3noy_A 177 FTNYKVSI 184 (366)
T ss_dssp CCCEEEEE
T ss_pred CCeEEEee
Confidence 86666665
No 103
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=93.72 E-value=4.4 Score=38.99 Aligned_cols=168 Identities=12% Similarity=0.174 Sum_probs=91.0
Q ss_pred CCCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCCC----hhHHHHHHHHHHHhcccccc
Q 013498 75 PDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAAS----KEDFEAVRTIAKEVGNAVDA 146 (442)
Q Consensus 75 ~~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~~----~~d~e~v~~l~~~~~~~~~~ 146 (442)
+.|+=.-|+-+|. |-..--|..++.+..++-++.|.+.|.++|++|- |++. ++|++.+.-+.+.+...
T Consensus 5 ~r~~iMGIlNvTP-DSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~--- 80 (270)
T 4hb7_A 5 TKTKIMGILNVTP-DSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGF--- 80 (270)
T ss_dssp CCCEEEEEEECC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTS---
T ss_pred CCCeEEEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcC---
Confidence 3444455777775 4443334567889999999999999999999984 4332 23555554444443210
Q ss_pred cCCccceEeeecccchhhHHHHHHHHHhCCCCEEEEee-cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 147 ESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 147 ~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~-~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
. ..|+.=+ .+.+-++.|+++ |++.|+-.. ...| .++++.+.+.|+. +++..
T Consensus 81 --~--v~iSIDT-~~~~Va~~al~a----Ga~iINDVs~g~~d------------------~~m~~~va~~~~~-~vlMH 132 (270)
T 4hb7_A 81 --D--VKISVDT-FRSEVAEACLKL----GVDMINDQWAGLYD------------------HRMFQIVAKYDAE-IILMH 132 (270)
T ss_dssp --S--SEEEEEC-SCHHHHHHHHHH----TCCEEEETTTTSSC------------------THHHHHHHHTTCE-EEEEC
T ss_pred --C--CeEEEEC-CCHHHHHHHHHh----ccceeccccccccc------------------hhHHHHHHHcCCC-eEEec
Confidence 1 1122212 244555667765 888776321 1111 1345666778875 44432
Q ss_pred C-CCCCCC------HHHHHHHHHHHHHcCCc--EEeccCccccc-CHHHHHHHHHHHHH
Q 013498 226 E-DAGRSD------RKFLYEILGEVIKVGAT--TLNIPDTVGIT-MPTEFGKLIADIKA 274 (442)
Q Consensus 226 e-dasr~d------~~~l~~~~~~~~~~Gad--~I~laDT~G~~-~P~~v~~li~~l~~ 274 (442)
+ ...+.+ .+|+.+-++.+.++|++ .|.|==-.|.. ++++=.++++.+.+
T Consensus 133 ~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~ 191 (270)
T 4hb7_A 133 NGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDE 191 (270)
T ss_dssp CCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHH
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHH
Confidence 2 222222 24666677788889984 45553344544 45666777766654
No 104
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=93.62 E-value=0.88 Score=44.27 Aligned_cols=149 Identities=15% Similarity=0.127 Sum_probs=93.8
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE--EEccCCCCCCCHHHHHH
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV--EFSPEDAGRSDRKFLYE 238 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V--~f~~edasr~d~~~l~~ 238 (442)
..+||+...+..+..|+..|.++ |. + +..+ .+..+..+.. | .++++. +..+.+--..
T Consensus 72 T~~dI~~lc~eA~~~g~aaVCV~-P~---~------------V~~a---~~~L~~s~V~-V~tVigFP~-G~~~~~~Kv~ 130 (288)
T 3oa3_A 72 TGSQIDVLCAEAKEYGFATVCVR-PD---Y------------VSRA---VQYLQGTQVG-VTCVIGFHE-GTYSTDQKVS 130 (288)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEC-GG---G------------HHHH---HHHTTTSSCE-EEEEESTTT-SCSCHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEC-HH---H------------HHHH---HHHcCCCCCe-EEEEeCCCC-CCCcHHHHHH
Confidence 46778765555455677777654 21 1 1222 2222333443 3 234443 4455565666
Q ss_pred HHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCC-cceeEEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 239 ILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 239 ~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~-~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
-++.+++.|||.|-+.=-+|. ..-+.+.+-|..+++..++. -++.|+.-..++--... -+..|+++|||+|-+|
T Consensus 131 Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~-A~~ia~eaGADfVKTS- 208 (288)
T 3oa3_A 131 EAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIA-GCVLSSLAGADYVKTS- 208 (288)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHH-HHHHHHHTTCSEEECC-
T ss_pred HHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHH-HHHHHHHcCCCEEEcC-
Confidence 678888999999987766776 45578888889998876431 13555555555544433 4678889999999999
Q ss_pred cccccccCcccHHHHHHHHH
Q 013498 315 NGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 315 ~GlGeraGNa~lEevv~~L~ 334 (442)
.|.+ .|++.+|++..+.+
T Consensus 209 TGf~--~~GAT~edv~lmr~ 226 (288)
T 3oa3_A 209 TGFN--GPGASIENVSLMSA 226 (288)
T ss_dssp CSSS--SCCCCHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHH
Confidence 6665 47888888755544
No 105
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=93.61 E-value=3.4 Score=40.06 Aligned_cols=182 Identities=19% Similarity=0.212 Sum_probs=116.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCC----ChhH-HHHHHHHHHHhcccccccCCccceEe--eecccchhhHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAA----SKED-FEAVRTIAKEVGNAVDAESGYVPVIC--GLSRCNERDIKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~--~~~r~~~~dI~~a~ 169 (442)
..+.+....+++.-.+.+-+.|=-.+|.. +.+. ...++.+++.. -+|+.. .++. ..+.+..++
T Consensus 25 v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~---------~VPValHlDHg~-~~e~i~~ai 94 (286)
T 1gvf_A 25 IHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTY---------NMPLALHLDHHE-SLDDIRRKV 94 (286)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHT---------TSCBEEEEEEEC-CHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhC---------CCcEEEEcCCCC-CHHHHHHHH
Confidence 46789999999999999999764434432 1111 23444444431 134332 3332 456677776
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--Ec----cCC--------CCCCCHHH
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FS----PED--------AGRSDRKF 235 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~----~ed--------asr~d~~~ 235 (442)
++ |...|.+ -.| ..+.+|+++..++.+++|+..|.. |+ ++ .|| ...+||+.
T Consensus 95 ~~----GFtSVMi--DgS--------~lp~eeNi~~Tk~vv~~ah~~gvs-VEaElG~vgg~ed~~~~~~~~~~~T~Pee 159 (286)
T 1gvf_A 95 HA----GVRSAMI--DGS--------HFPFAENVKLVKSVVDFCHSQDCS-VEAELGRLGGVEDDMSVDAESAFLTDPQE 159 (286)
T ss_dssp HT----TCCEEEE--CCT--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCC-----------CCSSCCHHH
T ss_pred Hc----CCCeEEE--CCC--------CCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeeccCcccCcccccccccCCCHHH
Confidence 64 8877643 233 346799999999999999999983 54 22 132 23589998
Q ss_pred HHHHHHHHHHcCCcEEecc--Cccccc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 236 LYEILGEVIKVGATTLNIP--DTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~la--DT~G~~--~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
..+++++ .|+|.+-++ -.=|.. .|.-=.++++.+++.++ +||.+|.= -|.....-..|+..|+.-|+
T Consensus 160 a~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~----vpLVlHGg--SG~~~e~i~~ai~~Gv~KiN 230 (286)
T 1gvf_A 160 AKRFVEL---TGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVD----VPLVLHGA--SDVPDEFVRRTIELGVTKVN 230 (286)
T ss_dssp HHHHHHH---HCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCC----SCEEECCC--TTCCHHHHHHHHHTTEEEEE
T ss_pred HHHHHHH---HCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcC----CCEEEECC--CCCCHHHHHHHHHCCCeEEE
Confidence 8777764 589854443 222332 34444577888888874 78887774 46667778888888887774
Q ss_pred e
Q 013498 312 V 312 (442)
Q Consensus 312 ~ 312 (442)
.
T Consensus 231 i 231 (286)
T 1gvf_A 231 V 231 (286)
T ss_dssp E
T ss_pred E
Confidence 3
No 106
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=93.59 E-value=0.44 Score=47.79 Aligned_cols=204 Identities=13% Similarity=0.106 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEc----cCCCC-----hhHHHHHHHHHHHhcccccccCCccceEee------------
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAG----FPAAS-----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------ 156 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG----~p~~~-----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~------------ 156 (442)
++.+++++.+ .++|++.||+. +|... +++.+.++.+.+..+-.+ ..+..
T Consensus 33 ~~~~e~l~~a---a~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i-------~~~~~~~~~~p~~~~g~ 102 (387)
T 1bxb_A 33 LDPVYVVHKL---AELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKV-------PMVTANLFSDPAFKDGA 102 (387)
T ss_dssp CCHHHHHHHH---HHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGGGCS
T ss_pred CCHHHHHHHH---HHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEE-------EEEecCCCCCccccCCC
Confidence 5666665555 45699999998 66432 345556666555433221 11211
Q ss_pred ecccch-------hhHHHHHHHHHhCCCCEEEEeecCC--hHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC
Q 013498 157 LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATS--GIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED 227 (442)
Q Consensus 157 ~~r~~~-------~dI~~a~e~l~~~g~~~v~i~~~~S--d~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed 227 (442)
++-.+. +.++.+++.....|.+.|.+..+.. +...........+...+.+.++++++++.|.. |.+..|.
T Consensus 103 l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~g-v~l~lE~ 181 (387)
T 1bxb_A 103 FTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYG-YRFALEP 181 (387)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCC-CEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCC-cEEEEec
Confidence 111111 2344556665667888887654311 00000011223466778888899999998421 3343332
Q ss_pred CC--------CCCHHHHHHHHHHHHHcCCcE-Eec-cCcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchH
Q 013498 228 AG--------RSDRKFLYEILGEVIKVGATT-LNI-PDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLS 295 (442)
Q Consensus 228 as--------r~d~~~l~~~~~~~~~~Gad~-I~l-aDT~G~~~P--~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA 295 (442)
-. -.+++.+.+++ .+.+... +.+ -||. .+.. ..+.+.++.+.. .+ -...+|.++..+.
T Consensus 182 ~~~~~~~~~~~~t~~~~~~ll---~~v~~~~~vgl~lD~g-H~~~~g~d~~~~l~~~~~-~~----~i~~vHl~D~~~~- 251 (387)
T 1bxb_A 182 KPNEPRGDIYFATVGSMLAFI---HTLDRPERFGLNPEFA-HETMAGLNFVHAVAQALD-AG----KLFHIDLNDQRMS- 251 (387)
T ss_dssp CSSSSSSEESSCSHHHHHHHH---TTSSSGGGEEECCBHH-HHHHTTCCHHHHHHHHHH-TT----CBCCEECCBCCSS-
T ss_pred CCCCCCCCccCCCHHHHHHHH---HHcCCccceEEEEecC-cccccCCCHHHHHHHhcc-CC----cEEEEEeCCCCCC-
Confidence 21 23455555544 3445443 443 3663 2211 223344554441 12 2357888876441
Q ss_pred HHHHHHHHHhCCCEEEecccccccccCcc-cHHHHHHHHHhccc
Q 013498 296 TANTIAGACAGARQVEVTINGIGERAGNA-SLEEVVMAFKCRGE 338 (442)
Q Consensus 296 ~ANalaAl~aGa~~vd~Tv~GlGeraGNa-~lEevv~~L~~~g~ 338 (442)
. + | -+++.+.|+. ++.+++..|+..|.
T Consensus 252 -----------~-~-d---~~l~~G~~d~~~~~~i~~~L~~~Gy 279 (387)
T 1bxb_A 252 -----------R-F-D---QDLRFGSENLKAAFFLVDLLESSGY 279 (387)
T ss_dssp -----------S-S-C---CCBCTTSSCHHHHHHHHHHHHHTTC
T ss_pred -----------C-C-c---CCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 1 1 1 2233334554 25555777876653
No 107
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=93.46 E-value=0.38 Score=47.08 Aligned_cols=85 Identities=19% Similarity=0.157 Sum_probs=75.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+.+...+ +++|-+|. +|+.--++..+..|-
T Consensus 30 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD--RARVIAGAGTYDTAHSIRLAKACA 107 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999986 7899999999999887765 47888887 799999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=..-
T Consensus 108 ~~Gadavlv~~ 118 (304)
T 3l21_A 108 AEGAHGLLVVT 118 (304)
T ss_dssp HHTCSEEEEEC
T ss_pred HcCCCEEEECC
Confidence 99999986654
No 108
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=93.30 E-value=2.4 Score=39.86 Aligned_cols=195 Identities=17% Similarity=0.130 Sum_probs=117.7
Q ss_pred EEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeeccc
Q 013498 81 RVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC 160 (442)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~ 160 (442)
..+|-|+ .+-.-+.++..++.+...+.|+..+-+ +|...+ ... .+..+ . ..+..+.+|--.
T Consensus 15 ~~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV-~p~~v~-------~a~-~l~~~---~-v~v~tVigFP~G 75 (231)
T 3ndo_A 15 ALVDHTL------LKPEATPSDVTALVDEAADLGVFAVCV-SPPLVS-------VAA-GVAPS---G-LAIAAVAGFPSG 75 (231)
T ss_dssp TTEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE-CGGGHH-------HHH-HHCCT---T-CEEEEEESTTTC
T ss_pred HhcCccc------CCCCCCHHHHHHHHHHHHHhCCcEEEE-CHHHHH-------HHH-HhcCC---C-CeEEEEecCCCC
Confidence 4677777 234578899999999999999999998 664432 222 22211 0 011222233211
Q ss_pred -chhh--HHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCC----CH
Q 013498 161 -NERD--IKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS----DR 233 (442)
Q Consensus 161 -~~~d--I~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~----d~ 233 (442)
...+ +..+-+++ ..|.+.|.+.+....+ ..-..+++.+.+...++.+. |. .+-+-+|. ... ++
T Consensus 76 ~~~~~~K~~E~~~Ai-~~GAdEIDmVinig~l-----k~g~~~~v~~ei~~v~~a~~--~~-~lKvIiEt-~~L~~~~t~ 145 (231)
T 3ndo_A 76 KHVPGIKATEAELAV-AAGATEIDMVIDVGAA-----LAGDLDAVSADITAVRKAVR--AA-TLKVIVES-AALLEFSGE 145 (231)
T ss_dssp CSCHHHHHHHHHHHH-HTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTT--TS-EEEEECCH-HHHHHHTCH
T ss_pred CCcHHHHHHHHHHHH-HcCCCEEEEEeehHhh-----hcccHHHHHHHHHHHHHHcc--CC-ceEEEEEC-cccCCCCCH
Confidence 1112 22223333 3599999998876532 22467778888888777765 43 24444443 344 78
Q ss_pred HHHHHHHHHHHHcCCcEEeccC--c-ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 234 KFLYEILGEVIKVGATTLNIPD--T-VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laD--T-~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+.+.+.++.+.++|+|.|--.- + .|-+++++++-+-+.+...++ +...==.+ + ...+++-+++||++|
T Consensus 146 eei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~~~v~----VKaaGGIr-t----~~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 146 PLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERLG----VKASGGIR-T----AEQAAAMLDAGATRL 216 (231)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHTTTSE----EEEESSCC-S----HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhCCCce----EEEeCCCC-C----HHHHHHHHHhcchhc
Confidence 9999999999999999987764 2 467788877765554432221 22221112 1 267888889999988
Q ss_pred Eec
Q 013498 311 EVT 313 (442)
Q Consensus 311 d~T 313 (442)
=+|
T Consensus 217 GtS 219 (231)
T 3ndo_A 217 GLS 219 (231)
T ss_dssp EES
T ss_pred ccc
Confidence 554
No 109
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.28 E-value=6.1 Score=38.00 Aligned_cols=193 Identities=14% Similarity=0.121 Sum_probs=117.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (442)
+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pvi~Gvg~~~t~~ai~la~~ 91 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVN-------KRIPVIAGTGSNNTAASIAMSKW 91 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCcccHHHHHHHHHH
Confidence 77888889999999999999877 4 455666665 45565555542 2357888877655444 444433
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcCC
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 248 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~Ga 248 (442)
.+.+|++.+-+..|-. ++.|.++.++-..+.++ ..+++-+-++.+. ....+++.+.+++ +. .
T Consensus 92 -a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~-p 155 (291)
T 3a5f_A 92 -AESIGVDGLLVITPYY-------NKTTQKGLVKHFKAVSD---AVSTPIIIYNVPGRTGLNITPGTLKELC----ED-K 155 (291)
T ss_dssp -HHHTTCSEEEEECCCS-------SCCCHHHHHHHC-CTGG---GCCSCEEEEECHHHHSCCCCHHHHHHHT----TS-T
T ss_pred -HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----cC-C
Confidence 3567999887765532 23466665554444332 3355534455432 3345777776665 22 5
Q ss_pred cEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHH
Q 013498 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 328 (442)
Q Consensus 249 d~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEe 328 (442)
..+.+.||.|- ..++.++++..... ..+ +-.++++ .+.++..|++.+ +.| .+|...+.
T Consensus 156 nivgiK~s~gd--~~~~~~~~~~~~~~------f~v-~~G~d~~------~~~~l~~G~~G~---is~----~an~~P~~ 213 (291)
T 3a5f_A 156 NIVAVXEASGN--ISQIAQIKALCGDK------LDI-YSGNDDQ------IIPILALGGIGV---ISV----LANVIPED 213 (291)
T ss_dssp TEEEEEECSCC--HHHHHHHHHHHGGG------SEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHHH
T ss_pred CEEEEeCCCCC--HHHHHHHHHhcCCC------eEE-EeCcHHH------HHHHHHCCCCEE---Eec----HHHhcHHH
Confidence 78999999985 45666666554322 222 4444432 456777897653 332 45677777
Q ss_pred HHHHHHh
Q 013498 329 VVMAFKC 335 (442)
Q Consensus 329 vv~~L~~ 335 (442)
++...+.
T Consensus 214 ~~~l~~a 220 (291)
T 3a5f_A 214 VHNMCEL 220 (291)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 110
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=93.14 E-value=1.4 Score=44.60 Aligned_cols=176 Identities=15% Similarity=0.168 Sum_probs=108.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEcc--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHH
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 168 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~--p~~~~--------~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 168 (442)
+.++.+++++.+.++|++.|=.+. |..++ +.+..++.+++.. ++ |.++ .-.....++..
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--------Gl-~~~t--e~~d~~~~~~l 222 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--------GL-GVIS--EIVTPADIEVA 222 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEE--ECCSGGGHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--------CC-EEEE--ecCCHHHHHHH
Confidence 899999999999999999998774 32222 2233444444432 22 2222 12355566654
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCC
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGA 248 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Ga 248 (442)
.+ . ++.+.| +..+. + + .++++++.+.|.. |.+.- +.-.+++.+...++.+.+.|.
T Consensus 223 ~~----~-vd~lkI--gs~~~--------~------n-~~LL~~~a~~gkP-Vilk~--G~~~t~~e~~~Ave~i~~~Gn 277 (385)
T 3nvt_A 223 LD----Y-VDVIQI--GARNM--------Q------N-FELLKAAGRVDKP-ILLKR--GLSATIEEFIGAAEYIMSQGN 277 (385)
T ss_dssp TT----T-CSEEEE--CGGGT--------T------C-HHHHHHHHTSSSC-EEEEC--CTTCCHHHHHHHHHHHHTTTC
T ss_pred Hh----h-CCEEEE--Ccccc--------c------C-HHHHHHHHccCCc-EEEec--CCCCCHHHHHHHHHHHHHcCC
Confidence 33 2 666665 32221 1 0 1566777788886 77753 333788999999999999999
Q ss_pred cEEeccCc--ccccC-HHH-H-HHHHHHHHHhCCCCcceeEEEeecC--CcchHHHHHHHHHHhCCC--EEEec
Q 013498 249 TTLNIPDT--VGITM-PTE-F-GKLIADIKANTPGIENVVISTHCQN--DLGLSTANTIAGACAGAR--QVEVT 313 (442)
Q Consensus 249 d~I~laDT--~G~~~-P~~-v-~~li~~l~~~~p~~~~v~i~~H~HN--DlGLA~ANalaAl~aGa~--~vd~T 313 (442)
..|.|+.- ..+-+ |.. + -.-+..+++.+. . .+ +.=|+|. +..+...-+++|+.+||+ .|+.=
T Consensus 278 ~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~-l-pV-~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 278 GKIILCERGIRTYEKATRNTLDISAVPILKKETH-L-PV-MVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp CCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS-S-CE-EEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred CeEEEEECCCCCCCCCCccccCHHHHHHHHHhcC-C-CE-EEcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 87888774 22211 222 1 122556777542 1 14 5557774 455666789999999999 78763
No 111
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.14 E-value=0.38 Score=46.64 Aligned_cols=85 Identities=20% Similarity=0.136 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK--RIPIIAGTGANSTREAIELTKAAK 93 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999995 7899999999999887755 46777776 689999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=...
T Consensus 94 ~~Gadavlv~~ 104 (291)
T 3tak_A 94 DLGADAALLVT 104 (291)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEEcC
Confidence 99999986643
No 112
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=93.08 E-value=1.5 Score=41.82 Aligned_cols=207 Identities=17% Similarity=0.152 Sum_probs=107.5
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCC---CChhHHHHHHHHHHHhcccccccCCccceEe
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPA---ASKEDFEAVRTIAKEVGNAVDAESGYVPVIC 155 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~---~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~ 155 (442)
++-+.-.++++.. ...+.++ ++.+.++|++.||+..+. ..+.+.+.++.+.+..+-.+. ...
T Consensus 22 klg~~~~~~~~~~----~~~~l~~----l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~-------~~~ 86 (309)
T 2hk0_A 22 KHGIYYSYWEHEW----SAKFGPY----IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILT-------AGI 86 (309)
T ss_dssp EEEEEGGGGCSCT----TSCSHHH----HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEE-------EEC
T ss_pred eeEEehhhccccc----ccccHHH----HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEE-------Eec
Confidence 3556555665421 1235554 555667899999996431 122455566665554322110 111
Q ss_pred e------ecccc-------hhhHHHHHHHHHhCCCCEEEEeec--CChHHHHHHhCC-C----HHHHHHHHHHHHHHHHH
Q 013498 156 G------LSRCN-------ERDIKTAWEAVKYAKRPRIHTFIA--TSGIHMEHKLRK-T----KQQVVEIARSMVKFARS 215 (442)
Q Consensus 156 ~------~~r~~-------~~dI~~a~e~l~~~g~~~v~i~~~--~Sd~h~~~~l~~-s----~~e~l~~~~~~v~~ar~ 215 (442)
. ++..+ .+.++++++.....|.+.|..... .... .-.. + .+...+.+.+++++|++
T Consensus 87 ~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~----~~~~~~~~~~~~~~~~~l~~l~~~a~~ 162 (309)
T 2hk0_A 87 GPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPID----YSQPVDKAGDYARGVEGINGIADFAND 162 (309)
T ss_dssp CCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCC----TTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeecccccccc----CCCcCChHHHHHHHHHHHHHHHHHHHH
Confidence 1 11111 134566677777789998874320 0000 0011 2 24456667778888999
Q ss_pred cCCCeEEEccCC----CCCCCHHHHHHHHHHHHHcCCcEEec-cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeec
Q 013498 216 LGCDDVEFSPED----AGRSDRKFLYEILGEVIKVGATTLNI-PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQ 289 (442)
Q Consensus 216 ~G~~~V~f~~ed----asr~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~-P~~v~~li~~l~~~~p~~~~v~i~~H~H 289 (442)
.|+. +.+-... ..-.+++.+.++++.+ +.+.+.+ -||.=... -....+.++.+.. -...+|.|
T Consensus 163 ~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~-------~i~~vHl~ 231 (309)
T 2hk0_A 163 LGIN-LCIEVLNRFENHVLNTAAEGVAFVKDV---GKNNVKVMLDTFHMNIEEDSFGDAIRTAGP-------LLGHFHTG 231 (309)
T ss_dssp TTCE-EEEECCCTTTCSSCCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHHCSCHHHHHHHHGG-------GEEEEEEC
T ss_pred cCCE-EEEeecccccccccCCHHHHHHHHHHc---CCCCeEEEEehhhHhhcCcCHHHHHHHHHh-------hEEEEEeC
Confidence 9974 5553321 1224667777776665 3332332 36531110 0112233333322 34789999
Q ss_pred CCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 290 NDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 290 NDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
|... .-+|+ |..+.++++..|+..|.
T Consensus 232 D~~r---------------------~~~G~--G~id~~~~~~~L~~~gy 257 (309)
T 2hk0_A 232 ESNR---------------------RVPGK--GRMPWHEIGLALRDINY 257 (309)
T ss_dssp CTTS---------------------CCTTS--SCCCHHHHHHHHHHTTC
T ss_pred CCCC---------------------CCCcC--CccCHHHHHHHHHHcCC
Confidence 8621 12343 88999999999998653
No 113
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=93.08 E-value=2.2 Score=41.26 Aligned_cols=139 Identities=9% Similarity=0.068 Sum_probs=84.0
Q ss_pred cchhhHHHHHHHHHhCCCC-EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCCCCCCCHHHH
Q 013498 160 CNERDIKTAWEAVKYAKRP-RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRKFL 236 (442)
Q Consensus 160 ~~~~dI~~a~e~l~~~g~~-~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~edasr~d~~~l 236 (442)
...++...+.+.+..+|.+ .|.+.++..-..-...++.+.+. +.+.++.+|+. ++. .|.+.+ + .+.+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~----~~~iv~~vr~~~~~Pv~vKi~~-~---~~~~~~ 174 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEA----TEKLLKEVFTFFTKPLGVKLPP-Y---FDLVHF 174 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHH----HHHHHHHHTTTCCSCEEEEECC-C---CSHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHH----HHHHHHHHHHhcCCCEEEEECC-C---CCHHHH
Confidence 3567777777777778888 77775542211111123334443 45566666665 443 133333 2 367788
Q ss_pred HHHHHHHHHcCCcEEeccCccc-------------------------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 013498 237 YEILGEVIKVGATTLNIPDTVG-------------------------ITMPTEFGKLIADIKANTPGIENVVISTHCQND 291 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT~G-------------------------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HND 291 (442)
.++++.+.++|+|.|.+.++.+ ........++++.+++.+++ +++|..=.
T Consensus 175 ~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~--~ipvi~~G--- 249 (311)
T 1jub_A 175 DIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKP--EIQIIGTG--- 249 (311)
T ss_dssp HHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCT--TSEEEEES---
T ss_pred HHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCC--CCCEEEEC---
Confidence 8999999999999999988752 11111235778888887753 35555433
Q ss_pred cchH-HHHHHHHHHhCCCEEEe
Q 013498 292 LGLS-TANTIAGACAGARQVEV 312 (442)
Q Consensus 292 lGLA-~ANalaAl~aGa~~vd~ 312 (442)
|.. -..+.+++.+||+.|..
T Consensus 250 -GI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 250 -GIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp -SCCSHHHHHHHHHHTCSEEEE
T ss_pred -CCCCHHHHHHHHHcCCCEEEE
Confidence 332 24666777889998854
No 114
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=92.99 E-value=6.8 Score=37.70 Aligned_cols=195 Identities=13% Similarity=0.098 Sum_probs=118.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 89 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTAN-------GRVPVIAGAGSNSTAEAIAFVR 89 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCccHHHHHHHHH
Confidence 367788889999999999999876 4 455666665 45565555542 2357788877655444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. ...+|++.+-+..|-. ++.|.++.++-....++ ..++.-+-++.+. ....+++.+.++++. .
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~~---~- 154 (292)
T 2vc6_A 90 H-AQNAGADGVLIVSPYY-------NKPTQEGIYQHFKAIDA---ASTIPIIVYNIPGRSAIEIHVETLARIFED---C- 154 (292)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHHH---C-
T ss_pred H-HHHcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEeCccccCcCCCHHHHHHHHhh---C-
Confidence 3 3567999887765532 23466666665555543 3355534555432 335677877776532 2
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|-+ .++.++++ ..++ +..+ +-.+++ ..+.++..|++.+ +.| .+|...+
T Consensus 155 pnIvgiK~s~gd~--~~~~~~~~----~~~~--~f~v-~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P~ 212 (292)
T 2vc6_A 155 PNVKGVXDATGNL--LRPSLERM----ACGE--DFNL-LTGEDG------TALGYMAHGGHGC---ISV----TANVAPA 212 (292)
T ss_dssp TTEEEEEECSCCT--HHHHHHHH----HSCT--TSEE-EESCGG------GHHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEecCCCCH--HHHHHHHH----HcCC--CEEE-EECchH------HHHHHHHcCCCEE---Eec----HHHhCHH
Confidence 6799999999853 45554443 3442 2333 334433 2466788898743 222 3567777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 213 ~~~~l~~a 220 (292)
T 2vc6_A 213 LCADFQQA 220 (292)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 115
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.94 E-value=0.46 Score=46.23 Aligned_cols=85 Identities=18% Similarity=0.129 Sum_probs=74.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK--RVPVIAGTGANNTVEAIALSQAAE 99 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHHHHHHH
Confidence 46799999999999999999999999999995 7899999999999887754 46777776 689999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=..-
T Consensus 100 ~~Gadavlv~~ 110 (297)
T 3flu_A 100 KAGADYTLSVV 110 (297)
T ss_dssp HTTCSEEEEEC
T ss_pred HcCCCEEEECC
Confidence 99999986654
No 116
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.94 E-value=7.1 Score=37.83 Aligned_cols=191 Identities=14% Similarity=0.170 Sum_probs=117.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~st~~ai~la~ 105 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-------DRAKLIAGVGTNNTRTSVELAE 105 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEecCCCCCHHHHHHHHH
Confidence 478888899999999999998866 4 455666665 45565555542 2357888887655444 45543
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. .+.+|++.+-+..|-. .+.+.++.++-....++ ..+++-+-++.+. ....+++.+.+++ + -
T Consensus 106 ~-A~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 169 (304)
T 3cpr_A 106 A-AASAGADGLLVVTPYY-------SKPSQEGLLAHFGAIAA---ATEVPICLYDIPGRSGIPIESDTMRRLS----E-L 169 (304)
T ss_dssp H-HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCCSCEEEEECHHHHSSCCCHHHHHHHT----T-S
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHH----c-C
Confidence 3 3567999887765532 23466666665555543 3355544555532 3356777776665 2 2
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.+++... .+ .+ +-.++++ .+.++..|++.+ +.| .+|...+
T Consensus 170 pnIvgiKdssgd--~~~~~~~~~~~--~f------~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 225 (304)
T 3cpr_A 170 PTILAVXDAKGD--LVAATSLIKET--GL------AW-YSGDDPL------NLVWLALGGSGF---ISV----IGHAAPT 225 (304)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHH--CC------EE-EECSGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEecCCCC--HHHHHHHHHhc--CE------EE-EECcHHH------HHHHHHCCCCEE---Eec----HHHhhHH
Confidence 579999999985 35666666543 22 12 3344432 355677887643 222 3567677
Q ss_pred HHHHHHH
Q 013498 328 EVVMAFK 334 (442)
Q Consensus 328 evv~~L~ 334 (442)
.++...+
T Consensus 226 ~~~~l~~ 232 (304)
T 3cpr_A 226 ALRELYT 232 (304)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 117
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=92.94 E-value=3 Score=40.67 Aligned_cols=133 Identities=13% Similarity=0.105 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecC-ChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-CC----CCCCCH-HH
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-ED----AGRSDR-KF 235 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~-Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~-ed----asr~d~-~~ 235 (442)
..++.+++. |.+.|.+.+-. ++ .+..+.++.+.++++.|++.|+. +.+.+ .+ ....++ +.
T Consensus 112 ~~ve~a~~~----GAdaV~vlv~~~~d--------~~~~~~~~~i~~v~~~~~~~G~p-~lv~~~~~g~~v~~~~~~~~~ 178 (304)
T 1to3_A 112 INAQAVKRD----GAKALKLLVLWRSD--------EDAQQRLNMVKEFNELCHSNGLL-SIIEPVVRPPRCGDKFDREQA 178 (304)
T ss_dssp CCHHHHHHT----TCCEEEEEEEECTT--------SCHHHHHHHHHHHHHHHHTTTCE-EEEEEEECCCSSCSCCCHHHH
T ss_pred hhHHHHHHc----CCCEEEEEEEcCCC--------ccHHHHHHHHHHHHHHHHHcCCc-EEEEEECCCCccccCCChhHH
Confidence 456666664 88877754321 21 12467789999999999999986 33222 11 112355 88
Q ss_pred HHHHHHHHHHcCCcEEeccCc-ccccCHHHHHHHHHHHHHhCCCCccee-EEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 LYEILGEVIKVGATTLNIPDT-VGITMPTEFGKLIADIKANTPGIENVV-ISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT-~G~~~P~~v~~li~~l~~~~p~~~~v~-i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
+.+.++.+.+.|+|.|.+.=+ .|...++.+.++++....+.+ +| |.+=.=.+.-..+.|.-.++++|++.|-+
T Consensus 179 v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~----~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 179 IIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN----MPWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC----SCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC----CCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 888899999999999876543 233488888888888666543 34 32222224445567888889999987744
No 118
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=92.90 E-value=0.49 Score=46.21 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=73.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+++.|++.|.++-|+| .+++++-.++++.+.+...+ +++|-+++ +|+.--++..+..|-
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG--KIKLIAHVGCVSTAESQQLAASAK 103 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 3688999999999999999999999999998 48999999999999887654 47777776 678888899999999
Q ss_pred HhCCCEEEeccc
Q 013498 304 CAGARQVEVTIN 315 (442)
Q Consensus 304 ~aGa~~vd~Tv~ 315 (442)
++||+.+=+..-
T Consensus 104 ~~Gadavlv~~P 115 (303)
T 2wkj_A 104 RYGFDAVSAVTP 115 (303)
T ss_dssp HHTCSEEEEECC
T ss_pred hCCCCEEEecCC
Confidence 999999866543
No 119
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=92.85 E-value=0.27 Score=46.02 Aligned_cols=167 Identities=18% Similarity=0.110 Sum_probs=93.0
Q ss_pred HHHHHHHHHHhHcCCCEEEEcc------CCCChhHHHHHHHHHHHhcccccccCCccceEeeecccc-hhhHHHHHHHHH
Q 013498 101 KEKLDIARQLAKLGVDIIEAGF------PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVK 173 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~------p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~e~l~ 173 (442)
..-.+.++.+.+.|++.|+++. |..+ .-.+.++.+.+..... +..-+.. .+ .+.++.+.++
T Consensus 17 ~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~-~g~~~v~~lr~~~~~~------~~vhlmv---~dp~~~i~~~~~a-- 84 (230)
T 1tqj_A 17 SRLGEEIKAVDEAGADWIHVDVMDGRFVPNIT-IGPLIVDAIRPLTKKT------LDVHLMI---VEPEKYVEDFAKA-- 84 (230)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBC-BCHHHHHHHGGGCCSE------EEEEEES---SSGGGTHHHHHHH--
T ss_pred hHHHHHHHHHHHcCCCEEEEEEEecCCCcchh-hhHHHHHHHHhhcCCc------EEEEEEc---cCHHHHHHHHHHc--
Confidence 3445667888899999999863 2211 1235666665432100 1111221 12 2346767665
Q ss_pred hCCCCEEEEeec--CChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 174 YAKRPRIHTFIA--TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 174 ~~g~~~v~i~~~--~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
|.+.|++..- ..+ ...+.++.+++.|+. +.+.+. ..++.+.+..++ .++|.|
T Consensus 85 --Gadgv~vh~e~~~~~----------------~~~~~~~~i~~~g~~-~gv~~~--p~t~~e~~~~~~-----~~~D~v 138 (230)
T 1tqj_A 85 --GADIISVHVEHNASP----------------HLHRTLCQIRELGKK-AGAVLN--PSTPLDFLEYVL-----PVCDLI 138 (230)
T ss_dssp --TCSEEEEECSTTTCT----------------THHHHHHHHHHTTCE-EEEEEC--TTCCGGGGTTTG-----GGCSEE
T ss_pred --CCCEEEECcccccch----------------hHHHHHHHHHHcCCc-EEEEEe--CCCcHHHHHHHH-----hcCCEE
Confidence 8999887654 332 233677888999984 655541 123333332222 278876
Q ss_pred ecc----CcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 252 NIP----DTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 252 ~la----DT~G~~~P~~v~~li~~l~~~~p--~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
++- -+.|.-.+....+.++.+++..+ +. +++|.+ |.|.-..|+-...++||+.+
T Consensus 139 ~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~-~~~I~v----~GGI~~~~~~~~~~aGad~v 198 (230)
T 1tqj_A 139 LIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGL-DPWIEV----DGGLKPNNTWQVLEAGANAI 198 (230)
T ss_dssp EEESSCC----CCCCGGGHHHHHHHHHHHHHHTC-CCEEEE----ESSCCTTTTHHHHHHTCCEE
T ss_pred EEEEeccccCCccCcHHHHHHHHHHHHHHHhcCC-CCcEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 332 22233334455666677766542 00 245665 67877788888999999986
No 120
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.83 E-value=0.86 Score=46.12 Aligned_cols=139 Identities=13% Similarity=0.199 Sum_probs=87.7
Q ss_pred HHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCC
Q 013498 108 RQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATS 187 (442)
Q Consensus 108 ~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~S 187 (442)
+.|.+.|++.+-+|+.- -.++..++.+++.. .|.|..-+.++.++|+.|++.+...|...|.+.=++|
T Consensus 128 d~l~~~~vd~~KIgS~~--~~N~pLL~~va~~g----------KPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s 195 (385)
T 1vli_A 128 DLLQSTSPSAFKIASYE--INHLPLLKYVARLN----------RPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVA 195 (385)
T ss_dssp HHHHTTCCSCEEECGGG--TTCHHHHHHHHTTC----------SCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECS
T ss_pred HHHHhcCCCEEEECccc--ccCHHHHHHHHhcC----------CeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccC
Confidence 44455556666665432 23577888877631 2667666667899999999999888876665543333
Q ss_pred hHHH-HHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEe--------c--c
Q 013498 188 GIHM-EHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN--------I--P 254 (442)
Q Consensus 188 d~h~-~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~--------l--a 254 (442)
..-. ...++. .+|...++. ++. |.++-=..++ ..+..+++.+||+.|- + +
T Consensus 196 ~YPtp~~~~nL----------~aI~~Lk~~f~~lp-VG~SdHt~G~------~~~~~AAvAlGA~iIEkHftldra~~G~ 258 (385)
T 1vli_A 196 KYPAPPEYSNL----------SVIPMLAAAFPEAV-IGFSDHSEHP------TEAPCAAVRLGAKLIEKHFTIDKNLPGA 258 (385)
T ss_dssp SSSCCGGGCCT----------THHHHHHHHSTTSE-EEEEECCSSS------SHHHHHHHHTTCSEEEEEBCSCTTSSCS
T ss_pred CCCCChhhcCH----------HHHHHHHHHcCCCC-EEeCCCCCCc------hHHHHHHHHcCCCEEEeCCCccccCCCC
Confidence 2100 011222 234444554 464 6553211223 4677788899999764 4 7
Q ss_pred CcccccCHHHHHHHHHHHHHh
Q 013498 255 DTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 255 DT~G~~~P~~v~~li~~l~~~ 275 (442)
|..=.+.|+++.+|++.+++.
T Consensus 259 D~~~SL~P~ef~~lv~~ir~i 279 (385)
T 1vli_A 259 DHSFALNPDELKEMVDGIRKT 279 (385)
T ss_dssp SCTTSBCHHHHHHHHHHHHHH
T ss_pred chhhhCCHHHHHHHHHHHHHH
Confidence 888899999999999999864
No 121
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=92.81 E-value=0.95 Score=43.61 Aligned_cols=213 Identities=11% Similarity=0.011 Sum_probs=105.7
Q ss_pred ceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccC--------CCChh-----HHHHHHHHHHHhccccc
Q 013498 79 YVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFP--------AASKE-----DFEAVRTIAKEVGNAVD 145 (442)
Q Consensus 79 ~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p--------~~~~~-----d~e~v~~l~~~~~~~~~ 145 (442)
++-|.=-|+||-... + -.+.++.+.++|++.||+... ...++ +.+.++.+.+..+-.+.
T Consensus 22 ~~g~~~~s~~~~~~~-----~---l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~ 93 (305)
T 3obe_A 22 KMGLQTYSLGQELLQ-----D---MPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRIS 93 (305)
T ss_dssp CCEEEGGGGTHHHHT-----T---HHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEEchhhhhc-----C---HHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEE
Confidence 455555666663211 2 345667778889999999632 12233 55666666554332110
Q ss_pred ccCCccceEeeeccc----chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeE
Q 013498 146 AESGYVPVICGLSRC----NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDV 221 (442)
Q Consensus 146 ~~~~l~~~i~~~~r~----~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V 221 (442)
.. .....+..+... ..+.++.+++.....|.+.|.+. ...+.... ...+..++.+.+++++|++.|+. +
T Consensus 94 ~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~-l 166 (305)
T 3obe_A 94 SS-HLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQP-SLPRIENE----DDAKVVSEIFNRAGEITKKAGIL-W 166 (305)
T ss_dssp EE-BCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEEC-CCCCCSSH----HHHHHHHHHHHHHHHHHHTTTCE-E
T ss_pred Ee-eccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeC-CCCCCCCH----HHHHHHHHHHHHHHHHHHHcCCE-E
Confidence 00 000000001111 12345666666666788988753 21110000 01345567788889999999974 5
Q ss_pred EEccCCC---CC-----------------CCHHHHHHHHHHHHHcCCcEEec-cCcccccCHHHHHHHHHHHHHhCCCCc
Q 013498 222 EFSPEDA---GR-----------------SDRKFLYEILGEVIKVGATTLNI-PDTVGITMPTEFGKLIADIKANTPGIE 280 (442)
Q Consensus 222 ~f~~eda---sr-----------------~d~~~l~~~~~~~~~~Gad~I~l-aDT~G~~~P~~v~~li~~l~~~~p~~~ 280 (442)
.+-.... .- .+.+.+..+++ +.+.+.+.+ -||.=...-. .+....+++..+
T Consensus 167 ~lEn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~vg~~lD~~H~~~~g--~d~~~~i~~~~~--- 238 (305)
T 3obe_A 167 GYHNHSNEFKRVLKAGEKPEQNPNPWAPPKGTYIEELFLK---NTDPDKVMFELDVYWAVMGQ--QDPVEWMENYPN--- 238 (305)
T ss_dssp EEECCSGGGSEECCTTCCCC--------CCSEEHHHHHHH---HSCTTTEEEEEEHHHHHHTT--CCHHHHHHHSTT---
T ss_pred EEecCcccccccccccccccccccccccCCChHHHHHHHH---hCCcccEEEEEeHHHHHHcC--CCHHHHHHHhhC---
Confidence 5522110 00 12233333333 345554433 3554111000 112333443322
Q ss_pred ceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhcccc
Q 013498 281 NVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEH 339 (442)
Q Consensus 281 ~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~ 339 (442)
-...+|.+| ..-+|. .|+.+...++..|+..|.+
T Consensus 239 -ri~~vHlkD-----------------------~~~~G~-~G~id~~~i~~~L~~~gy~ 272 (305)
T 3obe_A 239 -RFKLLHIKD-----------------------RWIIGD-SGMMNFPNIFKKAYEIGIL 272 (305)
T ss_dssp -TEEEEEECC-----------------------SSSTTC-SSSBCHHHHHHHHHHHTCC
T ss_pred -ceeEEEecc-----------------------CcCCCC-CCccCHHHHHHHHHHcCCC
Confidence 356889998 234441 4889999999999987644
No 122
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=92.79 E-value=0.62 Score=45.22 Aligned_cols=102 Identities=16% Similarity=0.138 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+...+ .++|-+|+ +|+.--++..+..|-
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--PSRIVTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--GGGEEEEECCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCccHHHHHHHHHHHH
Confidence 36889999999999999999999999999986 8999999999999988765 46666654 678888999999999
Q ss_pred HhCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 304 CAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
++||+.+=+.---.-. +.+-++++..++
T Consensus 96 ~~Gadavlv~~P~y~~---~~s~~~l~~~f~ 123 (294)
T 3b4u_A 96 NAGARNILLAPPSYFK---NVSDDGLFAWFS 123 (294)
T ss_dssp HTTCSEEEECCCCSSC---SCCHHHHHHHHH
T ss_pred hcCCCEEEEcCCcCCC---CCCHHHHHHHHH
Confidence 9999998665433321 124555555443
No 123
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=92.77 E-value=7.3 Score=37.51 Aligned_cols=194 Identities=12% Similarity=0.154 Sum_probs=118.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (442)
+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-.
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~~ 90 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-------GRIKVIAGTGGNATHEAVHLTAH 90 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHHH
Confidence 67788889999999999998876 4 455566664 45565555542 2357888877655444 454433
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcCC
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 248 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~Ga 248 (442)
...+|++.+-+..|-. ++.|.++.++-....++ ..++.-+-++.+. ....+++.+.++++. -.
T Consensus 91 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~~----~p 155 (294)
T 2ehh_A 91 -AKEVGADGALVVVPYY-------NKPTQRGLYEHFKTVAQ---EVDIPIIIYNIPSRTCVEISVDTMFKLASE----CE 155 (294)
T ss_dssp -HHHTTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCCSCEEEEECHHHHSCCCCHHHHHHHHHH----CT
T ss_pred -HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCCcccCcCCCHHHHHHHHhh----CC
Confidence 3567999887765532 24476776666655544 3355534555442 345678877777632 25
Q ss_pred cEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHH
Q 013498 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 328 (442)
Q Consensus 249 d~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEe 328 (442)
..+.+.||.|- ..++.++++.. ++ +..+ +-.+++ ..+.++..|++.+ +.| .+|...+.
T Consensus 156 nivgiKds~gd--~~~~~~~~~~~----~~--~f~v-~~G~d~------~~~~~l~~G~~G~---is~----~an~~P~~ 213 (294)
T 2ehh_A 156 NIVASKESTPN--MDRISEIVKRL----GE--SFSV-LSGDDS------LTLPMMALGAKGV---ISV----ANNVMPRE 213 (294)
T ss_dssp TEEEEEECCSC--HHHHHHHHHHH----CT--TSEE-EESSGG------GHHHHHHTTCCEE---EES----GGGTCHHH
T ss_pred CEEEEEeCCCC--HHHHHHHHHhc----CC--CeEE-EECcHH------HHHHHHHCCCCEE---EeC----HHHhhHHH
Confidence 78999999985 45555555443 32 2222 334443 2456778898653 332 35676777
Q ss_pred HHHHHHh
Q 013498 329 VVMAFKC 335 (442)
Q Consensus 329 vv~~L~~ 335 (442)
++...+.
T Consensus 214 ~~~l~~a 220 (294)
T 2ehh_A 214 VKELIRA 220 (294)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 124
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.74 E-value=1.9 Score=41.26 Aligned_cols=151 Identities=17% Similarity=0.124 Sum_probs=93.2
Q ss_pred cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--EccCCCCCCCHHHHH
Q 013498 160 CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FSPEDAGRSDRKFLY 237 (442)
Q Consensus 160 ~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~~edasr~d~~~l~ 237 (442)
+..+||+...+..+..++..|.++ +.+ +.. +.+..+..+.. |+ ++++. +..+.+--.
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~----p~~------------V~~---a~~~L~gs~v~-v~tVigFP~-G~~~~~~Kv 114 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVN----PCY------------VKL---AREELEGTDVK-VVTVVGFPL-GANETRTKA 114 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC----GGG------------HHH---HHHHHTTSCCE-EEEEESTTT-CCSCHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC----HHH------------HHH---HHHHhcCCCCe-EEEEecCCC-CCCcHHHHH
Confidence 356778766555556677766542 211 122 22223334443 32 35543 344555555
Q ss_pred HHHHHHHHcCCcEEeccCccccc---CHHHHHHHHHHHHHhCCCCc-ceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 238 EILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT~G~~---~P~~v~~li~~l~~~~p~~~-~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
.-++.+++.|||.|-+.=-+|.+ .-..+.+-|..+++..++.. ++.|+.-..+|--. ..-+..|.++|||+|-+|
T Consensus 115 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei-~~A~~ia~eaGADfVKTS 193 (260)
T 3r12_A 115 HEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK-IAACVISKLAGAHFVKTS 193 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-HHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-HHHHHHHHHhCcCEEEcC
Confidence 66777888899998887777774 56778888888887764321 34455544555444 334677889999999999
Q ss_pred ccccccccCcccHHHHHHHHHh
Q 013498 314 INGIGERAGNASLEEVVMAFKC 335 (442)
Q Consensus 314 v~GlGeraGNa~lEevv~~L~~ 335 (442)
.|.+ .|++.+|++-.+.+.
T Consensus 194 -TGf~--~~GAT~edV~lm~~~ 212 (260)
T 3r12_A 194 -TGFG--TGGATAEDVHLMKWI 212 (260)
T ss_dssp -CSSS--SCCCCHHHHHHHHHH
T ss_pred -CCCC--CCCCCHHHHHHHHHH
Confidence 5554 578899887655554
No 125
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=92.70 E-value=0.52 Score=46.00 Aligned_cols=85 Identities=18% Similarity=0.135 Sum_probs=72.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+++.|++.|.++-|+| .+++++-.++++.+.+...+ +++|-+++ +|+.--++..+..|-
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK--RVPVIAGTGSNNTHASIDLTKKAT 104 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CceEEeCCCCCCHHHHHHHHHHHH
Confidence 3688999999999999999999999999998 48899999999999887654 36666654 688888999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=+..
T Consensus 105 ~~Gadavlv~~ 115 (301)
T 1xky_A 105 EVGVDAVMLVA 115 (301)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEEcC
Confidence 99999986644
No 126
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=92.63 E-value=0.7 Score=44.30 Aligned_cols=153 Identities=14% Similarity=0.151 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHhHcCCCEE-EEccCCC----------------ChhHHHHHHHHHHHhcccccccCCccceEeeeccc-c
Q 013498 100 SKEKLDIARQLAKLGVDII-EAGFPAA----------------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N 161 (442)
Q Consensus 100 ~e~kl~ia~~L~~~GV~~I-EvG~p~~----------------~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~-~ 161 (442)
.+.-..+.+.+.+.|+..+ |+=.|.. .-+.+..++++++. + .|.+.--+.. +
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~---------~-kPV~lk~G~~~t 142 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKV---------E-NPVLLKRGMGNT 142 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTS---------S-SCEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHHhc---------C-CcEEEecCCCCC
Confidence 5665666666778888765 3311111 01123445555441 1 2555544443 7
Q ss_pred hhhHHHHHHHHHhCCCCEEEEee----cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccCCCCCCCHHHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFI----ATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPEDAGRSDRKFL 236 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~----~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f~~edasr~d~~~l 236 (442)
.+++..|++.+...|.+.+.+.- +.+..+. ..++. .++...++. |+. |.+.+ +-+....+++
T Consensus 143 ~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~-~~v~L----------~ai~~lk~~~~~p-Vi~d~-sH~~g~~~~v 209 (262)
T 1zco_A 143 IQELLYSAEYIMAQGNENVILCERGIRTFETATR-FTLDI----------SAVPVVKELSHLP-IIVDP-SHPAGRRSLV 209 (262)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSS-SBCCT----------THHHHHHHHBSSC-EEECS-STTTCSGGGH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcCh-hhcCH----------HHHHHHHhhhCCC-EEEEc-CCCCCccchH
Confidence 88999999988888887777654 3222110 00111 233334555 776 65544 2223345677
Q ss_pred HHHHHHHHHcCCc--EEe--------ccCcccccCHHHHHHHHHHHHHh
Q 013498 237 YEILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 237 ~~~~~~~~~~Gad--~I~--------laDT~G~~~P~~v~~li~~l~~~ 275 (442)
..+++.+...|++ .|- ++|-.=.+.|+++.++++.+++.
T Consensus 210 ~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 210 IPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp HHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHH
Confidence 7888889999999 444 56999999999999999999874
No 127
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=92.51 E-value=0.57 Score=46.42 Aligned_cols=101 Identities=16% Similarity=0.128 Sum_probs=79.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+++.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+++ .|+.--++..+..|-
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~la~~A~ 126 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG--RRTLMAGIGALRTDEAVALAKDAE 126 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999998 48999999999999887765 36666654 678888999999999
Q ss_pred HhCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 304 CAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
++||+.+=+..--.-. .+-++++..++
T Consensus 127 ~~Gadavlv~~P~Y~~----~s~~~l~~~f~ 153 (332)
T 2r8w_A 127 AAGADALLLAPVSYTP----LTQEEAYHHFA 153 (332)
T ss_dssp HHTCSEEEECCCCSSC----CCHHHHHHHHH
T ss_pred hcCCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 9999998665433221 24455554443
No 128
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=92.50 E-value=0.45 Score=44.32 Aligned_cols=169 Identities=17% Similarity=0.166 Sum_probs=88.8
Q ss_pred HHHHHHHHHhHcCCCEEEE----ccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 102 EKLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEv----G~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+-.++++.+.+.|++.|.+ |........ +.++.+++... .|.+....-.+.++++.+++ +|.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~---------ipv~v~ggI~~~~~~~~~l~----~Ga 98 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMD---------IKVELSGGIRDDDTLAAALA----TGC 98 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCS---------SEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcC---------CcEEEECCcCCHHHHHHHHH----cCC
Confidence 5678889999999999988 222122334 77888776531 24443322235667776666 488
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eEEEccCC-------CCCCCHHHHHHHHHHHHHcCCc
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPED-------AGRSDRKFLYEILGEVIKVGAT 249 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~-~V~f~~ed-------asr~d~~~l~~~~~~~~~~Gad 249 (442)
+.|.+-... +.......+..+..|.. .+.+.+.. ....+. ...+.++.+.+.|++
T Consensus 99 d~V~lg~~~----------------l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~-~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 99 TRVNLGTAA----------------LETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEGCA 161 (244)
T ss_dssp SEEEECHHH----------------HHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCC-BHHHHHHHHHHTTCC
T ss_pred CEEEECchH----------------hhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCC-CHHHHHHHHHhCCCC
Confidence 888753211 11111122233334421 12222210 001111 244667778889999
Q ss_pred EEeccCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh---CCCEE
Q 013498 250 TLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA---GARQV 310 (442)
Q Consensus 250 ~I~laDT~--G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~-ANalaAl~a---Ga~~v 310 (442)
.|.+-++. |..... -.++++.+++.+. ++|.. +=|... .|...++++ ||+.|
T Consensus 162 ~i~~~~~~~~~~~~g~-~~~~~~~i~~~~~----ipvia----~GGI~~~~d~~~~~~~~~~Gadgv 219 (244)
T 1vzw_A 162 RYVVTDIAKDGTLQGP-NLELLKNVCAATD----RPVVA----SGGVSSLDDLRAIAGLVPAGVEGA 219 (244)
T ss_dssp CEEEEEC-------CC-CHHHHHHHHHTCS----SCEEE----ESCCCSHHHHHHHHTTGGGTEEEE
T ss_pred EEEEeccCcccccCCC-CHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHhhccCCCcee
Confidence 88876532 221111 2456666776542 44443 245554 677777777 87765
No 129
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=92.48 E-value=0.088 Score=49.81 Aligned_cols=155 Identities=16% Similarity=0.145 Sum_probs=77.7
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC-CCCCCCHHHHHHHHHH
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGE 242 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-dasr~d~~~l~~~~~~ 242 (442)
.++.+++.....|.+.|.++........ ......+...+.+.+++++|++.|+. +.+-.. ...-.+++.+.++++.
T Consensus 85 ~~~~~i~~A~~lG~~~v~~~~g~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~l~~~ 161 (286)
T 3dx5_A 85 KCEQLAILANWFKTNKIRTFAGQKGSAD--FSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTLELLGE 161 (286)
T ss_dssp HHHHHHHHHHHHTCCEEEECSCSSCGGG--SCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCCCccc--CcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHHHHHHh
Confidence 4455666666678888877544321000 00002355667778888899999974 555332 1122356666666665
Q ss_pred HHHcCCcEEec-cCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH---HHH-HhCCCEEEecccc
Q 013498 243 VIKVGATTLNI-PDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI---AGA-CAGARQVEVTING 316 (442)
Q Consensus 243 ~~~~Gad~I~l-aDT~G~~~-P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal---aAl-~aGa~~vd~Tv~G 316 (442)
+ +.+.+.+ -||.=... -....+.++.+.. -...+|.+|..+-.....+ ..+ ..|... ...-
T Consensus 162 ~---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~---~~~~ 228 (286)
T 3dx5_A 162 V---DHPNLKINLDFLHIWESGADPVDSFQQLRP-------WIQHYHFKNISSADYLHVFEPNNVYAAAGNRT---GMVP 228 (286)
T ss_dssp H---CCTTEEEEEEHHHHHHTTCCHHHHHHHHGG-------GEEEEEECEESCGGGGGGGSHHHHHSTTCCCT---TEEC
T ss_pred c---CCCCeEEEeccccHhhcCCCHHHHHHHHHh-------HheEEEecCCcccccccccCccccccccCcce---eeec
Confidence 5 3333332 25431110 0112333333332 3467899987763210000 000 012111 0122
Q ss_pred cccccCcccHHHHHHHHHhc
Q 013498 317 IGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 317 lGeraGNa~lEevv~~L~~~ 336 (442)
+| .|+.+...++..|+..
T Consensus 229 ~G--~G~id~~~i~~~L~~~ 246 (286)
T 3dx5_A 229 LF--EGIVNYDEIIQEVRDT 246 (286)
T ss_dssp GG--GSSSCHHHHHHHHTTS
T ss_pred cC--CCcCCHHHHHHHHHhc
Confidence 34 4889999999999874
No 130
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=92.45 E-value=8.3 Score=37.39 Aligned_cols=197 Identities=15% Similarity=0.156 Sum_probs=120.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (442)
+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-.
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-------grvpViaGvg~~st~~ai~la~~ 102 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVD-------GKIPVIVGAGTNSTEKTLKLVKQ 102 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-------TSSCEEEECCCSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEcCCCccHHHHHHHHHH
Confidence 77888889999999999999877 4 466666665 45565555542 2357888877655444 444433
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcCC
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 248 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~Ga 248 (442)
+ +.+|++.+-+..|-. ++-|.++.++-..+.++ ..+++-+-++.+. ....+++.+.++++ +. .
T Consensus 103 A-~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~~-p 167 (306)
T 1o5k_A 103 A-EKLGANGVLVVTPYY-------NKPTQEGLYQHYKYISE---RTDLGIVVYNVPGRTGVNVLPETAARIAA---DL-K 167 (306)
T ss_dssp H-HHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHT---TCSSCEEEEECHHHHSCCCCHHHHHHHHH---HC-T
T ss_pred H-HhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hCCCCEEEEeCccccCcCCCHHHHHHHHH---hC-C
Confidence 3 456999887765532 23466666655554433 3355534555432 33567787777763 22 6
Q ss_pred cEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHH
Q 013498 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 328 (442)
Q Consensus 249 d~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEe 328 (442)
..+.+.||.|- ..++.++++.....-++ ..+ +-..++ ..+.++..|++.+ +.| .+|...+.
T Consensus 168 nIvgiKdssgd--~~~~~~~~~~~~~~~~~---f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~~ 228 (306)
T 1o5k_A 168 NVVGIXEANPD--IDQIDRTVSLTKQARSD---FMV-WSGNDD------RTFYLLCAGGDGV---ISV----VSNVAPKQ 228 (306)
T ss_dssp TEEEEEECCCC--HHHHHHHHHHHHHHCTT---CEE-EESSGG------GHHHHHHHTCCEE---EES----GGGTCHHH
T ss_pred CEEEEeCCCCC--HHHHHHHHHhcCCCCCc---EEE-EECcHH------HHHHHHHCCCCEE---Eec----HHHhhHHH
Confidence 79999999985 46777777665541112 122 334433 2456677888654 322 46777777
Q ss_pred HHHHHHh
Q 013498 329 VVMAFKC 335 (442)
Q Consensus 329 vv~~L~~ 335 (442)
++...+.
T Consensus 229 ~~~l~~a 235 (306)
T 1o5k_A 229 MVELCAE 235 (306)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665543
No 131
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=92.42 E-value=4.8 Score=37.51 Aligned_cols=161 Identities=16% Similarity=0.043 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeec----------ccchhhHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS----------RCNERDIKT 167 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~----------r~~~~dI~~ 167 (442)
.+.++..++++...+.|..-|++|. ++ .++.+.+... .|.+..+. ....++++.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~----~~---~i~~ir~~v~---------~Pvig~~k~~~~~~~~~I~~~~~~i~~ 96 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIEG----IE---NLRTVRPHLS---------VPIIGIIKRDLTGSPVRITPYLQDVDA 96 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES----HH---HHHHHGGGCC---------SCEEEECBCCCSSCCCCBSCSHHHHHH
T ss_pred CCcchHHHHHHHHHHCCCcEEEECC----HH---HHHHHHHhcC---------CCEEEEEeecCCCCceEeCccHHHHHH
Confidence 3678899999999999999999963 33 4555544321 13221111 112345665
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
++++ |++.|.+-... ..++ +.+.+++++++++|+. +...+ .+.+ .++.+.++|
T Consensus 97 ~~~a----Gad~I~l~~~~---------~~~p----~~l~~~i~~~~~~g~~-v~~~v-----~t~e----ea~~a~~~G 149 (229)
T 3q58_A 97 LAQA----GADIIAFDASF---------RSRP----VDIDSLLTRIRLHGLL-AMADC-----STVN----EGISCHQKG 149 (229)
T ss_dssp HHHH----TCSEEEEECCS---------SCCS----SCHHHHHHHHHHTTCE-EEEEC-----SSHH----HHHHHHHTT
T ss_pred HHHc----CCCEEEECccc---------cCCh----HHHHHHHHHHHHCCCE-EEEec-----CCHH----HHHHHHhCC
Confidence 5554 89987543221 1111 2345678888888874 55433 2333 356677899
Q ss_pred CcEEec--cC-ccc--ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEe
Q 013498 248 ATTLNI--PD-TVG--ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEV 312 (442)
Q Consensus 248 ad~I~l--aD-T~G--~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd~ 312 (442)
+|.|.+ -+ |.+ ...| -.++++.+++. + +++-.= -|.. ..+...++++||+.|-+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~--~~~li~~l~~~--~---ipvIA~----GGI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 150 IEFIGTTLSGYTGPITPVEP--DLAMVTQLSHA--G---CRVIAE----GRYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp CSEEECTTTTSSSSCCCSSC--CHHHHHHHHTT--T---CCEEEE----SSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCEEEecCccCCCCCcCCCC--CHHHHHHHHHc--C---CCEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 999953 21 111 1122 13566777653 2 333322 3443 56778888889988743
No 132
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=92.37 E-value=0.56 Score=45.46 Aligned_cols=81 Identities=19% Similarity=0.108 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHHhC
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGACAG 306 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl~aG 306 (442)
.|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-++|
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK--RIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998 48899999999999887654 35666655 678888999999999999
Q ss_pred CCEEEec
Q 013498 307 ARQVEVT 313 (442)
Q Consensus 307 a~~vd~T 313 (442)
|+.+=..
T Consensus 97 adavlv~ 103 (291)
T 3a5f_A 97 VDGLLVI 103 (291)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9997654
No 133
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=92.33 E-value=0.62 Score=45.54 Aligned_cols=84 Identities=15% Similarity=0.117 Sum_probs=74.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
..+.|.+-+.++++.+.+.|++.|.++=|+|= ++.++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK--NRLLLAGSGCESTQATVEMTVSMA 106 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT--TSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999995 8999999999999998765 47777776 789999999999999
Q ss_pred HhCCCEEEec
Q 013498 304 CAGARQVEVT 313 (442)
Q Consensus 304 ~aGa~~vd~T 313 (442)
++||+.+=+.
T Consensus 107 ~~Gadavlv~ 116 (307)
T 3s5o_A 107 QVGADAAMVV 116 (307)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 9999998764
No 134
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=92.30 E-value=0.68 Score=44.88 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=73.6
Q ss_pred CCCCCHHHHHHHHHHHHH-cCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIK-VGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAG 302 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~-~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaA 302 (442)
.++.|.+-+.++++.+.+ .|++.|.++-|+|= +++++-.++++.+.+...+ .++|-+|+ +|+.--++..+..|
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD--QIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCHHHHHHHHHHH
Confidence 368899999999999999 99999999999986 8999999999999887655 46666655 77888899999999
Q ss_pred HHhCCCEEEeccc
Q 013498 303 ACAGARQVEVTIN 315 (442)
Q Consensus 303 l~aGa~~vd~Tv~ 315 (442)
-++||+.+=...-
T Consensus 96 ~~~Gadavlv~~P 108 (293)
T 1f6k_A 96 TELGYDCLSAVTP 108 (293)
T ss_dssp HHHTCSEEEEECC
T ss_pred HhcCCCEEEECCC
Confidence 9999999866433
No 135
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.21 E-value=7.4 Score=36.24 Aligned_cols=160 Identities=15% Similarity=0.053 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-----------cchhhHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-----------CNERDIK 166 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-----------~~~~dI~ 166 (442)
.+.++..++++...+.|...|++|. + +.++.+.+... .|.+ +..| ...++++
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~----~---~~i~~ir~~v~---------~Pvi-g~~k~d~~~~~~~I~~~~~~i~ 95 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRIEG----I---DNLRMTRSLVS---------VPII-GIIKRDLDESPVRITPFLDDVD 95 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES----H---HHHHHHHTTCC---------SCEE-EECBCCCSSCCCCBSCSHHHHH
T ss_pred CCcchHHHHHHHHHHCCCeEEEECC----H---HHHHHHHHhcC---------CCEE-EEEeecCCCcceEeCccHHHHH
Confidence 3578899999999999999999963 3 34555554321 1322 2111 1234565
Q ss_pred HHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHc
Q 013498 167 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 167 ~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~ 246 (442)
.++++ |++.|.+-... ..++ +.+.+++++++++|+. +...+ .+.+ .++.+.++
T Consensus 96 ~~~~~----Gad~V~l~~~~---------~~~p----~~l~~~i~~~~~~g~~-v~~~v-----~t~e----ea~~a~~~ 148 (232)
T 3igs_A 96 ALAQA----GAAIIAVDGTA---------RQRP----VAVEALLARIHHHHLL-TMADC-----SSVD----DGLACQRL 148 (232)
T ss_dssp HHHHH----TCSEEEEECCS---------SCCS----SCHHHHHHHHHHTTCE-EEEEC-----CSHH----HHHHHHHT
T ss_pred HHHHc----CCCEEEECccc---------cCCH----HHHHHHHHHHHHCCCE-EEEeC-----CCHH----HHHHHHhC
Confidence 55554 89987553321 0111 2345678888888874 54433 2333 45677789
Q ss_pred CCcEEec--cC--ccc-ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEe
Q 013498 247 GATTLNI--PD--TVG-ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEV 312 (442)
Q Consensus 247 Gad~I~l--aD--T~G-~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd~ 312 (442)
|+|.|.+ -+ +.+ ...| -.++++.+++. + +|+-.= -|.. ..+...++++||+.|-+
T Consensus 149 Gad~Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~---ipvIA~----GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 149 GADIIGTTMSGYTTPDTPEEP--DLPLVKALHDA--G---CRVIAE----GRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp TCSEEECTTTTSSSSSCCSSC--CHHHHHHHHHT--T---CCEEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEcCccCCCCCCCCCC--CHHHHHHHHhc--C---CcEEEE----CCCCCHHHHHHHHHcCCCEEEE
Confidence 9999953 21 111 1112 23566666664 2 233321 3443 57788888999998743
No 136
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.20 E-value=0.49 Score=45.93 Aligned_cols=99 Identities=13% Similarity=0.116 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHHh
Q 013498 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGACA 305 (442)
Q Consensus 230 r~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl~a 305 (442)
..|.+-+.++++.+++.|++.|.++=|+|= ++.++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-++
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK--RVPVIAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccHHHHHHHHHHHHHc
Confidence 889999999999999999999999999985 7789999999999887654 47788887 79999999999999999
Q ss_pred CCCEEEecccccccccCcccHHHHHHHHH
Q 013498 306 GARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 306 Ga~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
||+.+=...--.-. ++-++++..++
T Consensus 97 Gadavlv~~P~y~~----~~~~~l~~~f~ 121 (292)
T 3daq_A 97 GADAIMLITPYYNK----TNQRGLVKHFE 121 (292)
T ss_dssp TCSEEEEECCCSSC----CCHHHHHHHHH
T ss_pred CCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 99998765433222 23455555443
No 137
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=92.16 E-value=0.82 Score=44.78 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+++.|++.|.++=|+|= ++.++-.++++.+.+.. + .++|-+++ +|+..-++..+..|-
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g--rvpViaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K--SMQVIVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T--TSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999985 89999999999999888 4 47888877 799999999999999
Q ss_pred HhCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 304 CAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
++||+.+=+ +...-. .+-|+++..++
T Consensus 100 ~~Gadavlv-~~P~~~----~s~~~l~~~f~ 125 (313)
T 3dz1_A 100 DAGAAGVMI-APPPSL----RTDEQITTYFR 125 (313)
T ss_dssp HHTCSEEEE-CCCTTC----CSHHHHHHHHH
T ss_pred HcCCCEEEE-CCCCCC----CCHHHHHHHHH
Confidence 999999866 333321 34555555544
No 138
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=92.16 E-value=9 Score=37.14 Aligned_cols=197 Identities=9% Similarity=0.041 Sum_probs=117.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHHH-HHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFE-AVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~e-~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.||+-|=+ | ++..+.+|.. .++...+... +.+|.|.+.+-.+.++ |+.+-
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 103 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMP-------KNRLLLAGSGCESTQATVEMTV 103 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSC-------TTSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888899999999999998866 3 4555666643 5555555432 3457788776544443 55543
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. ...+|++.+-+..|-.- +-+.|.++.++-....++ ..++.-+-++... ....+++.+.+++ +.
T Consensus 104 ~-A~~~Gadavlv~~P~y~-----~~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 169 (307)
T 3s5o_A 104 S-MAQVGADAAMVVTPCYY-----RGRMSSAALIHHYTKVAD---LSPIPVVLYSVPANTGLDLPVDAVVTLS----QH- 169 (307)
T ss_dssp H-HHHTTCSEEEEECCCTT-----GGGCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHH----TS-
T ss_pred H-HHHcCCCEEEEcCCCcC-----CCCCCHHHHHHHHHHHHh---hcCCCEEEEeCCcccCCCCCHHHHHHHh----cC-
Confidence 3 35679998877655421 112466777766655544 3455545555532 3356777776664 33
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++... ++ +..+ +-.+++ ..+.++..|++.+ +.| .+|...+
T Consensus 170 pnIvgiKdssgd--~~~~~~~~~~~~---~~--~f~v-~~G~d~------~~l~~l~~G~~G~---is~----~an~~P~ 228 (307)
T 3s5o_A 170 PNIVGMXDSGGD--VTRIGLIVHKTR---KQ--DFQV-LAGSAG------FLMASYALGAVGG---VCA----LANVLGA 228 (307)
T ss_dssp TTEEEEEECSCC--HHHHHHHHHHTT---TS--SCEE-EESSGG------GHHHHHHHTCCEE---ECG----GGGTCHH
T ss_pred CCEEEEEcCCCC--HHHHHHHHHhcc---CC--CeEE-EeCcHH------HHHHHHHcCCCEE---Eec----hhhhhHH
Confidence 589999999884 355555544321 11 1222 444443 2567888898643 333 4677777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 229 ~~~~l~~a 236 (307)
T 3s5o_A 229 QVCQLERL 236 (307)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665543
No 139
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=92.13 E-value=0.68 Score=46.48 Aligned_cols=117 Identities=19% Similarity=0.166 Sum_probs=87.8
Q ss_pred HHHcCCCeEEEccCC-CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 013498 213 ARSLGCDDVEFSPED-AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC 288 (442)
Q Consensus 213 ar~~G~~~V~f~~ed-asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~ 288 (442)
.+-.|+-...+++-+ .++.|.+-+.++++.+++.|++.|.++=|+| .++.++-.++++.+.+...+ .++|-+++
T Consensus 58 ~~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGv 135 (360)
T 4dpp_A 58 IKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG--SIKVIGNT 135 (360)
T ss_dssp HHTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEEC
T ss_pred cccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC--CCeEEEec
Confidence 344565211234432 4679999999999999999999999999998 57899999999998887765 47777766
Q ss_pred -cCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHh
Q 013498 289 -QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (442)
Q Consensus 289 -HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~ 335 (442)
+|+.--++..+..|-++||+.+=+..--.. ..+-|+++..++.
T Consensus 136 g~~st~eai~la~~A~~~Gadavlvv~PyY~----k~sq~gl~~hf~~ 179 (360)
T 4dpp_A 136 GSNSTREAIHATEQGFAVGMHAALHINPYYG----KTSIEGLIAHFQS 179 (360)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECCCSS----CCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC----CCCHHHHHHHHHH
Confidence 689999999999999999999866433221 1355666666554
No 140
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.04 E-value=0.78 Score=44.75 Aligned_cols=86 Identities=21% Similarity=0.205 Sum_probs=73.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+++.|++.|.++=|+| .+++++-.++++.+.+...+ .++|-++. +|+.--++..+..|-
T Consensus 31 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD--RAKLIAGVGTNNTRTSVELAEAAA 108 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEecCCCCCHHHHHHHHHHHH
Confidence 3688999999999999999999999999998 58899999999999887654 36666655 688889999999999
Q ss_pred HhCCCEEEeccc
Q 013498 304 CAGARQVEVTIN 315 (442)
Q Consensus 304 ~aGa~~vd~Tv~ 315 (442)
++||+.+=+.--
T Consensus 109 ~~Gadavlv~~P 120 (304)
T 3cpr_A 109 SAGADGLLVVTP 120 (304)
T ss_dssp HTTCSEEEEECC
T ss_pred hcCCCEEEECCC
Confidence 999999866443
No 141
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.97 E-value=2.6 Score=41.13 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v 265 (442)
.|.++++..+....+. .... |...++.. .-+++.+.+.++.+.++|+..|.|-|.++ ....+++
T Consensus 66 vt~~em~~~~~~I~r~---~~~P-viaD~d~G-yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~ 140 (298)
T 3eoo_A 66 STMDDVLVDANRITNA---TNLP-LLVDIDTG-WGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEM 140 (298)
T ss_dssp CCHHHHHHHHHHHHHH---CCSC-EEEECTTC-SSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhh---cCCe-EEEECCCC-CCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHH
Confidence 4678887776666543 3454 77777654 45899999999999999999999999986 3455667
Q ss_pred HHHHHHHHHhCCCCcceeEEEeecCC----cchHHHHHHHHHHhCCCEEE
Q 013498 266 GKLIADIKANTPGIENVVISTHCQND----LGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 266 ~~li~~l~~~~p~~~~v~i~~H~HND----lGLA~ANalaAl~aGa~~vd 311 (442)
.+.|++.++.-.+. +..|-.-+-.- +--|+.-+.+..+||||.|=
T Consensus 141 ~~ri~Aa~~A~~~~-~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if 189 (298)
T 3eoo_A 141 VDRIKAAVDARTDE-TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIF 189 (298)
T ss_dssp HHHHHHHHHHCSST-TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhccCC-CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEE
Confidence 77777766654221 24444443322 22266777788899999873
No 142
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=91.96 E-value=1.6 Score=40.62 Aligned_cols=195 Identities=14% Similarity=0.142 Sum_probs=101.4
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCCC----ChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
++-.++++.+.+.|++.|.+--+.. ....++.++.+++.. -.|.+.+-.-.+.++++.++++ |
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~---------~iPvi~~Ggi~~~~~~~~~~~~----G 97 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERV---------FIPLTVGGGVRSLEDARKLLLS----G 97 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC---------CSCEEEESSCCSHHHHHHHHHH----T
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhC---------CCCEEEECCcCCHHHHHHHHHc----C
Confidence 4568899999999999887732221 123456667666532 1344443222356778877775 7
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EEEcc---------C-CCC-CCCHHHHHHHHHHH
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEFSP---------E-DAG-RSDRKFLYEILGEV 243 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~--V~f~~---------e-das-r~d~~~l~~~~~~~ 243 (442)
++.|++-.. .+ . .+ +.+.++.+. .|.+. +.+.+ + +.. ..+.....+.++.+
T Consensus 98 ad~V~lg~~--~l--~-----~p----~~~~~~~~~---~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 161 (252)
T 1ka9_F 98 ADKVSVNSA--AV--R-----RP----ELIRELADH---FGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKG 161 (252)
T ss_dssp CSEEEECHH--HH--H-----CT----HHHHHHHHH---HCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEChH--HH--h-----Cc----HHHHHHHHH---cCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHH
Confidence 888876321 11 0 00 112223222 22111 22221 0 000 00001234566777
Q ss_pred HHcCCcEEeccCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEecccccccc
Q 013498 244 IKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGER 320 (442)
Q Consensus 244 ~~~Gad~I~laDT--~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd~Tv~GlGer 320 (442)
.+.|++.|.+.++ .|..... -.++++.+++.++ +|+-.- -|.. ..+....+++||+.|=+ |=+=-
T Consensus 162 ~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~~----ipvia~----GGI~~~~d~~~~~~~Gadgv~v---gsal~ 229 (252)
T 1ka9_F 162 VELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAVG----VPVIAS----GGAGRMEHFLEAFQAGAEAALA---ASVFH 229 (252)
T ss_dssp HHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHCS----SCEEEE----SCCCSHHHHHHHHHTTCSEEEE---SHHHH
T ss_pred HHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHcC----CCEEEe----CCCCCHHHHHHHHHCCCHHHHH---HHHHH
Confidence 7889998887643 3443221 1566777777652 333332 3444 36777777889887632 11111
Q ss_pred cCcccHHHHHHHHHhc
Q 013498 321 AGNASLEEVVMAFKCR 336 (442)
Q Consensus 321 aGNa~lEevv~~L~~~ 336 (442)
.+.-+.+++...|...
T Consensus 230 ~~~~~~~~~~~~l~~~ 245 (252)
T 1ka9_F 230 FGEIPIPKLKRYLAEK 245 (252)
T ss_dssp TTSSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHC
Confidence 1334777777777665
No 143
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.96 E-value=3.2 Score=40.67 Aligned_cols=131 Identities=17% Similarity=0.063 Sum_probs=86.5
Q ss_pred hCCCCEEEEee-cCChHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 174 YAKRPRIHTFI-ATSGIHMEHK-LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 174 ~~g~~~v~i~~-~~Sd~h~~~~-l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
.+|++.|.+.. +++-.+=..- .-.|.++.+..++..++-+ ... |...++.. .-+++.+.+.++.+.++|+..|
T Consensus 47 ~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~p-viaD~d~G-yg~~~~v~~~v~~l~~aGaagv 121 (305)
T 3ih1_A 47 NTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT---DLP-VLVDIDTG-FGGVLNVARTAVEMVEAKVAAV 121 (305)
T ss_dssp HTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH---CCC-EEEECTTC-SSSHHHHHHHHHHHHHTTCSEE
T ss_pred HcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc---CCC-EEEECCCC-CCCHHHHHHHHHHHHHhCCcEE
Confidence 46888766543 2221110000 1246888888777665543 344 77777654 4578889999999999999999
Q ss_pred eccCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeec----CCcchHHHHHHHHHHhCCCEEEe
Q 013498 252 NIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 252 ~laDT~G-----------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~H----NDlGLA~ANalaAl~aGa~~vd~ 312 (442)
.|-|.++ ....+++.+.|+++++.-++ ..|-.-+- +++--++.-+.+..+|||+.|=.
T Consensus 122 ~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~---~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 122 QIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPS---LYIVARTDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp EEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTT---SEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCC---eEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE
Confidence 9999874 34557888888888887332 33433332 22445778888899999998743
No 144
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=91.95 E-value=0.58 Score=45.85 Aligned_cols=85 Identities=18% Similarity=0.138 Sum_probs=74.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEe-ecCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTH-CQNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H-~HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+++.|++.|.++=|+|= +++++-.++++.+.+...+ +++|-+| .+|+.--++..+..|-
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG--RVPVIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEecCCchHHHHHHHHHHHH
Confidence 46789999999999999999999999999985 8899999999999887654 4778888 4799999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=+.-
T Consensus 101 ~~Gadavlv~~ 111 (309)
T 3fkr_A 101 QLGAAMVMAMP 111 (309)
T ss_dssp HTTCSEEEECC
T ss_pred HcCCCEEEEcC
Confidence 99999987653
No 145
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.95 E-value=1.6 Score=42.74 Aligned_cols=205 Identities=13% Similarity=0.086 Sum_probs=118.7
Q ss_pred HHHHhHcCCCEEEEcc----------CCCC----hhHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 107 ARQLAKLGVDIIEAGF----------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~----------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
++.++++|++.|=+|. |... .+....++.+++... .|.++ |++ +...+.+.
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~---------~PviaD~d~Gyg--~~~~v~~~ 103 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATN---------LPLLVDIDTGWG--GAFNIART 103 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCC---------SCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcC---------CeEEEECCCCCC--CHHHHHHH
Confidence 5667888999998852 3221 122456666665421 13332 343 55566566
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~ 244 (442)
.+.+..+|+..|++-..+.+- |+..+-=.+.++.+++++.+++..+ |.+.+...=.|+. ....+..++-++...
T Consensus 104 v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~--~~~~~I~ARTDa~~~~gldeai~Ra~ay~ 181 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART--DETFVIMARTDAAAAEGIDAAIERAIAYV 181 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS--STTSEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc--CCCeEEEEeehhhhhcCHHHHHHHHHhhH
Confidence 666667899999998776532 1110001367888888776665433 3331222111221 112345566667788
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcc
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa 324 (442)
++|||.|.+. |.-+++++.++.+.+. .| +.+-+-..+...+ -+.-+--+.|++.|-..... =|+-+.
T Consensus 182 ~AGAD~if~~---~~~~~ee~~~~~~~~~--~P----l~~n~~~~g~tp~--~~~~eL~~lGv~~v~~~~~~--~raa~~ 248 (298)
T 3eoo_A 182 EAGADMIFPE---AMKTLDDYRRFKEAVK--VP----ILANLTEFGSTPL--FTLDELKGANVDIALYCCGA--YRAMNK 248 (298)
T ss_dssp HTTCSEEEEC---CCCSHHHHHHHHHHHC--SC----BEEECCTTSSSCC--CCHHHHHHTTCCEEEECSHH--HHHHHH
T ss_pred hcCCCEEEeC---CCCCHHHHHHHHHHcC--CC----eEEEeccCCCCCC--CCHHHHHHcCCeEEEEchHH--HHHHHH
Confidence 8999999885 3457888888888774 33 2222222221111 12344556799998655443 477888
Q ss_pred cHHHHHHHHHhcc
Q 013498 325 SLEEVVMAFKCRG 337 (442)
Q Consensus 325 ~lEevv~~L~~~g 337 (442)
++++++..|...|
T Consensus 249 a~~~~~~~i~~~g 261 (298)
T 3eoo_A 249 AALNFYETVRRDG 261 (298)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC
Confidence 8999988887765
No 146
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=91.91 E-value=1.3 Score=42.14 Aligned_cols=150 Identities=13% Similarity=0.097 Sum_probs=90.8
Q ss_pred HHHHHHhHcC--CCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee-ec-cc-chhhHHHHHHHHHhCCCCE
Q 013498 105 DIARQLAKLG--VDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LS-RC-NERDIKTAWEAVKYAKRPR 179 (442)
Q Consensus 105 ~ia~~L~~~G--V~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~-~~-r~-~~~dI~~a~e~l~~~g~~~ 179 (442)
.+-+.|.-+| ||.+=+||..+.-.+.+.+++..+..... +..+..-| |. .+ ....++.-++..+..|.+.
T Consensus 27 ~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~-----gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~ 101 (251)
T 1qwg_A 27 FVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDW-----GIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEA 101 (251)
T ss_dssp HHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTT-----TCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHc-----CCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCE
Confidence 3444555556 89999998654433344555554443211 11111111 00 00 1124455555556669999
Q ss_pred EEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--EccCC---CCCCCHHHHHHHHHHHHHcCCcEE---
Q 013498 180 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FSPED---AGRSDRKFLYEILGEVIKVGATTL--- 251 (442)
Q Consensus 180 v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~~ed---asr~d~~~l~~~~~~~~~~Gad~I--- 251 (442)
|.++..+-+ ++.+ .-.++|+.+++.|+. |- ++--+ ....+++.+.+.++.-.++||+.|
T Consensus 102 iEiS~G~i~--------l~~~----~~~~~I~~~~~~G~~-v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiE 168 (251)
T 1qwg_A 102 VEISDGSSD--------ISLE----ERNNAIKRAKDNGFM-VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIE 168 (251)
T ss_dssp EEECCSSSC--------CCHH----HHHHHHHHHHHTTCE-EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred EEECCCccc--------CCHH----HHHHHHHHHHHCCCE-EeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEe
Confidence 999766543 3333 345789999999985 53 34322 356789999999999999999865
Q ss_pred --------eccCcccccCHHHHHHHHHHH
Q 013498 252 --------NIPDTVGITMPTEFGKLIADI 272 (442)
Q Consensus 252 --------~laDT~G~~~P~~v~~li~~l 272 (442)
.|+|..|......+.++++.+
T Consensus 169 arEsG~~iGi~~~~g~~r~d~v~~i~~~l 197 (251)
T 1qwg_A 169 GRESGKGKGLFDKEGKVKENELDVLAKNV 197 (251)
T ss_dssp CTTTCCSSTTBCTTSCBCHHHHHHHHTTS
T ss_pred eecccCCcccCCCCCCCcHHHHHHHHHhC
Confidence 566677777777766655543
No 147
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=91.87 E-value=0.67 Score=44.97 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=72.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHH
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGAC 304 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl~ 304 (442)
++.|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+|+ +|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG--RIKVIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999999999998 48899999999999887654 36666665 6788889999999999
Q ss_pred hCCCEEEecc
Q 013498 305 AGARQVEVTI 314 (442)
Q Consensus 305 aGa~~vd~Tv 314 (442)
+||+.+=...
T Consensus 94 ~Gadavlv~~ 103 (294)
T 2ehh_A 94 VGADGALVVV 103 (294)
T ss_dssp TTCSEEEEEC
T ss_pred cCCCEEEECC
Confidence 9999986643
No 148
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=91.83 E-value=0.7 Score=45.37 Aligned_cols=102 Identities=13% Similarity=0.064 Sum_probs=80.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
.++.|.+-+.++++.+++.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-++.-++.--++..+..|-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g--rvpViaGvg~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG--RALVVAGIGYATSTAIELGNAAKA 104 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEEeCcCHHHHHHHHHHHHh
Confidence 36899999999999999999999999999985 7899999999999887765 467777765588888888899999
Q ss_pred hCCCEEEecccccccccCcccHHHHHHHHHh
Q 013498 305 AGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~ 335 (442)
+||+.+=+..--. - ..+-|+++..++.
T Consensus 105 ~Gadavlv~~P~y-~---~~s~~~l~~~f~~ 131 (316)
T 3e96_A 105 AGADAVMIHMPIH-P---YVTAGGVYAYFRD 131 (316)
T ss_dssp HTCSEEEECCCCC-S---CCCHHHHHHHHHH
T ss_pred cCCCEEEEcCCCC-C---CCCHHHHHHHHHH
Confidence 9999987643222 1 1355666655543
No 149
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=91.82 E-value=11 Score=37.18 Aligned_cols=196 Identities=10% Similarity=0.066 Sum_probs=117.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-------grvpViaGvg~~st~eai~la~ 123 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILR-------GRRTLMAGIGALRTDEAVALAK 123 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 478888899999999999999876 4 455566664 45565555542 2357888887655444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. ...+|++.+-+..|-. ++.+.+++++-..+.++ ..++.-+-++.+. ....+++.+.++++ -
T Consensus 124 ~-A~~~Gadavlv~~P~Y-------~~~s~~~l~~~f~~VA~---a~~lPiilYn~P~~tg~~l~~e~~~~La~-----~ 187 (332)
T 2r8w_A 124 D-AEAAGADALLLAPVSY-------TPLTQEEAYHHFAAVAG---ATALPLAIYNNPTTTRFTFSDELLVRLAY-----I 187 (332)
T ss_dssp H-HHHHTCSEEEECCCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEECCHHHHCCCCCHHHHHHHHT-----S
T ss_pred H-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHHc-----C
Confidence 3 3456999887665532 24577776666655544 3355545555542 33467777776652 2
Q ss_pred CcEEeccCcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCccc
Q 013498 248 ATTLNIPDTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 325 (442)
Q Consensus 248 ad~I~laDT~G~~~--P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~ 325 (442)
...+.+.|+.|-.. ..++.+++ +..++ + +.+=+=+| ...+.++..|++.+ +.| .+|..
T Consensus 188 pnIvgiKdssgd~~~~~~~~~~l~----~~~~~--~--f~v~~G~D-----~~~l~~l~~G~~G~---is~----~anv~ 247 (332)
T 2r8w_A 188 PNIRAIKMPLPADADYAGELARLR----PKLSD--D--FAIGYSGD-----WGCTDATLAGGDTW---YSV----VAGLL 247 (332)
T ss_dssp TTEEEEEECCCTTCCHHHHHHHHT----TTSCT--T--CEEEECCH-----HHHHHHHHTTCSEE---EES----GGGTC
T ss_pred CCEEEEEeCCCCchhHHHHHHHHH----HhcCC--C--EEEEeCch-----HHHHHHHHCCCCEE---EeC----HHHhC
Confidence 67999999997522 34444443 33432 1 22222222 35678888998754 222 35676
Q ss_pred HHHHHHHHHh
Q 013498 326 LEEVVMAFKC 335 (442)
Q Consensus 326 lEevv~~L~~ 335 (442)
.+.++...+.
T Consensus 248 P~~~~~l~~a 257 (332)
T 2r8w_A 248 PVPALQLMRA 257 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7766665543
No 150
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=91.74 E-value=10 Score=36.96 Aligned_cols=217 Identities=15% Similarity=0.130 Sum_probs=126.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|.+.+..+.++ |+.+-
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 100 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVG-------PDFPIMAGVGAHSTRQVLEHIN 100 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHC-------TTSCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHH
Confidence 478888899999999999998766 4 355566664 45555555542 3457888877544444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhC--CCHHHHHHHHHHHHHHHHHcCCCeEEEccCC---CCCCCHHHHHHHHHHHH
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLR--KTKQQVVEIARSMVKFARSLGCDDVEFSPED---AGRSDRKFLYEILGEVI 244 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~--~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed---asr~d~~~l~~~~~~~~ 244 (442)
. ...+|++.+-+..|.. ++ .+.++.++-....++. .++.-+-++... ....+++.+.++++.
T Consensus 101 ~-a~~~Gadavlv~~P~y-------~~kp~~~~~l~~~f~~ia~a---~~lPiilYn~P~~t~g~~l~~~~~~~La~~-- 167 (318)
T 3qfe_A 101 D-ASVAGANYVLVLPPAY-------FGKATTPPVIKSFFDDVSCQ---SPLPVVIYNFPGVCNGIDLDSDMITTIARK-- 167 (318)
T ss_dssp H-HHHHTCSEEEECCCCC----------CCCHHHHHHHHHHHHHH---CSSCEEEEECCC----CCCCHHHHHHHHHH--
T ss_pred H-HHHcCCCEEEEeCCcc-------cCCCCCHHHHHHHHHHHHhh---CCCCEEEEeCCcccCCCCCCHHHHHHHHhh--
Confidence 3 3456999887655522 22 3566666655555443 355545566653 234567766665532
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEE-eecCCcchHHHHHHHHHHhCCCEEEecccccccccCc
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN 323 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~-H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGN 323 (442)
. ...+.+.||.|- ..++.++++.+. ++ + +.+ -.++++ .+.++..|++.+ +.+ .+|
T Consensus 168 -~-pnIvgiKdssgd--~~~~~~~~~~~~---~~--~--f~v~~G~d~~------~l~~l~~G~~G~---is~----~an 223 (318)
T 3qfe_A 168 -N-PNVVGVKLTCAS--VGKITRLAATLP---PA--A--FSVFGGQSDF------LIGGLSVGSAGC---IAA----FAN 223 (318)
T ss_dssp -C-TTEEEEEESSCC--HHHHHHHHHHSC---GG--G--CEEEESCGGG------HHHHHHTTCCEE---ECG----GGG
T ss_pred -C-CCEEEEEeCCCC--HHHHHHHHHhcC---CC--C--EEEEEecHHH------HHHHHHCCCCEE---Eec----HHH
Confidence 3 579999999883 455555554332 11 1 333 333332 357788898754 332 457
Q ss_pred ccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCC
Q 013498 324 ASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGL 366 (442)
Q Consensus 324 a~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~ 366 (442)
...+.++...+... .=|.+.-.++-+.+..+...
T Consensus 224 ~~P~~~~~l~~a~~---------~Gd~~~A~~l~~~l~~~~~~ 257 (318)
T 3qfe_A 224 VFPKTVSKIYELYK---------AGKVDQAMELHRKAALAESP 257 (318)
T ss_dssp TCHHHHHHHHHHHH---------TTCHHHHHHHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHHH---------CCCHHHHHHHHHHHHHHHHH
Confidence 77777766555421 12556666666555554443
No 151
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=91.73 E-value=2 Score=42.09 Aligned_cols=189 Identities=16% Similarity=0.100 Sum_probs=114.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChh-HHHHHHHHHHHhcccccccCCccceEe--eecccchhhHHHHHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVIC--GLSRCNERDIKTAWEAVK 173 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d~e~v~~l~~~~~~~~~~~~~l~~~i~--~~~r~~~~dI~~a~e~l~ 173 (442)
..+.+....+++.-.+.+-+.|=-.+|..... ..+.+..+.+..... . .-+|... .++. ..+.+..++++
T Consensus 24 v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~---~-~~VPValHLDHg~-~~e~~~~ai~~-- 96 (307)
T 3n9r_A 24 FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCER---Y-PHIPVALHLDHGT-TFESCEKAVKA-- 96 (307)
T ss_dssp CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHH---S-TTSCEEEEEEEEC-SHHHHHHHHHH--
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHh---c-CCCcEEEECCCCC-CHHHHHHHHHh--
Confidence 35789999999999999999764434321110 112333322211100 0 0134332 3332 45667777765
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE--Ec----cCC--------CCCCCHHHHHHH
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE--FS----PED--------AGRSDRKFLYEI 239 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~--f~----~ed--------asr~d~~~l~~~ 239 (442)
|...|.+ -.| ..+.+|+++..++.+++|+..|.. |+ ++ .|| ...+||+...++
T Consensus 97 --GFtSVMi--DgS--------~~p~eeNi~~Tk~vv~~ah~~gvs-VEaELG~igG~Ed~~~~~~~~~~yT~Peea~~F 163 (307)
T 3n9r_A 97 --GFTSVMI--DAS--------HHAFEENLELTSKVVKMAHNAGVS-VEAELGRLMGIEDNISVDEKDAVLVNPKEAEQF 163 (307)
T ss_dssp --TCSEEEE--CCT--------TSCHHHHHHHHHHHHHHHHHTTCE-EEEEESCCCCC----------CCSCCHHHHHHH
T ss_pred --CCCcEEE--ECC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeeccccCCcccccccccCCCHHHHHHH
Confidence 8887654 333 247799999999999999999983 64 22 232 346899988887
Q ss_pred HHHHHHcCCcEEecc--CcccccC----HHHHHHHHHHHHHhCCCCcceeEEEeec-------------------CCcch
Q 013498 240 LGEVIKVGATTLNIP--DTVGITM----PTEFGKLIADIKANTPGIENVVISTHCQ-------------------NDLGL 294 (442)
Q Consensus 240 ~~~~~~~Gad~I~la--DT~G~~~----P~~v~~li~~l~~~~p~~~~v~i~~H~H-------------------NDlGL 294 (442)
+++ -|+|.+-++ -.=|... |.--.++++.+++. + ++||.+|.= +..|.
T Consensus 164 v~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~-~---~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~ 236 (307)
T 3n9r_A 164 VKE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL-T---NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGV 236 (307)
T ss_dssp HHH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHH-H---CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCC
T ss_pred HHH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhc-C---CCCeEEeCCCCcchHHHHHHHHhcCccCCCCCC
Confidence 654 599965554 3334432 33334555555543 3 367999973 35588
Q ss_pred HHHHHHHHHHhCCCEEEe
Q 013498 295 STANTIAGACAGARQVEV 312 (442)
Q Consensus 295 A~ANalaAl~aGa~~vd~ 312 (442)
....-..|+..|+.-|+.
T Consensus 237 p~e~i~~ai~~GV~KiNi 254 (307)
T 3n9r_A 237 PFEFLQESVKGGINKVNT 254 (307)
T ss_dssp CHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHcCceEEEe
Confidence 888888888888877754
No 152
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=91.71 E-value=0.45 Score=46.14 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+|+ +|+.--++..+..|-
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG--RIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHHHHHHHHHHHH
Confidence 3688999999999999999999999999998 48899999999999887654 35666654 678888888999999
Q ss_pred HhCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 304 CAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
++||+.+=+..--.-. .+-++++..++
T Consensus 94 ~~Gadavlv~~P~y~~----~s~~~l~~~f~ 120 (292)
T 2ojp_A 94 DSGIVGCLTVTPYYNR----PSQEGLYQHFK 120 (292)
T ss_dssp TSSCSEEEEECCCSSC----CCHHHHHHHHH
T ss_pred hcCCCEEEECCCCCCC----CCHHHHHHHHH
Confidence 9999998664433221 24455554443
No 153
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=91.64 E-value=0.71 Score=42.12 Aligned_cols=172 Identities=13% Similarity=0.055 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhHcCCCEEEEcc-----CCCChhHHHHHHHHHHHhcccccccCCccceEeeecccc-hhhHHHHHHHHH
Q 013498 100 SKEKLDIARQLAKLGVDIIEAGF-----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN-ERDIKTAWEAVK 173 (442)
Q Consensus 100 ~e~kl~ia~~L~~~GV~~IEvG~-----p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~-~~dI~~a~e~l~ 173 (442)
..+..+.++.+.+.|++.+++.. +.....-.+.++.+.+..+ .+....+.-.+ .+.++.+.++
T Consensus 15 ~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~---------~~~~v~l~v~d~~~~i~~~~~~-- 83 (220)
T 2fli_A 15 YANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSK---------LVFDCHLMVVDPERYVEAFAQA-- 83 (220)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC---------SEEEEEEESSSGGGGHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCC---------CCEEEEEeecCHHHHHHHHHHc--
Confidence 34556778888999999987753 2211111566777665421 12222222122 2357666665
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
|++.|.+.....+ ...+.++.+++.|.. +.+.+ + ..++.+.+.++ ..++|.|.+
T Consensus 84 --gad~v~vh~~~~~----------------~~~~~~~~~~~~g~~-i~~~~-~-~~t~~e~~~~~-----~~~~d~vl~ 137 (220)
T 2fli_A 84 --GADIMTIHTESTR----------------HIHGALQKIKAAGMK-AGVVI-N-PGTPATALEPL-----LDLVDQVLI 137 (220)
T ss_dssp --TCSEEEEEGGGCS----------------CHHHHHHHHHHTTSE-EEEEE-C-TTSCGGGGGGG-----TTTCSEEEE
T ss_pred --CCCEEEEccCccc----------------cHHHHHHHHHHcCCc-EEEEE-c-CCCCHHHHHHH-----HhhCCEEEE
Confidence 8999877543321 123455666777864 55554 2 23333333222 245887743
Q ss_pred cCcc-----cccCHHHHHHHHHHHHHhCCCC-cceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 254 PDTV-----GITMPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 254 aDT~-----G~~~P~~v~~li~~l~~~~p~~-~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
|++ |...+....+.++.+++..+.. .++++.+ +-|....|.-.++++||+.|.+.
T Consensus 138 -~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 138 -MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp -ESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred -EEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCCEEEEC
Confidence 333 3222222333445555432100 0133433 34555578888889999998764
No 154
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.62 E-value=2.4 Score=40.60 Aligned_cols=171 Identities=11% Similarity=0.061 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChHH-----HH------HHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEccCCCC
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGIH-----ME------HKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAG 229 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~h-----~~------~~l~~s~~e~l~~~~~~v~~ar~~G--~~~V~f~~edas 229 (442)
+.....++.+..+|+|.|.+=+|-||.. ++ -+.|.+.+..+ +.++..|+.+ .. +.+- +
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~----~~v~~ir~~~~~~P-ivlm----~ 102 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF----DIITKVRAQHPDMP-IGLL----L 102 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH----HHHHHHHHHCTTCC-EEEE----E
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH----HHHHHHHhcCCCCC-EEEE----e
Confidence 4444456667778999999988887731 11 12466755555 4556666653 33 3221 2
Q ss_pred CCCHHH---HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC
Q 013498 230 RSDRKF---LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 306 (442)
Q Consensus 230 r~d~~~---l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG 306 (442)
..++-+ +.++++.+.++|+|.+.++| +.|++..+++..++++- +.+.+=+=.+.-....-.++ +.+
T Consensus 103 Y~npv~~~g~e~f~~~~~~aGvdgvii~D----lp~ee~~~~~~~~~~~g-----l~~i~liaP~t~~eri~~i~--~~~ 171 (267)
T 3vnd_A 103 YANLVFANGIDEFYTKAQAAGVDSVLIAD----VPVEESAPFSKAAKAHG-----IAPIFIAPPNADADTLKMVS--EQG 171 (267)
T ss_dssp CHHHHHHHCHHHHHHHHHHHTCCEEEETT----SCGGGCHHHHHHHHHTT-----CEEECEECTTCCHHHHHHHH--HHC
T ss_pred cCcHHHHhhHHHHHHHHHHcCCCEEEeCC----CCHhhHHHHHHHHHHcC-----CeEEEEECCCCCHHHHHHHH--HhC
Confidence 333322 36788999999999999998 45788888888888752 22222222222222222233 334
Q ss_pred CCEEEe-cccc-cccccCcc-cHHHHHHHHHhccccccCCccCCCC-hhHHH
Q 013498 307 ARQVEV-TING-IGERAGNA-SLEEVVMAFKCRGEHILGGLYTGIN-TRHIV 354 (442)
Q Consensus 307 a~~vd~-Tv~G-lGeraGNa-~lEevv~~L~~~g~~~~~G~~tgid-l~~L~ 354 (442)
-..|-+ |+.| -|.+.+.. .+.+++..++....- ...+.-||+ .+.+.
T Consensus 172 ~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~-pv~vGfGI~~~e~~~ 222 (267)
T 3vnd_A 172 EGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAP-PPLLGFGIAEPEQVR 222 (267)
T ss_dssp CSCEEESCCCCCC--------CHHHHHHHHHTTTCC-CEEECSSCCSHHHHH
T ss_pred CCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCC-CEEEECCcCCHHHHH
Confidence 345555 6665 56666543 466777776654211 112335663 55554
No 155
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=91.61 E-value=1.2 Score=41.46 Aligned_cols=192 Identities=14% Similarity=0.121 Sum_probs=100.1
Q ss_pred HHHHHHHHhHcCCCEEEEccCCC---------ChhHHHHHHHHHHHhcccccccCCccceEeeecc-----c-c------
Q 013498 103 KLDIARQLAKLGVDIIEAGFPAA---------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-----C-N------ 161 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEvG~p~~---------~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-----~-~------ 161 (442)
-.+.++.+.++|++.||+ |+.. ++++.+.++.+.+..+ +. .++++.. + +
T Consensus 16 ~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------l~-~~~~h~~~~~~l~s~~~~r~~ 85 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASG--------GL-PAVIHASYLVNLGAEGELWEK 85 (270)
T ss_dssp HHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTT--------CC-CEEEECCTTCCTTCSSTHHHH
T ss_pred HHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcC--------Cc-eEEEecCcccCCCCCHHHHHH
Confidence 345566677789999999 4321 2345556665555422 10 1111111 0 1
Q ss_pred -hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCeEEEccC--CCCC--CCHHH
Q 013498 162 -ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVEFSPE--DAGR--SDRKF 235 (442)
Q Consensus 162 -~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar-~~G~~~V~f~~e--dasr--~d~~~ 235 (442)
.+.++.+++.....|.+.|.+..... +.+..++.+.+++++|+ +.|.. +.+-.. ..+. .+++.
T Consensus 86 ~~~~~~~~i~~a~~lGa~~vv~h~g~~----------~~~~~~~~l~~l~~~a~~~~gv~-l~lEn~~~~~~~~~~~~~~ 154 (270)
T 3aam_A 86 SVASLADDLEKAALLGVEYVVVHPGSG----------RPERVKEGALKALRLAGVRSRPV-LLVENTAGGGEKVGARFEE 154 (270)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCBS----------CHHHHHHHHHHHHHHHTCCSSSE-EEEECCCCCTTBSCCSHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCC----------CHHHHHHHHHHHHHhhcccCCCE-EEEecCCCCCCccCCCHHH
Confidence 12234445554556888776543321 11566777888888887 77863 555322 1111 37788
Q ss_pred HHHHHHHHHHcCCcEEeccCcc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 236 LYEILGEVIKVGATTLNIPDTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~-----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+.++++.+ ..| ++ -||. |.-......++++.+.+.++. +-...+|.||..+- .|.. .
T Consensus 155 ~~~l~~~v-~vg---~~-lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~--~~i~~vHl~D~~~~----------~~~~-~ 216 (270)
T 3aam_A 155 LAWLVADT-PLQ---VC-LDTCHAYAAGYDVAEDPLGVLDALDRAVGL--ERVPVVHLNDSVGG----------LGSR-V 216 (270)
T ss_dssp HHHHHTTS-SCE---EE-EEHHHHHHHTCCTTTCHHHHHHHHHHHTCG--GGCCEEECCEESSC----------TTCC-C
T ss_pred HHHHHHhC-CEE---EE-EehhhHHhccCCchhhHHHHHHHHHHhcCc--cceeEEEEecCCCc----------cccC-c
Confidence 88888766 211 22 2553 321111244555555444321 13467899886541 0111 0
Q ss_pred EecccccccccCcccHHHHHHHHHhcc
Q 013498 311 EVTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 311 d~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
|- -..+|+ |+.+ ++++..|+..+
T Consensus 217 d~-h~~~G~--G~id-~~~~~~L~~~~ 239 (270)
T 3aam_A 217 DH-HAHLLQ--GKIG-EGLKRVFLDPR 239 (270)
T ss_dssp CC-EECTTS--SSST-THHHHHHTCGG
T ss_pred cc-ccCCCC--CCcC-HHHHHHHhccC
Confidence 00 012444 8899 99999998765
No 156
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=91.60 E-value=10 Score=36.54 Aligned_cols=196 Identities=12% Similarity=0.067 Sum_probs=118.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~ 92 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-------APSRIVTGVLVDSIEDAADQSA 92 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-------CGGGEEEEECCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCccHHHHHHHHH
Confidence 478888899999999999998876 4 455566665 45555555432 3457888887655444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHc
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~-~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~ 246 (442)
. ...+|++.+-+..|-. ++ .+.++.++-....++..-.-++.-+-++.+. ....+++.+.++++ +.
T Consensus 93 ~-A~~~Gadavlv~~P~y-------~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~---~~ 161 (294)
T 3b4u_A 93 E-ALNAGARNILLAPPSY-------FKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKA---AF 161 (294)
T ss_dssp H-HHHTTCSEEEECCCCS-------SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHH---HC
T ss_pred H-HHhcCCCEEEEcCCcC-------CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHH---hC
Confidence 3 3567999887765532 23 4777766666555443200045534555432 33567787777753 22
Q ss_pred CCc-EEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCccc
Q 013498 247 GAT-TLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNAS 325 (442)
Q Consensus 247 Gad-~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~ 325 (442)
.. .+.+.||.|- ..++.+++... ++ ..+ +-..+ ...+.++..|++.+ +.| .+|..
T Consensus 162 -pn~ivgiKds~gd--~~~~~~~~~~~----~~---f~v-~~G~d------~~~l~~l~~G~~G~---is~----~~n~~ 217 (294)
T 3b4u_A 162 -PGIVTGVKDSSGN--WSHTERLLKEH----GD---LAI-LIGDE------RDLARGVRLGGQGA---ISG----VANFL 217 (294)
T ss_dssp -TTTEEEEEECCCC--HHHHHHHHHHH----TT---SEE-EECCH------HHHHHHHHTTCCEE---EES----GGGTC
T ss_pred -CCcEEEEEECCCC--HHHHHHHHHhC----CC---eEE-EEccH------HHHHHHHHCCCCEE---EeC----HHHhC
Confidence 56 8999999985 34566655443 22 122 22332 23567888998644 332 45777
Q ss_pred HHHHHHHHH
Q 013498 326 LEEVVMAFK 334 (442)
Q Consensus 326 lEevv~~L~ 334 (442)
.+.++...+
T Consensus 218 P~~~~~l~~ 226 (294)
T 3b4u_A 218 TQEVRAMAV 226 (294)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 777665543
No 157
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.59 E-value=4.3 Score=39.52 Aligned_cols=123 Identities=12% Similarity=0.064 Sum_probs=79.5
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC--CCCCHHHHHHHHH
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA--GRSDRKFLYEILG 241 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda--sr~d~~~l~~~~~ 241 (442)
.++.|++ .|.+.|.+.+-..+ ....+.++.+.++++.|++.|+. +.+..... -..|++.+...++
T Consensus 130 ~ve~Av~----~GAdaV~~~i~~Gs--------~~~~~~l~~i~~v~~~a~~~Glp-vIie~~~G~~~~~d~e~i~~aar 196 (295)
T 3glc_A 130 SMDDAVR----LNSCAVAAQVYIGS--------EYEHQSIKNIIQLVDAGMKVGMP-TMAVTGVGKDMVRDQRYFSLATR 196 (295)
T ss_dssp CHHHHHH----TTCSEEEEEECTTS--------TTHHHHHHHHHHHHHHHHTTTCC-EEEEECC----CCSHHHHHHHHH
T ss_pred HHHHHHH----CCCCEEEEEEECCC--------CcHHHHHHHHHHHHHHHHHcCCE-EEEECCCCCccCCCHHHHHHHHH
Confidence 3566665 48887766543221 23567788999999999999986 44321110 0157787888999
Q ss_pred HHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee--cCCcchHHHHHHHHHHhCCCEEEe
Q 013498 242 EVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC--QNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 242 ~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~--HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
.+.++|||.|-..=| ++. ++.+.+..+ +||-+=. +-+.--++.+.-.|+++||+.+-+
T Consensus 197 iA~elGAD~VKt~~t-----~e~----~~~vv~~~~----vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 197 IAAEMGAQIIKTYYV-----EKG----FERIVAGCP----VPIVIAGGKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp HHHHTTCSEEEEECC-----TTT----HHHHHHTCS----SCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCCEEEeCCC-----HHH----HHHHHHhCC----CcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 999999999888743 233 455555443 3444333 323445678888999999986643
No 158
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.57 E-value=2.3 Score=41.01 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc-----ccCHHHHHHHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----ITMPTEFGKLIAD 271 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G-----~~~P~~v~~li~~ 271 (442)
.|.++.+..++...+-+ ... |...++..+-.+++.+.+.++.+.++|+..|.|-|.++ ...++++.+.|+.
T Consensus 59 vt~~em~~~~~~I~~~~---~~p-viaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~a 134 (275)
T 2ze3_A 59 LTRDEMGREVEAIVRAV---AIP-VNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEA 134 (275)
T ss_dssp SCHHHHHHHHHHHHHHC---SSC-EEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhc---CCC-EEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHH
Confidence 47788887776655543 344 78888666445799999999999999999999999984 5666778888888
Q ss_pred HHHh
Q 013498 272 IKAN 275 (442)
Q Consensus 272 l~~~ 275 (442)
+++.
T Consensus 135 a~~a 138 (275)
T 2ze3_A 135 ARAA 138 (275)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8776
No 159
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.55 E-value=11 Score=36.65 Aligned_cols=192 Identities=13% Similarity=0.137 Sum_probs=115.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ ++.+-
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 104 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-------DRARVIAGAGTYDTAHSIRLAK 104 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSCHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEeCCCCCHHHHHHHHH
Confidence 478899999999999999998876 3 344555664 45565555543 2357888876555444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
....+|++.+-+..|-. ++-+.++.++-..+.++. .++.-+-++.+. ....+++.+.+++ +.
T Consensus 105 -~a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 168 (304)
T 3l21_A 105 -ACAAEGAHGLLVVTPYY-------SKPPQRGLQAHFTAVADA---TELPMLLYDIPGRSAVPIEPDTIRALA----SH- 168 (304)
T ss_dssp -HHHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHTS---CSSCEEEEECHHHHSSCCCHHHHHHHH----TS-
T ss_pred -HHHHcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---cCCCEEEEeCccccCCCCCHHHHHHHh----cC-
Confidence 33456999887765532 234666665554444333 355534555432 3456777776665 33
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.| ...++.+++. . ++ ..+ +-++++ ..+.++..|++.+ +. ..+|...+
T Consensus 169 pnIvgiKdssg--d~~~~~~~~~--~---~~---f~v-~~G~d~------~~l~~l~~Ga~G~---is----~~~n~~P~ 224 (304)
T 3l21_A 169 PNIVGVXDAKA--DLHSGAQIMA--D---TG---LAY-YSGDDA------LNLPWLRMGATGF---IS----VIAHLAAG 224 (304)
T ss_dssp TTEEEEEECSC--CHHHHHHHHH--H---HC---CEE-EESSGG------GHHHHHHHTCCEE---EE----STHHHHHH
T ss_pred CCEEEEECCCC--CHHHHHHHhc--C---CC---eEE-EeCchH------HHHHHHHcCCCEE---Ee----cHHhhhHH
Confidence 57999999998 4566666661 1 22 222 333332 2456788898754 22 24677777
Q ss_pred HHHHHHHh
Q 013498 328 EVVMAFKC 335 (442)
Q Consensus 328 evv~~L~~ 335 (442)
.++...+.
T Consensus 225 ~~~~l~~a 232 (304)
T 3l21_A 225 QLRELLSA 232 (304)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 160
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=91.54 E-value=0.84 Score=44.15 Aligned_cols=85 Identities=19% Similarity=0.111 Sum_probs=72.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHH
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGAC 304 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl~ 304 (442)
++.|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG--RVQVIAGAGSNCTEEAIELSVFAED 93 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 5789999999999999999999999999985 8899999999999887655 36666665 6788889999999999
Q ss_pred hCCCEEEeccc
Q 013498 305 AGARQVEVTIN 315 (442)
Q Consensus 305 aGa~~vd~Tv~ 315 (442)
+||+.+=..--
T Consensus 94 ~Gadavlv~~P 104 (289)
T 2yxg_A 94 VGADAVLSITP 104 (289)
T ss_dssp HTCSEEEEECC
T ss_pred cCCCEEEECCC
Confidence 99999866443
No 161
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=91.52 E-value=0.87 Score=44.66 Aligned_cols=86 Identities=12% Similarity=0.060 Sum_probs=71.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
.+..|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ +++|-++.=.+.--++..+..|-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~st~~ai~la~~A~~ 104 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG--RATVVAGIGYSVDTAIELGKSAID 104 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC--CCeEEecCCcCHHHHHHHHHHHHH
Confidence 3688999999999999999999999999998 58999999999999887654 366666653366778888889999
Q ss_pred hCCCEEEeccc
Q 013498 305 AGARQVEVTIN 315 (442)
Q Consensus 305 aGa~~vd~Tv~ 315 (442)
+||+.+=...-
T Consensus 105 ~Gadavlv~~P 115 (314)
T 3d0c_A 105 SGADCVMIHQP 115 (314)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 99999866443
No 162
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=91.49 E-value=1.4 Score=41.26 Aligned_cols=164 Identities=15% Similarity=0.156 Sum_probs=90.7
Q ss_pred HHHHHHHHhHcCCCEEEE----c-c-CCCChhHHHHHHHHHHHh-cccccccCCccceEeeecccch-hhHHHHHHHHHh
Q 013498 103 KLDIARQLAKLGVDIIEA----G-F-PAASKEDFEAVRTIAKEV-GNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKY 174 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEv----G-~-p~~~~~d~e~v~~l~~~~-~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~e~l~~ 174 (442)
-.+-++.|.++|.+.+.+ | | |..+ --.+.++.+.+.. .+. . +..-+. -.+. +-++.+.+
T Consensus 19 l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~-~G~~~v~~ir~~~~~~~-~----~dvhLm---v~~p~~~i~~~~~---- 85 (228)
T 3ovp_A 19 LGAECLRMLDSGADYLHLDVMDGHFVPNIT-FGHPVVESLRKQLGQDP-F----FDMHMM---VSKPEQWVKPMAV---- 85 (228)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEBSSSSSCBC-BCHHHHHHHHHHHCSSS-C----EEEEEE---CSCGGGGHHHHHH----
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCcCcccc-cCHHHHHHHHHhhCCCC-c----EEEEEE---eCCHHHHHHHHHH----
Confidence 344566778899996666 4 3 3222 1235677776652 111 0 111111 1222 33555555
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec-
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI- 253 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l- 253 (442)
+|.+.|.+..-..+ .+.+.++.+|+.|++ +.+.+. ..++.+.+.+++ + .+|.|.+
T Consensus 86 aGad~itvH~Ea~~----------------~~~~~i~~i~~~G~k-~gval~--p~t~~e~l~~~l----~-~~D~Vl~m 141 (228)
T 3ovp_A 86 AGANQYTFHLEATE----------------NPGALIKDIRENGMK-VGLAIK--PGTSVEYLAPWA----N-QIDMALVM 141 (228)
T ss_dssp HTCSEEEEEGGGCS----------------CHHHHHHHHHHTTCE-EEEEEC--TTSCGGGTGGGG----G-GCSEEEEE
T ss_pred cCCCEEEEccCCch----------------hHHHHHHHHHHcCCC-EEEEEc--CCCCHHHHHHHh----c-cCCeEEEe
Confidence 48998887543221 234677888999985 555442 223444444333 2 3676643
Q ss_pred ---cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 254 ---PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 254 ---aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+-.-|...-.+.-+.++.+++..++ .+|++ |-|.-..|.-.++++||+.+
T Consensus 142 sv~pGf~Gq~f~~~~l~ki~~lr~~~~~---~~I~V----dGGI~~~t~~~~~~aGAd~~ 194 (228)
T 3ovp_A 142 TVEPGFGGQKFMEDMMPKVHWLRTQFPS---LDIEV----DGGVGPDTVHKCAEAGANMI 194 (228)
T ss_dssp SSCTTTCSCCCCGGGHHHHHHHHHHCTT---CEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCC---CCEEE----eCCcCHHHHHHHHHcCCCEE
Confidence 2223332223445568888887653 45554 45666788899999999996
No 163
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=91.48 E-value=2.8 Score=40.36 Aligned_cols=157 Identities=12% Similarity=0.130 Sum_probs=87.8
Q ss_pred HHHHHHHHhHcCCCEEEE----ccCCCChhHHHHHHHHHHHhcccccccCCccceEee-ecccchhhHHHHHHHHHhCCC
Q 013498 103 KLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG-LSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEv----G~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~-~~r~~~~dI~~a~e~l~~~g~ 177 (442)
-.++++...+.|.+.|-+ +|...+.++ ++.+++.+. .|.+.- +. ....+|..+.. +|.
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~---L~~ir~~v~---------lPVl~Kdfi-~d~~qi~ea~~----~GA 143 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQGAPEF---LTAARQACS---------LPALRKDFL-FDPYQVYEARS----WGA 143 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCCCHHH---HHHHHHTSS---------SCEEEESCC-CSTHHHHHHHH----TTC
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCCCHHH---HHHHHHhcC---------CCEEECCcc-CCHHHHHHHHH----cCC
Confidence 467899999999999977 444445544 444444321 243321 22 13345655544 599
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcc
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~ 257 (442)
+.|.+-.+.- + -+.+.+++++++++|+. +-+.. ++.+++ +.+.++|++.|.+--..
T Consensus 144 D~VlLi~a~L----------~----~~~l~~l~~~a~~lGl~-~lvev-----h~~eEl----~~A~~~ga~iIGinnr~ 199 (272)
T 3tsm_A 144 DCILIIMASV----------D----DDLAKELEDTAFALGMD-ALIEV-----HDEAEM----ERALKLSSRLLGVNNRN 199 (272)
T ss_dssp SEEEEETTTS----------C----HHHHHHHHHHHHHTTCE-EEEEE-----CSHHHH----HHHTTSCCSEEEEECBC
T ss_pred CEEEEccccc----------C----HHHHHHHHHHHHHcCCe-EEEEe-----CCHHHH----HHHHhcCCCEEEECCCC
Confidence 9988765432 1 14567889999999985 54443 344443 45568899988775322
Q ss_pred cc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhCCCEE
Q 013498 258 GI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAGARQV 310 (442)
Q Consensus 258 G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL-A~ANalaAl~aGa~~v 310 (442)
.. ..+..+.+++ +.+|. ++++-.= -|. ...+...+.++||+.|
T Consensus 200 l~t~~~dl~~~~~L~----~~ip~--~~~vIae----sGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 200 LRSFEVNLAVSERLA----KMAPS--DRLLVGE----SGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp TTTCCBCTHHHHHHH----HHSCT--TSEEEEE----SSCCSHHHHHHHHTTTCCEE
T ss_pred CccCCCChHHHHHHH----HhCCC--CCcEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 11 1233444444 34442 2222221 122 1345566677888776
No 164
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=91.48 E-value=3.5 Score=38.04 Aligned_cols=202 Identities=12% Similarity=0.133 Sum_probs=104.4
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEcc--CC---CChhHHHHHHHHHHHhcccccccCCccceEeeeccc---c---hhhHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGF--PA---ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC---N---ERDIK 166 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~--p~---~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~---~---~~dI~ 166 (442)
++.++. ++.+.++|++.||+.. |. ....+.+.++.+.+..+-. +..+.+.... . .+.++
T Consensus 19 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~-------~~~~~~~~~~~~~~~~~~~~~~ 88 (272)
T 2q02_A 19 LSIEAF---FRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLE-------IVTINAVYPFNQLTEEVVKKTE 88 (272)
T ss_dssp SCHHHH---HHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCE-------EEEEEEETTTTSCCHHHHHHHH
T ss_pred CCHHHH---HHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCe-------EEechhhhccCCcHHHHHHHHH
Confidence 455544 5556678999999963 21 1223456666666543221 1122221111 1 23455
Q ss_pred HHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCeEEEccCC---CCCCCHHHHHHHHHH
Q 013498 167 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEFSPED---AGRSDRKFLYEILGE 242 (442)
Q Consensus 167 ~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~-l~~~~~~v~~ar~~G~~~V~f~~ed---asr~d~~~l~~~~~~ 242 (442)
++++.....|.+.|.+...... ....+.. .+.+.+++++|++.|+. +.+-... ..-.+++.+.++++.
T Consensus 89 ~~i~~a~~lG~~~v~~~~g~~~-------~~~~~~~~~~~l~~l~~~a~~~gv~-l~~E~~~~~~~~~~~~~~~~~l~~~ 160 (272)
T 2q02_A 89 GLLRDAQGVGARALVLCPLNDG-------TIVPPEVTVEAIKRLSDLFARYDIQ-GLVEPLGFRVSSLRSAVWAQQLIRE 160 (272)
T ss_dssp HHHHHHHHHTCSEEEECCCCSS-------BCCCHHHHHHHHHHHHHHHHTTTCE-EEECCCCSTTCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEccCCCc-------hhHHHHHHHHHHHHHHHHHHHcCCE-EEEEecCCCcccccCHHHHHHHHHH
Confidence 5666666678888876432211 1345666 78888899999999973 5553321 122356777777666
Q ss_pred HHHcCCcEEecc-CcccccC--HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccccc
Q 013498 243 VIKVGATTLNIP-DTVGITM--PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGE 319 (442)
Q Consensus 243 ~~~~Gad~I~la-DT~G~~~--P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGe 319 (442)
+ + +.+.++ ||.=... -.+ .+.++.++ . +-...+|.||..+-. .+...-|.-..-+|+
T Consensus 161 v---~-~~~g~~~D~~h~~~~~~~~-~~~~~~l~---~---~~i~~vH~~D~~~~~---------~~~~~~~~~~~~~G~ 220 (272)
T 2q02_A 161 A---G-SPFKVLLDTFHHHLYEEAE-KEFASRID---I---SAIGLVHLSGVEDTR---------PTEALADEQRIMLSE 220 (272)
T ss_dssp H---T-CCCEEEEEHHHHHHCTTHH-HHHHHHCC---G---GGEEEEEECBCCCCS---------CGGGCCGGGCBCCCT
T ss_pred h---C-cCeEEEEEchHhhccCCCc-hhhhhhCC---H---hHEEEEEeCCCcCCC---------CchhccccccccCCC
Confidence 5 3 333322 6542221 011 13444432 1 245788888864321 000000111112233
Q ss_pred ccCcccHHHHHHHHHhccc
Q 013498 320 RAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 320 raGNa~lEevv~~L~~~g~ 338 (442)
+ |+.+..+++..|+..|.
T Consensus 221 G-~~id~~~~~~~L~~~gy 238 (272)
T 2q02_A 221 K-DVMQNYQQVQRLENMGY 238 (272)
T ss_dssp T-CSSCHHHHHHHHHHTTC
T ss_pred C-CcccHHHHHHHHHhcCC
Confidence 1 36899999999998754
No 165
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=91.47 E-value=11 Score=36.49 Aligned_cols=193 Identities=12% Similarity=0.122 Sum_probs=116.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la~ 89 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQ-------GRVPVIAGAGSNNPVEAVRYAQ 89 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSCBEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEccCCCCHHHHHHHHH
Confidence 367788889999999999999876 4 455666665 45565555542 2357788877655444 44443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
. .+.+|++.+-+..|-. ++.|.++.++-....++ ..++.-+-++.+. ....+++.+.+++ +.
T Consensus 90 ~-A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~~tg~~l~~~~~~~La----~~- 153 (297)
T 2rfg_A 90 H-AQQAGADAVLCVAGYY-------NRPSQEGLYQHFKMVHD---AIDIPIIVYNIPPRAVVDIKPETMARLA----AL- 153 (297)
T ss_dssp H-HHHHTCSEEEECCCTT-------TCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHH----TS-
T ss_pred H-HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCCCCCHHHHHHHH----cC-
Confidence 3 3456999887665532 24577776666655544 3355534555432 3356777777665 32
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|-.. ++.+ +++..++ +..+ +-..+++ .+.++..|++.+ +.| .+|...+
T Consensus 154 pnIvgiKds~gd~~--~~~~----~~~~~~~--~f~v-~~G~d~~------~l~~l~~G~~G~---is~----~an~~P~ 211 (297)
T 2rfg_A 154 PRIVGVKDATTDLA--RISR----ERMLINK--PFSF-LSGDDMT------AIAYNASGGQGC---ISV----SANIAPA 211 (297)
T ss_dssp TTEEEEEECSCCTT--HHHH----HHTTCCS--CCEE-EESCGGG------HHHHHHTTCCEE---EES----GGGTCHH
T ss_pred CCEEEEEeCCCCHH--HHHH----HHHhcCC--CEEE-EeCcHHH------HHHHHHCCCCEE---Eec----HHHhhHH
Confidence 57899999998643 3443 3344442 2222 3344332 455777897643 322 3566677
Q ss_pred HHHHHHH
Q 013498 328 EVVMAFK 334 (442)
Q Consensus 328 evv~~L~ 334 (442)
.++...+
T Consensus 212 ~~~~l~~ 218 (297)
T 2rfg_A 212 LYGQMQT 218 (297)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666554
No 166
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=91.45 E-value=0.66 Score=44.99 Aligned_cols=85 Identities=20% Similarity=0.144 Sum_probs=71.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHH
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGAC 304 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl~ 304 (442)
+..|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG--RVPVIAGAGSNSTAEAIAFVRHAQN 93 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccHHHHHHHHHHHHH
Confidence 578999999999999999999999999998 48899999999999887654 35555554 6788888999999999
Q ss_pred hCCCEEEeccc
Q 013498 305 AGARQVEVTIN 315 (442)
Q Consensus 305 aGa~~vd~Tv~ 315 (442)
+||+.+=+.--
T Consensus 94 ~Gadavlv~~P 104 (292)
T 2vc6_A 94 AGADGVLIVSP 104 (292)
T ss_dssp TTCSEEEEECC
T ss_pred cCCCEEEEcCC
Confidence 99999865443
No 167
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.44 E-value=3 Score=41.07 Aligned_cols=204 Identities=14% Similarity=0.033 Sum_probs=115.9
Q ss_pred HHHHhHcCCCEEEEcc----------CCCC----hhHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 107 ARQLAKLGVDIIEAGF----------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~----------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
++.++++|++.|=+|. |... .+..+.++.+++..++ .|.+. ||+ +...+.+.
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~--------~PviaD~d~Gyg--~~~~v~~t 121 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPN--------LCVVVDGDTGGG--GPLNVQRF 121 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSS--------SEEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccC--------CCEEEeCCCCCC--CHHHHHHH
Confidence 5677889999998863 3211 1234566666664322 23333 333 45555555
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~ 244 (442)
...+..+|+..|++-....+. |+.-+-=.+.++..++++.+++...+-++ .|.--. |+. ....+.+++-++...
T Consensus 122 v~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~-~I~ARt-da~a~~gl~~ai~Ra~Ay~ 199 (318)
T 1zlp_A 122 IRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDF-FLVART-DARAPHGLEEGIRRANLYK 199 (318)
T ss_dssp HHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCC-EEEEEE-CTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCc-EEEEee-HHhhhcCHHHHHHHHHHHH
Confidence 555556899999998766421 11100003566777777766665544333 122111 211 111256777778889
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec--CCcchHHHHHHHHHHhCCCEEEecccccccccC
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ--NDLGLSTANTIAGACAGARQVEVTINGIGERAG 322 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~H--NDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraG 322 (442)
++|||.|.+. |.-.++++.++.+. ++ +|+-+-+- +-..+- +.-.--+.|+++|-....++ |+-
T Consensus 200 eAGAd~i~~e---~~~~~e~~~~i~~~----l~----~P~lan~~~~g~~~~~--~~~eL~~lGv~~v~~~~~~~--raa 264 (318)
T 1zlp_A 200 EAGADATFVE---APANVDELKEVSAK----TK----GLRIANMIEGGKTPLH--TPEEFKEMGFHLIAHSLTAV--YAT 264 (318)
T ss_dssp HTTCSEEEEC---CCCSHHHHHHHHHH----SC----SEEEEEECTTSSSCCC--CHHHHHHHTCCEEEECSHHH--HHH
T ss_pred HcCCCEEEEc---CCCCHHHHHHHHHh----cC----CCEEEEeccCCCCCCC--CHHHHHHcCCeEEEEchHHH--HHH
Confidence 9999999986 34455666655554 43 34433222 111111 13345567999986665543 778
Q ss_pred cccHHHHHHHHHhcc
Q 013498 323 NASLEEVVMAFKCRG 337 (442)
Q Consensus 323 Na~lEevv~~L~~~g 337 (442)
+.++++++..|...|
T Consensus 265 ~~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 265 ARALVNIMKILKEKG 279 (318)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 888888888888765
No 168
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=91.44 E-value=0.77 Score=45.12 Aligned_cols=85 Identities=19% Similarity=0.141 Sum_probs=73.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+++.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-
T Consensus 37 dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK--RVPVVAGAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999985 7899999999999887654 46777776 689999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=+..
T Consensus 115 ~~Gadavlv~~ 125 (315)
T 3si9_A 115 KAGADAVLVVT 125 (315)
T ss_dssp HTTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 99999986643
No 169
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=91.43 E-value=0.76 Score=44.90 Aligned_cols=85 Identities=18% Similarity=0.145 Sum_probs=71.9
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG--KIPVIVGAGTNSTEKTLKLVKQAE 104 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEcCCCccHHHHHHHHHHHH
Confidence 3578999999999999999999999999998 48899999999999887654 35666654 678888999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=..-
T Consensus 105 ~~Gadavlv~~ 115 (306)
T 1o5k_A 105 KLGANGVLVVT 115 (306)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 99999986643
No 170
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=91.38 E-value=0.32 Score=45.57 Aligned_cols=68 Identities=16% Similarity=0.086 Sum_probs=43.5
Q ss_pred HHHHHHHHHhHcCCCEEEEccCC----CChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 102 EKLDIARQLAKLGVDIIEAGFPA----ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG~p~----~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+-.++++.+.+.|++.|-+--.. ....+++.++.+++... .|.+.+-.-.+.++++.+++ .|+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~---------ipvi~~Ggi~~~~~~~~~l~----~Ga 102 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT---------LPIIASGGAGKMEHFLEAFL----RGA 102 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCC---------SCEEEESCCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCC---------CCEEEeCCCCCHHHHHHHHH----cCC
Confidence 45789999999999999874221 12235677877766431 25454433335677777765 388
Q ss_pred CEEEE
Q 013498 178 PRIHT 182 (442)
Q Consensus 178 ~~v~i 182 (442)
+.|.+
T Consensus 103 d~V~i 107 (247)
T 3tdn_A 103 DKVSI 107 (247)
T ss_dssp SEECC
T ss_pred Ceeeh
Confidence 88764
No 171
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=91.35 E-value=0.36 Score=45.14 Aligned_cols=191 Identities=10% Similarity=0.016 Sum_probs=102.1
Q ss_pred HHHHHHHhHcCCCEEEEccC--CCChhHHHHHHHHHHHhcccccccCCccceEeeec-ccch-hhHHHHHHHHHhCCCCE
Q 013498 104 LDIARQLAKLGVDIIEAGFP--AASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS-RCNE-RDIKTAWEAVKYAKRPR 179 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG~p--~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~-r~~~-~dI~~a~e~l~~~g~~~ 179 (442)
.+.++.+.++|++.||+... ...+ +.+.++.+.+..+-.+. ...+. .-|. .... +.++.+++.....|.+.
T Consensus 26 ~~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~---~~~~~-~~~~~~~~~~~~~~~~i~~A~~lGa~~ 100 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECV---FSSPL-ELWREDGQLNPELEPTLRRAEACGAGW 100 (264)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEE---EEEEE-EEECTTSSBCTTHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEE---Eecch-hhcCCchhHHHHHHHHHHHHHHcCCCE
Confidence 34677788899999999532 1122 55566655554322110 00000 0111 0122 66777777777789998
Q ss_pred EEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHHHcCCcEEec-cCcc
Q 013498 180 IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVIKVGATTLNI-PDTV 257 (442)
Q Consensus 180 v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~~~Gad~I~l-aDT~ 257 (442)
|.+....... . ..+.+++++|++.|+. +.+-..... -.+++.+.++++.+.+.+.. +.+ -||.
T Consensus 101 v~~~~g~~~~----------~---~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g 165 (264)
T 1yx1_A 101 LKVSLGLLPE----------Q---PDLAALGRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIG 165 (264)
T ss_dssp EEEEEECCCS----------S---CCHHHHHHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETT
T ss_pred EEEecCCCCc----------H---HHHHHHHHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehh
Confidence 8876543210 0 1455677888888873 554322110 12567777888777665655 444 3883
Q ss_pred ccc-CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCc-ccHHHHHHHHHh
Q 013498 258 GIT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN-ASLEEVVMAFKC 335 (442)
Q Consensus 258 G~~-~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGN-a~lEevv~~L~~ 335 (442)
-.. ......+.++.+.. -...+|.+|..+-. +-++.+ .-+|+ |. .+...++..|+.
T Consensus 166 ~~~~~~~d~~~~~~~~~~-------~i~~vHlkD~~~~~----------~~~~~~---~~~G~--G~~id~~~~~~~L~~ 223 (264)
T 1yx1_A 166 NWRWQEQAADEAALRLGR-------YVGYVHCKAVIRNR----------DGKLVA---VPPSA--ADLQYWQRLLQHFPE 223 (264)
T ss_dssp GGGGGTCCHHHHHHHHGG-------GEEEEEECEEEECT----------TSCEEE---ECCCH--HHHHHHHHHHTTSCT
T ss_pred hhhhcCCCHHHHHHHhhh-------hEEEEEeecccCCC----------CCceee---ECCCC--CCccCHHHHHHHhhc
Confidence 221 11223334444432 34678888765421 111111 23444 77 888888888775
Q ss_pred c
Q 013498 336 R 336 (442)
Q Consensus 336 ~ 336 (442)
.
T Consensus 224 ~ 224 (264)
T 1yx1_A 224 G 224 (264)
T ss_dssp T
T ss_pred C
Confidence 3
No 172
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.31 E-value=1.4 Score=43.94 Aligned_cols=148 Identities=17% Similarity=0.194 Sum_probs=88.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEE--------------------EEccCCCChhHHHHHHHHHHHhcccccccCCccceEee
Q 013498 97 TLTSKEKLDIARQLAKLGVDII--------------------EAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG 156 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~I--------------------EvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~ 156 (442)
.|+.++=..+.+.-.+.|+..+ -+|+. .-.++..++.+++.. .|.|..
T Consensus 87 ~l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~--~~~n~~LL~~va~~g----------kPviLs 154 (349)
T 2wqp_A 87 ALNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSG--ECNNYPLIKLVASFG----------KPIILS 154 (349)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGG--GTTCHHHHHHHHTTC----------SCEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcc--cccCHHHHHHHHhcC----------CeEEEE
Confidence 3566666666666666665554 33322 123466777766531 266766
Q ss_pred ecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCCCCCCCHH
Q 013498 157 LSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRK 234 (442)
Q Consensus 157 ~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~edasr~d~~ 234 (442)
-+.++.++|+.|++.+...|.+ |.+.=++|. +-.++++ ++ ..+|...|+. ++. |.++ | .+.-
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~-iiLlhc~s~------Yp~~~~~-~n--L~ai~~lk~~f~~lp-Vg~s--d--Ht~G- 218 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVP-YALLHCTNI------YPTPYED-VR--LGGMNDLSEAFPDAI-IGLS--D--HTLD- 218 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCC-EEEEECCCC------SSCCGGG-CC--THHHHHHHHHCTTSE-EEEE--C--CSSS-
T ss_pred CCCCCHHHHHHHHHHHHHcCCC-EEEEeccCC------CCCChhh-cC--HHHHHHHHHHCCCCC-EEeC--C--CCCc-
Confidence 6667889999999888776663 434323332 1111111 11 1344555554 454 6542 2 1111
Q ss_pred HHHHHHHHHHHcCCcEEe--------c--cCcccccCHHHHHHHHHHHHH
Q 013498 235 FLYEILGEVIKVGATTLN--------I--PDTVGITMPTEFGKLIADIKA 274 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~--------l--aDT~G~~~P~~v~~li~~l~~ 274 (442)
..+..+++.+||+.|- + +|..=.+.|+++.++++.+++
T Consensus 219 --~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~ 266 (349)
T 2wqp_A 219 --NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHA 266 (349)
T ss_dssp --SHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHH
Confidence 4677788889998653 4 788888999999999999986
No 173
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=91.30 E-value=13 Score=38.14 Aligned_cols=204 Identities=15% Similarity=0.119 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCC-hH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC----------
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATS-GI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA---------- 228 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~S-d~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda---------- 228 (442)
..+.+.++.+..+|+..|+|-..+. +- |+.-+-=.+.+|.+++++.+...+...|.+.|.+.=.|+
T Consensus 160 ~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~ 239 (433)
T 3eol_A 160 LDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDI 239 (433)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCC
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCc
Confidence 3455556666677999999988775 32 222111137899999999888777767764222211122
Q ss_pred ------------C---------CCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEe
Q 013498 229 ------------G---------RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTH 287 (442)
Q Consensus 229 ------------s---------r~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H 287 (442)
. +...+..++-+++..+ |||.|.+ .+ |.-.++++.++.+.++..+|. ..+.+-
T Consensus 240 d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~-e~-~~~~~eei~~f~~~v~~~~P~---~~L~~~ 313 (433)
T 3eol_A 240 DERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWM-ET-SKPDLAQARRFAEAVHKAHPG---KLLAYN 313 (433)
T ss_dssp STTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEE-CC-SSCCHHHHHHHHHHHHHHSTT---CCEEEE
T ss_pred ccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEE-eC-CCCCHHHHHHHHHHhcccCCC---cccccC
Confidence 1 1345666666666677 9999977 11 456899999999999987874 234443
Q ss_pred ecCCcchH-------HHH-HHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHH
Q 013498 288 CQNDLGLS-------TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKM 359 (442)
Q Consensus 288 ~HNDlGLA-------~AN-alaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~ 359 (442)
+--.+..- +.+ .-.--+.|+.++-.++.+ =|+-+.++.+++..+...| ....++ |.+ .++
T Consensus 314 ~sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~--~raa~~A~~~~a~~i~~~G------~~ayve---~Q~-~e~ 381 (433)
T 3eol_A 314 CSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAG--FHQLNYGMFELARGYKDRQ------MAAYSE---LQQ-AEF 381 (433)
T ss_dssp CCSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHH--HHHHHHHHHHHHHHHHHHT------HHHHHH---HHH-HHH
T ss_pred CCCCCcccccCChhHHhHHHHHHHHcCCeEEEeCcHH--HHHHHHHHHHHHHHHHHcC------CHHHHH---HHH-Hhh
Confidence 32222211 111 123335799988666654 4778888999988887653 111111 211 112
Q ss_pred HHHHhCCCCCCCCccccchhhhhcc
Q 013498 360 VEEYTGLHVQPHKAIVGANAFAHES 384 (442)
Q Consensus 360 v~~~~g~~i~~~~pivG~~aF~h~s 384 (442)
.++..|+..-.|+-.+|.++|-.-+
T Consensus 382 ~~~~~g~~~~~hq~~~g~~y~d~~~ 406 (433)
T 3eol_A 382 AAEADGYTATKHQREVGTGYFDAVS 406 (433)
T ss_dssp HHGGGTCCCC--------CHHHHHH
T ss_pred hhhccCceeeecccccccchHHHHH
Confidence 2356899888899999999885433
No 174
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.29 E-value=0.85 Score=44.77 Aligned_cols=85 Identities=19% Similarity=0.177 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st~eai~la~~A~ 115 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG--RIPVIAGTGANSTREAVALTEAAK 115 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHHHHHHH
Confidence 46789999999999999999999999999986 7899999999999887755 46777776 688999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=+.-
T Consensus 116 ~~Gadavlv~~ 126 (314)
T 3qze_A 116 SGGADACLLVT 126 (314)
T ss_dssp HTTCSEEEEEC
T ss_pred HcCCCEEEEcC
Confidence 99999986653
No 175
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.28 E-value=2.5 Score=41.12 Aligned_cols=111 Identities=21% Similarity=0.160 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v 265 (442)
.|.++++..++...+- .... |...++..+-.+++.+.+.++.+.++|+..|.|-|.++ ....++.
T Consensus 61 vt~~em~~~~~~I~~~---~~~P-viaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~ 136 (295)
T 1xg4_A 61 STLDDVLTDIRRITDV---CSLP-LLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEM 136 (295)
T ss_dssp SCHHHHHHHHHHHHHH---CCSC-EEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhh---CCCC-EEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHH
Confidence 4778888777665544 3344 77777666444899999999999999999999999984 3444566
Q ss_pred HHHHHHHHHhCCCCcceeEEEeec----CCcchHHHHHHHHHHhCCCEEEe
Q 013498 266 GKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 266 ~~li~~l~~~~p~~~~v~i~~H~H----NDlGLA~ANalaAl~aGa~~vd~ 312 (442)
.+.|+.+++.-.+. +..|-.-+- +.+--++.-+.+..+|||+.|=.
T Consensus 137 ~~~I~Aa~~a~~~~-~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~ 186 (295)
T 1xg4_A 137 VDRIRAAVDAKTDP-DFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFP 186 (295)
T ss_dssp HHHHHHHHHHCSST-TSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhccCC-CcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEE
Confidence 67777777664221 233433331 22235777888999999998743
No 176
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=91.26 E-value=2.1 Score=39.65 Aligned_cols=198 Identities=14% Similarity=0.143 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEc-cCCC----ChhHHHHHHHHHHHhcccccccCCccc-eEee---ecccc-------
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAG-FPAA----SKEDFEAVRTIAKEVGNAVDAESGYVP-VICG---LSRCN------- 161 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG-~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~-~i~~---~~r~~------- 161 (442)
.+.++. ++.+.++|++.||+. .+.. .+.+.+.++.+.+.. ++.. .+.. +....
T Consensus 14 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~--------gl~~~~~~~~~~~~~~~~~~~~~~ 82 (278)
T 1i60_A 14 SNLKLD---LELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTH--------HIKPLALNALVFFNNRDEKGHNEI 82 (278)
T ss_dssp CCHHHH---HHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTS--------SCEEEEEEEEECCSSCCHHHHHHH
T ss_pred CCHHHH---HHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHc--------CCCeeeeccccccccCCHHHHHHH
Confidence 455554 455567899999997 4311 223445555555432 2211 1211 11011
Q ss_pred hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCCeEEEccCCC---CCCCHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCDDVEFSPEDA---GRSDRK 234 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~G~~~V~f~~eda---sr~d~~ 234 (442)
.+.++++++.....|.+.|.+.....+. +.+ .+...+.+.++.++|++.|+. +.+-.... .-.+++
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~------~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~ 155 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQ------KIVKEEIKKSSVDVLTELSDIAEPYGVK-IALEFVGHPQCTVNTFE 155 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSS------CCCHHHHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCTTBSSCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhcCCE-EEEEecCCccchhcCHH
Confidence 2334555666566788888774322210 123 244566667777888888873 55533221 223667
Q ss_pred HHHHHHHHHHHcCCcEEec-cCcccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 013498 235 FLYEILGEVIKVGATTLNI-PDTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~l-aDT~G~----~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~ 309 (442)
.+.++++.+ +.+.+.+ -||.=. ..|.+ + + +.+. +-...+|.||..+-. .|-.+
T Consensus 156 ~~~~l~~~~---~~~~~g~~~D~~h~~~~g~d~~~---~---~-~~~~---~~i~~vHl~D~~~~~---------~g~~~ 213 (278)
T 1i60_A 156 QAYEIVNTV---NRDNVGLVLDSFHFHAMGSNIES---L---K-QADG---KKIFIYHIDDTEDFP---------IGFLT 213 (278)
T ss_dssp HHHHHHHHH---CCTTEEEEEEHHHHHHTTCCHHH---H---H-TSCG---GGEEEEEECEECCCC---------TTTCC
T ss_pred HHHHHHHHh---CCCCeeEEEEeEEEeecCCCHHH---H---H-hcCc---ceEEEEEecCCCCCC---------ccchh
Confidence 777776665 3332322 255311 12322 2 2 2222 245788999865431 01000
Q ss_pred EEecccccccccCcccHHHHHHHHHhccc
Q 013498 310 VEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 310 vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
+.--.-+|+ |..+.++++..|+..|.
T Consensus 214 -~~~~~~~G~--G~id~~~~~~~L~~~gy 239 (278)
T 1i60_A 214 -DEDRVWPGQ--GAIDLDAHLSALKEIGF 239 (278)
T ss_dssp -GGGEESTTS--SSSCHHHHHHHHHHTTC
T ss_pred -hccCCCCCC--CCCcHHHHHHHHHHcCC
Confidence 000123444 88999999999998763
No 177
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=91.20 E-value=0.71 Score=44.92 Aligned_cols=100 Identities=24% Similarity=0.214 Sum_probs=78.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHHH
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGAC 304 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl~ 304 (442)
++.|.+-+.++++.+++.|++.|.++-|+| .+++++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG--RVPVIAGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEccCCCCHHHHHHHHHHHHh
Confidence 678999999999999999999999999998 48999999999999887654 35555554 6788889999999999
Q ss_pred hCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 305 AGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
+||+.+=+..--.-. .+-++++..++
T Consensus 94 ~Gadavlv~~P~y~~----~s~~~l~~~f~ 119 (297)
T 2rfg_A 94 AGADAVLCVAGYYNR----PSQEGLYQHFK 119 (297)
T ss_dssp HTCSEEEECCCTTTC----CCHHHHHHHHH
T ss_pred cCCCEEEEcCCCCCC----CCHHHHHHHHH
Confidence 999998665433321 24455554443
No 178
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.17 E-value=0.78 Score=45.63 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=73.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
..+.|.+-+.++++.+++.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-++. +|+.--++..+..|-
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR--RVPVLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCSSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999986 8999999999999887654 46676665 588888999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=+..
T Consensus 124 ~~Gadavlv~~ 134 (343)
T 2v9d_A 124 QAGADGIVVIN 134 (343)
T ss_dssp HHTCSEEEEEC
T ss_pred hcCCCEEEECC
Confidence 99999986643
No 179
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=91.17 E-value=0.67 Score=45.59 Aligned_cols=85 Identities=19% Similarity=0.068 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.+..|.+-+.++++.+++.|++.|.++=|+|= ++.++-.++++.+.+...+ .++|-+|. +|+.--++..+..|-
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP--DFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT--TSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999995 8999999999999887654 46777776 789999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=+..
T Consensus 104 ~~Gadavlv~~ 114 (318)
T 3qfe_A 104 VAGANYVLVLP 114 (318)
T ss_dssp HHTCSEEEECC
T ss_pred HcCCCEEEEeC
Confidence 99999986643
No 180
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.11 E-value=0.58 Score=45.60 Aligned_cols=84 Identities=12% Similarity=0.115 Sum_probs=73.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+++.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR--RVPVVAGVASTSVADAVAQAKLYE 96 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCBEEEEEESSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCHHHHHHHHHHHH
Confidence 36799999999999999999999999999995 8999999999999887654 35666665 689999999999999
Q ss_pred HhCCCEEEec
Q 013498 304 CAGARQVEVT 313 (442)
Q Consensus 304 ~aGa~~vd~T 313 (442)
++||+.+=+.
T Consensus 97 ~~Gadavlv~ 106 (300)
T 3eb2_A 97 KLGADGILAI 106 (300)
T ss_dssp HHTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 9999998664
No 181
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.11 E-value=8.2 Score=38.44 Aligned_cols=178 Identities=19% Similarity=0.174 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEcc--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 167 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~--p~~~~--------~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 167 (442)
=+.++.+++++.+.++|.+.+=.++ |..++ +.++.+++.++.. ++ |.++ .-....+++.
T Consensus 117 es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--------Gl-~~~t--e~~d~~~~~~ 185 (350)
T 1vr6_A 117 EGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--------GM-YVVT--EALGEDDLPK 185 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEE--ECSSGGGHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--------CC-cEEE--EeCCHHHHHH
Confidence 4899999999999999999987764 43333 3344555554443 22 2222 2235666766
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
..+. ++.+.| +..+. +. . ++++++-+.|.. |.+.- +.-.+++.+...++.+...|
T Consensus 186 l~~~-----vd~lkI--gAr~~--------~n---~----~LL~~va~~~kP-Vilk~--G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 186 VAEY-----ADIIQI--GARNA--------QN---F----RLLSKAGSYNKP-VLLKR--GFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp HHHH-----CSEEEE--CGGGT--------TC---H----HHHHHHHTTCSC-EEEEC--CTTCCHHHHHHHHHHHHHTT
T ss_pred HHHh-----CCEEEE--Ccccc--------cC---H----HHHHHHHccCCc-EEEcC--CCCCCHHHHHHHHHHHHHCC
Confidence 5543 466655 33221 11 1 234444467876 77753 23347888889999999999
Q ss_pred CcEEeccCccccc----CHHHHH-HHHHHHHHhCCCCcceeEEE---eecCCcchHHHHHHHHHHhCCC--EEEeccc
Q 013498 248 ATTLNIPDTVGIT----MPTEFG-KLIADIKANTPGIENVVIST---HCQNDLGLSTANTIAGACAGAR--QVEVTIN 315 (442)
Q Consensus 248 ad~I~laDT~G~~----~P~~v~-~li~~l~~~~p~~~~v~i~~---H~HNDlGLA~ANalaAl~aGa~--~vd~Tv~ 315 (442)
-..+.||.--+.. +++.+. ..+..+++.+. ++|.+ |.=.+.-+...-+++|+.+||+ .|+.=+.
T Consensus 241 N~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~----lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 241 NTKIILCERGIRTFEKATRNTLDISAVPIIRKESH----LPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS----SCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred CCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhC----CCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 8888887522211 122221 23566777652 45755 5544444567778899999999 8877554
No 182
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=91.01 E-value=0.74 Score=43.24 Aligned_cols=162 Identities=18% Similarity=0.123 Sum_probs=90.0
Q ss_pred HHHHHhHcCCCEEEE----cc--CCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchh-hHHHHHHHHHhCCCC
Q 013498 106 IARQLAKLGVDIIEA----GF--PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER-DIKTAWEAVKYAKRP 178 (442)
Q Consensus 106 ia~~L~~~GV~~IEv----G~--p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~-dI~~a~e~l~~~g~~ 178 (442)
-++.+ +.|+|.+++ |. |..+ --.+.++.+++.... +..+-+--.+.+ -++.+.++ |.+
T Consensus 18 ~i~~~-~~gad~lHvDvmDG~fvpn~t-~G~~~v~~lr~~~~~---------~~dvhLmv~dp~~~i~~~~~a----GAd 82 (231)
T 3ctl_A 18 QIEFI-DSHADYFHIDIMDGHFVPNLT-LSPFFVSQVKKLATK---------PLDCHLMVTRPQDYIAQLARA----GAD 82 (231)
T ss_dssp HHHHH-HTTCSCEEEEEECSSSSSCCC-BCHHHHHHHHTTCCS---------CEEEEEESSCGGGTHHHHHHH----TCS
T ss_pred HHHHH-HcCCCEEEEEEEeCccCccch-hcHHHHHHHHhccCC---------cEEEEEEecCHHHHHHHHHHc----CCC
Confidence 34556 889887665 33 4222 123567776653211 111222222333 36666655 889
Q ss_pred EEEEeecC-ChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEecc---
Q 013498 179 RIHTFIAT-SGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP--- 254 (442)
Q Consensus 179 ~v~i~~~~-Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~la--- 254 (442)
.|.+..-. ++ | +.+.++.+|+.|++ +.+.+. ..++.+.+.++++ ++|.|.+-
T Consensus 83 ~itvh~Ea~~~-~---------------~~~~i~~i~~~G~k-~gv~ln--p~tp~~~~~~~l~-----~~D~VlvmsV~ 138 (231)
T 3ctl_A 83 FITLHPETING-Q---------------AFRLIDEIRRHDMK-VGLILN--PETPVEAMKYYIH-----KADKITVMTVD 138 (231)
T ss_dssp EEEECGGGCTT-T---------------HHHHHHHHHHTTCE-EEEEEC--TTCCGGGGTTTGG-----GCSEEEEESSC
T ss_pred EEEECcccCCc-c---------------HHHHHHHHHHcCCe-EEEEEE--CCCcHHHHHHHHh-----cCCEEEEeeec
Confidence 88765433 21 1 34678889999985 555442 1244444444332 68877541
Q ss_pred -CcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 255 -DTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 255 -DT~G~~~P~~v~~li~~l~~~~p--~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
-.-|-.......+.|+.+++..+ +. +++|++ |-|.-..|.-.++++||+.+=
T Consensus 139 pGfggQ~f~~~~l~kI~~lr~~~~~~~~-~~~I~V----dGGI~~~~~~~~~~aGAd~~V 193 (231)
T 3ctl_A 139 PGFAGQPFIPEMLDKLAELKAWREREGL-EYEIEV----DGSCNQATYEKLMAAGADVFI 193 (231)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTC-CCEEEE----ESCCSTTTHHHHHHHTCCEEE
T ss_pred cCcCCccccHHHHHHHHHHHHHHhccCC-CceEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 12243334455566666665432 11 245665 778888899999999999973
No 183
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=90.92 E-value=2.6 Score=39.53 Aligned_cols=156 Identities=13% Similarity=0.143 Sum_probs=91.0
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCC----CChhH--HHHHHHHHHHhcccccccCCccce
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPA----ASKED--FEAVRTIAKEVGNAVDAESGYVPV 153 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~----~~~~d--~e~v~~l~~~~~~~~~~~~~l~~~ 153 (442)
|++.-++ |. |.-..+++.|+.=++. .+.|-+.|++-.+. +...+ .+.++.+.+..+. ...+.
T Consensus 51 v~v~tvi---gF--P~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~------~~lKv 118 (226)
T 1vcv_A 51 VKLCVVA---DF--PFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG------RVVKV 118 (226)
T ss_dssp SEEEEEE---ST--TTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT------SEEEE
T ss_pred CeEEEEe---CC--CCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC------CCceE
Confidence 6666553 43 2223588999999999 99999999985431 12111 3345555554322 12345
Q ss_pred EeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHH----hCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 154 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHK----LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 154 i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~----l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
|.-.+-.+.+.+..+.+...++|.+.|.++..-++.--+.. -|-|.+++ +.+++.++ +.|.. +.+-+--.-
T Consensus 119 IlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv-~lm~~~i~---~~g~~-v~vKaaGGi 193 (226)
T 1vcv_A 119 ITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERA-AAIARYIK---EKGYR-LGVKMAGGI 193 (226)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHH-HHHHHHHH---HHTCC-CEEEEESSC
T ss_pred EEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHH-HHHHHHHH---HhCCC-ceEEEeCCC
Confidence 66666667788888888878889999998744331111111 13454443 44444443 44532 333221233
Q ss_pred CCCHHHHHHHHHHHHHcCCc----EEecc
Q 013498 230 RSDRKFLYEILGEVIKVGAT----TLNIP 254 (442)
Q Consensus 230 r~d~~~l~~~~~~~~~~Gad----~I~la 254 (442)
|+ .+...++++.+ ++|++ ||.-.
T Consensus 194 rt-~~~al~~i~a~-~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 194 RT-REQAKAIVDAI-GWGEDPARVRLGTS 220 (226)
T ss_dssp CS-HHHHHHHHHHH-CSCSCTTTEEEEES
T ss_pred CC-HHHHHHHHHHH-HCCCCcCCceEecC
Confidence 44 77777888877 68999 77654
No 184
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=90.91 E-value=0.77 Score=45.92 Aligned_cols=154 Identities=17% Similarity=0.151 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhHcCCCEE-EEccCC----------------CChhHHHHHHHHHHHhcccccccCCccceEeeeccc-c
Q 013498 100 SKEKLDIARQLAKLGVDII-EAGFPA----------------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N 161 (442)
Q Consensus 100 ~e~kl~ia~~L~~~GV~~I-EvG~p~----------------~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~-~ 161 (442)
.+.-..+.+...+.|+..+ |+=.|. ..-+.++.++++++. + .|.+.--+.. +
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~---------~-kPVilk~G~~~t 225 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSY---------N-KPVLLKRGFMNT 225 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTT---------C-SCEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHcc---------C-CcEEEcCCCCCC
Confidence 4555556666677888765 331111 011234556666532 1 2555444443 6
Q ss_pred hhhHHHHHHHHHhCCCCEEEEe---ecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccCCCCCCCHHHHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTF---IATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPEDAGRSDRKFLY 237 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~---~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f~~edasr~d~~~l~ 237 (442)
.++++.|++.+...|-+.+.+. +.+-+..-...+++ ..+...|+. |+. |.+.+ +-+.-..+++.
T Consensus 226 l~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl----------~ai~~lk~~~~lp-Vi~ds-sHs~G~~~~v~ 293 (350)
T 1vr6_A 226 IEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDI----------SAVPIIRKESHLP-ILVDP-SHSGGRRDLVI 293 (350)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCT----------THHHHHHHHBSSC-EEECH-HHHHCSGGGHH
T ss_pred HHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhH----------HHHHHHHHhhCCC-EEEeC-CCCCcccchHH
Confidence 7899999998888888776664 21111100011121 223334444 776 65533 21223446777
Q ss_pred HHHHHHHHcCCc--EEe--------ccCcccccCHHHHHHHHHHHHHh
Q 013498 238 EILGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 238 ~~~~~~~~~Gad--~I~--------laDT~G~~~P~~v~~li~~l~~~ 275 (442)
.+...++.+||+ .|- ++|-.=.+.|+++.++++.+++.
T Consensus 294 ~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i 341 (350)
T 1vr6_A 294 PLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKL 341 (350)
T ss_dssp HHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHH
Confidence 888888889999 443 56999999999999999998863
No 185
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=90.83 E-value=10 Score=35.31 Aligned_cols=187 Identities=14% Similarity=0.049 Sum_probs=109.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cchhhH--HHHHHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDI--KTAWEAV 172 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI--~~a~e~l 172 (442)
-..+.++..++.+...+.|+..+-+ +|...+ ...+.+.. + .+..+.+|-. ....++ ..+-+
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv-~p~~v~-------~a~~~l~g-v-----~v~tvigFP~G~~~~~~k~~E~~~-- 75 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCV-NPIYAP-------VVRPLLRK-V-----KLCVVADFPFGALPTASRIALVSR-- 75 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE-CGGGHH-------HHGGGCSS-S-----EEEEEESTTTCCSCHHHHHHHHHH--
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE-CHHHHH-------HHHHHhCC-C-----eEEEEeCCCCCCCchHHHHHHHHH--
Confidence 3468999999999999999999998 554322 22222211 0 0112223311 111222 22222
Q ss_pred HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~ 252 (442)
...|.+.|.+.+....+ ..-..+++.+.+.+.++.+.+.+++ |.+ |. ...+.+.+...++.+.++|||.|-
T Consensus 76 i~~GAdEID~Vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lK-vIl--Et-~~Lt~eei~~a~~ia~eaGADfVK 146 (226)
T 1vcv_A 76 LAEVADEIDVVAPIGLV-----KSRRWAEVRRDLISVVGAAGGRVVK-VIT--EE-PYLRDEERYTLYDIIAEAGAHFIK 146 (226)
T ss_dssp HTTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEE-EEC--CG-GGCCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHCCCCEEEEecchhhh-----cCCCHHHHHHHHHHHHHHHcCCCce-EEE--ec-cCCCHHHHHHHHHHHHHcCCCEEE
Confidence 34699999998876532 2235677888888888877654442 444 32 233478899999999999999987
Q ss_pred cc--Cc----------ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh---CCC----EEEec
Q 013498 253 IP--DT----------VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA---GAR----QVEVT 313 (442)
Q Consensus 253 la--DT----------~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~a---Ga~----~vd~T 313 (442)
-. =+ .|-++|+++.-+-+.+++ .++ +++ +-.--.--. ...+++-+++ ||+ +|=+|
T Consensus 147 TSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~-~g~--~v~--vKaaGGirt-~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 147 SSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE-KGY--RLG--VKMAGGIRT-REQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH-HTC--CCE--EEEESSCCS-HHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred eCCCCCccccccccCCCCCCCHHHHHHHHHHHHH-hCC--Cce--EEEeCCCCC-HHHHHHHHHHHHCCCCcCCceEecC
Confidence 76 23 367888888654444443 332 122 222111111 4555666666 998 77554
No 186
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=90.83 E-value=0.71 Score=46.37 Aligned_cols=174 Identities=13% Similarity=0.127 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEc----cCCCC-----hhHHHHHHHHHHHhcccccccCCccceEee------------
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAG----FPAAS-----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------ 156 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG----~p~~~-----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~------------ 156 (442)
++.+++++.+. ++|++.||+. +|... +++.+.++.+.+..+-.+ ..+..
T Consensus 33 ~~~~e~l~~aa---~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i-------~~~~~~~f~~p~~~~g~ 102 (393)
T 1xim_A 33 LDPVEAVHKLA---EIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIV-------PMVTTNLFTHPVFKDGG 102 (393)
T ss_dssp CCHHHHHHHHH---HHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGTTCS
T ss_pred CCHHHHHHHHH---HhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEE-------EEEecCCcCCcccccCC
Confidence 56777665554 5699999998 67432 345566666555433221 11111
Q ss_pred ecccch-------hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHc--CCCeEEE
Q 013498 157 LSRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSL--GCDDVEF 223 (442)
Q Consensus 157 ~~r~~~-------~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~--G~~~V~f 223 (442)
++.... +.++++++.....|.+.|.+..+..... .-...+ .+...+.+.++++++++. |+. +.+
T Consensus 103 l~spd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~--~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~-l~l 179 (393)
T 1xim_A 103 FTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAE--YDSAKDVSAALDRYREALNLLAQYSEDRGYGLR-FAI 179 (393)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEES--SGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCE-EEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCc--CCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcE-EEE
Confidence 111111 2345566666667899887764311000 000112 355667777888889888 542 444
Q ss_pred ccCCC------CCCCHHHHHHHHHHHHHcCCcE-Ee-ccCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 013498 224 SPEDA------GRSDRKFLYEILGEVIKVGATT-LN-IPDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDL 292 (442)
Q Consensus 224 ~~eda------sr~d~~~l~~~~~~~~~~Gad~-I~-laDT~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDl 292 (442)
-.... .-.+.+.+.+++ .+.+... +. .-||.=...+ ..+.+.++.+... + -...+|.++..
T Consensus 180 E~~~~~~~~~~~~~t~~~~~~ll---~~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~-~----~i~~vHl~D~~ 249 (393)
T 1xim_A 180 EPKPNEPRGDILLPTAGHAIAFV---QELERPELFGINPETGHEQMSNLNFTQGIAQALWH-K----KLFHIDLNGQH 249 (393)
T ss_dssp ECCSSSSSSEESSCSHHHHHHHH---TTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHH-T----CBCCCEECBCC
T ss_pred ecCCCCCCCCCcCCCHHHHHHHH---HHhCCccceEEEEccCCccccCCCHHHHHHHhhhc-C----CEEEEEeCCCC
Confidence 22110 113455555544 4445543 33 3376432122 2344455555411 1 23568888764
No 187
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=90.76 E-value=0.8 Score=44.89 Aligned_cols=85 Identities=14% Similarity=0.072 Sum_probs=73.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+...+ .++|-+|. +|+..-++..+..|-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpViaGvg~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 22 DGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNG--RVPLIAGVGTNDTRDSIEFVKEVA 99 (311)
T ss_dssp TSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCS--SSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999 48999999999999998765 46777776 688889999999999
Q ss_pred HhCC-CEEEecc
Q 013498 304 CAGA-RQVEVTI 314 (442)
Q Consensus 304 ~aGa-~~vd~Tv 314 (442)
++|+ +.+=...
T Consensus 100 ~~Ga~davlv~~ 111 (311)
T 3h5d_A 100 EFGGFAAGLAIV 111 (311)
T ss_dssp HSCCCSEEEEEC
T ss_pred hcCCCcEEEEcC
Confidence 9997 9876543
No 188
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=90.70 E-value=11 Score=35.35 Aligned_cols=190 Identities=20% Similarity=0.183 Sum_probs=113.7
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHH-HHHHHhcccccccCCccceEeeec
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVR-TIAKEVGNAVDAESGYVPVICGLS 158 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~-~l~~~~~~~~~~~~~l~~~i~~~~ 158 (442)
+..+|-|+ - +-.-+.++..++.+...+.|++.+-+ +|.. . ..+ .+..... + .+..+.+|-
T Consensus 21 ~~~iDht~-L-----~p~~t~~~i~~l~~~a~~~~~~aVcv-~p~~----v-~a~~~l~~~~~--v-----~v~tvigFP 81 (234)
T 1n7k_A 21 ASRIDSTL-L-----SPRATEEDVRNLVREASDYGFRCAVL-TPVY----T-VKISGLAEKLG--V-----KLCSVIGFP 81 (234)
T ss_dssp HTTEEEEC-C-----CTTCCHHHHHHHHHHHHHHTCSEEEE-CHHH----H-HHHHHHHHHHT--C-----CEEEEESTT
T ss_pred HHHhceec-c-----CCCCCHHHHHHHHHHHHHhCCCEEEE-chHH----h-eeehHhCCCCC--c-----eEEEEeCCC
Confidence 34567666 1 34468999999999999999999988 4422 2 222 2222100 1 011222331
Q ss_pred c--cc----hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCC
Q 013498 159 R--CN----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD 232 (442)
Q Consensus 159 r--~~----~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d 232 (442)
. .. ..+++.|++. |.+.|.+.+..... .+++++.+...++.+.+.|.. +-+-.|. ...+
T Consensus 82 ~G~~~~~~k~~e~~~Av~~----GAdEID~vinig~~---------~~~v~~ei~~v~~a~~~~g~~-lKvIlEt-~~L~ 146 (234)
T 1n7k_A 82 LGQAPLEVKLVEAQTVLEA----GATELDVVPHLSLG---------PEAVYREVSGIVKLAKSYGAV-VKVILEA-PLWD 146 (234)
T ss_dssp TCCSCHHHHHHHHHHHHHH----TCCEEEECCCGGGC---------HHHHHHHHHHHHHHHHHTTCE-EEEECCG-GGSC
T ss_pred CCCCcHHHHHHHHHHHHHc----CCCEEEEeccchHH---------HHHHHHHHHHHHHHHhhcCCe-EEEEEec-cCCC
Confidence 1 11 1234555554 89999988765532 227788888999999888764 5444443 3345
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcc---cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTV---GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~---G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~ 309 (442)
.+.+...++.+.++|||.|--.-.. |-++++.+.- +.+++.+. . .+...==.++ ...+++-+++||++
T Consensus 147 ~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v-~VKaaGGirt-----~~~al~~i~aGa~R 217 (234)
T 1n7k_A 147 DKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-M-GVKASGGIRS-----GIDAVLAVGAGADI 217 (234)
T ss_dssp HHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-C-EEEEESSCCS-----HHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-C-CEEEecCCCC-----HHHHHHHHHcCccc
Confidence 6889999999999999998876322 4456666443 11333332 1 1333211122 46777778999997
Q ss_pred EEe
Q 013498 310 VEV 312 (442)
Q Consensus 310 vd~ 312 (442)
|=+
T Consensus 218 iG~ 220 (234)
T 1n7k_A 218 IGT 220 (234)
T ss_dssp EEE
T ss_pred cch
Confidence 643
No 189
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=90.70 E-value=11 Score=36.49 Aligned_cols=205 Identities=9% Similarity=-0.031 Sum_probs=116.8
Q ss_pred HHHHhHcCCCEEEEcc---------CCC----ChhHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHHH
Q 013498 107 ARQLAKLGVDIIEAGF---------PAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTAW 169 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~---------p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a~ 169 (442)
++.++++|++.|=+|. |.. ..+..+.++.+++... .|.++ ||+ +...+.+..
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~---------~PviaD~d~Gyg--~~~~v~~~v 100 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASD---------VPILLDADTGYG--NFNNARRLV 100 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCS---------SCEEEECCSSCS--SHHHHHHHH
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEecCCCCCC--CHHHHHHHH
Confidence 5677888999998872 211 1122445555555321 23332 333 344555555
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhC-----CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC--CCCHHHHHHHHHH
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLR-----KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSDRKFLYEILGE 242 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~-----~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas--r~d~~~l~~~~~~ 242 (442)
..+.++|+..|++-....+-.+-+--+ .+.++.+++++.+++....-++ .|.--. |+. ....+.+.+-++.
T Consensus 101 ~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~-~i~aRt-da~~a~~g~~~ai~Ra~a 178 (295)
T 1s2w_A 101 RKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDF-CIVARV-EAFIAGWGLDEALKRAEA 178 (295)
T ss_dssp HHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTC-EEEEEE-CTTTTTCCHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCc-EEEEee-hHHhccccHHHHHHHHHH
Confidence 555678999999988765432211111 3566777776666554333233 122211 222 2346788888899
Q ss_pred HHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccC
Q 013498 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAG 322 (442)
Q Consensus 243 ~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraG 322 (442)
..++|||.|.+. .|.-.++++.++.+.+...+| +-+-. ..+|.-. .-.--+.|+++|-....+ -|+-
T Consensus 179 y~eAGAd~i~~e--~~~~~~~~~~~i~~~~~~~~P------~i~~~-~~~~~~~--~~eL~~lGv~~v~~~~~~--~raa 245 (295)
T 1s2w_A 179 YRNAGADAILMH--SKKADPSDIEAFMKAWNNQGP------VVIVP-TKYYKTP--TDHFRDMGVSMVIWANHN--LRAS 245 (295)
T ss_dssp HHHTTCSEEEEC--CCSSSSHHHHHHHHHHTTCSC------EEECC-STTTTSC--HHHHHHHTCCEEEECSHH--HHHH
T ss_pred HHHcCCCEEEEc--CCCCCHHHHHHHHHHcCCCCC------EEEeC-CCCCCCC--HHHHHHcCCcEEEEChHH--HHHH
Confidence 999999999985 144557888888887754333 32211 1123211 334456799998655444 3677
Q ss_pred cccHHHHHHHHHhcc
Q 013498 323 NASLEEVVMAFKCRG 337 (442)
Q Consensus 323 Na~lEevv~~L~~~g 337 (442)
+.++++++..|...|
T Consensus 246 ~~a~~~~~~~i~~~g 260 (295)
T 1s2w_A 246 VSAIQQTTKQIYDDQ 260 (295)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcC
Confidence 778888888887754
No 190
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=90.68 E-value=0.74 Score=42.95 Aligned_cols=195 Identities=15% Similarity=0.143 Sum_probs=100.6
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCCC----ChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.+-.++++.+.+.|++.|.+--+.. ....++.++.+++.. -.|.+..-.-.+.++++.+++ +|
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~---------~ipvi~~ggI~~~~~~~~~~~----~G 96 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI---------DIPFTVGGGIHDFETASELIL----RG 96 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC---------CSCEEEESSCCSHHHHHHHHH----TT
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC---------CCCEEEeCCCCCHHHHHHHHH----cC
Confidence 3567889999999999988732211 123456666665532 124444333235667776665 48
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EEEccC---------CCCCC--CHHHHHHHHHHH
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEFSPE---------DAGRS--DRKFLYEILGEV 243 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~--V~f~~e---------dasr~--d~~~l~~~~~~~ 243 (442)
++.|.+-.. .. . .+ +.+.+++ +..|.+. +.+.+- .-+.. +.....+.++.+
T Consensus 97 ad~V~lg~~--~l--~-----~p----~~~~~~~---~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 97 ADKVSINTA--AV--E-----NP----SLITQIA---QTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 160 (253)
T ss_dssp CSEEEESHH--HH--H-----CT----HHHHHHH---HHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEChH--HH--h-----Ch----HHHHHHH---HHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHH
Confidence 888865221 10 0 00 1122233 2333211 222221 00000 001234667777
Q ss_pred HHcCCcEEeccCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEecccccccc
Q 013498 244 IKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGER 320 (442)
Q Consensus 244 ~~~Gad~I~laDT--~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd~Tv~GlGer 320 (442)
.+.|++.|.+-++ .|..... -.++++.+++.++ +|+-. +-|.. ..+...++++||+.+-+.=.=+
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~----ipvia----~GGI~~~~d~~~~~~~Gadgv~vGsal~--- 228 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTT----LPIIA----SGGAGKMEHFLEAFLAGADAALAASVFH--- 228 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCC-CHHHHHHHGGGCC----SCEEE----ESCCCSHHHHHHHHHTTCSEEEESHHHH---
T ss_pred HHCCCCEEEEEeccCCCCCCCC-CHHHHHHHHHhcC----CCEEE----ECCCCCHHHHHHHHHcCChHHHHHHHHH---
Confidence 8899998888643 2433221 2456666776542 33433 24555 3777788889998863211101
Q ss_pred cCcccHHHHHHHHHhc
Q 013498 321 AGNASLEEVVMAFKCR 336 (442)
Q Consensus 321 aGNa~lEevv~~L~~~ 336 (442)
.+.-+.++....|+..
T Consensus 229 ~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 229 FREIDVRELKEYLKKH 244 (253)
T ss_dssp TTCSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHc
Confidence 1222677777777665
No 191
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=90.67 E-value=0.61 Score=43.19 Aligned_cols=137 Identities=13% Similarity=0.097 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceE-eeecccc-------hhhHHHHHHHH
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVI-CGLSRCN-------ERDIKTAWEAV 172 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i-~~~~r~~-------~~dI~~a~e~l 172 (442)
..-.+.++.+.++|++ ||+.......++...++.+.+..+..+. ...|.. ..++..+ .+.++.+++..
T Consensus 10 ~~l~~~l~~~~~~G~~-vEl~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A 85 (254)
T 3ayv_A 10 SRAEEALPRLQALGLG-AEVYLDPALLEEDALFQSLRRRFSGKLS---VHLPFWNLDLLSPDPEVRGLTLRRLLFGLDRA 85 (254)
T ss_dssp GGHHHHHHHHHHHTCE-EEEECCGGGTTCHHHHHHHHHHCCSCEE---EECCCTTCCTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-EEEeccccccCcHHHHHHHHHHhCCCeE---EecCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3445667778888999 9994321111111156666665421110 000100 0111111 13455666666
Q ss_pred HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHH
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVI 244 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~ 244 (442)
...|.+.|.+..+..............+..++.+.+++++|++.|+. +.+-. ....+++.+.++++.+-
T Consensus 86 ~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lEn--~~~~~~~~~~~l~~~v~ 154 (254)
T 3ayv_A 86 AELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVR-LLLEN--SHEPHPEALRPVLEAHA 154 (254)
T ss_dssp HHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCE-EEEEC--SSCSSGGGTHHHHHHHT
T ss_pred HHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCE-EEEcC--CCCCCHHHHHHHHHhcC
Confidence 77899988776443211000000112456677788888999999973 55533 22346677777776653
No 192
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=90.63 E-value=4.9 Score=36.06 Aligned_cols=158 Identities=14% Similarity=0.071 Sum_probs=86.3
Q ss_pred HHHHHHHHHhHcCCCEEEEccCCCChhH-HHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEE
Q 013498 102 EKLDIARQLAKLGVDIIEAGFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG~p~~~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v 180 (442)
+-.+.++.+.+.|++.|++..|..++.+ .+.++.+.+..... + ++.+. .++++.+.++ |.+.|
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~-----~-v~v~v------~~~~~~a~~~----gad~v 90 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY-----D-ALFFV------DDRVDVALAV----DADGV 90 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT-----T-CEEEE------ESCHHHHHHH----TCSEE
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc-----C-CeEEE------cChHHHHHHc----CCCEE
Confidence 4567788999999999999988666544 44555554432110 1 12221 2566766665 88988
Q ss_pred EEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec---cCcc
Q 013498 181 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---PDTV 257 (442)
Q Consensus 181 ~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l---aDT~ 257 (442)
++- ..+. +. +.+ +..+ .++ .+.+.+ .+++.+ ..+.+.|+|.|.+ -+|.
T Consensus 91 ~l~--~~~~--------~~----~~~----~~~~-~~~-~~~v~~-----~t~~e~----~~~~~~g~d~i~~~~~~~~~ 141 (215)
T 1xi3_A 91 QLG--PEDM--------PI----EVA----KEIA-PNL-IIGASV-----YSLEEA----LEAEKKGADYLGAGSVFPTK 141 (215)
T ss_dssp EEC--TTSC--------CH----HHH----HHHC-TTS-EEEEEE-----SSHHHH----HHHHHHTCSEEEEECSSCC-
T ss_pred EEC--CccC--------CH----HHH----HHhC-CCC-EEEEec-----CCHHHH----HHHHhcCCCEEEEcCCccCC
Confidence 753 2111 11 111 1112 344 244443 234443 3356789999875 3332
Q ss_pred cc--cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 258 GI--TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 258 G~--~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
+. ..|.. .+.++.+++..+ +++.. .-|....|.-.++++|++.|.+.
T Consensus 142 ~~~~~~~~~-~~~l~~l~~~~~----~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 142 TKEDARVIG-LEGLRKIVESVK----IPVVA----IGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp ---CCCCCH-HHHHHHHHHHCS----SCEEE----ESSCCTTTHHHHHTTTCSEEEES
T ss_pred CCCCCCCcC-HHHHHHHHHhCC----CCEEE----ECCcCHHHHHHHHHcCCCEEEEh
Confidence 11 12222 345566666542 33433 24666668888888999998754
No 193
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=90.62 E-value=3.5 Score=39.95 Aligned_cols=127 Identities=20% Similarity=0.199 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHH
Q 013498 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 207 (442)
Q Consensus 129 d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~ 207 (442)
.++.++++++. + .|++.--+. +..+|++.+++.+...|.+.|.+.-..+. ++... ..++ .
T Consensus 123 n~~LLr~va~~-g---------kPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~------y~~~~-~~vd--l 183 (285)
T 3sz8_A 123 QTDLVVAIAKA-G---------KPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSS------FGYDN-LVVD--M 183 (285)
T ss_dssp CHHHHHHHHHT-S---------SCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEE------CSSSC-EECC--T
T ss_pred CHHHHHHHHcc-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCC------CCCCc-CccC--H
Confidence 35677776653 1 244544333 47889999999988888887766533331 11100 0000 1
Q ss_pred HHHHHHHHc--CCCeEEEccCCC----------CCCCHHHHHHHHHHHHHcCCcEE----------eccCcccccCHHHH
Q 013498 208 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTL----------NIPDTVGITMPTEF 265 (442)
Q Consensus 208 ~~v~~ar~~--G~~~V~f~~eda----------sr~d~~~l~~~~~~~~~~Gad~I----------~laDT~G~~~P~~v 265 (442)
..+...|+. |+. |.|.+.-+ +--..+++..++.+++.+||+.+ .++|-.=.+.|+++
T Consensus 184 ~~i~~lk~~~~~~p-V~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el 262 (285)
T 3sz8_A 184 LGFRQMAETTGGCP-VIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQL 262 (285)
T ss_dssp THHHHHHHHTTSCC-EEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGH
T ss_pred HHHHHHHHhCCCCC-EEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHH
Confidence 233344555 776 77743221 11345788899999999999933 35788889999999
Q ss_pred HHHHHHHHHh
Q 013498 266 GKLIADIKAN 275 (442)
Q Consensus 266 ~~li~~l~~~ 275 (442)
.++++.+++.
T Consensus 263 ~~lv~~i~~i 272 (285)
T 3sz8_A 263 EGLLSQMKAI 272 (285)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998863
No 194
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.60 E-value=6.3 Score=37.00 Aligned_cols=114 Identities=12% Similarity=-0.000 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCc-------------------ccccCHHHHHHH
Q 013498 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT-------------------VGITMPTEFGKL 268 (442)
Q Consensus 208 ~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT-------------------~G~~~P~~v~~l 268 (442)
+..+.+|+.|-..+...+ -.+..+.+...+.++.+.+.|+|.|-|... .+-+++....++
T Consensus 7 ~~~~~~~~~~~~~~~~~i-~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~ 85 (262)
T 1rd5_A 7 DTMAALMAKGKTAFIPYI-TAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEM 85 (262)
T ss_dssp HHHHHHHHTTCCEEEEEE-ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEe-eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHH
Confidence 344445555543222222 134455688899999999999999888542 233578889999
Q ss_pred HHHHHHhCCCCcceeEEEeecCC----cchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhcc
Q 013498 269 IADIKANTPGIENVVISTHCQND----LGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 269 i~~l~~~~p~~~~v~i~~H~HND----lGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
++.+++.+ ++|+.+=...| .|+. .+.++||+.|...-..+ ..+++++..++..|
T Consensus 86 i~~ir~~~----~~Pv~~m~~~~~~~~~~~~-----~a~~aGadgv~v~d~~~------~~~~~~~~~~~~~g 143 (262)
T 1rd5_A 86 LREVTPEL----SCPVVLLSYYKPIMFRSLA-----KMKEAGVHGLIVPDLPY------VAAHSLWSEAKNNN 143 (262)
T ss_dssp HHHHGGGC----SSCEEEECCSHHHHSCCTH-----HHHHTTCCEEECTTCBT------TTHHHHHHHHHHTT
T ss_pred HHHHHhcC----CCCEEEEecCcHHHHHHHH-----HHHHcCCCEEEEcCCCh------hhHHHHHHHHHHcC
Confidence 99999874 25543311111 1221 28899999987643322 23556666555543
No 195
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=90.60 E-value=2.7 Score=41.99 Aligned_cols=129 Identities=12% Similarity=0.095 Sum_probs=80.6
Q ss_pred HHHhCCCCEEEEeecCC--------hH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCC-C-----CCC
Q 013498 171 AVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPED-A-----GRS 231 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~S--------d~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~ed-a-----sr~ 231 (442)
..+++|.+.|.+..+.. +. +....+|-+.+.-.+.+.+.++.+|+. |- . .|.+++.+ . ...
T Consensus 169 ~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~ 248 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPN 248 (364)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTT
T ss_pred HHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCC
Confidence 34668999999876531 11 111235556677677777778877765 31 1 24556642 1 244
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCcc---cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-C
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTV---GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-A 307 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~---G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a 307 (442)
+.+...++++.+.++|+|.|.+.... +...| .++++.+++.++ ++|..=. +. -..++..+++.| |
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~---~~~~~~v~~~~~----iPvi~~G--gi--t~~~a~~~l~~g~a 317 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGKPYS---EAFRQKVRERFH----GVIIGAG--AY--TAEKAEDLIGKGLI 317 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC---HHHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc---HHHHHHHHHHCC----CCEEEEC--Cc--CHHHHHHHHHCCCc
Confidence 67788899999999999999886521 01112 356778888874 4444322 22 266778888887 7
Q ss_pred CEE
Q 013498 308 RQV 310 (442)
Q Consensus 308 ~~v 310 (442)
|.|
T Consensus 318 D~V 320 (364)
T 1vyr_A 318 DAV 320 (364)
T ss_dssp SEE
T ss_pred cEE
Confidence 776
No 196
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=90.56 E-value=0.87 Score=44.11 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=54.1
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeccC-cc--c---ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV--G---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~laD-T~--G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
|.++. +++.+.+.++...+.|||.|-+.= ++ | +...+++.+++..++..... +++|++++.+ -.-+
T Consensus 21 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~~-----~~va 93 (280)
T 1eye_A 21 DGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTMR-----ADVA 93 (280)
T ss_dssp SSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECSC-----HHHH
T ss_pred CCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCCC-----HHHH
Confidence 55654 789999999999999999987762 21 2 33345666666555443211 3789999987 4566
Q ss_pred HHHHHhCCCEEEeccc
Q 013498 300 IAGACAGARQVEVTIN 315 (442)
Q Consensus 300 laAl~aGa~~vd~Tv~ 315 (442)
.+|+++|++.|+-.-+
T Consensus 94 ~aAl~aGa~iINdvsg 109 (280)
T 1eye_A 94 RAALQNGAQMVNDVSG 109 (280)
T ss_dssp HHHHHTTCCEEEETTT
T ss_pred HHHHHcCCCEEEECCC
Confidence 7999999999976544
No 197
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.48 E-value=1 Score=44.21 Aligned_cols=85 Identities=14% Similarity=0.080 Sum_probs=73.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
....|.+-+.++++.+++.|++.|.++-|+|= ++.++-.++++.+.+...+ .++|-+++ +|+.--++..+..|-
T Consensus 39 dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 39 DGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH--RVPTIVSVSDLTTAKTVRRAQFAE 116 (315)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999986 7899999999999887654 46677776 688999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=...
T Consensus 117 ~~Gadavlv~~ 127 (315)
T 3na8_A 117 SLGAEAVMVLP 127 (315)
T ss_dssp HTTCSEEEECC
T ss_pred hcCCCEEEECC
Confidence 99999987653
No 198
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=90.44 E-value=1.7 Score=42.83 Aligned_cols=72 Identities=17% Similarity=0.236 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHH----HHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC
Q 013498 234 KFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLI----ADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 306 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li----~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG 306 (442)
+.+.+.++...++|+|.|.+.|+.|. +.|..+.+++ +.+.+.+. +++ .+|+.-+.+.-+ . .-.+.|
T Consensus 190 ~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~---~~~-iih~~g~~~~~l-~--~~~~~g 262 (348)
T 4ay7_A 190 EASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN---SVT-VLHICGNVNPIL-S--DMADCG 262 (348)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS---SEE-EEECCSCCHHHH-H--HHHTSC
T ss_pred HHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc---CCc-EEEecCCcHHHH-H--HHHHhc
Confidence 34555666777899999999999875 8999988765 44445554 244 367775443222 1 223579
Q ss_pred CCEEEe
Q 013498 307 ARQVEV 312 (442)
Q Consensus 307 a~~vd~ 312 (442)
++.++.
T Consensus 263 ~d~i~~ 268 (348)
T 4ay7_A 263 FEGLSV 268 (348)
T ss_dssp CSEEEC
T ss_pred cccccc
Confidence 988753
No 199
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=90.43 E-value=9.1 Score=36.96 Aligned_cols=109 Identities=16% Similarity=0.078 Sum_probs=71.7
Q ss_pred EccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccC---HH---HHHHHHHHHHHhCCCCc-ceeEEEeecCCcchH
Q 013498 223 FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITM---PT---EFGKLIADIKANTPGIE-NVVISTHCQNDLGLS 295 (442)
Q Consensus 223 f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~---P~---~v~~li~~l~~~~p~~~-~v~i~~H~HNDlGLA 295 (442)
.+++. +..+.+--..-++.+++.|||.|-+.=-.|.+. -. .+.+-|..+++..++.. ++.|+.-.=+|.-.=
T Consensus 96 igFP~-G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~e~i 174 (281)
T 2a4a_A 96 INFPY-GTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLI 174 (281)
T ss_dssp ESTTT-CCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSHHHH
T ss_pred eCCCC-CCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHH
Confidence 35543 445666666667788889999988777777443 34 67777888887664321 223444334554433
Q ss_pred HHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHh
Q 013498 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (442)
Q Consensus 296 ~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~ 335 (442)
..-+..|+++|||+|-+|.+ . ..|++.+|++..+.+.
T Consensus 175 ~~A~~ia~eaGADfVKTSTG-f--~~~gAT~edv~lm~~~ 211 (281)
T 2a4a_A 175 IKTTLAVLNGNADFIKTSTG-K--VQINATPSSVEYIIKA 211 (281)
T ss_dssp HHHHHHHHTTTCSEEECCCS-C--SSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCC-C--CCCCCCHHHHHHHHHH
Confidence 45677899999999999852 2 2478999988766654
No 200
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.41 E-value=2.2 Score=40.55 Aligned_cols=142 Identities=19% Similarity=0.098 Sum_probs=101.0
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc---CCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP---EDAGRSDRKFLYEILGEVIKVGATTLN 252 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~---edasr~d~~~l~~~~~~~~~~Gad~I~ 252 (442)
=+|.+.+--.+|-++- + +.+++.++.++++|+ +|+.+- |.+-.. ..+.++++.+.+.|-+.|-
T Consensus 38 yID~lKfg~Gt~~l~~--------~---~~l~eki~l~~~~gV-~v~~GGTl~E~~~~q--g~~~~yl~~~k~lGf~~iE 103 (251)
T 1qwg_A 38 YIDFVKFGWGTSAVID--------R---DVVKEKINYYKDWGI-KVYPGGTLFEYAYSK--GKFDEFLNECEKLGFEAVE 103 (251)
T ss_dssp GCSEEEECTTGGGGSC--------H---HHHHHHHHHHHTTTC-EEEECHHHHHHHHHT--TCHHHHHHHHHHHTCCEEE
T ss_pred hcceEEecCceeeecC--------H---HHHHHHHHHHHHcCC-eEECCcHHHHHHHHc--CcHHHHHHHHHHcCCCEEE
Confidence 4677877666664322 2 335688999999998 488754 211111 1566778888899999999
Q ss_pred ccCcccccCHHHHHHHHHHHHHh-CCCCcceeEEEeec-------CCcchHHHHHHHHHHhCCCEE--Ee----cccccc
Q 013498 253 IPDTVGITMPTEFGKLIADIKAN-TPGIENVVISTHCQ-------NDLGLSTANTIAGACAGARQV--EV----TINGIG 318 (442)
Q Consensus 253 laDT~G~~~P~~v~~li~~l~~~-~p~~~~v~i~~H~H-------NDlGLA~ANalaAl~aGa~~v--d~----Tv~GlG 318 (442)
+.|-.-.+.+++-.++|+.+++. + .+.-++.-- -+...-+..+...++|||++| ++ +..|+=
T Consensus 104 iS~G~i~l~~~~~~~~I~~~~~~G~----~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~ 179 (251)
T 1qwg_A 104 ISDGSSDISLEERNNAIKRAKDNGF----MVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLF 179 (251)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHTTC----EEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTB
T ss_pred ECCCcccCCHHHHHHHHHHHHHCCC----EEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccC
Confidence 99999999999999999999987 3 244444332 234556678889999999996 33 223777
Q ss_pred cccCcccHHHHHHHHHh
Q 013498 319 ERAGNASLEEVVMAFKC 335 (442)
Q Consensus 319 eraGNa~lEevv~~L~~ 335 (442)
+..||.-.+.+-..+..
T Consensus 180 ~~~g~~r~d~v~~i~~~ 196 (251)
T 1qwg_A 180 DKEGKVKENELDVLAKN 196 (251)
T ss_dssp CTTSCBCHHHHHHHHTT
T ss_pred CCCCCCcHHHHHHHHHh
Confidence 89999998877555554
No 201
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=90.24 E-value=13 Score=35.64 Aligned_cols=177 Identities=18% Similarity=0.186 Sum_probs=106.5
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEcc--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKT 167 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~--p~~~~--------~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~ 167 (442)
=+.++.+++++.+.++|.+.+=.++ |..++ +.++.+++.++.. ++ +.++ .-...+.++.
T Consensus 49 ~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--------Gl-~~~t--e~~d~~~~~~ 117 (276)
T 1vs1_A 49 ESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--------GL-PVVT--EVLDPRHVET 117 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-CEEE--ECCCGGGHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--------CC-cEEE--ecCCHHHHHH
Confidence 3899999999999999999987764 33333 2344444444433 22 2222 2235666665
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
..+. ++.+.| +..+. +- . .+++++.+.|.. |.+.- +.-.+++.+...++.+...|
T Consensus 118 l~~~-----vd~~kI--gs~~~--------~n---~----~ll~~~a~~~kP-V~lk~--G~~~t~~ei~~Ave~i~~~G 172 (276)
T 1vs1_A 118 VSRY-----ADMLQI--GARNM--------QN---F----PLLREVGRSGKP-VLLKR--GFGNTVEELLAAAEYILLEG 172 (276)
T ss_dssp HHHH-----CSEEEE--CGGGT--------TC---H----HHHHHHHHHTCC-EEEEC--CTTCCHHHHHHHHHHHHHTT
T ss_pred HHHh-----CCeEEE--Ccccc--------cC---H----HHHHHHHccCCe-EEEcC--CCCCCHHHHHHHHHHHHHcC
Confidence 5443 466655 32221 11 1 234445567876 77753 23357888989999999999
Q ss_pred CcEEeccCccc----ccCHHHHHHH-HHHHHHhCCCCcceeEEE---eecCCcchHHHHHHHHHHhCCC--EEEecc
Q 013498 248 ATTLNIPDTVG----ITMPTEFGKL-IADIKANTPGIENVVIST---HCQNDLGLSTANTIAGACAGAR--QVEVTI 314 (442)
Q Consensus 248 ad~I~laDT~G----~~~P~~v~~l-i~~l~~~~p~~~~v~i~~---H~HNDlGLA~ANalaAl~aGa~--~vd~Tv 314 (442)
...+.|+.--+ ...++.+.-. +..+++.+. ++|.+ |.=.+.-+...-+++|+..||+ .|+.=+
T Consensus 173 n~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~----lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 173 NWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATH----LPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBS----SCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhC----CCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 87777766211 1233444333 677887652 44633 4433334556778889999999 887755
No 202
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.20 E-value=3.1 Score=41.19 Aligned_cols=132 Identities=13% Similarity=0.026 Sum_probs=81.8
Q ss_pred HHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCCC--CCCCHHHHH
Q 013498 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDA--GRSDRKFLY 237 (442)
Q Consensus 172 l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~eda--sr~d~~~l~ 237 (442)
.+.+|.|.|.+..+- |+. +....+|-+.+.-.+.+.+.++.+|+. .+. .|.+++.+. ...+.+...
T Consensus 153 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~ 232 (340)
T 3gr7_A 153 AKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYV 232 (340)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHH
T ss_pred HHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHH
Confidence 456799999988763 332 222345667776666677777777765 222 356676432 124567788
Q ss_pred HHHHHHHHcCCcEEeccCcc--cc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 013498 238 EILGEVIKVGATTLNIPDTV--GI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT~--G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~~v 310 (442)
++++.+.++|+|.|.+.+.. .. ..|....++++.+++.+. ++|..=.--. -...+..+++.| ||.|
T Consensus 233 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~----iPVi~~GgI~---s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 233 PYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD----IPTGAVGLIT---SGWQAEEILQNGRADLV 304 (340)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT----CCEEEESSCC---CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC----CcEEeeCCCC---CHHHHHHHHHCCCeeEE
Confidence 99999999999999987521 10 112224567888888773 4444322110 245567788888 7766
No 203
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.15 E-value=2.2 Score=40.65 Aligned_cols=129 Identities=14% Similarity=0.121 Sum_probs=77.2
Q ss_pred hCCCCEEEEee-cCChHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 174 YAKRPRIHTFI-ATSGIHMEHK-LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 174 ~~g~~~v~i~~-~~Sd~h~~~~-l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
.+|++.|.+.. +++-.+=... ...|.++.+..++..++-+ ... |...+++.+-.++ .+.++++.++|+..|
T Consensus 38 ~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~p-viaD~~~Gyg~~~---~~~~~~l~~aGa~gv 110 (255)
T 2qiw_A 38 EAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV---SIP-VSVDVESGYGLSP---ADLIAQILEAGAVGI 110 (255)
T ss_dssp HTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC---SSC-EEEECTTCTTCCH---HHHHHHHHHTTCCEE
T ss_pred HcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC---CCC-EEeccCCCcCcHH---HHHHHHHHHcCCcEE
Confidence 46888776542 2221100000 1357788887776655443 344 7777776644455 788888889999999
Q ss_pred eccCcc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc------------chHHHHHHHHHHhCCCEE
Q 013498 252 NIPDTV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDL------------GLSTANTIAGACAGARQV 310 (442)
Q Consensus 252 ~laDT~-----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDl------------GLA~ANalaAl~aGa~~v 310 (442)
.|-|.. ....++++.+.|+.+++.-... ++++-+=.|.|. --++.-+.+..+|||+.|
T Consensus 111 ~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~-g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i 185 (255)
T 2qiw_A 111 NVEDVVHSEGKRVREAQEHADYIAAARQAADVA-GVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSV 185 (255)
T ss_dssp EECSEEGGGTTEECCHHHHHHHHHHHHHHHHHH-TCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEE
T ss_pred EECCCCCCCCCcccCHHHHHHHHHHHHHHHHhc-CCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEE
Confidence 999997 2356678888998888762100 023333344442 234455556666666665
No 204
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=90.14 E-value=14 Score=36.15 Aligned_cols=195 Identities=15% Similarity=0.070 Sum_probs=119.1
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHhHcCCCEEEEccCCC----ChhHHHHHHHHHHHhcccccccCCccceEe--eeccc
Q 013498 89 DGEQSPG--ATLTSKEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVIC--GLSRC 160 (442)
Q Consensus 89 DG~Q~~g--~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~--~~~r~ 160 (442)
.+.+..+ ...+.+....+++.-.+++-+.|=-.++.. ...-...++.+++.. -+|+.. .++ .
T Consensus 24 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~---------~VPVaLHlDHg-~ 93 (306)
T 3pm6_A 24 THSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAA---------SVPITLHLDHA-Q 93 (306)
T ss_dssp HTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHC---------SSCEEEEEEEE-C
T ss_pred HCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHC---------CCCEEEEcCCC-C
Confidence 4555544 246889999999999999999764333321 111123444444431 135433 333 2
Q ss_pred chhhHHHHHHH----HHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------ccCC---
Q 013498 161 NERDIKTAWEA----VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPED--- 227 (442)
Q Consensus 161 ~~~dI~~a~e~----l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f------~~ed--- 227 (442)
..+.+..++++ ....|...|.+ -.| ..+.+|+++..++.+++|+..|+ .|+. +-||
T Consensus 94 ~~e~i~~ai~~~~~~~~~~GFtSVMi--DgS--------~~p~eENi~~Tk~vv~~ah~~gv-sVEaElG~igG~Edgv~ 162 (306)
T 3pm6_A 94 DPEIIKRAADLSRSETHEPGFDSIMV--DMS--------HFSKEENLRLTRELVAYCNARGI-ATEAEPGRIEGGEDGVQ 162 (306)
T ss_dssp CHHHHHHHHHTC------CCCSEEEE--CCT--------TSCHHHHHHHHHHHHHHHHTTTC-EEEECSSBCCCCBTTBC
T ss_pred CHHHHHHHHHhhhhccCCCCCCEEEE--eCC--------CCCHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeccccCCcc
Confidence 45566666653 00126766543 333 34678999999999999999998 4653 1233
Q ss_pred ------CCCCCHHHHHHHHHHHHHcCCcEEecc--CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 228 ------AGRSDRKFLYEILGEVIKVGATTLNIP--DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 228 ------asr~d~~~l~~~~~~~~~~Gad~I~la--DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
...+||+...+++ +.|+|.+-++ -.=|... |.-=.++++.+++.++. ++||.+|.= -|...
T Consensus 163 ~~~~~~~~yT~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~--~vpLVlHGg--SG~p~ 234 (306)
T 3pm6_A 163 DTVDLEGVLTTPEESEEFV----ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGE--RVGLVLHGA--DPFTK 234 (306)
T ss_dssp CCTTCCCBCCCHHHHHHHH----TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTT--TSEEEECSC--TTCCH
T ss_pred ccccccccCCCHHHHHHHH----HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCC--CCCEEeeCC--CCCCH
Confidence 2368999888776 4799954443 2224433 22235667777777632 377887764 46667
Q ss_pred HHHHHHHHhCCCEEEe
Q 013498 297 ANTIAGACAGARQVEV 312 (442)
Q Consensus 297 ANalaAl~aGa~~vd~ 312 (442)
..-..|+..|+.-|+.
T Consensus 235 e~i~~ai~~GV~KiNi 250 (306)
T 3pm6_A 235 EIFEKCIERGVAKVNV 250 (306)
T ss_dssp HHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHcCCeEEEe
Confidence 7888999999887754
No 205
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=90.11 E-value=4.8 Score=39.58 Aligned_cols=136 Identities=13% Similarity=0.027 Sum_probs=83.3
Q ss_pred HHHHHHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCC--CCCCCH
Q 013498 168 AWEAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPED--AGRSDR 233 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~ed--asr~d~ 233 (442)
+.+..+++|.+.|.+..+. |+. +....+|-+.+.-.+.+.+.++.+|+. .+. .|.+++.+ ....+.
T Consensus 149 aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~ 228 (338)
T 1z41_A 149 AAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDI 228 (338)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCH
T ss_pred HHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCH
Confidence 3344566899999887653 121 112234556666666677777777665 332 25566643 124567
Q ss_pred HHHHHHHHHHHHcCCcEEeccCccc--c---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhC-
Q 013498 234 KFLYEILGEVIKVGATTLNIPDTVG--I---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAG- 306 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT~G--~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL-A~ANalaAl~aG- 306 (442)
+...++++.+.++|+|.|.+.+..- . ..|....++++.+++.+. ++|..=. |. -...+..+++.|
T Consensus 229 ~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~G----gi~s~~~a~~~l~~G~ 300 (338)
T 1z41_A 229 ADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD----MATGAVG----MITDGSMAEEILQNGR 300 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC----CEEEECS----SCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC----CCEEEEC----CCCCHHHHHHHHHcCC
Confidence 8889999999999999999876421 1 122223567778887763 4554321 22 246677788888
Q ss_pred CCEEE
Q 013498 307 ARQVE 311 (442)
Q Consensus 307 a~~vd 311 (442)
||.|-
T Consensus 301 aD~V~ 305 (338)
T 1z41_A 301 ADLIF 305 (338)
T ss_dssp CSEEE
T ss_pred ceEEe
Confidence 88763
No 206
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.09 E-value=7.5 Score=38.42 Aligned_cols=140 Identities=10% Similarity=0.040 Sum_probs=81.0
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCC-hHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEE----ccCCCCCCCHH
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATS-GIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEF----SPEDAGRSDRK 234 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~S-d~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f----~~edasr~d~~ 234 (442)
..+++..+.+.+..+|.+.|.+..++. .......+|-+...-.+.+.++++.+++. ++. |.+ +..+. .+.+
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~P-V~vKiR~g~~~~--~~~~ 144 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVP-VTVKMRLGLEGK--ETYR 144 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSC-EEEEEESCBTTC--CCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCc-eEEEEecCcCcc--ccHH
Confidence 467777777777788999988876422 12222334433333334455555555553 554 443 33222 3456
Q ss_pred HHHHHHHHHHHcCCcEEeccCccc--ccCHH-------HHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHH
Q 013498 235 FLYEILGEVIKVGATTLNIPDTVG--ITMPT-------EFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGAC 304 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~laDT~G--~~~P~-------~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~ 304 (442)
...++++.+.++|++.|.+-+-.. ...+. ...+++..+++.+|+ ++|..=. |.. ...+..+++
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~---iPVianG----gI~s~eda~~~l~ 217 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQ---LTFVTNG----GIRSLEEALFHLK 217 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTT---SEEEEES----SCCSHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCC---CeEEEEC----CcCCHHHHHHHHh
Confidence 788999999999999999876331 11221 135788899988863 5555433 221 233444554
Q ss_pred hCCCEEE
Q 013498 305 AGARQVE 311 (442)
Q Consensus 305 aGa~~vd 311 (442)
||+.|-
T Consensus 218 -GaD~V~ 223 (350)
T 3b0p_A 218 -RVDGVM 223 (350)
T ss_dssp -TSSEEE
T ss_pred -CCCEEE
Confidence 888763
No 207
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=90.01 E-value=1.2 Score=43.10 Aligned_cols=80 Identities=19% Similarity=0.198 Sum_probs=55.2
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeccC-cc--cc---cCHHHH---HHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV--GI---TMPTEF---GKLIADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~laD-T~--G~---~~P~~v---~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
|+++. +++.+.+.++...+.|||.|-+.= ++ |. ...++. ..+|+.+++.+ +++|++++.+ .
T Consensus 30 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~----~~piSIDT~~-----~ 100 (282)
T 1aj0_A 30 DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF----EVWISVDTSK-----P 100 (282)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC----CCEEEEECCC-----H
T ss_pred cccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc----CCeEEEeCCC-----H
Confidence 45544 578888888999999999887753 32 31 113444 45556666655 3789999988 4
Q ss_pred HHHHHHHHhCCCEEEeccc
Q 013498 297 ANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 297 ANalaAl~aGa~~vd~Tv~ 315 (442)
.-+.+|+++|++.|+-.-+
T Consensus 101 ~va~aAl~aGa~iINdvsg 119 (282)
T 1aj0_A 101 EVIRESAKVGAHIINDIRS 119 (282)
T ss_dssp HHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEECCC
Confidence 5567899999999975443
No 208
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.95 E-value=14 Score=35.39 Aligned_cols=191 Identities=16% Similarity=0.157 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHH
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (442)
+..+.-.++++.|.+.|++-|=+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-.
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------gr~pviaGvg~~~t~~ai~la~~ 90 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-------GRVQVIAGAGSNCTEEAIELSVF 90 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSSHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEeCCCCCHHHHHHHHHH
Confidence 67788889999999999998876 4 455566664 45555555542 2357888877655444 444433
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcCC
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVGA 248 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~Ga 248 (442)
.+.+|++.+-+..|-. ++.|.++.++-..+.++ ..+++-+-++.+. ....+++.+.++++ +. .
T Consensus 91 -a~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~ia~---a~~lPiilYn~P~~tg~~l~~~~~~~La~---~~-p 155 (289)
T 2yxg_A 91 -AEDVGADAVLSITPYY-------NKPTQEGLRKHFGKVAE---SINLPIVLYNVPSRTAVNLEPKTVKLLAE---EY-S 155 (289)
T ss_dssp -HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHH---HCSSCEEEEECHHHHSCCCCHHHHHHHHH---HC-T
T ss_pred -HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCccccCcCCCHHHHHHHHH---hC-C
Confidence 3456999887765532 23466776666655544 3355534555432 34567787777763 22 6
Q ss_pred cEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHH
Q 013498 249 TTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEE 328 (442)
Q Consensus 249 d~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEe 328 (442)
..+.+.||.|-. .++.++++.. + ..+ +-.+++ ..+.++..|++.+ +.| .+|...+.
T Consensus 156 nivgiK~s~gd~--~~~~~~~~~~-----~---f~v-~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P~~ 211 (289)
T 2yxg_A 156 NISAVKEANPNL--SQVSELIHDA-----K---ITV-LSGNDE------LTLPIIALGGKGV---ISV----VANIVPKE 211 (289)
T ss_dssp TEEEEEECCSCT--HHHHHHHHHT-----C---SEE-EESCGG------GHHHHHHTTCCEE---EES----GGGTCHHH
T ss_pred CEEEEEeCCCCH--HHHHHHHHhC-----C---eEE-EECcHH------HHHHHHHCCCCEE---EeC----hhhhhHHH
Confidence 789999999853 4555555432 2 122 334443 2456778897643 222 45677777
Q ss_pred HHHHHH
Q 013498 329 VVMAFK 334 (442)
Q Consensus 329 vv~~L~ 334 (442)
++...+
T Consensus 212 ~~~l~~ 217 (289)
T 2yxg_A 212 FVEMVN 217 (289)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 209
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=89.93 E-value=0.73 Score=43.69 Aligned_cols=162 Identities=22% Similarity=0.194 Sum_probs=111.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhccc-cccc---CCc--------cceEeeecc------
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNA-VDAE---SGY--------VPVICGLSR------ 159 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~-~~~~---~~l--------~~~i~~~~r------ 159 (442)
-+.|+-++-.+...+.....+-+|-.+-.|..|..+-.++...... +.+. .++ -..+.++.+
T Consensus 70 ~tve~AV~~mk~y~~~~~~avSVGLGaGDP~Q~~~Va~IA~~~~P~HVNQVFtgag~trg~L~~~~T~VNaLVSPTG~~G 149 (275)
T 3m6y_A 70 PTVEEAVTAMKAYGKEIDDAVSIGLGAGDNRQAAVVAEIAKHYPGSHINQVFPSVGATRANLGEKDSWINSLVSPTGKVG 149 (275)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEECCTTCGGGHHHHHHHTTTCCCSEECCBGGGHHHHHHHHTTCCCEEEEEEBCCSSTT
T ss_pred CCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHhhcCCCccEEEEEEcCCCCcc
Confidence 4678888888888888877799988777788888888777653211 1100 000 001122111
Q ss_pred -----------cc----hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 013498 160 -----------CN----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (442)
Q Consensus 160 -----------~~----~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~ 224 (442)
.. .-.++.|+..++..|.+.|.+| |.-- . ..+++++.+++.|.+.|+ .
T Consensus 150 ~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKff-PM~G--------l---~~leEl~avAkAca~~g~---~-- 212 (275)
T 3m6y_A 150 YVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYF-PMKG--------L---AHEEEYRAVAKACAEEGF---A-- 212 (275)
T ss_dssp EEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEEC-CCTT--------T---TTHHHHHHHHHHHHHHTC---E--
T ss_pred eEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEe-ecCC--------c---ccHHHHHHHHHHHHHcCc---e--
Confidence 11 1247889999999999999876 3321 1 224566677777888886 2
Q ss_pred cCCCCCCCHHHHHHHHHHHHHcCCcEE----e--ccC-cccccCHHHHHHHHHHHHHhC
Q 013498 225 PEDAGRSDRKFLYEILGEVIKVGATTL----N--IPD-TVGITMPTEFGKLIADIKANT 276 (442)
Q Consensus 225 ~edasr~d~~~l~~~~~~~~~~Gad~I----~--laD-T~G~~~P~~v~~li~~l~~~~ 276 (442)
+|-++-.|.+.+.++++.+.++|+..| | +-| ..|...|+++++|+..+++.+
T Consensus 213 lEPTGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~ 271 (275)
T 3m6y_A 213 LEPTGGIDKENFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLV 271 (275)
T ss_dssp EEEBSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHH
T ss_pred ECCCCCccHhHHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHH
Confidence 345778888999999999999998754 2 333 569999999999999999865
No 210
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=89.90 E-value=15 Score=35.68 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCccc-c--------------c-C---HHHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVG-I--------------T-M---PTEFGKLIADIKANTPGIENVVISTHCQND 291 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G-~--------------~-~---P~~v~~li~~l~~~~p~~~~v~i~~H~HND 291 (442)
.+.+.+.++++.+.++|+|.|.+..|.. . + - ....-++++.+++.+++ +++|-.=.--.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~--~ipVi~~GGI~ 299 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNG--RLPIIGVGGID 299 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTT--SSCEEEESSCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCC--CCCEEEECCCC
Confidence 5567888999999999999999887641 1 1 1 11223667777776642 24444332222
Q ss_pred cchHHHHHHHHHHhCCCEEE
Q 013498 292 LGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 292 lGLA~ANalaAl~aGa~~vd 311 (442)
. -..+..++.+||+.|.
T Consensus 300 ~---~~da~~~l~~GAd~V~ 316 (336)
T 1f76_A 300 S---VIAAREKIAAGASLVQ 316 (336)
T ss_dssp S---HHHHHHHHHHTCSEEE
T ss_pred C---HHHHHHHHHCCCCEEE
Confidence 2 2345566667888774
No 211
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=89.80 E-value=2.8 Score=41.87 Aligned_cols=129 Identities=11% Similarity=0.047 Sum_probs=78.8
Q ss_pred HHHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCCC-----CCCC
Q 013498 171 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRSD 232 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~eda-----sr~d 232 (442)
..+.+|.+.|.+..+. |+. +....+|-+.+.-.+.+.+.++.+|+. |. . .|.+++.+. ...+
T Consensus 169 ~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCC
Confidence 3466899999987643 121 112234556665556666666666653 31 1 355566321 2345
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcc--c-ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CC
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTV--G-ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-AR 308 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~--G-~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~ 308 (442)
.+...++++.+.++|+|.|.+.... | ...|. ++++.+++.++ ++|..=. +. -..++..++++| |+
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~----iPvi~~G--gi--~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQ----GVLIYAG--RY--NAEKAEQAINDGLAD 317 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCC----CcEEEeC--CC--CHHHHHHHHHCCCcc
Confidence 6788899999999999999886532 1 11233 56788888874 4443322 22 256778888888 88
Q ss_pred EE
Q 013498 309 QV 310 (442)
Q Consensus 309 ~v 310 (442)
.|
T Consensus 318 ~V 319 (365)
T 2gou_A 318 MI 319 (365)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 212
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=89.74 E-value=0.87 Score=42.21 Aligned_cols=169 Identities=17% Similarity=0.188 Sum_probs=88.4
Q ss_pred HHHHHHHHHhHcCCCEEEE----ccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 102 EKLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEv----G~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+-.++++.+.+.|++.|.+ |+....... +.++.+++... .|.+....-.+.++++.+++ +|+
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~---------ipv~v~ggi~~~~~~~~~l~----~Ga 97 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD---------VQVELSGGIRDDESLAAALA----TGC 97 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS---------SEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC---------CcEEEECCCCCHHHHHHHHH----cCC
Confidence 5678899999999999998 222223334 77888776531 24444333235567776665 488
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eEEEccC----C---CCC----CCHHHHHHHHHHHHH
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPE----D---AGR----SDRKFLYEILGEVIK 245 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~-~V~f~~e----d---asr----~d~~~l~~~~~~~~~ 245 (442)
+.|.+-... +. ++ +.+.+. .+..|.. .+.+.+. + ..| .+. ...+.++.+.+
T Consensus 98 d~V~lg~~~----l~-----~p----~~~~~~---~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~-~~~e~~~~~~~ 160 (244)
T 2y88_A 98 ARVNVGTAA----LE-----NP----QWCARV---IGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDS 160 (244)
T ss_dssp SEEEECHHH----HH-----CH----HHHHHH---HHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEE-EHHHHHHHHHH
T ss_pred CEEEECchH----hh-----Ch----HHHHHH---HHHcCCCEEEEEeccccCCCCEEEECCccCCCC-CHHHHHHHHHh
Confidence 888753211 00 11 122233 3333321 1122111 0 000 000 34567778888
Q ss_pred cCCcEEeccCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh---CCCEE
Q 013498 246 VGATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA---GARQV 310 (442)
Q Consensus 246 ~Gad~I~laDT~--G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~-ANalaAl~a---Ga~~v 310 (442)
+|++.|.+-+.. |...+. -.++++.+++... ++|..= -|... .+...++++ ||+.|
T Consensus 161 ~G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~~----ipvia~----GGI~~~~d~~~~~~~~~~Gad~v 222 (244)
T 2y88_A 161 EGCSRFVVTDITKDGTLGGP-NLDLLAGVADRTD----APVIAS----GGVSSLDDLRAIATLTHRGVEGA 222 (244)
T ss_dssp TTCCCEEEEETTTTTTTSCC-CHHHHHHHHTTCS----SCEEEE----SCCCSHHHHHHHHTTGGGTEEEE
T ss_pred CCCCEEEEEecCCccccCCC-CHHHHHHHHHhCC----CCEEEE----CCCCCHHHHHHHHhhccCCCCEE
Confidence 999988775522 222221 2445666666542 444432 34443 667777777 87665
No 213
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.65 E-value=5.3 Score=38.93 Aligned_cols=71 Identities=15% Similarity=0.285 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHc-C--CcE--EeccCcccccCHHHHHHHHHHHHHhCCC
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV-G--ATT--LNIPDTVGITMPTEFGKLIADIKANTPG 278 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~-G--ad~--I~laDT~G~~~P~~v~~li~~l~~~~p~ 278 (442)
+.+.+.++.|.+.|.+.+.+.+.. ...+.+.+.+..+.+.++ + ... -+++..+|.-.+. +++.+|.+.+|+
T Consensus 89 ~~ai~la~~A~~~Gadavlv~~P~-~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~---~~~~~La~~~pn 164 (313)
T 3dz1_A 89 AAMRRLARLSMDAGAAGVMIAPPP-SLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTP---KVIRQIVMDSAS 164 (313)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCT-TCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCH---HHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC-CCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCH---HHHHHHHHhCCC
Confidence 455667888899999866666655 556788888888887765 4 332 2345556764443 344555555664
No 214
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=89.57 E-value=3.5 Score=39.42 Aligned_cols=199 Identities=10% Similarity=0.123 Sum_probs=116.4
Q ss_pred CCCCHHHHHHHHHHHhHc--CCCEEEEccCCCChhHHHHHH-HHHHHhcc-cccccCCccceEeeec--ccc----hhhH
Q 013498 96 ATLTSKEKLDIARQLAKL--GVDIIEAGFPAASKEDFEAVR-TIAKEVGN-AVDAESGYVPVICGLS--RCN----ERDI 165 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~--GV~~IEvG~p~~~~~d~e~v~-~l~~~~~~-~~~~~~~l~~~i~~~~--r~~----~~dI 165 (442)
-.-+.++..++.+...+- |+..+-+ +|...+ ..+ .+... +. .+ .+..+++|- ... ..++
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV-~p~~v~----~a~~~L~~~-g~~~v-----~v~tVigFP~G~~~~~~Kv~E~ 91 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICI-YPRFIP----IARKTLKEQ-GTPEI-----RIATVTNFPHGNDDIDIALAET 91 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEEC-CGGGHH----HHHHHHHHT-TCTTS-----EEEEEESTTTCCSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEE-CHHHHH----HHHHHhhhc-CCCCc-----eEEEEeCCCCCCCcHHHHHHHH
Confidence 346889999999998888 8988876 554433 222 22210 00 00 111223331 111 1234
Q ss_pred HHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHH
Q 013498 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIK 245 (442)
Q Consensus 166 ~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~ 245 (442)
+.|++. |.+.|.+.+....+ ..-..+++.+.+.+..+.+.+.|.. +-+-+|...-+|.+.+...++.+.+
T Consensus 92 ~~Av~~----GAdEIDmVinig~l-----~~g~~~~v~~ei~~v~~a~~~~g~~-lKvIlEt~~L~d~e~i~~a~~ia~e 161 (260)
T 1p1x_A 92 RAAIAY----GADEVDVVFPYRAL-----MAGNEQVGFDLVKACKEACAAANVL-LKVIIETGELKDEALIRKASEISIK 161 (260)
T ss_dssp HHHHHH----TCSEEEEECCHHHH-----HTTCCHHHHHHHHHHHHHHHHTTCE-EEEECCHHHHCSHHHHHHHHHHHHH
T ss_pred HHHHHc----CCCEEEEeccHHhh-----hCCCHHHHHHHHHHHHHHhcccCCe-EEEEEecccCCcHHHHHHHHHHHHH
Confidence 445543 89999988866532 2335678888888888888876653 5555554444666668899999999
Q ss_pred cCCcEEeccC--cccccCHHHHHHHHHHHHHhC-CCCcceeEEEeecCCcchHHHHHHHHHHh-----CCCEEEeccccc
Q 013498 246 VGATTLNIPD--TVGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACA-----GARQVEVTINGI 317 (442)
Q Consensus 246 ~Gad~I~laD--T~G~~~P~~v~~li~~l~~~~-p~~~~v~i~~H~HNDlGLA~ANalaAl~a-----Ga~~vd~Tv~Gl 317 (442)
+|||.|--.- +.|-++|+.++-+-+.+++.. +. .+++-.--..-. ...+++-+++ |.+|++....=|
T Consensus 162 aGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~----~v~VKaaGGIrt-~~~al~~i~aga~~lG~~w~~~~~~Ri 236 (260)
T 1p1x_A 162 AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEK----TVGFKPAGGVRT-AEDAQKYLAIADELFGADWADARHYRF 236 (260)
T ss_dssp TTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTT----TCEEECBSSCCS-HHHHHHHHHHHHHHHCTTSCSTTTBCE
T ss_pred hCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCC----CceEEEeCCCCC-HHHHHHHHHhhhhhccccccccCceEe
Confidence 9999887663 235669998887766666542 21 133332211111 3444444444 555666555555
Q ss_pred ccc
Q 013498 318 GER 320 (442)
Q Consensus 318 Ger 320 (442)
|-.
T Consensus 237 GtS 239 (260)
T 1p1x_A 237 GAS 239 (260)
T ss_dssp EES
T ss_pred ecc
Confidence 543
No 215
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=89.56 E-value=3 Score=41.67 Aligned_cols=80 Identities=8% Similarity=0.025 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCcEEec-------------------cCcccccCH---HHHHHHHHHHHHhCCCCcceeEEE-----
Q 013498 234 KFLYEILGEVIKVGATTLNI-------------------PDTVGITMP---TEFGKLIADIKANTPGIENVVIST----- 286 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~l-------------------aDT~G~~~P---~~v~~li~~l~~~~p~~~~v~i~~----- 286 (442)
+.+.+.++.+.++|.|.|-| .|-.|.... ..+.++++.+|+.++. + +|++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~--~-~v~vrls~~ 237 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSA--D-RIGIRVSPI 237 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCG--G-GEEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCC--C-cEEEEEccc
Confidence 45667777888999998887 144454433 3367779999999864 2 4555
Q ss_pred eecCCc---chHH----HHHHHHHHhCCCEEEecccc
Q 013498 287 HCQNDL---GLST----ANTIAGACAGARQVEVTING 316 (442)
Q Consensus 287 H~HNDl---GLA~----ANalaAl~aGa~~vd~Tv~G 316 (442)
..+++. +... .-+.+.-++|+++|+.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 274 (364)
T 1vyr_A 238 GTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETD 274 (364)
T ss_dssp SCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred cccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCc
Confidence 223321 2232 23445557899999998654
No 216
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=89.51 E-value=14 Score=35.20 Aligned_cols=176 Identities=15% Similarity=0.155 Sum_probs=105.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEcc--CCCCh--------hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGF--PAASK--------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK 166 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~--p~~~~--------~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~ 166 (442)
.=+.+..+++++.|.++|.+.+=.+. |..++ +.+..++.+++.. ++ |.++ .-.....++
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--------Gl-~~~t--e~~d~~~~~ 101 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--------GL-VTVT--EVMDTRHVE 101 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--------TC-EEEE--ECCCGGGHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--------CC-cEEE--eeCCHHhHH
Confidence 34799999999999999999988875 33332 2344455554433 22 2222 123455566
Q ss_pred HHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHc
Q 013498 167 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 167 ~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~ 246 (442)
...+. ++.+.|- ..+. +. . .+++++-+.|.. |.+.- +.-.+++.+...++.+...
T Consensus 102 ~l~~~-----vd~~kIg--a~~~--------~n---~----~ll~~~a~~~kP-V~lk~--G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 102 LVAKY-----SDILQIG--ARNS--------QN---F----ELLKEVGKVENP-VLLKR--GMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp HHHHH-----CSEEEEC--GGGT--------TC---H----HHHHHHTTSSSC-EEEEC--CTTCCHHHHHHHHHHHHTT
T ss_pred HHHhh-----CCEEEEC--cccc--------cC---H----HHHHHHHhcCCc-EEEec--CCCCCHHHHHHHHHHHHHC
Confidence 55443 4666652 2221 11 1 234444557876 77743 2333788888999999999
Q ss_pred CCcEEeccC----cc-cccCHHHHH-HHHHHHHHhCCCCcceeE-EEeecCCcch---HHHHHHHHHHhCCC--EEEecc
Q 013498 247 GATTLNIPD----TV-GITMPTEFG-KLIADIKANTPGIENVVI-STHCQNDLGL---STANTIAGACAGAR--QVEVTI 314 (442)
Q Consensus 247 Gad~I~laD----T~-G~~~P~~v~-~li~~l~~~~p~~~~v~i-~~H~HNDlGL---A~ANalaAl~aGa~--~vd~Tv 314 (442)
|...+.|+- ++ ++ .++.+. +-+..+++.+. ++| +.=.|- .|. .-.-+.+|+..||+ .|+.=+
T Consensus 157 Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~~lk~~~~----~pVi~d~sH~-~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 157 GNENVILCERGIRTFETA-TRFTLDISAVPVVKELSH----LPIIVDPSHP-AGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp TCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHHHHBS----SCEEECSSTT-TCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCeEEEEECCCCCCCCc-ChhhcCHHHHHHHHhhhC----CCEEEEcCCC-CCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 987777776 43 44 444444 56677887652 445 444453 233 33446779999999 887754
No 217
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=89.51 E-value=14 Score=34.62 Aligned_cols=210 Identities=15% Similarity=0.143 Sum_probs=109.9
Q ss_pred CCCCCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCC---------ChhHHHHHHHHHHHhcccc
Q 013498 74 IPDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA---------SKEDFEAVRTIAKEVGNAV 144 (442)
Q Consensus 74 ~~~~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~---------~~~d~e~v~~l~~~~~~~~ 144 (442)
.+.+.++-|.--|+|+. ++.++.+ +.+.++|++.||+..+.. ++++.+.++.+.+..+-.+
T Consensus 13 ~~~~~~~gi~~~~~~~~-------~~~~~~l---~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 82 (295)
T 3cqj_A 13 LSKQIPLGIYEKALPAG-------ECWLERL---QLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRV 82 (295)
T ss_dssp ---CCCEEEEGGGSCCC-------SCHHHHH---HHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEE
T ss_pred ccccccceeeeecCCCC-------CCHHHHH---HHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeE
Confidence 44556677888888752 4666654 456678999999975432 2344555655555432211
Q ss_pred cccCCccceEee-------ecccc-------hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCC----CHHHHHHHH
Q 013498 145 DAESGYVPVICG-------LSRCN-------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRK----TKQQVVEIA 206 (442)
Q Consensus 145 ~~~~~l~~~i~~-------~~r~~-------~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~----s~~e~l~~~ 206 (442)
..+.. ++..+ .+.++++++.....|.+.|.+. +.... .+. ..+...+.+
T Consensus 83 -------~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~-----~~~~~~~~~~~~~~~l 149 (295)
T 3cqj_A 83 -------PSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLA-GYDVY-----YQEANNETRRRFRDGL 149 (295)
T ss_dssp -------EEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEC-CCSCS-----SSCCCHHHHHHHHHHH
T ss_pred -------EEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEC-CCCCC-----cCcCHHHHHHHHHHHH
Confidence 11111 11111 1234556666666688887654 21100 011 234556667
Q ss_pred HHHHHHHHHcCCCeEEEccCCC-CCCCHHHHHHHHHHHHHcCCcEEecc-Ccccc----cCHHHHHHHHHHHHHhCCCCc
Q 013498 207 RSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKVGATTLNIP-DTVGI----TMPTEFGKLIADIKANTPGIE 280 (442)
Q Consensus 207 ~~~v~~ar~~G~~~V~f~~eda-sr~d~~~l~~~~~~~~~~Gad~I~la-DT~G~----~~P~~v~~li~~l~~~~p~~~ 280 (442)
.+++++|++.|+. +.+-.... .-.+++.+.++++.+ +.+.+.++ ||.=. ..| .+.++.+..
T Consensus 150 ~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~---~~~l~~~~~------ 216 (295)
T 3cqj_A 150 KESVEMASRAQVT-LAMEIMDYPLMNSISKALGYAHYL---NNPWFQLYPDIGNLSAWDNDV---QMELQAGIG------ 216 (295)
T ss_dssp HHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHHHHHH---CCTTEEEECBHHHHHSSSCCH---HHHHHHTGG------
T ss_pred HHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHHHHhc---CCCCeEEEeccchHhhcCCCH---HHHHHHhcc------
Confidence 7788888888873 55533221 123566666666555 43334333 65211 123 223332222
Q ss_pred ceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 281 NVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 281 ~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
-...+|.+|..+ |.+ . -..+|+ |..+.++++..|+..|.
T Consensus 217 -~i~~vHl~D~~~------------g~~--~--~~p~G~--G~id~~~~~~~L~~~gy 255 (295)
T 3cqj_A 217 -HIVAVHVKDTKP------------GVF--K--NVPFGE--GVVDFERCFETLKQSGY 255 (295)
T ss_dssp -GBCCEEECEEET------------TEE--E--EECTTS--SSCCHHHHHHHHHHTTC
T ss_pred -ceEEEEeecCCC------------Ccc--C--CcCCCC--CccCHHHHHHHHHHCCC
Confidence 235688887631 211 1 123444 88999999999998763
No 218
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=89.43 E-value=17 Score=35.63 Aligned_cols=116 Identities=17% Similarity=0.151 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEccCCC---------CCCCHHHHHHHHHHHHHcCCcEEecc-Ccccc-c-CHHHHH
Q 013498 199 KQQVVEIARSMVKFARSLGCDDVEFSPEDA---------GRSDRKFLYEILGEVIKVGATTLNIP-DTVGI-T-MPTEFG 266 (442)
Q Consensus 199 ~~e~l~~~~~~v~~ar~~G~~~V~f~~eda---------sr~d~~~l~~~~~~~~~~Gad~I~la-DT~G~-~-~P~~v~ 266 (442)
.+..++.+.+++++|++.|+. +.+-..+. .-.+++.+.++++. .+.+.+.++ ||.=. . .-.+..
T Consensus 193 ~~~~~~~l~~l~~~A~~~Gv~-l~lE~~~~~~~~~g~~~~~~t~~~~~~l~~~---v~~~~vgl~~D~~h~~~~~g~d~~ 268 (367)
T 1tz9_A 193 VENLRYFLERVIPVCEEENIK-MGIHPDDPPWEIFGLPRITKNLADLKRILSL---VDSPANGITFCTGSLGADPTNDLP 268 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHTCE-EEECCCSSSSCBTTBCCCTTSHHHHHHHHHH---TCSTTEECCEETTHHHHSTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCE-EEEEECCCcccccCCCcccCCHHHHHHHHHh---cCCCCEEEEEecCchhhhcCCCHH
Confidence 345566778888899999984 66644321 11355656555554 344433333 66432 1 222344
Q ss_pred HHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 267 KLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 267 ~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
+.++.+...+ ..+|.+|...- .+-...+..-.+ +.|..+..+++..|+..|.
T Consensus 269 ~~i~~~~~rI-------~~vHlkD~~~~----------~~~~~~~~~~~~---G~G~id~~~il~~L~~~gy 320 (367)
T 1tz9_A 269 TMIREIGHRI-------NFVHFRNVKYL----------GEHRFEETAHPS---VAGSLDMAELMQALVDVGY 320 (367)
T ss_dssp HHHHHHGGGC-------CCEEECCEEEC----------SSSEEEECCSSG---GGSSSCHHHHHHHHHHHTC
T ss_pred HHHHHHhhhE-------EEEEEecCCCC----------CCCccccccCCC---CCCCcCHHHHHHHHHHcCC
Confidence 5555554433 46888886421 011122221121 4588999999999987753
No 219
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=89.42 E-value=8.5 Score=37.16 Aligned_cols=220 Identities=14% Similarity=0.106 Sum_probs=114.8
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHc--CCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKL--GVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~--GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~ 157 (442)
+..+|-|+= +-.-+.++..++.+...+- |+..+-+ +|...+.- .+.+... +..+. ..+..+++|
T Consensus 33 ~~~IDhTlL------~p~~T~~dI~~lc~eA~~~~~~~aaVCV-~p~~V~~a---~~~L~~~-gs~~~---v~v~tVigF 98 (281)
T 2a4a_A 33 ICLTDHTFL------DENGTEDDIRELCNESVKTCPFAAAVCV-YPKFVKFI---NEKIKQE-INPFK---PKIACVINF 98 (281)
T ss_dssp HTTEEEECC------CTTCCHHHHHHHHHHHHSSSSCCSEEEE-CGGGHHHH---HHHHHHH-SSSCC---SEEEEEEST
T ss_pred HHHcchhcC------CCCCCHHHHHHHHHHHHhccCCccEEEE-CHHHHHHH---HHHhhcc-CCCCC---ceEEEEeCC
Confidence 446777763 3346899999999999999 9999988 55443311 1122211 11000 011222333
Q ss_pred c--ccc----hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHH---HHHHHHHHHHHHHHHcCCCeEEEccCCC
Q 013498 158 S--RCN----ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQ---QVVEIARSMVKFARSLGCDDVEFSPEDA 228 (442)
Q Consensus 158 ~--r~~----~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~---e~l~~~~~~v~~ar~~G~~~V~f~~eda 228 (442)
- ... ..+++.|++. |.+.|.+.+....+.. -..+ ++.+.+.+..+.+. +. .+-+-+|..
T Consensus 99 P~G~~~~~~Kv~E~~~Av~~----GAdEIDmVinig~lks-----g~~~~~~~v~~eI~~v~~a~~--~~-~lKVIlEt~ 166 (281)
T 2a4a_A 99 PYGTDSMEKVLNDTEKALDD----GADEIDLVINYKKIIE-----NTDEGLKEATKLTQSVKKLLT--NK-ILKVIIEVG 166 (281)
T ss_dssp TTCCSCHHHHHHHHHHHHHH----TCSEEEEECCHHHHHH-----SHHHHHHHHHHHHHHHHTTCT--TS-EEEEECCHH
T ss_pred CCCCCCHHHHHHHHHHHHHc----CCCEEEEecchHhhhC-----CChhHHHHHHHHHHHHHHHhc--CC-ceEEEEecc
Confidence 1 111 1234445544 9999999886653211 1223 45555555544443 22 244444544
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccC--cccccCHHHHHHHHHHHHHh-------CCCCcceeEEEeecCCcchHHHHH
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKAN-------TPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laD--T~G~~~P~~v~~li~~l~~~-------~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
.-+|.+.+...++.+.++|||.|--.- +.|-++|+.+.-+.+.+++. -+.. .+...==.+ ++--|++-.
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~v-gVKaaGGIr-t~e~al~~i 244 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKI-GLKVSGGIS-DLNTASHYI 244 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCC-EEEEESSCC-SHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCc-eEEEeCCCC-CHHHHHHHH
Confidence 446666688999999999999988663 33678999988777776532 1111 122211112 322233222
Q ss_pred HHHH-HhCCCEEEecccccccccCcccHH
Q 013498 300 IAGA-CAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 300 laAl-~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
.++. ..|.+|++....=||..+|-..++
T Consensus 245 ~aga~~lG~~w~~~~~~RiGtSs~~~~l~ 273 (281)
T 2a4a_A 245 LLARRFLSSLACHPDNFRIGSSSLVIKLR 273 (281)
T ss_dssp HHHHHHTC------CCEEEEESSHHHHHH
T ss_pred HHhhhhccccccccCceEEecCccHHHHH
Confidence 2222 246678887777777765555443
No 220
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=89.31 E-value=3.9 Score=39.52 Aligned_cols=139 Identities=17% Similarity=0.211 Sum_probs=82.1
Q ss_pred HHHHHHHhHcCCCEEEEcc---------CC----CChhHHHHHHHHHHHhcccccccCCccceEee--eccc--chhh-H
Q 013498 104 LDIARQLAKLGVDIIEAGF---------PA----ASKEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRC--NERD-I 165 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG~---------p~----~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~--~~r~--~~~d-I 165 (442)
-.-++.++++|+|.|=+|. |. ..++.....+.+++-..+. +.+.. |.-. +.++ +
T Consensus 44 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 44 YSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHA--------LVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp HHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTS--------EEEEECCTTSSTTCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCC--------eEEEECCCCcccCCHHHHH
Confidence 3458889999999998873 22 2233456677776653221 12222 2221 2333 4
Q ss_pred HHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EccCC---------CCCCC
Q 013498 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRSD 232 (442)
Q Consensus 166 ~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~----f~~ed---------asr~d 232 (442)
+.+.+.++++|+..|++-... .+.+.|+.+.+.|++ |+ +.+.+ .+|++
T Consensus 116 ~na~rl~~eaGa~aVklEdg~------------------e~~~~I~al~~agIp-V~gHiGLtPqsv~~~ggf~v~grt~ 176 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGGE------------------RVAEQIACLTAAGIP-VMAHIGFTPQSVNTLGGFRVQGRGD 176 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBSG------------------GGHHHHHHHHHHTCC-EEEEEECCC--------------CH
T ss_pred HHHHHHHHHhCCeEEEECCcH------------------HHHHHHHHHHHCCCC-EEeeecCCcceecccCCeEEEeCcH
Confidence 556777777899999987641 234556666778876 43 22211 12343
Q ss_pred -HHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCC
Q 013498 233 -RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (442)
Q Consensus 233 -~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p 277 (442)
.+.+.+-++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 214 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEM-----VPA---ELATQITGKLT 214 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 35677777888899999998842 343 35566666664
No 221
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=89.30 E-value=2 Score=43.22 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=78.3
Q ss_pred HHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCCC-----CCCCH
Q 013498 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRSDR 233 (442)
Q Consensus 172 l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~eda-----sr~d~ 233 (442)
.+++|.+.|.+..+. |+. +....+|-+.+.-.+.+.+.++.+|+. |. . .|.+++.+. ...+.
T Consensus 175 a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~ 254 (377)
T 2r14_A 175 AKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPE 254 (377)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHH
T ss_pred HHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCH
Confidence 456799999987653 221 122345556666667777777777664 32 1 355665321 23456
Q ss_pred HHHHHHHHHHHHcCCcEEeccCcc-cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 013498 234 KFLYEILGEVIKVGATTLNIPDTV-GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT~-G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~~v 310 (442)
+...++++.+.++|+|.|.+..-. -...|..-.++++.+++.++ ++|..=. +. -...+..+++.| ||.|
T Consensus 255 ~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~----iPvi~~G--gi--~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK----GGLIYCG--NY--DAGRAQARLDDNTADAV 325 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC----SEEEEES--SC--CHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC----CCEEEEC--CC--CHHHHHHHHHCCCceEE
Confidence 788899999999999999885411 00001001356777888774 4444322 22 266777888887 7776
No 222
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.29 E-value=15 Score=34.70 Aligned_cols=177 Identities=13% Similarity=0.048 Sum_probs=91.8
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCChH-----HHH------HHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCC
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATSGI-----HME------HKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPED 227 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~-----h~~------~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~ed 227 (442)
+.+.-...++.+.++|+|.|.+=+|.||. .++ .+-|++.+..+ +.++..|+. ... +.+ +
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~----~~v~~ir~~~~~~P-i~~--m- 100 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVL----ELSETLRKEFPDIP-FLL--M- 100 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHH----HHHHHHHHHCTTSC-EEE--E-
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHH----HHHHHHHhhcCCCC-EEE--E-
Confidence 33333334556677899999988888752 222 23456655544 455555655 444 333 1
Q ss_pred CCCCCHHHH---HHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 228 AGRSDRKFL---YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 228 asr~d~~~l---~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
+..++-+- .++++.+.++|+|.+.++| +.+++..++++.++++ ++.-+.+. .+++. ..-.-.++...
T Consensus 101 -~y~n~v~~~g~~~f~~~~~~aG~dgvii~d----l~~ee~~~~~~~~~~~--gl~~i~l~--~p~t~-~~rl~~ia~~a 170 (262)
T 2ekc_A 101 -TYYNPIFRIGLEKFCRLSREKGIDGFIVPD----LPPEEAEELKAVMKKY--VLSFVPLG--APTST-RKRIKLICEAA 170 (262)
T ss_dssp -CCHHHHHHHCHHHHHHHHHHTTCCEEECTT----CCHHHHHHHHHHHHHT--TCEECCEE--CTTCC-HHHHHHHHHHC
T ss_pred -ecCcHHHHhhHHHHHHHHHHcCCCEEEECC----CCHHHHHHHHHHHHHc--CCcEEEEe--CCCCC-HHHHHHHHHhC
Confidence 23333222 5778889999999999988 4468888999888875 11112222 33221 12223344444
Q ss_pred hCCCEEEecccccccccCc--ccHHHHHHHHHhccccccCCccCCCC-hhHHHHH
Q 013498 305 AGARQVEVTINGIGERAGN--ASLEEVVMAFKCRGEHILGGLYTGIN-TRHIVMA 356 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGN--a~lEevv~~L~~~g~~~~~G~~tgid-l~~L~~l 356 (442)
.|.-+..+.....|.+.+. .++.+++..++....- ...+.-||. .+.+.++
T Consensus 171 ~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~-pv~vG~GI~t~e~~~~~ 224 (262)
T 2ekc_A 171 DEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDK-PVVVGFGVSKKEHAREI 224 (262)
T ss_dssp SSCEEEESSCC---------CHHHHHHHHHHHHHCCS-CEEEESSCCSHHHHHHH
T ss_pred CCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCC-CEEEeCCCCCHHHHHHH
Confidence 5654444333355666654 2355666666654211 012335665 5555443
No 223
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=89.17 E-value=1.2 Score=43.89 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=52.2
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEecc-Cc----ccccCHHHHHHH---HHHHHHhCCCCcceeEEEeecCCcchHHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIP-DT----VGITMPTEFGKL---IADIKANTPGIENVVISTHCQNDLGLSTA 297 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~la-DT----~G~~~P~~v~~l---i~~l~~~~p~~~~v~i~~H~HNDlGLA~A 297 (442)
|.++. +.+.+.+.++.+.+.|||.|-+. .+ ..+...+++.++ |+.+++.+|+ ++|++=+=+ ..
T Consensus 57 dgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~---vpISIDT~~-----~~ 128 (318)
T 2vp8_A 57 DKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPD---QLISVDTWR-----AQ 128 (318)
T ss_dssp -------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTT---CEEEEECSC-----HH
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCC---CeEEEeCCC-----HH
Confidence 55544 67888888899999999988776 12 224445666666 6777777753 788885544 34
Q ss_pred HHHHHHHhCCCEEEeccc
Q 013498 298 NTIAGACAGARQVEVTIN 315 (442)
Q Consensus 298 NalaAl~aGa~~vd~Tv~ 315 (442)
-+.+|+++|++.|+-.-+
T Consensus 129 VaeaAl~aGa~iINDVsg 146 (318)
T 2vp8_A 129 VAKAACAAGADLINDTWG 146 (318)
T ss_dssp HHHHHHHHTCCEEEETTS
T ss_pred HHHHHHHhCCCEEEECCC
Confidence 557899999999975544
No 224
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=89.15 E-value=17 Score=35.29 Aligned_cols=195 Identities=16% Similarity=0.167 Sum_probs=113.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWE 170 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e 170 (442)
.+..+.-.++++.|.+.||+-|=+ | ++..+.+|. +.++...+... +.+|.|++.+-...+-|+.+-.
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~-------grvpViaGvg~~t~~ai~la~~ 101 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH-------GRALVVAGIGYATSTAIELGNA 101 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEEECSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-------CCCcEEEEeCcCHHHHHHHHHH
Confidence 478888999999999999998876 3 355566664 45566556542 2357788877433344554433
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcE
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATT 250 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~ 250 (442)
.+.+|++.+-+..|-. .+.|.+++++-....++.+ ++.-+-++. ....+++.+.+++ +. ...
T Consensus 102 -A~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~---~lPiilYn~--g~~l~~~~~~~La----~~-pnI 163 (316)
T 3e96_A 102 -AKAAGADAVMIHMPIH-------PYVTAGGVYAYFRDIIEAL---DFPSLVYFK--DPEISDRVLVDLA----PL-QNL 163 (316)
T ss_dssp -HHHHTCSEEEECCCCC-------SCCCHHHHHHHHHHHHHHH---TSCEEEEEC--CTTSCTHHHHHHT----TC-TTE
T ss_pred -HHhcCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHHhC---CCCEEEEeC--CCCCCHHHHHHHH----cC-CCE
Confidence 3456999887665532 2347777777666665544 455344553 3456666655554 33 579
Q ss_pred EeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHH
Q 013498 251 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVV 330 (442)
Q Consensus 251 I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv 330 (442)
+.+.||.|- ..++.+++ +..++. +...-+-..++.- ....+..|++. .+.| .+|...+.++
T Consensus 164 vgiKdssgd--~~~~~~~~----~~~~~~-~f~~v~~G~d~~~-----~~~~l~~G~~G---~is~----~an~~P~~~~ 224 (316)
T 3e96_A 164 VGVKYAIND--LPRFAKVV----RSIPEE-HQIAWICGTAEKW-----APFFWHAGAKG---FTSG----LVNLLPQKAV 224 (316)
T ss_dssp EEEEECCCC--HHHHHHHH----TTSCGG-GCCEEEETTCTTT-----HHHHHHHTCCE---EEES----GGGTCHHHHH
T ss_pred EEEEeCCCC--HHHHHHHH----HhcCCC-CceEEEeCChHHH-----HHHHHHCCCCE---EEec----hhhhhHHHHH
Confidence 999999874 34554444 333310 1110233333321 12345778864 2333 3577777776
Q ss_pred HHHHh
Q 013498 331 MAFKC 335 (442)
Q Consensus 331 ~~L~~ 335 (442)
...+.
T Consensus 225 ~l~~a 229 (316)
T 3e96_A 225 EMLEA 229 (316)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 225
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.14 E-value=11 Score=36.26 Aligned_cols=200 Identities=15% Similarity=0.051 Sum_probs=118.8
Q ss_pred HHHHhHcCCCEEEEc---------cCCCC----hhHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHHH
Q 013498 107 ARQLAKLGVDIIEAG---------FPAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTAW 169 (442)
Q Consensus 107 a~~L~~~GV~~IEvG---------~p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a~ 169 (442)
++.++++|++.|=+| +|... .+....++.+++... .|.++ ||+. ..+.+.+..
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~---------~pviaD~d~Gyg~-~~~~~~~~v 98 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVA---------IPVNADIEAGYGH-APEDVRRTV 98 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCS---------SCEEEECTTCSSS-SHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcC---------CCEEeecCCCCCC-CHHHHHHHH
Confidence 567788899999886 23221 122456666665432 14343 2221 344444444
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCC--------CHHHHHHHHH
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRS--------DRKFLYEILG 241 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~--------d~~~l~~~~~ 241 (442)
..+..+|+..|++-..+. | ..+-=.+.++..++++.+++.+++.|.+.+...=.|+.-. ..+.+.+-++
T Consensus 99 ~~l~~aGaagv~iED~~~--~-~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ 175 (275)
T 2ze3_A 99 EHFAALGVAGVNLEDATG--L-TPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQ 175 (275)
T ss_dssp HHHHHTTCSEEEEECBCS--S-SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCcC--C-CCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHH
Confidence 445568999999987764 2 1111137788889888888888877876322221233111 2467777778
Q ss_pred HHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccccccc
Q 013498 242 EVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERA 321 (442)
Q Consensus 242 ~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGera 321 (442)
...++|||.|.+.= .-.++++.++.+.+ + +|+-+-+.. ++- ..-+--+.|++.|-.... +-|+
T Consensus 176 ay~eAGAd~i~~e~---~~~~~~~~~i~~~~----~----~P~n~~~~~--~~~--~~~eL~~lGv~~v~~~~~--~~ra 238 (275)
T 2ze3_A 176 AYADAGADGIFVPL---ALQSQDIRALADAL----R----VPLNVMAFP--GSP--VPRALLDAGAARVSFGQS--LMLA 238 (275)
T ss_dssp HHHHTTCSEEECTT---CCCHHHHHHHHHHC----S----SCEEEECCT--TSC--CHHHHHHTTCSEEECTTH--HHHH
T ss_pred HHHHCCCCEEEECC---CCCHHHHHHHHHhc----C----CCEEEecCC--CCC--CHHHHHHcCCcEEEEChH--HHHH
Confidence 88899999999853 34456666655544 2 334333432 221 224555779999864433 2467
Q ss_pred CcccHHHHHHHHHhc
Q 013498 322 GNASLEEVVMAFKCR 336 (442)
Q Consensus 322 GNa~lEevv~~L~~~ 336 (442)
-+.++++++..+...
T Consensus 239 a~~a~~~~~~~i~~~ 253 (275)
T 2ze3_A 239 TLGLVQRMAAELHAA 253 (275)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 777888888777764
No 226
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=89.12 E-value=3.1 Score=41.01 Aligned_cols=131 Identities=18% Similarity=0.098 Sum_probs=86.0
Q ss_pred HhCCCCEEEEee-cCChHHHHHHhC------CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHH
Q 013498 173 KYAKRPRIHTFI-ATSGIHMEHKLR------KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIK 245 (442)
Q Consensus 173 ~~~g~~~v~i~~-~~Sd~h~~~~l~------~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~ 245 (442)
..+|++.|.+.. +++ + ..+| .|.++.+..++...+-++ .. -|...++..+ -+++.+.+.++.+.+
T Consensus 56 e~aGfdai~vs~~~~a---~-~~lG~pD~~~vt~~em~~~~~~I~r~~~--~~-PviaD~d~Gy-g~~~~v~~tv~~l~~ 127 (318)
T 1zlp_A 56 EKTGFHAAFVSGYSVS---A-AMLGLPDFGLLTTTEVVEATRRITAAAP--NL-CVVVDGDTGG-GGPLNVQRFIRELIS 127 (318)
T ss_dssp HHTTCSEEEECHHHHH---H-HHHCCCSSSCSCHHHHHHHHHHHHHHSS--SS-EEEEECTTCS-SSHHHHHHHHHHHHH
T ss_pred HHcCCCEEEECcHHHh---h-HhcCCCCCCCCCHHHHHHHHHHHHhhcc--CC-CEEEeCCCCC-CCHHHHHHHHHHHHH
Confidence 346888876543 122 1 1233 578888887776655443 34 3777876663 489999999999999
Q ss_pred cCCcEEeccCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc----chHHHHHHHHHHhCCCEE
Q 013498 246 VGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDL----GLSTANTIAGACAGARQV 310 (442)
Q Consensus 246 ~Gad~I~laDT~G-----------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDl----GLA~ANalaAl~aGa~~v 310 (442)
+|+..|.|-|.++ ....+++.+.|+.+++...+. +..|-.-+-... --++.-+.+..+|||+.|
T Consensus 128 aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~-~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i 206 (318)
T 1zlp_A 128 AGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDS-DFFLVARTDARAPHGLEEGIRRANLYKEAGADAT 206 (318)
T ss_dssp TTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTS-CCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred cCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccC-CcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 9999999999974 344456677888887654211 234443332211 247778889999999987
Q ss_pred Ee
Q 013498 311 EV 312 (442)
Q Consensus 311 d~ 312 (442)
=.
T Consensus 207 ~~ 208 (318)
T 1zlp_A 207 FV 208 (318)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 227
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=89.11 E-value=3.2 Score=38.69 Aligned_cols=173 Identities=13% Similarity=0.163 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccch-hhHHHHHHHHHhCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYAKR 177 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~e~l~~~g~ 177 (442)
+.++-+++++.+.. .++.+++|.+-....-.+.++.|.+..+. +.+..+-+... +-++.+.+....+|.
T Consensus 23 ~~~~a~~~v~~~~~-~v~~~Kvg~~lf~~~G~~~v~~l~~~~g~---------~v~lD~Kl~DipnTv~~~~~~~~~~ga 92 (228)
T 3m47_A 23 NRDDALRVTGEVRE-YIDTVKIGYPLVLSEGMDIIAEFRKRFGC---------RIIADFKVADIPETNEKICRATFKAGA 92 (228)
T ss_dssp SHHHHHHHHHTTTT-TCSEEEEEHHHHHHHCTHHHHHHHHHHCC---------EEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCC-cccEEEEcHHHHHhcCHHHHHHHHhcCCC---------eEEEEEeecccHhHHHHHHHHHHhCCC
Confidence 45666666665421 28999998532111112456666552111 23444444422 234556666667899
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-ccCCCC--CCC-HHHHHHHHHHHHHcCCcEEec
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPEDAG--RSD-RKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f-~~edas--r~d-~~~l~~~~~~~~~~Gad~I~l 253 (442)
+.+.+...... +.+..+++.+++.|.. |.+ +..+.. ... .+.+.++++.+.++|.+.+..
T Consensus 93 d~vtvh~~~G~---------------~~l~~~~~~~~~~g~~-v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~ 156 (228)
T 3m47_A 93 DAIIVHGFPGA---------------DSVRACLNVAEEMGRE-VFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVG 156 (228)
T ss_dssp SEEEEESTTCH---------------HHHHHHHHHHHHHTCE-EEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEEeccCCH---------------HHHHHHHHHHHhcCCC-eEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 98776544332 3344667777777753 543 222111 111 245667888888999887553
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 254 aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
|...|+++.+ +|+..|+ +..+-.= -.|..-++. .++++|++++=
T Consensus 157 ----~at~~~e~~~----ir~~~~~--~~~iv~P---GI~~~g~~p-~~~~aGad~iV 200 (228)
T 3m47_A 157 ----PSTRPERLSR----LREIIGQ--DSFLISP---GVGAQGGDP-GETLRFADAII 200 (228)
T ss_dssp ----CSSCHHHHHH----HHHHHCS--SSEEEEC---C----------CGGGTCSEEE
T ss_pred ----CCCChHHHHH----HHHhcCC--CCEEEec---CcCcCCCCH-hHHHcCCCEEE
Confidence 4446776654 3443332 1111100 001111244 88899999763
No 228
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=89.04 E-value=8.3 Score=37.11 Aligned_cols=137 Identities=14% Similarity=0.176 Sum_probs=79.3
Q ss_pred HHHHHHhHcCCCEEEEcc---------CCCC----hhHHHHHHHHHHHhcccccccCCccceEee--eccc--chh-hHH
Q 013498 105 DIARQLAKLGVDIIEAGF---------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRC--NER-DIK 166 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~---------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~--~~r~--~~~-dI~ 166 (442)
.-++.++++|+|.|=+|. |... ++.....+.+++-... .+.++. |.-. +.+ -++
T Consensus 28 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~--------~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 28 SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKN--------AMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSS--------SEEEEECCTTSSSSCHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCC--------CeEEEECCCCCccCCHHHHHH
Confidence 347888999999998873 3222 2234455666654322 122232 2211 222 234
Q ss_pred HHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EccCC---------CCCC-C
Q 013498 167 TAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPED---------AGRS-D 232 (442)
Q Consensus 167 ~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~----f~~ed---------asr~-d 232 (442)
.+.+.++ +|+..|++-... .+.+.|+.+.+.|++ |+ +.+.+ .+|+ .
T Consensus 100 na~rl~k-aGa~aVklEdg~------------------e~~~~I~al~~agIp-V~gHiGLtPQs~~~~ggf~v~grt~~ 159 (275)
T 1o66_A 100 AAAELMA-AGAHMVKLEGGV------------------WMAETTEFLQMRGIP-VCAHIGLTPQSVFAFGGYKVQGRGGK 159 (275)
T ss_dssp HHHHHHH-TTCSEEEEECSG------------------GGHHHHHHHHHTTCC-EEEEEESCGGGTTC-----------C
T ss_pred HHHHHHH-cCCcEEEECCcH------------------HHHHHHHHHHHcCCC-eEeeeccCceeecccCCeEEEeChHH
Confidence 4445555 899999886541 234566777788986 54 22211 1232 3
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCC
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p 277 (442)
.+.+.+-++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 196 (275)
T 1o66_A 160 AQALLNDAKAHDDAGAAVVLMEC-----VLA---ELAKKVTETVS 196 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 47788888899999999998842 343 35566666664
No 229
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=89.01 E-value=8.4 Score=37.32 Aligned_cols=143 Identities=14% Similarity=0.118 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE-ecc-Ccccc-cCHHHHHHHHHHHHH--hCCCCcc
Q 013498 207 RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIP-DTVGI-TMPTEFGKLIADIKA--NTPGIEN 281 (442)
Q Consensus 207 ~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I-~la-DT~G~-~~P~~v~~li~~l~~--~~p~~~~ 281 (442)
+++.+.|++.|+..-.|++ .+.+.+..+++.+.+.+...| .+. .+... .-...+..++..+.+ .. +
T Consensus 10 ~~ll~~A~~~~yAV~AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~----~ 80 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQFNM-----NNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI----T 80 (288)
T ss_dssp HHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC----C
T ss_pred HHHHHHHHHCCcEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC----C
Confidence 5688889999986446776 457999999999999987754 343 22333 234456777777766 44 3
Q ss_pred eeEEEeecCCcchHHHHHHHHHHhCCCE--EEeccccccc----------------------------c--------cCc
Q 013498 282 VVISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIGE----------------------------R--------AGN 323 (442)
Q Consensus 282 v~i~~H~HNDlGLA~ANalaAl~aGa~~--vd~Tv~GlGe----------------------------r--------aGN 323 (442)
+||.+|. |-|-...-...|+++|.+- +|+|-..+-| - .-.
T Consensus 81 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~y 158 (288)
T 3q94_A 81 VPVAIHL--DHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIY 158 (288)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBC
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccC
Confidence 7888776 4444567789999999976 5776554332 0 124
Q ss_pred ccHHHHHHHHHhcccccc-------CCc---cCCCChhHHHHHHHHH
Q 013498 324 ASLEEVVMAFKCRGEHIL-------GGL---YTGINTRHIVMASKMV 360 (442)
Q Consensus 324 a~lEevv~~L~~~g~~~~-------~G~---~tgidl~~L~~ls~~v 360 (442)
+..|+...+.+..|.+.+ -|. ...+|++.|.++.+.+
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v 205 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT 205 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc
Confidence 778998888876553310 022 3568999998887766
No 230
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.99 E-value=13 Score=33.61 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=100.0
Q ss_pred EEEeCCCCcCCCCCCCCC-CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeec-
Q 013498 81 RVFDTTLRDGEQSPGATL-TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLS- 158 (442)
Q Consensus 81 ~I~DtTLRDG~Q~~g~~f-s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~- 158 (442)
.|+-|-...|+ +| ..+.-.++++.+.+.|.+.|++. ++ +.++.+.+.... |.+..+.
T Consensus 7 ~~~~~q~~~~~-----p~~~~~~~~~~a~~~~~~Ga~~i~~~----~~---~~i~~i~~~~~~---------pv~~~~~~ 65 (223)
T 1y0e_A 7 LIVSCQALPDE-----PLHSSFIMSKMALAAYEGGAVGIRAN----TK---EDILAIKETVDL---------PVIGIVKR 65 (223)
T ss_dssp EEEECCCCTTS-----TTCCHHHHHHHHHHHHHHTCSEEEEE----SH---HHHHHHHHHCCS---------CEEEECBC
T ss_pred eEEEecCCCCC-----CCCCCccHHHHHHHHHHCCCeeeccC----CH---HHHHHHHHhcCC---------CEEeeecc
Confidence 35555444443 34 45788899999999999999985 33 346666554311 2111100
Q ss_pred ---------ccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCC
Q 013498 159 ---------RCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPED 227 (442)
Q Consensus 159 ---------r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~ed 227 (442)
....++++.++++ |.+.|.+-.... .++. +.+.+.++.+|+. |.. +..++
T Consensus 66 ~~~~~~~~i~~~~~~i~~~~~~----Gad~v~l~~~~~---------~~p~---~~~~~~i~~~~~~~~~~~-v~~~~-- 126 (223)
T 1y0e_A 66 DYDHSDVFITATSKEVDELIES----QCEVIALDATLQ---------QRPK---ETLDELVSYIRTHAPNVE-IMADI-- 126 (223)
T ss_dssp CCTTCCCCBSCSHHHHHHHHHH----TCSEEEEECSCS---------CCSS---SCHHHHHHHHHHHCTTSE-EEEEC--
T ss_pred CCCccccccCCcHHHHHHHHhC----CCCEEEEeeecc---------cCcc---cCHHHHHHHHHHhCCCce-EEecC--
Confidence 1134566666654 888887653221 0000 0123566777777 763 55443
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccC---c---ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPD---T---VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTI 300 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laD---T---~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL-A~ANal 300 (442)
.++++ ++.+.++|+|.|.+.- | .+......-.++++.+++.+. +++.. +=|. -..|..
T Consensus 127 ---~t~~e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~----ipvia----~GGI~~~~~~~ 191 (223)
T 1y0e_A 127 ---ATVEE----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD----AKVIA----EGNVITPDMYK 191 (223)
T ss_dssp ---SSHHH----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC----SEEEE----ESSCCSHHHHH
T ss_pred ---CCHHH----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC----CCEEE----ecCCCCHHHHH
Confidence 23443 3457789999886531 1 111102223457788887662 45543 3455 567888
Q ss_pred HHHHhCCCEEEe
Q 013498 301 AGACAGARQVEV 312 (442)
Q Consensus 301 aAl~aGa~~vd~ 312 (442)
.++++||+.|-.
T Consensus 192 ~~~~~Gad~v~v 203 (223)
T 1y0e_A 192 RVMDLGVHCSVV 203 (223)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 888999988743
No 231
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.97 E-value=6.9 Score=38.67 Aligned_cols=134 Identities=12% Similarity=0.027 Sum_probs=83.2
Q ss_pred HHHHhCCCCEEEEeecCC--------hH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEccCCC--CCCCH
Q 013498 170 EAVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDR 233 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~S--------d~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~---~V~f~~eda--sr~d~ 233 (442)
+..+++|.|.|.+..+.. +. +....+|-+.+.-.+.+.+.++.+|+. |-+ .|.+++.+. ...+.
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~ 238 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSL 238 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCH
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCH
Confidence 334568999998876642 21 112345556777777778888888775 322 256666431 23567
Q ss_pred HHHHHHHHHHHHcCCcEEeccC--cccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-
Q 013498 234 KFLYEILGEVIKVGATTLNIPD--TVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG- 306 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laD--T~G~----~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG- 306 (442)
+...++++.+.++|+|.|.+.. +... ..|....++++.+++.++ ++|..=.-- .-...+..+++.|
T Consensus 239 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~Ggi---~t~e~a~~~l~~G~ 311 (349)
T 3hgj_A 239 EDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG----LRTGAVGLI---TTPEQAETLLQAGS 311 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC----CEEEECSSC---CCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC----ceEEEECCC---CCHHHHHHHHHCCC
Confidence 8888999999999999998875 1111 112233467778887763 455432210 1245677888888
Q ss_pred CCEE
Q 013498 307 ARQV 310 (442)
Q Consensus 307 a~~v 310 (442)
||.|
T Consensus 312 aD~V 315 (349)
T 3hgj_A 312 ADLV 315 (349)
T ss_dssp CSEE
T ss_pred ceEE
Confidence 7766
No 232
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=88.89 E-value=16 Score=37.52 Aligned_cols=199 Identities=17% Similarity=0.112 Sum_probs=123.8
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCCh----HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC----------
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSG----IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG---------- 229 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd----~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas---------- 229 (442)
.+.+.++.+.++|+..|+|-..+.. -|+.-+-=.+.++.++++..+...++..|.+.+.+.=.|+-
T Consensus 168 ~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d 247 (439)
T 3i4e_A 168 NAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDID 247 (439)
T ss_dssp HHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccc
Confidence 4555555566679999999887642 12211112478999999988877777778652222112321
Q ss_pred -------------------CCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 013498 230 -------------------RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 290 (442)
Q Consensus 230 -------------------r~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HN 290 (442)
+...+..++-+++..+ |||.|.+- .|.-.++++.++.+.++..+|. ..+.+-+--
T Consensus 248 ~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E--~~~~~~eei~~f~~~v~~~~P~---~~l~~~~sP 321 (439)
T 3i4e_A 248 DNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCE--TGKPDLEYAKKFAEAIHKQFPG---KLLSYNCSP 321 (439)
T ss_dssp TTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEEC--CSSCCHHHHHHHHHHHHHHSTT---CEEEEECCS
T ss_pred cccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEec--CCCCCHHHHHHHHHHhcccCCc---eEEeeCCCC
Confidence 2345666666666666 99999771 2567899999999999987874 234433222
Q ss_pred Ccc----hH---HHH-HHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHH--HHH
Q 013498 291 DLG----LS---TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMAS--KMV 360 (442)
Q Consensus 291 DlG----LA---~AN-alaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls--~~v 360 (442)
.+. |. +++ .-.--+.|+.++-.++.| =|+-|.++++++..+...| +....++- ++.
T Consensus 322 sfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~--~raa~~A~~~~a~~i~~~G------------m~ayve~Q~~e~~ 387 (439)
T 3i4e_A 322 SFNWKKNLDDATIAKFQKELGAMGYKFQFITLAG--FHALNYSMFNLAHGYARTQ------------MSAFVELQQAEFA 387 (439)
T ss_dssp SSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHH--HHHHHHHHHHHHHHHHHHT------------HHHHHHHHHHHHH
T ss_pred CCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHH--HHHHHHHHHHHHHHHHHhC------------CHHHHHHHHHhhh
Confidence 222 11 111 123335799999777765 4788889999988887643 11222211 122
Q ss_pred HHHhCCCCCCCCccccchhhhh
Q 013498 361 EEYTGLHVQPHKAIVGANAFAH 382 (442)
Q Consensus 361 ~~~~g~~i~~~~pivG~~aF~h 382 (442)
.+..|+..-.|+-.+|.++|-.
T Consensus 388 ~~~~g~~~~~hq~~~G~~y~d~ 409 (439)
T 3i4e_A 388 AADKGFTAVKHQREVGTGYFDA 409 (439)
T ss_dssp HTTTTCCTTSHHHHTTHHHHHH
T ss_pred hhhcCcceeecccccccchHHH
Confidence 3567888878888999888843
No 233
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=88.79 E-value=1.4 Score=43.10 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=55.5
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeccC-c-----ccccCHHHHHHHH---HHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-T-----VGITMPTEFGKLI---ADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~laD-T-----~G~~~P~~v~~li---~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
|.++. +++...+.++...+.|||.|-+.= + ..+...+++.+++ +.+++.+ +++|++.+.+ .
T Consensus 55 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~----~vpiSIDT~~-----~ 125 (297)
T 1tx2_A 55 DGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV----KLPISIDTYK-----A 125 (297)
T ss_dssp SSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS----CSCEEEECSC-----H
T ss_pred cCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC----CceEEEeCCC-----H
Confidence 44443 577888888888899999887762 2 2233456676666 6666655 3789999875 4
Q ss_pred HHHHHHHHhCCCEEEeccc
Q 013498 297 ANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 297 ANalaAl~aGa~~vd~Tv~ 315 (442)
.-+.+|+++|++.|+-.-.
T Consensus 126 ~V~~aAl~aGa~iINdvsg 144 (297)
T 1tx2_A 126 EVAKQAIEAGAHIINDIWG 144 (297)
T ss_dssp HHHHHHHHHTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEECCC
Confidence 5567889999999965433
No 234
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=88.74 E-value=13 Score=36.15 Aligned_cols=108 Identities=9% Similarity=0.066 Sum_probs=63.7
Q ss_pred HHHHHhCC--CCEEEEeecCChHHHHHHhCC-CHHHHHHHHHHHHHHHHHcCCCeEEEccC-CCCCCCHHHHHHHHHHHH
Q 013498 169 WEAVKYAK--RPRIHTFIATSGIHMEHKLRK-TKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g--~~~v~i~~~~Sd~h~~~~l~~-s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-dasr~d~~~l~~~~~~~~ 244 (442)
++.+..+| .+.+.+.+-..+-....+++. .....++.+.+.++.+++.|.. |.+... ..+..+ +.+.++++.+.
T Consensus 185 l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i~~l~~~g~~-v~i~~~l~~g~n~-~~~~~l~~~l~ 262 (342)
T 2yx0_A 185 LEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRDLPTR-TVVRLTLVKGENM-HSPEKYAKLIL 262 (342)
T ss_dssp HHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHHHHHTTCSSE-EEEEEEECTTTTC-CCHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHHHHHHhCCCC-EEEEEEEECCccH-HHHHHHHHHHH
Confidence 34444555 788888766543223333322 1123466777888888988874 444321 111222 22667777777
Q ss_pred HcCCcEEec--------cC----cccccCHHHHHHHHHHHHHhCCC
Q 013498 245 KVGATTLNI--------PD----TVGITMPTEFGKLIADIKANTPG 278 (442)
Q Consensus 245 ~~Gad~I~l--------aD----T~G~~~P~~v~~li~~l~~~~p~ 278 (442)
+.|++.|.+ .. ......++++.++...+++.+|+
T Consensus 263 ~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~~ 308 (342)
T 2yx0_A 263 KARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPG 308 (342)
T ss_dssp HHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTT
T ss_pred HcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhccC
Confidence 889887663 11 12345678999999999988875
No 235
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.72 E-value=3.4 Score=40.08 Aligned_cols=182 Identities=15% Similarity=0.071 Sum_probs=99.3
Q ss_pred HHHHhHcCCCEEEEcc----------CCCCh----hHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 107 ARQLAKLGVDIIEAGF----------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~----------p~~~~----~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
++.++++|++.|=+|. |...+ +..+.++.+++... .|.++ ||+ +.+.+.+.
T Consensus 34 A~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~---------~PviaD~d~Gyg--~~~~~~~~ 102 (287)
T 3b8i_A 34 ARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAR---------LPVIADADHGYG--NALNVMRT 102 (287)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCS---------SCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEEECCCCCC--CHHHHHHH
Confidence 6677889999998862 32221 22345555544321 24333 343 45555555
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIK 245 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~ 245 (442)
...+..+|+..|++-....+- |...+ =.+.++..++++.+++....-|+ .|.--. |+.....+.+.+-++...+
T Consensus 103 v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~-~i~aRt-daa~~gl~~ai~Ra~ay~e 179 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPAL-TIIART-NAELIDVDAVIQRTLAYQE 179 (287)
T ss_dssp HHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTS-EEEEEE-ETTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCc-EEEEec-hhhhcCHHHHHHHHHHHHH
Confidence 554555799999998776431 22222 24666776666555544332222 122222 3333456788888899999
Q ss_pred cCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 246 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 246 ~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
+|||.|.+. |.-.++++.++.+. ++ +|+-+--.+..++ -+.-.--+.|++.|-....
T Consensus 180 AGAd~i~~e---~~~~~~~~~~i~~~----~~----~P~ii~~~g~~~~--~~~~eL~~lGv~~v~~~~~ 236 (287)
T 3b8i_A 180 AGADGICLV---GVRDFAHLEAIAEH----LH----IPLMLVTYGNPQL--RDDARLARLGVRVVVNGHA 236 (287)
T ss_dssp TTCSEEEEE---CCCSHHHHHHHHTT----CC----SCEEEECTTCGGG--CCHHHHHHTTEEEEECCCH
T ss_pred cCCCEEEec---CCCCHHHHHHHHHh----CC----CCEEEeCCCCCCC--CCHHHHHHcCCcEEEEChH
Confidence 999999986 44445666555444 43 2232322222222 1223444668888755443
No 236
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=88.67 E-value=23 Score=36.17 Aligned_cols=201 Identities=17% Similarity=0.107 Sum_probs=123.6
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCC-hH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC---------
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATS-GI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--------- 229 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~S-d~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas--------- 229 (442)
..+.+.++.+.++|+..|+|-..+. +- |+.-|-=.+.++.+++++.+...+...|.+.|.+.=.|+-
T Consensus 163 ~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~ 242 (429)
T 1f8m_A 163 LNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDV 242 (429)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCC
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccc
Confidence 3455666667778999999988763 21 2111111478999999988877777778753322112321
Q ss_pred --------------------CCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 013498 230 --------------------RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 289 (442)
Q Consensus 230 --------------------r~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~H 289 (442)
+...+..++-++...+ |||.|.+. .|.-.++++.++.+.++..+|. ..+.+=+-
T Consensus 243 d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e--~~~~~~eei~~f~~~v~~~~P~---~~La~n~s 316 (429)
T 1f8m_A 243 DERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWME--TGTPDLEAARQFSEAVKAEYPD---QMLAYNCS 316 (429)
T ss_dssp STTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHTTCTT---CEEEEECC
T ss_pred cccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeC--CCCCCHHHHHHHHHHhcccCCC---ceeecCCC
Confidence 1345556555666666 89988874 2447899999999999977774 23432221
Q ss_pred CCcc----hH---HHH-HHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHH
Q 013498 290 NDLG----LS---TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 361 (442)
Q Consensus 290 NDlG----LA---~AN-alaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~ 361 (442)
-.+- |. +++ .-..-+.|+.++-.++.+ =|+-+.++++++..+...|. .. ...|.+ .++.+
T Consensus 317 Psf~w~~~~~~~~~~~f~~eL~~lG~~~v~~~l~~--~raa~~a~~~~a~~~~~~G~------~a---y~e~Q~-~e~~~ 384 (429)
T 1f8m_A 317 PSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAG--FHALNYSMFDLAYGYAQNQM------SA---YVELQE-REFAA 384 (429)
T ss_dssp TTSCHHHHCCHHHHHHHHHHHHHHTEEEEEETTHH--HHHHHHHHHHHHHHHHHHTH------HH---HHHHHH-HHHHH
T ss_pred CCCCcccccchhhHhHHHHHHHHcCCeEEEECcHH--HHHHHHHHHHHHHHHHHcCC------hH---HHHHhH-HHHhh
Confidence 1111 00 011 224445799998777774 47788899999888876531 00 111211 12233
Q ss_pred HHhCCCCCCCCccccchhhh
Q 013498 362 EYTGLHVQPHKAIVGANAFA 381 (442)
Q Consensus 362 ~~~g~~i~~~~pivG~~aF~ 381 (442)
+..|+..-.++..+|.+.|-
T Consensus 385 ~~~g~~~~~hq~~~G~~~~d 404 (429)
T 1f8m_A 385 EERGYTATKHQREVGAGYFD 404 (429)
T ss_dssp GGGTCCTTSHHHHTTHHHHH
T ss_pred hccCcchhhhhhhhccchHH
Confidence 45888888899999998884
No 237
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=88.65 E-value=5 Score=38.84 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=89.5
Q ss_pred HHHHHHHHHhcccccccCCccceEeeecccch-hhHHHHHHHHHhCCCCEEEEeec---CChHHHHHH---hCCCHHHHH
Q 013498 131 EAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYAKRPRIHTFIA---TSGIHMEHK---LRKTKQQVV 203 (442)
Q Consensus 131 e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~e~l~~~g~~~v~i~~~---~Sd~h~~~~---l~~s~~e~l 203 (442)
+.+.++++++...+. -.|++++.+-..+ .++...++.++.+|+..+ +-.| .-|-+.+.+ -+++ +
T Consensus 79 ~iv~e~~~evlp~v~----~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~----~ 149 (286)
T 2p10_A 79 QIVVDMAREVLPVVR----HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMS----Y 149 (286)
T ss_dssp HHHHHHHHHHGGGCS----SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCC----H
T ss_pred HHHHHHHHhhhccCC----CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCC----H
Confidence 345555555432221 2477777554432 467778888999999988 4334 223233333 2556 4
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec--c----Cccccc------C-HHHHHHHHH
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--P----DTVGIT------M-PTEFGKLIA 270 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l--a----DT~G~~------~-P~~v~~li~ 270 (442)
++..++|+.|+++|+..+.+. .++ +-++.+.++|+|.|.+ . -+.|.- . |+.+.+.++
T Consensus 150 ~~eve~I~~A~~~gL~Ti~~v------~~~----eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~ 219 (286)
T 2p10_A 150 AQEVEMIAEAHKLDLLTTPYV------FSP----EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIE 219 (286)
T ss_dssp HHHHHHHHHHHHTTCEECCEE------CSH----HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEec------CCH----HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHH
Confidence 455679999999998532221 123 3455667899997553 4 333433 1 667788888
Q ss_pred HHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh--CCCEE
Q 013498 271 DIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA--GARQV 310 (442)
Q Consensus 271 ~l~~~~p~~~~v~i~~H~HNDlGLA~-ANalaAl~a--Ga~~v 310 (442)
.+++.-|+ +.+-.|.= |.+. --+..+++. |++.+
T Consensus 220 a~~~vnpd---vivLc~gG---pIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 220 AARTIRDD---IIILSHGG---PIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHHHHCSC---CEEEEEST---TCCSHHHHHHHHHHCTTCCEE
T ss_pred HHHHhCCC---cEEEecCC---CCCCHHHHHHHHhcCCCccEE
Confidence 88887774 56666651 2222 245566677 87655
No 238
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=88.45 E-value=2.2 Score=41.41 Aligned_cols=86 Identities=15% Similarity=0.096 Sum_probs=73.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+.+...+. .++|-+|. +|+.--++..+..|-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~-rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGT-KVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTS-SCEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCC-CCeEEEeCCCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999985 78999999999998876541 26677765 689999999999999
Q ss_pred HhCCCEEEecc
Q 013498 304 CAGARQVEVTI 314 (442)
Q Consensus 304 ~aGa~~vd~Tv 314 (442)
++||+.+=...
T Consensus 101 ~~Gadavlv~~ 111 (301)
T 3m5v_A 101 EHGADGILSVA 111 (301)
T ss_dssp HTTCSEEEEEC
T ss_pred HcCCCEEEEcC
Confidence 99999986654
No 239
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.40 E-value=19 Score=34.79 Aligned_cols=193 Identities=14% Similarity=0.085 Sum_probs=116.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAW 169 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~ 169 (442)
.+..+.-.++++.|.+.|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+-
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-------grvpViaGvg~~~t~~ai~la~ 100 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-------GKIKLIAHVGCVSTAESQQLAA 100 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-------TTSEEEEECCCSSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-------CCCcEEEecCCCCHHHHHHHHH
Confidence 377888899999999999999877 4 455566664 45555555542 2357888877655444 45443
Q ss_pred HHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHcC
Q 013498 170 EAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~G 247 (442)
.+ ..+|++.+-+..|-- ++.|.++.++-....++.. + ++.-+-++.+. ....+++.+.+++ + -
T Consensus 101 ~A-~~~Gadavlv~~P~y-------~~~s~~~l~~~f~~va~a~-~-~lPiilYn~P~~tg~~l~~~~~~~La----~-~ 165 (303)
T 2wkj_A 101 SA-KRYGFDAVSAVTPFY-------YPFSFEEHCDHYRAIIDSA-D-GLPMVVYNIPALSGVKLTLDQINTLV----T-L 165 (303)
T ss_dssp HH-HHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHHH-T-TCCEEEEECHHHHCCCCCHHHHHHHH----T-S
T ss_pred HH-HhCCCCEEEecCCCC-------CCCCHHHHHHHHHHHHHhC-C-CCCEEEEeCccccCCCCCHHHHHHHh----c-C
Confidence 33 456999887765532 2447777776666655433 2 25534555432 3346777777665 2 2
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLE 327 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lE 327 (442)
...+.+.||.|- ..++.++++. .++ .. -+-+.++ ..+.++..|++.+ +.| .+|...+
T Consensus 166 pnIvgiK~s~gd--~~~~~~~~~~----~~~---f~-v~~G~d~------~~~~~l~~G~~G~---is~----~an~~P~ 222 (303)
T 2wkj_A 166 PGVGALXQTSGD--LYQMEQIRRE----HPD---LV-LYNGYDN------IFASGLLAGADGG---IGS----TYNIMGW 222 (303)
T ss_dssp TTEEEEEECCCC--HHHHHHHHHH----CTT---CE-EEECCGG------GHHHHHHHTCCEE---EET----THHHHHH
T ss_pred CCEEEEeCCCCC--HHHHHHHHHh----CCC---eE-EEeCcHH------HHHHHHHCCCCEE---EeC----HHHhCHH
Confidence 679999999985 3455555542 232 21 1223332 2456777887654 322 3566666
Q ss_pred HHHHHHH
Q 013498 328 EVVMAFK 334 (442)
Q Consensus 328 evv~~L~ 334 (442)
.++...+
T Consensus 223 ~~~~l~~ 229 (303)
T 2wkj_A 223 RYQGIVK 229 (303)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 240
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=88.37 E-value=5.2 Score=41.16 Aligned_cols=149 Identities=11% Similarity=0.140 Sum_probs=80.0
Q ss_pred eEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEcc----CCC---C-hhHHHH----HHHHHHHhccccccc
Q 013498 80 VRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGF----PAA---S-KEDFEA----VRTIAKEVGNAVDAE 147 (442)
Q Consensus 80 V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~----p~~---~-~~d~e~----v~~l~~~~~~~~~~~ 147 (442)
.-|+-+|. |-..--| ++.++.++.++.+.+.|-++|.+|. |++ + ++|++. ++.+.+..+. ...
T Consensus 194 MGIlNvTP-DSFsDgg--~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~-~~~- 268 (442)
T 3mcm_A 194 MGIVNLSN-QSFSDGN--FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLAN-LIY- 268 (442)
T ss_dssp EEEEECSS-CC-CCCS--SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTT-CSS-
T ss_pred EEEEeCCC-CCCCCCC--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccc-cCC-
Confidence 44677776 4443333 7888999999999999999999996 332 1 234443 3333331000 000
Q ss_pred CCccceEeeecccchhhHHHHHHHHHhCCCCE-EEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 148 SGYVPVICGLSRCNERDIKTAWEAVKYAKRPR-IHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 148 ~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~-v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
. +| |+ .--.+.+-++.|++.. +|.+. |+ .+|- . . -.++++.+++.|+. |....+
T Consensus 269 -~-vp-IS-IDT~~~~VaeaAL~~~--aGa~i~IN---DVsg--------~-~------d~~m~~v~a~~g~~-vVlMh~ 323 (442)
T 3mcm_A 269 -K-PL-VS-IDTRKLEVMQKILAKH--HDIIWMIN---DVEC--------N-N------IEQKAQLIAKYNKK-YVIIHN 323 (442)
T ss_dssp -C-CE-EE-EECCCHHHHHHHHHHH--GGGCCEEE---ECCC--------T-T------HHHHHHHHHHHTCE-EEEECC
T ss_pred -C-Ce-EE-EeCCCHHHHHHHHhhC--CCCCEEEE---cCCC--------C-C------ChHHHHHHHHhCCe-EEEECC
Confidence 0 11 22 2223566677777632 36666 54 3331 0 0 12566677788875 444322
Q ss_pred CCCC--------CC-----HHHHHHHHHHHHHcCC--cEEeccCc-ccc
Q 013498 227 DAGR--------SD-----RKFLYEILGEVIKVGA--TTLNIPDT-VGI 259 (442)
Q Consensus 227 dasr--------~d-----~~~l~~~~~~~~~~Ga--d~I~laDT-~G~ 259 (442)
...- .| .+++.+.++.+.++|+ +.|.| |- +|.
T Consensus 324 ~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Iil-DPGiGF 371 (442)
T 3mcm_A 324 LGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYF-DIGFGF 371 (442)
T ss_dssp ----------------CTHHHHHHHHHHHHHHHTCCGGGEEE-ECCCC-
T ss_pred CCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEE-eCCCCC
Confidence 2110 01 4678888889999998 44554 54 443
No 241
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=88.32 E-value=1.8 Score=40.53 Aligned_cols=67 Identities=18% Similarity=0.381 Sum_probs=52.0
Q ss_pred HHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccc
Q 013498 240 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 240 ~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
++.+.++|+|.|.+ |+.....|....++++.+++. + +.+..=+|+ ...+..|.++|+++|=+++.|+
T Consensus 94 i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g---~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (229)
T 3q58_A 94 VDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--G---LLAMADCST-----VNEGISCHQKGIEFIGTTLSGY 160 (229)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--T---CEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--C---CEEEEecCC-----HHHHHHHHhCCCCEEEecCccC
Confidence 55678899998855 887778899999999999874 2 455555665 5677899999999996666665
No 242
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=88.25 E-value=9.2 Score=37.04 Aligned_cols=131 Identities=14% Similarity=0.027 Sum_probs=82.1
Q ss_pred CCCCEEEEee-cCChHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 013498 175 AKRPRIHTFI-ATSGIHMEHK-LRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (442)
Q Consensus 175 ~g~~~v~i~~-~~Sd~h~~~~-l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~ 252 (442)
+|++.|.+.- +++-.+-..- .-.|.++.+..++...+- .... |...++.. .-+++.+.+.++.+.++|+..|.
T Consensus 34 aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~---~~~P-viaD~d~G-yg~~~~~~~~v~~l~~aGa~gv~ 108 (290)
T 2hjp_A 34 AGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIAST---VSIP-LIADIDTG-FGNAVNVHYVVPQYEAAGASAIV 108 (290)
T ss_dssp HTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTT---CSSC-EEEECTTT-TSSHHHHHHHHHHHHHHTCSEEE
T ss_pred cCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc---CCCC-EEEECCCC-CCCHHHHHHHHHHHHHhCCeEEE
Confidence 4888776542 2221110001 124677777766554432 3344 77777666 34899999999999999999999
Q ss_pred ccCccc-------------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCC-----cchHHHHHHHHHHhCCCEEE
Q 013498 253 IPDTVG-------------ITMPTEFGKLIADIKANTPGIENVVISTHCQND-----LGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 253 laDT~G-------------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HND-----lGLA~ANalaAl~aGa~~vd 311 (442)
|-|.++ ....+++.+.|+.+++.-.. .+..|-.-+-.. +--++.-+.+..+|||+.|=
T Consensus 109 iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~-~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~ 184 (290)
T 2hjp_A 109 MEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD-RDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAIL 184 (290)
T ss_dssp EECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS-TTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred EcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc-CCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEE
Confidence 999973 33344677788888776321 124444444332 24466677788888998863
No 243
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=88.25 E-value=1.8 Score=41.65 Aligned_cols=153 Identities=14% Similarity=0.141 Sum_probs=75.4
Q ss_pred HHHHHHHHHhCCCCEEEEeecCChHHH--------HHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC-CCCCCHHH
Q 013498 165 IKTAWEAVKYAKRPRIHTFIATSGIHM--------EHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRSDRKF 235 (442)
Q Consensus 165 I~~a~e~l~~~g~~~v~i~~~~Sd~h~--------~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed-asr~d~~~ 235 (442)
++.+++.....|.+.|.+......... ........+...+.+.+++++|++.|+. +.+-... ..-.+++.
T Consensus 113 ~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~ 191 (340)
T 2zds_A 113 IKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVR-FAHEVHPSEIAYDYWT 191 (340)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEECCTTSSCCSHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCE-EEEEcCCCcccCCHHH
Confidence 445566666678998887543210000 0000011235566777888899999974 5553321 12246666
Q ss_pred HHHHHHHHHHcC-CcEEec-cCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCC-----
Q 013498 236 LYEILGEVIKVG-ATTLNI-PDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGA----- 307 (442)
Q Consensus 236 l~~~~~~~~~~G-ad~I~l-aDT~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa----- 307 (442)
+.++++.+ + .+.+.+ -||.=...- ....+.++.+.. -...+|.+|..+--. ...|.
T Consensus 192 ~~~ll~~v---~~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~------~~~g~~~~~~ 255 (340)
T 2zds_A 192 THRALEAV---GHRPAFGLNFDPSHFVWQDLDPVGFLWDFRD-------RIYHVDCKEARKRLD------GRNGRLGSHL 255 (340)
T ss_dssp HHHHHHHT---TTCTTEEEEECCHHHHHTTCCHHHHHHHTGG-------GEEEEEECEEEECCC------SSSCTTCTTC
T ss_pred HHHHHHhc---CCCCCeeEEEchhhHHHhCCCHHHHHHHHHh-------hEEEEEeccCccccc------cccccccccC
Confidence 66666544 4 332333 366421110 112223333221 356889988642100 00011
Q ss_pred ------CEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 308 ------RQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 308 ------~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
+.-. ..-+|+ |..+..+++..|+..|.
T Consensus 256 ~~~~~~r~~~--~~~~G~--G~id~~~i~~~L~~~gy 288 (340)
T 2zds_A 256 PWGDPRRGWD--FVSAGH--GDVPWEDVFRMLRSIDY 288 (340)
T ss_dssp CTTCTTSSEE--EECTTS--SCCCHHHHHHHHHHTTC
T ss_pred Ccccccccce--ecCCCC--CccCHHHHHHHHHhcCC
Confidence 1000 112443 88999999999998763
No 244
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=88.25 E-value=2.2 Score=41.14 Aligned_cols=156 Identities=13% Similarity=0.197 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhHcCCCEEEEcc-CC----------------CChhHHHHHHHHHHHhcccccccCCccceEeeeccc-c
Q 013498 100 SKEKLDIARQLAKLGVDIIEAGF-PA----------------ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRC-N 161 (442)
Q Consensus 100 ~e~kl~ia~~L~~~GV~~IEvG~-p~----------------~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~-~ 161 (442)
.+.-..+.+...+.|+..+--=| |. ..-+++..++.+++.. .|++.--+.. +
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~----------kPV~lk~G~~~t 157 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSG----------KPVLLKRGFGNT 157 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHT----------CCEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccC----------CeEEEcCCCCCC
Confidence 45555555666778887663211 11 0112345666666531 2455444443 7
Q ss_pred hhhHHHHHHHHHhCCCCEEEEee-cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccCCCCCCCHHHHHHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPEDAGRSDRKFLYEI 239 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~-~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f~~edasr~d~~~l~~~ 239 (442)
.++++.|++.+...|.+.+.+.- +++..- +-+++ .++ ...+...|+. |+. |.+.+ +-+.-..+++..+
T Consensus 158 ~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp-----~y~~~-~vd--l~~i~~lk~~~~lp-Vi~ds-sH~~g~~~~~~~~ 227 (276)
T 1vs1_A 158 VEELLAAAEYILLEGNWQVVLVERGIRTFE-----PSTRF-TLD--VAAVAVLKEATHLP-VIVDP-SHPAGRRSLVPAL 227 (276)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBCCSC-----CSSSS-BCB--HHHHHHHHHHBSSC-EEECC-HHHHCSGGGHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeCCcCCCC-----CcCcc-hhC--HHHHHHHHHHhCCC-EEEeC-CCCCCccchHHHH
Confidence 79999999998888887776654 332100 00000 011 1233444554 776 65433 2122344677788
Q ss_pred HHHHHHcCCc--EEe--------ccCcccccCHHHHHHHHHHHHHh
Q 013498 240 LGEVIKVGAT--TLN--------IPDTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 240 ~~~~~~~Gad--~I~--------laDT~G~~~P~~v~~li~~l~~~ 275 (442)
...++..||+ .|- ++|-.=.+.|+++.++++.+++.
T Consensus 228 ~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i~~~ 273 (276)
T 1vs1_A 228 AKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWH 273 (276)
T ss_dssp HHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHHHHH
Confidence 8888889999 332 36888999999999999999864
No 245
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=88.16 E-value=6.6 Score=37.33 Aligned_cols=146 Identities=18% Similarity=0.171 Sum_probs=85.0
Q ss_pred HHHHHhHcCCCEEEEcc---------CCCC----hhHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 106 IARQLAKLGVDIIEAGF---------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 106 ia~~L~~~GV~~IEvG~---------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
-++.++++|++.|=+|. |... .+....++.+++... .|.++ ||.... ++.+
T Consensus 32 sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~---------~pviaD~~~Gyg~~~---~~~~ 99 (255)
T 2qiw_A 32 SAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVS---------IPVSVDVESGYGLSP---ADLI 99 (255)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCS---------SCEEEECTTCTTCCH---HHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCC---------CCEEeccCCCcCcHH---HHHH
Confidence 36778889999998872 3211 122455666665432 13332 222111 4444
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC---CCC----CHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA---GRS----DRKFLYEILG 241 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda---sr~----d~~~l~~~~~ 241 (442)
.+.. .+|+..|++-... |...+-=.+.++..++++.+++.+++.|.+.+...=.|. ++. ..+.+.+-++
T Consensus 100 ~~l~-~aGa~gv~iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 100 AQIL-EAGAVGINVEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHH-HTTCCEEEECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHH-HcCCcEEEECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 3333 4799999987664 322121136788888888888888877876222211121 222 2577778888
Q ss_pred HHHHcCCcEEeccCcccccCHHHHHHHHH
Q 013498 242 EVIKVGATTLNIPDTVGITMPTEFGKLIA 270 (442)
Q Consensus 242 ~~~~~Gad~I~laDT~G~~~P~~v~~li~ 270 (442)
.+.++|||.|.+. |.-.++++.++.+
T Consensus 176 a~~eAGAd~i~~e---~~~~~~~~~~i~~ 201 (255)
T 2qiw_A 176 LMEQAGARSVYPV---GLSTAEQVERLVD 201 (255)
T ss_dssp HHHHHTCSEEEEC---CCCSHHHHHHHHT
T ss_pred HHHHcCCcEEEEc---CCCCHHHHHHHHH
Confidence 8999999999994 3333455544443
No 246
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=88.07 E-value=4.7 Score=36.61 Aligned_cols=158 Identities=16% Similarity=0.129 Sum_probs=85.8
Q ss_pred HHHHHHHHhHcCCCEEEEccCCCChhHH----HHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 103 KLDIARQLAKLGVDIIEAGFPAASKEDF----EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEvG~p~~~~~d~----e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
-.+.++.+.+.|++.|++..+..++.++ +.++.+.+.... . + ++.+. .++++.+.++ |.+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~----~-~-v~v~v------~~~~~~a~~~----gad 96 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACRE----A-G-VPFIV------NDDVELALNL----KAD 96 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHH----H-T-CCEEE------ESCHHHHHHH----TCS
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHH----c-C-CeEEE------cCHHHHHHHc----CCC
Confidence 4677888999999999999765555443 334444332111 0 1 12221 2456666665 889
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec---cC
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI---PD 255 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l---aD 255 (442)
.|++ +..+. . +..+ .+..|...+.+++ .+++. ++.+.+.|+|.|.+ -|
T Consensus 97 ~v~l--~~~~~--------~----~~~~------~~~~g~~~~~~s~-----~t~~e----~~~a~~~g~d~v~~~~v~~ 147 (227)
T 2tps_A 97 GIHI--GQEDA--------N----AKEV------RAAIGDMILGVSA-----HTMSE----VKQAEEDGADYVGLGPIYP 147 (227)
T ss_dssp EEEE--CTTSS--------C----HHHH------HHHHTTSEEEEEE-----CSHHH----HHHHHHHTCSEEEECCSSC
T ss_pred EEEE--CCCcc--------C----HHHH------HHhcCCcEEEEec-----CCHHH----HHHHHhCCCCEEEECCCcC
Confidence 8876 33221 1 1111 1223421244443 23443 34455789999985 45
Q ss_pred cccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 256 TVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 256 T~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
|..- ..|.. .++++.+++.+++ +++.. .-|....|.-.++++|++.|.+.
T Consensus 148 t~~~~~~~~~~~-~~~l~~~~~~~~~---~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 148 TETKKDTRAVQG-VSLIEAVRRQGIS---IPIVG----IGGITIDNAAPVIQAGADGVSMI 200 (227)
T ss_dssp CCSSSSCCCCCT-THHHHHHHHTTCC---CCEEE----ESSCCTTTSHHHHHTTCSEEEES
T ss_pred CCCCCCCCCccC-HHHHHHHHHhCCC---CCEEE----EcCCCHHHHHHHHHcCCCEEEEh
Confidence 5321 22222 3456666665541 33433 24566667778888999998764
No 247
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=87.88 E-value=9 Score=37.06 Aligned_cols=181 Identities=13% Similarity=0.072 Sum_probs=101.4
Q ss_pred CCHHHHHHHHHHHhHcC----CCEEE-Ecc---CCCChh------HHHHHHHHHHHhcccccccCCccceEeeecccchh
Q 013498 98 LTSKEKLDIARQLAKLG----VDIIE-AGF---PAASKE------DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNER 163 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~G----V~~IE-vG~---p~~~~~------d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~ 163 (442)
=+.++.+++++.|.++| +..+= .+| |..++. ..+-++.+.+..... ++ +.++ .-...+
T Consensus 31 e~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~-----Gl-p~~T--ev~d~~ 102 (285)
T 3sz8_A 31 ESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF-----GV-PVIT--DVHEAE 102 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH-----CC-CEEE--ECCSGG
T ss_pred CCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc-----CC-eEEE--EeCCHH
Confidence 47899999999998764 66443 333 444442 123444443332110 22 2222 123556
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHH
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEV 243 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~ 243 (442)
+++...+ . ++.+.| +..+. +. . ++++++.+.|.. |.+.- ..-.+++++...++.+
T Consensus 103 ~v~~l~~----~-vd~lqI--gA~~~--------~n---~----~LLr~va~~gkP-VilK~--G~~~t~~ei~~ave~i 157 (285)
T 3sz8_A 103 QAAPVAE----I-ADVLQV--PAFLA--------RQ---T----DLVVAIAKAGKP-VNVKK--PQFMSPTQLKHVVSKC 157 (285)
T ss_dssp GHHHHHT----T-CSEEEE--CGGGT--------TC---H----HHHHHHHHTSSC-EEEEC--CTTSCGGGTHHHHHHH
T ss_pred HHHHHHH----h-CCEEEE--Ccccc--------CC---H----HHHHHHHccCCc-EEEeC--CCCCCHHHHHHHHHHH
Confidence 6664433 2 566654 33221 11 1 144555567876 77743 1224666777888888
Q ss_pred HHcCCcEEeccCcccccCHHHH----HHHHHHHHHhCCCCcceeEEE-eecC-------------CcchHHHHHHHHHHh
Q 013498 244 IKVGATTLNIPDTVGITMPTEF----GKLIADIKANTPGIENVVIST-HCQN-------------DLGLSTANTIAGACA 305 (442)
Q Consensus 244 ~~~Gad~I~laDT~G~~~P~~v----~~li~~l~~~~p~~~~v~i~~-H~HN-------------DlGLA~ANalaAl~a 305 (442)
.+.|-+.|.|+.-.-.. |..- -.-+..+++.+++ ++|++ ..|- +..+...-+++|+.+
T Consensus 158 ~~~Gn~~i~L~erg~~y-~~~~~~vdl~~i~~lk~~~~~---~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~ 233 (285)
T 3sz8_A 158 GEVGNDRVMLCERGSSF-GYDNLVVDMLGFRQMAETTGG---CPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAV 233 (285)
T ss_dssp HHTTCCCEEEEECCEEC-SSSCEECCTTHHHHHHHHTTS---CCEEEETTTTCC---------------HHHHHHHHHHH
T ss_pred HHcCCCcEEEEeCCCCC-CCCcCccCHHHHHHHHHhCCC---CCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHh
Confidence 89998888887643322 2211 2345667887753 67888 6775 222446678999999
Q ss_pred CCC--EEEeccc
Q 013498 306 GAR--QVEVTIN 315 (442)
Q Consensus 306 Ga~--~vd~Tv~ 315 (442)
||+ .|+.=..
T Consensus 234 GA~gl~IE~H~~ 245 (285)
T 3sz8_A 234 GIAGLFLEAHPD 245 (285)
T ss_dssp CCSEEEEEEESC
T ss_pred CCCEEEEEeccC
Confidence 999 7765444
No 248
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=87.88 E-value=0.54 Score=45.34 Aligned_cols=134 Identities=16% Similarity=0.077 Sum_probs=86.0
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc---CCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP---EDAGRSDRKFLYEILGEVIKVGATTLN 252 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~---edasr~d~~~l~~~~~~~~~~Gad~I~ 252 (442)
=+|.+.+--.+|-+ ..++++.|+.++++|+ .|+++- |.+-.. ..+.++++.+.+.|-+.|-
T Consensus 65 yID~lKfg~GTs~l-------------~~~l~ekI~l~~~~gV-~v~~GGTlfE~~l~q--g~~~~yl~~~k~lGF~~IE 128 (276)
T 1u83_A 65 YIDFVKFGWGTSLL-------------TKDLEEKISTLKEHDI-TFFFGGTLFEKYVSQ--KKVNEFHRYCTYFGCEYIE 128 (276)
T ss_dssp GCCEEEECTTGGGG-------------CTTHHHHHHHHHHTTC-EEEECHHHHHHHHHT--TCHHHHHHHHHHTTCSEEE
T ss_pred hcceEEecCcchhh-------------hHHHHHHHHHHHHcCC-eEeCCcHHHHHHHHc--CcHHHHHHHHHHcCCCEEE
Confidence 46777776666543 1226788999999998 488764 221111 1566788899999999999
Q ss_pred ccCcccccCHHHHHHHHHHHHHhCCCCcceeEEE-------eecCCcchHHHHHHHHHHhCCCEE--Ee---cccccccc
Q 013498 253 IPDTVGITMPTEFGKLIADIKANTPGIENVVIST-------HCQNDLGLSTANTIAGACAGARQV--EV---TINGIGER 320 (442)
Q Consensus 253 laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~-------H~HNDlGLA~ANalaAl~aGa~~v--d~---Tv~GlGer 320 (442)
|.|-.--+.+++-.++|+.+++.+ .+..++ ..=-+...-+..+...++|||+.| ++ .-.|+=+.
T Consensus 129 ISdGti~l~~~~~~~lI~~a~~~f----~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~ 204 (276)
T 1u83_A 129 ISNGTLPMTNKEKAAYIADFSDEF----LVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSS 204 (276)
T ss_dssp ECCSSSCCCHHHHHHHHHHHTTTS----EEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC------------
T ss_pred ECCCcccCCHHHHHHHHHHHHhhc----EEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccCC
Confidence 999999999999999999887764 133332 333566777889999999999995 44 11377788
Q ss_pred cCcccHHHH
Q 013498 321 AGNASLEEV 329 (442)
Q Consensus 321 aGNa~lEev 329 (442)
.||.-.+.+
T Consensus 205 ~g~~r~d~v 213 (276)
T 1u83_A 205 SGDVRFQIV 213 (276)
T ss_dssp ------CCH
T ss_pred CCCCcHHHH
Confidence 898877655
No 249
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=87.86 E-value=5.2 Score=39.61 Aligned_cols=158 Identities=9% Similarity=0.066 Sum_probs=95.9
Q ss_pred chhhHHHH-HHH---HHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCCC-eEEEccCCCCCCCHH
Q 013498 161 NERDIKTA-WEA---VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-LGCD-DVEFSPEDAGRSDRK 234 (442)
Q Consensus 161 ~~~dI~~a-~e~---l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~-~G~~-~V~f~~edasr~d~~ 234 (442)
.++|+.+. ++. ...-|+..+.++. ++ +....-|.+.+++++.+.+.++.+++ .|+. .+.+++. -..+++
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~--~P-~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~--R~~~~~ 149 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMM--DP-QAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL--RDMSED 149 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEE--CH-HHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE--TTSCHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEe--cH-HHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC--CCCCHH
Confidence 45666443 222 2234665555543 33 33335688999999999888887754 5763 1233332 334677
Q ss_pred HHHHHHHHHHHc--CCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEE
Q 013498 235 FLYEILGEVIKV--GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 311 (442)
Q Consensus 235 ~l~~~~~~~~~~--Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~-aGa~~vd 311 (442)
...+.++.+.+. ++..|-|+=.-....|..+.+.++..++. ++++.+|+....+ ..|...|+. .|++.|+
T Consensus 150 ~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~-----gl~~~~HagE~~~--~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 150 SALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA-----GLRRIAHAGEEGP--ASYITEALDVLHVERID 222 (343)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT-----TCEEEEEESSSSC--HHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC-----CCeEEEeeCCCCC--HHHHHHHHhcCCcceee
Confidence 777888877765 34445444222345678888888877764 3779999987755 357778897 8999863
Q ss_pred ecccccccccCcccHHHHHHHHHhcc
Q 013498 312 VTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 312 ~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
-|-+... =++++..|..++
T Consensus 223 -----Hgv~l~~--d~~l~~~l~~~~ 241 (343)
T 3rys_A 223 -----HGIRCME--DTDVVQRLVAEQ 241 (343)
T ss_dssp -----ECGGGGG--CHHHHHHHHHHT
T ss_pred -----eeeeecC--ChHHHHHHHhcC
Confidence 2222211 135666666653
No 250
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=87.78 E-value=8.2 Score=36.38 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=55.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCc-ceeEEEeecCCcchHHHHHHHHHHh
Q 013498 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIE-NVVISTHCQNDLGLSTANTIAGACA 305 (442)
Q Consensus 230 r~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~-~v~i~~H~HNDlGLA~ANalaAl~a 305 (442)
..+.+--..-++.+++.|||.|-+.=-+|. ..-+.+.+-|+.+++..++.. ++.|+.-.=++- .=..-+..|.++
T Consensus 91 ~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~e-ei~~a~~ia~~a 169 (239)
T 3ngj_A 91 ATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNE-EKVEVCKRCVAA 169 (239)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHH-HHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHH-HHHHHHHHHHHH
Confidence 333444444455566667776665555554 333455556666665543210 122222211111 112233456899
Q ss_pred CCCEEEecccccccccCcccHHHHHHHHHhcc
Q 013498 306 GARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 306 Ga~~vd~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
||++|.+|-+ . ..|++.+|++-.+.+..+
T Consensus 170 GADfVKTSTG-f--~~ggAt~~dv~lmr~~vg 198 (239)
T 3ngj_A 170 GAEYVKTSTG-F--GTHGATPEDVKLMKDTVG 198 (239)
T ss_dssp TCSEEECCCS-S--SSCCCCHHHHHHHHHHHG
T ss_pred CcCEEECCCC-C--CCCCCCHHHHHHHHHhhC
Confidence 9999999853 2 247788998776665543
No 251
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=87.61 E-value=6.3 Score=38.15 Aligned_cols=109 Identities=18% Similarity=0.106 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc----------ccCHHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG----------ITMPTEFG 266 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G----------~~~P~~v~ 266 (442)
.|.++.+..++..++- .... |...++.. .-+++.+.+.++.+.++|+..|.|-|.++ ...++++.
T Consensus 65 vt~~em~~~~~~I~r~---~~~P-viaD~d~G-yg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~ 139 (287)
T 3b8i_A 65 ITLSEFVEQATRIGRV---ARLP-VIADADHG-YGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGV 139 (287)
T ss_dssp SCHHHHHHHHHHHHTT---CSSC-EEEECTTC-SSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHH
T ss_pred CCHHHHHHHHHHHHhc---CCCC-EEEECCCC-CCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHH
Confidence 4778777766554432 3344 77777655 34899999999999999999999999974 45567788
Q ss_pred HHHHHHHHhCCCCcceeEEEeecC---CcchHHHHHHHHHHhCCCEEE
Q 013498 267 KLIADIKANTPGIENVVISTHCQN---DLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 267 ~li~~l~~~~p~~~~v~i~~H~HN---DlGLA~ANalaAl~aGa~~vd 311 (442)
+.|+.+++.-.+. +..|-.-+-. .+--++.-+.+..+|||+.|=
T Consensus 140 ~~I~aa~~a~~~~-~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~ 186 (287)
T 3b8i_A 140 GKIRAALEARVDP-ALTIIARTNAELIDVDAVIQRTLAYQEAGADGIC 186 (287)
T ss_dssp HHHHHHHHHCCST-TSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCC-CcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEE
Confidence 8999888763211 2344444322 223478888899999999873
No 252
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.56 E-value=12 Score=42.39 Aligned_cols=141 Identities=16% Similarity=0.143 Sum_probs=80.8
Q ss_pred cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEE--EccCCCCCCCHHHH
Q 013498 160 CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVE--FSPEDAGRSDRKFL 236 (442)
Q Consensus 160 ~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~--f~~edasr~d~~~l 236 (442)
.+.++...+.+.+..+|++.|.+-++..-......+|.+.....+.+.+.++.+|+. ++. |. +.+ +. +.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~P-v~vK~~~-~~-----~~~ 717 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP-FFAKLTP-NV-----TDI 717 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSC-EEEEECS-CS-----SCH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCc-eEEEeCC-Ch-----HHH
Confidence 367788778777777899988876543211112223322222234455566666654 444 43 332 21 246
Q ss_pred HHHHHHHHHcCCcEEeccCcc-------------------------cccCHH---HHHHHHHHHHHhCCCCcceeEEEee
Q 013498 237 YEILGEVIKVGATTLNIPDTV-------------------------GITMPT---EFGKLIADIKANTPGIENVVISTHC 288 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT~-------------------------G~~~P~---~v~~li~~l~~~~p~~~~v~i~~H~ 288 (442)
.++++.+.++|+|.|.+..|. |..-|. ...+++..+++.+++ ++|..=.
T Consensus 718 ~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~---ipvi~~G 794 (1025)
T 1gte_A 718 VSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPG---FPILATG 794 (1025)
T ss_dssp HHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTT---CCEEEES
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCC---CCEEEec
Confidence 788899999999999985432 111121 124688888888754 5555443
Q ss_pred cCCcchHHHHHHHHHHhCCCEEEec
Q 013498 289 QNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 289 HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
-=..+ ..+..++.+||+.|-..
T Consensus 795 GI~s~---~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 795 GIDSA---ESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp SCCSH---HHHHHHHHTTCSEEEES
T ss_pred CcCCH---HHHHHHHHcCCCEEEEe
Confidence 33333 34566667899988654
No 253
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=87.45 E-value=1.6 Score=40.93 Aligned_cols=197 Identities=17% Similarity=0.094 Sum_probs=92.4
Q ss_pred HHHHHHHHHhHcCCCEEEEccCCC----ChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 102 EKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+-.++++.+.+.|++.|++--+.. ...+++.++.+++... .|.+.+-.-.+.++++.++++ |+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~---------iPvi~~ggi~~~~~i~~~~~~----Ga 97 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTT---------LPIIASGGAGKMEHFLEAFLA----GA 97 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCC---------SCEEEESCCCSTHHHHHHHHH----TC
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcC---------CCEEEECCCCCHHHHHHHHHc----CC
Confidence 457889999999999999854321 1224677777765321 244443222356778777664 88
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEccC----C--------CCC-CCHHHHHHHHHH
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPE----D--------AGR-SDRKFLYEILGE 242 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G--~~~V~f~~e----d--------asr-~d~~~l~~~~~~ 242 (442)
+.|.+-...-+ . . ...+.+.++++ ..| ...+.++.. + ... .+.....+.++.
T Consensus 98 d~v~lg~~~~~--~-----~---~~~~~~~~~~~---~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 98 DKALAASVFHF--R-----E---IDMRELKEYLK---KHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp SEEECCCCC----------------CHHHHHHCC-------CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred cHhhhhHHHHh--C-----C---CCHHHHHHHHH---HcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 88765322210 0 0 01122333332 333 222222221 0 000 000013466677
Q ss_pred HHHcCCcEEeccC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEeccccccc
Q 013498 243 VIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVTINGIGE 319 (442)
Q Consensus 243 ~~~~Gad~I~laD--T~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd~Tv~GlGe 319 (442)
+.+.|++.|++.+ ..|...... .++++.+++.++ +|+-.= -|.. ..+...++++||+.|=+.=.=+
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~~----ipvia~----GGI~~~ed~~~~~~~Gadgv~vgsal~-- 233 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLTT----LPIIAS----GGAGKMEHFLEAFLAGADAALAASVFH-- 233 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSCCC-HHHHHHHGGGCC----SCEEEE----SCCCSHHHHHHHHHHTCSEEEESTTTC--
T ss_pred HHHcCCCEEEEEeecCCCCcCCCC-HHHHHHHHHHcC----CCEEEe----CCCCCHHHHHHHHHcCCHHHHccHHHH--
Confidence 7889999999854 335433221 456777777652 333321 4554 3677777788988763321111
Q ss_pred ccCcccHHHHHHHHHhc
Q 013498 320 RAGNASLEEVVMAFKCR 336 (442)
Q Consensus 320 raGNa~lEevv~~L~~~ 336 (442)
.+.-+++++...|...
T Consensus 234 -~~~~~~~~~~~~l~~~ 249 (266)
T 2w6r_A 234 -FREIDMRELKEYLKKH 249 (266)
T ss_dssp -----------------
T ss_pred -cCCCCHHHHHHHHHHC
Confidence 1222466666555543
No 254
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=87.39 E-value=30 Score=36.09 Aligned_cols=159 Identities=19% Similarity=0.222 Sum_probs=104.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.+|.+++..|.+.-.+.|+|.|-+-|. .+++|...++.+.+..+.. ...++-.. +.+.++..-+.+..
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SFV-r~a~Dv~~~r~~l~~~~~~-------~~iiaKIE--~~eav~nldeIl~~-- 271 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASFV-QSADDVRYIRGLLGPRGRH-------IRIIPKIE--NVEGLVNFDEILAE-- 271 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETTC-CSHHHHHHHHHHHTGGGTT-------CEEEEEEC--SHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHHHHHhcCCC-------CeEEEEEC--CHHHHHhHHHHHHh--
Confidence 368889888877888899999999776 5678887787766543221 11222222 34444332222222
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc------cCCCCCCCHHHHHHHHHHHHHcCCcE
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS------PEDAGRSDRKFLYEILGEVIKVGATT 250 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~------~edasr~d~~~l~~~~~~~~~~Gad~ 250 (442)
.+. ++++-.|+=.+ +..+++....+.+++.|+..|.. |.+. +....|-+..++-+++.++.+ |+|.
T Consensus 272 sDg--imVaRGDLgve----i~~e~v~~~qk~ii~~~~~~gkp-vi~ATQmLeSMi~~p~PTRAEvsDVAnAV~d-GaDa 343 (511)
T 3gg8_A 272 ADG--IMIARGDLGME----IPPEKVFLAQKMMIAKCNVVGKP-VITATQMLESMIKNPRPTRAEAADVANAVLD-GTDC 343 (511)
T ss_dssp CSC--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHTTCC-EEEESSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCe--EEEecchhcCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEehHHHHHhhcCCCccHHHHHHHHHHHHh-CCCE
Confidence 243 34455554332 35678888889999999999986 5552 234567777888888877764 9999
Q ss_pred Eecc-CcccccCHHHHHHHHHHHHHh
Q 013498 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 251 I~la-DT~G~~~P~~v~~li~~l~~~ 275 (442)
|-|. .|.---.|.+.-+.+..+.+.
T Consensus 344 vMLSgETA~G~yPveaV~~M~~I~~~ 369 (511)
T 3gg8_A 344 VMLSGETANGEFPVITVETMARICYE 369 (511)
T ss_dssp EEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHH
Confidence 9995 677778888877777666543
No 255
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=87.33 E-value=9.9 Score=37.87 Aligned_cols=140 Identities=14% Similarity=0.181 Sum_probs=81.9
Q ss_pred HHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCC
Q 013498 108 RQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATS 187 (442)
Q Consensus 108 ~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~S 187 (442)
+.|.+.|++.+-+|+.- -.++..++.+++.. .|.|..-+.++.++|+.|++.+...|.+ |.+.-++|
T Consensus 105 d~l~~~~v~~~KI~S~~--~~N~pLL~~va~~g----------KPviLstGmstl~Ei~~Ave~i~~~g~~-viLlhC~s 171 (350)
T 3g8r_A 105 DLIEAHGIEIIKIASCS--FTDWPLLERIARSD----------KPVVASTAGARREDIDKVVSFMLHRGKD-LTIMHCVA 171 (350)
T ss_dssp HHHHHTTCCEEEECSSS--TTCHHHHHHHHTSC----------SCEEEECTTCCHHHHHHHHHHHHTTTCC-EEEEECCC
T ss_pred HHHHHcCCCEEEECccc--ccCHHHHHHHHhhC----------CcEEEECCCCCHHHHHHHHHHHHHcCCC-EEEEecCC
Confidence 44455566666666542 34577888877631 2677666667999999999988877764 54432333
Q ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE---------eccCc
Q 013498 188 GIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL---------NIPDT 256 (442)
Q Consensus 188 d~h~~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I---------~laDT 256 (442)
. +-..+++ ++ ..+|...++. ++. |.++-=..+... .+..+++.+||+.| ..+|.
T Consensus 172 ~------YPt~~~~-~n--L~aI~~Lk~~fp~lp-VG~SdHt~g~~~-----~~~~AAvAlGA~vIEkH~tldr~~g~D~ 236 (350)
T 3g8r_A 172 E------YPTPDDH-LH--LARIKTLRQQYAGVR-IGYSTHEDPDLM-----EPIMLAVAQGATVFEKHVGLPTDQYGIN 236 (350)
T ss_dssp C------SSCCGGG-CC--TTHHHHHHHHCTTSE-EEEEECCCSSCC-----HHHHHHHHTTCCEEEEEBCCCBTTBCCC
T ss_pred C------CCCCccc-CC--HHHHHHHHHHCCCCC-EEcCCCCCCCcc-----HHHHHHHHcCCCEEEEecCcccCCCCcc
Confidence 2 1111111 11 1244445553 453 655411111221 24456778898754 24455
Q ss_pred ccccCHHHHHHHHHHHHHh
Q 013498 257 VGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 257 ~G~~~P~~v~~li~~l~~~ 275 (442)
.=.+.|+++.++++.+++.
T Consensus 237 ~~Sl~P~ef~~lv~~ir~i 255 (350)
T 3g8r_A 237 NYSANPEQVRRWLAAAARA 255 (350)
T ss_dssp TTCBCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHH
Confidence 5678999999999999864
No 256
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=87.27 E-value=3.7 Score=39.35 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHH-cCCcEEec--c--------CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 232 DRKFLYEILGEVIK-VGATTLNI--P--------DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 232 d~~~l~~~~~~~~~-~Gad~I~l--a--------DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
+++.+.+.++.+.+ +|+|.|.| . |..| ..|..+.++++.+++.+. ++|.+..--+..-...-+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~----~pv~vk~~~~~~~~~~~a~ 183 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSK----VPLYVKLSPNVTDIVPIAK 183 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCSHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcC----CCEEEEECCChHHHHHHHH
Confidence 57888899998888 99997644 2 3333 278889999999999873 5677665433322233356
Q ss_pred HHHHhCCCEEEecc
Q 013498 301 AGACAGARQVEVTI 314 (442)
Q Consensus 301 aAl~aGa~~vd~Tv 314 (442)
.+.++|++.|+++=
T Consensus 184 ~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 184 AVEAAGADGLTMIN 197 (311)
T ss_dssp HHHHTTCSEEEECC
T ss_pred HHHHcCCCEEEEeC
Confidence 77889999999853
No 257
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=87.24 E-value=11 Score=36.50 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCC---CCCCHHHHHHHHHHHHHc-CCc--EEeccCcccc-cCHHHHHHHHHHHHHhC
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDA---GRSDRKFLYEILGEVIKV-GAT--TLNIPDTVGI-TMPTEFGKLIADIKANT 276 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~eda---sr~d~~~l~~~~~~~~~~-Gad--~I~laDT~G~-~~P~~v~~li~~l~~~~ 276 (442)
+.+.+.++.|.+.|.+.+.+.+..- .+.+.+.+.+..+.+.++ +.. .-+++- .|. +.|+. +.+|.+.+
T Consensus 90 ~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~----~~~La~~~ 164 (309)
T 3fkr_A 90 QVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPF----LARMAREI 164 (309)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHH----HHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHH----HHHHHhhC
Confidence 4556778888999998666655543 467888888888888775 333 234554 465 44443 44444446
Q ss_pred CC
Q 013498 277 PG 278 (442)
Q Consensus 277 p~ 278 (442)
|+
T Consensus 165 pn 166 (309)
T 3fkr_A 165 EQ 166 (309)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 258
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=87.21 E-value=2.1 Score=42.60 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=49.6
Q ss_pred HHHHHHHHc--CCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 238 EILGEVIKV--GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 238 ~~~~~~~~~--Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
+.++.+.+. |++.+.+-=+.| .|..+.+.|+++++.+|+ ++|.+.. .+....+..|+++|||.|+++..
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~---~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQ---HTIMAGN----VVTGEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTT---SEEEEEE----ECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCC---CeEEEEe----CCCHHHHHHHHHhCCCEEEECCC
Confidence 345555565 888776532334 567788899999999864 5666543 44567888999999999999754
Q ss_pred c
Q 013498 316 G 316 (442)
Q Consensus 316 G 316 (442)
|
T Consensus 192 ~ 192 (351)
T 2c6q_A 192 P 192 (351)
T ss_dssp C
T ss_pred C
Confidence 3
No 259
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=87.09 E-value=3 Score=38.95 Aligned_cols=67 Identities=19% Similarity=0.372 Sum_probs=51.4
Q ss_pred HHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccc
Q 013498 240 LGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 240 ~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
++.+.++|+|.|.+ |+.....|....++++.+++. + +.+..=+|+ ...+..|.++|+++|=+++.|+
T Consensus 94 i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g---~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 94 VDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH--H---LLTMADCSS-----VDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--T---CEEEEECCS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--C---CEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccC
Confidence 55678899998855 777777899999999999874 2 455565665 5667889999999996666554
No 260
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.09 E-value=5.3 Score=38.51 Aligned_cols=98 Identities=8% Similarity=0.026 Sum_probs=64.4
Q ss_pred HhCCCCEEEEeecCChHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCC-CCHHHHHHHHHHHHH
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIK 245 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l------~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr-~d~~~l~~~~~~~~~ 245 (442)
..+|++.|- +..|-. + ..+ ..|.++.+..++...+-+ ....|...+++.+. .+++...+-+.++.+
T Consensus 34 e~aG~d~il--vGdSl~-~-~~lG~~dt~~vTldemi~h~~aV~r~~---~~~~vvaD~pfgsy~~s~~~a~~na~rl~k 106 (275)
T 1o66_A 34 DDAGVEMLL--VGDSLG-M-AVQGRKSTLPVSLRDMCYHTECVARGA---KNAMIVSDLPFGAYQQSKEQAFAAAAELMA 106 (275)
T ss_dssp HHTTCCEEE--ECTTHH-H-HTTCCSSSTTCCHHHHHHHHHHHHHHC---SSSEEEEECCTTSSSSCHHHHHHHHHHHHH
T ss_pred HHcCCCEEE--ECHHHH-H-HHcCCCCCCCCCHHHHHHHHHHHHhhC---CCCeEEEECCCCCccCCHHHHHHHHHHHHH
Confidence 346999773 333321 1 223 356788777665554432 22235567777565 578999999989999
Q ss_pred cCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 013498 246 VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 288 (442)
Q Consensus 246 ~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~ 288 (442)
+|++.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 107 aGa~aVklEdg------~e~~~~I~al~~a-----gIpV~gHi 138 (275)
T 1o66_A 107 AGAHMVKLEGG------VWMAETTEFLQMR-----GIPVCAHI 138 (275)
T ss_dssp TTCSEEEEECS------GGGHHHHHHHHHT-----TCCEEEEE
T ss_pred cCCcEEEECCc------HHHHHHHHHHHHc-----CCCeEeee
Confidence 99999999997 3677788888764 25566554
No 261
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.97 E-value=3.6 Score=40.11 Aligned_cols=127 Identities=14% Similarity=0.187 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHH
Q 013498 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 207 (442)
Q Consensus 129 d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~ 207 (442)
.++.++++++. + .|++.--+. ++.+|++.+++.+...|.+.|.+.-..+..- ..++-.+ +
T Consensus 144 n~~LLr~va~~-g---------kPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~-~~~~~vd----l---- 204 (298)
T 3fs2_A 144 QTDLLIAAART-G---------RVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSFG-YNTLVSD----M---- 204 (298)
T ss_dssp CHHHHHHHHHT-T---------SEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECS-SSCEECC----T----
T ss_pred CHHHHHHHHcc-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCC-CCCCccC----H----
Confidence 35677776653 1 244444343 4789999999998888888776653333110 0000000 1
Q ss_pred HHHHHHHHcCCCeEEEccCCC----------CCCCHHHHHHHHHHHHHcCCcEE----------eccCcccccCHHHHHH
Q 013498 208 SMVKFARSLGCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTL----------NIPDTVGITMPTEFGK 267 (442)
Q Consensus 208 ~~v~~ar~~G~~~V~f~~eda----------sr~d~~~l~~~~~~~~~~Gad~I----------~laDT~G~~~P~~v~~ 267 (442)
..+...|+.|+. |.|.+.-+ +--..+++..++.+++.+|||.+ .++|-.=.+.|+++.+
T Consensus 205 ~~i~~lk~~~~P-V~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tpd~al~D~~~sl~p~el~~ 283 (298)
T 3fs2_A 205 RALPIMAGLGAP-VIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPA 283 (298)
T ss_dssp THHHHHHTTTSC-EEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEESSGGGCSSSGGGCEEGGGHHH
T ss_pred HHHHHHHHcCCc-EEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCChhccCCchhhcCCHHHHHH
Confidence 123334556776 77732111 12345788899999999999833 2478888999999999
Q ss_pred HHHHHHHh
Q 013498 268 LIADIKAN 275 (442)
Q Consensus 268 li~~l~~~ 275 (442)
+++.+++.
T Consensus 284 lv~~ir~i 291 (298)
T 3fs2_A 284 LLEKLMAF 291 (298)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
No 262
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=86.94 E-value=7.1 Score=38.31 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCcEEeccCcc-cccCHHHHHHHH----HHHHHhCCCCc---ceeEEEeecCCcchHHHHHHHHHHhCC
Q 013498 236 LYEILGEVIKVGATTLNIPDTV-GITMPTEFGKLI----ADIKANTPGIE---NVVISTHCQNDLGLSTANTIAGACAGA 307 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~-G~~~P~~v~~li----~~l~~~~p~~~---~v~i~~H~HNDlGLA~ANalaAl~aGa 307 (442)
+.+.++...++|++.|.+.|+. |.+.|..+.+++ +.+.+.+.... ++++-.||.+. +.-+ .. -.+.|+
T Consensus 189 ~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~-~~~l-~~--l~~~g~ 264 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG-GQWL-EA--MAETGC 264 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT-TTTH-HH--HHTTSC
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH-HHHH-HH--HHhcCC
Confidence 3444556667899999999876 556787776555 33334443210 26677777765 3211 12 226799
Q ss_pred CEEEe
Q 013498 308 RQVEV 312 (442)
Q Consensus 308 ~~vd~ 312 (442)
+.++.
T Consensus 265 d~i~~ 269 (354)
T 3cyv_A 265 DALGL 269 (354)
T ss_dssp SEEEC
T ss_pred CEEEe
Confidence 99985
No 263
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=86.91 E-value=2.1 Score=43.26 Aligned_cols=157 Identities=15% Similarity=0.149 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHHHhHcCCCEE-EEccCCC----------------ChhHHHHHHHHHHHhcccccccCCccceEeeecc-
Q 013498 98 LTSKEKLDIARQLAKLGVDII-EAGFPAA----------------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR- 159 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~I-EvG~p~~----------------~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r- 159 (442)
++.+.-..+.+...+.|+..+ |+=.|.. .-..++.++.+++. + .|.+..-+.
T Consensus 190 l~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~lkIgs~~~~n~~LL~~~a~~---------g-kPVilk~G~~ 259 (385)
T 3nvt_A 190 LGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRV---------D-KPILLKRGLS 259 (385)
T ss_dssp CTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHHTS---------S-SCEEEECCTT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHcc---------C-CcEEEecCCC
Confidence 455666666667777887765 2211100 11234566665542 1 255554444
Q ss_pred cchhhHHHHHHHHHhCCCCEEEEeec-CChHHH--HHHhCCCHHHHHHHHHHHHHHHHH-cCCCeEEEccCCCCCCCHHH
Q 013498 160 CNERDIKTAWEAVKYAKRPRIHTFIA-TSGIHM--EHKLRKTKQQVVEIARSMVKFARS-LGCDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 160 ~~~~dI~~a~e~l~~~g~~~v~i~~~-~Sd~h~--~~~l~~s~~e~l~~~~~~v~~ar~-~G~~~V~f~~edasr~d~~~ 235 (442)
++.+++..|++.+...|.+.|.+.-. +|..-. ...+++ .++...|+ .|+. |.+.+.- +--+.++
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl----------~~i~~lk~~~~lp-V~~D~th-~~G~r~~ 327 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDI----------SAVPILKKETHLP-VMVDVTH-STGRKDL 327 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCT----------THHHHHHHHBSSC-EEEEHHH-HHCCGGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCH----------HHHHHHHHhcCCC-EEEcCCC-CCCccch
Confidence 68899999999988888876666543 442100 001122 12333444 5776 6443311 1123467
Q ss_pred HHHHHHHHHHcCCc--EE--------eccCcccccCHHHHHHHHHHHHHhC
Q 013498 236 LYEILGEVIKVGAT--TL--------NIPDTVGITMPTEFGKLIADIKANT 276 (442)
Q Consensus 236 l~~~~~~~~~~Gad--~I--------~laDT~G~~~P~~v~~li~~l~~~~ 276 (442)
+..++.+++.+||+ .| .++|..=.+.|+++.++++.+++..
T Consensus 328 v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~~i~ 378 (385)
T 3nvt_A 328 LLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASN 378 (385)
T ss_dssp HHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHHHHH
Confidence 77889999999999 44 4589999999999999999999754
No 264
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=86.90 E-value=7.4 Score=38.20 Aligned_cols=93 Identities=18% Similarity=0.139 Sum_probs=61.4
Q ss_pred HHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC--CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEE
Q 013498 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG--ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIS 285 (442)
Q Consensus 208 ~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G--ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~ 285 (442)
+.++.+++.|+. +.+.. + .+++.+ +.++.+.+.| ++.|.+ |+ +...|....+.|+.+++.+++ .++.
T Consensus 85 ~~i~~~~~~g~~-v~v~~---g-~~~~~~-~~a~~~~~~g~~~~~i~i-~~-~~G~~~~~~~~i~~lr~~~~~---~~vi 153 (336)
T 1ypf_A 85 SFIRDMQSRGLI-ASISV---G-VKEDEY-EFVQQLAAEHLTPEYITI-DI-AHGHSNAVINMIQHIKKHLPE---SFVI 153 (336)
T ss_dssp HHHHHHHHTTCC-CEEEE---C-CSHHHH-HHHHHHHHTTCCCSEEEE-EC-SSCCSHHHHHHHHHHHHHCTT---SEEE
T ss_pred HHHHHHHhcCCe-EEEeC---C-CCHHHH-HHHHHHHhcCCCCCEEEE-EC-CCCCcHHHHHHHHHHHHhCCC---CEEE
Confidence 345566667763 43332 1 123433 5678888999 888766 32 123788889999999999874 2333
Q ss_pred EeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 286 THCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 286 ~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
.. ..+....+..|+++||+.|.++-.
T Consensus 154 -~G---~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 154 -AG---NVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp -EE---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred -EC---CcCCHHHHHHHHHcCCCEEEEecC
Confidence 21 234567889999999999998643
No 265
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=86.90 E-value=7.8 Score=35.79 Aligned_cols=189 Identities=18% Similarity=0.139 Sum_probs=98.5
Q ss_pred EEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee--cc
Q 013498 82 VFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL--SR 159 (442)
Q Consensus 82 I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~--~r 159 (442)
.+|-|+ - +-..|.++..++.+...+.|+..+-+ +|.. ++...+.+. .+ .+..+.++ +.
T Consensus 7 ~iDht~-l-----~p~~t~~~i~~l~~~a~~~g~~~v~v-~~~~-------v~~~~~~l~-~v-----~v~~v~~~P~g~ 66 (225)
T 1mzh_A 7 YIDNAA-L-----KPHLSEKEIEEFVLKSEELGIYAVCV-NPYH-------VKLASSIAK-KV-----KVCCVIGFPLGL 66 (225)
T ss_dssp GEEEEE-C-----CTTCCHHHHHHHHHHHHHTTCSEEEE-CGGG-------HHHHHHHCS-SS-----EEEEEESTTTCC
T ss_pred hccccc-c-----CCCCCHHHHHHHHHHHHHhCCeEEEE-CHHH-------HHHHHHHhc-CC-----ceeeEecCCCCc
Confidence 456666 1 23478999999999999999998875 4432 222222211 10 01111111 11
Q ss_pred c-chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHH
Q 013498 160 C-NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 238 (442)
Q Consensus 160 ~-~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~ 238 (442)
. ....+..+-++ ...|.+.|.+.+..+-. + .-..+.+.+.+....+.+. +. .|.+-.|. ...+.+.+.+
T Consensus 67 ~~~~~k~~~~~~A-~~~Gad~Id~viN~g~~----~-~~~~~~~~~~i~~v~~a~~--pv-~vKvi~e~-~~l~~~~~~~ 136 (225)
T 1mzh_A 67 NKTSVKVKEAVEA-VRDGAQELDIVWNLSAF----K-SEKYDFVVEELKEIFRETP--SA-VHKVIVET-PYLNEEEIKK 136 (225)
T ss_dssp SCHHHHHHHHHHH-HHTTCSEEEEECCHHHH----H-TTCHHHHHHHHHHHHHTCT--TS-EEEEECCG-GGCCHHHHHH
T ss_pred cchhhhHHHHHHH-HHcCCCEEEEEecHHHH----h-cCChHHHHHHHHHHHHHhc--Cc-eEEEEEeC-CCCCHHHHHH
Confidence 1 11122222222 23589999876665531 1 1234444444333322222 33 35553332 2356678999
Q ss_pred HHHHHHHcCCcEEeccCc---ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 239 ILGEVIKVGATTLNIPDT---VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 239 ~~~~~~~~Gad~I~laDT---~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+++.+.++|+|.|. ..| .|-.+++.++. +++.+++ +++|-.=.=-.. ...+++.+++||+.|
T Consensus 137 ~a~~a~eaGad~I~-tstg~~~gga~~~~i~~----v~~~v~~--~ipVia~GGI~t---~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 137 AVEICIEAGADFIK-TSTGFAPRGTTLEEVRL----IKSSAKG--RIKVKASGGIRD---LETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHTCSEEE-CCCSCSSSCCCHHHHHH----HHHHHTT--SSEEEEESSCCS---HHHHHHHHHTTCSEE
T ss_pred HHHHHHHhCCCEEE-ECCCCCCCCCCHHHHHH----HHHHhCC--CCcEEEECCCCC---HHHHHHHHHhCchHH
Confidence 99999999999993 333 23345554444 4444321 244433321111 467788888999976
No 266
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=86.82 E-value=21 Score=36.65 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=88.2
Q ss_pred CCEEEEccCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHH
Q 013498 115 VDIIEAGFPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEH 193 (442)
Q Consensus 115 V~~IEvG~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~ 193 (442)
+|.|-+++-...++.+ ..++.+.+.. -+|.+. . .+.+-++.+++.... +.+.|. +++.
T Consensus 128 aD~I~l~~~~~dpe~~~~~Vk~V~e~~---------dvPlsI-D--~dp~vleaale~~~d-~~pLIn---s~t~----- 186 (445)
T 2h9a_A 128 VNLVALKGSSQDAATFAKAVATAREVT---------DLPFIL-I--GTPEQLAAALETEGA-NNPLLY---AATA----- 186 (445)
T ss_dssp CCEEEEECTTCCHHHHHHHHHHHHHHC---------CSCEEE-E--SCHHHHHHHHHHHGG-GCCEEE---EECT-----
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHhc---------CCCEEE-E--CCHHHHHHHHHhcCC-CCCEEE---ECCH-----
Confidence 9999999844444443 2344444431 124222 2 688888888887432 222332 3332
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHH
Q 013498 194 KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIK 273 (442)
Q Consensus 194 ~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~ 273 (442)
+++.++...+++.|.. |....+ +.+.+.++.+.+.++|.+.|.| |..... -....+-+..+|
T Consensus 187 ----------en~~~~~~la~~y~~~-vV~~~~-----~l~~l~~lv~~a~~~Gi~~IiL-DP~~~~-~~~sl~~~~~IR 248 (445)
T 2h9a_A 187 ----------DNYEQMVELAKKYNVP-LTVSAK-----GLDALAELVQKITALGYKNLIL-DPQPEN-ISEGLFYQTQIR 248 (445)
T ss_dssp ----------TTHHHHHHHHHHHTCC-EEEECS-----SHHHHHHHHHHHHHTTCCCEEE-ECCCSS-HHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHhCCe-EEEEcC-----CHHHHHHHHHHHHHCCCCcEEE-cCCchh-HHHHHHHHHHHH
Confidence 1334667778888886 444332 6889999999999999987775 654322 333444555555
Q ss_pred HhC---CCCc-ce-eEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 274 ANT---PGIE-NV-VISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 274 ~~~---p~~~-~v-~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+.. ++.. .. .+..-+.-|--+...-|..+++.||+.+
T Consensus 249 ~~al~~~d~~lg~P~i~~vs~~d~~~ea~lA~~~~~~GasIl 290 (445)
T 2h9a_A 249 RLAIKKLFRPFGYPTIAFALDENPYQAVMEASVYIAKYAGII 290 (445)
T ss_dssp HHHHHSCCGGGCSCBEEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HhhhcCCCcccCCCeeecCCchhHHHHHHHHHHHHHcCCeEE
Confidence 431 1100 01 2333333222255555555678888886
No 267
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=86.80 E-value=11 Score=39.81 Aligned_cols=154 Identities=12% Similarity=0.101 Sum_probs=90.2
Q ss_pred EeCC----CCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCC----hhHHH-HHHHHHHHhcccccccCCccce
Q 013498 83 FDTT----LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAAS----KEDFE-AVRTIAKEVGNAVDAESGYVPV 153 (442)
Q Consensus 83 ~DtT----LRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~----~~d~e-~v~~l~~~~~~~~~~~~~l~~~ 153 (442)
+.+| ++||.+. .+.+..++.++.+.+.|-++|.+| |+.. +++++ .++.+.+.. . +|
T Consensus 322 ~N~Tg~dsf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~--------~-vp- 386 (566)
T 1q7z_A 322 INPAGRKKLWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVS--------N-VP- 386 (566)
T ss_dssp ECCTTCHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHT--------C-SC-
T ss_pred ecCCCChhHHHHhhc----CCHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhC--------C-ce-
Confidence 5567 6666543 467999999999999999999999 5432 23332 334443321 1 22
Q ss_pred EeeecccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC--CCC
Q 013498 154 ICGLSRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA--GRS 231 (442)
Q Consensus 154 i~~~~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda--sr~ 231 (442)
++.-+ .+.+-++.++++.. |.+.|+ ++|- . + +++.++++.+++.|.. |.....+. .++
T Consensus 387 isIDT-~~~~v~eaal~~~~--G~~iIN---dis~--------~---~--~~~~~~~~~~~~~g~~-vV~m~~~~~~p~t 446 (566)
T 1q7z_A 387 LSLDI-QNVDLTERALRAYP--GRSLFN---SAKV--------D---E--EELEMKINLLKKYGGT-LIVLLMGKDVPKS 446 (566)
T ss_dssp EEEEC-CCHHHHHHHHHHCS--SCCEEE---EEES--------C---H--HHHHHHHHHHHHHCCE-EEEESCSSSCCCS
T ss_pred EEEeC-CCHHHHHHHHHhcC--CCCEEE---ECCc--------c---h--hhHHHHHHHHHHhCCe-EEEEeCCCCCcCC
Confidence 22222 36667777777632 666554 3321 0 1 3345677778889985 55544342 111
Q ss_pred -C--HHHHHHHHHHHHHcCC-cEEec---cCcccccCHHHHHHHHHHHH
Q 013498 232 -D--RKFLYEILGEVIKVGA-TTLNI---PDTVGITMPTEFGKLIADIK 273 (442)
Q Consensus 232 -d--~~~l~~~~~~~~~~Ga-d~I~l---aDT~G~~~P~~v~~li~~l~ 273 (442)
+ .+++.+.++.+.++|+ +.|.| .+++|... +-.++++.++
T Consensus 447 ~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk--~~~~~l~~~~ 493 (566)
T 1q7z_A 447 FEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEG--KPVEVLKTIE 493 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTC--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcH--HHHHHHHHHH
Confidence 1 4678888888999999 45543 24446666 4444444443
No 268
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=86.78 E-value=9.3 Score=38.17 Aligned_cols=140 Identities=14% Similarity=0.042 Sum_probs=80.4
Q ss_pred hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-----CCC-eEEEccCCCCCCCHHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-----GCD-DVEFSPEDAGRSDRKF 235 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-----G~~-~V~f~~edasr~d~~~ 235 (442)
.+|...+++.+.. ..+.|.+-+++....-. .+-.+ .+.+..+.+.++.+++. ... .|-+.+ ..+.+.
T Consensus 163 ~~dy~~~~~~~~~-~ad~ielNisCPn~~G~-~~l~~-~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p----~~~~~~ 235 (367)
T 3zwt_A 163 AEDYAEGVRVLGP-LADYLVVNVSSPNTAGL-RSLQG-KAELRRLLTKVLQERDGLRRVHRPAVLVKIAP----DLTSQD 235 (367)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTG-GGGGS-HHHHHHHHHHHHHHHHTSCGGGCCEEEEEECS----CCCHHH
T ss_pred HHHHHHHHHHHhh-hCCEEEEECCCCCCCCc-cccCC-HHHHHHHHHHHHHHHhhccccCCceEEEEeCC----CCCHHH
Confidence 3555555555432 46777665554321100 01112 34455555555555432 232 133333 245678
Q ss_pred HHHHHHHHHHcCCcEEeccCcc-c--------------cc----CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 236 LYEILGEVIKVGATTLNIPDTV-G--------------IT----MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~-G--------------~~----~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
+.++++.+.++|+|.|.+..|+ + .+ .+....++|+.+++.+++ +++|..=.-=.. .
T Consensus 236 ~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~--~ipvI~~GGI~s---~ 310 (367)
T 3zwt_A 236 KEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG--RVPIIGVGGVSS---G 310 (367)
T ss_dssp HHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT--CSCEEEESSCCS---H
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC--CceEEEECCCCC---H
Confidence 9999999999999999988775 1 11 123345889999998863 355543322111 3
Q ss_pred HHHHHHHHhCCCEEEec
Q 013498 297 ANTIAGACAGARQVEVT 313 (442)
Q Consensus 297 ANalaAl~aGa~~vd~T 313 (442)
..+++++++||+.|...
T Consensus 311 ~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 311 QDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 56778888999988653
No 269
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=86.65 E-value=22 Score=33.63 Aligned_cols=227 Identities=16% Similarity=0.164 Sum_probs=132.2
Q ss_pred CCCceEEEeCCCCcCCCCCCC---CCCHHHHHHHHHHHhHcCCCEEEEc--cCCCChhHHH----HHHHHHHHhcccccc
Q 013498 76 DPNYVRVFDTTLRDGEQSPGA---TLTSKEKLDIARQLAKLGVDIIEAG--FPAASKEDFE----AVRTIAKEVGNAVDA 146 (442)
Q Consensus 76 ~~~~V~I~DtTLRDG~Q~~g~---~fs~e~kl~ia~~L~~~GV~~IEvG--~p~~~~~d~e----~v~~l~~~~~~~~~~ 146 (442)
+.+.|+|-+.|+=+|.----+ .=+.++.++-++.+...|+|.||+= +.. ...+.+ .+..+.+..+.
T Consensus 4 m~~~v~v~~~~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~-~~~~~~~v~~~l~~lr~~~~~---- 78 (258)
T 4h3d_A 4 MKRKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFE-NVENIKEVKEVLYELRSYIHD---- 78 (258)
T ss_dssp CCCCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCT-TTTCHHHHHHHHHHHHHHCTT----
T ss_pred CcceEEEcCEEeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecccc-ccCCHHHHHHHHHHHHHhcCC----
Confidence 456688888888777531112 2367888888888899999999993 221 112223 34444443211
Q ss_pred cCCccceEeeecccchh---------hHHHHHHHHHhCC-CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc
Q 013498 147 ESGYVPVICGLSRCNER---------DIKTAWEAVKYAK-RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL 216 (442)
Q Consensus 147 ~~~l~~~i~~~~r~~~~---------dI~~a~e~l~~~g-~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~ 216 (442)
.|.|.. .|...+ +-...++.+...+ ++.|-+-....+ +...+.++.+++.
T Consensus 79 ----lPiI~T-~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------------~~~~~l~~~a~~~ 138 (258)
T 4h3d_A 79 ----IPLLFT-FRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD---------------EVIDEVVNFAHKK 138 (258)
T ss_dssp ----SCEEEE-CCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCH---------------HHHHHHHHHHHHT
T ss_pred ----CCEEEE-EechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccH---------------HHHHHHHHHHHhC
Confidence 244443 354332 1111222222234 677777654432 2344677888888
Q ss_pred CCCeEEEccCCCCCC-CHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHH---HhCCCCcceeEEEeecCCc
Q 013498 217 GCDDVEFSPEDAGRS-DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIK---ANTPGIENVVISTHCQNDL 292 (442)
Q Consensus 217 G~~~V~f~~edasr~-d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~---~~~p~~~~v~i~~H~HNDl 292 (442)
|.+ |..+.=|...+ +.+.+.+.++.+.+.|+|.+-|+=+. -.+.++.+++.... +..++ .|+-.-+=-..
T Consensus 139 ~~k-iI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~~---~P~I~~~MG~~ 212 (258)
T 4h3d_A 139 EVK-VIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYAD---RPIITMSMSGM 212 (258)
T ss_dssp TCE-EEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCS---SCBEEEECTGG
T ss_pred CCE-EEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcCC---CCEEEEeCCCC
Confidence 874 65554333333 45788899999999999999997544 35677777776543 33443 34443332233
Q ss_pred chHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhc
Q 013498 293 GLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 293 GLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~ 336 (442)
|. -.=+.+-..|-....+++ |-....|..+++++-..|+..
T Consensus 213 G~--~SRi~~~~fGS~lTf~~~-~~~sAPGQl~~~el~~~l~lL 253 (258)
T 4h3d_A 213 GV--ISRLCGEIFGSALTFGAA-KSVSAPGQISFKELNSVLNLL 253 (258)
T ss_dssp GG--GGGTCHHHHCBCEEECBC-C---CTTCCBHHHHHHHHHHH
T ss_pred Ch--HHHHHHHHhCCceEeccC-CCCCCCCCCCHHHHHHHHHHH
Confidence 32 233444556777777765 334577999999988777754
No 270
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=86.57 E-value=6.9 Score=38.58 Aligned_cols=41 Identities=12% Similarity=0.020 Sum_probs=20.4
Q ss_pred EEEee-cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 013498 180 IHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (442)
Q Consensus 180 v~i~~-~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~ 224 (442)
|.++. ..-|-+......++.++.++. ++..-+.|+..++++
T Consensus 9 v~i~DttlRDG~Q~~~~~~~~e~k~~i----~~~L~~~Gvd~IEvG 50 (345)
T 1nvm_A 9 LYISDVTLRDGSHAIRHQYTLDDVRAI----ARALDKAKVDSIEVA 50 (345)
T ss_dssp CEEEECTTTHHHHHTTTCCCHHHHHHH----HHHHHHHTCSEEECS
T ss_pred cEEEECCCCcccCCCCCCCCHHHHHHH----HHHHHHcCCCEEEEe
Confidence 44443 233444433445566655543 333344677667764
No 271
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=86.55 E-value=2 Score=43.14 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCcEEeccCc-ccccCHHHHHHHHHHHHHhCCCCcceeEEE-eecCCcchHHHHHHHHHHhCCCEEE
Q 013498 234 KFLYEILGEVIKVGATTLNIPDT-VGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~laDT-~G~~~P~~v~~li~~l~~~~p~~~~v~i~~-H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
+...+.++.+.++|+|.|.+ |+ .| .+..+.+.|+.+++.+|+ ++|.. -. .....+..++++|||.|.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~i-d~a~G--~~~~~~e~I~~ir~~~~~---~~Vi~G~V-----~T~e~A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCV-DVAHA--HAKYVGKTLKSLRQLLGS---RCIMAGNV-----ATYAGADYLASCGADIIK 167 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ECSCC--SSHHHHHHHHHHHHHHTT---CEEEEEEE-----CSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE-eCCCC--CcHhHHHHHHHHHHhcCC---CeEEEcCc-----CCHHHHHHHHHcCCCEEE
Confidence 45678899999999997766 43 34 356778899999998875 44443 12 235678899999999999
Q ss_pred eccc
Q 013498 312 VTIN 315 (442)
Q Consensus 312 ~Tv~ 315 (442)
+++.
T Consensus 168 Vg~g 171 (361)
T 3r2g_A 168 AGIG 171 (361)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 8644
No 272
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=86.52 E-value=22 Score=33.65 Aligned_cols=164 Identities=16% Similarity=0.191 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
..+.+..++.++.+.+.|-++|.+|......++.|.++++...+.... . +| |+.=+ .+.+-++.|+++. .|
T Consensus 21 ~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~----~-~p-isIDT-~~~~v~~aAl~a~--~G 91 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS----N-LT-LCLDS-TNIKAIEAGLKKC--KN 91 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC----C-SE-EEEEC-SCHHHHHHHHHHC--SS
T ss_pred cCCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC----C-Ce-EEEeC-CCHHHHHHHHhhC--CC
Confidence 367899999999999999999999963222223334444433322110 1 12 32222 3566667777752 26
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCC----CHHHHHHHHHHHHHcCCc-
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRS----DRKFLYEILGEVIKVGAT- 249 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~----d~~~l~~~~~~~~~~Gad- 249 (442)
.+.|+ ++|- . + +...++++.+++.|.. +.....+ .... ..+++.+.++.+.++|++
T Consensus 92 a~iIN---dvs~--------~--~---d~~~~~~~~~a~~~~~-vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~ 154 (262)
T 1f6y_A 92 RAMIN---STNA--------E--R---EKVEKLFPLAVEHGAA-LIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPM 154 (262)
T ss_dssp CEEEE---EECS--------C--H---HHHHHHHHHHHHTTCE-EEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCG
T ss_pred CCEEE---ECCC--------C--c---ccHHHHHHHHHHhCCc-EEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCc
Confidence 55554 3331 1 1 3344567778889985 5544432 1111 146778888889999985
Q ss_pred -EEeccCc----ccccC--HHHHHHHHHHHHHhC-CCCcceeEEEeecC
Q 013498 250 -TLNIPDT----VGITM--PTEFGKLIADIKANT-PGIENVVISTHCQN 290 (442)
Q Consensus 250 -~I~laDT----~G~~~--P~~v~~li~~l~~~~-p~~~~v~i~~H~HN 290 (442)
.|.| |. +|... -.++-+.++.+++.+ |+ .|+.+=.+|
T Consensus 155 ~~Iil-DPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg---~pvl~G~Sr 199 (262)
T 1f6y_A 155 EDLYI-DPLILPANVAQDHAPEVLKTLQQIKMLADPA---PKTVLGLSN 199 (262)
T ss_dssp GGEEE-ECCCCCTTTCTTHHHHHHHHHHHHHTCCSSC---CEEEEEGGG
T ss_pred ccEEE-eCCCCcCCCChHHHHHHHHHHHHHHHHhCCC---CCEEEeecC
Confidence 4544 33 23222 234455556666655 44 455554444
No 273
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=86.50 E-value=4.9 Score=37.06 Aligned_cols=106 Identities=11% Similarity=0.046 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHH
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGE 242 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~ 242 (442)
.+++.+++.++.+|.+.|.++.. |. ....+. +.+.++.+.+++.|++.+.+++.. ....+.+.+.++.
T Consensus 30 ~~~~~~l~~~~~~G~~~vEl~~~----~~--~~~~~~----~~~~~~~~~l~~~gl~i~~~~~~~--~~~~~~~~~~i~~ 97 (257)
T 3lmz_A 30 FDLDTTLKTLERLDIHYLCIKDF----HL--PLNSTD----EQIRAFHDKCAAHKVTGYAVGPIY--MKSEEEIDRAFDY 97 (257)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTT----TS--CTTCCH----HHHHHHHHHHHHTTCEEEEEEEEE--ECSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEecc----cC--CCCCCH----HHHHHHHHHHHHcCCeEEEEeccc--cCCHHHHHHHHHH
Confidence 46777888888899999998753 11 122333 234566677888998633343321 1567899999999
Q ss_pred HHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 013498 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 290 (442)
Q Consensus 243 ~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HN 290 (442)
+.+.|++.|.+. .| .+.+.++.....+. ++.|.+|.|+
T Consensus 98 A~~lGa~~v~~~--p~---~~~l~~l~~~a~~~-----gv~l~lEn~~ 135 (257)
T 3lmz_A 98 AKRVGVKLIVGV--PN---YELLPYVDKKVKEY-----DFHYAIHLHG 135 (257)
T ss_dssp HHHHTCSEEEEE--EC---GGGHHHHHHHHHHH-----TCEEEEECCC
T ss_pred HHHhCCCEEEec--CC---HHHHHHHHHHHHHc-----CCEEEEecCC
Confidence 999999998873 22 34556666655543 3779999986
No 274
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=86.46 E-value=2.2 Score=40.10 Aligned_cols=191 Identities=18% Similarity=0.218 Sum_probs=100.8
Q ss_pred HHHHHHHHhHcCCCEEEE----ccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 103 KLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEv----G~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
=+++++...+.|++.+-+ |.....+...+.++.+++... .|.-.|=+--+.++++..+++ |++
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~---------~pl~vGGGIrs~e~~~~~l~~----Gad 99 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVS---------VNLQVGGGIRSKEEVKALLDC----GVK 99 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCC---------SEEEEESSCCCHHHHHHHHHT----TCS
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhcC---------CCeEeccccccHHHHHHHHHc----CCC
Confidence 466788899999997765 222222345678888887642 233333333367888877765 899
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC-----------CCCC-CCHHHHHHHHHHHHHc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-----------DAGR-SDRKFLYEILGEVIKV 246 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-----------dasr-~d~~~l~~~~~~~~~~ 246 (442)
+|.+-...- .++ +.+. + .++..|-..+.++.. +..+ ...-.+.+.++.+.+.
T Consensus 100 kVii~t~a~---------~~p-~li~---e---~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~ 163 (243)
T 4gj1_A 100 RVVIGSMAI---------KDA-TLCL---E---ILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNK 163 (243)
T ss_dssp EEEECTTTT---------TCH-HHHH---H---HHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTT
T ss_pred EEEEccccc---------cCC-chHH---H---HHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhc
Confidence 987642221 111 1121 2 234445432222210 0000 1112356788888999
Q ss_pred CCcEEecc--CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcc
Q 013498 247 GATTLNIP--DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (442)
Q Consensus 247 Gad~I~la--DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa 324 (442)
|+..|.+- |..|.+.-..+ ++++.+.+.+++ +|+-... |.+...=+..+..+++ +.+.|--=-.|..
T Consensus 164 g~~eil~t~Id~DGt~~G~d~-~l~~~l~~~~~~---ipviasG----Gv~~~~Dl~~l~~~~~---gvivg~Al~~g~i 232 (243)
T 4gj1_A 164 GLKHILCTDISKDGTMQGVNV-RLYKLIHEIFPN---ICIQASG----GVASLKDLENLKGICS---GVIVGKALLDGVF 232 (243)
T ss_dssp TCCEEEEEETTC-----CCCH-HHHHHHHHHCTT---SEEEEES----CCCSHHHHHHTTTTCS---EEEECHHHHTTSS
T ss_pred CCcEEEeeeecccccccCCCH-HHHHHHHHhcCC---CCEEEEc----CCCCHHHHHHHHccCc---hhehHHHHHCCCC
Confidence 99988875 66788887666 477888887764 5565432 2222333444555433 3343322234666
Q ss_pred cHHHHHHHH
Q 013498 325 SLEEVVMAF 333 (442)
Q Consensus 325 ~lEevv~~L 333 (442)
+++|++..|
T Consensus 233 ~l~ea~~~l 241 (243)
T 4gj1_A 233 SVEEGIRCL 241 (243)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 666665544
No 275
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.36 E-value=7 Score=38.16 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v 265 (442)
.|.++.+..+....+-+. ... |...++.. .-+++.+.+.++.+.++|+..|.|-|.++ ....+++
T Consensus 62 vt~~em~~~~~~I~~~~~--~~P-viaD~d~G-yg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~ 137 (302)
T 3fa4_A 62 CTLNDMRANAEMISNISP--STP-VIADADTG-YGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTY 137 (302)
T ss_dssp CCHHHHHHHHHHHHTTST--TSC-EEEECTTT-TSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHH
T ss_pred CCHHHHHHHHHHHHhhcc--CCC-EEEECCCC-CCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHH
Confidence 467777766554433211 344 77777654 45788899999999999999999999985 3455677
Q ss_pred HHHHHHHHHhCC--CCcceeEEEeec----CCcchHHHHHHHHHHhCCCEE
Q 013498 266 GKLIADIKANTP--GIENVVISTHCQ----NDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 266 ~~li~~l~~~~p--~~~~v~i~~H~H----NDlGLA~ANalaAl~aGa~~v 310 (442)
.+.|+..++.-. +. +..|-.-+- .++--|+.-+.+..+||||.|
T Consensus 138 ~~rI~Aa~~A~~~~~~-d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 138 VTRIRAAVQARQRIGS-DIVVIARTDSLQTHGYEESVARLRAARDAGADVG 187 (302)
T ss_dssp HHHHHHHHHHHHHHTC-CCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHHHHHHHhcCC-CEEEEEEecccccCCHHHHHHHHHHHHHcCCCEE
Confidence 777777665320 11 233433332 233346777788899999997
No 276
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=86.34 E-value=4.6 Score=40.23 Aligned_cols=99 Identities=13% Similarity=0.194 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~ 175 (442)
.++.++-+++++.|.+.|++.||-.+| +++++..+.+.+... +|.+ +=.+ .+.++++..++. .
T Consensus 200 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iPI~-~de~i~~~~~~~~~i~~---~ 263 (384)
T 2pgw_A 200 GWSVHDAINMCRKLEKYDIEFIEQPTV---SWSIPAMAHVREKVG---------IPIV-ADQAAFTLYDVYEICRQ---R 263 (384)
T ss_dssp CCCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHCS---------SCEE-ESTTCCSHHHHHHHHHT---T
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCC---------CCEE-EeCCcCCHHHHHHHHHc---C
Confidence 468899999999999999999996543 567888888877531 2433 2222 245666666553 3
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+=. + +. .-+..+.+++++|++.|+. +.++.
T Consensus 264 ~~d~v~ik~--~------~~-----GGit~~~~i~~~A~~~g~~-~~~~~ 299 (384)
T 2pgw_A 264 AADMICIGP--R------EI-----GGIQPMMKAAAVAEAAGLK-ICIHS 299 (384)
T ss_dssp CCSEEEECH--H------HH-----TSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCCEEEEcc--h------hh-----CCHHHHHHHHHHHHHCCCe-Eeecc
Confidence 466665411 1 11 1256677899999999996 77765
No 277
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=86.33 E-value=5.9 Score=36.33 Aligned_cols=72 Identities=13% Similarity=0.196 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCcEEeccCcccccCH--HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 238 EILGEVIKVGATTLNIPDTVGITMP--TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT~G~~~P--~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
+.++.+.++|+|.|.+-=. -...| ..+.++++.+++.+|+ .++.+-+|+ ...+..++++|+++|..++.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~-~~~~~~~~~~~~~i~~i~~~~~~---~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~ 162 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCT-KRDRHDGLDIASFIRQVKEKYPN---QLLMADIST-----FDEGLVAHQAGIDFVGTTLS 162 (234)
T ss_dssp HHHHHHHTTTCSEEEEECC-SSCCTTCCCHHHHHHHHHHHCTT---CEEEEECSS-----HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEEccc-ccCCCCCccHHHHHHHHHHhCCC---CeEEEeCCC-----HHHHHHHHHcCCCEEeeecc
Confidence 3466778899998866322 11223 2457889999988864 556666664 34478899999999976777
Q ss_pred ccc
Q 013498 316 GIG 318 (442)
Q Consensus 316 GlG 318 (442)
|+.
T Consensus 163 g~~ 165 (234)
T 1yxy_A 163 GYT 165 (234)
T ss_dssp TSS
T ss_pred ccC
Confidence 753
No 278
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=86.32 E-value=2.8 Score=39.31 Aligned_cols=210 Identities=13% Similarity=0.074 Sum_probs=105.9
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc--------cchhhHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--------CNERDIKT 167 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r--------~~~~dI~~ 167 (442)
..++.++.++. +.++|++.||+..+. + +.+.++.+.+..+-.+ ..+ .+.. ...+.+++
T Consensus 29 ~~~~~~~~l~~---~~~~G~~~vEl~~~~--~-~~~~~~~~l~~~gl~~-------~~~-~~~~~~~~~~~~~~~~~~~~ 94 (301)
T 3cny_A 29 KDNNLQQLLSD---IVVAGFQGTEVGGFF--P-GPEKLNYELKLRNLEI-------AGQ-WFSSYIIRDGIEKASEAFEK 94 (301)
T ss_dssp TTCCHHHHHHH---HHHHTCCEECCCTTC--C-CHHHHHHHHHHTTCEE-------CEE-EEEECHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHH---HHHhCCCEEEecCCC--C-CHHHHHHHHHHCCCeE-------EEE-eccCCCChhhHHHHHHHHHH
Confidence 34677766554 556799999997432 3 5556666555432211 111 1110 01234566
Q ss_pred HHHHHHhCCCCEEEEeec------CC-h-HHHHHH--hCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC-CCCCCHHHH
Q 013498 168 AWEAVKYAKRPRIHTFIA------TS-G-IHMEHK--LRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AGRSDRKFL 236 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~------~S-d-~h~~~~--l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed-asr~d~~~l 236 (442)
+++.....|.+.|.+... .. + ...... .....+...+.+.+++++|++.|+. +.+-... ..-.+++.+
T Consensus 95 ~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-l~lE~~~~~~~~~~~~~ 173 (301)
T 3cny_A 95 HCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLK-VAYHHHMGTGIQTKEET 173 (301)
T ss_dssp HHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSSSCSHHHH
T ss_pred HHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCE-EEEecCCCcccCCHHHH
Confidence 677777789998876531 00 0 000000 0002345667778888999999974 6553321 122456666
Q ss_pred HHHHHHHHHcCCcEEecc-CcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH-------HHHhCC
Q 013498 237 YEILGEVIKVGATTLNIP-DTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA-------GACAGA 307 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~la-DT~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANala-------Al~aGa 307 (442)
.++++. .+.+.+.++ ||.=...- ....+.++.+.. -...+|.||..+-...+... +...+
T Consensus 174 ~~l~~~---~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~-------~i~~vHl~D~~~~~~~~~~~~~~~~~~~~~~~- 242 (301)
T 3cny_A 174 DRLMAN---TDPKLVGLLYDTGHIAVSDGDYMALLNAHID-------RVVHVHFKDVRRSKEEECRAKGLTFQGSFLNG- 242 (301)
T ss_dssp HHHHHT---SCTTTCEEEEEHHHHHHHHSCSHHHHHHHGG-------GEEEEEECEECHHHHHHHHHHTCCHHHHHHTT-
T ss_pred HHHHHh---CCccceeEEechHHHHHcCCCHHHHHHHHHh-------heeEEEeecCCcchhhhhhhcccchhhHhhcC-
Confidence 665544 343323222 55321111 011233333322 34789999876542211100 01111
Q ss_pred CEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 308 RQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 308 ~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
. ..-+|+ |..+.++++..|+..|.
T Consensus 243 ~-----~~~~G~--G~id~~~i~~~L~~~gy 266 (301)
T 3cny_A 243 M-----FTVPGD--GDLDFKPVYDKLIANNY 266 (301)
T ss_dssp C-----EECTTT--SSCCCHHHHHHHHHTTC
T ss_pred c-----cccCCC--CCccHHHHHHHHHhcCC
Confidence 1 123444 88999999999998764
No 279
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.30 E-value=24 Score=33.78 Aligned_cols=192 Identities=15% Similarity=0.094 Sum_probs=116.6
Q ss_pred CCCHHHHHHHHHHHhH-cCCCEEEE-c----cCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhh-HHHH
Q 013498 97 TLTSKEKLDIARQLAK-LGVDIIEA-G----FPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTA 168 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~-~GV~~IEv-G----~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a 168 (442)
.+..+.-.++++.|.+ .|++-|-+ | ++..+.+|. +.++...+... +.+|.|++.+..+.++ |+.+
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-------grvpviaGvg~~~t~~ai~la 92 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-------DQIALIAQVGSVNLKEAVELG 92 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-------TSSEEEEECCCSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-------CCCeEEEecCCCCHHHHHHHH
Confidence 3788888899999999 99998876 4 465666665 45566555542 3357888877655444 4444
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCHHHHHHHHHHHHHc
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~~~l~~~~~~~~~~ 246 (442)
-. ...+|++.+-+..|-. ++.+.++.++-....++. .++.-+-++.+. ....+++.+.+++ +
T Consensus 93 ~~-a~~~Gadavlv~~P~y-------~~~~~~~l~~~f~~va~a---~~lPiilYn~P~~tg~~l~~~~~~~La----~- 156 (293)
T 1f6k_A 93 KY-ATELGYDCLSAVTPFY-------YKFSFPEIKHYYDTIIAE---TGSNMIVYSIPFLTGVNMGIEQFGELY----K- 156 (293)
T ss_dssp HH-HHHHTCSEEEEECCCS-------SCCCHHHHHHHHHHHHHH---HCCCEEEEECHHHHCCCCCHHHHHHHH----T-
T ss_pred HH-HHhcCCCEEEECCCCC-------CCCCHHHHHHHHHHHHHh---CCCCEEEEECccccCcCCCHHHHHHHh----c-
Confidence 33 3456999887765532 244666666665555443 244534555432 3346777777665 2
Q ss_pred CCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcccH
Q 013498 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASL 326 (442)
Q Consensus 247 Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~l 326 (442)
-...+.+.||.|- ..++.++++. .++ .. -+-.+++ ..+.++..|++.+ +.| .+|...
T Consensus 157 ~pnIvgiK~s~gd--~~~~~~~~~~----~~~---f~-v~~G~d~------~~~~~l~~G~~G~---is~----~~n~~P 213 (293)
T 1f6k_A 157 NPKVLGVKFTAGD--FYLLERLKKA----YPN---HL-IWAGFDE------MMLPAASLGVDGA---IGS----TFNVNG 213 (293)
T ss_dssp STTEEEEEECSCC--HHHHHHHHHH----CTT---SE-EEECCGG------GHHHHHHTTCSEE---EES----THHHHH
T ss_pred CCCEEEEEECCCC--HHHHHHHHHh----CCC---eE-EEECcHH------HHHHHHHCCCcEE---EeC----HHHhhH
Confidence 2678999999885 3556555542 332 11 2223333 2566778898754 222 356666
Q ss_pred HHHHHHHH
Q 013498 327 EEVVMAFK 334 (442)
Q Consensus 327 Eevv~~L~ 334 (442)
+.++...+
T Consensus 214 ~~~~~l~~ 221 (293)
T 1f6k_A 214 VRARQIFE 221 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665544
No 280
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=86.22 E-value=5.4 Score=38.45 Aligned_cols=123 Identities=14% Similarity=0.037 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhC---CCHHHHHH
Q 013498 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLR---KTKQQVVE 204 (442)
Q Consensus 129 d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~---~s~~e~l~ 204 (442)
..+.++++++. + .|++.--+. .+.+++..|++.+...|-+.+++.-..+.. .+. .+ +
T Consensus 118 n~~ll~~~a~~-~---------kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~----~~~~~~~d----l- 178 (280)
T 2qkf_A 118 QTDLVVAMAKT-G---------NVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF----GYDNLVVD----M- 178 (280)
T ss_dssp BHHHHHHHHHT-C---------CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC----STTCEECC----T-
T ss_pred CHHHHHHHHcC-C---------CcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCccccC----H-
Confidence 35577777542 1 244444444 377899999998888898877776554421 111 11 1
Q ss_pred HHHHHHHHHHHc--CCCeEEEccCCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ccCcccccCH
Q 013498 205 IARSMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMP 262 (442)
Q Consensus 205 ~~~~~v~~ar~~--G~~~V~f~~eda----------sr~d~~~l~~~~~~~~~~Gad~I~----------laDT~G~~~P 262 (442)
..+...|+. |+. |.|.+--+ +.-..+++..++.++...|++.+. ++|-.=.+.|
T Consensus 179 ---~~i~~lk~~~~~~p-V~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~~d~al~D~~~sl~p 254 (280)
T 2qkf_A 179 ---LGFGVMKQTCGNLP-VIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPL 254 (280)
T ss_dssp ---THHHHHHHHTTTCC-EEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC----------------C
T ss_pred ---HHHHHHHHhCCCCC-EEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCCcccCCCccccCCCH
Confidence 123334555 675 77743111 133567888899999999997433 3488889999
Q ss_pred HHHHHHHHHHHH
Q 013498 263 TEFGKLIADIKA 274 (442)
Q Consensus 263 ~~v~~li~~l~~ 274 (442)
+++.++++.+++
T Consensus 255 ~~l~~lv~~i~~ 266 (280)
T 2qkf_A 255 HLLEDFLIRIKA 266 (280)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999885
No 281
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=86.09 E-value=4.2 Score=40.69 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=77.6
Q ss_pred HHHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCCC----CC-CC
Q 013498 171 AVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA----GR-SD 232 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~eda----sr-~d 232 (442)
..+.+|.|.|.+..+. |+. +....+|-|.+.-.+.+.+.++.+|+. |. . .|.+++.+. .. .+
T Consensus 161 ~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~ 240 (362)
T 4ab4_A 161 NAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADR 240 (362)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTH
T ss_pred HHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCc
Confidence 3466899999998764 232 222345666676667777777777664 32 1 366776431 11 22
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~~v 310 (442)
.+...++++.+.++|+|.|.+.... .-| ++++.+|+.++ ++|..=. |.-...+..+++.| ||.|
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~----iPvi~~G----git~e~a~~~l~~g~aD~V 305 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFG----GPYIVNE----RFDKASANAALASGKADAV 305 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHC----SCEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCC----CCEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 5678899999999999999886533 112 46777777764 2332211 12345667788887 7765
No 282
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=86.03 E-value=13 Score=35.32 Aligned_cols=108 Identities=18% Similarity=0.104 Sum_probs=67.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc---ccCHHHHHHHHHHHHHhCC--CC-cceeEEEeecCCcchHHH
Q 013498 224 SPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG---ITMPTEFGKLIADIKANTP--GI-ENVVISTHCQNDLGLSTA 297 (442)
Q Consensus 224 ~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G---~~~P~~v~~li~~l~~~~p--~~-~~v~i~~H~HNDlGLA~A 297 (442)
+++. +..+.+--..-++.+++.|||.|-+.=-.| ...-..+.+-|..+++..+ +. -++.|+.-.=+|.-.=..
T Consensus 76 gFP~-G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~ 154 (260)
T 1p1x_A 76 NFPH-GNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRK 154 (260)
T ss_dssp STTT-CCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHH
T ss_pred CCCC-CCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHH
Confidence 4433 345556555666777788988887766666 3445667777777766532 11 123444444455543335
Q ss_pred HHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHh
Q 013498 298 NTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKC 335 (442)
Q Consensus 298 NalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~ 335 (442)
-+..|+++|||+|-+|-+ . ..|++.+|++..+.+.
T Consensus 155 a~~ia~eaGADfVKTSTG-f--~~~gAt~e~v~lm~~~ 189 (260)
T 1p1x_A 155 ASEISIKAGADFIKTSTG-K--VAVNATPESARIMMEV 189 (260)
T ss_dssp HHHHHHHTTCSEEECCCS-C--SSCCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCCC-C--CCCCCCHHHHHHHHHH
Confidence 677899999999999852 2 2478999977665554
No 283
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=86.01 E-value=11 Score=36.16 Aligned_cols=64 Identities=17% Similarity=0.194 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCCCC-CCHHHHHHHHHHHHHc-CCcE--EeccCcccc-cCHHHHHH
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIKV-GATT--LNIPDTVGI-TMPTEFGK 267 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~edasr-~d~~~l~~~~~~~~~~-Gad~--I~laDT~G~-~~P~~v~~ 267 (442)
+.+.+.++.|++.|.+.+.+.+..-.+ .+.+.+.+..+.+.++ +... -+++..+|. +.|+.+.+
T Consensus 77 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 77 DEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 445577888889998767666666667 6888888888887765 3332 234556676 55665555
No 284
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=86.00 E-value=5.8 Score=39.73 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..+.++.+.++|++.|.| ||... .|..+.+.|+.+++.+|+ +++.... .....-+..++++||+.|.+
T Consensus 109 ~~~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~---v~Vi~G~----v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPH---LEIIGGN----VATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTT---CEEEEEE----ECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCC---CceEeee----eCCHHHHHHHHHcCCCEEEE
Confidence 346678888999998876 55432 466788899999999875 5555431 12355678899999999998
No 285
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=85.95 E-value=3.4 Score=39.85 Aligned_cols=100 Identities=7% Similarity=-0.073 Sum_probs=64.9
Q ss_pred HhCCCCEEEEeecCChHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHc
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l------~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~ 246 (442)
..+|++.|-+ ..|-. + ..+ ..|.+|.+..++..++-++. . .|...++..+..+++.+.+-+.++.++
T Consensus 46 e~aG~d~ilv--GdSl~-~-~~lG~~dt~~vtldem~~h~~aV~r~~~~--~-~vvaD~pfgsY~s~~~a~~~a~rl~ka 118 (275)
T 3vav_A 46 DRANVDVQLI--GDSLG-N-VLQGQTTTLPVTLDDIAYHTACVARAQPR--A-LIVADLPFGTYGTPADAFASAVKLMRA 118 (275)
T ss_dssp HHTTCSEEEE--CTTHH-H-HTTCCSSSTTCCHHHHHHHHHHHHHTCCS--S-EEEEECCTTSCSSHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEE--CcHHH-H-HHcCCCCCCccCHHHHHHHHHHHHhcCCC--C-CEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 3468988732 32221 1 223 35677777655544332111 2 377777775558999999999999999
Q ss_pred CCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 013498 247 GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 290 (442)
Q Consensus 247 Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HN 290 (442)
|++.|.|-|.. +..+.|+.|.+. .+++--|.=-
T Consensus 119 Ga~aVklEdg~------~~~~~i~~l~~~-----GIpv~gHlgl 151 (275)
T 3vav_A 119 GAQMVKFEGGE------WLAETVRFLVER-----AVPVCAHVGL 151 (275)
T ss_dssp TCSEEEEECCG------GGHHHHHHHHHT-----TCCEEEEEES
T ss_pred CCCEEEECCch------hHHHHHHHHHHC-----CCCEEEecCC
Confidence 99999999984 456677777764 2667777543
No 286
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=85.82 E-value=9 Score=35.19 Aligned_cols=113 Identities=11% Similarity=0.048 Sum_probs=70.4
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCC--hHHHHH--HhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHH
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATS--GIHMEH--KLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYE 238 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~S--d~h~~~--~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~ 238 (442)
.+++.+++.++.+|.+.|.++.... ..|... ....+. +.+.++.+.+++.|++.+.+++.. ....+.+.+
T Consensus 22 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gl~i~~~~~~~--~~~~~~~~~ 95 (262)
T 3p6l_A 22 FPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDA----QTQKEIKELAASKGIKIVGTGVYV--AEKSSDWEK 95 (262)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCH----HHHHHHHHHHHHTTCEEEEEEEEC--CSSTTHHHH
T ss_pred CCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCH----HHHHHHHHHHHHcCCeEEEEeccC--CccHHHHHH
Confidence 4677788888889999998864311 000000 012232 234556677888999633443321 134567889
Q ss_pred HHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 013498 239 ILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQND 291 (442)
Q Consensus 239 ~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HND 291 (442)
.++.+.+.|++.|.+.- | ++.+.++.+..++. ++.|.+|.|..
T Consensus 96 ~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~~~-----gv~l~~En~~~ 138 (262)
T 3p6l_A 96 MFKFAKAMDLEFITCEP--A---LSDWDLVEKLSKQY-----NIKISVHNHPQ 138 (262)
T ss_dssp HHHHHHHTTCSEEEECC--C---GGGHHHHHHHHHHH-----TCEEEEECCSS
T ss_pred HHHHHHHcCCCEEEecC--C---HHHHHHHHHHHHHh-----CCEEEEEeCCC
Confidence 99999999999998862 2 34556665555543 37789998864
No 287
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=85.72 E-value=3.2 Score=41.50 Aligned_cols=89 Identities=17% Similarity=0.240 Sum_probs=65.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCC
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGAR 308 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~ 308 (442)
.-.|.+-..+-++.+.++|+|.|+++ +-. .+-.+-+..+++..+ +||..-.|-|+-+|++ |+++|++
T Consensus 41 ~T~D~~atv~Qi~~l~~aG~diVRva----vp~-~~~a~al~~I~~~~~----vPlvaDiHf~~~lal~----a~e~G~d 107 (366)
T 3noy_A 41 KTHDVEATLNQIKRLYEAGCEIVRVA----VPH-KEDVEALEEIVKKSP----MPVIADIHFAPSYAFL----SMEKGVH 107 (366)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCEEEEE----CCS-HHHHHHHHHHHHHCS----SCEEEECCSCHHHHHH----HHHTTCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeC----CCC-hHHHHHHHHHHhcCC----CCEEEeCCCCHHHHHH----HHHhCCC
Confidence 34688889999999999999998883 223 345678899999874 7899999999988755 8999999
Q ss_pred EEEecccccccccCcc----cHHHHHHHHHhcc
Q 013498 309 QVEVTINGIGERAGNA----SLEEVVMAFKCRG 337 (442)
Q Consensus 309 ~vd~Tv~GlGeraGNa----~lEevv~~L~~~g 337 (442)
.+ .+|. ||. ..++|+...+.++
T Consensus 108 kl--RINP-----GNig~~~~~~~vv~~ak~~~ 133 (366)
T 3noy_A 108 GI--RINP-----GNIGKEEIVREIVEEAKRRG 133 (366)
T ss_dssp EE--EECH-----HHHSCHHHHHHHHHHHHHHT
T ss_pred eE--EECC-----cccCchhHHHHHHHHHHHcC
Confidence 84 4553 554 3456666665543
No 288
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=85.68 E-value=14 Score=35.30 Aligned_cols=145 Identities=12% Similarity=-0.004 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEcc--C-CCC-----hhH-HHHHHHHHHHhcccccccCCccceEeeecccchhhH-
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGF--P-AAS-----KED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDI- 165 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~--p-~~~-----~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI- 165 (442)
...+.++.++-++.|.+.|++.|-+.. + ..+ ..+ .+.++.+.+.. ++ ..+. +.-++...+
T Consensus 31 r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~--------gi-~~ir-~~~~~p~~l~ 100 (304)
T 2qgq_A 31 RSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLN--------GE-FWIR-VMYLHPDHLT 100 (304)
T ss_dssp CBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSS--------SS-CEEE-ECCCCGGGCC
T ss_pred eeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcC--------CC-cEEE-EeeeecccCC
Confidence 357889999999999999999876521 1 111 112 23444443321 11 1111 111233333
Q ss_pred HHHHHHHHhCC--CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEEccCCC-CCCCHHHHHHHH
Q 013498 166 KTAWEAVKYAK--RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSPEDA-GRSDRKFLYEIL 240 (442)
Q Consensus 166 ~~a~e~l~~~g--~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~--~G~~~V~f~~eda-sr~d~~~l~~~~ 240 (442)
+..++.++.+| .+.+++.+-..+-.+...+++. ...+.+.+.++.+++ .|+. +...+.-+ ..-+.+.+.+.+
T Consensus 101 ~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~--~t~e~~~~~i~~l~~~~~gi~-i~~~~IvG~PgEt~ed~~~t~ 177 (304)
T 2qgq_A 101 EEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRT--KSSEELKKMLSSIRERFPDAV-LRTSIIVGFPGETEEDFEELK 177 (304)
T ss_dssp HHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCC--SCHHHHHHHHHHHHHHCTTCE-EEEEEEECCTTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCC--CCHHHHHHHHHHHHhhCCCCE-EEEEEEEeCCCCCHHHHHHHH
Confidence 22345566677 7888875543333444556652 113445567777777 5653 33222111 123567788888
Q ss_pred HHHHHcCCcEEec
Q 013498 241 GEVIKVGATTLNI 253 (442)
Q Consensus 241 ~~~~~~Gad~I~l 253 (442)
+.+.+.+.+.+.+
T Consensus 178 ~~l~~l~~~~v~~ 190 (304)
T 2qgq_A 178 QFVEEIQFDKLGA 190 (304)
T ss_dssp HHHHHHCCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 8888888876654
No 289
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=85.54 E-value=40 Score=35.61 Aligned_cols=207 Identities=12% Similarity=0.049 Sum_probs=119.7
Q ss_pred CCHHHHHHH----HHHHhHcCCCEEEEc-cCCCChhHHH-HHHHHHHHhcccccccCCccceEeeeccc------chhhH
Q 013498 98 LTSKEKLDI----ARQLAKLGVDIIEAG-FPAASKEDFE-AVRTIAKEVGNAVDAESGYVPVICGLSRC------NERDI 165 (442)
Q Consensus 98 fs~e~kl~i----a~~L~~~GV~~IEvG-~p~~~~~d~e-~v~~l~~~~~~~~~~~~~l~~~i~~~~r~------~~~dI 165 (442)
++.++-.+. ++.|.+.|+|.+=+- +| +..+.. .++.+.+.... .|.++.++-. .-..+
T Consensus 119 ~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~--~~~Ea~aa~~a~~~~~~~--------~Pv~vS~t~~~~g~~~~G~~~ 188 (566)
T 1q7z_A 119 TLFEEFYENFRETVEIMVEEGVDGIIFETFS--DILELKAAVLAAREVSRD--------VFLIAHMTFDEKGRSLTGTDP 188 (566)
T ss_dssp BCHHHHHHHHHHHHHHHHHTTCSEEEEEEEC--CHHHHHHHHHHHHHHCSS--------SCEEEEECCCTTSCCTTSCCH
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEeccC--CHHHHHHHHHHHHHhCCC--------CcEEEEEEEcCCCeeCCCCcH
Confidence 555665554 456778999987553 44 334443 33333332111 2445444421 12357
Q ss_pred HHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccC-------CC---CCCCHH
Q 013498 166 KTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPE-------DA---GRSDRK 234 (442)
Q Consensus 166 ~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f~~e-------da---sr~d~~ 234 (442)
+.++..+...+++.|.+-+++.+-|+. ++++..+.. .. .+.+-+. +. ...+|+
T Consensus 189 ~~~~~~l~~~~~~avG~NC~~gp~~~~---------------~~l~~l~~~~~~-p~~vyPNaG~p~~~~~~~~~~~~p~ 252 (566)
T 1q7z_A 189 ANFAITFDELDIDALGINCSLGPEEIL---------------PIFQELSQYTDK-FLVVEPNAGKPIVENGKTVYPLKPH 252 (566)
T ss_dssp HHHHHHHHTSSCSEEEEESSSCHHHHH---------------HHHHHHHHTCCS-EEEEECCSSSCEEETTEEECCCCHH
T ss_pred HHHHHHhhccCCCEEEEeCCCCHHHHH---------------HHHHHHHhcCCC-EEEEEcCCCCCcccCCccccCCCHH
Confidence 888888888888888877766664442 333333332 33 2333221 11 134688
Q ss_pred HHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCC----c-ce--------------eEEE--ee-----
Q 013498 235 FLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGI----E-NV--------------VIST--HC----- 288 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~----~-~v--------------~i~~--H~----- 288 (442)
.+.+.++.+.+.|+..|.=| =-.+|+.++.+-+.++..-|.. . .+ .++. ..
T Consensus 253 ~~a~~~~~~~~~G~~iiGGC---CGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~ds 329 (566)
T 1q7z_A 253 DFAVHIDSYYELGVNIFGGC---CGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKK 329 (566)
T ss_dssp HHHTTHHHHHHTTCSEECCC---TTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHH
T ss_pred HHHHHHHHHHHcCCcEEccc---cCCCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChh
Confidence 89999999999998877533 1268999999988886543321 0 01 0111 11
Q ss_pred ------cCCcchHHHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 289 ------QNDLGLSTANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 289 ------HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
++|.--+++-+..-++.||++||... |......-..++.++..+.
T Consensus 330 f~~~~~~~~~~~a~~~A~~~v~~GAdiIDIgp-g~~~v~~~ee~~rvv~~i~ 380 (566)
T 1q7z_A 330 LWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNF-GIESQIDVRYVEKIVQTLP 380 (566)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHTTCSEEEEEC-SSGGGSCHHHHHHHHHHHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCCHHHHHHHHHHHHH
Confidence 34566788889999999999999984 3333333334444555553
No 290
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=85.52 E-value=8.4 Score=37.38 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcc--------c----ccCH-H
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV--------G----ITMP-T 263 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~--------G----~~~P-~ 263 (442)
.|.++++..+...++ ..... |...++.. .-+++.+.+.++.+.++|+..|.|-|.+ | .+.| +
T Consensus 62 vt~~em~~~~~~I~~---~~~~P-viaD~d~G-yg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~ 136 (295)
T 1s2w_A 62 ASWTQVVEVLEFMSD---ASDVP-ILLDADTG-YGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIE 136 (295)
T ss_dssp --CHHHHHHHHHHHH---TCSSC-EEEECCSS-CSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHH
T ss_pred CCHHHHHHHHHHHHh---cCCCC-EEecCCCC-CCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHH
Confidence 355666665554433 23444 77777655 4577889999999999999999999997 3 2344 4
Q ss_pred HHHHHHHHHHHhCCCCcceeEEEeecCC-----cchHHHHHHHHHHhCCCEEEe
Q 013498 264 EFGKLIADIKANTPGIENVVISTHCQND-----LGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 264 ~v~~li~~l~~~~p~~~~v~i~~H~HND-----lGLA~ANalaAl~aGa~~vd~ 312 (442)
++.+.|+.+++.-.+. +..|-.-+-.. +--++.-+.+..+|||+.|=.
T Consensus 137 e~~~rI~Aa~~a~~~~-~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~ 189 (295)
T 1s2w_A 137 EFALKIKACKDSQTDP-DFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILM 189 (295)
T ss_dssp HHHHHHHHHHHHCSST-TCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhcccC-CcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEE
Confidence 5677777777654221 24444444322 234677788889999998744
No 291
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=85.48 E-value=11 Score=36.63 Aligned_cols=110 Identities=14% Similarity=0.058 Sum_probs=73.8
Q ss_pred EccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCH------HHHHHHHHHHHHhCCCC-cceeEEEeecCCcchH
Q 013498 223 FSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMP------TEFGKLIADIKANTPGI-ENVVISTHCQNDLGLS 295 (442)
Q Consensus 223 f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P------~~v~~li~~l~~~~p~~-~~v~i~~H~HNDlGLA 295 (442)
++++. +..+.+--..-++.+++.||+.|-+.=-.|.+.- +.+++-|+.+++..++. -++.|+.-.=+|.-+=
T Consensus 90 igFP~-G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i 168 (297)
T 4eiv_A 90 VNFPE-GTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDII 168 (297)
T ss_dssp ESTTT-CCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHH
T ss_pred ecCCC-CCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHH
Confidence 46654 4555565555677788889999887777777554 45667777777765432 1344554444554443
Q ss_pred HHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhc
Q 013498 296 TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 296 ~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~ 336 (442)
..-+..|+++||+.|-+|-+ . ..|++.+|++..+.+..
T Consensus 169 ~~A~~ia~~AGADFVKTSTG-f--~~~gAT~edV~lM~~~v 206 (297)
T 4eiv_A 169 SRAAVAALEGGADFLQTSSG-L--GATHATMFTVHLISIAL 206 (297)
T ss_dssp HHHHHHHHHHTCSEEECCCS-S--SSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEcCCC-C--CCCCCCHHHHHHHHHHH
Confidence 45678899999999998864 2 36789999887766543
No 292
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=85.40 E-value=2.4 Score=40.23 Aligned_cols=163 Identities=14% Similarity=0.069 Sum_probs=0.0
Q ss_pred HHHHHHhHcCCCEEEE----ccCCCChhH-HHHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHHHHHhCCCC
Q 013498 105 DIARQLAKLGVDIIEA----GFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWEAVKYAKRP 178 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEv----G~p~~~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e~l~~~g~~ 178 (442)
+-++.|.++|++.+.+ |...-+-.. .+.++.+++..++. +.-+-+--.+.++ ++.+.++ |.+
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~--------~ldvHLmv~~p~~~i~~~~~a----GAd 111 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA--------GMDVHLMVKPVDALIESFAKA----GAT 111 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCS--------CEEEEEECSSCHHHHHHHHHH----TCS
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCC--------eEEEEEeeCCHHHHHHHHHHc----CCC
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec----c
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI----P 254 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l----a 254 (442)
.|.+..-.. +.+.+.++.+|+.|++ +.+.. -..++.+.+.+++. .+|.|.+ +
T Consensus 112 ~itvH~Ea~----------------~~~~~~i~~ir~~G~k-~Gval--np~Tp~e~l~~~l~-----~vD~VlvMsV~P 167 (246)
T 3inp_A 112 SIVFHPEAS----------------EHIDRSLQLIKSFGIQ-AGLAL--NPATGIDCLKYVES-----NIDRVLIMSVNP 167 (246)
T ss_dssp EEEECGGGC----------------SCHHHHHHHHHTTTSE-EEEEE--CTTCCSGGGTTTGG-----GCSEEEEECSCT
T ss_pred EEEEccccc----------------hhHHHHHHHHHHcCCe-EEEEe--cCCCCHHHHHHHHh-----cCCEEEEeeecC
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCcc----eeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 255 DTVGITMPTEFGKLIADIKANTPGIEN----VVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 255 DT~G~~~P~~v~~li~~l~~~~p~~~~----v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
..-|-..-.+.-+.|+.+++..+ + ++|++ |-|.-..|.-.++++||+.+
T Consensus 168 GfgGQ~fi~~~l~KI~~lr~~~~---~~~~~~~I~V----DGGI~~~ti~~~~~aGAD~~ 220 (246)
T 3inp_A 168 GFGGQKFIPAMLDKAKEISKWIS---STDRDILLEI----DGGVNPYNIAEIAVCGVNAF 220 (246)
T ss_dssp TC--CCCCTTHHHHHHHHHHHHH---HHTSCCEEEE----ESSCCTTTHHHHHTTTCCEE
T ss_pred CCCCcccchHHHHHHHHHHHHHH---hcCCCeeEEE----ECCcCHHHHHHHHHcCCCEE
No 293
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=85.38 E-value=31 Score=36.09 Aligned_cols=158 Identities=19% Similarity=0.260 Sum_probs=102.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.+|.+++..|.+.-.+.|+|.|-+-|. .+++|...++.+.+..+.. ...|+-.. +.+.++..-+.+..
T Consensus 213 ~lTekD~~dl~~f~~~~~vD~Ia~SFV-r~a~Dv~~~r~~l~~~g~~-------i~IIAKIE--~~eav~nldeIl~~-- 280 (520)
T 3khd_A 213 IISEKDKNDILNFAIPMGCNFIAASFI-QSADDVRLIRNLLGPRGRH-------IKIIPKIE--NIEGIIHFDKILAE-- 280 (520)
T ss_dssp SSCHHHHHHHHHTHHHHTCCEEEETTC-CSHHHHHHHHHHHTTTTTT-------SEEEEEEC--SHHHHHTHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCC-CCHHHHHHHHHHHHhcCCC-------CcEEEEEC--CHHHHHhHHHHHHh--
Confidence 378899998878888999999999776 5677877777765543211 11222222 34444433222222
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc------cCCCCCCCHHHHHHHHHHHHHcCCcE
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS------PEDAGRSDRKFLYEILGEVIKVGATT 250 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~------~edasr~d~~~l~~~~~~~~~~Gad~ 250 (442)
.|. ++++-.|+=. -+..+++...-+.+++.|+..|.. |.+. +....|-+..++-+++.++.+ |+|.
T Consensus 281 sDG--IMVARGDLgv----Ei~~e~vp~~Qk~iI~~c~~aGKP-Vi~ATQMLeSMi~~p~PTRAEvsDVanAVld-GaDa 352 (520)
T 3khd_A 281 SDG--IMIARGDLGM----EISPEKVFLAQKLMISKCNLQGKP-IITATQMLESMTKNPRPTRAEVTDVANAVLD-GTDC 352 (520)
T ss_dssp SSC--EEECHHHHTT----TSCGGGHHHHHHHHHHHHHHHTCC-EEECCCCCGGGGTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCc--EEEccccccc----cCCHHHHHHHHHHHHHHHHHcCCC-eEEeehhhHHHhcCCCccHHHHHHHHHHHHh-CCCE
Confidence 243 3444444211 134566667778999999999986 5542 234556777888888877765 9999
Q ss_pred Eecc-CcccccCHHHHHHHHHHHHH
Q 013498 251 LNIP-DTVGITMPTEFGKLIADIKA 274 (442)
Q Consensus 251 I~la-DT~G~~~P~~v~~li~~l~~ 274 (442)
|-|. .|.---.|-+.-+.+..+.+
T Consensus 353 vMLSgETA~G~yPveaV~~M~~I~~ 377 (520)
T 3khd_A 353 VMLSGETAGGKFPVEAVTIMSKICL 377 (520)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHH
T ss_pred EEecccccCCcCHHHHHHHHHHHHH
Confidence 9995 67777888887777776654
No 294
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=85.25 E-value=3.1 Score=39.59 Aligned_cols=166 Identities=14% Similarity=0.131 Sum_probs=80.0
Q ss_pred HHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC-CCCEEEEeec
Q 013498 107 ARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA-KRPRIHTFIA 185 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~-g~~~v~i~~~ 185 (442)
.+.|++.|.|.||+|.|.+.+... .++.+.+.+.. +. . .+.|+..+ ..+.++..+..+..+.+ +.+.|.+.+.
T Consensus 29 ~~~l~~~Gad~ielg~pr~~~~g~-~~~~~~~~l~~-~~-~-~~~pn~~~--~~~~~~~~~f~~~a~~agg~~~i~l~i~ 102 (264)
T 1xm3_A 29 KEAVAVSESDILTFAVRRMNIFEA-SQPNFLEQLDL-SK-Y-TLLPNTAG--ASTAEEAVRIARLAKASGLCDMIKVEVI 102 (264)
T ss_dssp HHHHHHHTCSEEEEETTSSTTC--------CTTCCG-GG-S-EEEEECTT--CSSHHHHHHHHHHHHHTTCCSSEEECCB
T ss_pred HHHHHHcCCeEEEEcccccccCCC-CHHHHHHHHHh-cC-C-eEcCCccc--cCCHHHHHHHHHHHHHcCCCCeEEEeec
Confidence 478999999999999985533111 11222222111 00 0 11233321 12333322223333334 3445555332
Q ss_pred CChHHHHHHhCCCHHHHHHHHHHHHHHHHHc---CCCeEE-EccCCCCCCCHHHHHHHHHHHHHcCCcEEec-cCccc--
Q 013498 186 TSGIHMEHKLRKTKQQVVEIARSMVKFARSL---GCDDVE-FSPEDAGRSDRKFLYEILGEVIKVGATTLNI-PDTVG-- 258 (442)
Q Consensus 186 ~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~---G~~~V~-f~~edasr~d~~~l~~~~~~~~~~Gad~I~l-aDT~G-- 258 (442)
... ... ++...+.++.++++ |+. +. +... +++ .++++.+.|++.|.. .-.+|
T Consensus 103 ~d~-------~~~----~~e~~~~~~~a~~~~~~g~~-vi~~~~~-----~~~----~a~~~~~~gad~v~~~~~~~Gt~ 161 (264)
T 1xm3_A 103 GCS-------RSL----LPDPVETLKASEQLLEEGFI-VLPYTSD-----DVV----LARKLEELGVHAIMPGASPIGSG 161 (264)
T ss_dssp CCT-------TTC----CBCHHHHHHHHHHHHHTTCC-EEEEECS-----CHH----HHHHHHHHTCSCBEECSSSTTCC
T ss_pred CCC-------ccc----ccchHHHHHHHHHHHCCCeE-EEEEcCC-----CHH----HHHHHHHhCCCEEEECCcccCCC
Confidence 211 000 12233556666666 885 54 3321 233 356667788887622 11123
Q ss_pred --ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEE
Q 013498 259 --ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVE 311 (442)
Q Consensus 259 --~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd 311 (442)
...| ++++.+++.. + +|+.+- .|.. -.++..++++||+.|-
T Consensus 162 ~~~~~~----~~l~~i~~~~-~---iPviv~----gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 162 QGILNP----LNLSFIIEQA-K---VPVIVD----AGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp CCCSCH----HHHHHHHHHC-S---SCBEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCCH----HHHHHHHhcC-C---CCEEEE----eCCCCHHHHHHHHHcCCCEEE
Confidence 2233 3666677654 2 334332 4665 5788888999999874
No 295
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=84.99 E-value=3.5 Score=40.13 Aligned_cols=82 Identities=27% Similarity=0.314 Sum_probs=51.7
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeccC-cc--c---ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV--G---ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~laD-T~--G---~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
|.++. +++.+.+.++...+.|||.|-+.= ++ | +-..+++.+++..++..... +++|++=+=+ ..-+
T Consensus 38 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT~~-----~~Va 110 (294)
T 2y5s_A 38 DGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYK-----PAVM 110 (294)
T ss_dssp ------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEECCC-----HHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEECCC-----HHHH
Confidence 45544 678888888899999999876652 21 2 33456777777666553211 3678875544 3455
Q ss_pred HHHHHhCCCEEEeccc
Q 013498 300 IAGACAGARQVEVTIN 315 (442)
Q Consensus 300 laAl~aGa~~vd~Tv~ 315 (442)
.+|+++|++.|+-.-+
T Consensus 111 ~aAl~aGa~iINdVsg 126 (294)
T 2y5s_A 111 RAALAAGADLINDIWG 126 (294)
T ss_dssp HHHHHHTCSEEEETTT
T ss_pred HHHHHcCCCEEEECCC
Confidence 6889999999975443
No 296
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=84.92 E-value=9 Score=38.42 Aligned_cols=131 Identities=10% Similarity=0.029 Sum_probs=80.7
Q ss_pred HHHHHH-hCCCCEEEEeecC--------ChHH--H-HHHhCC-CHHHHHHHHHHHHHHHHHc-CCC--eEEEccCCC---
Q 013498 168 AWEAVK-YAKRPRIHTFIAT--------SGIH--M-EHKLRK-TKQQVVEIARSMVKFARSL-GCD--DVEFSPEDA--- 228 (442)
Q Consensus 168 a~e~l~-~~g~~~v~i~~~~--------Sd~h--~-~~~l~~-s~~e~l~~~~~~v~~ar~~-G~~--~V~f~~eda--- 228 (442)
+.+..+ .+|.+.|.+..+. |+.. . ...+|- +.+.-.+.+.+.++.+|+. |-. .|.+++.+.
T Consensus 179 AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 179 GAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp HHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 344456 7899999987653 2211 1 223454 7777777777777777764 321 355666431
Q ss_pred --CCCCHHHHHHHHHHHHHcCCcEEeccCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 229 --GRSDRKFLYEILGEVIKVGATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 229 --sr~d~~~l~~~~~~~~~~Gad~I~laDT~--G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
...+.+...++++.+.++|++.|.+.... +...|. + ++.+++.++ ++|..=.- + -...+..+++
T Consensus 259 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~----iPvi~~G~--i--t~~~a~~~l~ 326 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYS----GVKISNLR--Y--DFEEADQQIR 326 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCC----SCEEEESS--C--CHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCC----CcEEEECC--C--CHHHHHHHHH
Confidence 34567888899999999999999886521 111232 4 777888774 34433221 2 2556677788
Q ss_pred hC-CCEE
Q 013498 305 AG-ARQV 310 (442)
Q Consensus 305 aG-a~~v 310 (442)
.| ||.|
T Consensus 327 ~g~aD~V 333 (379)
T 3aty_A 327 EGKVDAV 333 (379)
T ss_dssp TTSCSEE
T ss_pred cCCCeEE
Confidence 87 7766
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=84.91 E-value=3.2 Score=44.57 Aligned_cols=111 Identities=12% Similarity=0.104 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEccCCCCC-------------------CCH------------HHHHHHHHHHHHcCCc
Q 013498 201 QVVEIARSMVKFARSLGCDDVEFSPEDAGR-------------------SDR------------KFLYEILGEVIKVGAT 249 (442)
Q Consensus 201 e~l~~~~~~v~~ar~~G~~~V~f~~edasr-------------------~d~------------~~l~~~~~~~~~~Gad 249 (442)
+.++..+++++.+++.|.. +.+.+..++| .+| +.+.+.++.+.++|.|
T Consensus 78 ~~~~~~~~~~~~vh~~g~~-i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd 156 (671)
T 1ps9_A 78 SQIPHHRTITEAVHQEGGK-IALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYD 156 (671)
T ss_dssp GGHHHHHHHHHHHHHTTCC-EEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhcCCE-EEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3345556677777888864 5554433222 112 3455666677788888
Q ss_pred EEecc-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEE-----ee-cC--CcchHHHHH
Q 013498 250 TLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVIST-----HC-QN--DLGLSTANT 299 (442)
Q Consensus 250 ~I~la-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~-----H~-HN--DlGLA~ANa 299 (442)
.|-|- |-.|... +..+.++++.+|+.++. +.+|.+ .. |. +..-+..-+
T Consensus 157 ~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~--~~~v~vrls~~~~~~~g~~~~~~~~~a 234 (671)
T 1ps9_A 157 GVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGN--DFIIIYRLSMLDLVEDGGTFAETVELA 234 (671)
T ss_dssp EEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCS--SSEEEEEEEEECCSTTCCCHHHHHHHH
T ss_pred EEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCC--CceEEEEECccccCCCCCCHHHHHHHH
Confidence 87762 3334322 34467888888888753 345544 11 22 222233333
Q ss_pred HHHHHhCCCEEEecc
Q 013498 300 IAGACAGARQVEVTI 314 (442)
Q Consensus 300 laAl~aGa~~vd~Tv 314 (442)
.+.-++|+++|+++.
T Consensus 235 ~~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 235 QAIEAAGATIINTGI 249 (671)
T ss_dssp HHHHHHTCSEEEEEE
T ss_pred HHHHhcCCCEEEcCC
Confidence 444567999988754
No 298
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=84.90 E-value=14 Score=35.57 Aligned_cols=137 Identities=16% Similarity=0.180 Sum_probs=80.1
Q ss_pred HHHHHHhHcCCCEEEEcc---------CCCC----hhHHHHHHHHHHHhcccccccCCccceEeeecc---cchhh-HHH
Q 013498 105 DIARQLAKLGVDIIEAGF---------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR---CNERD-IKT 167 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~---------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r---~~~~d-I~~ 167 (442)
.-++.++++|+|.|=+|. |... ++....++.+++-.++ .+.++.+-- .+.++ ++.
T Consensus 40 ~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~--------~~vvaD~pfgsY~s~~~a~~~ 111 (275)
T 3vav_A 40 SFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPR--------ALIVADLPFGTYGTPADAFAS 111 (275)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCS--------SEEEEECCTTSCSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCC--------CCEEEecCCCCCCCHHHHHHH
Confidence 347888999999998873 3221 2234455666553322 123332221 24444 344
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EccC-----C----CCCCC--
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPE-----D----AGRSD-- 232 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~----f~~e-----d----asr~d-- 232 (442)
+.+.++ .|+..|++-.... ..+.|+.+.+.|++ |+ +.+. . .+|++
T Consensus 112 a~rl~k-aGa~aVklEdg~~------------------~~~~i~~l~~~GIp-v~gHlgltPq~~~~~gg~~vqgrt~~~ 171 (275)
T 3vav_A 112 AVKLMR-AGAQMVKFEGGEW------------------LAETVRFLVERAVP-VCAHVGLTPQSVHAFGGFKVQGKTEAG 171 (275)
T ss_dssp HHHHHH-TTCSEEEEECCGG------------------GHHHHHHHHHTTCC-EEEEEESCGGGHHHHC---CCCCSHHH
T ss_pred HHHHHH-cCCCEEEECCchh------------------HHHHHHHHHHCCCC-EEEecCCCceEEeccCCeEEEcCCHHH
Confidence 445454 5999999876532 23566667788987 44 1111 1 24554
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCC
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p 277 (442)
.+.+.+-++++.++||+.|.+. +.|.+ +++.+.+.++
T Consensus 172 a~~~i~rA~a~~eAGA~~ivlE-----~vp~~---~a~~It~~l~ 208 (275)
T 3vav_A 172 AAQLLRDARAVEEAGAQLIVLE-----AVPTL---VAAEVTRELS 208 (275)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEE-----SCCHH---HHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCEEEec-----CCCHH---HHHHHHHhCC
Confidence 3577777888899999999885 33554 4555666653
No 299
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=84.83 E-value=7.9 Score=37.06 Aligned_cols=137 Identities=16% Similarity=0.171 Sum_probs=79.8
Q ss_pred HHHHHHhHcCCCEEEEcc---------CCCC----hhHHHHHHHHHHHhcccccccCCccceEeeecc--c-chhh-HHH
Q 013498 105 DIARQLAKLGVDIIEAGF---------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR--C-NERD-IKT 167 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~---------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r--~-~~~d-I~~ 167 (442)
.-++.++++|+|.|=+|. |... ++.....+.+++-..+. +.+..+.- . +.++ ++.
T Consensus 28 ~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~--------~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 28 SFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNC--------LLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp HHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTS--------EEEEECCTTSSSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCC--------cEEEECCCCCcCCHHHHHHH
Confidence 347888999999999983 2221 22344556666543221 22222221 1 2222 333
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE----EccC---------CCCCCCH-
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE----FSPE---------DAGRSDR- 233 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~----f~~e---------dasr~d~- 233 (442)
+.+.++ +|...|++-.. +.+.+.|+.+.+.|++ |+ +++. -.+|++.
T Consensus 100 a~rl~k-aGa~aVklEgg------------------~e~~~~I~al~~agip-V~gHiGLtPq~v~~~ggf~v~grt~~~ 159 (264)
T 1m3u_A 100 AATVMR-AGANMVKIEGG------------------EWLVETVQMLTERAVP-VCGHLGLTPQSVNIFGGYKVQGRGDEA 159 (264)
T ss_dssp HHHHHH-TTCSEEECCCS------------------GGGHHHHHHHHHTTCC-EEEEEESCGGGHHHHTSSCCCCCSHHH
T ss_pred HHHHHH-cCCCEEEECCc------------------HHHHHHHHHHHHCCCC-eEeeecCCceeecccCCeEEEeCCHHH
Confidence 444454 89999887543 1234567777888986 54 2221 1245543
Q ss_pred -HHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCC
Q 013498 234 -KFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP 277 (442)
Q Consensus 234 -~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p 277 (442)
+.+.+-++++.++||+.|.+.= .|. ++.+.+.+.++
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~ 196 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLEC-----VPV---ELAKRITEALA 196 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEES-----CCH---HHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCcEEEEec-----CCH---HHHHHHHHhCC
Confidence 6777788889999999998842 353 35556666664
No 300
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=84.72 E-value=3.8 Score=39.49 Aligned_cols=84 Identities=11% Similarity=0.039 Sum_probs=71.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+...+ +..+ -.+|+.--++..+..|-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaG-vg~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQ-VGSLNLNDVMELVKFSNE 89 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEE-CCCSCHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEe-eCCCCHHHHHHHHHHHHh
Confidence 36889999999999999999999999999986 8899999999999887753 3333 467888889999999999
Q ss_pred hCCCEEEeccc
Q 013498 305 AGARQVEVTIN 315 (442)
Q Consensus 305 aGa~~vd~Tv~ 315 (442)
+||+.+=..--
T Consensus 90 ~Gadavlv~~P 100 (288)
T 2nuw_A 90 MDILGVSSHSP 100 (288)
T ss_dssp SCCSEEEECCC
T ss_pred cCCCEEEEcCC
Confidence 99999866543
No 301
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=84.69 E-value=5.1 Score=40.19 Aligned_cols=81 Identities=10% Similarity=-0.088 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHcCCcEEecc-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 013498 234 KFLYEILGEVIKVGATTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQND 291 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~la-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~H~HND 291 (442)
+.+.+.++.+.++|.|.|-|- |-.|... +..+.++|+.+|+.++.. .+.+-++..+.
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~ 245 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccc
Confidence 456677788889999987762 4445433 334678889999988641 24444443322
Q ss_pred -----cch----HHHHHHHHHHhCCCEEEeccc
Q 013498 292 -----LGL----STANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 292 -----lGL----A~ANalaAl~aGa~~vd~Tv~ 315 (442)
.+. ++.-+-+.-++|+++|+.+..
T Consensus 246 ~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 122 333334445679999999754
No 302
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=84.66 E-value=6.8 Score=39.14 Aligned_cols=106 Identities=20% Similarity=0.234 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|.+.|++.||=-+| ++|++..+++++..+- |...+=.-.+..|++..++.
T Consensus 202 n~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~i---------PIa~dE~~~~~~~~~~~i~~--- 266 (383)
T 3i4k_A 202 NARWDRRTALHYLPILAEAGVELFEQPTP---ADDLETLREITRRTNV---------SVMADESVWTPAEALAVVKA--- 266 (383)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEESCSC---TTCHHHHHHHHHHHCC---------EEEESTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHhhCCC---------CEEecCccCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++-.-+..+++++..|++.|+. +..+.+..+
T Consensus 267 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es 307 (383)
T 3i4k_A 267 QAADVIAL-------------KTTKHGGLLESKKIAAIAEAGGLA-CHGATSLEG 307 (383)
T ss_dssp TCCSEEEE-------------CTTTTTSHHHHHHHHHHHHHTTCE-EEECCSCCC
T ss_pred CCCCEEEE-------------cccccCCHHHHHHHHHHHHHcCCe-EEeCCCCcc
No 303
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=84.59 E-value=5.6 Score=39.44 Aligned_cols=100 Identities=17% Similarity=0.106 Sum_probs=65.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.++.++-+++++.|.+.|++.||-.+| +++++..+++.+... +|.+.+=.-.+.++++..++. ..
T Consensus 201 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPI~~dE~~~~~~~~~~~i~~---~~ 265 (371)
T 2ovl_A 201 KWTVDGAIRAARALAPFDLHWIEEPTI---PDDLVGNARIVRESG---------HTIAGGENLHTLYDFHNAVRA---GS 265 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHHHC---------SCEEECTTCCSHHHHHHHHHH---TC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhhCC---------CCEEeCCCCCCHHHHHHHHHc---CC
Confidence 468899999999999999999997554 467788888877542 232222111246677766654 24
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
++.|.+ .. .+-.-+..+.++++.|++.|+. +..++
T Consensus 266 ~d~v~i--k~-----------~~~GGi~~~~~i~~~A~~~gi~-~~~h~ 300 (371)
T 2ovl_A 266 LTLPEP--DV-----------SNIGGYTTFRKVAALAEANNML-LTSHG 300 (371)
T ss_dssp CSEECC--CT-----------TTTTSHHHHHHHHHHHHHTTCC-EEECS
T ss_pred CCEEee--Cc-----------cccCCHHHHHHHHHHHHHcCCe-Ecccc
Confidence 555543 11 1112256677889999999996 77765
No 304
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=84.58 E-value=12 Score=36.34 Aligned_cols=200 Identities=15% Similarity=0.130 Sum_probs=103.6
Q ss_pred EEeCC----CCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee
Q 013498 82 VFDTT----LRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL 157 (442)
Q Consensus 82 I~DtT----LRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~ 157 (442)
.+.+| ++||.+ ..+.+..++.++.+.+.|-++|.+|.....-++.+.++++...+.. +.+... +| |+.
T Consensus 18 riNvTg~~sf~~~~~----~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~-~~~~~~-vp-isI- 89 (300)
T 3k13_A 18 RCNVAGSRKFLRLVN----EKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMS-EPEIAR-VP-VMI- 89 (300)
T ss_dssp EEETTTCHHHHHHHH----TTCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHT-CHHHHT-SC-EEE-
T ss_pred eccCCCCHHHHHHHh----cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH-hhhcCC-Ce-EEE-
Confidence 45677 566654 3578999999999999999999998632211122222222222110 000001 22 221
Q ss_pred cccchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC--CCCCCH--
Q 013498 158 SRCNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED--AGRSDR-- 233 (442)
Q Consensus 158 ~r~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed--asr~d~-- 233 (442)
=-.+.+-++.++++. +|.+.|+ ++|- ...+ +++.++++.+++.|.. |.....| ..-.+.
T Consensus 90 DT~~~~V~eaaL~~~--~Ga~iIN---dIs~--------~~~d---~~~~~~~~l~a~~ga~-vV~mh~d~~G~p~t~~~ 152 (300)
T 3k13_A 90 DSSKWEVIEAGLKCL--QGKSIVN---SISL--------KEGE---EVFLEHARIIKQYGAA-TVVMAFDEKGQADTAAR 152 (300)
T ss_dssp ECSCHHHHHHHHHHC--SSCCEEE---EECS--------TTCH---HHHHHHHHHHHHHTCE-EEEESEETTEECCSHHH
T ss_pred eCCCHHHHHHHHHhc--CCCCEEE---eCCc--------ccCC---hhHHHHHHHHHHhCCe-EEEEeeCCCCCCCCHHH
Confidence 123556667777642 3776554 3331 1112 2334567778889985 4443322 111222
Q ss_pred --HHHHHHHHHH-HHcCC--cEEecc---CcccccCHH------HHHHHHHHHHHhCCCCcceeEEEeecC-CcchH---
Q 013498 234 --KFLYEILGEV-IKVGA--TTLNIP---DTVGITMPT------EFGKLIADIKANTPGIENVVISTHCQN-DLGLS--- 295 (442)
Q Consensus 234 --~~l~~~~~~~-~~~Ga--d~I~la---DT~G~~~P~------~v~~li~~l~~~~p~~~~v~i~~H~HN-DlGLA--- 295 (442)
++..++.+.+ .++|+ +.|.|= -++|....+ ++-+-++.+++.+|+ +++.+=..| .+|+-
T Consensus 153 ~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg---~pvl~G~SnkSfglp~~~ 229 (300)
T 3k13_A 153 KIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPG---AHVSGGVSNLSFSFRGNN 229 (300)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTT---CEECCBGGGGGGGGTTCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCC---CCEEEEECcccccCCCCc
Confidence 3444555554 78898 445541 123333332 355556667767875 445443444 24542
Q ss_pred ----HHH---HHHHHHhCCCE
Q 013498 296 ----TAN---TIAGACAGARQ 309 (442)
Q Consensus 296 ----~AN---alaAl~aGa~~ 309 (442)
..| ...|+++|.+.
T Consensus 230 ~~R~~~n~~fl~~ai~~Gld~ 250 (300)
T 3k13_A 230 YIREAMHAVFLYHAIQQGMDM 250 (300)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE
T ss_pred chhHHHHHHHHHHHHHcCCCE
Confidence 122 23678889887
No 305
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=84.54 E-value=5.3 Score=38.37 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=70.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh
Q 013498 229 GRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA 305 (442)
Q Consensus 229 sr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~a 305 (442)
+..|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+...+ +.++ -.+|+.--++..+..|-++
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~G-vg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQ-VASLNADEAIALAKYAESR 89 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEE-CCCSSHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEe-eCCCCHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999986 8899999999999988763 3333 3678888899999999999
Q ss_pred CCCEEEeccc
Q 013498 306 GARQVEVTIN 315 (442)
Q Consensus 306 Ga~~vd~Tv~ 315 (442)
||+.+=+..-
T Consensus 90 Gadavlv~~P 99 (286)
T 2r91_A 90 GAEAVASLPP 99 (286)
T ss_dssp TCSEEEECCS
T ss_pred CCCEEEEcCC
Confidence 9999866543
No 306
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=84.53 E-value=4.6 Score=40.22 Aligned_cols=131 Identities=11% Similarity=0.051 Sum_probs=82.4
Q ss_pred HHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEccCCCC---CCCHH
Q 013498 172 VKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDAG---RSDRK 234 (442)
Q Consensus 172 l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~---~V~f~~edas---r~d~~ 234 (442)
.+.+|.|.|.+..+- |+. +....+|-+.+.-.+.+.+.++.+|+. |.+ .|.+++.+.. ..+.+
T Consensus 167 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~ 246 (363)
T 3l5l_A 167 ARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE 246 (363)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH
T ss_pred HHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH
Confidence 455799999887653 221 122345667777777788888888876 322 2556654321 14567
Q ss_pred HHHHHHHHHHHcCCcEEeccCcc--cc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHHHHhC-
Q 013498 235 FLYEILGEVIKVGATTLNIPDTV--GI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAGACAG- 306 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~laDT~--G~----~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL-A~ANalaAl~aG- 306 (442)
...++++.+.++|+|.|.+.... .. ..|....++++.+++.+. ++|..=. |. -...+..+++.|
T Consensus 247 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~G----gI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 247 ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK----LPVTSAW----GFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT----CCEEECS----STTSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC----CcEEEeC----CCCCHHHHHHHHHCCC
Confidence 88899999999999999887521 11 112223567777887763 4444321 22 256677888998
Q ss_pred CCEE
Q 013498 307 ARQV 310 (442)
Q Consensus 307 a~~v 310 (442)
||.|
T Consensus 319 aD~V 322 (363)
T 3l5l_A 319 LDLV 322 (363)
T ss_dssp CSEE
T ss_pred ccEE
Confidence 8876
No 307
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=84.52 E-value=14 Score=36.17 Aligned_cols=111 Identities=11% Similarity=0.076 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEF 265 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v 265 (442)
.|.++++..+....+-. ..... |...+++. .-+++.+.+.++.+.++|+..|.|-|.++ ....+++
T Consensus 69 vt~~em~~~~~~i~r~~-~~~~P-viaD~d~G-yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~ 145 (307)
T 3lye_A 69 AQLHDMRDNADMIANLD-PFGPP-LIADMDTG-YGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEY 145 (307)
T ss_dssp SCHHHHHHHHHHHHTSS-TTSCC-EEEECTTC-SSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHH
T ss_pred CCHHHHHHHHHhhhccC-CCCCc-EEEECCCC-CCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHH
Confidence 46777766554443211 11244 77777654 45788899999999999999999999985 3455666
Q ss_pred HHHHHHHHHhCC--CCcceeEEEeecC----CcchHHHHHHHHHHhCCCEEE
Q 013498 266 GKLIADIKANTP--GIENVVISTHCQN----DLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 266 ~~li~~l~~~~p--~~~~v~i~~H~HN----DlGLA~ANalaAl~aGa~~vd 311 (442)
.+.|+..++.-. +. +..|-.-+-. ++--|+.-+.+..+||||.|=
T Consensus 146 ~~rI~Aa~~A~~~~~~-d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~if 196 (307)
T 3lye_A 146 LVRIRAAVATKRRLRS-DFVLIARTDALQSLGYEECIERLRAARDEGADVGL 196 (307)
T ss_dssp HHHHHHHHHHHHHTTC-CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhcCC-CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEE
Confidence 677766654321 11 2334333322 233577778888999999973
No 308
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=84.45 E-value=8.7 Score=38.47 Aligned_cols=81 Identities=9% Similarity=-0.073 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHcCCcEEec-------------------cCcccccCH---HHHHHHHHHHHHhCCCCcceeEEEeecCC
Q 013498 234 KFLYEILGEVIKVGATTLNI-------------------PDTVGITMP---TEFGKLIADIKANTPGIENVVISTHCQND 291 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~l-------------------aDT~G~~~P---~~v~~li~~l~~~~p~~~~v~i~~H~HND 291 (442)
+.+.+.++.+.++|.|.|-| .|-.|...- ..+.++|+.+++.++.. .+-+-+...+.
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~ 244 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLE 244 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEEeccccc
Confidence 45667777888899998877 245555433 33667789999988631 23333333321
Q ss_pred c-----ch----HHHHHHHHHHhCCCEEEeccc
Q 013498 292 L-----GL----STANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 292 l-----GL----A~ANalaAl~aGa~~vd~Tv~ 315 (442)
+ |. ++.-+.+.-++|+++|+++-.
T Consensus 245 ~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 245 LFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp CTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 1 22 233344555789999998764
No 309
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=84.31 E-value=5.1 Score=37.60 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=68.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCc-ceeEEEeec---CCcchHHHHHHHH
Q 013498 230 RSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIE-NVVISTHCQ---NDLGLSTANTIAG 302 (442)
Q Consensus 230 r~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~-~v~i~~H~H---NDlGLA~ANalaA 302 (442)
..+.+--..-++.+++.|||.|-+.=-+|. ..-+.+.+-|..+++..++.. ++.|+...- .+.-.=..-+..|
T Consensus 76 ~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia 155 (231)
T 3ndo_A 76 KHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVA 155 (231)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHH
Confidence 344555556677888899999988877787 566778888888888775421 233333221 0222223455678
Q ss_pred HHhCCCEEEecccccccccCcccHHHHHHHHHhc
Q 013498 303 ACAGARQVEVTINGIGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 303 l~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~ 336 (442)
.++|||+|-+|.+ .+. .|++.+|++-.+.+..
T Consensus 156 ~~aGADfVKTSTG-f~~-~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 156 RDAGADFVKTSTG-FHP-SGGASVQAVEIMARTV 187 (231)
T ss_dssp HHTTCSEEECCCS-CCT-TCSCCHHHHHHHHHHH
T ss_pred HHHCcCEEEcCCC-CCC-CCCCCHHHHHHHHHHh
Confidence 8999999988853 221 4678888876655543
No 310
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=84.29 E-value=3.5 Score=40.30 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
.+++.+.+.++...+.|++.|.+.-+-| ..+++++.++++..++. ++++.+|+|.+.+ .
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~~-----i 233 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA-----GIKVAAHAHGASG-----I 233 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT-----TCEEEEEECSHHH-----H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC-----CCEEEEEeCCHHH-----H
Confidence 3466777777777778888777664422 47889999999888875 3779999988753 4
Q ss_pred HHHHHhCCCEEE
Q 013498 300 IAGACAGARQVE 311 (442)
Q Consensus 300 laAl~aGa~~vd 311 (442)
..++++|++.|.
T Consensus 234 ~~~~~~g~~~i~ 245 (403)
T 3gnh_A 234 REAVRAGVDTIE 245 (403)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHHhCCCEEe
Confidence 567788998764
No 311
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=84.20 E-value=4.6 Score=40.33 Aligned_cols=127 Identities=14% Similarity=0.077 Sum_probs=76.7
Q ss_pred HHHHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCCC----CCC-
Q 013498 170 EAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA----GRS- 231 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~eda----sr~- 231 (442)
+..+.+|.|.|.+..+. |+. +....+|-|.+.-.+.+.+.++.+|+. |. . .|.+++.+. ...
T Consensus 168 ~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~ 247 (361)
T 3gka_A 168 ENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSD 247 (361)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSC
T ss_pred HHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCC
Confidence 33466899999998764 222 222334556666566666666666654 32 1 356676431 111
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEE
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQV 310 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~~v 310 (442)
+.+...++++.+.++|+|.|.+.... ..| ++++.+|+.++ ++|..=. |.-...+..+++.| ||.|
T Consensus 248 ~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~----iPvi~~G----git~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 248 PAATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFG----GPFIVNE----NFTLDSAQAALDAGQADAV 313 (361)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHC----SCEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcC----CCEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 25678899999999999999886532 112 56777777764 2332211 12355677788887 7765
No 312
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=84.17 E-value=5.4 Score=39.18 Aligned_cols=158 Identities=11% Similarity=0.121 Sum_probs=93.1
Q ss_pred chhhHHHH-HHHHH---hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCCC-eEEEccCCCCCCCHH
Q 013498 161 NERDIKTA-WEAVK---YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-LGCD-DVEFSPEDAGRSDRK 234 (442)
Q Consensus 161 ~~~dI~~a-~e~l~---~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~-~G~~-~V~f~~edasr~d~~ 234 (442)
.++|+.+. ++.++ .-|+..+.++. ++ +.....|.+.+++++.+.+.++.+++ .|+. .+.+++. -+.+++
T Consensus 72 t~ed~~~~a~~~~~~~~~dgV~y~Eir~--~P-~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~--R~~~~~ 146 (326)
T 3pao_A 72 TEQDFYDLTWAYLQKCKAQNVVHVEPFF--DP-QTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL--RHLSEE 146 (326)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEECCEE--CH-HHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE--TTSCHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEE--Ch-HHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC--CCCCHH
Confidence 46666543 33322 23544444433 23 33335688999999999999887764 5763 1233332 234677
Q ss_pred HHHHHHHHHHHc--CCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEE
Q 013498 235 FLYEILGEVIKV--GATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 311 (442)
Q Consensus 235 ~l~~~~~~~~~~--Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~-aGa~~vd 311 (442)
...+.++.+.+. ++..|-|+=.=....|..+.+.++..++. ++++.+|+....+ ..+...|+. .|++.|
T Consensus 147 ~a~~~~~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~-----gl~~~~HagE~~~--~~~i~~al~~lg~~ri- 218 (326)
T 3pao_A 147 QAQKTLDQALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSE-----GFLTVAHAGEEGP--PEYIWEALDLLKVERI- 218 (326)
T ss_dssp HHHHHHHHHGGGGGGCSEEEEESCCTTCCGGGGHHHHHHHHHT-----TCEECEEESSSSC--HHHHHHHHHTTCCSSE-
T ss_pred HHHHHHHHHhhccccceeeCCCCCCCCCCHHHHHHHHHHHHHc-----CCceeeecCCCCC--HHHHHHHHhcCCCcee-
Confidence 777777777665 34455443221245678888888887764 3678899987754 356677885 798875
Q ss_pred ecccccccccCcccHHHHHHHHHhcc
Q 013498 312 VTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 312 ~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
|-|-+.-. =++++..|..++
T Consensus 219 ----gHgv~l~~--d~~l~~~l~~~~ 238 (326)
T 3pao_A 219 ----DHGVRAFE--DERLMRRLIDEQ 238 (326)
T ss_dssp ----EECGGGGG--CHHHHHHHHHHT
T ss_pred ----eeeeeecc--cHHHHHHHHHcC
Confidence 22222211 144666666653
No 313
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=84.12 E-value=44 Score=34.99 Aligned_cols=166 Identities=16% Similarity=0.230 Sum_probs=104.4
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.+|.+++.++.+.-.+.|||+|-+-|. .+++|...+|.+.+..+........-...|+-.. +.+.++.--+.+..
T Consensus 212 ~lTekD~~D~l~fa~~~~vD~ialSFV-r~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE--~~~av~NldeIi~~-- 286 (526)
T 4drs_A 212 IIGDKDRHDIVDFALKYNLDFIALSFV-QNGADVQLCRQIISENTQYSNGIPSSIKIISKIE--NLEGVINFDSICSE-- 286 (526)
T ss_dssp SSCHHHHHHHHHTTTTTTCSEEEETTC-CSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEEC--SHHHHHTHHHHHHH--
T ss_pred cccchhHHHHHHHHHHhccCeeeeccc-CchhhHHHHHHHHHhhCcccccccccceeeeehh--ccHHHHHHHHHHhh--
Confidence 467788888888889999999999776 5688888888877653321000000112333333 34444332222222
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc------cCCCCCCCHHHHHHHHHHHHHcCCcE
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS------PEDAGRSDRKFLYEILGEVIKVGATT 250 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~------~edasr~d~~~l~~~~~~~~~~Gad~ 250 (442)
.|.| .++=-|+=.+ ...+++-..-+.+++.|+..|.. |.+. +....+-+..++-+++.++.+ |+|.
T Consensus 287 sDgI--MVARGDLgvE----ip~e~vp~~QK~II~~c~~~gKP-VI~ATQmLeSMi~np~PTRAEvsDVAnAV~D-GaDa 358 (526)
T 4drs_A 287 SDGI--MVARGDLGME----IPPEKIFVAQKCMISKCNVAGKP-VVTATQMLESMIKSNRPTRAEMTDVANAVLD-GSDC 358 (526)
T ss_dssp SSEE--EEECTTHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESCTTGGGGSSSSCCHHHHHHHHHHHHH-TCSE
T ss_pred ccEE--EEECCccccc----CCHHHHHHHHHHHHHHHHHcCCe-EEEhhhhhHHHhhCCCCCCchHHHHHHHHHh-CCce
Confidence 2443 3444443322 24455556667899999999986 5552 224556777888888887765 9999
Q ss_pred Eecc-CcccccCHHHHHHHHHHHHHh
Q 013498 251 LNIP-DTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 251 I~la-DT~G~~~P~~v~~li~~l~~~ 275 (442)
|.|. -|.=.-.|.+.-+.+..+.+.
T Consensus 359 vMLSgETA~G~yPveaV~~m~~I~~~ 384 (526)
T 4drs_A 359 VMLSGETANGAFPFDAVNVMSRVCAQ 384 (526)
T ss_dssp EEESHHHHSCSCHHHHHHHHHHHHHH
T ss_pred EEEcchhhcccCHHHHHHHHHHHHHH
Confidence 9998 677778888877777666543
No 314
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=83.91 E-value=3.9 Score=39.47 Aligned_cols=84 Identities=14% Similarity=0.071 Sum_probs=70.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
.++.|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+...+ +..+ -.+|+.--++..+..|-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaG-vg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQ-VGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEE-CCCSCHHHHHHHHHHGGG
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEe-cCCCCHHHHHHHHHHHHh
Confidence 36789999999999999999999999999986 8899999999999987753 3333 367888889999999999
Q ss_pred hCCCEEEeccc
Q 013498 305 AGARQVEVTIN 315 (442)
Q Consensus 305 aGa~~vd~Tv~ 315 (442)
+||+.+=+..-
T Consensus 90 ~Gadavlv~~P 100 (293)
T 1w3i_A 90 FDIVGIASYAP 100 (293)
T ss_dssp SCCSEEEEECC
T ss_pred cCCCEEEEcCC
Confidence 99999866433
No 315
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=83.74 E-value=20 Score=35.59 Aligned_cols=163 Identities=15% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccC------------HHHHHHHHHH
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITM------------PTEFGKLIAD 271 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~------------P~~v~~li~~ 271 (442)
++++++.+.|++.|+..-.|++ .+.+.+..+++.+.+.+...|.=.-..+.-. ...+..++..
T Consensus 7 ~~~~~ll~~A~~~~yAV~AfNv-----~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~ 81 (349)
T 3elf_A 7 EVYAEMLGQAKQNSYAFPAINC-----TSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHV 81 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEC-----CSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCceEEEEee-----CCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHH
Q ss_pred HHHhCCCCcceeEEEee-cC-Ccch----------HHHHHHHHHHhCCCE--EEeccccccc------------------
Q 013498 272 IKANTPGIENVVISTHC-QN-DLGL----------STANTIAGACAGARQ--VEVTINGIGE------------------ 319 (442)
Q Consensus 272 l~~~~p~~~~v~i~~H~-HN-DlGL----------A~ANalaAl~aGa~~--vd~Tv~GlGe------------------ 319 (442)
+.+.++ +||.+|. |- +..+ ......+++++|.+- +|+|-..+-|
T Consensus 82 ~A~~~~----VPVaLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvs 157 (349)
T 3elf_A 82 IAAKYP----VNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKII 157 (349)
T ss_dssp HHTTSS----SCEEEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHCC----CCEEEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCe
Q ss_pred -------------ccCc-------ccHHHHHHHHHhcc---------------ccccCC-ccCCCChhHHHHHHHHHHHH
Q 013498 320 -------------RAGN-------ASLEEVVMAFKCRG---------------EHILGG-LYTGINTRHIVMASKMVEEY 363 (442)
Q Consensus 320 -------------raGN-------a~lEevv~~L~~~g---------------~~~~~G-~~tgidl~~L~~ls~~v~~~ 363 (442)
...+ +..|+...+.+..| -+-.|. -...+|++.|.++.+.+.+-
T Consensus 158 VEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~ 237 (349)
T 3elf_A 158 LEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAK 237 (349)
T ss_dssp EEEEESCCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHH
T ss_pred EEEEeeccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhh
Q ss_pred hCCC-CCCCCccc
Q 013498 364 TGLH-VQPHKAIV 375 (442)
Q Consensus 364 ~g~~-i~~~~piv 375 (442)
.|.+ -....|+|
T Consensus 238 ~~~~~~~~~vpLV 250 (349)
T 3elf_A 238 LGLPADAKPFDFV 250 (349)
T ss_dssp HTCCTTCCCCCEE
T ss_pred cCCccccCCCcEE
No 316
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=83.73 E-value=7.8 Score=38.65 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhC
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANT 276 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~ 276 (442)
++.++.. +.++.+|+.+-..+.++.- .+ + .+.++.+.++|+|.|.| |+. ...|..+.+.++.+++.+
T Consensus 78 ~s~e~~~----~~I~~vk~~~~~pvga~ig--~~-~----~e~a~~l~eaGad~I~l-d~a-~G~~~~~~~~i~~i~~~~ 144 (361)
T 3khj_A 78 MDMESQV----NEVLKVKNSGGLRVGAAIG--VN-E----IERAKLLVEAGVDVIVL-DSA-HGHSLNIIRTLKEIKSKM 144 (361)
T ss_dssp SCHHHHH----HHHHHHHHTTCCCCEEEEC--TT-C----HHHHHHHHHTTCSEEEE-CCS-CCSBHHHHHHHHHHHHHC
T ss_pred CCHHHHH----HHHHHHHhccCceEEEEeC--CC-H----HHHHHHHHHcCcCeEEE-eCC-CCCcHHHHHHHHHHHHhc
Confidence 4555444 4556666665222333321 11 1 56778888999998876 322 245778888999999987
Q ss_pred CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 277 PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 277 p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
+ +++.+..= ....-+..++++||+.|.++
T Consensus 145 ~----~~Vivg~v----~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 145 N----IDVIVGNV----VTEEATKELIENGADGIKVG 173 (361)
T ss_dssp C----CEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred C----CcEEEccC----CCHHHHHHHHHcCcCEEEEe
Confidence 3 44544211 22455788899999999984
No 317
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=83.70 E-value=11 Score=36.95 Aligned_cols=99 Identities=19% Similarity=0.246 Sum_probs=68.5
Q ss_pred CCCHHHHHHHHHHHhHcCCC--EEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVD--IIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVK 173 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~--~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~ 173 (442)
.++.++-+++++.|++.|++ .||=-+| +++++..+++.+... +| |++=.+ .+..+++..++.
T Consensus 192 ~~~~~~a~~~~~~l~~~~i~~~~iE~P~~---~~~~~~~~~l~~~~~---------ip-ia~dE~~~~~~~~~~~i~~-- 256 (345)
T 2zad_A 192 GYTQKEAVEFARAVYQKGIDIAVYEQPVR---REDIEGLKFVRFHSP---------FP-VAADESARTKFDVMRLVKE-- 256 (345)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCSEEECCSC---TTCHHHHHHHHHHSS---------SC-EEESTTCCSHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeeeCCCC---cccHHHHHHHHHhCC---------CC-EEEeCCcCCHHHHHHHHHh--
Confidence 47899999999999999999 9996443 467888888877531 23 222222 256677766654
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
...+.|.+ +..+ .-+..+.++++.|+++|+. +.++..
T Consensus 257 -~~~d~v~i-------------k~~~-GGit~~~~i~~~A~~~g~~-~~~~~~ 293 (345)
T 2zad_A 257 -EAVDYVNI-------------KLMK-SGISDALAIVEIAESSGLK-LMIGCM 293 (345)
T ss_dssp -TCCSEEEE-------------CHHH-HHHHHHHHHHHHHHTTTCE-EEECCS
T ss_pred -CCCCEEEE-------------eccc-ccHHHHHHHHHHHHHcCCe-EEEecC
Confidence 24566553 2234 5578888999999999985 777653
No 318
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=83.65 E-value=39 Score=34.79 Aligned_cols=141 Identities=7% Similarity=-0.029 Sum_probs=79.6
Q ss_pred hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc--cCC-CC-CCCHHHHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PED-AG-RSDRKFLY 237 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~--~ed-as-r~d~~~l~ 237 (442)
.+|.-..++.+..+|++.|....+.+=....+-++-+..+.++.+.+ .. .+.....+. ..- +. ..+.+-+.
T Consensus 29 ~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~---~~--~~~~l~~l~R~~N~~G~~~~~ddv~~ 103 (464)
T 2nx9_A 29 IDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQ---AM--PNTPLQMLLRGQNLLGYRHYADDVVD 103 (464)
T ss_dssp GGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHH---HC--SSSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHH---hC--CCCeEEEEeccccccCcccccchhhH
Confidence 33333334555667999998865543111111124444444444332 11 233222232 111 11 22334456
Q ss_pred HHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec----CCcchHHHHHHHHHHhCCCEEEe
Q 013498 238 EILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ----NDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~H----NDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..++.+.++|++.|++.|.+--. ..+.+.|+.+++.-. .+...+|+= .|....+.-+-++.++||+.|..
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~---~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l 177 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGA---HAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIAL 177 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTC---EEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCC---EEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 78889999999999999876444 678888888887521 233344331 14556667777888999998744
No 319
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=83.64 E-value=3.7 Score=38.04 Aligned_cols=200 Identities=13% Similarity=0.056 Sum_probs=104.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCC----ChhHHHHHHHHHHHhcccccccCCccceEee---eccc------chhh
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAA----SKEDFEAVRTIAKEVGNAVDAESGYVPVICG---LSRC------NERD 164 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~----~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~---~~r~------~~~d 164 (442)
++.++. ++.+.++|++.||+..+.. .+.+.+.++.+.+..+-.+ ..+.. |... ..+.
T Consensus 16 ~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~-------~~~~~~~~~~~~~~~~~~~~~~ 85 (281)
T 3u0h_A 16 TSLVLY---LDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVL-------ANLGLPLNLYDSEPVFLRELSL 85 (281)
T ss_dssp CCHHHH---HHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEE-------CCEECCSCTTSCHHHHHHHHHT
T ss_pred CCHHHH---HHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCce-------EEecccccccCCCHHHHHHHHH
Confidence 455554 5566778999999965321 1223445555444322111 11111 1110 0123
Q ss_pred HHHHHHHHHhCCCCEEEEee-cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC---------CCCCCHH
Q 013498 165 IKTAWEAVKYAKRPRIHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED---------AGRSDRK 234 (442)
Q Consensus 165 I~~a~e~l~~~g~~~v~i~~-~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed---------asr~d~~ 234 (442)
++++++.....|.+.|.+.+ +.++.... ...+..++.+.+++++|++.|+. +.+-... ..-.+++
T Consensus 86 ~~~~i~~A~~lG~~~v~~~~~p~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3u0h_A 86 LPDRARLCARLGARSVTAFLWPSMDEEPV----RYISQLARRIRQVAVELLPLGMR-VGLEYVGPHHLRHRRYPFVQSLA 160 (281)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSEESSCHH----HHHHHHHHHHHHHHHHHGGGTCE-EEEECCCCGGGCCSSEECCCSHH
T ss_pred HHHHHHHHHHcCCCEEEEeecCCCCCcch----hhHHHHHHHHHHHHHHHHHcCCE-EEEEeccccccccccccccCCHH
Confidence 45566666778999887532 22110000 12345677788888999999974 5553322 0134667
Q ss_pred HHHHHHHHHHHcCCcEEecc-Ccccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE
Q 013498 235 FLYEILGEVIKVGATTLNIP-DTVGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ 309 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~la-DT~G~----~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~ 309 (442)
.+.++++.+ +.+.+.++ ||.=. ..|.+ + ++ .+. +-...+|.+|..+.. .+.
T Consensus 161 ~~~~l~~~v---~~~~vg~~~D~~h~~~~g~~~~~---~---~~-~~~---~~i~~vHl~D~~~~~---------~~~-- 216 (281)
T 3u0h_A 161 DLKTFWEAI---GAPNVGALVDSYHWYTAGEHEDD---L---AQ-LPP---EKVVYVHINDTRDAP---------EDA-- 216 (281)
T ss_dssp HHHHHHHHH---CCTTEEEEEEHHHHHHTTCCHHH---H---HT-SCG---GGEEEEEECBCSSCT---------TTC--
T ss_pred HHHHHHHHc---CCCCeeEEeehhHHHHcCCCHHH---H---Hh-cCc---ccEEEEEecCCCCCc---------ccc--
Confidence 777776655 43333332 54311 22322 2 22 232 245789999987632 010
Q ss_pred EEecccccccccCcccHHHHHHHHHhccc
Q 013498 310 VEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 310 vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
.+..-.-+|+ |..+..+++..|+..|.
T Consensus 217 ~~~~~~~~G~--G~id~~~~~~~L~~~gy 243 (281)
T 3u0h_A 217 HDGKRLLPGD--GRIPLVPFLRGLYLAGY 243 (281)
T ss_dssp CTTSCBCTTS--SSSCHHHHHHHHHHHTC
T ss_pred hhccCcCCCC--cCcCHHHHHHHHHHcCC
Confidence 0001122444 89999999999998764
No 320
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=83.55 E-value=7 Score=38.63 Aligned_cols=81 Identities=11% Similarity=0.124 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHcCCcEEecc-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeecCC-
Q 013498 235 FLYEILGEVIKVGATTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQND- 291 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~la-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~H~HND- 291 (442)
.+.+.++.+.++|.|.|-|- |-.|... +..+.++|+.+++.++. +.+|++-..-+
T Consensus 153 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~--d~pV~vRls~~~ 230 (349)
T 3hgj_A 153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPR--ELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCT--TSCEEEEEESCC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcC--CceEEEEecccc
Confidence 44455566778899977663 3334332 23357888999999864 35566644421
Q ss_pred ---cch----HHHHHHHHHHhCCCEEEeccccc
Q 013498 292 ---LGL----STANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 292 ---lGL----A~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
-|+ ++.-+-..-++|+++|+.+..+.
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 263 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGV 263 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCc
Confidence 133 22233344567999999987554
No 321
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=83.46 E-value=10 Score=36.46 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCCCC-CCHHHHHHHHHHHHHc-CCcE--EeccCcccc-cCHHHHHHH
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVIKV-GATT--LNIPDTVGI-TMPTEFGKL 268 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~edasr-~d~~~l~~~~~~~~~~-Gad~--I~laDT~G~-~~P~~v~~l 268 (442)
+.+.+.++.|.+.|.+.+.+.++.-.+ .+.+.+.+..+.+.++ +... -+++..+|. +.|+.+.+|
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 445667888888998767666666666 6888888888887765 3332 235556676 566666666
No 322
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=83.44 E-value=12 Score=36.83 Aligned_cols=124 Identities=15% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccC--CCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPE--DAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKA 274 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e--dasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~ 274 (442)
++.+++++. ++.+++.|+..|.|+.- +....+.+++.++++.+.+.|... .+ |.|.++++.+..|.+.
T Consensus 99 ~s~eei~~~----~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i-~~--t~G~l~~e~l~~L~~a--- 168 (369)
T 1r30_A 99 MEVEQVLES----ARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEA-CM--TLGTLSESQAQRLANA--- 168 (369)
T ss_dssp CCHHHHHHH----HHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEE-EE--ECSSCCHHHHHHHHHH---
T ss_pred CCHHHHHHH----HHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeE-EE--ecCCCCHHHHHHHHHC---
Confidence 466666554 44556678877777431 233467899999999999988763 43 8999888766655433
Q ss_pred hCCCCcceeEEEee----------cCCcchHHHHHHHHHHhCCCEEEec-ccccccccCcccHHHHHHHHHhc
Q 013498 275 NTPGIENVVISTHC----------QNDLGLSTANTIAGACAGARQVEVT-INGIGERAGNASLEEVVMAFKCR 336 (442)
Q Consensus 275 ~~p~~~~v~i~~H~----------HNDlGLA~ANalaAl~aGa~~vd~T-v~GlGeraGNa~lEevv~~L~~~ 336 (442)
-+. .+.+++.. ..++.-.+.+.-.+.++|.. |.++ +.|+|+ -...+++++..+...
T Consensus 169 Gvd---~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~-v~~~~I~Gl~e--t~ed~~~~l~~l~~l 235 (369)
T 1r30_A 169 GLD---YYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIK-VCSGGIVGLGE--TVKDRAGLLLQLANL 235 (369)
T ss_dssp CCC---EEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCE-EECCEEECSSC--CHHHHHHHHHHHHSS
T ss_pred CCC---EEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCe-eeeeeEeeCCC--CHHHHHHHHHHHHhh
Confidence 021 23344333 12334445555566677884 4433 556654 122344444455444
No 323
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=83.26 E-value=17 Score=33.40 Aligned_cols=81 Identities=14% Similarity=0.018 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeec-CCcchHHHHHHHHHHhCCC
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQ-NDLGLSTANTIAGACAGAR 308 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~H-NDlGLA~ANalaAl~aGa~ 308 (442)
.+.....++.+.+.|+|.|-+.=-.|. ..+..+.+.++.+++..++. -+.+.+..- -+..-...-+..+.++||+
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv-~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSA-VHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTS-EEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCc-eEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 344445567888899998875333344 36778888899999887522 133322221 1222244557788899999
Q ss_pred EEEecc
Q 013498 309 QVEVTI 314 (442)
Q Consensus 309 ~vd~Tv 314 (442)
.|.++-
T Consensus 148 ~I~tst 153 (225)
T 1mzh_A 148 FIKTST 153 (225)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 996655
No 324
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=83.20 E-value=5.9 Score=39.68 Aligned_cols=135 Identities=10% Similarity=0.013 Sum_probs=76.8
Q ss_pred HHHHHHhCCCCEEEEeecCC--------hH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCCC-----C
Q 013498 168 AWEAVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----G 229 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~S--------d~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~eda-----s 229 (442)
+.+..+++|.+.|.+..+.. +. +....+|-+.+.-.+.+.+.++.+|+. |. . .|.+++.+. .
T Consensus 172 AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~ 251 (376)
T 1icp_A 172 AARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGD 251 (376)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCC
T ss_pred HHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 33345668999999876531 21 112334556666667777777777764 32 1 356665432 2
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEeccCcc-cccCHH-HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-
Q 013498 230 RSDRKFLYEILGEVIKVGATTLNIPDTV-GITMPT-EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG- 306 (442)
Q Consensus 230 r~d~~~l~~~~~~~~~~Gad~I~laDT~-G~~~P~-~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG- 306 (442)
..+.+...++++.+.++|++.|.+..-. ....|. ...++++.+++.++ ++|..=. ++ -...+..+++.|
T Consensus 252 ~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~----iPvi~~G--~i--~~~~a~~~l~~g~ 323 (376)
T 1icp_A 252 TNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYK----GTFIVAG--GY--DREDGNRALIEDR 323 (376)
T ss_dssp SCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCC----SCEEEES--SC--CHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcC----CCEEEeC--CC--CHHHHHHHHHCCC
Confidence 3456778899999999999999885311 001121 11245667777764 3443322 12 135566777776
Q ss_pred CCEE
Q 013498 307 ARQV 310 (442)
Q Consensus 307 a~~v 310 (442)
||.|
T Consensus 324 aD~V 327 (376)
T 1icp_A 324 ADLV 327 (376)
T ss_dssp CSEE
T ss_pred CcEE
Confidence 6665
No 325
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=83.10 E-value=21 Score=33.63 Aligned_cols=191 Identities=13% Similarity=0.056 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChH-----HHH------HHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEEccCCCC
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGI-----HME------HKLRKTKQQVVEIARSMVKFARSLG--CDDVEFSPEDAG 229 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~-----h~~------~~l~~s~~e~l~~~~~~v~~ar~~G--~~~V~f~~edas 229 (442)
+.....++.+..+|++.|++=+|.||. .++ .+-|.+.+. ..+.++.+|+.+ .. |.+- +
T Consensus 31 ~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~----~~~~v~~ir~~~~~~P-v~lm----~ 101 (268)
T 1qop_A 31 EQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQ----CFEMLAIIREKHPTIP-IGLL----M 101 (268)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHH----HHHHHHHHHHHCSSSC-EEEE----E
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHH----HHHHHHHHHhcCCCCC-EEEE----E
Confidence 444444566677899999998877753 121 123444333 345666667663 33 3321 1
Q ss_pred CCCHHH---HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC
Q 013498 230 RSDRKF---LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG 306 (442)
Q Consensus 230 r~d~~~---l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG 306 (442)
..++-+ +.+.++.+.++|+|.+.+.|-. +++..+++..++++-- +. +.+-.+++. ....-.++....|
T Consensus 102 y~n~v~~~g~~~~~~~~~~aGadgii~~d~~----~e~~~~~~~~~~~~g~--~~--i~l~~p~t~-~~~i~~i~~~~~g 172 (268)
T 1qop_A 102 YANLVFNNGIDAFYARCEQVGVDSVLVADVP----VEESAPFRQAALRHNI--AP--IFICPPNAD-DDLLRQVASYGRG 172 (268)
T ss_dssp CHHHHHTTCHHHHHHHHHHHTCCEEEETTCC----GGGCHHHHHHHHHTTC--EE--ECEECTTCC-HHHHHHHHHHCCS
T ss_pred cccHHHHhhHHHHHHHHHHcCCCEEEEcCCC----HHHHHHHHHHHHHcCC--cE--EEEECCCCC-HHHHHHHHhhCCC
Confidence 112211 1577888889999999998765 4678888888887621 11 222233221 1222333344445
Q ss_pred CCEEEeccccccc-ccCc-ccHHHHHHHHHhccccccCCccCCCC-hhHHHHHHHHHHHHhCCCCCCCCccccchhhhh
Q 013498 307 ARQVEVTINGIGE-RAGN-ASLEEVVMAFKCRGEHILGGLYTGIN-TRHIVMASKMVEEYTGLHVQPHKAIVGANAFAH 382 (442)
Q Consensus 307 a~~vd~Tv~GlGe-raGN-a~lEevv~~L~~~g~~~~~G~~tgid-l~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~h 382 (442)
.-++ .|+.|.++ +.+. .++.+.+..++.... ....+.-||+ .+.+.++. . -..+--+||...+.+
T Consensus 173 ~v~~-~s~~G~tG~~~~~~~~~~~~i~~lr~~~~-~pi~vggGI~t~e~~~~~~---~------agAD~vVVGSai~~~ 240 (268)
T 1qop_A 173 YTYL-LSRSGVTGAENRGALPLHHLIEKLKEYHA-APALQGFGISSPEQVSAAV---R------AGAAGAISGSAIVKI 240 (268)
T ss_dssp CEEE-ESSSSCCCSSSCC--CCHHHHHHHHHTTC-CCEEEESSCCSHHHHHHHH---H------TTCSEEEECHHHHHH
T ss_pred cEEE-EecCCcCCCccCCCchHHHHHHHHHhccC-CcEEEECCCCCHHHHHHHH---H------cCCCEEEEChHHhhh
Confidence 4333 37777654 3332 234566666665421 1113456776 66665521 1 123455777666654
No 326
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=82.99 E-value=5.9 Score=38.41 Aligned_cols=141 Identities=14% Similarity=0.145 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHH
Q 013498 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIAR 207 (442)
Q Consensus 129 d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~ 207 (442)
.++.++++++. + .|++.--+. .+.+++..|++.+...|-+.+.+.-..+.. .+.. ..-.+.
T Consensus 121 n~~Ll~~~a~~-~---------kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~----~y~~-~~~dl~--- 182 (292)
T 1o60_A 121 QTDLVEAMAKT-G---------AVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF----GYDN-LIVDML--- 182 (292)
T ss_dssp CHHHHHHHHHT-T---------CEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC----STTC-EECCTT---
T ss_pred CHHHHHHHHcC-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCc-cccCHH---
Confidence 35677877753 1 244544444 378899999999888888777776544321 1110 000011
Q ss_pred HHHHHHHHc--CCCeEEEccCCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ccCcccccCHHHH
Q 013498 208 SMVKFARSL--GCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTEF 265 (442)
Q Consensus 208 ~~v~~ar~~--G~~~V~f~~eda----------sr~d~~~l~~~~~~~~~~Gad~I~----------laDT~G~~~P~~v 265 (442)
.+...|+. |+. |.|.+--+ +.-.++++..++.++...||+.+. ++|-.=.+.|+++
T Consensus 183 -~i~~lk~~~~~~p-V~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l 260 (292)
T 1o60_A 183 -GFSVMKKASKGSP-VIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPNPNQAKCDGPSALPLSAL 260 (292)
T ss_dssp -HHHHHHHHTTSCC-EEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESSGGGCSSCCTTCEEGGGH
T ss_pred -HHHHHHhhCCCCC-EEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCCcccCCchhhcCCCHHHH
Confidence 22234555 675 77743111 012234677888888899998322 3699999999999
Q ss_pred HHHHHHHHHh------CCCCcceeEEEeecC
Q 013498 266 GKLIADIKAN------TPGIENVVISTHCQN 290 (442)
Q Consensus 266 ~~li~~l~~~------~p~~~~v~i~~H~HN 290 (442)
.++++.+++. .+.. +..|+-|-|.
T Consensus 261 ~~lv~~ir~i~~a~g~~~~~-~~~~~~~~~~ 290 (292)
T 1o60_A 261 EGFVSQMKAIDDLVKSFPEL-DTSIGSHHHH 290 (292)
T ss_dssp HHHHHHHHHHHHHHHHSCCC-CC--------
T ss_pred HHHHHHHHHHHHHhCCchhc-cccccccccc
Confidence 9999988742 2333 2556766653
No 327
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=82.96 E-value=13 Score=35.80 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHH
Q 013498 197 KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIA 270 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~ 270 (442)
++.+++++. ++.+++.|...|.|+.-...-.+.+++.++++.+.+.+. .+.=+.|.++++.+..+.+
T Consensus 84 ls~eei~~~----i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~---~i~~s~g~l~~e~l~~L~~ 150 (348)
T 3iix_A 84 MTPEEIVER----ARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGV---AVTLSLGEWPREYYEKWKE 150 (348)
T ss_dssp CCHHHHHHH----HHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSC---EEEEECCCCCHHHHHHHHH
T ss_pred CCHHHHHHH----HHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCc---eEEEecCCCCHHHHHHHHH
Confidence 465555544 444556777666664211122334677788877776642 2222566676665554433
No 328
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=82.87 E-value=28 Score=31.80 Aligned_cols=199 Identities=12% Similarity=0.014 Sum_probs=107.2
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.|-.+....+-+.+.+.|++.+-.........+.+.++.+.... ++ + |... .......+..++.+...|
T Consensus 18 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~---vd---g----iIi~-~~~~~~~~~~~~~~~~~~ 86 (291)
T 3l49_A 18 DWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQK---PD---A----IIEQ-LGNLDVLNPWLQKINDAG 86 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHC---CS---E----EEEE-SSCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcC---CC---E----EEEe-CCChhhhHHHHHHHHHCC
Confidence 34456677788888999998766533322223345666655531 11 1 2211 123233344455555678
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH--cCCCeEEEcc-CCCCCCCHHHHHHHHHHHHHc-CCcEEe
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS--LGCDDVEFSP-EDAGRSDRKFLYEILGEVIKV-GATTLN 252 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~--~G~~~V~f~~-edasr~d~~~l~~~~~~~~~~-Gad~I~ 252 (442)
++.|.+-....+ . ......+. .+....+++++.+ .|...|.|-. ........+.+.-+.+.+.+. |...+.
T Consensus 87 iPvV~~~~~~~~-~-~~~V~~D~---~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~ 161 (291)
T 3l49_A 87 IPLFTVDTATPH-A-INNTTSNN---YSIGAELALQMVADLGGKGNVLVFNGFYSVPVCKIRYDQMKYVLEAFPDVKIIE 161 (291)
T ss_dssp CCEEEESCCCTT-C-SEEEEECH---HHHHHHHHHHHHHHHTTCEEEEEECSCTTSHHHHHHHHHHHHHHHTCTTEEECS
T ss_pred CcEEEecCCCCC-c-CceEecCh---HHHHHHHHHHHHHHcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHCCCCEEEe
Confidence 887765332221 0 00112222 3445667788888 7876565532 111222234555566666666 333221
Q ss_pred cc-CcccccCHHHHHHHHHHHHHhCC---CCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 253 IP-DTVGITMPTEFGKLIADIKANTP---GIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 253 la-DT~G~~~P~~v~~li~~l~~~~p---~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
-. -..+-..++..++.+..+.+..| ++. .+=|.|| .+|++-.-+.-++|.+ |.+|.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----ai~~~~d-~~a~g~~~al~~~g~~--di~vvg~d 224 (291)
T 3l49_A 162 PELRDVIPNTIQSAYSNVTDMLTKYPNEGDVG----AIWACWD-VPMIGATQALQAAGRT--DIRTYGVD 224 (291)
T ss_dssp SCBCCCSSSHHHHHHHHHHHHHHHCCSTTSCC----EEEESSH-HHHHHHHHHHHHTTCC--SCEEEEEE
T ss_pred eeccCCCCCCHHHHHHHHHHHHHhCCCcCCcC----EEEECCC-chHHHHHHHHHHcCCC--CeEEEEec
Confidence 10 01233467788888888877766 432 3346665 3555555566688988 99999886
No 329
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=82.84 E-value=8.8 Score=37.81 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=83.1
Q ss_pred HHHHHHHHHh-HcCCCEEEEcc----CCC---Chh-HHHHHHHHHHHhcccccccCCccceEeee--c--ccchhhHHHH
Q 013498 102 EKLDIARQLA-KLGVDIIEAGF----PAA---SKE-DFEAVRTIAKEVGNAVDAESGYVPVICGL--S--RCNERDIKTA 168 (442)
Q Consensus 102 ~kl~ia~~L~-~~GV~~IEvG~----p~~---~~~-d~e~v~~l~~~~~~~~~~~~~l~~~i~~~--~--r~~~~dI~~a 168 (442)
+..++++.+. +.|.|+|.+|. |.. +++ ..+.++.+.+... +| |+.. + -.+.+-++.+
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~---------vP-lsIDg~~~~T~~~eV~eaA 150 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVG---------VP-LVVVGCGDVEKDHEVLEAV 150 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCC---------SC-EEEECCSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCC---------ce-EEEECCCCCCCCHHHHHHH
Confidence 4788888888 99999999984 332 222 3446666655421 23 3322 1 1234456667
Q ss_pred HHHHHhCCC-CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 169 WEAVKYAKR-PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 169 ~e~l~~~g~-~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
+++. +|. ..|+ +++. ++..++++.+++.|.. |..... .|.+++.++.+.+.++|
T Consensus 151 leag--ag~~~lIN---sv~~---------------~~~~~m~~laa~~g~~-vVlmh~----~d~~~~~~l~~~a~~~G 205 (323)
T 4djd_D 151 AEAA--AGENLLLG---NAEQ---------------ENYKSLTAACMVHKHN-IIARSP----LDINICKQLNILINEMN 205 (323)
T ss_dssp HHHT--TTSCCEEE---EEBT---------------TBCHHHHHHHHHHTCE-EEEECS----SCHHHHHHHHHHHHTTT
T ss_pred HHhc--CCCCCeEE---ECCc---------------ccHHHHHHHHHHhCCe-EEEEcc----chHHHHHHHHHHHHHcC
Confidence 7762 222 2333 3332 1123566677888885 544322 24789999999999999
Q ss_pred C--cEEeccCccc-c-cCHHHHHHHHHHHHH
Q 013498 248 A--TTLNIPDTVG-I-TMPTEFGKLIADIKA 274 (442)
Q Consensus 248 a--d~I~laDT~G-~-~~P~~v~~li~~l~~ 274 (442)
+ +.|.|==.+| . -..++..++++.++.
T Consensus 206 I~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 206 LPLDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp CCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred CCHHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 9 6677632333 1 367788888888886
No 330
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=82.83 E-value=20 Score=36.54 Aligned_cols=141 Identities=13% Similarity=0.044 Sum_probs=78.3
Q ss_pred hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH-----c-------------CCC--eE
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-----L-------------GCD--DV 221 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~-----~-------------G~~--~V 221 (442)
.+|...+++.+... .+.|.+-+++...-- ..+..+ .+.+..+.+.|+.+.+ . ... .|
T Consensus 198 ~~Dy~~~a~~l~~~-ad~ieiNiScPNt~G-l~~lq~-~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~V 274 (415)
T 3i65_A 198 VDDLKYCINKIGRY-ADYIAINVSSPNTPG-LRDNQE-AGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFV 274 (415)
T ss_dssp HHHHHHHHHHHGGG-CSEEEEECCCCC---------C-CHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEE
T ss_pred HHHHHHHHHHHHhh-CCEEEEECCCCCCCC-cccccC-HHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEE
Confidence 35666666666543 677766655433211 011122 2334444444444421 0 122 24
Q ss_pred EEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccc-----------------cCHHHHHHHHHHHHHhCCCCcceeE
Q 013498 222 EFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGI-----------------TMPTEFGKLIADIKANTPGIENVVI 284 (442)
Q Consensus 222 ~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~-----------------~~P~~v~~li~~l~~~~p~~~~v~i 284 (442)
-+.+ | .+.+.+.++++.+.++|+|.|.+..|.+. ......-++|+.+++.+++ +++|
T Consensus 275 Ki~p-d---~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~--~iPI 348 (415)
T 3i65_A 275 KLAP-D---LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK--QIPI 348 (415)
T ss_dssp EECS-C---CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT--CSCE
T ss_pred EecC-C---CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCC--CCCE
Confidence 4444 2 35567899999999999999999988642 1112345788888887753 2455
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 285 STHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 285 ~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
..=.==.. -..+++++.+||+.|...-
T Consensus 349 Ig~GGI~s---~eDa~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 349 IASGGIFS---GLDALEKIEAGASVCQLYS 375 (415)
T ss_dssp EECSSCCS---HHHHHHHHHHTEEEEEESH
T ss_pred EEECCCCC---HHHHHHHHHcCCCEEEEcH
Confidence 42221111 2467788888998876543
No 331
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=82.62 E-value=33 Score=34.73 Aligned_cols=163 Identities=14% Similarity=0.025 Sum_probs=90.0
Q ss_pred HHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-eEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 169 WEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD-DVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~-~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
++.+...|+|.+.+-. .++ +.+++.+++.+++.|+. .+.|++++.++.+-.-+.+.+..+.+.|
T Consensus 145 i~~L~~~GvDlll~ET-i~~--------------~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~~~ 209 (406)
T 1lt8_A 145 LEVFMKKNVDFLIAEY-FEH--------------VEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAG 209 (406)
T ss_dssp HHHHHHHTCSEEEECC-CSC--------------HHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHHHHTTT
T ss_pred HHHHhhCCCCEEEEcc-cCC--------------HHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHHhhcCC
Confidence 4556667999876542 222 34555667777878876 3567775444444445666777777777
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCC-cceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCc---
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGI-ENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGN--- 323 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~-~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGN--- 323 (442)
++.|.+-= ..-|+.+..+++.+++..... .+++|.++.-. .++ ...| -.+.+....+
T Consensus 210 ~~avGvNC---~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNa-g~~--------~~~~-------~~~~~~~~~~~~~ 270 (406)
T 1lt8_A 210 ASIIGVNC---HFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA-YHT--------PDAN-------KQGFIDLPEFPFG 270 (406)
T ss_dssp CSEEEEES---SSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCS-BCC--------TTCC-------TTCGGGSTTTTTS
T ss_pred CCEEEecC---CCCHHHHHHHHHHHHHhhhhcCCCccEEEecCC-CCC--------CcCC-------cccccCCcccccc
Confidence 66554421 135999999999998753100 02567776542 110 0000 0111110000
Q ss_pred --c------cHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCC
Q 013498 324 --A------SLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGL 366 (442)
Q Consensus 324 --a------~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~ 366 (442)
+ .+.+.+......|-..+ |=-.|..++.|..+++.+....+.
T Consensus 271 ~~p~~~~~~~~~~~a~~w~~~Ga~iI-GGCCGTtPeHI~aia~~l~~~~~~ 320 (406)
T 1lt8_A 271 LEPRVATRWDIQKYAREAYNLGVRYI-GGCCGFEPYHIRAIAEELAPERGF 320 (406)
T ss_dssp CGGGBCCHHHHHHHHHHHHHHTEEEE-CCCTTCCHHHHHHHHHHTHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCeEE-EEecCCCHHHHHHHHHHHhccCCC
Confidence 0 23444433333332222 335678899999999988887654
No 332
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=82.51 E-value=12 Score=36.46 Aligned_cols=202 Identities=15% Similarity=0.116 Sum_probs=114.4
Q ss_pred HHHHHhHcCCCEEEEc---------cCCCCh----hHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHH
Q 013498 106 IARQLAKLGVDIIEAG---------FPAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTA 168 (442)
Q Consensus 106 ia~~L~~~GV~~IEvG---------~p~~~~----~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a 168 (442)
-++.++++|++.|=+| +|...+ +....++.+++... .|.++ |++ +...+.+.
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~---------~pviaD~d~Gyg--~~~~v~~~ 109 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATD---------LPVLVDIDTGFG--GVLNVART 109 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHC---------CCEEEECTTCSS--SHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcC---------CCEEEECCCCCC--CHHHHHHH
Confidence 3677788999999886 343222 22455666665431 13332 343 45566666
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~ 244 (442)
.+.+..+|+..|++-..+.+- |+.-+-=.+.++..++++.+++ .|...+...=.|+. ....+..++-++...
T Consensus 110 v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~----A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKE----VAPSLYIVARTDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHH----HCTTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHH----cCCCeEEEEeeccccccCHHHHHHHHHHHH
Confidence 676777899999998776532 1111111355666666555444 35542222111211 122567888888899
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee--cCCcchHHHHHHHHHHhCCCEEEecccccccccC
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC--QNDLGLSTANTIAGACAGARQVEVTINGIGERAG 322 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~--HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraG 322 (442)
++|||.|.+. |.-.++++.++.+. ++ +|+-+-. .+...+ -+.-.--+.|++.|-..... =|+-
T Consensus 186 eAGAD~i~~e---~~~~~~~~~~i~~~----~~----~P~~~n~~~~g~tp~--~~~~eL~~lGv~~v~~~~~~--~raa 250 (305)
T 3ih1_A 186 KAGADAIFPE---ALQSEEEFRLFNSK----VN----APLLANMTEFGKTPY--YSAEEFANMGFQMVIYPVTS--LRVA 250 (305)
T ss_dssp HHTCSEEEET---TCCSHHHHHHHHHH----SC----SCBEEECCTTSSSCC--CCHHHHHHTTCSEEEECSHH--HHHH
T ss_pred HcCCCEEEEc---CCCCHHHHHHHHHH----cC----CCEEEeecCCCCCCC--CCHHHHHHcCCCEEEEchHH--HHHH
Confidence 9999999884 33455665555544 43 2332211 111111 12344556799998655443 4778
Q ss_pred cccHHHHHHHHHhcc
Q 013498 323 NASLEEVVMAFKCRG 337 (442)
Q Consensus 323 Na~lEevv~~L~~~g 337 (442)
+.++++++..|...|
T Consensus 251 ~~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 251 AKAYENVFTLIKETG 265 (305)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcC
Confidence 888889888887765
No 333
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=82.17 E-value=20 Score=34.72 Aligned_cols=179 Identities=13% Similarity=0.127 Sum_probs=95.7
Q ss_pred CCHHHHHHHHHHHhHc----CCCEEEE-cc---CCCChhHH------HHHHHHHHHhcccccccCCccceEeeecccchh
Q 013498 98 LTSKEKLDIARQLAKL----GVDIIEA-GF---PAASKEDF------EAVRTIAKEVGNAVDAESGYVPVICGLSRCNER 163 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~----GV~~IEv-G~---p~~~~~d~------e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~ 163 (442)
=+.++.+++|+.|.++ |+..+=- +| |..++..| +-++.+.+..... ++ +.++ .-...+
T Consensus 28 e~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~-----Gl-p~~t--ev~d~~ 99 (288)
T 3tml_A 28 ESEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL-----GL-PVLT--DVHSID 99 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH-----CC-CEEE--ECCSGG
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc-----CC-eEEE--EeCCHH
Confidence 3789999999999876 8775532 33 44444321 3344444332110 22 2222 223566
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHH
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEV 243 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~ 243 (442)
+++...+. ++.+.| +..+ ++.. ++++++.+.|.. |.+.- .--.+++++...++.+
T Consensus 100 ~v~~l~~~-----vd~lkI--gA~~--------~~n~-------~LLr~~a~~gkP-VilK~--G~~~t~~e~~~ave~i 154 (288)
T 3tml_A 100 EIEQVASV-----VDVLQT--PAFL--------CRQT-------DFIHACARSGKP-VNIKK--GQFLAPHDMKNVIDKA 154 (288)
T ss_dssp GHHHHHHH-----CSEEEE--CGGG--------TTCH-------HHHHHHHTSSSC-EEEEC--CTTCCTTHHHHHHHHH
T ss_pred HHHHHHHh-----CCEEEE--Cccc--------ccCH-------HHHHHHHccCCc-EEEeC--CCCCCHHHHHHHHHHH
Confidence 67655442 566554 3322 1111 134455678876 77743 1113556667777777
Q ss_pred HHcCC------cEEeccCcccccCHH----HHHHHHHHHHHhCCCCcceeEEE-eecC-------------CcchHHHHH
Q 013498 244 IKVGA------TTLNIPDTVGITMPT----EFGKLIADIKANTPGIENVVIST-HCQN-------------DLGLSTANT 299 (442)
Q Consensus 244 ~~~Ga------d~I~laDT~G~~~P~----~v~~li~~l~~~~p~~~~v~i~~-H~HN-------------DlGLA~ANa 299 (442)
.+.|. +.|.|+.-.=...+. .++ -|..+++ + +++|.+ +.|- +..+-..-+
T Consensus 155 ~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~-~i~~lk~-~----~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a 228 (288)
T 3tml_A 155 RDAAREAGLSEDRFMACERGVSFGYNNLVSDMR-SLAIMRE-T----NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLA 228 (288)
T ss_dssp HHHHHTTTCCSCCEEEEECCEECSSSCEECCHH-HHHHGGG-G----SSCEEEEHHHHTCCCC--------CTTHHHHHH
T ss_pred HHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHH-HHHHHHh-c----CCcEEEcCCcccccCCcccCCCCCchhhHHHHH
Confidence 77776 667777532222122 222 3445665 4 267888 7774 333447778
Q ss_pred HHHHHhCCC--EEEeccc
Q 013498 300 IAGACAGAR--QVEVTIN 315 (442)
Q Consensus 300 laAl~aGa~--~vd~Tv~ 315 (442)
++|+.+||+ .|+.=..
T Consensus 229 ~AAvA~GadGl~iE~H~~ 246 (288)
T 3tml_A 229 RAAVATGVAGLFMETHPN 246 (288)
T ss_dssp HHHHHHCCSEEEEEEESS
T ss_pred HHHHHcCCCEEEEeeccC
Confidence 999999999 7765443
No 334
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=81.90 E-value=9.7 Score=40.71 Aligned_cols=135 Identities=15% Similarity=0.115 Sum_probs=83.7
Q ss_pred HHHHHhCCCCEEEEeecCC--------hH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEccCCC--CCCC
Q 013498 169 WEAVKYAKRPRIHTFIATS--------GI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSD 232 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~S--------d~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~---~V~f~~eda--sr~d 232 (442)
.+..+++|.+.|.+..+.. +. +....+|-+.+.-.+.+.+.++.+|+. |-+ .|.+++.+. ...+
T Consensus 147 A~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~ 226 (671)
T 1ps9_A 147 AQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGT 226 (671)
T ss_dssp HHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCC
T ss_pred HHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCC
Confidence 3344668999998876531 11 112335556676677778888877775 322 245666442 3456
Q ss_pred HHHHHHHHHHHHHcCCcEEecc----Cc----ccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcch-HHHHHHHH
Q 013498 233 RKFLYEILGEVIKVGATTLNIP----DT----VGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGL-STANTIAG 302 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~la----DT----~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGL-A~ANalaA 302 (442)
.+...++++.+.++|+|.|.+. +. .....| ....++++.+++.+. ++|..= -|. -..++..+
T Consensus 227 ~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----iPvi~~----Ggi~~~~~a~~~ 298 (671)
T 1ps9_A 227 FAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS----LPLVTT----NRINDPQVADDI 298 (671)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS----SCEEEC----SSCCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC----ceEEEe----CCCCCHHHHHHH
Confidence 7888899999999999999763 11 011111 123467788888763 455442 232 35677888
Q ss_pred HHhC-CCEEE
Q 013498 303 ACAG-ARQVE 311 (442)
Q Consensus 303 l~aG-a~~vd 311 (442)
++.| ||.|-
T Consensus 299 l~~g~aD~V~ 308 (671)
T 1ps9_A 299 LSRGDADMVS 308 (671)
T ss_dssp HHTTSCSEEE
T ss_pred HHcCCCCEEE
Confidence 8998 88873
No 335
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=81.80 E-value=30 Score=31.68 Aligned_cols=199 Identities=12% Similarity=0.072 Sum_probs=105.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.|-.+....+-+.+.+.|++.+-.-.......+.+.++.+.+.. ++ + |.... ...+++...++.+...|
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~---vd---g----iI~~~-~~~~~~~~~~~~~~~~~ 89 (293)
T 3l6u_A 21 EFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLK---VD---A----IFITT-LDDVYIGSAIEEAKKAG 89 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTT---CS---E----EEEEC-SCTTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcC---CC---E----EEEec-CChHHHHHHHHHHHHcC
Confidence 35556667777888899998765533222222345666655431 11 1 22121 23334334445555568
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH-c-CCC-----eEEE-ccCCCCCCCHHHHHHHHHHHHHc-C
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-L-GCD-----DVEF-SPEDAGRSDRKFLYEILGEVIKV-G 247 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~-~-G~~-----~V~f-~~edasr~d~~~l~~~~~~~~~~-G 247 (442)
++.|.+-....+.........+..+ ....+++++.+ + |.. .|.| +.........+.+.-+.+.+.+. |
T Consensus 90 iPvV~~~~~~~~~~~~~~V~~D~~~---~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g 166 (293)
T 3l6u_A 90 IPVFAIDRMIRSDAVVSSITSNNQM---IGEQLASYIKNELIKQTGRSTGRIVEITGTANVYTTNERHRGFLKGIENEPT 166 (293)
T ss_dssp CCEEEESSCCCCTTCSEEEEECHHH---HHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTT
T ss_pred CCEEEecCCCCCCcceeEEecCHHH---HHHHHHHHHHHHhccCCCCCCceEEEEECCCCCchHHHHHHHHHHHHHhCCC
Confidence 8877653322210000012223333 33445555555 2 443 4544 32222223345566666677777 7
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
...... -.+...++..++.+..+.+..|++. .+=|.|| .+|+.-.-++-++|.+ |.+|.|++
T Consensus 167 ~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d-~~a~g~~~al~~~g~~--di~vig~d 228 (293)
T 3l6u_A 167 LSIVDS--VSGNYDPVTSERVMRQVIDSGIPFD----AVYCHND-DIAMGVLEALKKAKIS--GKIVVGID 228 (293)
T ss_dssp EEEEEE--EECTTCHHHHHHHHHHHHHTTCCCS----EEEESSH-HHHHHHHHHHHHTTCC--CCEEEEEE
T ss_pred cEEeee--ccCCCCHHHHHHHHHHHHHhCCCCC----EEEECCc-hHHHHHHHHHHhCCCC--CeEEEEec
Confidence 654332 3455678888888888877666532 3445555 4455555555678988 99999986
No 336
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=81.67 E-value=24 Score=35.62 Aligned_cols=133 Identities=13% Similarity=0.070 Sum_probs=79.6
Q ss_pred HHHHhCCCCEEEEeecC--------ChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC-C-eEEEccCCC-----CCC
Q 013498 170 EAVKYAKRPRIHTFIAT--------SGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GC-D-DVEFSPEDA-----GRS 231 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~--------Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~-~-~V~f~~eda-----sr~ 231 (442)
+..+++|.|.|.+..+- |+. +....+|-+.+.-.+.+.+.|+.+|+. |- . .|.+++.+. ...
T Consensus 178 ~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~ 257 (402)
T 2hsa_B 178 LNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSN 257 (402)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSC
T ss_pred HHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Confidence 34466899999987653 222 222345666776667777777777764 31 1 356666421 223
Q ss_pred CHHHHHHHHHHHHHcC------CcEEeccCcc--c-ccC-------HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH
Q 013498 232 DRKFLYEILGEVIKVG------ATTLNIPDTV--G-ITM-------PTEFGKLIADIKANTPGIENVVISTHCQNDLGLS 295 (442)
Q Consensus 232 d~~~l~~~~~~~~~~G------ad~I~laDT~--G-~~~-------P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA 295 (442)
+.+...++++.+.++| ++.|.+..-. + ... +..-.++++.+++.++ ++|..= .+. -
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~----iPvi~~--G~i--~ 329 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQ----GTFICS--GGY--T 329 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCS----SCEEEE--SSC--C
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCC----CCEEEe--CCC--C
Confidence 4677889999999999 9988884311 0 001 2123567788888874 344322 122 2
Q ss_pred HHHHHHHHHhC-CCEE
Q 013498 296 TANTIAGACAG-ARQV 310 (442)
Q Consensus 296 ~ANalaAl~aG-a~~v 310 (442)
...+..+++.| ||.|
T Consensus 330 ~~~a~~~l~~g~aD~V 345 (402)
T 2hsa_B 330 RELGIEAVAQGDADLV 345 (402)
T ss_dssp HHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHCCCCcee
Confidence 35566777776 7766
No 337
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=81.64 E-value=9.3 Score=36.28 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=61.8
Q ss_pred HHHHHHHhCCCCEEEEeecCChH-------H----HHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHH
Q 013498 167 TAWEAVKYAKRPRIHTFIATSGI-------H----MEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 167 ~a~e~l~~~g~~~v~i~~~~Sd~-------h----~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~ 235 (442)
..++++.++|+|.|.+=+|-||. + .--+-|++.+.+++. ++..|+. .+ +.+ .+..++-+
T Consensus 32 ~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~----~~~~r~~-~P-ivl----m~Y~N~i~ 101 (252)
T 3tha_A 32 AFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFEL----LARIKTK-KA-LVF----MVYYNLIF 101 (252)
T ss_dssp HHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHH----HHHCCCS-SE-EEE----ECCHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHH----HHHHhcC-CC-EEE----EeccCHHH
Confidence 34555667899999888888872 1 112236676666553 4444443 33 322 12333321
Q ss_pred ---HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHh
Q 013498 236 ---LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 236 ---l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~ 275 (442)
+.++++.+.++|+|.+.++| +.|++..++.+.++++
T Consensus 102 ~~G~e~F~~~~~~aGvdG~IipD----LP~eE~~~~~~~~~~~ 140 (252)
T 3tha_A 102 SYGLEKFVKKAKSLGICALIVPE----LSFEESDDLIKECERY 140 (252)
T ss_dssp HHCHHHHHHHHHHTTEEEEECTT----CCGGGCHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHHHHHc
Confidence 46788999999999999999 6788888888877775
No 338
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=81.60 E-value=8.1 Score=38.47 Aligned_cols=81 Identities=7% Similarity=-0.027 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHcCCcEEec-------------------cCcccccC---HHHHHHHHHHHHHhCCCCcceeEEE--eec
Q 013498 234 KFLYEILGEVIKVGATTLNI-------------------PDTVGITM---PTEFGKLIADIKANTPGIENVVIST--HCQ 289 (442)
Q Consensus 234 ~~l~~~~~~~~~~Gad~I~l-------------------aDT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~--H~H 289 (442)
+.+.+.++.+.++|.|.|-| .|-.|... +..+.++++.+++.++. + +|++ ..+
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~--~-pv~vris~~ 237 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGA--E-RVGVRLAPL 237 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCG--G-GEEEEECSS
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCC--C-cEEEEEccc
Confidence 45667777788999999887 33344432 33467888999998863 2 4555 332
Q ss_pred CC-----cch----HHHHHHHHHHhCCCEEEeccccc
Q 013498 290 ND-----LGL----STANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 290 ND-----lGL----A~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
+. -|. +..-+.++.++|+++|+++-..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~ 274 (365)
T 2gou_A 238 TTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW 274 (365)
T ss_dssp CCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 21 122 23334556678999999986433
No 339
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=81.58 E-value=24 Score=33.72 Aligned_cols=121 Identities=21% Similarity=0.206 Sum_probs=75.0
Q ss_pred HHHHHHHHHHcCCCe-EEEccCCCCCCCHHHHHHHHHHHHHcCCcEEecc----Ccc---------------cccCHHHH
Q 013498 206 ARSMVKFARSLGCDD-VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP----DTV---------------GITMPTEF 265 (442)
Q Consensus 206 ~~~~v~~ar~~G~~~-V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~la----DT~---------------G~~~P~~v 265 (442)
+.+..+.+|+.|-.. |.|- -++.-+.+...++++.+.+.|+|.|-|. |-+ .-.+...+
T Consensus 7 i~~~f~~~~~~~~~ali~yi--~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~ 84 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFV--TIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDIC 84 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEE--ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEE--eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHH
Confidence 445566667776432 3332 3567788999999999999999965543 322 12445567
Q ss_pred HHHHHHHHHhCCCCcceeEEEeecCC--cchHHHH-HHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhcc
Q 013498 266 GKLIADIKANTPGIENVVISTHCQND--LGLSTAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 266 ~~li~~l~~~~p~~~~v~i~~H~HND--lGLA~AN-alaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
-++++.+|+..++ +|+.+-+.-| +..++.+ +-.+.++|++.+=..=..+.| .+++...++..|
T Consensus 85 ~~~v~~~r~~~~~---~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee------~~~~~~~~~~~g 150 (271)
T 3nav_A 85 FELIAQIRARNPE---TPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNE------SQPFVAAAEKFG 150 (271)
T ss_dssp HHHHHHHHHHCTT---SCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGG------CHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCC---CCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHH------HHHHHHHHHHcC
Confidence 7899999987543 6677755433 2233343 557789999997554444433 344555555543
No 340
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=81.55 E-value=4 Score=41.77 Aligned_cols=84 Identities=11% Similarity=0.133 Sum_probs=56.7
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC-CCCCHHHHHHHHHHHHHc
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA-GRSDRKFLYEILGEVIKV 246 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda-sr~d~~~l~~~~~~~~~~ 246 (442)
.++.++.+|+.+|.+-+-..+-.....+++. ...+.+.++++.+++.|+..|.+.+..+ ..-+.+.+.+.++.+.+.
T Consensus 155 ~l~~L~~~G~~rislGvQS~~~~~l~~i~R~--~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l 232 (457)
T 1olt_A 155 VLDHLRAEGFNRLSMGVQDFNKEVQRLVNRE--QDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAEL 232 (457)
T ss_dssp HHHHHHHTTCCEEEEEEECCCHHHHHHHTCC--CCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccCCHHHHHHhCCC--CCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 3556667899999886655544555667653 2246677889999999985233322211 123578888999999999
Q ss_pred CCcEEec
Q 013498 247 GATTLNI 253 (442)
Q Consensus 247 Gad~I~l 253 (442)
+++.|.+
T Consensus 233 ~~~~i~~ 239 (457)
T 1olt_A 233 NPDRLSV 239 (457)
T ss_dssp CCSEEEE
T ss_pred CcCEEEe
Confidence 9997765
No 341
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=81.53 E-value=11 Score=36.59 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=114.5
Q ss_pred HHHHhHcCCCEEEEcc----------CCCC----hhHHHHHHHHHHHhcccccccCCccceEee----ecccchhhHHHH
Q 013498 107 ARQLAKLGVDIIEAGF----------PAAS----KEDFEAVRTIAKEVGNAVDAESGYVPVICG----LSRCNERDIKTA 168 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~----------p~~~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~----~~r~~~~dI~~a 168 (442)
++.++++|++.|=+|. |... .+..+.++.+++... .|.++. |+. +.+.+.+.
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~---------~PviaD~d~Gyg~-~~~~~~~~ 99 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS---------LPLLVDADIGFGS-SAFNVART 99 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC---------SCEEEECTTCSSS-SHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC---------CCEEecCCcccCC-CHHHHHHH
Confidence 6778889999998862 3211 122455666665432 243432 331 44455444
Q ss_pred HHHHHhCCCCEEEEeecCChH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC-CCCHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATSGI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG-RSDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas-r~d~~~l~~~~~~~~ 244 (442)
...+..+|+..|++-..+.+- |+.-+-=.+.++..++++.+++....-++ .|.--. |+. ....+.+.+-++.+.
T Consensus 100 v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~-~i~aRt-da~~~~gl~~ai~ra~ay~ 177 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDF-VIMART-DALAVEGLDAAIERAQAYV 177 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTS-EEEEEE-CCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCc-EEEEec-HHhhhcCHHHHHHHHHHHH
Confidence 444556799999998776421 11100003556666766666554432233 122111 111 112367888888999
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcc
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa 324 (442)
++|||.|.+. |.-.++++.++.+.+. .| +..-.-..+.... -+.-.--+.|++.|-....++ |+-+.
T Consensus 178 eAGAd~i~~e---~~~~~~~~~~i~~~~~--iP----~~~N~~~~g~~p~--~~~~eL~~~G~~~v~~~~~~~--~aa~~ 244 (295)
T 1xg4_A 178 EAGAEMLFPE---AITELAMYRQFADAVQ--VP----ILANITEFGATPL--FTTDELRSAHVAMALYPLSAF--RAMNR 244 (295)
T ss_dssp HTTCSEEEET---TCCSHHHHHHHHHHHC--SC----BEEECCSSSSSCC--CCHHHHHHTTCSEEEESSHHH--HHHHH
T ss_pred HcCCCEEEEe---CCCCHHHHHHHHHHcC--CC----EEEEecccCCCCC--CCHHHHHHcCCCEEEEChHHH--HHHHH
Confidence 9999999986 3445677777666653 33 2111111111111 122345567999986655543 77888
Q ss_pred cHHHHHHHHHhcc
Q 013498 325 SLEEVVMAFKCRG 337 (442)
Q Consensus 325 ~lEevv~~L~~~g 337 (442)
++++++..|...|
T Consensus 245 a~~~~~~~i~~~g 257 (295)
T 1xg4_A 245 AAEHVYNVLRQEG 257 (295)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 8888888888765
No 342
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=81.42 E-value=43 Score=32.96 Aligned_cols=165 Identities=12% Similarity=0.066 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++..+-++.+.+.|++.+-+=......+|.+.++.+++.++... ...+=+....+.++..+..+.+...++.
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~g~~~------~l~vDaN~~~~~~~A~~~~~~l~~~~i~ 213 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAAGDSI------TLRIDANQGWSVETAIETLTLLEPYNIQ 213 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCSSS------EEEEECTTCBCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHhCCCC------eEEEECCCCCChHHHHHHHHHHhhcCCC
Confidence 6788888888888999998776322223567889999988875421 1112222233445544455666666777
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEeccCcc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDTV 257 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~laDT~ 257 (442)
.|.=.++..+ ++ .+.+..+..++. |.. |.+-.++..+.+ +.+.| +|.|.+ |..
T Consensus 214 ~iEqP~~~~~--------------~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~----~~~~~~~d~v~~-k~~ 267 (368)
T 3q45_A 214 HCEEPVSRNL--------------YT---ALPKIRQACRIP-IMA---DESCCNSFDAER----LIQIQACDSFNL-KLS 267 (368)
T ss_dssp CEECCBCGGG--------------GG---GHHHHHHTCSSC-EEE---STTCCSHHHHHH----HHHTTCCSEEEE-CTT
T ss_pred EEECCCChhH--------------HH---HHHHHHhhCCCC-EEE---cCCcCCHHHHHH----HHHcCCCCeEEe-chh
Confidence 6653222211 11 222233445654 544 334455554444 34455 565554 555
Q ss_pred cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 258 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 258 G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
=+.-..+..++....++. ++++.+||....+++++.++
T Consensus 268 ~~GGit~~~~i~~~A~~~-----gi~~~~~~~~es~i~~aa~~ 305 (368)
T 3q45_A 268 KSAGITNALNIIRLAEQA-----HMPVQVGGFLESRLGFTAAA 305 (368)
T ss_dssp TTTSHHHHHHHHHHHHHT-----TCCEEECCSSCCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHc-----CCcEEecCccccHHHHHHHH
Confidence 555566667766666654 36788888877777766444
No 343
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.42 E-value=29 Score=30.90 Aligned_cols=91 Identities=13% Similarity=-0.002 Sum_probs=54.7
Q ss_pred HHHHHHHHc--CCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEE
Q 013498 208 SMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIS 285 (442)
Q Consensus 208 ~~v~~ar~~--G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~ 285 (442)
+.++.+|+. +.. +.++... ...++ .+++.+.++|+|.|.+.+..+ ++.+.++++.+++. + +.+.
T Consensus 42 ~~i~~ir~~~~~~~-i~~~~~~--~~~~~---~~~~~~~~~Gad~v~v~~~~~---~~~~~~~~~~~~~~--g---~~~~ 107 (211)
T 3f4w_A 42 NAIKAIKEKYPHKE-VLADAKI--MDGGH---FESQLLFDAGADYVTVLGVTD---VLTIQSCIRAAKEA--G---KQVV 107 (211)
T ss_dssp HHHHHHHHHCTTSE-EEEEEEE--CSCHH---HHHHHHHHTTCSEEEEETTSC---HHHHHHHHHHHHHH--T---CEEE
T ss_pred HHHHHHHHhCCCCE-EEEEEEe--ccchH---HHHHHHHhcCCCEEEEeCCCC---hhHHHHHHHHHHHc--C---CeEE
Confidence 456666665 442 5444321 11223 247888899999999987753 46667888888875 2 3344
Q ss_pred EeecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 286 THCQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 286 ~H~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
+-+++- .-...-+..+.++|+++|-+.
T Consensus 108 v~~~~~-~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 108 VDMICV-DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp EECTTC-SSHHHHHHHHHHHTCCEEEEE
T ss_pred EEecCC-CCHHHHHHHHHHcCCCEEEEc
Confidence 322221 122345678889999998554
No 344
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=81.34 E-value=8.4 Score=38.20 Aligned_cols=99 Identities=17% Similarity=0.278 Sum_probs=66.1
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cc-hhhHHHHHHHHHh
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CN-ERDIKTAWEAVKY 174 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~-~~dI~~a~e~l~~ 174 (442)
.++.++-+++++.|.+.|++.||--+| +++++..+.+.+... +| |++=.+ .. ..+++..++.
T Consensus 210 ~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iP-Ia~dE~~~~~~~~~~~~i~~--- 273 (382)
T 1rvk_A 210 WYSRTDALALGRGLEKLGFDWIEEPMD---EQSLSSYKWLSDNLD---------IP-VVGPESAAGKHWHRAEWIKA--- 273 (382)
T ss_dssp TCCHHHHHHHHHHHHTTTCSEEECCSC---TTCHHHHHHHHHHCS---------SC-EEECSSCSSHHHHHHHHHHT---
T ss_pred CCCHHHHHHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhhCC---------CC-EEEeCCccCcHHHHHHHHHc---
Confidence 468899999999999999999997554 467788888877531 23 222222 23 5677766653
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..++.|.+=. + +. .-+..+.+++++|+++|+. +..++
T Consensus 274 ~~~d~v~ik~--~------~~-----GGit~~~~i~~~A~~~g~~-~~~~~ 310 (382)
T 1rvk_A 274 GACDILRTGV--N------DV-----GGITPALKTMHLAEAFGME-CEVHG 310 (382)
T ss_dssp TCCSEEEECH--H------HH-----TSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCCCEEeeCc--h------hc-----CCHHHHHHHHHHHHHcCCe-EeecC
Confidence 3456655411 1 11 1256678899999999996 77763
No 345
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=81.21 E-value=26 Score=32.41 Aligned_cols=202 Identities=9% Similarity=-0.026 Sum_probs=107.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCCh-hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~-~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
.|-.+....+-+.+.+.|++.+-.......+ .+.+.++.+.... ++ + |.... ...+.++..++.+...
T Consensus 17 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~---vd---g----iIi~~-~~~~~~~~~~~~~~~~ 85 (305)
T 3g1w_A 17 DYWKRCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKN---PA---G----IAISA-IDPVELTDTINKAVDA 85 (305)
T ss_dssp THHHHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHC---CS---E----EEECC-SSTTTTHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhC---CC---E----EEEcC-CCHHHHHHHHHHHHHC
Confidence 4556667778888889999887644332333 2345666655531 11 1 21111 2223333344444556
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
|++.|.+-....+.......+.+. .+....+++++.++ |...|.|-.........+.+.-+.+.+.+.|.+.-..
T Consensus 86 ~iPvV~~~~~~~~~~~~~~V~~d~---~~~g~~~~~~l~~~~~g~~~i~~i~~~~~~~~~~R~~gf~~~l~~~~~~~~~~ 162 (305)
T 3g1w_A 86 GIPIVLFDSGAPDSHAHSFLGTNN---YNAGMNAAYKMAELLDGEGEVAVITLPNQLNHQERTTGFKETLEAEFPAIEVI 162 (305)
T ss_dssp TCCEEEESSCCTTSCCSCEEECCH---HHHHHHHHHHHHHHTTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCcEEEECCCCCCCceeEEECcCH---HHHHHHHHHHHHHHhCCCcEEEEEeCCCcccHHHHHHHHHHHHHhhCCCCEEE
Confidence 888776543222100001122333 34456677888888 8765555322222233345555666777777642111
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 254 aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
.--.|-..+...++.+..+.+..|+ +=.+=|.||. +|+.-.-++-++|.+ =|.+|.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~~~----~~ai~~~~d~-~a~g~~~al~~~g~~-~di~vig~d 221 (305)
T 3g1w_A 163 AVEDGRGDSLHSRRVAHQLLEDYPN----LAGIFATEAN-GGVGVGDAVRLESRA-GEIQIISFD 221 (305)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHCTT----EEEEEESSHH-HHHHHHHHHHHTTCT-TTSEEEEES
T ss_pred EEecCCCCHHHHHHHHHHHHHhCCC----ceEEEECCCc-chhhHHHHHHhcCCC-CCeEEEEeC
Confidence 1123456788888888887776664 2345566654 344444455577877 567788775
No 346
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=81.19 E-value=3.4 Score=40.42 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHcCCcEEeccCcc-cccCHHHHH--------HHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHH-HH
Q 013498 235 FLYEILGEVIKVGATTLNIPDTV-GITMPTEFG--------KLIADIKANTPGIENVVISTHCQNDLGLSTANTIAG-AC 304 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~laDT~-G~~~P~~v~--------~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaA-l~ 304 (442)
.+.+.++...++|++.|.+.|+. |.+.|..+. ++++.+++. ++ +++-.||.++ + +.+.. .+
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g---~~~i~~~~g~-~----~~l~~l~~ 250 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SD---TPVIYFFRGS-S----SFIDLAVD 250 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CC---CCEEEEESSH-H----HHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CC---CCEEEEcCCc-H----HHHHHHHH
Confidence 44555666778899999999976 457887764 445566655 43 6788888655 2 23333 35
Q ss_pred hCCCEEEecccccccccCcccHHHHHHHH
Q 013498 305 AGARQVEVTINGIGERAGNASLEEVVMAF 333 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGNa~lEevv~~L 333 (442)
.|++.++.-. ..+++++...+
T Consensus 251 ~g~d~~~~d~--------~~dl~~~~~~~ 271 (338)
T 2eja_A 251 YRADALSVDW--------SVDIPELFKIY 271 (338)
T ss_dssp SCCSEEECCT--------TSCHHHHHHHC
T ss_pred cCCCEEEeCC--------CCCHHHHHHhC
Confidence 6999886532 26777766554
No 347
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=80.92 E-value=34 Score=33.01 Aligned_cols=205 Identities=16% Similarity=0.067 Sum_probs=113.7
Q ss_pred HHHHhHcCCCEEEEcc---------CCCCh----hHHHHHHHHHHHhcccccccCCccceEe----eecccchhhHHHHH
Q 013498 107 ARQLAKLGVDIIEAGF---------PAASK----EDFEAVRTIAKEVGNAVDAESGYVPVIC----GLSRCNERDIKTAW 169 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~---------p~~~~----~d~e~v~~l~~~~~~~~~~~~~l~~~i~----~~~r~~~~dI~~a~ 169 (442)
++.++++|++.|=+|. |...+ +....++.+++... .|.++ ||+ +.+.+.+..
T Consensus 28 A~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~---------~PviaD~d~Gyg--~~~~~~~~v 96 (290)
T 2hjp_A 28 AKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVS---------IPLIADIDTGFG--NAVNVHYVV 96 (290)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCS---------SCEEEECTTTTS--SHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC---------CCEEEECCCCCC--CHHHHHHHH
Confidence 6677889999998862 32221 12344555544321 24333 233 444554444
Q ss_pred HHHHhCCCCEEEEeecCChH---HHH--HHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCC--CCCCHHHHHHHHHH
Q 013498 170 EAVKYAKRPRIHTFIATSGI---HME--HKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDA--GRSDRKFLYEILGE 242 (442)
Q Consensus 170 e~l~~~g~~~v~i~~~~Sd~---h~~--~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~eda--sr~d~~~l~~~~~~ 242 (442)
..+..+|+..|++-....+- |+. .+-=.+.++..++++.+++....-|+ .|.--. |+ .....+.+.+-++.
T Consensus 97 ~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~-~i~aRt-da~~a~~g~~~ai~Ra~a 174 (290)
T 2hjp_A 97 PQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDF-VVIARV-EALIAGLGQQEAVRRGQA 174 (290)
T ss_dssp HHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTS-EEEEEE-CTTTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCc-EEEEee-hHhhccccHHHHHHHHHH
Confidence 44555799999998776431 332 11113556666666655554333233 122212 22 22346788888899
Q ss_pred HHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCEEEeccccccccc
Q 013498 243 VIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQVEVTINGIGERA 321 (442)
Q Consensus 243 ~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~~vd~Tv~GlGera 321 (442)
..++|||.|.+.=. .-.++++.++.+.+... +|+-+-+-.-..+ ..-.--+.| ++.|-..... -|+
T Consensus 175 y~eAGAd~i~~e~~--~~~~~~~~~i~~~~~~~------vP~i~n~~~~~~~---~~~eL~~lG~v~~v~~~~~~--~ra 241 (290)
T 2hjp_A 175 YEEAGADAILIHSR--QKTPDEILAFVKSWPGK------VPLVLVPTAYPQL---TEADIAALSKVGIVIYGNHA--IRA 241 (290)
T ss_dssp HHHTTCSEEEECCC--CSSSHHHHHHHHHCCCS------SCEEECGGGCTTS---CHHHHHTCTTEEEEEECSHH--HHH
T ss_pred HHHcCCcEEEeCCC--CCCHHHHHHHHHHcCCC------CCEEEeccCCCCC---CHHHHHhcCCeeEEEechHH--HHH
Confidence 99999999988421 34467776665555321 4454432211122 223444568 8887655544 377
Q ss_pred CcccHHHHHHHHHhcc
Q 013498 322 GNASLEEVVMAFKCRG 337 (442)
Q Consensus 322 GNa~lEevv~~L~~~g 337 (442)
-+.++++++..|...|
T Consensus 242 a~~a~~~~~~~i~~~g 257 (290)
T 2hjp_A 242 AVGAVREVFARIRRDG 257 (290)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8888888888887765
No 348
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=80.85 E-value=14 Score=36.45 Aligned_cols=111 Identities=14% Similarity=0.116 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEEccCCCCC-------------------------CCH-------HHHHHHHHHHHHcCC
Q 013498 201 QVVEIARSMVKFARSLGCDDVEFSPEDAGR-------------------------SDR-------KFLYEILGEVIKVGA 248 (442)
Q Consensus 201 e~l~~~~~~v~~ar~~G~~~V~f~~edasr-------------------------~d~-------~~l~~~~~~~~~~Ga 248 (442)
+.++..+++++.+++.|.. +.+.+..++| .+. +.+.+.++.+.++|.
T Consensus 80 ~~i~~~~~~~~~vh~~G~~-i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGf 158 (340)
T 3gr7_A 80 DHIAGLRELVGLVKEHGAA-IGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGF 158 (340)
T ss_dssp THHHHHHHHHHHHHHTTCE-EEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCe-EEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4456677888888999874 4443221111 122 344455566777899
Q ss_pred cEEecc-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeec--------CCcchHHHH
Q 013498 249 TTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQ--------NDLGLSTAN 298 (442)
Q Consensus 249 d~I~la-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~H~H--------NDlGLA~AN 298 (442)
|.|-|- |-.|... +.-+.++++.+++.+ + .+|++-.. ++.--.+.-
T Consensus 159 DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~---~pv~vRls~~~~~~~g~~~~~~~~l 234 (340)
T 3gr7_A 159 DVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-D---GPLFVRISASDYHPDGLTAKDYVPY 234 (340)
T ss_dssp SEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-C---SCEEEEEESCCCSTTSCCGGGHHHH
T ss_pred CEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-C---CceEEEeccccccCCCCCHHHHHHH
Confidence 977652 4445432 233578889999987 3 33444333 123344445
Q ss_pred HHHHHHhCCCEEEecccc
Q 013498 299 TIAGACAGARQVEVTING 316 (442)
Q Consensus 299 alaAl~aGa~~vd~Tv~G 316 (442)
+...-++|+++|+++-.+
T Consensus 235 a~~L~~~Gvd~i~vs~g~ 252 (340)
T 3gr7_A 235 AKRMKEQGVDLVDVSSGA 252 (340)
T ss_dssp HHHHHHTTCCEEEEECCC
T ss_pred HHHHHHcCCCEEEEecCC
Confidence 555567899999998654
No 349
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=80.83 E-value=12 Score=36.69 Aligned_cols=111 Identities=12% Similarity=0.109 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEEccCCCCC--------------------CCH------------HHHHHHHHHHHHcC
Q 013498 200 QQVVEIARSMVKFARSLGCDDVEFSPEDAGR--------------------SDR------------KFLYEILGEVIKVG 247 (442)
Q Consensus 200 ~e~l~~~~~~v~~ar~~G~~~V~f~~edasr--------------------~d~------------~~l~~~~~~~~~~G 247 (442)
++.++..+++++.+++.|.. +.+.+..++| .+| +.+.+.++.+.++|
T Consensus 79 d~~~~~~~~~~~~vh~~g~~-i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aG 157 (338)
T 1z41_A 79 DEHIEGFAKLTEQVKEQGSK-IGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAG 157 (338)
T ss_dssp THHHHHHHHHHHHHHHTTCE-EEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCE-EEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 34456667788888889874 5554433222 111 45566777788899
Q ss_pred CcEEecc-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEee------c--CCcchHHH
Q 013498 248 ATTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHC------Q--NDLGLSTA 297 (442)
Q Consensus 248 ad~I~la-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~H~------H--NDlGLA~A 297 (442)
.|.|-|- |-.|... +..+.++++.+++.+ + .+|++-. | .+.--+..
T Consensus 158 fDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~---~pv~vris~~~~~~~g~~~~~~~~ 233 (338)
T 1z41_A 158 FDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-D---GPLFVRVSASDYTDKGLDIADHIG 233 (338)
T ss_dssp CSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-C---SCEEEEEECCCCSTTSCCHHHHHH
T ss_pred CCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-C---CcEEEEecCcccCCCCCCHHHHHH
Confidence 9987652 3334332 445678889999987 3 3455442 2 12222333
Q ss_pred HHHHHHHhCCCEEEeccc
Q 013498 298 NTIAGACAGARQVEVTIN 315 (442)
Q Consensus 298 NalaAl~aGa~~vd~Tv~ 315 (442)
-+....++|+++|+++-.
T Consensus 234 ~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 234 FAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp HHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHcCCCEEEEecC
Confidence 444555789999999754
No 350
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=80.77 E-value=57 Score=33.92 Aligned_cols=156 Identities=21% Similarity=0.300 Sum_probs=101.1
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+|..++..| +...+.|+|.|-+-|. .+++|...++.+.+..+.. ...++-.. +.+.++..-+.+.. .
T Consensus 190 ltekD~~dl-~~~~~~~vD~i~~sfV-r~a~dv~~~r~~l~~~~~~-------i~IiaKIE--~~eav~nldeIl~~--s 256 (499)
T 3hqn_D 190 VSAKDRVDL-QFGVEQGVDMIFASFI-RSAEQVGDVRKALGPKGRD-------IMIICKIE--NHQGVQNIDSIIEE--S 256 (499)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTC-CSHHHHHHHHHHHCGGGTT-------SEEEEEEC--SHHHHHTHHHHHHH--S
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecCC-CCHHHHHHHHHHHHhcCCC-------CeEEEEEC--CHHHHHhHHHHHHh--C
Confidence 677888777 6677899999999776 5677877777665432211 11222222 34444433222222 3
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------ccCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f------~~edasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
+. ++++-.|+=.+ +..+++...-+++++.|+.+|.. |.+ ++....|-+..++-+++.++.+ |+|.|
T Consensus 257 Dg--ImVaRGDLgvE----i~~e~vp~~Qk~iI~~c~~agkp-Vi~ATQmLeSMi~~p~PTRAEvsDVanaV~d-G~Dav 328 (499)
T 3hqn_D 257 DG--IMVARGDLGVE----IPAEKVVVAQKILISKCNVAGKP-VICATQMLESMTYNPRPTRAEVSDVANAVFN-GADCV 328 (499)
T ss_dssp SE--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCC-EEEESSSSGGGGTSSSCCHHHHHHHHHHHHH-TCSEE
T ss_pred Cc--EEEccccccCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEeehhHHHhccCCCccHHHHHHHHHHHHc-CCcEE
Confidence 43 45555554332 35678888889999999999986 555 2234556777888888877764 99999
Q ss_pred ecc-CcccccCHHHHHHHHHHHHH
Q 013498 252 NIP-DTVGITMPTEFGKLIADIKA 274 (442)
Q Consensus 252 ~la-DT~G~~~P~~v~~li~~l~~ 274 (442)
-|. .|.---.|-+.-+.+..+.+
T Consensus 329 MLSgETA~G~yPveaV~~m~~I~~ 352 (499)
T 3hqn_D 329 MLSGETAKGKYPNEVVQYMARICL 352 (499)
T ss_dssp EESHHHHTCSCHHHHHHHHHHHHH
T ss_pred EEeccccCCCCHHHHHHHHHHHHH
Confidence 995 67777788887766666653
No 351
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=80.68 E-value=4.8 Score=40.32 Aligned_cols=103 Identities=8% Similarity=-0.031 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|.+.|++.||--+| +++++..+++.+. .-+|.+.+=.-.+.++++..++.
T Consensus 202 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 266 (391)
T 2qgy_A 202 AVPEDLDQTKSFLKEVSSFNPYWIEEPVD---GENISLLTEIKNT---------FNMKVVTGEKQSGLVHFRELISR--- 266 (391)
T ss_dssp CCCSCHHHHHHHHHHHGGGCCSEEECSSC---TTCHHHHHHHHHH---------CSSCEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEeCCCC---hhhHHHHHHHHhh---------CCCCEEEcCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|. ++..+-.-+..+.+++++|++.|+. +..+..
T Consensus 267 ~~~d~v~-------------ik~~~~GGit~~~~i~~~A~~~gi~-~~~~~~ 304 (391)
T 2qgy_A 267 NAADIFN-------------PDISGMGGLIDIIEISNEASNNGIF-ISPHCW 304 (391)
T ss_dssp TCCSEEC-------------CBTTTSSCHHHHHHHHHHHHHTTCE-ECCBCC
T ss_pred CCCCEEE-------------ECcchhCCHHHHHHHHHHHHHCCCE-EeccCC
No 352
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=80.59 E-value=15 Score=35.82 Aligned_cols=161 Identities=18% Similarity=0.122 Sum_probs=88.7
Q ss_pred HHHHHHHhHcCC-CEEEEccCCCChhHH-HHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEEE
Q 013498 104 LDIARQLAKLGV-DIIEAGFPAASKEDF-EAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRIH 181 (442)
Q Consensus 104 l~ia~~L~~~GV-~~IEvG~p~~~~~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v~ 181 (442)
.+++..+.++|. ..|..++ .+++.. +.++.+.+.... -+...+..+ ..+++..++....+|++.|.
T Consensus 26 ~~la~av~~aG~lG~i~~~~--~~~~~~~~~i~~i~~~~~~------p~gvnl~~~----~~~~~~~~~~a~~~g~d~V~ 93 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGGGN--APKEVVKANIDKIKSLTDK------PFGVNIMLL----SPFVEDIVDLVIEEGVKVVT 93 (332)
T ss_dssp HHHHHHHHHHTSBEEEECTT--CCHHHHHHHHHHHHHHCCS------CEEEEECTT----STTHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhCCCcEEeCCCC--CCHHHHHHHHHHHHHhcCC------CEEEEecCC----CCCHHHHHHHHHHCCCCEEE
Confidence 456777888885 7776654 355443 345555443210 011122211 22344444445557999988
Q ss_pred EeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccC--cccc
Q 013498 182 TFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPD--TVGI 259 (442)
Q Consensus 182 i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laD--T~G~ 259 (442)
+..... .+.++.+++.|+. |.+.. .+++ .++.+.+.|+|.|.+-. +-|.
T Consensus 94 ~~~g~p-------------------~~~i~~l~~~g~~-v~~~v-----~~~~----~a~~~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 94 TGAGNP-------------------SKYMERFHEAGII-VIPVV-----PSVA----LAKRMEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp ECSSCG-------------------GGTHHHHHHTTCE-EEEEE-----SSHH----HHHHHHHTTCSCEEEECTTSSEE
T ss_pred ECCCCh-------------------HHHHHHHHHcCCe-EEEEe-----CCHH----HHHHHHHcCCCEEEEECCCCCCC
Confidence 754321 1235556667874 55443 2233 45667789999988832 2222
Q ss_pred cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchH-HHHHHHHHHhCCCEEEec
Q 013498 260 TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLS-TANTIAGACAGARQVEVT 313 (442)
Q Consensus 260 ~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA-~ANalaAl~aGa~~vd~T 313 (442)
.-.....+++..+++.+. +||-.= -|.. -.|+.+++..||+.|...
T Consensus 145 ~g~~~~~~ll~~i~~~~~----iPViaa----GGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 145 IGKLTTMTLVRQVATAIS----IPVIAA----GGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CCSSCHHHHHHHHHHHCS----SCEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCccHHHHHHHHHHhcC----CCEEEE----CCCCCHHHHHHHHHcCCCEEEec
Confidence 111123377888887662 444432 3444 467888888999998764
No 353
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=80.55 E-value=32 Score=34.37 Aligned_cols=161 Identities=14% Similarity=0.075 Sum_probs=96.2
Q ss_pred chhhHHH-HHHHHHh---CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCCCeEEEccCCCCCCCHHH
Q 013498 161 NERDIKT-AWEAVKY---AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS-LGCDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 161 ~~~dI~~-a~e~l~~---~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~-~G~~~V~f~~edasr~d~~~ 235 (442)
.++|+.+ +++.++. -|+..+.+. .++......-|.+.+++++.+.+.++.+++ .|+. +.+-.--.-..+++.
T Consensus 90 t~ed~~r~a~e~~ed~a~dgV~Y~Eir--f~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~-~rlI~~~~R~~~~e~ 166 (380)
T 4gxw_A 90 RPDDLRRIAYEYLEDAAAHNVRHAEFF--WNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIG-ARLIPSIDREQDPDE 166 (380)
T ss_dssp SHHHHHHHHHHHHHHHHTTTEEEEEEE--ECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCE-EEEEEEEETTSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCeEEEEE--cCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCHHH
Confidence 5566654 3444333 344444443 345444334578999999999888887654 5764 443221112346788
Q ss_pred HHHHHHHHHHcC---CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEE
Q 013498 236 LYEILGEVIKVG---ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVE 311 (442)
Q Consensus 236 l~~~~~~~~~~G---ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~-aGa~~vd 311 (442)
..++++.+.+.- +-.|.|+=.=....|..+.+.+...++. ++++-+|+=.. |....|...|++ .|+++|+
T Consensus 167 a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~-----Gl~~t~HAGE~-~~p~~~i~~al~~lga~RIg 240 (380)
T 4gxw_A 167 AVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAA-----GFRTTAHAGEF-GMPWRNVETAVDLLHVDRVD 240 (380)
T ss_dssp HHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT-----TCEEEEEESCT-TCCHHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc-----CCCeeeecccc-CCchHHHHHHHHHcCCcccc
Confidence 888888877663 3345443222235677888888888875 37799999763 333346777886 6999985
Q ss_pred ecccccccccCcccHHHHHHHHHhcc
Q 013498 312 VTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 312 ~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
=.+.= ..=++++..+..++
T Consensus 241 HG~~~-------~~d~~L~~~l~~~~ 259 (380)
T 4gxw_A 241 HGYTI-------VDNPELCARYAERG 259 (380)
T ss_dssp ECGGG-------GGCHHHHHHHHHHT
T ss_pred cceee-------ccChHHHHHHHHhC
Confidence 33321 12245566666553
No 354
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=80.49 E-value=39 Score=33.60 Aligned_cols=164 Identities=17% Similarity=0.083 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccce-EeeecccchhhHHHHHHHHHhCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPV-ICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~-i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
-+.++..+-++.+.+.|++.+-+=......+|.+.++.+++.++... ... +=+....+.++..+..+.+...+
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~g~~~------~l~~vDan~~~~~~~A~~~~~~l~~~~ 214 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRV------RIKSYDFSHLLNWKDAHRAIKRLTKYD 214 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHGGGC------EEEEEECTTCSCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHcCCCC------cEEEecCCCCcCHHHHHHHHHHHHhcC
Confidence 35778888888888999999887322223457888999888765421 112 22223334555555556666677
Q ss_pred C--CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEec
Q 013498 177 R--PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNI 253 (442)
Q Consensus 177 ~--~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~l 253 (442)
+ ..|. -|+.+- + ++ .+.+..+..++. | |.+-.+++.+.++ .+.| +|.|.+
T Consensus 215 i~~~~iE--qP~~~~--------d----~~---~~~~l~~~~~iP-I-----dE~~~~~~~~~~~----~~~~~~d~v~~ 267 (391)
T 3gd6_A 215 LGLEMIE--SPAPRN--------D----FD---GLYQLRLKTDYP-I-----SEHVWSFKQQQEM----IKKDAIDIFNI 267 (391)
T ss_dssp SSCCEEE--CCSCTT--------C----HH---HHHHHHHHCSSC-E-----EEECCCHHHHHHH----HHHTCCSEEEE
T ss_pred CCcceec--CCCChh--------h----HH---HHHHHHHHcCCC-c-----CCCCCCHHHHHHH----HHcCCCCEEEE
Confidence 7 5555 333210 1 12 222333445654 5 3344555554443 3444 566554
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 254 aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
|..=+.-..+..++....++. ++++.+|+-...+++++-++
T Consensus 268 -k~~~~GGit~~~~ia~~A~~~-----gi~~~~~~~~es~i~~aa~~ 308 (391)
T 3gd6_A 268 -SPVFIGGLTSAKKAAYAAEVA-----SKDVVLGTTQELSVGTAAMA 308 (391)
T ss_dssp -CHHHHTSHHHHHHHHHHHHHT-----TCEEEECCCCCCHHHHHHHH
T ss_pred -CchhcCCHHHHHHHHHHHHHc-----CCEEEecCCCccHHHHHHHH
Confidence 555555566666666666554 36777777666666666554
No 355
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=80.29 E-value=5 Score=40.00 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=67.1
Q ss_pred HHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec--cCcccccCHHHHH--HHHHHHHHhCCCCccee
Q 013498 208 SMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI--PDTVGITMPTEFG--KLIADIKANTPGIENVV 283 (442)
Q Consensus 208 ~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l--aDT~G~~~P~~v~--~li~~l~~~~p~~~~v~ 283 (442)
.+++++.+.|.+ |-++- +-++.+++...++.+.+.|.+ |.| |- .++-+|.+.. ..|..|++.+|+ ++
T Consensus 126 pLL~~va~~gKP-viLst---Gmstl~Ei~~Ave~i~~~g~~-viLlhC~-s~YPt~~~~~nL~aI~~Lk~~fp~---lp 196 (350)
T 3g8r_A 126 PLLERIARSDKP-VVAST---AGARREDIDKVVSFMLHRGKD-LTIMHCV-AEYPTPDDHLHLARIKTLRQQYAG---VR 196 (350)
T ss_dssp HHHHHHHTSCSC-EEEEC---TTCCHHHHHHHHHHHHTTTCC-EEEEECC-CCSSCCGGGCCTTHHHHHHHHCTT---SE
T ss_pred HHHHHHHhhCCc-EEEEC---CCCCHHHHHHHHHHHHHcCCC-EEEEecC-CCCCCCcccCCHHHHHHHHHHCCC---CC
Confidence 456667778876 76653 335888898888888888876 555 64 3555554443 356788998974 77
Q ss_pred EEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 284 ISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 284 i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
|++=-|-.-+ ..+-+++|+.+||+.|+.=+
T Consensus 197 VG~SdHt~g~-~~~~~~AAvAlGA~vIEkH~ 226 (350)
T 3g8r_A 197 IGYSTHEDPD-LMEPIMLAVAQGATVFEKHV 226 (350)
T ss_dssp EEEEECCCSS-CCHHHHHHHHTTCCEEEEEB
T ss_pred EEcCCCCCCC-ccHHHHHHHHcCCCEEEEec
Confidence 8887787522 13456899999999986533
No 356
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=80.25 E-value=31 Score=31.84 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCccccc---CHHHHHHHHHHHHHhCCCCccee--EEEeecCCcchHHHHHHHHHHh
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVGIT---MPTEFGKLIADIKANTPGIENVV--ISTHCQNDLGLSTANTIAGACA 305 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G~~---~P~~v~~li~~l~~~~p~~~~v~--i~~H~HNDlGLA~ANalaAl~a 305 (442)
.+.+-...-++.+++.|||.|-+.=-.|.+ .-..+.+-+..+++..++. .++ ++.-..++-- =.--+..|.++
T Consensus 68 ~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~-i~~a~~ia~ea 145 (220)
T 1ub3_A 68 QEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEE-IARLAEAAIRG 145 (220)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHH-HHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHH-HHHHHHHHHHh
Confidence 444555566677777888877666566643 5566777777777765431 133 3333333222 22345678899
Q ss_pred CCCEEEecccccccccCcccHHHHHHHHH
Q 013498 306 GARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 306 Ga~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
|||+|-++. |. .+|++..|++-.+.+
T Consensus 146 GADfVKTsT-Gf--~~~gat~~dv~~m~~ 171 (220)
T 1ub3_A 146 GADFLKTST-GF--GPRGASLEDVALLVR 171 (220)
T ss_dssp TCSEEECCC-SS--SSCCCCHHHHHHHHH
T ss_pred CCCEEEeCC-CC--CCCCCCHHHHHHHHH
Confidence 999999985 22 247788887755554
No 357
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=80.25 E-value=4.1 Score=41.04 Aligned_cols=68 Identities=24% Similarity=0.282 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEE-eecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVIST-HCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~-H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
.+.++.+.++|+|.|.| |+ +...|..+.++++.+++.+|+ ++|.+ ..+ ...-+..+.++||+.|.++.
T Consensus 155 ~~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~---~pviv~~v~-----~~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 155 IERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPN---LDLIAGNIV-----TKEAALDLISVGADCLKVGI 223 (404)
T ss_dssp HHHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTT---CEEEEEEEC-----SHHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCC---CeEEEcCCC-----cHHHHHHHHhcCCCEEEECC
Confidence 45567778899999988 32 234688899999999999864 56665 233 24567788899999999953
No 358
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=80.21 E-value=8 Score=38.71 Aligned_cols=100 Identities=18% Similarity=0.168 Sum_probs=65.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.++.++-+++++.|.+.|++.||--+| +++++..+.+.+... +|.+.+=.-.+..+++..++. ..
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---~~ 263 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIEQPLP---AWDLDGMARLRGKVA---------TPIYADESAQELHDLLAIINK---GA 263 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHTTCS---------SCEEESTTCCSHHHHHHHHHH---TC
T ss_pred CCCHHHHHHHHHHHHhCCCCEEECCCC---hhhHHHHHHHHhhCC---------CCEEEeCCcCCHHHHHHHHHc---CC
Confidence 478999999999999999999997543 456777777766421 232222111245667666654 34
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
++.|.+=. + +. .-+..+.++++.|++.|+. +..++
T Consensus 264 ~d~v~ik~--~------~~-----GGit~~~~i~~~A~~~g~~-~~~~~ 298 (397)
T 2qde_A 264 ADGLMIKT--Q------KA-----GGLLKAQRWLTLARLANLP-VICGC 298 (397)
T ss_dssp CSEEEECH--H------HH-----TSHHHHHHHHHHHHHHTCC-EEECC
T ss_pred CCEEEEec--c------cc-----CCHHHHHHHHHHHHHcCCe-EEEec
Confidence 56655411 1 11 1256677899999999996 77775
No 359
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=80.00 E-value=50 Score=32.83 Aligned_cols=198 Identities=15% Similarity=0.142 Sum_probs=111.6
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHhHcCCCEEEEccCC---------CCh---h---------HHHHHHHHHHHhccccc
Q 013498 89 DGEQSPG--ATLTSKEKLDIARQLAKLGVDIIEAGFPA---------ASK---E---------DFEAVRTIAKEVGNAVD 145 (442)
Q Consensus 89 DG~Q~~g--~~fs~e~kl~ia~~L~~~GV~~IEvG~p~---------~~~---~---------d~e~v~~l~~~~~~~~~ 145 (442)
.+.+..+ ...+.+....+++.-.+++-+.|=-.++. ... + -...++.+++..
T Consensus 26 ~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~----- 100 (358)
T 1dos_A 26 ENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHY----- 100 (358)
T ss_dssp HTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHC-----
Confidence 3444443 24678999999999999999976332221 001 0 023344444432
Q ss_pred ccCCccceEeeecccch---hhHHHHHHHHH-------hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 013498 146 AESGYVPVICGLSRCNE---RDIKTAWEAVK-------YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARS 215 (442)
Q Consensus 146 ~~~~l~~~i~~~~r~~~---~dI~~a~e~l~-------~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~ 215 (442)
-+|++.-+=-+.. +.++.++++.. ..|...|.+ -.| ..+.+|+++..++.+++|+.
T Consensus 101 ----~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMi--DgS--------~~p~eENI~~Tkevv~~ah~ 166 (358)
T 1dos_A 101 ----GVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMI--DLS--------EESLQENIEICSKYLERMSK 166 (358)
T ss_dssp ----TCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEE--CCT--------TSCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEee--cCC--------CCCHHHHHHHHHHHHHHHHH
Confidence 1344332222222 56777776642 135666543 333 34789999999999999999
Q ss_pred cCCCeEEE--c----cCCC----------CCCCHHHHHHHHHHHHHcCCc-EEeccCcc----ccc-------CHHHHHH
Q 013498 216 LGCDDVEF--S----PEDA----------GRSDRKFLYEILGEVIKVGAT-TLNIPDTV----GIT-------MPTEFGK 267 (442)
Q Consensus 216 ~G~~~V~f--~----~eda----------sr~d~~~l~~~~~~~~~~Gad-~I~laDT~----G~~-------~P~~v~~ 267 (442)
.|+. |+. + -||. -.++|+...+++++.- |+| ...||=++ |.. .|+...+
T Consensus 167 ~gvs-VEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~tt--gvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~ 243 (358)
T 1dos_A 167 IGMT-LEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELS--KISPRFTIAASFGNVHGVYKAGNVVLTPTILRD 243 (358)
T ss_dssp TTCE-EEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHH--TTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHH
T ss_pred cCCE-EEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhc--CCChhceEEEecccccCccCCCCCCcCHHHHHH
Confidence 9983 643 2 2432 2489999988887643 444 22233233 333 3344444
Q ss_pred HHHHHHHhC--CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEE
Q 013498 268 LIADIKANT--PGIENVVISTHCQNDLGLSTANTIAGACAGARQVE 311 (442)
Q Consensus 268 li~~l~~~~--p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd 311 (442)
+=+.+++.+ |.. +++|.+|.=. |.....-..|+..|+.-|+
T Consensus 244 i~~~i~~~~g~~~~-~vpLVlHGgS--G~~~e~i~~ai~~GV~KiN 286 (358)
T 1dos_A 244 SQEYVSKKHNLPHN-SLNFVFHGGS--GSTAQEIKDSVSYGVVKMN 286 (358)
T ss_dssp HHHHHHHHHTCCTT-CSCEEECSCT--TCCHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHhCCCCC-CCcEEEeCCC--CCCHHHHHHHHHCCCeEEE
Confidence 333333332 221 3778887743 6666666677777766653
No 360
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=79.97 E-value=6.3 Score=39.47 Aligned_cols=98 Identities=17% Similarity=0.031 Sum_probs=56.3
Q ss_pred HHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCc---ccccCHHHHHHHHHHHHHhCCCCcce
Q 013498 206 ARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDT---VGITMPTEFGKLIADIKANTPGIENV 282 (442)
Q Consensus 206 ~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT---~G~~~P~~v~~li~~l~~~~p~~~~v 282 (442)
+.+.++.+++.|+. +.+... .. + ..+.++.+.++|+|.+.+--+ .+...|....+-+.++++.++ +
T Consensus 144 ~~~~i~~~~~~g~~-v~~~v~--~~-~---~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~----~ 212 (393)
T 2qr6_A 144 LSERIAQVRDSGEI-VAVRVS--PQ-N---VREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLD----V 212 (393)
T ss_dssp HHHHHHHHHHTTSC-CEEEEC--TT-T---HHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCS----S
T ss_pred HHHHHHHHhhcCCe-EEEEeC--Cc-c---HHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcC----C
Confidence 34567788888875 443221 11 1 234566677889998865311 112234322233677777763 4
Q ss_pred eEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 283 VISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 283 ~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
+|.+- ..+...-+..++++||+.|.++.+|-|
T Consensus 213 pvi~g----gi~t~e~a~~~~~~Gad~i~vg~Gg~~ 244 (393)
T 2qr6_A 213 PVIAG----GVNDYTTALHMMRTGAVGIIVGGGENT 244 (393)
T ss_dssp CEEEE----CCCSHHHHHHHHTTTCSEEEESCCSCC
T ss_pred CEEEC----CcCCHHHHHHHHHcCCCEEEECCCccc
Confidence 55551 234455678889999999999665543
No 361
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=79.89 E-value=4.5 Score=41.77 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=53.5
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
..+.++.+.++|++.|.+.=+.| .|....+.++.+++.+|+ ++|.+- .++...-+..+.++|++.|.++..
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~---~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~~ 308 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPD---LPVVAG----NVATPEGTEALIKAGADAVKVGVG 308 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTT---SCEEEE----EECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCC---ceEEeC----CcCCHHHHHHHHHcCCCEEEEcCC
Confidence 34678888999999999833334 567788999999999875 455542 244556678889999999999654
Q ss_pred c
Q 013498 316 G 316 (442)
Q Consensus 316 G 316 (442)
|
T Consensus 309 ~ 309 (494)
T 1vrd_A 309 P 309 (494)
T ss_dssp C
T ss_pred C
Confidence 3
No 362
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=79.65 E-value=6.1 Score=38.72 Aligned_cols=80 Identities=23% Similarity=0.305 Sum_probs=49.2
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeccC-cc--cccC---HHHHHHHH---HHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV--GITM---PTEFGKLI---ADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~laD-T~--G~~~---P~~v~~li---~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
|.+++ +++...+.++.+.+.|||.|-+.= ++ |.-. -+++.+++ +.|++.. +++|++=+=+ -
T Consensus 25 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~----~vpiSIDT~~-----~ 95 (314)
T 2vef_A 25 DGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES----DVLISIDTWK-----S 95 (314)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC----CCEEEEECSC-----H
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC----CceEEEeCCC-----H
Confidence 55655 678888888899999999886642 21 2110 15555555 4466654 3788885544 4
Q ss_pred HHHHHHHHhCCCEEEeccc
Q 013498 297 ANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 297 ANalaAl~aGa~~vd~Tv~ 315 (442)
.-+.+|+++||+.|+---+
T Consensus 96 ~Va~aAl~aGa~iINDVsg 114 (314)
T 2vef_A 96 QVAEAALAAGADLVNDITG 114 (314)
T ss_dssp HHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEECCC
Confidence 4567899999999975443
No 363
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=79.59 E-value=7.4 Score=38.39 Aligned_cols=106 Identities=12% Similarity=0.175 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|++.||=-+| +++++..+++++. .-+|...+=.-.+..+++..++.
T Consensus 191 n~~~~~~~a~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~l~~--- 255 (354)
T 3jva_A 191 NQAWTPKDAVKAIQALADYQIELVEQPVK---RRDLEGLKYVTSQ---------VNTTIMADESCFDAQDALELVKK--- 255 (354)
T ss_dssp TTCSCHHHHHHHHHHTTTSCEEEEECCSC---TTCHHHHHHHHHH---------CSSEEEESTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHHh---------CCCCEEEcCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC-CC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-AG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed-as 229 (442)
..++.|.+ +.++-.-+..+.++++.|+++|+. +.++.+. .+
T Consensus 256 ~~~d~v~~-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~~~es 297 (354)
T 3jva_A 256 GTVDVINI-------------KLMKCGGIHEALKINQICETAGIE-CMIGCMAEET 297 (354)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCCTTCC
T ss_pred CCCCEEEE-------------CchhcCCHHHHHHHHHHHHHcCCe-EEecCCCccc
No 364
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=79.57 E-value=24 Score=32.95 Aligned_cols=202 Identities=10% Similarity=0.043 Sum_probs=107.8
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
..|-.+....+-+.+.+.|++.+-.........+.+.++.+.... ++ + |.... ...+.+...++.+...
T Consensus 14 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~---vd---g----iIi~~-~~~~~~~~~~~~~~~~ 82 (313)
T 3m9w_A 14 LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG---VD---V----LVIIP-YNGQVLSNVVKEAKQE 82 (313)
T ss_dssp SSTTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTT---CS---E----EEEEC-SSTTSCHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcC---CC---E----EEEeC-CChhhhHHHHHHHHHC
Confidence 346677778888999999998776543222223345666655431 11 1 22111 2333333445555566
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCeEEEc-cCCCCCCCHHHHHHHHHHHHHcC----Cc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFAR-SLGCDDVEFS-PEDAGRSDRKFLYEILGEVIKVG----AT 249 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar-~~G~~~V~f~-~edasr~d~~~l~~~~~~~~~~G----ad 249 (442)
|++.|.+-....+.......+.+. .+....+++++. +.|...+.|- .........+.+.-+.+.+.+.| ..
T Consensus 83 ~iPvV~~~~~~~~~~~~~~V~~D~---~~~g~~a~~~L~~~~G~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~~~~~~~ 159 (313)
T 3m9w_A 83 GIKVLAYDRMINDADIDFYISFDN---EKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 159 (313)
T ss_dssp TCEEEEESSCCTTSCCSEEEEECH---HHHHHHHHHHHHHHCSSEEEEEEESCTTCHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEECCcCCCCCceEEEecCH---HHHHHHHHHHHHHhCCCCcEEEEECCCCCccHHHHHHHHHHHHHhhccCCCEE
Confidence 888766533222110000112222 344556777777 7887655543 22222223345555566666663 32
Q ss_pred EEeccCcccccCHHHHHHHHHHHHHhC-CCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 250 TLNIPDTVGITMPTEFGKLIADIKANT-PGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 250 ~I~laDT~G~~~P~~v~~li~~l~~~~-p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
.+.- .-.+-..+...++.+..+.+.. |++ =.+=|.||. +|+.-.-++-++|.+ =|.+|.|++
T Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~----~ai~~~~d~-~a~g~~~al~~~G~~-~di~vig~d 222 (313)
T 3m9w_A 160 VVGD-QWVDGWLPENALKIMENALTANNNKI----DAVVASNDA-TAGGAIQALSAQGLS-GKVAISGQD 222 (313)
T ss_dssp EEEE-EECGGGCHHHHHHHHHHHHHHTTTCC----CEEEESSHH-HHHHHHHHHHTTTCT-TTSEECCCS
T ss_pred EEee-ccCCCcCHHHHHHHHHHHHHhCCCCe----eEEEECCCc-hHHHHHHHHHHcCCC-CCcEEEecC
Confidence 2211 1145567888888888877766 542 245566663 555555556677877 468888876
No 365
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=79.46 E-value=33 Score=33.11 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=91.2
Q ss_pred HHHHhHcCCCEEEEcc----CCCChhHHHHHHHHHHHhcccccccCCccceEeeecccch-------hhHH---HHHHHH
Q 013498 107 ARQLAKLGVDIIEAGF----PAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-------RDIK---TAWEAV 172 (442)
Q Consensus 107 a~~L~~~GV~~IEvG~----p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~-------~dI~---~a~e~l 172 (442)
+....+.|.+.||+=. ++..|. ...++.+.+... +| +..+.|.+. .+++ .-++..
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTPS-~g~i~~a~~~~~---------ip-V~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTPS-MGVLQVVKQSVQ---------IP-VFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCCC-HHHHHHHHTTCC---------SC-EEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCC-HHHHHHHHHhcC---------CC-eEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 4556788999999831 222332 244555444221 12 333444432 2222 223344
Q ss_pred HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC-CCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-dasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
+.+|.+.|.+=.=..|- ..+ ++.++++++.++. +. |.|... |..+ |+ .+.++.+.++|+++|
T Consensus 121 ~~~GAdGvVfG~L~~dg------~iD----~~~~~~Li~~a~~--l~-vTFHRAFD~~~-d~---~~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 121 KLYGADGLVFGALTEDG------HID----KELCMSLMAICRP--LP-VTFHRAFDMVH-DP---MAALETLLTLGFERV 183 (287)
T ss_dssp HHTTCSEEEECCBCTTS------CBC----HHHHHHHHHHHTT--SC-EEECGGGGGCS-CH---HHHHHHHHHHTCSEE
T ss_pred HHcCCCEEEEeeeCCCC------CcC----HHHHHHHHHHcCC--Cc-EEEECchhccC-CH---HHHHHHHHHcCCCEE
Confidence 55699988764322221 112 2455566776654 43 777543 4332 33 356777888899999
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEEEecccc
Q 013498 252 NIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQVEVTING 316 (442)
Q Consensus 252 ~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~-aGa~~vd~Tv~G 316 (442)
.-.=. .....+-.++++.+.+...+ .+.|-. .-|.-..|.-.-++ +|++.+|.|...
T Consensus 184 LTSG~--~~~a~~Gl~~Lk~Lv~~a~~--rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 184 LTSGC--DSSALEGLPLIKRLIEQAKG--RIVVMP----GGGITDRNLQRILEGSGATEFHCSARS 241 (287)
T ss_dssp EECTT--SSSTTTTHHHHHHHHHHHTT--SSEEEE----CTTCCTTTHHHHHHHHCCSEEEECCEE
T ss_pred ECCCC--CCChHHhHHHHHHHHHHhCC--CCEEEE----CCCcCHHHHHHHHHhhCCCEEeECcCc
Confidence 87332 22222333444444443322 244443 24555566666565 899999998653
No 366
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=79.44 E-value=49 Score=33.21 Aligned_cols=164 Identities=12% Similarity=0.076 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++..+.++.+.+.|++.+-+..+...+.+.+.++.+++.++..+. ..+=+..+.+.++..+..+.+...++.
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~g~~~~------l~vDaN~~~~~~~A~~~~~~l~~~~l~ 261 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERLGPAVR------IACDMHWAHTASEAVALIKAMEPHGLW 261 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCSSSE------EEEECCSCCCHHHHHHHHHHHGGGCEE
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhccCCeEE------EEeccccCCCHHHHHHHHHhhcccccc
Confidence 57788888999999999999987655555567788888877654211 112222333445544444555555543
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEeccCcc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDTV 257 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~laDT~ 257 (442)
.+ --|+.. +.+..+.+..+..++. |.. |.+-.+...+.++ .+.+ +|.+. .|.
T Consensus 262 ~i--EqP~~~---------------~d~~~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~~----i~~~a~div~-~d~- 314 (412)
T 4h1z_A 262 FA--EAPVRT---------------EDIDGLARVAASVSTA-IAV---GEEWRTVHDMVPR----VARRALAIVQ-PEM- 314 (412)
T ss_dssp EE--ECCSCT---------------TCHHHHHHHHHHCSSE-EEE---CTTCCSHHHHHHH----HHTTCCSEEC-CCH-
T ss_pred ee--cCCCCc---------------cchHHHHHHHhhcCCc-ccc---CCcccchHhHHHH----HHcCCCCEEE-ecC-
Confidence 33 333332 1112333344455553 543 4444555544433 3445 45554 453
Q ss_pred cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 258 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 258 G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
+..=..+..++.... +.. ++++..|+-...|+++|.++
T Consensus 315 ~~GGit~~~kia~~A-~~~----gi~v~~h~~~~~~i~~aa~l 352 (412)
T 4h1z_A 315 GHKGITQFMRIGAYA-HVH----HIKVIPHATIGAGIFLAASL 352 (412)
T ss_dssp HHHHHHHHHHHHHHH-HHT----TCEECCCCCSSCSHHHHHHH
T ss_pred CCCChHHHHHHHHHH-HHC----CCcEEecCCcchHHHHHHHH
Confidence 222123344443333 333 36777777666666665544
No 367
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=79.38 E-value=8.3 Score=38.25 Aligned_cols=102 Identities=13% Similarity=0.189 Sum_probs=66.4
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++-+++++.|.+.|++.||=-+| +++++..+++++..+ +|...+=.-.+..+++..++. .
T Consensus 193 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~~~~---~ 257 (368)
T 3q45_A 193 QGWSVETAIETLTLLEPYNIQHCEEPVS---RNLYTALPKIRQACR---------IPIMADESCCNSFDAERLIQI---Q 257 (368)
T ss_dssp TCBCHHHHHHHHHHHGGGCCSCEECCBC---GGGGGGHHHHHHTCS---------SCEEESTTCCSHHHHHHHHHT---T
T ss_pred CCCChHHHHHHHHHHhhcCCCEEECCCC---hhHHHHHHHHHhhCC---------CCEEEcCCcCCHHHHHHHHHc---C
Confidence 4578999999999999999999996333 556777777776421 243332222355666666543 3
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
.++.|.+=.. +-.-+..+.++++.|+++|+. +.++++
T Consensus 258 ~~d~v~~k~~-------------~~GGit~~~~i~~~A~~~gi~-~~~~~~ 294 (368)
T 3q45_A 258 ACDSFNLKLS-------------KSAGITNALNIIRLAEQAHMP-VQVGGF 294 (368)
T ss_dssp CCSEEEECTT-------------TTTSHHHHHHHHHHHHHTTCC-EEECCS
T ss_pred CCCeEEechh-------------hcCCHHHHHHHHHHHHHcCCc-EEecCc
Confidence 4566554211 112256677899999999996 777664
No 368
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=79.33 E-value=10 Score=37.33 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|++.||=-+|. ++++..+.+.+. .-+|.+.+=.-.+.++++..++.
T Consensus 196 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~---~~~~~~~~l~~~---------~~ipIa~dE~~~~~~~~~~~i~~--- 260 (370)
T 1nu5_A 196 NQGWDEQTASIWIPRLEEAGVELVEQPVPR---ANFGALRRLTEQ---------NGVAILADESLSSLSSAFELARD--- 260 (370)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCCEEECCSCT---TCHHHHHHHHHH---------CSSEEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCcceEeCCCCc---ccHHHHHHHHHh---------CCCCEEeCCCCCCHHHHHHHHHh---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +..+-.-+..+.++++.|+++|+. +.++....+
T Consensus 261 ~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 301 (370)
T 1nu5_A 261 HAVDAFSL-------------KLCNMGGIANTLKVAAVAEAAGIS-SYGGTMLDS 301 (370)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECCSSCC
T ss_pred CCCCEEEE-------------chhhcCCHHHHHHHHHHHHHcCCc-EEecCCcch
No 369
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=79.21 E-value=5.5 Score=39.21 Aligned_cols=99 Identities=18% Similarity=0.172 Sum_probs=64.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~ 175 (442)
.++.++-+++++.|.+.|++.||--+| +++++..+.+.+... +|.+.+ .+ .+.++++..++. .
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iPI~~d-e~~~~~~~~~~~i~~---~ 262 (359)
T 1mdl_A 199 SLDVPAAIKRSQALQQEGVTWIEEPTL---QHDYEGHQRIQSKLN---------VPVQMG-ENWLGPEEMFKALSI---G 262 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTCSCEECCSC---TTCHHHHHHHHHTCS---------SCEEEC-TTCCSHHHHHHHHHT---T
T ss_pred CCCHHHHHHHHHHHHHhCCCeEECCCC---hhhHHHHHHHHHhCC---------CCEEeC-CCCCCHHHHHHHHHc---C
Confidence 468899999999999999999997544 467888888876431 243322 22 245666666553 3
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+ +..+-.-+..+.+++++|+++|+. +..++
T Consensus 263 ~~d~v~i-------------k~~~~GGi~~~~~i~~~A~~~g~~-~~~~~ 298 (359)
T 1mdl_A 263 ACRLAMP-------------DAMKIGGVTGWIRASALAQQFGIP-MSSHL 298 (359)
T ss_dssp CCSEECC-------------BTTTTTHHHHHHHHHHHHHHTTCC-BCCBS
T ss_pred CCCEEee-------------cchhhCCHHHHHHHHHHHHHcCCe-Eeecc
Confidence 4555543 111223366778899999999986 65553
No 370
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=78.99 E-value=8.1 Score=38.85 Aligned_cols=102 Identities=13% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|++.||=-.| +++++..+.+++. .-+|...+=.-.+..+++..++.
T Consensus 199 N~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 263 (393)
T 4dwd_A 199 NNGYSVGGAIRVGRALEDLGYSWFEEPVQ---HYHVGAMGEVAQR---------LDITVSAGEQTYTLQALKDLILS--- 263 (393)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEECCSC---TTCHHHHHHHHHH---------CSSEEEBCTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEECCCC---cccHHHHHHHHhh---------CCCCEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
+++.|. .+.++-.-+..+++++..|+..|+. +.....
T Consensus 264 -~~d~v~-------------~k~~~~GGit~~~~ia~~A~~~gi~-~~~h~~ 300 (393)
T 4dwd_A 264 -GVRMVQ-------------PDIVKMGGITGMMQCAALAHAHGVE-FVPHQT 300 (393)
T ss_dssp -TCCEEC-------------CCTTTTTHHHHHHHHHHHHHHHTCE-ECCCCC
T ss_pred -CCCEEE-------------eCccccCCHHHHHHHHHHHHHcCCE-EeecCC
No 371
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=78.90 E-value=35 Score=30.75 Aligned_cols=166 Identities=15% Similarity=0.081 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++-+++++.+.. .++.+++|.+-....-.+.++.+.+..++. +.+..+-... .-....+....+|.+
T Consensus 14 ~~~~~~~~~~~~~~-~v~~~kv~~~~f~~~G~~~i~~l~~~~p~~--------~v~lD~kl~d--ip~t~~~~~~~~Gad 82 (216)
T 1q6o_A 14 TMDSAYETTRLIAE-EVDIIEVGTILCVGEGVRAVRDLKALYPHK--------IVLADAKIAD--AGKILSRMCFEANAD 82 (216)
T ss_dssp SHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHCTTS--------EEEEEEEECS--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhcc-cCCEEEECHHHHHHhCHHHHHHHHHhCCCC--------eEEEEEEecc--cHHHHHHHHHhCCCC
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC-CCCCCCHHHHHHHHHHHHHcCCcEEec----
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGRSDRKFLYEILGEVIKVGATTLNI---- 253 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-dasr~d~~~l~~~~~~~~~~Gad~I~l---- 253 (442)
.|.+.....+ +.+.++++.+++.|.. +.+.+- ..+ ..-.+.+.+.|.+.+.+
T Consensus 83 ~itvh~~~g~---------------~~l~~~~~~~~~~g~~-~~~~ll~~~t-------~~~~~~l~~~~~~~~vl~~a~ 139 (216)
T 1q6o_A 83 WVTVICCADI---------------NTAKGALDVAKEFNGD-VQIELTGYWT-------WEQAQQWRDAGIGQVVYHRSR 139 (216)
T ss_dssp EEEEETTSCH---------------HHHHHHHHHHHHTTCE-EEEEECSCCC-------HHHHHHHHHTTCCEEEEECCH
T ss_pred EEEEeccCCH---------------HHHHHHHHHHHHcCCC-ceeeeeeCCC-------hhhHHHHHhcCcHHHHHHHHH
Q ss_pred ----cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 254 ----PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 254 ----aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+-..| .|+.+..+-+.+...+| +.+. -|.-..|+-.++++||+.|
T Consensus 140 ~~~~~G~~g--~~~~i~~lr~~~~~~~~----i~v~------GGI~~~~~~~~~~aGad~i 188 (216)
T 1q6o_A 140 DAQAAGVAW--GEADITAIKRLSDMGFK----VTVT------GGLALEDLPLFKGIPIHVF 188 (216)
T ss_dssp HHHHTTCCC--CHHHHHHHHHHHHTTCE----EEEE------SSCCGGGGGGGTTSCCSEE
T ss_pred HHHhcCCCC--CHHHHHHHHHhcCCCCc----EEEE------CCcChhhHHHHHHcCCCEE
No 372
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=78.89 E-value=19 Score=37.30 Aligned_cols=132 Identities=14% Similarity=0.089 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCC-CChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCE
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPA-ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 179 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~-~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~ 179 (442)
++-.+.++.|.++|++.|++.... .++.-.+.++.+.+..+. .+.+.+.. ...++.+.+.++ |++.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~--------~~Vi~g~v-~t~e~a~~l~~a----GaD~ 296 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH--------LEIIGGNV-ATAEGARALIEA----GVSA 296 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT--------CCEEEEEE-CSHHHHHHHHHH----TCSE
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCC--------ceEEEccc-CcHHHHHHHHHh----CCCE
Confidence 344677889999999999997532 233346788888776422 23344322 355566555554 8998
Q ss_pred EEEe-ecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEecc
Q 013498 180 IHTF-IATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (442)
Q Consensus 180 v~i~-~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~la 254 (442)
|.+- -+.+...-+...+.... .+..+.++++.+++.++. |.. +++=.+++.+.+. ..+||+.+.+.
T Consensus 297 I~Vg~g~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iP-VIa---~GGI~~~~di~ka----la~GAd~V~iG 363 (496)
T 4fxs_A 297 VKVGIGPGSICTTRIVTGVGVP-QITAIADAAGVANEYGIP-VIA---DGGIRFSGDISKA----IAAGASCVMVG 363 (496)
T ss_dssp EEECSSCCTTBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCC-EEE---ESCCCSHHHHHHH----HHTTCSEEEES
T ss_pred EEECCCCCcCcccccccCCCcc-HHHHHHHHHHHhccCCCe-EEE---eCCCCCHHHHHHH----HHcCCCeEEec
Confidence 8763 11111111111222111 245556677777777775 443 3344555655443 35799988765
No 373
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=78.78 E-value=5.3 Score=39.60 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=74.9
Q ss_pred CCCCCHHHHHHHHHHHHHcCCcEEeccCcccc---cCHHHHHHHHHHHHHhCCCCcceeEEEee-cCCcchHHHHHHHHH
Q 013498 228 AGRSDRKFLYEILGEVIKVGATTLNIPDTVGI---TMPTEFGKLIADIKANTPGIENVVISTHC-QNDLGLSTANTIAGA 303 (442)
Q Consensus 228 asr~d~~~l~~~~~~~~~~Gad~I~laDT~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~-HNDlGLA~ANalaAl 303 (442)
.++.|.+-+.++++.+++.|++.|.++=|+|= +++++-.++++. .. .+ .++|-+++ +|+.--++..+..|-
T Consensus 41 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~--~g--rvpViaGvg~~st~eai~la~~A~ 115 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LV--KA--GIPVIVGTGAVNTASAVAHAVHAQ 115 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HH--HT--TCCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-Hh--CC--CCcEEEecCCCCHHHHHHHHHHHH
Confidence 36889999999999999999999999999986 888888888887 22 12 24555554 688888999999999
Q ss_pred HhCCCEEEecccccccccCcccHHHHHHHHH
Q 013498 304 CAGARQVEVTINGIGERAGNASLEEVVMAFK 334 (442)
Q Consensus 304 ~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~ 334 (442)
++||+.+=+..--.-.. .+-++++..++
T Consensus 116 ~~Gadavlv~~P~y~~~---~s~~~l~~~f~ 143 (344)
T 2hmc_A 116 KVGAKGLMVIPRVLSRG---SVIAAQKAHFK 143 (344)
T ss_dssp HHTCSEEEECCCCSSST---TCHHHHHHHHH
T ss_pred hcCCCEEEECCCccCCC---CCHHHHHHHHH
Confidence 99999987754433221 24566665544
No 374
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=78.60 E-value=6.2 Score=35.78 Aligned_cols=70 Identities=17% Similarity=0.280 Sum_probs=48.6
Q ss_pred HHHHHHHcCCcEEeccCcccccCH-HHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccc
Q 013498 239 ILGEVIKVGATTLNIPDTVGITMP-TEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 239 ~~~~~~~~Gad~I~laDT~G~~~P-~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
.++.+.++|++.|.+- +.-...| ..+.++++.+++.+|+ .++.+-+|+ ...+..+.++|+++|-++..|.
T Consensus 80 ~i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~---~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~ 150 (223)
T 1y0e_A 80 EVDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPN---VEIMADIAT-----VEEAKNAARLGFDYIGTTLHGY 150 (223)
T ss_dssp HHHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTT---SEEEEECSS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCC---ceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcC
Confidence 3455678999998763 3223345 4667899999998874 556665664 4456778999999997665554
No 375
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=78.48 E-value=55 Score=32.38 Aligned_cols=190 Identities=11% Similarity=0.052 Sum_probs=101.9
Q ss_pred HHHHHHHhHcCCCEEEEcc--C----CC-Ch-----------------hHH-HHHHHHHHHhcccccccCCccceEeeec
Q 013498 104 LDIARQLAKLGVDIIEAGF--P----AA-SK-----------------EDF-EAVRTIAKEVGNAVDAESGYVPVICGLS 158 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG~--p----~~-~~-----------------~d~-e~v~~l~~~~~~~~~~~~~l~~~i~~~~ 158 (442)
.+.++.|+++|+-.||+|. | .. .| .-. .+++.+.+. ... . . .|.+.-+.
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~-~~~-~---~-~pvivsI~ 134 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQ-HDY-G---K-KPLFLSMS 134 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHT-CCT-T---T-CCEEEEEC
T ss_pred HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHH-hhc-C---C-CcEEEEec
Confidence 3557888899999999973 1 10 00 012 244444432 110 0 1 23343332
Q ss_pred ccchhhHHHHHHHHH---hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCCCCCCCH
Q 013498 159 RCNERDIKTAWEAVK---YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDR 233 (442)
Q Consensus 159 r~~~~dI~~a~e~l~---~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~edasr~d~ 233 (442)
-.+.+|...+.+.+. ..|.+.|.+-+++....-...+..+++ .+.++++.+++. ... .|-+.+ + .|.
T Consensus 135 G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e----~~~~il~av~~~~~~PV~vKi~p-~---~d~ 206 (354)
T 4ef8_A 135 GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFD----AMRQCLTAVSEVYPHSFGVKMPP-Y---FDF 206 (354)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHH----HHHHHHHHHHHHCCSCEEEEECC-C---CSH
T ss_pred cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHH----HHHHHHHHHHHhhCCCeEEEecC-C---CCH
Confidence 235677766665554 346787777665432110011222333 334444444443 233 234444 2 367
Q ss_pred HHHHHHHHHHHHcC-CcEEeccCccc---------------------ccC----HHHHHHHHHHHHHhCCCCcceeEEEe
Q 013498 234 KFLYEILGEVIKVG-ATTLNIPDTVG---------------------ITM----PTEFGKLIADIKANTPGIENVVISTH 287 (442)
Q Consensus 234 ~~l~~~~~~~~~~G-ad~I~laDT~G---------------------~~~----P~~v~~li~~l~~~~p~~~~v~i~~H 287 (442)
+.+.++++.+.++| +|.|.+..|+| .+. +..-.++|..+++..++ ++|..=
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~---ipII~~ 283 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPG---KLIFGC 283 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTT---SEEEEE
T ss_pred HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCC---CCEEEE
Confidence 77888999999998 99998765542 111 13446788888887653 555432
Q ss_pred ecCCcchHHHHHHHHHHhCCCEEEec
Q 013498 288 CQNDLGLSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 288 ~HNDlGLA~ANalaAl~aGa~~vd~T 313 (442)
.==.. ...++.++.+||+.|...
T Consensus 284 GGI~s---~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 284 GGVYT---GEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp SCCCS---HHHHHHHHHHTEEEEEEC
T ss_pred CCcCC---HHHHHHHHHcCCCEEEEh
Confidence 22111 346677788899887654
No 376
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=78.48 E-value=41 Score=30.86 Aligned_cols=123 Identities=14% Similarity=0.084 Sum_probs=61.3
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCe--EEE-ccC--CCCCCCH-----
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDD--VEF-SPE--DAGRSDR----- 233 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~--V~f-~~e--dasr~d~----- 233 (442)
+++.+++.++..|.+.|.++... + +....-..+. +.+.++.+.+++.|++. +.. .+. +-...++
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~-~-~~~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~ 86 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHN-A-RSWSAKLPSD----EAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQK 86 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCC-C-SSSCCCCCCH----HHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCC-c-ccccccCCCH----HHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHH
Confidence 34445555566789988885421 1 0000001121 23345556677788851 332 111 1111232
Q ss_pred --HHHHHHHHHHHHcCCcEEeccC--cccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCc
Q 013498 234 --KFLYEILGEVIKVGATTLNIPD--TVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDL 292 (442)
Q Consensus 234 --~~l~~~~~~~~~~Gad~I~laD--T~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDl 292 (442)
+.+.+.++.+.+.|++.|.+.= ..+....+...++++.+++......++.|.+|.|+..
T Consensus 87 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~ 149 (287)
T 2x7v_A 87 SVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQK 149 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCC
Confidence 4677778888888998887621 1121122233444455544322112478888888753
No 377
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=78.40 E-value=51 Score=31.99 Aligned_cols=172 Identities=13% Similarity=0.063 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccch-hhHHHHHHHHHhCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNE-RDIKTAWEAVKYAKR 177 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~-~dI~~a~e~l~~~g~ 177 (442)
+.++.+++++.+.. .+..+++|.|-....-.+.++.|.+..+. +.+..+-+... +-+..+.+.+...|+
T Consensus 35 ~~~eal~l~~~l~~-~v~~vKVG~~lf~~~G~~~V~~Lk~~~g~---------~IflDlKl~DIpnTv~~av~~~a~lGa 104 (303)
T 3ru6_A 35 TKEECLQLAKELKN-LDIWLKVGLRAYLRDGFKFIEELKKVDDF---------KIFLDLKFHDIPNTMADACEEVSKLGV 104 (303)
T ss_dssp SHHHHHHHHHHTTT-SSCEEEECHHHHHHHTHHHHHHHHHHCCC---------EEEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHhCC-CccEEEeCHHHHHHhCHHHHHHHHHhhCC---------CEEEEeeeccCchhHHHHHHHHHhcCC
Confidence 66777888887753 48999999653211123567777664211 23444444332 223445555666799
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC--eEEEccCCCCCC----------C-HHHHHHHHHHHH
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCD--DVEFSPEDAGRS----------D-RKFLYEILGEVI 244 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~--~V~f~~edasr~----------d-~~~l~~~~~~~~ 244 (442)
+.+.+.....+ +.+..+++.+++.|.. .+.+... ++-. + .+.+.++++.+.
T Consensus 105 D~vTVHa~~G~---------------~~m~aa~e~a~~~~~~~~llaVtvL-TS~s~~~l~~l~~~~~~e~V~~lA~~a~ 168 (303)
T 3ru6_A 105 DMINIHASAGK---------------IAIQEVMTRLSKFSKRPLVLAVSAL-TSFDEENFFSIYRQKIEEAVINFSKISY 168 (303)
T ss_dssp SEEEEEGGGCH---------------HHHHHHHHHHTTSSSCCEEEEECSC-TTCCHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred CEEEEeccCCH---------------HHHHHHHHHHHhcCCCceEEEEEEe-cCCCHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 98877544332 3445566666665531 1223221 1111 1 244566778888
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeE---EEeecCCcchH----HHHHHHHHHhCCCEE
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVI---STHCQNDLGLS----TANTIAGACAGARQV 310 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i---~~H~HNDlGLA----~ANalaAl~aGa~~v 310 (442)
++|++.+.- .|.+ +..+|+.+|+ +..+ |+-.-. -.+. ++|.-.|+++||+.+
T Consensus 169 ~~G~dGvV~-------s~~E----~~~IR~~~~~--~fl~VTPGIr~qG-~~~~DQ~Rv~t~~~a~~aGAd~i 227 (303)
T 3ru6_A 169 ENGLDGMVC-------SVFE----SKKIKEHTSS--NFLTLTPGIRPFG-ETNDDQKRVANLAMARENLSDYI 227 (303)
T ss_dssp HTTCSEEEC-------CTTT----HHHHHHHSCT--TSEEEECCCCTTC---------CCSHHHHHHTTCSEE
T ss_pred HcCCCEEEE-------CHHH----HHHHHHhCCC--ccEEECCCcCccc-CCcccccccCCHHHHHHcCCCEE
Confidence 899886432 4555 3456666543 1111 222211 0111 236678899999986
No 378
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=78.35 E-value=12 Score=35.66 Aligned_cols=126 Identities=8% Similarity=0.021 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecC-ChHHHHHHhCCCHHHH-HHHHHHHHHHHHHcCCCeEEEccCCC-C---CC----C
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIAT-SGIHMEHKLRKTKQQV-VEIARSMVKFARSLGCDDVEFSPEDA-G---RS----D 232 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~-Sd~h~~~~l~~s~~e~-l~~~~~~v~~ar~~G~~~V~f~~eda-s---r~----d 232 (442)
.+++.+++.++.+|.+.|.++..- ... ...+..++.. -+.+.++.+.+++.|+..+.+..... . .. .
T Consensus 36 ~~l~~~l~~aa~~G~~~VEl~~~~~~~~---~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~ 112 (305)
T 3obe_A 36 QDMPNGLNRLAKAGYTDLEIFGYREDTG---KFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKF 112 (305)
T ss_dssp TTHHHHHHHHHHHTCCEEEECCBCTTTC---CBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecccccccc---cccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHH
Confidence 377888888888899999987431 000 0011211100 00234455667889986334433211 1 11 1
Q ss_pred HHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCC--CCcceeEEEeecCC
Q 013498 233 RKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVVISTHCQND 291 (442)
Q Consensus 233 ~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p--~~~~v~i~~H~HND 291 (442)
.+.+.+.++.+.+.|++.|.++-.-....+.....+++.+++..+ ...++.|.+|.|+.
T Consensus 113 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 113 DEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 356778888888999999987622222355666656655543211 00148899999985
No 379
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=78.25 E-value=3.8 Score=40.63 Aligned_cols=86 Identities=17% Similarity=0.196 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCcEEeccCcc-cccCHHHHH--------HHHHHHH-HhCC-CCcceeEEEeecCCcchHHHHHHHHHH
Q 013498 236 LYEILGEVIKVGATTLNIPDTV-GITMPTEFG--------KLIADIK-ANTP-GIENVVISTHCQNDLGLSTANTIAGAC 304 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~-G~~~P~~v~--------~li~~l~-~~~p-~~~~v~i~~H~HNDlGLA~ANalaAl~ 304 (442)
+.+.++...++|++.|.+.|+. |.+.|..+. ++++.++ +..| +..++++.+|+.++ +.-+. .-.+
T Consensus 199 ~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l~~ 274 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---ELAQ 274 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HHTT
T ss_pred HHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HHHh
Confidence 4445556667899999999865 566887654 4455666 4322 10025688888876 33222 2336
Q ss_pred hCCCEEEecccccccccCcccHHHHHHHH
Q 013498 305 AGARQVEVTINGIGERAGNASLEEVVMAF 333 (442)
Q Consensus 305 aGa~~vd~Tv~GlGeraGNa~lEevv~~L 333 (442)
.|++.++.-. ..+++++...+
T Consensus 275 ~g~d~i~~d~--------~~dl~~a~~~~ 295 (367)
T 1r3s_A 275 AGYEVVGLDW--------TVAPKKARECV 295 (367)
T ss_dssp SSCSEEECCT--------TSCHHHHHHHH
T ss_pred cCCCEEEeCC--------CCCHHHHHHHc
Confidence 7999886532 25666665444
No 380
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.16 E-value=11 Score=39.25 Aligned_cols=67 Identities=18% Similarity=0.212 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
.+.++.+.++|+|.|.+-.+.| .+..+.++++.+++.+|+ +++..-.=. ...-+..++++||+.|.+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~---~~vi~g~v~----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPS---LNIIAGNVA----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTT---SEEEEEEEC----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCC---ceEEeeeec----cHHHHHHHHHhCCCEEEE
Confidence 4567788899999999876654 467788999999999975 445442211 245578899999999986
No 381
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=77.99 E-value=13 Score=36.67 Aligned_cols=106 Identities=15% Similarity=0.239 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhH--cCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHH
Q 013498 95 GATLTSKEKLDIARQLAK--LGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAV 172 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~--~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l 172 (442)
+-.++.++-+++++.|.+ .|++.||=.+| +++++..+.+.+. .-+|.+.+=.-.+.++++..++.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~ipIa~dE~~~~~~~~~~~i~~- 259 (366)
T 1tkk_A 193 NQGWRPKEAVTAIRKMEDAGLGIELVEQPVH---KDDLAGLKKVTDA---------TDTPIMADESVFTPRQAFEVLQT- 259 (366)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEEEECCSC---TTCHHHHHHHHHH---------CSSCEEECTTCCSHHHHHHHHHH-
T ss_pred CCCCCHHHHHHHHHHHhhcCCCceEEECCCC---cccHHHHHHHHhh---------CCCCEEEcCCCCCHHHHHHHHHh-
Q ss_pred HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +..+-.-+..+.++++.|+++|+. +.++....+
T Consensus 260 --~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 300 (366)
T 1tkk_A 260 --RSADLINI-------------KLMKAGGISGAEKINAMAEACGVE-CMVGSMIET 300 (366)
T ss_dssp --TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCC-EEECCSSCC
T ss_pred --CCCCEEEe-------------ehhhhcCHHHHHHHHHHHHHcCCc-EEecCcccc
No 382
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=77.92 E-value=30 Score=35.35 Aligned_cols=205 Identities=15% Similarity=0.103 Sum_probs=123.4
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCC-hH---HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC---------
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATS-GI---HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--------- 229 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~S-d~---h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas--------- 229 (442)
..+.+.++.+..+|+..|+|-..+. +- |+..+-=.+.++.+++++.+...++..|.+.+.+.=.|+-
T Consensus 167 ~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~ 246 (435)
T 3lg3_A 167 LNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDC 246 (435)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCC
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccccccccc
Confidence 3455556666667999999987764 21 1111111378899999988877777677652222112320
Q ss_pred --------------------CCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 013498 230 --------------------RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 289 (442)
Q Consensus 230 --------------------r~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~H 289 (442)
+...+..++-+++..+ |||.|.+- .|.-.++++.++.+.++..+|. ..+.+-+-
T Consensus 247 d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E--~~~~~~~ei~~f~~~v~~~~P~---~~La~~~s 320 (435)
T 3lg3_A 247 DPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCE--TSTPDLALAKRFADAVHAQFPG---KLLAYNCS 320 (435)
T ss_dssp CGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHHHSTT---CEEEEECC
T ss_pred ccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEec--CCCCCHHHHHHHHHHhccccCC---eEEEeCCC
Confidence 1446666666667777 99999872 2567899999999999988884 34444333
Q ss_pred CCcc----hH---HHH-HHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHH
Q 013498 290 NDLG----LS---TAN-TIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVE 361 (442)
Q Consensus 290 NDlG----LA---~AN-alaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~ 361 (442)
-.+. |. +++ .-.--+.|+.++-.++.| =|+-|.++++++..+...+ |.. .......-.++..
T Consensus 321 Psfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~--~raa~~a~~~~a~~~~~~~-----gm~---ayve~~Q~~e~~~ 390 (435)
T 3lg3_A 321 PSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAG--IHSMWFNMFDLAHAYAQGE-----GMK---HYVEKVQQPEFAS 390 (435)
T ss_dssp SSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHH--HHHHHHHHHHHHHHHHHSC-----HHH---HHHHHTHHHHHTT
T ss_pred CCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHH--HHHHHHHHHHHHHHHHhhC-----CHH---HHHHHHHHHHHhh
Confidence 2222 11 111 122335798888766655 4778888899888777621 110 0111111111123
Q ss_pred HHhCCCCCCCCccccchhhhhc
Q 013498 362 EYTGLHVQPHKAIVGANAFAHE 383 (442)
Q Consensus 362 ~~~g~~i~~~~pivG~~aF~h~ 383 (442)
+..|+..-.|+-.+|.+.|-.-
T Consensus 391 ~~~g~~~~~hq~~~G~~y~d~~ 412 (435)
T 3lg3_A 391 VDRGYTFASHQQEVGTGYFDKV 412 (435)
T ss_dssp GGGTCCTTSHHHHTTHHHHHHH
T ss_pred hccCceeeecccccccchHHHH
Confidence 3678888788889998888543
No 383
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=77.86 E-value=9.1 Score=37.02 Aligned_cols=59 Identities=17% Similarity=0.233 Sum_probs=49.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEeccCccccc-CHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 013498 226 EDAGRSDRKFLYEILGEVIKVGATTLNIPDTVGIT-MPTEFGKLIADIKANTPGIENVVISTHCQ 289 (442)
Q Consensus 226 edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G~~-~P~~v~~li~~l~~~~p~~~~v~i~~H~H 289 (442)
-|-.+..++.+.+.++.+.+.|.|.|-+. |.|+. ..+.+.++++.+|+.++ +|+-.|+=
T Consensus 45 iDPdK~~~~~~~~~~~~~~~sGtDai~VG-S~~vt~~~~~~~~~v~~ik~~~~----lPvil~fP 104 (286)
T 3vk5_A 45 IDPFKVPVTEAVEKAAELTRLGFAAVLLA-STDYESFESHMEPYVAAVKAATP----LPVVLHFP 104 (286)
T ss_dssp ECTTTSCHHHHHHHHHHHHHTTCSCEEEE-CSCCSSHHHHHHHHHHHHHHHCS----SCEEEECC
T ss_pred ECCCCCCcHHHHHHHHHHHhcCCCEEEEc-cCCCCcchHHHHHHHHHHHHhCC----CCEEEECC
Confidence 36677888999999999999999999999 99883 38889999999999773 67777665
No 384
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=77.68 E-value=17 Score=37.17 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=41.1
Q ss_pred EEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc------------ccCHHHHHHHHHHHHH
Q 013498 221 VEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG------------ITMPTEFGKLIADIKA 274 (442)
Q Consensus 221 V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G------------~~~P~~v~~li~~l~~ 274 (442)
|.+..+ .+.-++..+.+.++.+.++|+-.|.|-|.++ +..++++.+.|++.++
T Consensus 155 viaD~D-tGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~ 219 (435)
T 3lg3_A 155 IVADAE-AGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARL 219 (435)
T ss_dssp EEEECT-TCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHH
T ss_pred eEEECC-CCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHH
Confidence 677774 4555556788999999999999999999985 2456777777777764
No 385
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=77.51 E-value=34 Score=33.01 Aligned_cols=149 Identities=13% Similarity=0.130 Sum_probs=88.9
Q ss_pred HHHHHhHcCCCEEEEccCCCCh-----------------hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHH
Q 013498 106 IARQLAKLGVDIIEAGFPAASK-----------------EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTA 168 (442)
Q Consensus 106 ia~~L~~~GV~~IEvG~p~~~~-----------------~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a 168 (442)
+.+.|.++|+.-+ +=||..+- ++.+.++...+. ++....++ -+.++.+..
T Consensus 113 ~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~---------gL~Ti~~v---~~~eeA~am 179 (286)
T 2p10_A 113 FLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL---------DLLTTPYV---FSPEDAVAM 179 (286)
T ss_dssp HHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT---------TCEECCEE---CSHHHHHHH
T ss_pred HHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC---------CCeEEEec---CCHHHHHHH
Confidence 3499999999999 77883321 123344433332 33322232 255555544
Q ss_pred HHHHHhCCCCEEEEeecCChH-HHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 169 WEAVKYAKRPRIHTFIATSGI-HMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~Sd~-h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
.+ +|.|.|.+..+..-- .+-..-..|.++..+.+.+.++.+++...+ |.+-+--..=++++.+..+++.. .|
T Consensus 180 A~----agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpd-vivLc~gGpIstpeDv~~~l~~t--~G 252 (286)
T 2p10_A 180 AK----AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDD-IIILSHGGPIANPEDARFILDSC--QG 252 (286)
T ss_dssp HH----HTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSC-CEEEEESTTCCSHHHHHHHHHHC--TT
T ss_pred HH----cCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCC-cEEEecCCCCCCHHHHHHHHhcC--CC
Confidence 44 388988887763210 111233457888888888999999998764 44433122456777776655321 28
Q ss_pred CcEEeccCcccccCHHH-HHHHHHHHHH
Q 013498 248 ATTLNIPDTVGITMPTE-FGKLIADIKA 274 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~-v~~li~~l~~ 274 (442)
++-+..+=++-.+.|++ +.++++.+|.
T Consensus 253 ~~G~~gASsier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 253 CHGFYGASSMERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp CCEEEESHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEeehhhhcCCHHHHHHHHHHHHHh
Confidence 89999888887777665 4677777765
No 386
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=77.31 E-value=12 Score=37.43 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=67.1
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++.+++++.|++.|+..||=-+| ++|++.++.+++... +|...+=.-.+..|++..++. .
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~~~~---~ 267 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIEQPIS---RNNRAGMVRLNASSP---------APIMADESIECVEDAFNLARE---G 267 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEECCBC---TTCHHHHHHHHHHCS---------SCEEESTTCSSHHHHHHHHHH---T
T ss_pred CCCCHHHHHHHHHHHhhcCcCeeeCCCC---ccCHHHHHHHHHhCC---------CCEEeCCCcCCHHHHHHHHHc---C
Confidence 4478999999999999999999996433 557788888877532 233322222355677666654 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
.++.|.+=+ + +. .-+..++++++.|+..|+. +..+.+
T Consensus 268 ~~d~v~~k~--~------~~-----GGit~~~~i~~~A~~~gi~-~~~~~~ 304 (382)
T 3dgb_A 268 AASVFALKI--A------KN-----GGPRATLRTAAIAEAAGIG-LYGGTM 304 (382)
T ss_dssp CCSEEEECH--H------HH-----TSHHHHHHHHHHHHHHTCE-EEECCS
T ss_pred CCCEEEecc--c------cc-----CCHHHHHHHHHHHHHcCCe-EeecCC
Confidence 456655411 1 11 2256778899999999985 766653
No 387
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=77.31 E-value=18 Score=36.07 Aligned_cols=193 Identities=13% Similarity=0.094 Sum_probs=112.8
Q ss_pred CCCHHHHHHHHHHHhHcCCCEE-EEccCCC---------ChhH-------HHHHHHHHHHhcccccccCCccceEeeecc
Q 013498 97 TLTSKEKLDIARQLAKLGVDII-EAGFPAA---------SKED-------FEAVRTIAKEVGNAVDAESGYVPVICGLSR 159 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~I-EvG~p~~---------~~~d-------~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r 159 (442)
..+.+....+++.-.+.+-+.| ++ ++.. .... ...++.+++.. -+|+..=+=-
T Consensus 39 v~n~e~~~Avl~AAee~~sPvIlq~-s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~---------~VPVaLHlDH 108 (357)
T 3qm3_A 39 VVGTDSINAVLEAAKKVNSPVIIQF-SNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAY---------GVPVILHTDH 108 (357)
T ss_dssp CCSHHHHHHHHHHHHHHTSCEEEEE-CHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHH---------TCEEEEEECC
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEEc-ChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHC---------CCcEEEECCC
Confidence 3678999999999999999976 44 2210 0000 11244454432 1343332222
Q ss_pred cc---hhhHHHHHHHH-------HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE--c---
Q 013498 160 CN---ERDIKTAWEAV-------KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF--S--- 224 (442)
Q Consensus 160 ~~---~~dI~~a~e~l-------~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f--~--- 224 (442)
+. .+.++.++++. ..+|...|.+ -.| ..+.+|+++..++.+++|+..|.. |+- +
T Consensus 109 g~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMi--DgS--------~lp~eENI~~Tk~vv~~ah~~gvs-VEaELG~ig 177 (357)
T 3qm3_A 109 AARKLLPWIDGLIEANAQYKKTHGQALFSSHML--DLS--------EESLEENLSTCEVYLQKLDALGVA-LEIELGCTG 177 (357)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEC--CCT--------TSCHHHHHHHHHHHHHHHHHHTCE-EEEECCCCC
T ss_pred CCccchHHHHHHHHHhHHHHhhhcCCCCCEEEE--eCC--------CCCHHHHHHHHHHHHHHHHHcCCe-EEEEeeeec
Confidence 22 24466666543 1246766543 333 247799999999999999999983 643 2
Q ss_pred -cCC----------CCCCCHHHHHHHHHHHHHc-CCcEEecc--Cccccc-------CHHHHHHHHHHHHHhC--CCCcc
Q 013498 225 -PED----------AGRSDRKFLYEILGEVIKV-GATTLNIP--DTVGIT-------MPTEFGKLIADIKANT--PGIEN 281 (442)
Q Consensus 225 -~ed----------asr~d~~~l~~~~~~~~~~-Gad~I~la--DT~G~~-------~P~~v~~li~~l~~~~--p~~~~ 281 (442)
-|| ...++|+...+++++.-.. |+|.+-++ -.=|.. .|+...++-+.+++.+ ++..+
T Consensus 178 G~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~ 257 (357)
T 3qm3_A 178 GEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKP 257 (357)
T ss_dssp C-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCC
T ss_pred cccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCC
Confidence 133 2368999998888765322 45654443 222433 4555666656666654 21013
Q ss_pred eeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 282 VVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 282 v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
+||.+|.=. |.....-..|+..|+.-|+.
T Consensus 258 vpLVlHGgS--G~p~e~i~~ai~~GV~KiNi 286 (357)
T 3qm3_A 258 INFVFHGGS--GSELKDIKNAVSYGVIKMNI 286 (357)
T ss_dssp SCEEECSCT--TCCHHHHHHHHHTTEEEEEE
T ss_pred CcEEEeCCC--CCCHHHHHHHHHCCceEEEe
Confidence 778877654 66777777888888777654
No 388
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=77.27 E-value=13 Score=35.39 Aligned_cols=116 Identities=14% Similarity=0.041 Sum_probs=68.0
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCC-------CC-------
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPED-------AG------- 229 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ed-------as------- 229 (442)
+++..++.++.+|.+.|.++.... + .-...+ +.++.+.+++.|++.+.+.... ..
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~--~--~~~~~~-------~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~ 98 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGK--G--AIGGVP-------MMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKY 98 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEET--T--EETTEE-------HHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSC
T ss_pred CHHHHHHHHHHcCCCEEEeccccC--c--ccCCCC-------HHHHHHHHHHcCCeEEEEecccccccccCccccccccc
Confidence 788888888889999999864210 0 001122 2344566778998633443211 00
Q ss_pred -----CCCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCC--CCccee--EEEeecC
Q 013498 230 -----RSDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTP--GIENVV--ISTHCQN 290 (442)
Q Consensus 230 -----r~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p--~~~~v~--i~~H~HN 290 (442)
+...+.+.+.++.+.+.|++.|.+.-......++....+++.+++... ...++. |.+|.|+
T Consensus 99 ~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 99 SKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred chhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 011456778888889999999988521112355666555555543211 001488 9999997
No 389
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=77.26 E-value=58 Score=32.01 Aligned_cols=195 Identities=15% Similarity=0.156 Sum_probs=111.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEE-c----cCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhh-HHHHHH
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEA-G----FPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERD-IKTAWE 170 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEv-G----~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~d-I~~a~e 170 (442)
.+..+.-.++++.|.+.||+-|=+ | ++..+.+|...+-+. ... +.+|.|++.+..+.++ |+.+-.
T Consensus 43 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~-------grvpViaGvg~~st~eai~la~~ 113 (344)
T 2hmc_A 43 TPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVK-------AGIPVIVGTGAVNTASAVAHAVH 113 (344)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHH-------TTCCEEEECCCSSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhC-------CCCcEEEecCCCCHHHHHHHHHH
Confidence 378888899999999999998766 4 466666665433222 211 2357888877655443 555433
Q ss_pred HHHhCCCCEEEEeecCChHHHHHHhC-CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC--CCCHHHHHHHHHHHHHcC
Q 013498 171 AVKYAKRPRIHTFIATSGIHMEHKLR-KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 171 ~l~~~g~~~v~i~~~~Sd~h~~~~l~-~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas--r~d~~~l~~~~~~~~~~G 247 (442)
+ ..+|++.+-+..|-. ++ .+.+++++-....++. .-++.-+-++.. .+ ..+++.+.+++ .+.
T Consensus 114 A-~~~Gadavlv~~P~y-------~~~~s~~~l~~~f~~IA~a--a~~lPiilYn~P-~tg~~l~~e~~~~L~---a~~- 178 (344)
T 2hmc_A 114 A-QKVGAKGLMVIPRVL-------SRGSVIAAQKAHFKAILSA--APEIPAVIYNSP-YYGFATRADLFFALR---AEH- 178 (344)
T ss_dssp H-HHHTCSEEEECCCCS-------SSTTCHHHHHHHHHHHHHH--STTSCEEEEEBG-GGTBCCCHHHHHHHH---HHC-
T ss_pred H-HhcCCCEEEECCCcc-------CCCCCHHHHHHHHHHHHhh--CCCCcEEEEecC-ccCCCcCHHHHHHHH---hcC-
Confidence 3 446999887765532 23 4666655554444331 234554555655 33 45777776662 232
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH-HhCCCEEEecccccccccCcccH
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA-CAGARQVEVTINGIGERAGNASL 326 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl-~aGa~~vd~Tv~GlGeraGNa~l 326 (442)
...+.+.||.| |..+.+ +..+++..++ +.. -+-..+++ .+.++ ..|++.+ +.| .+|...
T Consensus 179 pnIvGiKdssg---p~d~~~-~~~~~~~~~~--~f~-v~~G~D~~------~l~~l~~~Ga~G~---is~----~anv~P 238 (344)
T 2hmc_A 179 KNLVGFKEFGG---PADMRY-AAENITSRDD--EVT-LMIGVDTA------VVHGFVNCGATGA---ITG----IGNVLP 238 (344)
T ss_dssp TTEEEEEECSC---HHHHHH-HHHHTSCSSS--SCE-EEECSGGG------HHHHHHHSCCCEE---EES----GGGTSH
T ss_pred CCEEEEEcCCC---CCCHHH-HHHHHHHcCC--CEE-EEECcHHH------HHHHHHHcCCCEE---EeC----HHHhhH
Confidence 67999999998 423332 2233333332 122 22333332 34566 7887643 332 456777
Q ss_pred HHHHHHHHh
Q 013498 327 EEVVMAFKC 335 (442)
Q Consensus 327 Eevv~~L~~ 335 (442)
+.++...+.
T Consensus 239 ~~~~~l~~a 247 (344)
T 2hmc_A 239 KEVIHLCKL 247 (344)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777665554
No 390
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=77.25 E-value=8.5 Score=39.63 Aligned_cols=136 Identities=18% Similarity=0.261 Sum_probs=85.7
Q ss_pred CCCHHHHHHHHHH-HhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEee--ecccchhhHHHHHHHHH
Q 013498 97 TLTSKEKLDIARQ-LAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICG--LSRCNERDIKTAWEAVK 173 (442)
Q Consensus 97 ~fs~e~kl~ia~~-L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~--~~r~~~~dI~~a~e~l~ 173 (442)
.+|.+|.+++++. +++.++..||=.++ ++||+.++.+.+..+.. ++ |++ +...+.++++.+++.
T Consensus 280 ~~t~~Elid~y~~lle~ypIv~IEDPl~---~dD~eg~a~Lt~~lg~~-------iq-IvGDDl~vTn~~~i~~~Ie~-- 346 (452)
T 3otr_A 280 HLTGEKLKEVYEGWLKKYPIISVEDPFD---QDDFASFSAFTKDVGEK-------TQ-VIGDDILVTNILRIEKALKD-- 346 (452)
T ss_dssp EECHHHHHHHHHHHHHHSCEEEEECCSC---TTCHHHHHHHHHHHTTT-------SE-EEESTTTTTCHHHHHHHHHH--
T ss_pred cccHHHHHHHHHHHHhhhCceEEecCCC---hhhHHHHHHHHHhhCCC-------eE-EEeCccccCCHHHHHHHHhc--
Confidence 5899999999976 67789889998665 67899998888876532 12 232 223478888888775
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
--.+.|.+ .++ +.| + +-.+.++++.|++.|+. +.++. ..+.++..++ +..++..++.-|..
T Consensus 347 -~a~n~IlI--Kvn------QIG-g----ITEalka~~lA~~~G~~-vmvsh-rSGETeD~~i---AdLaVgl~~gqIKt 407 (452)
T 3otr_A 347 -KACNCLLL--KVN------QIG-S----VTEAIEACLLAQKSGWG-VQVSH-RSGETEDSFI---ADLVVGLRCGQIKS 407 (452)
T ss_dssp -TCCSEEEE--CHH------HHC-C----HHHHHHHHHHHHHTTCE-EEEEC-CSSCCSCCHH---HHHHHHTTCCEEEC
T ss_pred -CCCCEEEe--ecc------ccc-c----HHHHHHHHHHHHHcCCe-EEEeC-CCCCCchhHH---HHHHHHcCCCcccc
Confidence 12344433 221 122 2 45567899999999985 77766 2334444555 44556667777764
Q ss_pred cCcccccCHHHHHH
Q 013498 254 PDTVGITMPTEFGK 267 (442)
Q Consensus 254 aDT~G~~~P~~v~~ 267 (442)
. +.+.-+++.+
T Consensus 408 G---ap~rsER~aK 418 (452)
T 3otr_A 408 G---SPCRSERLCK 418 (452)
T ss_dssp C---CSCSHHHHHH
T ss_pred C---CCcchhHHHH
Confidence 2 2234455544
No 391
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=77.20 E-value=31 Score=32.76 Aligned_cols=196 Identities=12% Similarity=0.088 Sum_probs=104.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChh-HHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
.|-.+....+-+.+.+.|++.+-. .....++ +.+.++.+... .++ + .|..-..... ..++.+...
T Consensus 81 ~~~~~~~~gi~~~a~~~g~~~~~~-~~~~~~~~~~~~i~~l~~~---~vd---G---iIi~~~~~~~----~~~~~l~~~ 146 (344)
T 3kjx_A 81 MVFPEVLTGINQVLEDTELQPVVG-VTDYLPEKEEKVLYEMLSW---RPS---G---VIIAGLEHSE----AARAMLDAA 146 (344)
T ss_dssp SSHHHHHHHHHHHHTSSSSEEEEE-ECTTCHHHHHHHHHHHHTT---CCS---E---EEEECSCCCH----HHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEE-eCCCCHHHHHHHHHHHHhC---CCC---E---EEEECCCCCH----HHHHHHHhC
Confidence 355666777888889999987543 3222332 33455544432 111 2 1221111122 233444556
Q ss_pred CCCEEEEeec-CChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-ccCC-CCCCCHHHHHHHHHHHHHcCCcE--
Q 013498 176 KRPRIHTFIA-TSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPED-AGRSDRKFLYEILGEVIKVGATT-- 250 (442)
Q Consensus 176 g~~~v~i~~~-~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f-~~ed-asr~d~~~l~~~~~~~~~~Gad~-- 250 (442)
|++.|.+... .++.. .....+. .+....++++..++|...+.| +... ......+.+.-+.+.+.+.|.+.
T Consensus 147 ~iPvV~i~~~~~~~~~--~~V~~D~---~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~ 221 (344)
T 3kjx_A 147 GIPVVEIMDSDGKPVD--AMVGISH---RRAGREMAQAILKAGYRRIGFMGTKMPLDYRARKRFEGFTEVLGKNGVEIED 221 (344)
T ss_dssp SSCEEEEEECSSCCSS--EEEEECH---HHHHHHHHHHHHHHTCCSCCEEESSTTTCHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCEEEEeCCCCCCCC--CEEEECc---HHHHHHHHHHHHHCCCCeEEEEecCcccCccHHHHHHHHHHHHHHcCCCCCh
Confidence 8888766221 11100 0112222 344567778888888865544 2221 12223456666777888888642
Q ss_pred EeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCE-EEecccccc
Q 013498 251 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQ-VEVTINGIG 318 (442)
Q Consensus 251 I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~-vd~Tv~GlG 318 (442)
..+. .|-..++..++.+..+.+..|+++ .+=|.|| .+|+.-..++-++|.+. =|.+|.|++
T Consensus 222 ~~~~--~~~~~~~~~~~~~~~ll~~~~~~~----ai~~~nd-~~A~g~~~al~~~g~~vP~disvvg~D 283 (344)
T 3kjx_A 222 REFY--SGGSALAKGREMTQAMLERSPDLD----FLYYSND-MIAAGGLLYLLEQGIDIPGQIGLAGFN 283 (344)
T ss_dssp EEEC--SSCCCHHHHHHHHHHHHHHSTTCC----EEEESSH-HHHHHHHHHHHHTTCCTTTTCEEECSB
T ss_pred heEE--eCCCCHHHHHHHHHHHHhcCCCCC----EEEECCH-HHHHHHHHHHHHcCCCCCCceEEEEEC
Confidence 2221 245667777888877776665432 3447776 45555555666788753 367777776
No 392
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=77.17 E-value=39 Score=29.92 Aligned_cols=171 Identities=12% Similarity=0.054 Sum_probs=83.3
Q ss_pred HHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCCCCCCC-HHHHHHHHHHHH
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPEDAGRSD-RKFLYEILGEVI 244 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~edasr~d-~~~l~~~~~~~~ 244 (442)
.++.+.. +++.+++-.+. . ..++ .+.++..|+. +.. +.+... ..| ++. +++.+.
T Consensus 18 ~~~~~~~-~v~~iev~~~~----~-~~~g----------~~~i~~l~~~~~~~~-i~~~l~---~~di~~~---~~~~a~ 74 (207)
T 3ajx_A 18 LAGKVAE-YVDIIELGTPL----I-KAEG----------LSVITAVKKAHPDKI-VFADMK---TMDAGEL---EADIAF 74 (207)
T ss_dssp HHHHHGG-GCSEEEECHHH----H-HHHC----------THHHHHHHHHSTTSE-EEEEEE---ECSCHHH---HHHHHH
T ss_pred HHHHhhc-cCCEEEECcHH----H-HhhC----------HHHHHHHHHhCCCCe-EEEEEE---ecCccHH---HHHHHH
Confidence 3444444 67888774432 1 1223 2345555555 443 443332 123 443 457788
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccccccCcc
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIGERAGNA 324 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlGeraGNa 324 (442)
++|+|.|.+-+..| +..+.++++.+++. + ..+++-+|+ ...-.....++.+.|+++|-....-.+...|..
T Consensus 75 ~~Gad~v~vh~~~~---~~~~~~~~~~~~~~--g---~~~gv~~~s-~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~ 145 (207)
T 3ajx_A 75 KAGADLVTVLGSAD---DSTIAGAVKAAQAH--N---KGVVVDLIG-IEDKATRAQEVRALGAKFVEMHAGLDEQAKPGF 145 (207)
T ss_dssp HTTCSEEEEETTSC---HHHHHHHHHHHHHH--T---CEEEEECTT-CSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTC
T ss_pred hCCCCEEEEeccCC---hHHHHHHHHHHHHc--C---CceEEEEec-CCChHHHHHHHHHhCCCEEEEEecccccccCCC
Confidence 89999998877665 34555666666654 1 345665652 211111122334569999833221112234443
Q ss_pred cHHHHHHHHHhccccccCCccCCCChhHHHHHHHHHHHHhCCCCCCCCccccchhhh
Q 013498 325 SLEEVVMAFKCRGEHILGGLYTGINTRHIVMASKMVEEYTGLHVQPHKAIVGANAFA 381 (442)
Q Consensus 325 ~lEevv~~L~~~g~~~~~G~~tgidl~~L~~ls~~v~~~~g~~i~~~~pivG~~aF~ 381 (442)
..++.+..+... +....+..||+++.+.++. + .| .+.-+||...|.
T Consensus 146 ~~~~~i~~~~~~--~~pi~v~GGI~~~~~~~~~---~--aG----ad~vvvGsaI~~ 191 (207)
T 3ajx_A 146 DLNGLLAAGEKA--RVPFSVAGGVKVATIPAVQ---K--AG----AEVAVAGGAIYG 191 (207)
T ss_dssp CTHHHHHHHHHH--TSCEEEESSCCGGGHHHHH---H--TT----CSEEEESHHHHT
T ss_pred chHHHHHHhhCC--CCCEEEECCcCHHHHHHHH---H--cC----CCEEEEeeeccC
Confidence 332222222210 1111345678877665542 1 12 334567766664
No 393
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=77.03 E-value=4 Score=36.63 Aligned_cols=69 Identities=14% Similarity=0.149 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
.+++...++++.+.+.|++.|.+.=. +| ...+.++.+|+.+|. +..|++....+. .-+..|+++||++|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~----~~-~~~~~i~~ir~~~~~--~~~ig~~~v~~~----~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFT----VP-DADTVIKELSFLKEK--GAIIGAGTVTSV----EQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHTHHHHHT--TCEEEEESCCSH----HHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----Ch-hHHHHHHHHHHHCCC--CcEEEecccCCH----HHHHHHHHcCCCEE
Confidence 46788899999999999999876322 23 234568888887752 367887553332 34688899999999
No 394
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=77.03 E-value=10 Score=37.57 Aligned_cols=105 Identities=18% Similarity=0.214 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|++.||=-.| +++++..+.+++. .-+|...+=.-.+..+++..++.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 257 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAEELCP---ADDVLSRRRLVGQ---------LDMPFIADESVPTPADVTREVLG--- 257 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEESCSC---TTSHHHHHHHHHH---------CSSCEEECTTCSSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEECCCC---cccHHHHHHHHHh---------CCCCEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++- -+..+++++..|+++|+. +..+.+..+
T Consensus 258 ~~~d~v~~-------------k~~~~-Git~~~~ia~~A~~~gi~-~~~~~~~es 297 (367)
T 3dg3_A 258 GSATAISI-------------KTART-GFTGSTRVHHLAEGLGLD-MVMGNQIDG 297 (367)
T ss_dssp TSCSEEEE-------------CHHHH-TTHHHHHHHHHHHHHTCE-EEECCSSCC
T ss_pred CCCCEEEe-------------ehhhh-hHHHHHHHHHHHHHcCCe-EEECCcCCc
No 395
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=76.97 E-value=18 Score=34.45 Aligned_cols=163 Identities=13% Similarity=0.095 Sum_probs=94.4
Q ss_pred CCcCCCCCCCCCCHHHHHHH---HHHHhHcCCCEEEEccCCC-ChhHHHHHHHHHHHhcccccccCCccceEeeecccc-
Q 013498 87 LRDGEQSPGATLTSKEKLDI---ARQLAKLGVDIIEAGFPAA-SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCN- 161 (442)
Q Consensus 87 LRDG~Q~~g~~fs~e~kl~i---a~~L~~~GV~~IEvG~p~~-~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~- 161 (442)
+|.| ++.++.+|...+ ++.+.++|++-+-+|+... ..=|.+.+++|.+..+. + + +.|-|+-
T Consensus 60 PR~G----dF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~-------~-~--vTFHRAfD 125 (256)
T 1twd_A 60 PRGG----DFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGP-------L-A--VTFHRAFD 125 (256)
T ss_dssp SSSS----CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTT-------S-E--EEECGGGG
T ss_pred CCCC----CCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCC-------C-c--EEEECchh
Confidence 4555 466776555444 4567889999999998633 22377888888876432 1 1 3355552
Q ss_pred -hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHH
Q 013498 162 -ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 240 (442)
Q Consensus 162 -~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~ 240 (442)
-.|...+++.+...|+++|-+.-.. .+..+.++.++++++++. .+. +..+. -..++.+.+++
T Consensus 126 ~~~d~~~ale~L~~lG~~rILTSG~~----------~~a~~g~~~L~~Lv~~a~--~i~-Im~Gg----Gv~~~Ni~~l~ 188 (256)
T 1twd_A 126 MCANPLYTLNNLAELGIARVLTSGQK----------SDALQGLSKIMELIAHRD--API-IMAGA----GVRAENLHHFL 188 (256)
T ss_dssp GCSCHHHHHHHHHHHTCCEEEECTTS----------SSTTTTHHHHHHHHTSSS--CCE-EEEES----SCCTTTHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCEEECCCCC----------CCHHHHHHHHHHHHHhhC--CcE-EEecC----CcCHHHHHHHH
Confidence 2466778888888899998754221 234566777888877644 342 43332 22223333332
Q ss_pred HHHHHcCCcEEecc------C--------------------cccccCHHHHHHHHHHHHHhCCCCcceeEEEeec
Q 013498 241 GEVIKVGATTLNIP------D--------------------TVGITMPTEFGKLIADIKANTPGIENVVISTHCQ 289 (442)
Q Consensus 241 ~~~~~~Gad~I~la------D--------------------T~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~H 289 (442)
+.|++.+-+. . +.....++.+++++..+.+... .++-|-|
T Consensus 189 ----~tGv~e~H~Sa~~~~~s~~~~~~~~v~mg~~~~~~~~~~~~td~~~V~~~~~~l~~~~~-----~~~~~~~ 254 (256)
T 1twd_A 189 ----DAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKGIIERHQA-----KLEHHHH 254 (256)
T ss_dssp ----HHTCSEEEECCEEEECCCCCCCC-------------CCEEEECHHHHHHHHHHHHHHHH-----C------
T ss_pred ----HcCCCeEeECCccccCCcccccccccccCcccccccccccccCHHHHHHHHHHHHHHHh-----hhhhccc
Confidence 4677766643 1 1123566778888888776653 3555555
No 396
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=76.95 E-value=4.7 Score=40.27 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|.+.|++.||-.+| +++++..+.+.+. .-+|.+.+=.-.+.++++..++.
T Consensus 216 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPI~~dE~~~~~~~~~~~i~~--- 280 (388)
T 2nql_A 216 HWNQTPERALELIAEMQPFDPWFAEAPVW---TEDIAGLEKVSKN---------TDVPIAVGEEWRTHWDMRARIER--- 280 (388)
T ss_dssp CSCSCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHTS---------CCSCEEECTTCCSHHHHHHHHTT---
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEECCCC---hhhHHHHHHHHhh---------CCCCEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHH
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEIL 240 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~ 240 (442)
..++.|. ++.++ .-+..+.+++++|+++|+. +.++....+-........++
T Consensus 281 ~~~d~v~-------------ik~~~-GGit~~~~i~~~A~~~g~~-~~~h~~~es~i~~aa~~hla 331 (388)
T 2nql_A 281 CRIAIVQ-------------PEMGH-KGITNFIRIGALAAEHGID-VIPHATVGAGIFLAASLQAS 331 (388)
T ss_dssp SCCSEEC-------------CCHHH-HCHHHHHHHHHHHHHHTCE-ECCCCCSSCSHHHHHHHHHH
T ss_pred CCCCEEE-------------ecCCC-CCHHHHHHHHHHHHHcCCe-EEeecCCCcHHHHHHHHHHH
No 397
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=76.95 E-value=19 Score=35.97 Aligned_cols=104 Identities=8% Similarity=0.049 Sum_probs=67.3
Q ss_pred CCCHHHHHHHHHHHHHHHHH-cCCCeEE--EccCCCCCCCHHHHHHHHHHHHHc---CCcEEeccCcccccCH---HHHH
Q 013498 196 RKTKQQVVEIARSMVKFARS-LGCDDVE--FSPEDAGRSDRKFLYEILGEVIKV---GATTLNIPDTVGITMP---TEFG 266 (442)
Q Consensus 196 ~~s~~e~l~~~~~~v~~ar~-~G~~~V~--f~~edasr~d~~~l~~~~~~~~~~---Gad~I~laDT~G~~~P---~~v~ 266 (442)
|.+.+++++.+.+.++.+++ .|+. +. +++ .|.-++...++++.+.+. |+-.|-|+=.-....| ..+.
T Consensus 120 gl~~~~vv~~v~~~~~~a~~~~gi~-~~lI~~~---~R~~~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~ 195 (367)
T 3iar_A 120 DLTPDEVVALVGQGLQEGERDFGVK-ARSILCC---MRHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHV 195 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCE-EEEEEEE---ETTCGGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCe-EEEEEEe---CCCCCHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHH
Confidence 68999999999998888755 4764 43 333 233233345566666554 3444544422223444 6788
Q ss_pred HHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHH-hCCCEE
Q 013498 267 KLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGAC-AGARQV 310 (442)
Q Consensus 267 ~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~-aGa~~v 310 (442)
+.++..++. ++++.+|+....+. .+...|+. .|+++|
T Consensus 196 ~~f~~A~~~-----gl~~~~HagE~~~~--~~i~~al~~lg~~RI 233 (367)
T 3iar_A 196 QAYQEAVKS-----GIHRTVHAGEVGSA--EVVKEAVDILKTERL 233 (367)
T ss_dssp HHHHHHHHH-----TCEEEEEESSSSCH--HHHHHHHHTSCCSEE
T ss_pred HHHHHHHHc-----CCeeEEecCCcCCh--HHHHHHHHccCCcee
Confidence 888877765 37799999877664 46678885 799886
No 398
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=76.89 E-value=14 Score=36.54 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|.+.|+ .||-.+| +++..+.+.+. .-+|.+.+=.-.+.++++..++.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i-~iE~P~~-----~~~~~~~l~~~---------~~iPI~~de~i~~~~~~~~~i~~--- 258 (379)
T 2rdx_A 197 NQGWRVDNAIRLARATRDLDY-ILEQPCR-----SYEECQQVRRV---------ADQPMKLDECVTGLHMAQRIVAD--- 258 (379)
T ss_dssp TTCSCHHHHHHHHHHTTTSCC-EEECCSS-----SHHHHHHHHTT---------CCSCEEECTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhCCe-EEeCCcC-----CHHHHHHHHhh---------CCCCEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+=..-. .-+..+.++++.|++.|+. +.++....+
T Consensus 259 ~~~d~v~ik~~~~-------------GGit~~~~i~~~A~~~g~~-~~~~~~~es 299 (379)
T 2rdx_A 259 RGAEICCLKISNL-------------GGLSKARRTRDFLIDNRMP-VVAEDSWGG 299 (379)
T ss_dssp TCCSEEEEETTTT-------------TSHHHHHHHHHHHHHTTCC-EEEECSBCS
T ss_pred CCCCEEEEecccc-------------CCHHHHHHHHHHHHHcCCe-EEEeeccCc
No 399
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=76.85 E-value=21 Score=33.06 Aligned_cols=115 Identities=7% Similarity=-0.054 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC-C--CCCCCH------
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-D--AGRSDR------ 233 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-d--asr~d~------ 233 (442)
.+++..++.++..|.+.|.+.....+ +.+.++.+.+++.|+..+.+... + ....++
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~---------------~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~ 102 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLA---------------GRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKEC 102 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCG---------------GGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchH---------------HHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHH
Confidence 46777888888899999988765211 22445666778899852234331 1 112243
Q ss_pred -HHHHHHHHHHHHcCCcEEeccCcccc------cCHHHHHHHHHHHHHhCC--CCcceeEEEeecCCc
Q 013498 234 -KFLYEILGEVIKVGATTLNIPDTVGI------TMPTEFGKLIADIKANTP--GIENVVISTHCQNDL 292 (442)
Q Consensus 234 -~~l~~~~~~~~~~Gad~I~laDT~G~------~~P~~v~~li~~l~~~~p--~~~~v~i~~H~HNDl 292 (442)
+.+.+.++.+.+.|++.|.+.-..|. ..+.....+++.+++..+ ...++.|.+|.||.+
T Consensus 103 ~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~ 170 (287)
T 3kws_A 103 MDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRK 170 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 57778888899999998887432222 233444444444332110 001378999999853
No 400
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=76.80 E-value=48 Score=30.86 Aligned_cols=68 Identities=12% Similarity=0.029 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHH-cCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 232 DRKFLYEILGEVIK-VGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 232 d~~~l~~~~~~~~~-~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+++.+..+++...+ .|-..||+ |+.|.. ...++|+.+++..++. .+.+++--++ ...+-..++ ||+.|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl-~~~G~~---~~~~~i~~i~~~~~~~-Pv~vGgGI~s-----~e~a~~~~~-gAd~V 215 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYI-EYSGTY---GNPELVAEVKKVLDKA-RLFYGGGIDS-----REKAREMLR-YADTI 215 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEE-ECTTSC---CCHHHHHHHHHHCSSS-EEEEESCCCS-----HHHHHHHHH-HSSEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEE-eCCCCc---chHHHHHHHHHhCCCC-CEEEEecCCC-----HHHHHHHHh-CCCEE
Confidence 56666666655542 24456665 446652 2567888888876332 2566644444 122233344 88876
No 401
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=76.70 E-value=18 Score=34.56 Aligned_cols=122 Identities=14% Similarity=0.192 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhC---CCHHHHHH
Q 013498 129 DFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLR---KTKQQVVE 204 (442)
Q Consensus 129 d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~---~s~~e~l~ 204 (442)
.++.++++++. + .|++.--+. .+.+++..|.+.+...|-+.+++.-..+.. .+. .+ +
T Consensus 107 n~~ll~~~a~~-~---------~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~----~y~~~~~d----l- 167 (267)
T 2nwr_A 107 QTDLLLAAAKT-G---------RAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTF----GYNNLVVD----F- 167 (267)
T ss_dssp CHHHHHHHHTT-T---------SEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEEC----SSSCEECC----T-
T ss_pred CHHHHHHHHcC-C---------CcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCccccC----H-
Confidence 34577776532 1 244443333 467899999988888888777766443311 111 11 1
Q ss_pred HHHHHHHHHHHcCCCeEEEccCCC----------CCCCHHHHHHHHHHHHHcCCcEEe----------ccCcccccCHHH
Q 013498 205 IARSMVKFARSLGCDDVEFSPEDA----------GRSDRKFLYEILGEVIKVGATTLN----------IPDTVGITMPTE 264 (442)
Q Consensus 205 ~~~~~v~~ar~~G~~~V~f~~eda----------sr~d~~~l~~~~~~~~~~Gad~I~----------laDT~G~~~P~~ 264 (442)
..+...|+.| . |.|.+.-+ +.-..+++..++.++...|++.+. ++|-.=.+.|++
T Consensus 168 ---~~i~~lk~~~-p-VivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~~pd~al~Dg~qsl~p~~ 242 (267)
T 2nwr_A 168 ---RSLPIMKQWA-K-VIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPLSQ 242 (267)
T ss_dssp ---THHHHHTTTS-E-EEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEESCGGGCSSCTTTCEEGGG
T ss_pred ---HHHHHHHHcC-C-EEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecCCcccCCCccccCCCHHH
Confidence 1233445666 4 77754222 233457788899999999997432 358888999999
Q ss_pred HHHHHHHHHH
Q 013498 265 FGKLIADIKA 274 (442)
Q Consensus 265 v~~li~~l~~ 274 (442)
+.++++.+++
T Consensus 243 l~~l~~~i~~ 252 (267)
T 2nwr_A 243 LEGIIEAILE 252 (267)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 402
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=76.61 E-value=17 Score=35.93 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEccCCCCC--------------------------CCH-------HHHHHHHHHHHH
Q 013498 199 KQQVVEIARSMVKFARSLGCDDVEFSPEDAGR--------------------------SDR-------KFLYEILGEVIK 245 (442)
Q Consensus 199 ~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr--------------------------~d~-------~~l~~~~~~~~~ 245 (442)
.++.++..+++++.+++.|.. +.+.+..++| .+. +.+.+.++.+.+
T Consensus 76 ~d~~i~~~~~~~~~vh~~G~~-i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~ 154 (343)
T 3kru_A 76 NDEQVKELKKIVDICKANGAV-MGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANL 154 (343)
T ss_dssp SHHHHHHHHHHHHHHHHTTCE-EEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCce-EeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccc
Confidence 356677788888999999874 4433221111 112 344455566778
Q ss_pred cCCcEEecc-------------------CcccccC---HHHHHHHHHHHHHhCCCCcceeEEEeecC-C---cchHHHH-
Q 013498 246 VGATTLNIP-------------------DTVGITM---PTEFGKLIADIKANTPGIENVVISTHCQN-D---LGLSTAN- 298 (442)
Q Consensus 246 ~Gad~I~la-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~~v~i~~H~HN-D---lGLA~AN- 298 (442)
+|.|.|-|- |-.|... +.-+.++|+.+++.++. +.+|++-..- | -|.-...
T Consensus 155 aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~--d~pv~vRls~~~~~~~g~~~~~~ 232 (343)
T 3kru_A 155 AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPE--NKPIFVRVSADDYMEGGINIDMM 232 (343)
T ss_dssp HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCT--TSCEEEEEECCCSSTTSCCHHHH
T ss_pred cCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCc--cCCeEEEeechhhhccCccHHHH
Confidence 899987764 5556433 33457889999999864 3455554332 1 1322222
Q ss_pred ---HHHHHHhCCCEEEecccc
Q 013498 299 ---TIAGACAGARQVEVTING 316 (442)
Q Consensus 299 ---alaAl~aGa~~vd~Tv~G 316 (442)
+-..-++ +++|+++.++
T Consensus 233 ~~~a~~l~~~-vd~i~vs~g~ 252 (343)
T 3kru_A 233 VEYINMIKDK-VDLIDVSSGG 252 (343)
T ss_dssp HHHHHHHTTT-CSEEEEECCC
T ss_pred HHHHHHhhcc-ccEEeccCCc
Confidence 2223345 9999998554
No 403
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=76.52 E-value=7.3 Score=37.75 Aligned_cols=114 Identities=16% Similarity=0.205 Sum_probs=69.3
Q ss_pred ceEeeecc-cchhhHHHHHHHHHhCCC------CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc
Q 013498 152 PVICGLSR-CNERDIKTAWEAVKYAKR------PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS 224 (442)
Q Consensus 152 ~~i~~~~r-~~~~dI~~a~e~l~~~g~------~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~ 224 (442)
|++.--+. ++.+|++.+++.+...|. +.|.+.-..+. ++. ++..-++ ..+...|+.|+. |.|.
T Consensus 133 PVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~------y~~--~~~~vdl-~~i~~lk~~~~p-V~~D 202 (288)
T 3tml_A 133 PVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVS------FGY--NNLVSDM-RSLAIMRETNAP-VVFD 202 (288)
T ss_dssp CEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEE------CSS--SCEECCH-HHHHHGGGGSSC-EEEE
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCC------CCC--CcCcCCH-HHHHHHHhcCCc-EEEc
Confidence 55544444 478899999988776665 55555433331 111 0100001 223334556776 7763
Q ss_pred cCCC----------CCCCHHHHHHHHHHHHHcCCcEE----------eccCcccccCHHHHHHHHHHHHHh
Q 013498 225 PEDA----------GRSDRKFLYEILGEVIKVGATTL----------NIPDTVGITMPTEFGKLIADIKAN 275 (442)
Q Consensus 225 ~eda----------sr~d~~~l~~~~~~~~~~Gad~I----------~laDT~G~~~P~~v~~li~~l~~~ 275 (442)
+.-+ +--..+++..++.+++.+||+.+ .++|-.=.+.|+++.++++.+++.
T Consensus 203 ~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~pd~al~D~~~sl~p~el~~lv~~ir~i 273 (288)
T 3tml_A 203 ATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPNPAEAKSDGPNAVPLNRMGALLETLVTL 273 (288)
T ss_dssp HHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEESSGGGCSSCGGGCEEGGGHHHHHHHHHHH
T ss_pred CCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccChhhcCCchhhcCCHHHHHHHHHHHHHH
Confidence 2111 12235788899999999999833 247888899999999999998863
No 404
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=76.44 E-value=15 Score=33.82 Aligned_cols=161 Identities=15% Similarity=0.118 Sum_probs=83.1
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCC----CChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPA----ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~----~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.+-+++++.+.+.|++.|++--+. .....++.++.+. ... .|.+.+=.-.+.++++.+++ .|
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~---------ipvi~~Ggi~~~~~~~~~~~----~G 95 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFA---------EHIQIGGGIRSLDYAEKLRK----LG 95 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGG---------GGEEEESSCCSHHHHHHHHH----TT
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH-hcC---------CcEEEECCCCCHHHHHHHHH----CC
Confidence 356789999999999999883211 1223456666665 321 24343222234567776665 48
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC------------CCCCCCHHHHHHHHHHHH
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE------------DAGRSDRKFLYEILGEVI 244 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e------------dasr~d~~~l~~~~~~~~ 244 (442)
++.|.+- ... +++- +.++.++..| ..+.++.. ..+..+ ..++++.+.
T Consensus 96 ad~V~lg--~~~--------------l~~p-~~~~~~~~~g-~~i~~~~d~~~~~v~~~g~~~~~~~~---~~e~~~~~~ 154 (241)
T 1qo2_A 96 YRRQIVS--SKV--------------LEDP-SFLKSLREID-VEPVFSLDTRGGRVAFKGWLAEEEID---PVSLLKRLK 154 (241)
T ss_dssp CCEEEEC--HHH--------------HHCT-THHHHHHTTT-CEEEEEEEEETTEECCTTCSSCSCCC---HHHHHHHHH
T ss_pred CCEEEEC--chH--------------hhCh-HHHHHHHHcC-CcEEEEEEecCCEEEECCceecCCCC---HHHHHHHHH
Confidence 8887652 111 0100 1122224455 33333221 011123 345667777
Q ss_pred HcCCcEEeccCcc--cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH-HHHHHHHHh
Q 013498 245 KVGATTLNIPDTV--GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST-ANTIAGACA 305 (442)
Q Consensus 245 ~~Gad~I~laDT~--G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~-ANalaAl~a 305 (442)
++|++.|++-++. |..... -.++++.+++.++ +|+-.= -|... .+.....+.
T Consensus 155 ~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~~----iPvia~----GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 155 EYGLEEIVHTEIEKDGTLQEH-DFSLTKKIAIEAE----VKVLAA----GGISSENSLKTAQKV 209 (241)
T ss_dssp TTTCCEEEEEETTHHHHTCCC-CHHHHHHHHHHHT----CEEEEE----SSCCSHHHHHHHHHH
T ss_pred hCCCCEEEEEeecccccCCcC-CHHHHHHHHHhcC----CcEEEE----CCCCCHHHHHHHHhc
Confidence 8999999997742 332211 1456666666542 344322 34443 566666666
No 405
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=76.36 E-value=40 Score=33.09 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=22.1
Q ss_pred HHHHHHhHcCCCEEEEccC---CCChhHHH-----HHHHHHHHh
Q 013498 105 DIARQLAKLGVDIIEAGFP---AASKEDFE-----AVRTIAKEV 140 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~p---~~~~~d~e-----~v~~l~~~~ 140 (442)
++++...++|++.|.+.-+ ..+|++++ .++++.+.+
T Consensus 201 ~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i 244 (367)
T 1r3s_A 201 PYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQV 244 (367)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHH
Confidence 4455566799999988533 34676643 455555544
No 406
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=76.30 E-value=81 Score=33.19 Aligned_cols=156 Identities=19% Similarity=0.235 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+|.+++..| +...+.|+|.|-+-|. .+++|...++.+.+..+.. ...|+-.. +.+.++..-+.+.. .
T Consensus 240 lTekD~~dl-~f~~~~~vD~ia~SfV-r~a~Dv~~~r~~L~~~g~~-------i~IIAKIE--~~eav~nldeIl~~--s 306 (550)
T 3gr4_A 240 VSEKDIQDL-KFGVEQDVDMVFASFI-RKASDVHEVRKVLGEKGKN-------IKIISKIE--NHEGVRRFDEILEA--S 306 (550)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTC-CSHHHHHHHHHHHTTTTTT-------SEEEEEEC--SHHHHHTHHHHHHH--S
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecCC-CCHHHHHHHHHHHHhcCCC-------ceEEEEeC--CHHHHHHHHHHHHh--C
Confidence 667777776 4667889999999776 5677877777765443211 11222222 34444433222222 3
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc------cCCCCCCCHHHHHHHHHHHHHcCCcEE
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS------PEDAGRSDRKFLYEILGEVIKVGATTL 251 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~------~edasr~d~~~l~~~~~~~~~~Gad~I 251 (442)
+. ++++-.|+=.+ +..+++...-+.+++.|+..|.. |.+. +....|-+..++-+++.++.+ |+|.|
T Consensus 307 Dg--ImVaRGDLgve----i~~e~vp~~Qk~iI~~c~~agkp-Vi~ATQMLeSMi~~p~PTRAEvsDVanAvld-G~Dav 378 (550)
T 3gr4_A 307 DG--IMVARGDLGIE----IPAEKVFLAQKMMIGRCNRAGKP-VICATQMLESMIKKPRPTRAEGSDVANAVLD-GADCI 378 (550)
T ss_dssp SE--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSTTGGGGTCSSCCHHHHHHHHHHHHH-TCSEE
T ss_pred CE--EEEccchhccc----CCHHHHHHHHHHHHHHHHHhCCC-EEEEehhhHHhhcCCCccHHHHHHHHHHHHc-CCcEE
Confidence 43 45555554332 23456666678899999999986 5542 234556777888888877765 99999
Q ss_pred ecc-CcccccCHHHHHHHHHHHHH
Q 013498 252 NIP-DTVGITMPTEFGKLIADIKA 274 (442)
Q Consensus 252 ~la-DT~G~~~P~~v~~li~~l~~ 274 (442)
-|. .|.---.|-+.-+.+..+.+
T Consensus 379 MLSgETA~G~yPveaV~~M~~I~~ 402 (550)
T 3gr4_A 379 MLSGETAKGDYPLEAVRMQHLIAR 402 (550)
T ss_dssp EESHHHHTCSCHHHHHHHHHHHHH
T ss_pred EEecCccCCCCHHHHHHHHHHHHH
Confidence 995 57777888887766666653
No 407
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=76.26 E-value=7.3 Score=40.52 Aligned_cols=69 Identities=22% Similarity=0.183 Sum_probs=49.4
Q ss_pred HHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
.+.++.+.++|+|.|.|-=+.| .+..+.+.++.+++.+|+ ++|.+- ......-+..++++||+.|.+..
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~---~~Vi~g----~v~t~e~a~~l~~aGaD~I~Vg~ 301 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPH---LEIIGG----NVATAEGARALIEAGVSAVKVGI 301 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTT---CCEEEE----EECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCC---ceEEEc----ccCcHHHHHHHHHhCCCEEEECC
Confidence 4667788889999887743333 456788999999999975 455541 12234567888999999998654
No 408
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=76.20 E-value=42 Score=29.87 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHHHHhHc---CCCEEEE--ccCCCChhH-HHHHHHHHHHhcccccccCCccceEeeeccc--chhhHHHH
Q 013498 97 TLTSKEKLDIARQLAKL---GVDIIEA--GFPAASKED-FEAVRTIAKEVGNAVDAESGYVPVICGLSRC--NERDIKTA 168 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~---GV~~IEv--G~p~~~~~d-~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~--~~~dI~~a 168 (442)
.++.++.++.++.+.+. ++..|-+ |-|...++. .+.++.+.+. ++...+..-+.. ..+.++.
T Consensus 49 ~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~~~l~~l~~~~~~~---------~~~i~i~Tng~~~~~~~~~~~- 118 (245)
T 3c8f_A 49 EVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKE---------GIHTCLDTNGFVRRYDPVIDE- 118 (245)
T ss_dssp EECHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGHHHHHHHHHHHHTT---------TCCEEEEECCCCCCCCHHHHH-
T ss_pred cCCHHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCHHHHHHHHHHHHHc---------CCcEEEEeCCCcCcCHHHHHH-
Confidence 45677777777666554 4666655 445544432 2445544332 121122221211 3344433
Q ss_pred HHHHHhCCCCEEEEeecCC-h-HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC-CCCC-CCHHHHHHHHHHHH
Q 013498 169 WEAVKYAKRPRIHTFIATS-G-IHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE-DAGR-SDRKFLYEILGEVI 244 (442)
Q Consensus 169 ~e~l~~~g~~~v~i~~~~S-d-~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e-dasr-~d~~~l~~~~~~~~ 244 (442)
+... ++.|.+.+-.. + .|... -+.+. +++.+.++.+++.|+. |.+... ..+. .+.+.+.++++.+.
T Consensus 119 ---l~~~-~~~v~isld~~~~~~~~~~-~~~~~----~~~~~~i~~l~~~g~~-v~i~~~~~~g~~~~~~~~~~~~~~~~ 188 (245)
T 3c8f_A 119 ---LLEV-TDLVMLDLKQMNDEIHQNL-VGVSN----HRTLEFAKYLANKNVK-VWIRYVVVPGWSDDDDSAHRLGEFTR 188 (245)
T ss_dssp ---HHHT-CSEEEEECCCSSHHHHHHH-HSSCS----HHHHHHHHHHHHHTCC-EEEEEEECTTTTCCHHHHHHHHHHHH
T ss_pred ---HHHh-CCEEEEeCCCCCHHHhhhc-cCCCH----HHHHHHHHHHHhcCCE-EEEEEeecCCCCCCHHHHHHHHHHHH
Confidence 2233 67777765553 3 33322 24442 5566777888888875 544321 1122 34688888898888
Q ss_pred HcCC-cEEec
Q 013498 245 KVGA-TTLNI 253 (442)
Q Consensus 245 ~~Ga-d~I~l 253 (442)
+.|+ +.+.+
T Consensus 189 ~~~~~~~~~~ 198 (245)
T 3c8f_A 189 DMGNVEKIEL 198 (245)
T ss_dssp HHCCEEEEEE
T ss_pred hcCCCceeEE
Confidence 8885 55544
No 409
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=76.20 E-value=9.2 Score=36.09 Aligned_cols=211 Identities=11% Similarity=0.048 Sum_probs=105.7
Q ss_pred CCceEEEeCCCCcCCCCCCCCCCHHHHHHHHHHHhHcCCCEEEEccCCC-----ChhHHHHHHHHHHHhcccccccCCcc
Q 013498 77 PNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAA-----SKEDFEAVRTIAKEVGNAVDAESGYV 151 (442)
Q Consensus 77 ~~~V~I~DtTLRDG~Q~~g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~-----~~~d~e~v~~l~~~~~~~~~~~~~l~ 151 (442)
+.++-|.-.++++ ..+.++. ++.+.++|++.||+..+.. .+.+.+.++.+.+..+-.+
T Consensus 22 ~~klgi~~~~~~~-------~~~~~~~---l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i------- 84 (296)
T 2g0w_A 22 KCPITISSYTLGT-------EVSFPKR---VKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKV------- 84 (296)
T ss_dssp CCCEEECGGGGTT-------TSCHHHH---HHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEE-------
T ss_pred CCCceeechhcCC-------CCCHHHH---HHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCce-------
Confidence 3457777777765 1455554 5556778999999965311 1223455555555432211
Q ss_pred ceEeeecc---cc------hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEE
Q 013498 152 PVICGLSR---CN------ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVE 222 (442)
Q Consensus 152 ~~i~~~~r---~~------~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~ 222 (442)
..+..+.. .. .+.++.+++.....|.+.|.+. +.. ..+.+...+.+.+++++| .|+. +.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~g-~~~--------~~~~~~~~~~l~~l~~~a--~Gv~-l~ 152 (296)
T 2g0w_A 85 TEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCG-LLE--------KIPEEQIIVALGELCDRA--EELI-IG 152 (296)
T ss_dssp EEEECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEEC-CCS--------CCCHHHHHHHHHHHHHHH--TTSE-EE
T ss_pred EeehhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEEc-CCC--------CCCHHHHHHHHHHHHHHh--cCCE-EE
Confidence 11111111 11 1234455655555688887652 211 124677788888888888 7763 54
Q ss_pred EccC-CCCCCCHHHHHHHHHHHHHcCCcEEec-cCccc----ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHH
Q 013498 223 FSPE-DAGRSDRKFLYEILGEVIKVGATTLNI-PDTVG----ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLST 296 (442)
Q Consensus 223 f~~e-dasr~d~~~l~~~~~~~~~~Gad~I~l-aDT~G----~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ 296 (442)
+-.. ...-.+++.+.++++.+ +-+.+.+ -||.= -..|.+ .+ +.+. +-...+|.+|..+...
T Consensus 153 lE~~~~~~~~~~~~~~~l~~~v---~~~~vgl~~D~~H~~~~g~d~~~------~~-~~~~---~~i~~vHl~D~~~~~~ 219 (296)
T 2g0w_A 153 LEFMPYSGVADLQAAWRVAEAC---GRDNAQLICDTWHWARANQTAES------IK-NVPA---DRIVSIQLCDVHETPY 219 (296)
T ss_dssp EECCTTSSSCSHHHHHHHHHHH---TCTTEEEEEEHHHHHHTTCCGGG------GT-TCCG---GGEEEEEECBCCSSCC
T ss_pred EEecCCCCCCCHHHHHHHHHHh---CCCCeEEEEehhHhhccCCCHHH------HH-hcCh---hhEEEEEecCCCCCCc
Confidence 4321 11224566666666554 3332222 25521 112221 11 1122 2456788888653210
Q ss_pred HHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhccc
Q 013498 297 ANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRGE 338 (442)
Q Consensus 297 ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g~ 338 (442)
.- +.. ..+.++ .. .| .|..+.+.++..|+..|.
T Consensus 220 ~~-~~~-~~~~~r---~~--pG--~G~id~~~i~~~L~~~gy 252 (296)
T 2g0w_A 220 KE-LRE-ESLHDR---LA--PG--EGYGDTVGFAKILKEHGV 252 (296)
T ss_dssp SS-HHH-HHHHBC---BC--TT--SSSSCHHHHHHHHHHHTC
T ss_pred hh-hhh-HHHhcC---CC--CC--CCCccHHHHHHHHHHcCC
Confidence 00 000 000011 12 34 388999999999998764
No 410
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=76.16 E-value=14 Score=35.75 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=60.9
Q ss_pred HHhCCCCEEEEeecCChHHHHHHh------CCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCC-CCHHHHHHHHHHHH
Q 013498 172 VKYAKRPRIHTFIATSGIHMEHKL------RKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR-SDRKFLYEILGEVI 244 (442)
Q Consensus 172 l~~~g~~~v~i~~~~Sd~h~~~~l------~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr-~d~~~l~~~~~~~~ 244 (442)
+..+|++.|- +..|-. + ..+ ..|.++.+..++...+-+ ....|...+++.+. .+++...+-+.++.
T Consensus 50 ~e~aG~d~il--vGdSl~-~-~~lG~~dt~~vTldemi~h~~aV~r~~---~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 122 (281)
T 1oy0_A 50 FDEAGIPVLL--VGDSAA-N-VVYGYDTTVPISIDELIPLVRGVVRGA---PHALVVADLPFGSYEAGPTAALAAATRFL 122 (281)
T ss_dssp HHTTTCCEEE--ECTTHH-H-HTTCCSSSSSCCGGGTHHHHHHHHHHC---TTSEEEEECCTTSSTTCHHHHHHHHHHHH
T ss_pred HHHcCCCEEE--ECHHHH-H-HHcCCCCCCCCCHHHHHHHHHHHHhcC---CCCeEEEECCCCcccCCHHHHHHHHHHHH
Confidence 3457898773 333321 1 223 346777777666554433 22235577777665 47888777555555
Q ss_pred -HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 013498 245 -KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 288 (442)
Q Consensus 245 -~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~ 288 (442)
++|++.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 123 ~eaGa~aVklEdg------~e~~~~I~al~~a-----gIpV~gHi 156 (281)
T 1oy0_A 123 KDGGAHAVKLEGG------ERVAEQIACLTAA-----GIPVMAHI 156 (281)
T ss_dssp HTTCCSEEEEEBS------GGGHHHHHHHHHH-----TCCEEEEE
T ss_pred HHhCCeEEEECCc------HHHHHHHHHHHHC-----CCCEEeee
Confidence 499999999997 3677788888775 24555553
No 411
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=76.02 E-value=13 Score=36.96 Aligned_cols=81 Identities=10% Similarity=0.097 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCcEEecc-------------------CcccccCH---HHHHHHHHHHHHhCCCCcceeEEEeec---
Q 013498 235 FLYEILGEVIKVGATTLNIP-------------------DTVGITMP---TEFGKLIADIKANTPGIENVVISTHCQ--- 289 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~la-------------------DT~G~~~P---~~v~~li~~l~~~~p~~~~v~i~~H~H--- 289 (442)
.+.+.++.+.++|.|.|-|- |-.|...- .-..++|+.+++.++. +.+|++-..
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~--d~pV~vRis~~~ 236 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPE--NLPLTARFGVLE 236 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCT--TSCEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCC--CceEEEEecchh
Confidence 33445556777899987663 44443322 2356888999998864 234444222
Q ss_pred -CCcc-hHHHH----HHHHHHhCCCEEEeccccc
Q 013498 290 -NDLG-LSTAN----TIAGACAGARQVEVTINGI 317 (442)
Q Consensus 290 -NDlG-LA~AN----alaAl~aGa~~vd~Tv~Gl 317 (442)
.+-| .-... +-..-++|+++|+++..+.
T Consensus 237 ~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 270 (363)
T 3l5l_A 237 YDGRDEQTLEESIELARRFKAGGLDLLSVSVGFT 270 (363)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 2224 33333 3344567999999987543
No 412
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=75.98 E-value=7.3 Score=40.44 Aligned_cols=67 Identities=18% Similarity=0.108 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 237 YEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
.+.++.+.++|+|.|.|-=+. ..+..+.+.++.+++.+|+ ++|..- ......-+..+.++||+.|.+
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~--g~~~~~~~~v~~i~~~~p~---~~Vi~g----~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAH--GHSKGVIERVRWVKQTFPD---VQVIGG----NIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSC--CSBHHHHHHHHHHHHHCTT---SEEEEE----EECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccC--CcchhHHHHHHHHHHHCCC---ceEEEe----eeCcHHHHHHHHHcCCCEEEE
Confidence 466778889999998884333 3467888999999999975 455441 113345678899999999987
No 413
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=75.92 E-value=18 Score=35.70 Aligned_cols=131 Identities=12% Similarity=0.070 Sum_probs=79.4
Q ss_pred HHhCCCCEEEEeec--------CChH--HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC---eEEEccCCC--CCCCHHH
Q 013498 172 VKYAKRPRIHTFIA--------TSGI--HMEHKLRKTKQQVVEIARSMVKFARSL-GCD---DVEFSPEDA--GRSDRKF 235 (442)
Q Consensus 172 l~~~g~~~v~i~~~--------~Sd~--h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~---~V~f~~eda--sr~d~~~ 235 (442)
.+++|.|.|.+..+ .|+. +....+|-+.+.-.+.+.+.++.+|+. |.+ .|.+++.+. ...+.+.
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 45679999888633 1221 223345667777777888888888876 322 356666431 2356788
Q ss_pred HHHHHHHHHHcCCcEEeccC--cccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhC-CCE
Q 013498 236 LYEILGEVIKVGATTLNIPD--TVGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAG-ARQ 309 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laD--T~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aG-a~~ 309 (442)
..++++.+.++ +|.|.+.. +... ..|....++++.+++.++ ++|..=.-- .....+..+++.| ||.
T Consensus 232 ~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~----iPVi~~Ggi---~t~e~Ae~~l~~G~aD~ 303 (343)
T 3kru_A 232 MVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN----IKTSAVGLI---TTQELAEEILSNERADL 303 (343)
T ss_dssp HHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT----CEEEEESSC---CCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC----cccceeeee---eHHHHHHHHHhchhhHH
Confidence 89999999999 99988841 1110 123234567778887763 444432211 0134566777887 776
Q ss_pred E
Q 013498 310 V 310 (442)
Q Consensus 310 v 310 (442)
|
T Consensus 304 V 304 (343)
T 3kru_A 304 V 304 (343)
T ss_dssp E
T ss_pred H
Confidence 5
No 414
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=75.91 E-value=8.1 Score=38.24 Aligned_cols=70 Identities=16% Similarity=0.229 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
.++.+.+.++...+.|++.|.+.-+-| ...|+++.++++..++. ++++.+|++.+. ...
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~-----~i~ 242 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR-----GTYVLAHAYTPA-----AIA 242 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT-----TCCEEEEECSHH-----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc-----CCEEEEEeCChH-----HHH
Confidence 456666777777777887766554322 57889999999888875 367899998543 356
Q ss_pred HHHHhCCCEEE
Q 013498 301 AGACAGARQVE 311 (442)
Q Consensus 301 aAl~aGa~~vd 311 (442)
.++++|++.|.
T Consensus 243 ~al~~G~~~i~ 253 (426)
T 2r8c_A 243 RAVRCGVRTIE 253 (426)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCCEEe
Confidence 77889998764
No 415
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=75.83 E-value=30 Score=35.72 Aligned_cols=132 Identities=18% Similarity=0.105 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhHcCCCEEEEccCC-CChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCE
Q 013498 101 KEKLDIARQLAKLGVDIIEAGFPA-ASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPR 179 (442)
Q Consensus 101 e~kl~ia~~L~~~GV~~IEvG~p~-~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~ 179 (442)
++-.+.++.|.++|+|.|++..-. .++.-.+.++.+.+..+. .+.+.+.. ...++.+.+.+ +|++.
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~--------~~Vi~g~v-~t~e~a~~l~~----aGaD~ 294 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPD--------VQVIGGNI-ATAEAAKALAE----AGADA 294 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTT--------SEEEEEEE-CSHHHHHHHHH----TTCSE
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCC--------ceEEEeee-CcHHHHHHHHH----cCCCE
Confidence 345677889999999999996432 234446788888775421 23444432 34555554444 59998
Q ss_pred EEEee-cCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEecc
Q 013498 180 IHTFI-ATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIP 254 (442)
Q Consensus 180 v~i~~-~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~la 254 (442)
|.+-. +.|..--+...+.... .+..+.++++.+++.+++ |.- +.+=.+++.+.+.+ .+||+.+.+.
T Consensus 295 I~vg~g~Gs~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iP-VIa---~GGI~~~~di~kal----~~GAd~V~vG 361 (490)
T 4avf_A 295 VKVGIGPGSICTTRIVAGVGVP-QISAIANVAAALEGTGVP-LIA---DGGIRFSGDLAKAM----VAGAYCVMMG 361 (490)
T ss_dssp EEECSSCSTTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCC-EEE---ESCCCSHHHHHHHH----HHTCSEEEEC
T ss_pred EEECCCCCcCCCccccCCCCcc-HHHHHHHHHHHhccCCCc-EEE---eCCCCCHHHHHHHH----HcCCCeeeec
Confidence 87621 1111111112232211 245556666767677775 433 23444556554433 5699888775
No 416
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=75.76 E-value=53 Score=32.38 Aligned_cols=141 Identities=9% Similarity=0.019 Sum_probs=73.9
Q ss_pred cchhhHHHHHHHHHhCCCC-EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCCCCCCCHHHH
Q 013498 160 CNERDIKTAWEAVKYAKRP-RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRKFL 236 (442)
Q Consensus 160 ~~~~dI~~a~e~l~~~g~~-~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~edasr~d~~~l 236 (442)
...+|...+.+.+..++.+ .|.+-+++....-...++.++ +.+.++++.+|+. ... .|-+.+ + .+.+.+
T Consensus 138 ~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~----e~l~~il~av~~~~~~PV~vKi~p-~---~~~~~~ 209 (345)
T 3oix_A 138 MSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDF----ETTDQILSEVFTYFTKPLGIKLPP-Y---FDIVHF 209 (345)
T ss_dssp SSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCH----HHHHHHHHHHTTTCCSCEEEEECC-C---CCHHHH
T ss_pred CCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCH----HHHHHHHHHHHHHhCCCeEEEECC-C---CCHHHH
Confidence 4677777777777666776 676655542211001122233 3344555555554 233 244454 3 466666
Q ss_pred HHHHHHHHHcCCcEEeccCc-------------------ccc----cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcc
Q 013498 237 YEILGEVIKVGATTLNIPDT-------------------VGI----TMPTEFGKLIADIKANTPGIENVVISTHCQNDLG 293 (442)
Q Consensus 237 ~~~~~~~~~~Gad~I~laDT-------------------~G~----~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlG 293 (442)
.++++.+...|++.|.-..| .|. .......++|..+++.+++ +++|..=.==..
T Consensus 210 a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~--~ipIIg~GGI~s- 286 (345)
T 3oix_A 210 DQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNP--SIQIIGTGGVXT- 286 (345)
T ss_dssp HHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCT--TSEEEEESSCCS-
T ss_pred HHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCC--CCcEEEECCCCC-
Confidence 66665555445554332211 121 2223346788999998863 356554332222
Q ss_pred hHHHHHHHHHHhCCCEEEec
Q 013498 294 LSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 294 LA~ANalaAl~aGa~~vd~T 313 (442)
..-+++++.+||+.|...
T Consensus 287 --~~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 287 --GRDAFEHILCGASMVQIG 304 (345)
T ss_dssp --HHHHHHHHHHTCSEEEES
T ss_pred --hHHHHHHHHhCCCEEEEC
Confidence 245677788899988653
No 417
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=75.68 E-value=8 Score=39.20 Aligned_cols=101 Identities=10% Similarity=-0.011 Sum_probs=65.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++-+++++.|++.|++.||--.| +++++.++++++... +|.+.+=.-.+..+++..++. .
T Consensus 239 ~~~~~~~Ai~~~~~Le~~~i~~iEeP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~li~~---~ 303 (412)
T 3stp_A 239 MGWNLDYAKRMLPKLAPYEPRWLEEPVI---ADDVAGYAELNAMNI---------VPISGGEHEFSVIGCAELINR---K 303 (412)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHTCS---------SCEEECTTCCSHHHHHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhCCC---------CCEEeCCCCCCHHHHHHHHHc---C
Confidence 3578999999999999999999997443 557778888777521 243332222345666666553 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+= .++-.-+..+++++..|+..|+. +..++
T Consensus 304 a~D~v~ik-------------~~~~GGit~a~kia~~A~a~gi~-v~~h~ 339 (412)
T 3stp_A 304 AVSVLQYD-------------TNRVGGITAAQKINAIAEAAQIP-VIPHA 339 (412)
T ss_dssp CCSEECCC-------------HHHHTHHHHHHHHHHHHHHHTCC-BCCSS
T ss_pred CCCEEecC-------------hhhcCCHHHHHHHHHHHHHcCCE-EEecc
Confidence 35554321 11122367788899999999986 55544
No 418
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=75.29 E-value=7.1 Score=39.05 Aligned_cols=97 Identities=9% Similarity=0.052 Sum_probs=62.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~~ 175 (442)
.++.++-+++++.|++.|++.||--+| +++++..+.+.+... +|.+ +=.+ .+.++++..++. .
T Consensus 217 ~~~~~~a~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------iPIa-~dE~~~~~~~~~~~i~~---~ 280 (393)
T 2og9_A 217 QWDRPTAQRMCRIFEPFNLVWIEEPLD---AYDHEGHAALALQFD---------TPIA-TGEMLTSAAEHGDLIRH---R 280 (393)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEECCSC---TTCHHHHHHHHHHCS---------SCEE-ECTTCCSHHHHHHHHHT---T
T ss_pred CCCHHHHHHHHHHHHhhCCCEEECCCC---cccHHHHHHHHHhCC---------CCEE-eCCCcCCHHHHHHHHHC---C
Confidence 478999999999999999999997443 457788888877532 2332 2222 245666666553 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f 223 (442)
.++.|.+ .. ++-.-+..+.++++.|++.|+. +..
T Consensus 281 ~~d~v~i--k~-----------~~~GGit~~~~i~~~A~~~gi~-~~~ 314 (393)
T 2og9_A 281 AADYLMP--DA-----------PRVGGITPFLKIASLAEHAGLM-LAP 314 (393)
T ss_dssp CCSEECC--CH-----------HHHTSHHHHHHHHHHHHHTTCE-ECC
T ss_pred CCCEEee--Cc-----------cccCCHHHHHHHHHHHHHcCCE-Eec
Confidence 3555432 11 1112266778899999999985 544
No 419
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=75.18 E-value=32 Score=38.84 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEec----cCc-----ccc---cCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHH
Q 013498 231 SDRKFLYEILGEVIKVGATTLNI----PDT-----VGI---TMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTAN 298 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~l----aDT-----~G~---~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~AN 298 (442)
.+++.+.+.++.+.++|+|.|.| +-+ .|. -.|..+.++++.+++.+. +||.+-.--|.--...-
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~----~Pv~vK~~~~~~~~~~~ 720 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ----IPFFAKLTPNVTDIVSI 720 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC----CceEEEeCCChHHHHHH
Confidence 46788889999999999998777 222 222 468889999999999873 55666554444445666
Q ss_pred HHHHHHhCCCEEEe
Q 013498 299 TIAGACAGARQVEV 312 (442)
Q Consensus 299 alaAl~aGa~~vd~ 312 (442)
+.++.++|++.|.+
T Consensus 721 a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 721 ARAAKEGGADGVTA 734 (1025)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 78889999999998
No 420
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=75.16 E-value=12 Score=36.69 Aligned_cols=103 Identities=11% Similarity=0.096 Sum_probs=71.1
Q ss_pred HHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE-ecc-CcccccCHHHHHHHHHHHHHhCCCCccee
Q 013498 206 ARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIP-DTVGITMPTEFGKLIADIKANTPGIENVV 283 (442)
Q Consensus 206 ~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I-~la-DT~G~~~P~~v~~li~~l~~~~p~~~~v~ 283 (442)
.+++.+.|++.|+..-.|++ .+.+.+..+++.+.+.+...| .+. .+..++-..-+..++..+.+... ++|
T Consensus 5 ~~~ll~~A~~~~yAV~AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~---~VP 76 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVGAFNF-----VNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYP---HIP 76 (307)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-----SSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHST---TSC
T ss_pred HHHHHHHHHHcCceEEEEee-----CCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcC---CCc
Confidence 45788899999986446776 457999999999999987654 343 22333444556677777766533 377
Q ss_pred EEEeecCCcchHHHHHHHHHHhCCCE--EEecccccc
Q 013498 284 ISTHCQNDLGLSTANTIAGACAGARQ--VEVTINGIG 318 (442)
Q Consensus 284 i~~H~HNDlGLA~ANalaAl~aGa~~--vd~Tv~GlG 318 (442)
|.+|. |-|--..-...|+++|.+- +|+|-..+-
T Consensus 77 ValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~e 111 (307)
T 3n9r_A 77 VALHL--DHGTTFESCEKAVKAGFTSVMIDASHHAFE 111 (307)
T ss_dssp EEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHH
T ss_pred EEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCCCHH
Confidence 88776 3344467888999999976 587765543
No 421
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=75.11 E-value=34 Score=31.02 Aligned_cols=166 Identities=14% Similarity=0.101 Sum_probs=80.6
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCC-eEEEccCCCCCCCHHHHHH
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCD-DVEFSPEDAGRSDRKFLYE 238 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~-~V~f~~edasr~d~~~l~~ 238 (442)
...++...++.+...|++.+++-+.-- +.-.++... . +.++.+++. +.. .+.+-.. |++ +
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~~dg--~f~~~~~~~----~----~~i~~l~~~~~~~~~v~l~vn-----d~~---~ 82 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDG--RFVPNITIG----P----LVVDSLRPITDLPLDVHLMIV-----EPD---Q 82 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBS--SSSSCBCCC----H----HHHHHHGGGCCSCEEEEEESS-----SHH---H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeccC--CcccccccC----H----HHHHHHHhccCCcEEEEEEec-----CHH---H
Confidence 345555566666667999887742100 000011111 1 233334444 333 1333222 243 4
Q ss_pred HHHHHHHcCCcEEeccCc--ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE--Eecc
Q 013498 239 ILGEVIKVGATTLNIPDT--VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV--EVTI 314 (442)
Q Consensus 239 ~~~~~~~~Gad~I~laDT--~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v--d~Tv 314 (442)
.++.+.++|+|.|.+-+. .+ -. ..+.++.+++. +. .+-+.++.|.+.- .+.++..|+++| ++..
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~~~-~~---~~~~~~~~~~~--g~-~ig~~~~p~t~~e-----~~~~~~~~~d~vl~~~~~ 150 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQSST-IH---LHRTINQIKSL--GA-KAGVVLNPGTPLT-----AIEYVLDAVDLVLIMSVN 150 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTTTC-SC---HHHHHHHHHHT--TS-EEEEEECTTCCGG-----GGTTTTTTCSEEEEESSC
T ss_pred HHHHHHHcCCCEEEEEecCccc-hh---HHHHHHHHHHc--CC-cEEEEeCCCCCHH-----HHHHHHhhCCEEEEEEEc
Confidence 566667899999998887 44 22 34566666654 21 2455555555433 244556789987 3333
Q ss_pred cccccccCcccHHHHHHHHHhcc----ccccCCccCCCChhHHHHH
Q 013498 315 NGIGERAGNASLEEVVMAFKCRG----EHILGGLYTGINTRHIVMA 356 (442)
Q Consensus 315 ~GlGeraGNa~lEevv~~L~~~g----~~~~~G~~tgidl~~L~~l 356 (442)
.|.++..=+....+.+..++..- .+....+.-||+.+.+.++
T Consensus 151 pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~ 196 (230)
T 1rpx_A 151 PGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKV 196 (230)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHH
Confidence 35443322222222233333211 0111134567887777554
No 422
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=75.07 E-value=30 Score=34.86 Aligned_cols=127 Identities=19% Similarity=0.192 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHH-cCCCeEEEccCCCCCCCHHHHHHHHHHHHHc-CCcEEeccCccc-ccCHHHH-HHHHHHHHHhCCCC
Q 013498 204 EIARSMVKFARS-LGCDDVEFSPEDAGRSDRKFLYEILGEVIKV-GATTLNIPDTVG-ITMPTEF-GKLIADIKANTPGI 279 (442)
Q Consensus 204 ~~~~~~v~~ar~-~G~~~V~f~~edasr~d~~~l~~~~~~~~~~-Gad~I~laDT~G-~~~P~~v-~~li~~l~~~~p~~ 279 (442)
+.+.+.++++++ .|+..|.|+.-+..-...+.+.++++.+.+. +...|.+ -|.| +..|..+ .++++.|++. .
T Consensus 148 eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i-~Tng~~~~p~~it~e~l~~L~~~-~-- 223 (416)
T 2a5h_A 148 ERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI-GSRTPVVLPQRITPELVNMLKKY-H-- 223 (416)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEE-ECSHHHHCGGGCCHHHHHHHGGG-C--
T ss_pred HHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEE-EecccccccccCCHHHHHHHHhc-C--
Confidence 334566777887 5776677754333334445688888888887 5678888 7888 5555222 4555666665 2
Q ss_pred cceeEEEeecCCcch---HHHHHHHHHHhCCCE-EEeccc-ccccccCcccHHHHHHHHHhcc
Q 013498 280 ENVVISTHCQNDLGL---STANTIAGACAGARQ-VEVTIN-GIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 280 ~~v~i~~H~HNDlGL---A~ANalaAl~aGa~~-vd~Tv~-GlGeraGNa~lEevv~~L~~~g 337 (442)
.+.|++|+-+...+ .+.+.-.+.++|... +.+++. |+... -..+++++..+...|
T Consensus 224 -~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~GvNd~--~e~l~~l~~~l~~lg 283 (416)
T 2a5h_A 224 -PVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRGVNDC--VHVMKELVNKLVKIR 283 (416)
T ss_dssp -SEEEEECCCSGGGCCHHHHHHHHHHHHTTCCEEEEEECCTTTTCS--HHHHHHHHHHHHHTT
T ss_pred -cEEEEEecCCHHHHhHHHHHHHHHHHHcCCEEEEEEEEECCCCCC--HHHHHHHHHHHHHcC
Confidence 37788887433332 333344445679875 444443 44421 123677777776655
No 423
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=74.98 E-value=92 Score=33.18 Aligned_cols=219 Identities=18% Similarity=0.219 Sum_probs=124.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.+|.+++..| +.-.+.|+|+|-+-|. .+++|...++.+.+..+.. ...|+-.. +.+.++..-+.+..
T Consensus 190 ~ltekD~~dl-~f~~~~~vD~Ia~SFV-r~a~Dv~~~r~~l~~~~~~-------i~IiaKIE--~~eav~nldeIl~~-- 256 (606)
T 3t05_A 190 GITEKDAEDI-RFGIKENVDFIAASFV-RRPSDVLEIREILEEQKAN-------ISVFPKIE--NQEGIDNIEEILEV-- 256 (606)
T ss_dssp SSCHHHHHHH-HHHHHTTCSEEEETTC-CSHHHHHHHHHHHHHTTCC-------CEEEECCC--SHHHHHTHHHHHHH--
T ss_pred CCChhHHHHH-HHHHHcCCCEEEECCC-CCHHHHHHHHHHHHhcCCC-------CeEEEEeC--CHHHHHhHHHHHHh--
Confidence 3678888777 4556899999999776 5688888888776654321 11122111 34444332222222
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE------ccCCCCCCCHHHHHHHHHHHHHcCCcE
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF------SPEDAGRSDRKFLYEILGEVIKVGATT 250 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f------~~edasr~d~~~l~~~~~~~~~~Gad~ 250 (442)
.|. ++++-.|+=.+ +..+++....+.+++.|+..|.. |.+ ++....|-+..++-+++.++.+ |+|.
T Consensus 257 sDG--ImVARGDLgve----i~~e~vp~~Qk~ii~~~~~~gkp-vi~ATQMLeSMi~~p~PTRAEvsDVanAv~d-GaDa 328 (606)
T 3t05_A 257 SDG--LMVARGDMGVE----IPPEKVPMVQKDLIRQCNKLGKP-VITATQMLDSMQRNPRATRAEASDVANAIYD-GTDA 328 (606)
T ss_dssp CSC--EEEEHHHHHHH----SCGGGHHHHHHHHHHHHHHHTCC-EEEESSSSGGGTTCSSCCHHHHHHHHHHHHH-TCSE
T ss_pred CCE--EEEccccccCc----CCHHHHHHHHHHHHHHHHHcCCC-eEEehHHHHHhhcCCCccHHHHHHHHHHHHc-CCCE
Confidence 343 34454454322 23456667778999999999986 655 2234556777888888877764 9999
Q ss_pred Eecc-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEe-----ecCCc--chHHHHHHHHHHhCCCEE-Eeccccccc--
Q 013498 251 LNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTH-----CQNDL--GLSTANTIAGACAGARQV-EVTINGIGE-- 319 (442)
Q Consensus 251 I~la-DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H-----~HNDl--GLA~ANalaAl~aGa~~v-d~Tv~GlGe-- 319 (442)
|-|. .|.---.|.+.-+.+..+.+..-......-.++ ...+. ..|.|...+|...+|..| -.|-.|---
T Consensus 329 vMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~ 408 (606)
T 3t05_A 329 VMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTART 408 (606)
T ss_dssp EEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHH
T ss_pred EEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHH
Confidence 9997 576667787766666655432110000000000 01122 234444556777788854 445554221
Q ss_pred ----ccC-----cccHHHHHHHHHhc
Q 013498 320 ----RAG-----NASLEEVVMAFKCR 336 (442)
Q Consensus 320 ----raG-----Na~lEevv~~L~~~ 336 (442)
|.. -++-+.++..|...
T Consensus 409 isr~RP~~pIia~t~~~~~~r~l~L~ 434 (606)
T 3t05_A 409 ISKYRPHSDIIAVTPSEETARQCSIV 434 (606)
T ss_dssp HHHTCCSSEEEEEESCHHHHHHHHTS
T ss_pred HHhhCCCCCEEEEcCCHHHHHhhhcc
Confidence 332 34556777666643
No 424
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=74.78 E-value=15 Score=38.16 Aligned_cols=70 Identities=14% Similarity=0.094 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecc
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTI 314 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv 314 (442)
..+.++.+.++|+|.|.|-=+.| .|....++++.+++.+|+ ++|....= ....-+..+.++||+.|+++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G--~~~~~~~~i~~i~~~~~~---~pvi~~~v----~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQG--NSVYQIAMVHYIKQKYPH---LQVIGGNV----VTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--CSHHHHHHHHHHHHHCTT---CEEEEEEE----CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHcCCCEEEeeccCC--cchhHHHHHHHHHHhCCC---CceEeccc----chHHHHHHHHHcCCCEEEECC
Confidence 45677888899999998832233 566777899999999864 55654211 224557888999999999954
No 425
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=74.77 E-value=9.5 Score=36.53 Aligned_cols=13 Identities=23% Similarity=0.105 Sum_probs=8.5
Q ss_pred HHHHHHHHHcCCC
Q 013498 425 HALKDRLKEVCQY 437 (442)
Q Consensus 425 ~~v~~~l~e~G~~ 437 (442)
..+...|+++|++
T Consensus 251 e~lv~~l~~~g~~ 263 (295)
T 1ydn_A 251 VAVVEMLHEMGFE 263 (295)
T ss_dssp HHHHHHHHHTTCB
T ss_pred HHHHHHHHhcCCC
Confidence 4555667777765
No 426
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=74.73 E-value=9.4 Score=36.62 Aligned_cols=126 Identities=14% Similarity=0.119 Sum_probs=84.4
Q ss_pred HHHHHHHHhHcCCCEEEEccCCCChh--HHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEE
Q 013498 103 KLDIARQLAKLGVDIIEAGFPAASKE--DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEvG~p~~~~~--d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v 180 (442)
-++.+....++|-|.|=+ +|..... ....++.|.+.+... .++-+. ++.+-++.+++. ..+.
T Consensus 55 pv~aA~~ae~aGAdGITv-HlReDrRHI~d~Dv~~L~~~i~t~--------lNlEma--~t~emi~ial~~----kP~~- 118 (278)
T 3gk0_A 55 PVRAALAAEDAGADAITL-HLREDRRHIVDADVRTLRPRVKTR--------MNLECA--VTPEMLDIACEI----RPHD- 118 (278)
T ss_dssp HHHHHHHHHHTTCSEEEE-ECCTTCSSSCHHHHHHHHHHCSSC--------EEEEEC--SSHHHHHHHHHH----CCSE-
T ss_pred HHHHHHHHHHcCCCEEEe-ccCCCcccCCHHHHHHHHHHcCCC--------EEeecC--CCHHHHHHHHHc----CCCE-
Confidence 466677777899999998 6643210 012344455443211 133332 367778888775 4444
Q ss_pred EEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 181 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 181 ~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
.+++|.....+...-|++.....+.+.+.|+..++.|+. |++-+ | .|+ +.++.+.+.|+++|-|
T Consensus 119 vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIr-VSLFI-D---pd~----~qI~aA~~~GAd~IEL 182 (278)
T 3gk0_A 119 ACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVR-VSLFI-D---PDE----AQIRAAHETGAPVIEL 182 (278)
T ss_dssp EEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCE-EEEEE-C---SCH----HHHHHHHHHTCSEEEE
T ss_pred EEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCE-EEEEe-C---CCH----HHHHHHHHhCcCEEEE
Confidence 466788877777777887777788999999999999994 77655 3 333 3567888899999988
No 427
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=74.57 E-value=61 Score=30.96 Aligned_cols=138 Identities=12% Similarity=0.104 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHHhHcCCC-EEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeee---cccchhhHHHHHHHHHh
Q 013498 99 TSKEKLDIARQLAKLGVD-IIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGL---SRCNERDIKTAWEAVKY 174 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~-~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~---~r~~~~dI~~a~e~l~~ 174 (442)
+.+...++++.+.+.||. ++|+ ....+...++.+.+...- ... .++--+.|. ..++.+++...++.+..
T Consensus 123 ~~~~~~~~~~~~~e~Gi~pE~e~----fd~g~l~~~~~l~~~Gl~--~~p-~~~~~vlGv~~g~~~~~~~l~~~~~~l~~ 195 (275)
T 3no5_A 123 PPELVDWLAAEMKTYGIKPEVEA----FDLSMIFQAAAMQAAGAI--VGP-LHIQFVMGIKNAMPVDREVLEFYVQTLKR 195 (275)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE----SSTHHHHHHHHHHHHTSS--CSS-CEEEEEECCTTSCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeeEEEE----EcHHHHHHHHHHHHCCCC--CCC-eeEEEEeCCCCCCCCCHHHHHHHHHHHHh
Confidence 678899999999999995 7888 345566666666665211 110 122112222 12345566555554421
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCC--------CCHHHHHHHHHHHHHc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGR--------SDRKFLYEILGEVIKV 246 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr--------~d~~~l~~~~~~~~~~ 246 (442)
.+-+......+... .+ ..++..+-.+|. .|++++||.-. ++.+.+.++++.+.++
T Consensus 196 ~~~~~~w~v~g~Gr-----------~~-----~p~~~~A~~~GG-hvRVGlEDnl~~~~G~~A~sNa~lV~~~~~i~~~~ 258 (275)
T 3no5_A 196 LSPDATWTGAGIGR-----------HQ-----LTMARWSLELGG-HCRTGLEDNVRLDKNTLAPSNAALVRQVAELCEEY 258 (275)
T ss_dssp HCTTCEEEEEECGG-----------GH-----HHHHHHHHHHTC-EEEESTTTCCBSSSSCBCSCHHHHHHHHHHHHHHT
T ss_pred CCCCCeEEEEecCH-----------hh-----HHHHHHHHHhCC-CeEEcCCcceeCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 12222222222221 11 257777888998 59999997432 4566777777777777
Q ss_pred CCcEEeccCcccccCHHHHHHHH
Q 013498 247 GATTLNIPDTVGITMPTEFGKLI 269 (442)
Q Consensus 247 Gad~I~laDT~G~~~P~~v~~li 269 (442)
|-. +++|.+.++++
T Consensus 259 gr~---------vAtp~eAR~iL 272 (275)
T 3no5_A 259 GRP---------VATAAQAREIM 272 (275)
T ss_dssp TCC---------BCCHHHHHHHT
T ss_pred CCC---------CCCHHHHHHHh
Confidence 753 57888888764
No 428
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=74.55 E-value=8.8 Score=38.00 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=63.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.++.++ +++++.|.+.|+..||=-+| ++|++..+.+.+..+ +|...+=.-.+..+++..++. ..
T Consensus 199 ~~~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~i~~---~~ 262 (375)
T 1r0m_A 199 AYTLAD-AGRLRQLDEYDLTYIEQPLA---WDDLVDHAELARRIR---------TPLCLDESVASASDARKALAL---GA 262 (375)
T ss_dssp CCCGGG-HHHHHTTGGGCCSCEECCSC---TTCSHHHHHHHHHCS---------SCEEESTTCCSHHHHHHHHHH---TS
T ss_pred CCCHHH-HHHHHHHHhCCCcEEECCCC---cccHHHHHHHHHhCC---------CCEEecCccCCHHHHHHHHHh---CC
Confidence 467788 99999999999999996443 456777777776532 232222122356677766654 24
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.+.|.+= .+ +-.-+..+.++++.|+++|+. +.++.
T Consensus 263 ~d~v~ik--~~-----------~~GGit~~~~i~~~A~~~g~~-~~~~~ 297 (375)
T 1r0m_A 263 GGVINLK--VA-----------RVGGHAESRRVHDVAQSFGAP-VWCGG 297 (375)
T ss_dssp CSEEEEC--TT-----------TTTSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCEEEEC--cc-----------hhcCHHHHHHHHHHHHHcCCc-EEecC
Confidence 5666541 11 112256677899999999996 55544
No 429
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=74.50 E-value=4.3 Score=37.36 Aligned_cols=70 Identities=14% Similarity=0.059 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..++++.+.+.|++.|.+.|-.|...+....++++.+++.+. +|+.+|.--.. ......++++||+.|..
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~----ipv~v~ggi~~---~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLD----VQVELSGGIRD---DESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHCS----SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhcC----CcEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 456777888899999999875544322211178888888763 67777644321 23467778899998854
No 430
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=74.44 E-value=5.2 Score=40.09 Aligned_cols=77 Identities=13% Similarity=0.121 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCcccccCHH-------HHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHH
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPT-------EFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGA 303 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~-------~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl 303 (442)
.+++.+.+.++.+ ++|+..|.|-+.-+...|+ ...+.|+.+++.++ +||.+=. --.|+....+..+.
T Consensus 135 ~~~~~~~~av~~~-~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~----vPVivK~-vG~g~s~~~A~~l~ 208 (368)
T 3vkj_A 135 YGLKEFQDAIQMI-EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELS----VPIIVKE-SGNGISMETAKLLY 208 (368)
T ss_dssp CCHHHHHHHHHHT-TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCS----SCEEEEC-SSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcC----CCEEEEe-CCCCCCHHHHHHHH
Confidence 5667776766666 6677777766544443332 36778899998874 5676652 11234567788999
Q ss_pred HhCCCEEEec
Q 013498 304 CAGARQVEVT 313 (442)
Q Consensus 304 ~aGa~~vd~T 313 (442)
++||+.|+++
T Consensus 209 ~aGad~I~V~ 218 (368)
T 3vkj_A 209 SYGIKNFDTS 218 (368)
T ss_dssp HTTCCEEECC
T ss_pred hCCCCEEEEe
Confidence 9999999965
No 431
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=74.39 E-value=8.9 Score=38.12 Aligned_cols=101 Identities=10% Similarity=0.119 Sum_probs=65.7
Q ss_pred CCCC-HHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 96 ATLT-SKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 96 ~~fs-~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
-.++ .++-+++++.|.+.|++.||=-.| +++++..+.+.+... +|.+.+=.-.+..+++..++.
T Consensus 202 ~~~~d~~~A~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~l~~--- 266 (374)
T 3sjn_A 202 SKWHTCGHSAMMAKRLEEFNLNWIEEPVL---ADSLISYEKLSRQVS---------QKIAGGESLTTRYEFQEFITK--- 266 (374)
T ss_dssp TTTCSHHHHHHHHHHSGGGCCSEEECSSC---TTCHHHHHHHHHHCS---------SEEEECTTCCHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHhhhcCceEEECCCC---cccHHHHHHHHhhCC---------CCEEeCCCcCCHHHHHHHHHc---
Confidence 3578 999999999999999999997443 456777888777532 243332222245666666654
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..++.|.+= . ++-.-+..+++++..|+..|+. +..+.
T Consensus 267 ~~~d~v~~k--~-----------~~~GGit~~~~ia~~A~~~gi~-~~~h~ 303 (374)
T 3sjn_A 267 SNADIVQPD--I-----------TRCGGITEMKKIYDIAQMNGTQ-LIPHG 303 (374)
T ss_dssp HCCSEECCB--T-----------TTSSHHHHHHHHHHHHHHHTCE-ECCBC
T ss_pred CCCCEEEeC--c-----------cccCCHHHHHHHHHHHHHcCCE-EEecC
Confidence 245555431 1 1112366778899999999985 66655
No 432
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=74.38 E-value=24 Score=34.40 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=21.9
Q ss_pred HHHHHHhHcCCCEEEEccC---CCChhHHH-----HHHHHHHHh
Q 013498 105 DIARQLAKLGVDIIEAGFP---AASKEDFE-----AVRTIAKEV 140 (442)
Q Consensus 105 ~ia~~L~~~GV~~IEvG~p---~~~~~d~e-----~v~~l~~~~ 140 (442)
++++.+.++|++.|.+.-+ ..++++++ .++++.+.+
T Consensus 197 ~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i 240 (353)
T 1j93_A 197 KYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSV 240 (353)
T ss_dssp HHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHH
Confidence 3455666889999988633 24676643 445555444
No 433
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=74.33 E-value=9.3 Score=38.19 Aligned_cols=106 Identities=16% Similarity=0.115 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|+..||=-+| ++|++.++.+++. .-+|...+=.-.+..|++..++.
T Consensus 200 n~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~~~~--- 264 (385)
T 3i6e_A 200 NQGLEIDEAVPRVLDVAQFQPDFIEQPVR---AHHFELMARLRGL---------TDVPLLADESVYGPEDMVRAAHE--- 264 (385)
T ss_dssp TTCCCGGGHHHHHHHHHTTCCSCEECCSC---TTCHHHHHHHHTT---------CSSCEEESTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHHh---------CCCCEEEeCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++-.-+..++++++.|++.|+. +..+.+..+
T Consensus 265 ~~~d~v~~-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~~~~~es 305 (385)
T 3i6e_A 265 GICDGVSI-------------KIMKSGGLTRAQTVARIAAAHGLM-AYGGDMFEA 305 (385)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCCSCC
T ss_pred CCCCEEEe-------------cccccCCHHHHHHHHHHHHHcCCE-EEeCCCCcc
No 434
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=74.23 E-value=72 Score=31.60 Aligned_cols=178 Identities=13% Similarity=0.003 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
.+.++..+-++...+.|++.+-+=......+|.+.++.+++.++... ...+=+..+.+.++..+..+.+...+.
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a~g~~~------~L~vDaN~~w~~~~A~~~~~~l~~~~~ 214 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNEFSKNI------KFRFDANQGWNLAQTKQFIEEINKYSL 214 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHCCTTS------EEEEECTTCCCHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHhcCCCC------eEEEeCCCCcCHHHHHHHHHHHhhcCC
Confidence 36777788888888889998877322223467889999988765321 112222233345554444555655222
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEeccCc
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDT 256 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~laDT 256 (442)
....+--|+.+- ....+.+..+..++. |.. |.+-.++..+. .+.+.| +|.|.+ |.
T Consensus 215 ~l~~iEeP~~~~---------------d~~~~~~l~~~~~iP-Ia~---dE~~~~~~~~~----~~i~~~a~d~v~~-k~ 270 (379)
T 3r0u_A 215 NVEIIEQPVKYY---------------DIKAMAEITKFSNIP-VVA---DESVFDAKDAE----RVIDEQACNMINI-KL 270 (379)
T ss_dssp CEEEEECCSCTT---------------CHHHHHHHHHHCSSC-EEE---STTCSSHHHHH----HHHHTTCCSEEEE-CH
T ss_pred CcEEEECCCCcc---------------cHHHHHHHHhcCCCC-EEe---CCccCCHHHHH----HHHHcCCCCEEEE-Cc
Confidence 222333444321 111233334456664 554 33445555443 344566 455544 55
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH--HHHHhCCCEEE
Q 013498 257 VGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI--AGACAGARQVE 311 (442)
Q Consensus 257 ~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal--aAl~aGa~~vd 311 (442)
.-+.-..+..++....++. ++++.+||-...+++++-++ +|. -++.++|
T Consensus 271 ~~~GGi~~~~~ia~~A~~~-----gi~~~~~~~~es~i~~aa~~hlaaa-p~~~~~e 321 (379)
T 3r0u_A 271 AKTGGILEAQKIKKLADSA-----GISCMVGCMMESPAGILATASFALA-EDITVAD 321 (379)
T ss_dssp HHHTSHHHHHHHHHHHHHT-----TCEEEECCCSCCHHHHHHHHHHHHH-TTCCCBC
T ss_pred cccCCHHHHHHHHHHHHHc-----CCEEEEeCCCccHHHHHHHHHHHhC-CCCCeee
Confidence 4333444555555555543 37788888766776665544 333 4455543
No 435
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=74.21 E-value=72 Score=31.61 Aligned_cols=178 Identities=13% Similarity=0.092 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.-+.++..+-++.+.+.|++.|.+=......+|.+.++.+++.++... ...+=+....+.++..+..+.+...+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~------~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADV------EILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTS------EEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCc------eEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 457888889999999999999887332223457889999888765421 11122222334555544556666778
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHH-HHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEecc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFA-RSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIP 254 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a-r~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~la 254 (442)
+..|.=.++..+ ++. +.+.. +..++. |.. |.+-.+++.+ +.+.+.| +|.|.+
T Consensus 223 i~~iEqP~~~~d--------------~~~---~~~l~~~~~~iP-Ia~---dE~i~~~~~~----~~~i~~~~~d~v~i- 276 (389)
T 3ozy_A 223 CYWFEEPLSIDD--------------IEG---HRILRAQGTPVR-IAT---GENLYTRNAF----NDYIRNDAIDVLQA- 276 (389)
T ss_dssp CSEEESCSCTTC--------------HHH---HHHHHTTCCSSE-EEE---CTTCCHHHHH----HHHHHTTCCSEECC-
T ss_pred CCEEECCCCccc--------------HHH---HHHHHhcCCCCC-EEe---CCCCCCHHHH----HHHHHcCCCCEEEe-
Confidence 877753222111 121 21222 223442 433 3344444433 3444555 565555
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH--HHHHhCCCEEEe
Q 013498 255 DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI--AGACAGARQVEV 312 (442)
Q Consensus 255 DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal--aAl~aGa~~vd~ 312 (442)
|..=+.-..+..++....++. ++++..|+. ..+++++-++ +|..-.+.+++.
T Consensus 277 k~~~~GGit~~~~ia~~A~~~-----gi~~~~h~~-~~~i~~aa~~hlaaa~~~~~~~e~ 330 (389)
T 3ozy_A 277 DASRAGGITEALAISASAASA-----HLAWNPHTF-NDIITVAANLHLVAASPHPAMFEW 330 (389)
T ss_dssp CTTTSSCHHHHHHHHHHHHHT-----TCEECCCCT-TSHHHHHHHHHHHHHCCSCCCEEE
T ss_pred CccccCCHHHHHHHHHHHHHc-----CCEEEecCC-CcHHHHHHHHHHHHhCCCCeeEEe
Confidence 666666677777777766664 367888865 3555554433 333334444543
No 436
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=74.17 E-value=32 Score=34.10 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=30.7
Q ss_pred hHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHcC
Q 013498 164 DIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLG 217 (442)
Q Consensus 164 dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~G 217 (442)
.++++++.....|.+.|.+........ .....+ .+..++.+.+++++|++.|
T Consensus 117 ~~~~~i~~A~~LGa~~vvv~~G~~g~~--~~~~~~~~~~~~~~~e~L~~l~~~A~~~G 172 (394)
T 1xla_A 117 KVLHNIDLAAEMGAETFVMWGGREGSE--YDGSKDLAAALDRMREGVDTAAGYIKDKG 172 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEECCTTCEES--SGGGCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCccc--cccccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 345566766778999887754321000 000112 3455677778888999999
No 437
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=73.90 E-value=14 Score=33.59 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=34.4
Q ss_pred HHHHHHHHHHcCCcEEeccCccccc-CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGIT-MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~-~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..++++.+.+.|++.|.+.|..+.. ......++++.+++.+. +++.+|.--.. ...+..++++||+.|..
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~----ipvi~~g~i~~---~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS----IPVLVGGGVRS---LEDATTLFRAGADKVSV 105 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS----SCEEEESSCCS---HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC----CCEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 4455566666666666666554432 11223455666665542 44544431110 12345555666666653
No 438
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=73.83 E-value=38 Score=31.62 Aligned_cols=146 Identities=12% Similarity=0.044 Sum_probs=82.9
Q ss_pred chhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCe-EEEccCCCCCCCHHHHHH
Q 013498 161 NERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL-GCDD-VEFSPEDAGRSDRKFLYE 238 (442)
Q Consensus 161 ~~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~-V~f~~edasr~d~~~l~~ 238 (442)
..+||+...+.....|+..|.++ +.+ + .+.+ +.+.. +..- ...+++. +..+.+-...
T Consensus 34 t~~~i~~l~~~a~~~~~~aVcv~----p~~------------v-~a~~---~l~~~~~v~v~tvigFP~-G~~~~~~k~~ 92 (234)
T 1n7k_A 34 TEEDVRNLVREASDYGFRCAVLT----PVY------------T-VKIS---GLAEKLGVKLCSVIGFPL-GQAPLEVKLV 92 (234)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEC----HHH------------H-HHHH---HHHHHHTCCEEEEESTTT-CCSCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEc----hHH------------h-eeeh---HhCCCCCceEEEEeCCCC-CCCcHHHHHH
Confidence 56777776665555677766542 211 1 2222 22233 4431 1234433 3455566667
Q ss_pred HHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCC--Cc-ceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccc
Q 013498 239 ILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPG--IE-NVVISTHCQNDLGLSTANTIAGACAGARQVEVTIN 315 (442)
Q Consensus 239 ~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~--~~-~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~ 315 (442)
-++.+++.|||.|-+.=-.|...- .+.+-+..+++..++ .. ++.++.-..++- .=.--+..|.++|||+|-++.+
T Consensus 93 e~~~Av~~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e-~i~~a~ria~eaGADfVKTsTG 170 (234)
T 1n7k_A 93 EAQTVLEAGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPLWDDK-TLSLLVDSSRRAGADIVKTSTG 170 (234)
T ss_dssp HHHHHHHHTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHH-HHHHHHHHHHHTTCSEEESCCS
T ss_pred HHHHHHHcCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHH-HHHHHHHHHHHhCCCEEEeCCC
Confidence 778888999999877766776655 777777777664321 10 123444333332 2233556788999999999863
Q ss_pred ccccccCcccHHHHHH
Q 013498 316 GIGERAGNASLEEVVM 331 (442)
Q Consensus 316 GlGeraGNa~lEevv~ 331 (442)
--+ +|++..|++-.
T Consensus 171 ~~~--~~gAt~~dv~l 184 (234)
T 1n7k_A 171 VYT--KGGDPVTVFRL 184 (234)
T ss_dssp SSC--CCCSHHHHHHH
T ss_pred CCC--CCCCCHHHHHH
Confidence 211 15677777543
No 439
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=73.79 E-value=12 Score=35.46 Aligned_cols=91 Identities=14% Similarity=0.086 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEecc-CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHh--CCC
Q 013498 232 DRKFLYEILGEVIKVGATTLNIP-DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACA--GAR 308 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~la-DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~a--Ga~ 308 (442)
+++.+.+.++...+.|||.|-+. .....-.++++.+++..+++.. +++|++=+=+ ..-+.+|+++ |++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~----~~pisIDT~~-----~~v~~aAl~a~~Ga~ 93 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS----NLTLCLDSTN-----IKAIEAGLKKCKNRA 93 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC----CSEEEEECSC-----HHHHHHHHHHCSSCE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC----CCeEEEeCCC-----HHHHHHHHhhCCCCC
Confidence 56778888888888888887765 2233556778888888888754 3778875543 3445577777 999
Q ss_pred EEEecccccccccCcccHHHHHHHHHhcc
Q 013498 309 QVEVTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 309 ~vd~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
.|+.--++ .-+.++++......+
T Consensus 94 iINdvs~~------~d~~~~~~~~~a~~~ 116 (262)
T 1f6y_A 94 MINSTNAE------REKVEKLFPLAVEHG 116 (262)
T ss_dssp EEEEECSC------HHHHHHHHHHHHHTT
T ss_pred EEEECCCC------cccHHHHHHHHHHhC
Confidence 98643322 134455655555544
No 440
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=73.79 E-value=14 Score=35.39 Aligned_cols=97 Identities=11% Similarity=-0.015 Sum_probs=64.9
Q ss_pred hCCCCEEEEeecCChHHHHHHhC------CCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLR------KTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG 247 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~------~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G 247 (442)
.+|++.|.+ ..|- -+ ..+| .|.++.+..++...+-+ ....|...+++.+..+++...+.+.++.++|
T Consensus 35 ~aG~d~ilv--Gdsl-~~-~~lG~~dt~~vtldemi~h~~aV~r~~---~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaG 107 (264)
T 1m3u_A 35 DEGLNVMLV--GDSL-GM-TVQGHDSTLPVTVADIAYHTAAVRRGA---PNCLLLADLPFMAYATPEQAFENAATVMRAG 107 (264)
T ss_dssp HHTCCEEEE--CTTH-HH-HTTCCSSSTTCCHHHHHHHHHHHHHHC---TTSEEEEECCTTSSSSHHHHHHHHHHHHHTT
T ss_pred HcCCCEEEE--CHHH-HH-HHcCCCCCCCcCHHHHHHHHHHHHhhC---CCCcEEEECCCCCcCCHHHHHHHHHHHHHcC
Confidence 358888755 3232 11 1233 56788777666554432 2223567777766669999999999999999
Q ss_pred CcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee
Q 013498 248 ATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC 288 (442)
Q Consensus 248 ad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~ 288 (442)
++.|.|-|. .++.+.|+.+.+. .+|+--|.
T Consensus 108 a~aVklEgg------~e~~~~I~al~~a-----gipV~gHi 137 (264)
T 1m3u_A 108 ANMVKIEGG------EWLVETVQMLTER-----AVPVCGHL 137 (264)
T ss_dssp CSEEECCCS------GGGHHHHHHHHHT-----TCCEEEEE
T ss_pred CCEEEECCc------HHHHHHHHHHHHC-----CCCeEeee
Confidence 999999997 3677788888764 25666664
No 441
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=73.75 E-value=19 Score=33.88 Aligned_cols=115 Identities=6% Similarity=-0.080 Sum_probs=67.0
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-CCC---CCC---CHHH
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-EDA---GRS---DRKF 235 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~-eda---sr~---d~~~ 235 (442)
.+++..++.++..|.+.|.++.. +..-...... .+.++.+.+++.|++.+.+++ .+. ... ..+.
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~--~~~~~~~~~~-------~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~ 106 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAE--NYVDALAAGL-------TDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKK 106 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHH--HHHHHHHTTC-------CHHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCHH--HHHHHHhcCC-------cHHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHH
Confidence 46777777778889999998753 1110000111 233456677889986333332 111 111 1356
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecC
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQN 290 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HN 290 (442)
+.+.++.+.+.|++.|.+.-. +......+.+.++.+.+... ++.|.+|.|+
T Consensus 107 ~~~~i~~A~~lGa~~v~~g~~-~~~~~~~~~~~l~~l~~~a~---Gv~l~lE~~~ 157 (296)
T 2g0w_A 107 EQTTFHMARLFGVKHINCGLL-EKIPEEQIIVALGELCDRAE---ELIIGLEFMP 157 (296)
T ss_dssp HHHHHHHHHHHTCCEEEECCC-SCCCHHHHHHHHHHHHHHHT---TSEEEEECCT
T ss_pred HHHHHHHHHHcCCCEEEEcCC-CCCCHHHHHHHHHHHHHHhc---CCEEEEEecC
Confidence 778888899999999877321 22233445555555544432 4789998886
No 442
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=73.57 E-value=24 Score=35.41 Aligned_cols=104 Identities=12% Similarity=0.171 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++.+++++.|++.|+..||=-.| |++..+.+++. .-+|...+=.-.+..+++..++.
T Consensus 220 N~~w~~~~A~~~~~~l~~~~i~~iEqP~~-----d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 282 (398)
T 4dye_A 220 NAAWSVPDSVRAGIALEELDLEYLEDPCV-----GIEGMAQVKAK---------VRIPLCTNMCVVRFEDFAPAMRL--- 282 (398)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSS-----HHHHHHHHHHH---------CCSCEEESSSCCSGGGHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEcCCCC-----CHHHHHHHHhh---------CCCCEEeCCcCCCHHHHHHHHHh---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++-.-+..+++++..|++.|+. +..+....+
T Consensus 283 ~a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~~~e~ 323 (398)
T 4dye_A 283 NAVDVIHG-------------DVYKWGGIAATKALAAHCETFGLG-MNLHSGGEL 323 (398)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEECCSCCC
T ss_pred CCCCEEEe-------------CccccCCHHHHHHHHHHHHHcCCe-EEEcCCcch
No 443
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=73.50 E-value=8.8 Score=38.49 Aligned_cols=103 Identities=9% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+..++.++.+++++.|++.|++.||--+| +++++..+++.+. .-+|.+.+=.-.+..+++..++.
T Consensus 226 n~~~~~~~ai~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 290 (410)
T 2gl5_A 226 HSLLGTNSAIQFAKAIEKYRIFLYEEPIH---PLNSDNMQKVSRS---------TTIPIATGERSYTRWGYRELLEK--- 290 (410)
T ss_dssp TTCSCHHHHHHHHHHHGGGCEEEEECSSC---SSCHHHHHHHHHH---------CSSCEEECTTCCTTHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeEECCCC---hhhHHHHHHHHhh---------CCCCEEecCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|. ++.++-.-+..+++++++|++.|+. +..+..
T Consensus 291 ~~~d~v~-------------ik~~~~GGit~~~~ia~~A~~~gi~-~~~h~~ 328 (410)
T 2gl5_A 291 QSIAVAQ-------------PDLCLCGGITEGKKICDYANIYDTT-VQVHVC 328 (410)
T ss_dssp TCCSEEC-------------CCTTTTTHHHHHHHHHHHHHTTTCE-ECCCCC
T ss_pred CCCCEEe-------------cCccccCCHHHHHHHHHHHHHcCCe-EeecCC
No 444
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=73.46 E-value=13 Score=37.05 Aligned_cols=103 Identities=16% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|+..||=-.| +++++..+.+++. .-+|...+=.-.+..|++..++.
T Consensus 221 N~~~~~~~A~~~~~~l~~~~i~~iEeP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 285 (383)
T 3toy_A 221 NQSLDPAEATRRIARLADYDLTWIEEPVP---QENLSGHAAVRER---------SEIPIQAGENWWFPRGFAEAIAA--- 285 (383)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHH---------CSSCEEECTTCCHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEECCCC---cchHHHHHHHHhh---------cCCCEEeCCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|. .+.++-.-+..++++++.|++.|+. +....+
T Consensus 286 ~a~d~v~-------------ik~~~~GGit~~~~ia~~A~~~gi~-~~~h~~ 323 (383)
T 3toy_A 286 GASDFIM-------------PDLMKVGGITGWLNVAGQADAASIP-MSSHIL 323 (383)
T ss_dssp TCCSEEC-------------CCTTTTTHHHHHHHHHHHHHHHTCC-BCCCSC
T ss_pred CCCCEEE-------------eCccccCCHHHHHHHHHHHHHcCCE-EeecCH
No 445
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=73.37 E-value=8.5 Score=38.29 Aligned_cols=106 Identities=18% Similarity=0.169 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|+..||=-.| +++++..+.+++. .-+|...+=.-.+..|++..++.
T Consensus 199 n~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~ipIa~dE~~~~~~~~~~~i~~--- 263 (377)
T 3my9_A 199 NQALTPFGAMKILRDVDAFRPTFIEQPVP---RRHLDAMAGFAAA---------LDTPILADESCFDAVDLMEVVRR--- 263 (377)
T ss_dssp TTCCCTTTHHHHHHHHHTTCCSCEECCSC---TTCHHHHHHHHHH---------CSSCEEESTTCSSHHHHHHHHHH---
T ss_pred CCCcCHHHHHHHHHHHhhcCCCEEECCCC---ccCHHHHHHHHHh---------CCCCEEECCccCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|. .+.++-.-+..+++++.+|+++|+. +..+.+..+
T Consensus 264 ~~~d~v~-------------~k~~~~GGit~~~~i~~~a~~~gi~-~~~~~~~es 304 (377)
T 3my9_A 264 QAADAIS-------------VKIMKCGGLMKAQSLMAIADTAGLP-GYGGTLWEG 304 (377)
T ss_dssp TCCSEEE-------------CCHHHHTSHHHHHHHHHHHHHHTCC-EECCEECCS
T ss_pred CCCCEEE-------------ecccccCCHHHHHHHHHHHHHcCCe-EecCCCCCc
No 446
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=73.12 E-value=11 Score=38.16 Aligned_cols=101 Identities=18% Similarity=0.194 Sum_probs=65.9
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++.+++++.|.+.|++.||--.| +++++..+.+++... +|.+.+=.-.+..+++..++. .
T Consensus 235 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---g 299 (424)
T 3v3w_A 235 HRLTPIEAARLGKALEPYHLFWMEDAVP---AENQESFKLIRQHTT---------TPLAVGEVFNSIHDCRELIQN---Q 299 (424)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEECCSC---CSSTTHHHHHHHHCC---------SCEEECTTCCSGGGTHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCC---hHhHHHHHHHHhhCC---------CCEEEccCcCCHHHHHHHHHc---C
Confidence 3578999999999999999999997444 345666777776532 243333222356677766653 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+ +.++-.-+..+++++..|++.|+. +....
T Consensus 300 a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 335 (424)
T 3v3w_A 300 WIDYIRT-------------TIVHAGGISQMRRIADFASLFHVR-TGFHG 335 (424)
T ss_dssp CCSEECC-------------CTTTTTHHHHHHHHHHHHHTTTCE-EEECC
T ss_pred CCCeEee-------------cchhcCCHHHHHHHHHHHHHcCCE-EEecC
Confidence 3555443 112223466778899999999985 76655
No 447
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=73.06 E-value=10 Score=37.43 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.++.++ +++++.|++.|++.||=-+| +++++..+.+.+... +|.+.+=.-.+.++++..++. ..
T Consensus 193 ~~~~~~-~~~~~~l~~~~i~~iE~P~~---~~~~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~i~~---~~ 256 (368)
T 1sjd_A 193 AYTLGD-APQLARLDPFGLLLIEQPLE---EEDVLGHAELARRIQ---------TPICLDESIVSARAAADAIKL---GA 256 (368)
T ss_dssp CCCGGG-HHHHHTTGGGCCSEEECCSC---TTCHHHHHHHHTTCS---------SCEEESTTCCSHHHHHHHHHT---TC
T ss_pred CCCHHH-HHHHHHHHhcCCCeEeCCCC---hhhHHHHHHHHHhCC---------CCEEECCCcCCHHHHHHHHHc---CC
Confidence 467888 99999999999999996443 456777777765421 232222111345666666553 24
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.+.|.+ ..+ +-.-+..+.++++.|+++|+. +.++.
T Consensus 257 ~d~v~i--k~~-----------~~GGit~~~~i~~~A~~~g~~-~~~~~ 291 (368)
T 1sjd_A 257 VQIVNI--KPG-----------RVGGYLEARRVHDVCAAHGIP-VWCGG 291 (368)
T ss_dssp CSEEEE--CTT-----------TTTSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCEEEe--ccc-----------ccCCHHHHHHHHHHHHHcCCc-EEeCC
Confidence 566554 111 112256677899999999986 55554
No 448
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=73.03 E-value=19 Score=35.64 Aligned_cols=119 Identities=13% Similarity=0.136 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHH--hHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHH
Q 013498 95 GATLTSKEKLDIARQL--AKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAV 172 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L--~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l 172 (442)
+-.++.++.+++++.| .+.++..||= | ..++|++.++.+++. .-+|...+=.-.+..|+...++.
T Consensus 195 N~~~~~~~A~~~~~~L~~~~~~i~~iEe--P-~~~~d~~~~~~l~~~---------~~ipIa~dE~~~~~~~~~~~i~~- 261 (365)
T 3ik4_A 195 NCGYDVERALAFCAACKAESIPMVLFEQ--P-LPREDWAGMAQVTAQ---------SGFAVAADESARSAHDVLRIARE- 261 (365)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEEEEC--C-SCTTCHHHHHHHHHH---------SSSCEEESTTCSSHHHHHHHHHH-
T ss_pred CCCCCHHHHHHHHHHHhhCCCCceEEEC--C-CCcccHHHHHHHHhh---------CCCCEEECCCCCCHHHHHHHHHh-
Q ss_pred HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHH
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEV 243 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~ 243 (442)
..++.|.+ +.++ .-+..+.++++.|++.|+. +.++.+..+.........++..+
T Consensus 262 --~a~d~v~i-------------k~~~-GGit~~~~i~~~A~~~gi~-~~~~~~~es~ig~aa~~hlaaa~ 315 (365)
T 3ik4_A 262 --GTASVINI-------------KLMK-AGVAEGLKMIAIAQAAGLG-LMIGGMVESILAMSFSANLAAGN 315 (365)
T ss_dssp --TCCSEEEE-------------CHHH-HCHHHHHHHHHHHHHHTCE-EEECCSSCCHHHHHHHHHHHHHH
T ss_pred --CCCCEEEE-------------cCCc-cCHHHHHHHHHHHHHcCCe-EEecCCcccHHHHHHHHHHHHhC
No 449
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=72.95 E-value=5 Score=40.05 Aligned_cols=87 Identities=18% Similarity=0.153 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCcEEeccCcc-cccCHHHHHHHH----HHHHHhCCCCc---ceeEEEeecCCcchHHHHHHHHHHhC
Q 013498 235 FLYEILGEVIKVGATTLNIPDTV-GITMPTEFGKLI----ADIKANTPGIE---NVVISTHCQNDLGLSTANTIAGACAG 306 (442)
Q Consensus 235 ~l~~~~~~~~~~Gad~I~laDT~-G~~~P~~v~~li----~~l~~~~p~~~---~v~i~~H~HNDlGLA~ANalaAl~aG 306 (442)
.+.++++...++||+.|.+.|+. |.+.|..+.+++ +.+.+.+.... ++++-.||.+. +.-+. .-.+.|
T Consensus 198 ~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~-~~~l~---~l~~~g 273 (368)
T 4exq_A 198 AVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG-GLWLE---DLAATG 273 (368)
T ss_dssp HHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC-GGGHH---HHHTSS
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc-HHHHH---HHHHhC
Confidence 34445555667899999988876 668888877655 33333343210 26777788765 32221 123679
Q ss_pred CCEEEecccccccccCcccHHHHHHHH
Q 013498 307 ARQVEVTINGIGERAGNASLEEVVMAF 333 (442)
Q Consensus 307 a~~vd~Tv~GlGeraGNa~lEevv~~L 333 (442)
++.++.- . ..+++++...+
T Consensus 274 ~d~i~~d-----~---~~dl~~ak~~~ 292 (368)
T 4exq_A 274 VDAVGLD-----W---TVNLGRARERV 292 (368)
T ss_dssp CSEEECC-----T---TSCHHHHHHHH
T ss_pred CCEEeeC-----C---CCCHHHHHHHh
Confidence 9987542 1 24666665444
No 450
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=72.93 E-value=75 Score=31.25 Aligned_cols=163 Identities=15% Similarity=0.084 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++..+-++.+.+.|++.|++-.......+.+.++.+++.++ ... ..+-+....+.++....++.+...|++
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g-d~~------l~vD~n~~~~~~~a~~~~~~l~~~~i~ 219 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEITAAVRGEIG-DAR------LRLDANEGWSVHDAINMCRKLEKYDIE 219 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHTTST-TCE------EEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHHHHHHHHcC-CcE------EEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 5677778888888999999998432222346678888777654 211 122222223445544455666667887
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEeccCcc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDTV 257 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~laDT~ 257 (442)
.|.-.++..+ ++.+ .+..+..++. |.. |.+-.+++.+.+ +.+.| +|.|.+ |..
T Consensus 220 ~iEqP~~~~~--------------~~~~---~~l~~~~~iP-I~~---de~i~~~~~~~~----~i~~~~~d~v~i-k~~ 273 (384)
T 2pgw_A 220 FIEQPTVSWS--------------IPAM---AHVREKVGIP-IVA---DQAAFTLYDVYE----ICRQRAADMICI-GPR 273 (384)
T ss_dssp EEECCSCTTC--------------HHHH---HHHHHHCSSC-EEE---STTCCSHHHHHH----HHHTTCCSEEEE-CHH
T ss_pred EEeCCCChhh--------------HHHH---HHHHhhCCCC-EEE---eCCcCCHHHHHH----HHHcCCCCEEEE-cch
Confidence 7653222111 2211 1222334554 443 333345554433 33455 666665 555
Q ss_pred cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 258 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 258 G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
=+.-+.+..++....++. ++++.+|+-...+++++-+
T Consensus 274 ~~GGit~~~~i~~~A~~~-----g~~~~~~~~~es~i~~aa~ 310 (384)
T 2pgw_A 274 EIGGIQPMMKAAAVAEAA-----GLKICIHSSFTTGITTCAE 310 (384)
T ss_dssp HHTSHHHHHHHHHHHHHT-----TCCEEECCCSCCHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHC-----CCeEeeccCcCCHHHHHHH
Confidence 555677777777776664 3678888756666666533
No 451
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=72.92 E-value=46 Score=32.76 Aligned_cols=144 Identities=15% Similarity=0.171 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEcc----CCC-C----hhHHHHHHHHHHHhcccccccCCccceEee------------e
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGF----PAA-S----KEDFEAVRTIAKEVGNAVDAESGYVPVICG------------L 157 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~----p~~-~----~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~------------~ 157 (442)
+.+++++ .+.++|++.||+.. |.. . +.+.+.++.+.+..+-.+ ..+.. +
T Consensus 34 ~~~e~l~---~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i-------~~~~~~~~~~p~~~~g~l 103 (386)
T 1muw_A 34 DPVETVQ---RLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTV-------PMATTNLFTHPVFKDGGF 103 (386)
T ss_dssp CHHHHHH---HHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBC-------CEEECCCSSSGGGTTCST
T ss_pred CHHHHHH---HHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeE-------EEEecccccccccccCCC
Confidence 4566554 45566999999964 322 1 234556666555433221 11111 1
Q ss_pred cccch-------hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCC----HHHHHHHHHHHHHHHHHcCCC-eEEEcc
Q 013498 158 SRCNE-------RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKT----KQQVVEIARSMVKFARSLGCD-DVEFSP 225 (442)
Q Consensus 158 ~r~~~-------~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s----~~e~l~~~~~~v~~ar~~G~~-~V~f~~ 225 (442)
+-... +.++.+++.....|.+.|.+....... ......+ .+...+.+.+++++|++.|.. .+.+-.
T Consensus 104 ~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~ 181 (386)
T 1muw_A 104 TANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGA--ESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEP 181 (386)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE--SSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcc--cccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 11111 234555666666788887765332100 0000122 245567777888889999931 244422
Q ss_pred CCC------CCCCHHHHHHHHHHHHHcCCc-EEe-ccCcc
Q 013498 226 EDA------GRSDRKFLYEILGEVIKVGAT-TLN-IPDTV 257 (442)
Q Consensus 226 eda------sr~d~~~l~~~~~~~~~~Gad-~I~-laDT~ 257 (442)
... .-.+.+.+.++++ +.+-. .+. .-||.
T Consensus 182 ~~~e~~~~~~~~t~~~~~~li~---~v~~pn~vgl~lD~~ 218 (386)
T 1muw_A 182 KPNEPRGDILLPTVGHALAFIE---RLERPELYGVNPEVG 218 (386)
T ss_dssp CSSSSSSEESSCSHHHHHHHHT---TSSSGGGEEECCBHH
T ss_pred CCCCCcccccCCCHHHHHHHHH---HhCCccceEEEeecc
Confidence 111 1135666666554 34543 233 33773
No 452
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=72.92 E-value=65 Score=30.50 Aligned_cols=167 Identities=17% Similarity=0.127 Sum_probs=85.4
Q ss_pred HHHHHHhCCCCEEEEeecCChHH-----HH------HHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEEccCCCCCCCHHH
Q 013498 168 AWEAVKYAKRPRIHTFIATSGIH-----ME------HKLRKTKQQVVEIARSMVKFARSL-GCDDVEFSPEDAGRSDRKF 235 (442)
Q Consensus 168 a~e~l~~~g~~~v~i~~~~Sd~h-----~~------~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f~~edasr~d~~~ 235 (442)
.++.+..+ +|.|.+=+|-||.. ++ .+-|++.+..+ +.++..|+. ... +.+ + +..++-+
T Consensus 35 ~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~----~~v~~ir~~~~~P-ii~--m--~y~n~v~ 104 (271)
T 1ujp_A 35 AVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGAL----ELVREVRALTEKP-LFL--M--TYLNPVL 104 (271)
T ss_dssp HHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHH----HHHHHHHHHCCSC-EEE--E--CCHHHHH
T ss_pred HHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHH----HHHHHHHhcCCCC-EEE--E--ecCcHHH
Confidence 34445555 77777766666521 11 23355555444 445555655 343 322 1 2233222
Q ss_pred ---HHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 ---LYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 ---l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
+.++++.+.++|+|.+.++|-. +++..++++.++++- ++.+. +-.++ .-..-.-.+++...|..++.
T Consensus 105 ~~g~~~f~~~~~~aG~dGviv~Dl~----~ee~~~~~~~~~~~g--l~~i~--liap~-s~~eri~~ia~~~~gfiy~v- 174 (271)
T 1ujp_A 105 AWGPERFFGLFKQAGATGVILPDLP----PDEDPGLVRLAQEIG--LETVF--LLAPT-STDARIATVVRHATGFVYAV- 174 (271)
T ss_dssp HHCHHHHHHHHHHHTCCEEECTTCC----GGGCHHHHHHHHHHT--CEEEC--EECTT-CCHHHHHHHHTTCCSCEEEE-
T ss_pred HhhHHHHHHHHHHcCCCEEEecCCC----HHHHHHHHHHHHHcC--CceEE--EeCCC-CCHHHHHHHHHhCCCCEEEE-
Confidence 2577888899999999998865 588888999988762 11122 22333 22234455666666777666
Q ss_pred cccc-cccccCc-ccHHHHHHHHHhccccccCCccCCCC-hhHHHH
Q 013498 313 TING-IGERAGN-ASLEEVVMAFKCRGEHILGGLYTGIN-TRHIVM 355 (442)
Q Consensus 313 Tv~G-lGeraGN-a~lEevv~~L~~~g~~~~~G~~tgid-l~~L~~ 355 (442)
|+.| -|.+.+. .++++++..++....- .--+.-||+ .+...+
T Consensus 175 s~~G~TG~~~~~~~~~~~~v~~vr~~~~~-Pv~vGfGI~t~e~a~~ 219 (271)
T 1ujp_A 175 SVTGVTGMRERLPEEVKDLVRRIKARTAL-PVAVGFGVSGKATAAQ 219 (271)
T ss_dssp CC------------CCHHHHHHHHTTCCS-CEEEESCCCSHHHHHH
T ss_pred ecCcccCCCCCCCccHHHHHHHHHhhcCC-CEEEEcCCCCHHHHHH
Confidence 5443 3445442 2445666666654211 011234665 566544
No 453
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=72.85 E-value=4.4 Score=37.40 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCcEEeccCccccc--CHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGIT--MPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~--~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..++++.+.++|++.|.+.|-.|.. .+.. ++++.+++.+. +|+.+|.--.. ......++++||+.|..
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~----ipv~v~ggI~~---~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMD----IKVELSGGIRD---DDTLAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCS----SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcC----CcEEEECCcCC---HHHHHHHHHcCCCEEEE
Confidence 4466788888999999998755442 2222 78888888763 67887754321 23466778899998764
No 454
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=72.75 E-value=11 Score=37.79 Aligned_cols=101 Identities=17% Similarity=0.213 Sum_probs=65.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++-+++++.|++.|+..||=-.| +++++..+.+++..+ +|...+=.-.+..|++..++. .
T Consensus 228 ~~~~~~~A~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---~ 292 (390)
T 3ugv_A 228 QGLDMAEAMHRTRQIDDLGLEWIEEPVV---YDNFDGYAQLRHDLK---------TPLMIGENFYGPREMHQALQA---G 292 (390)
T ss_dssp TCCCHHHHHHHHHHHTTSCCSEEECCSC---TTCHHHHHHHHHHCS---------SCEEECTTCCSHHHHHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEECCCC---cccHHHHHHHHHhcC---------CCEEeCCCcCCHHHHHHHHHc---C
Confidence 4578999999999999999999997443 456777888777532 243333222345677666553 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+ +.++-.-+..+++++..|++.|+. +..+.
T Consensus 293 a~d~v~i-------------k~~~~GGit~~~~i~~~A~~~gi~-~~~h~ 328 (390)
T 3ugv_A 293 ACDLVMP-------------DFMRIGGVSGWMRAAGVAGAWGIP-MSTHL 328 (390)
T ss_dssp CCSEECC-------------BHHHHTHHHHHHHHHHHHHHHTCC-BCCBS
T ss_pred CCCEEEe-------------CccccCCHHHHHHHHHHHHHcCCE-EeecC
Confidence 3455432 111223467788899999999986 55443
No 455
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=72.73 E-value=14 Score=37.23 Aligned_cols=98 Identities=14% Similarity=0.071 Sum_probs=63.5
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++-+++++.|++.|++.||. |. .+++..+.+.+... +|.+.+=.-.+..+++..++. .
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~--P~---~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---~ 284 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEI--DS---YSPQGLAYVRNHSP---------HPISSCETLFGIREFKPFFDA---N 284 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEEC--CC---SCHHHHHHHHHTCS---------SCEEECTTCCHHHHHHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEe--Cc---CCHHHHHHHHhhCC---------CCEEeCCCcCCHHHHHHHHHh---C
Confidence 3578999999999999999999995 53 36677777776431 243332111234556555543 3
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+=+ ++ .-+..+++++..|++.|+. +...+
T Consensus 285 ~~d~v~~k~-------------~~-GGit~~~~ia~~A~~~gi~-~~~h~ 319 (409)
T 3go2_A 285 AVDVAIVDT-------------IW-NGVWQSMKIAAFADAHDIN-VAPHN 319 (409)
T ss_dssp CCSEEEECH-------------HH-HCHHHHHHHHHHHHHTTCE-EEECC
T ss_pred CCCEEEeCC-------------CC-CCHHHHHHHHHHHHHcCCE-EeecC
Confidence 456655411 22 3467778899999999985 66543
No 456
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=72.54 E-value=14 Score=34.10 Aligned_cols=70 Identities=11% Similarity=0.045 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCcEEeccCcccccC-HHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEe
Q 013498 236 LYEILGEVIKVGATTLNIPDTVGITM-PTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G~~~-P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
..++++.+.++|++.|.+.|..+... .....++++.+++.++ +||.+|.--.. ...+..++++||+.|..
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~----ipvi~~ggI~~---~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID----IPFTVGGGIHD---FETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC----SCEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC----CCEEEeCCCCC---HHHHHHHHHcCCCEEEE
Confidence 44667888888999998888765532 2234567777877652 66777644321 24566777889988744
No 457
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=72.53 E-value=36 Score=33.84 Aligned_cols=65 Identities=20% Similarity=0.231 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEE-eccCccccc-CHHHHHHH
Q 013498 204 EIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTL-NIPDTVGIT-MPTEFGKL 268 (442)
Q Consensus 204 ~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I-~laDT~G~~-~P~~v~~l 268 (442)
+.+.+.++.|.+.|.+.+.+.+..-.+.+.+.+.+..+.+.++..=.+ +++-.+|.- .|+.+.+|
T Consensus 141 ~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~PiilYNiP~rTg~~ls~e~l~~L 207 (360)
T 4dpp_A 141 REAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGPTIIYNVPGRTGQDIPPRAIFKL 207 (360)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCCcccCCCCCHHHHHHH
Confidence 455677888899998766665556667788888898888887643222 233455664 44433433
No 458
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=72.47 E-value=24 Score=35.26 Aligned_cols=100 Identities=15% Similarity=0.157 Sum_probs=67.5
Q ss_pred CCCCHHHHHHHHHHHhHcCC--CEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHH
Q 013498 96 ATLTSKEKLDIARQLAKLGV--DIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 173 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV--~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~ 173 (442)
-.++.++-+++++.|++.|+ ..||=-+| +++++.++.+.+..+ +| | +=.-.+..+++..++.
T Consensus 196 ~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~---~~d~~~~~~l~~~~~---------iP-I-dE~~~~~~~~~~~~~~-- 259 (391)
T 3gd6_A 196 HLLNWKDAHRAIKRLTKYDLGLEMIESPAP---RNDFDGLYQLRLKTD---------YP-I-SEHVWSFKQQQEMIKK-- 259 (391)
T ss_dssp TCSCHHHHHHHHHHHTTCCSSCCEEECCSC---TTCHHHHHHHHHHCS---------SC-E-EEECCCHHHHHHHHHH--
T ss_pred CCcCHHHHHHHHHHHHhcCCCcceecCCCC---hhhHHHHHHHHHHcC---------CC-c-CCCCCCHHHHHHHHHc--
Confidence 34789999999999999999 99996433 457788888877632 23 2 3233466777777664
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|.+=. + +. .-+..+.+++..|+++|+. +..+.+
T Consensus 260 -~~~d~v~~k~--~------~~-----GGit~~~~ia~~A~~~gi~-~~~~~~ 297 (391)
T 3gd6_A 260 -DAIDIFNISP--V------FI-----GGLTSAKKAAYAAEVASKD-VVLGTT 297 (391)
T ss_dssp -TCCSEEEECH--H------HH-----TSHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred -CCCCEEEECc--h------hc-----CCHHHHHHHHHHHHHcCCE-EEecCC
Confidence 2456655411 1 11 2256678899999999985 777653
No 459
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=72.44 E-value=79 Score=31.28 Aligned_cols=165 Identities=16% Similarity=0.150 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
+.++..+-++.+.+.|++.|++-.......+.+.++.+++.++... ...+-+....+.++....++.+...++.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avR~a~g~d~------~l~vDan~~~~~~~a~~~~~~l~~~~i~ 218 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMVAEVRRAVGDDV------DLFIDINGAWTYDQALTTIRALEKYNLS 218 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHHHHHHHHHCTTS------CEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHHHHHHHhhCCCC------EEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 5677777888888899999998322222346788888888765421 1122222233445544455666667777
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcEEeccCcc
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATTLNIPDTV 257 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~I~laDT~ 257 (442)
.|.-.++..+ ++ .+.+..+..++. |.. |.+-.+++.+.++ .+.| +|.|.+ |..
T Consensus 219 ~iEqP~~~~~--------------~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~~~----i~~~~~d~v~i-k~~ 272 (397)
T 2qde_A 219 KIEQPLPAWD--------------LD---GMARLRGKVATP-IYA---DESAQELHDLLAI----INKGAADGLMI-KTQ 272 (397)
T ss_dssp CEECCSCTTC--------------HH---HHHHHHTTCSSC-EEE---STTCCSHHHHHHH----HHHTCCSEEEE-CHH
T ss_pred EEECCCChhh--------------HH---HHHHHHhhCCCC-EEE---eCCcCCHHHHHHH----HHcCCCCEEEE-ecc
Confidence 6653222211 11 122222334444 443 3344455544333 3444 677666 444
Q ss_pred cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 258 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 258 G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
=+.-..+..++....++. ++++.+|+--..|++++-++
T Consensus 273 ~~GGit~~~~i~~~A~~~-----g~~~~~~~~~es~ig~aa~~ 310 (397)
T 2qde_A 273 KAGGLLKAQRWLTLARLA-----NLPVICGCMVGSGLEASPAA 310 (397)
T ss_dssp HHTSHHHHHHHHHHHHHH-----TCCEEECCCSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHc-----CCeEEEecCcccHHHHHHHH
Confidence 444455666666666654 26688887666666655433
No 460
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=72.30 E-value=58 Score=31.24 Aligned_cols=107 Identities=16% Similarity=0.126 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHcCCC--eEEEccCCCCCCCHHHHHHHHHHHHHcC---CcEEeccCcccccCHHHHHHHHHHHHH
Q 013498 200 QQVVEIARSMVKFARSLGCD--DVEFSPEDAGRSDRKFLYEILGEVIKVG---ATTLNIPDTVGITMPTEFGKLIADIKA 274 (442)
Q Consensus 200 ~e~l~~~~~~v~~ar~~G~~--~V~f~~edasr~d~~~l~~~~~~~~~~G---ad~I~laDT~G~~~P~~v~~li~~l~~ 274 (442)
+..++.+.+.++.|..+|+. .+.|-+-.......+-+.++++.+.+ . ..+|.|--+.|..+++++.++++.+.
T Consensus 138 e~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~~~~e~~~~r~~e~l~~-~~~a~~~l~lEn~~~~~t~~el~~l~~~~~- 215 (301)
T 2j6v_A 138 ERSLAELRYSARLLSLLGAEDGVLVLHLGGAYGEKGKALRRFVENLRG-EEEVLRYLALENDERLWNVEEVLKAAEALG- 215 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEECCCCTTCHHHHHHHHHHHHTT-CHHHHHHEEEECCSSSCCHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEECCCcCCCCHHHHHHHHHHHHhH-HHhhcceEEEEeCCCCCCHHHHHHHHhcCC-
Confidence 45567778888888888854 45554421111112233333333332 1 12788888888888888888887763
Q ss_pred hCCCCcceeEEEeecCCc--chHHHHHHHHHHh---CCCEEEec
Q 013498 275 NTPGIENVVISTHCQNDL--GLSTANTIAGACA---GARQVEVT 313 (442)
Q Consensus 275 ~~p~~~~v~i~~H~HNDl--GLA~ANalaAl~a---Ga~~vd~T 313 (442)
++ +-+.+|.|+-- +..+.+.+..+.. ....|+.+
T Consensus 216 -vg----vclDtH~~~~g~~~~~~~~~~~~~~~~~~~~~hiHls 254 (301)
T 2j6v_A 216 -VP----VVVDTLHHALNPGRLPLEEALRLAFPTWRGRPKVHLA 254 (301)
T ss_dssp -CC----EEEEHHHHHHSCTTCCHHHHHHHHGGGCSSCCEEEEC
T ss_pred -CE----EEEeHHHHhcCCCCCChHHHHHHHHHHHhhCCEEEEC
Confidence 43 67777666532 3445555555433 23556654
No 461
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=72.28 E-value=6.6 Score=38.70 Aligned_cols=72 Identities=17% Similarity=0.091 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCcEEeccCccc-ccCHHHHHHHH----HHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 236 LYEILGEVIKVGATTLNIPDTVG-ITMPTEFGKLI----ADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~G-~~~P~~v~~li----~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+.+.++...++|++.|.+.|+.| .+.|..+.+++ +.+.+.++.. ++++-.||..+ +. ....+ .+.|++.+
T Consensus 195 ~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~-g~~~i~~~~G~-~~-~l~~l--~~~g~d~~ 269 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE-NVPLIMFGVGA-SH-LAGDW--HDLPLDVV 269 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG-CSCEEEECTTC-GG-GHHHH--HTSSCSEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc-CCcEEEEcCCc-HH-HHHHH--HHhCCCEE
Confidence 44455566778999999999765 66787765543 2222222211 26678888776 32 22223 26899988
Q ss_pred Ee
Q 013498 311 EV 312 (442)
Q Consensus 311 d~ 312 (442)
+.
T Consensus 270 ~~ 271 (359)
T 2inf_A 270 GL 271 (359)
T ss_dssp EC
T ss_pred Ee
Confidence 65
No 462
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=72.11 E-value=12 Score=37.59 Aligned_cols=105 Identities=9% Similarity=-0.006 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+..++.++ +++++.|.+.|+..||=-.| ++|++..+.+++. .-+|...+=.-.+..|++..++.
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~~~~--- 276 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHEQPLH---YEALLDLKELGER---------IETPICLDESLISSRVAEFVAKL--- 276 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEESCSC---TTCHHHHHHHHHH---------SSSCEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEeCCCC---hhhHHHHHHHHhh---------CCCCEEEeCCcCCHHHHHHHHhc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++-.-+..++++++.|++.|+. +..+.+..+
T Consensus 277 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es 317 (400)
T 3mwc_A 277 GISNIWNI-------------KIQRVGGLLEAIKIYKIATDNGIK-LWGGTMPES 317 (400)
T ss_dssp TCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHTTCE-EEECCSCCC
T ss_pred CCCCEEEE-------------cchhhCCHHHHHHHHHHHHHcCCE-EEecCCCCC
No 463
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=72.06 E-value=21 Score=33.92 Aligned_cols=133 Identities=23% Similarity=0.279 Sum_probs=72.3
Q ss_pred chhhHHHHHHHHHh-CCCCEEEEeecCChH-HHHHHhCCCHHHHHHHHHHHHHHHHHc-CCCeEEE--ccCCCCCCCHHH
Q 013498 161 NERDIKTAWEAVKY-AKRPRIHTFIATSGI-HMEHKLRKTKQQVVEIARSMVKFARSL-GCDDVEF--SPEDAGRSDRKF 235 (442)
Q Consensus 161 ~~~dI~~a~e~l~~-~g~~~v~i~~~~Sd~-h~~~~l~~s~~e~l~~~~~~v~~ar~~-G~~~V~f--~~edasr~d~~~ 235 (442)
..++...+.+.+.+ +|++.|.+.+..... +-...++.+. +.+.+.++.+++. +.. |.+ .+ +. . .
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~----~~~~eii~~v~~~~~~p-v~vk~~~-~~--~---~ 177 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDP----EVAAALVKACKAVSKVP-LYVKLSP-NV--T---D 177 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCH----HHHHHHHHHHHHHCSSC-EEEEECS-CS--S---C
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCH----HHHHHHHHHHHHhcCCC-EEEEECC-Ch--H---H
Confidence 35566666666665 688877654432111 0001122232 2334555555555 654 433 32 11 1 2
Q ss_pred HHHHHHHHHHcCCcEEeccCcc-------------------cccCHH---HHHHHHHHHHHhCCCCcceeEEEeecCCcc
Q 013498 236 LYEILGEVIKVGATTLNIPDTV-------------------GITMPT---EFGKLIADIKANTPGIENVVISTHCQNDLG 293 (442)
Q Consensus 236 l~~~~~~~~~~Gad~I~laDT~-------------------G~~~P~---~v~~li~~l~~~~p~~~~v~i~~H~HNDlG 293 (442)
+.++++.+.++|+|.|.+.++. |..-|. ...++++.+++.+. ++|-. .-|
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~----ipvia----~GG 249 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVD----IPIIG----MGG 249 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCS----SCEEE----CSS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcC----CCEEE----ECC
Confidence 4467788889999999997632 111121 23477888887652 44443 233
Q ss_pred h-HHHHHHHHHHhCCCEEEe
Q 013498 294 L-STANTIAGACAGARQVEV 312 (442)
Q Consensus 294 L-A~ANalaAl~aGa~~vd~ 312 (442)
. -..++.+++++||+.|-.
T Consensus 250 I~~~~d~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 250 VANAQDVLEMYMAGASAVAV 269 (311)
T ss_dssp CCSHHHHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHHcCCCEEEE
Confidence 3 245777888899998743
No 464
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=71.96 E-value=60 Score=30.00 Aligned_cols=122 Identities=11% Similarity=0.110 Sum_probs=70.0
Q ss_pred HHHHHHHhHcCCCEEEEcc----CCCCh-hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCC
Q 013498 104 LDIARQLAKLGVDIIEAGF----PAASK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRP 178 (442)
Q Consensus 104 l~ia~~L~~~GV~~IEvG~----p~~~~-~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~ 178 (442)
.+-++.|...|+|.|=.+. ...++ .+....+.|.+..+ +|.+. . .+...++++..|..
T Consensus 56 ~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~---------iPv~~-~-------~~A~~~al~~~g~~ 118 (240)
T 3ixl_A 56 VDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATG---------LPCTT-M-------STAVLNGLRALGVR 118 (240)
T ss_dssp HHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHS---------SCEEE-H-------HHHHHHHHHHTTCS
T ss_pred HHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccC---------CCEEC-H-------HHHHHHHHHHhCCC
Confidence 4457888899999998862 11222 23455566665432 24332 1 12334445556888
Q ss_pred EEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC---C---CCCCCHHHHHHHHHH-H-HHcCCcE
Q 013498 179 RIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE---D---AGRSDRKFLYEILGE-V-IKVGATT 250 (442)
Q Consensus 179 ~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e---d---asr~d~~~l~~~~~~-~-~~~Gad~ 250 (442)
+|.+..+-.. +......++.++.|++.+..... + .++.+++.+.++++. + ...|+|.
T Consensus 119 rvglltpy~~---------------~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ada 183 (240)
T 3ixl_A 119 RVALATAYID---------------DVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDG 183 (240)
T ss_dssp EEEEEESSCH---------------HHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSE
T ss_pred EEEEEeCChH---------------HHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCE
Confidence 9998765221 11224456677789863333221 1 235667777777777 5 4557888
Q ss_pred EeccCcc
Q 013498 251 LNIPDTV 257 (442)
Q Consensus 251 I~laDT~ 257 (442)
|.|.-|.
T Consensus 184 ivL~CT~ 190 (240)
T 3ixl_A 184 ILLSSGG 190 (240)
T ss_dssp EEEECTT
T ss_pred EEEeCCC
Confidence 7777554
No 465
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=71.96 E-value=11 Score=37.23 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.++.++ +++++.|.+.|+..||=-+| ++|++..+.+.+..+ +|...+=.-.+..+++..++. ..
T Consensus 192 ~~~~~~-~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------ipIa~dE~~~~~~~~~~~i~~---~~ 255 (369)
T 2zc8_A 192 AYSLAN-LAQLKRLDELRLDYIEQPLA---YDDLLDHAKLQRELS---------TPICLDESLTGAEKARKAIEL---GA 255 (369)
T ss_dssp CCCGGG-HHHHHGGGGGCCSCEECCSC---TTCSHHHHHHHHHCS---------SCEEESTTCCSHHHHHHHHHH---TC
T ss_pred CCCHHH-HHHHHHHHhCCCcEEECCCC---cccHHHHHHHHhhCC---------CCEEEcCccCCHHHHHHHHHh---CC
Confidence 367788 99999999999999996443 456777777776532 232222111356677776654 23
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
++.|.+= .+ +. .-+..+.++++.|+++|+. +.++.
T Consensus 256 ~d~v~ik--~~------~~-----GGit~~~~i~~~A~~~g~~-~~~~~ 290 (369)
T 2zc8_A 256 GRVFNVK--PA------RL-----GGHGESLRVHALAESAGIP-LWMGG 290 (369)
T ss_dssp CSEEEEC--HH------HH-----TSHHHHHHHHHHHHHTTCC-EEECC
T ss_pred CCEEEEc--hh------hh-----CCHHHHHHHHHHHHHcCCc-EEecC
Confidence 5655541 11 11 1256678899999999996 55554
No 466
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=71.96 E-value=40 Score=30.81 Aligned_cols=95 Identities=13% Similarity=0.057 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEecc------Cccccc-------------CHHHHHHHHHHHHHhCCCCcceeEEEeec-CC
Q 013498 232 DRKFLYEILGEVIKVGATTLNIP------DTVGIT-------------MPTEFGKLIADIKANTPGIENVVISTHCQ-ND 291 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~la------DT~G~~-------------~P~~v~~li~~l~~~~p~~~~v~i~~H~H-ND 291 (442)
+.+.+.+.++.+.+. +|+|-+. |.-|.. +.....++++.+++.+. +++.+=.- |.
T Consensus 17 ~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~----~pv~~~~~~~~ 91 (248)
T 1geq_A 17 DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS----TPIVLMTYYNP 91 (248)
T ss_dssp CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC----CCEEEEECHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC----CCEEEEeccch
Confidence 335666666666666 7766665 554543 44667889999998762 34333110 00
Q ss_pred -cchH-HHHHHHHHHhCCCEEEecccccccccCcccHHHHHHHHHhcc
Q 013498 292 -LGLS-TANTIAGACAGARQVEVTINGIGERAGNASLEEVVMAFKCRG 337 (442)
Q Consensus 292 -lGLA-~ANalaAl~aGa~~vd~Tv~GlGeraGNa~lEevv~~L~~~g 337 (442)
+-.+ ..-.-.++++||+.|..--... ...++++..++..|
T Consensus 92 ~~~~~~~~~~~~~~~~Gad~v~~~~~~~------~~~~~~~~~~~~~g 133 (248)
T 1geq_A 92 IYRAGVRNFLAEAKASGVDGILVVDLPV------FHAKEFTEIAREEG 133 (248)
T ss_dssp HHHHCHHHHHHHHHHHTCCEEEETTCCG------GGHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHCCCCEEEECCCCh------hhHHHHHHHHHHhC
Confidence 0000 1344577889999997753322 23556666666554
No 467
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=71.90 E-value=11 Score=37.74 Aligned_cols=101 Identities=9% Similarity=0.047 Sum_probs=65.3
Q ss_pred CCC-CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 96 ATL-TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 96 ~~f-s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
-.+ +.++-+++++.|.+.|++.||--+| +++++..+.+++... +|.+.+=.-.+..+++..++.
T Consensus 214 ~~~~~~~~A~~~~~~L~~~~i~~iEeP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~l~~--- 278 (394)
T 3mkc_A 214 YRFTDWYEVARLLNSIEDLELYFAEATLQ---HDDLSGHAKLVENTR---------SRICGAEMSTTRFEAEEWITK--- 278 (394)
T ss_dssp TCCCCHHHHHHHHHHTGGGCCSEEESCSC---TTCHHHHHHHHHHCS---------SCBEECTTCCHHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHhhhcCCeEEECCCC---chhHHHHHHHHhhCC---------CCEEeCCCCCCHHHHHHHHHc---
Confidence 357 8999999999999999999997443 456777888777532 243332222245566655543
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..++.|.+ +.++-.-+..+++++..|+..|+. +...+
T Consensus 279 ~~~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 315 (394)
T 3mkc_A 279 GKVHLLQS-------------DYNRCGGLTELRRITEMATANNVQ-VMPHN 315 (394)
T ss_dssp TCCSEECC-------------CTTTTTHHHHHHHHHHHHHHTTCE-ECCCC
T ss_pred CCCCeEec-------------CccccCCHHHHHHHHHHHHHcCCE-EeecC
Confidence 24555543 112223466778899999999985 65544
No 468
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=71.90 E-value=15 Score=36.64 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+..++.++.+++++.|++.|+..||=-.| ++|++.++.+++. .-+|...+=.-.+..|+...++.
T Consensus 201 N~~~~~~~A~~~~~~l~~~~i~~iEeP~~---~~d~~~~~~l~~~---------~~ipIa~dE~~~~~~~~~~~~~~--- 265 (381)
T 3fcp_A 201 NQAWDAATGAKGCRELAAMGVDLIEQPVS---AHDNAALVRLSQQ---------IETAILADEAVATAYDGYQLAQQ--- 265 (381)
T ss_dssp TTCBCHHHHHHHHHHHHHTTCSEEECCBC---TTCHHHHHHHHHH---------SSSEEEESTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHhhcCccceeCCCC---cccHHHHHHHHHh---------CCCCEEECCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++-.-+..++++++.|++.|+. +..+.+..+
T Consensus 266 ~a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~~~~~es 306 (381)
T 3fcp_A 266 GFTGAYAL-------------KIAKAGGPNSVLALARVAQAAGIG-LYGGTMLEG 306 (381)
T ss_dssp TCCSEEEE-------------CHHHHTSTTHHHHHHHHHHHHTCE-EEECCSCCC
T ss_pred CCCCEEEe-------------cccccCCHHHHHHHHHHHHHcCCc-eecCCCCcc
No 469
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=71.87 E-value=10 Score=38.30 Aligned_cols=101 Identities=16% Similarity=0.116 Sum_probs=65.7
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++-+++++.|.+.|++.||--.| +++++..+++.+... +|.+.+=.-.+..+++..++. .
T Consensus 229 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~l~~---~ 293 (418)
T 3r4e_A 229 HRYTPQEAANLGKMLEPYQLFWLEDCTP---AENQEAFRLVRQHTV---------TPLAVGEIFNTIWDAKDLIQN---Q 293 (418)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEESCSC---CSSGGGGHHHHHHCC---------SCEEECTTCCSGGGTHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEECCCC---ccCHHHHHHHHhcCC---------CCEEEcCCcCCHHHHHHHHHc---C
Confidence 3578999999999999999999997443 345666777766532 243332222356677766653 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+ +.++-.-+..+++++..|++.|+. +....
T Consensus 294 a~d~v~~-------------k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 329 (418)
T 3r4e_A 294 LIDYIRA-------------TVVGAGGLTHLRRIADLASLYQVR-TGCHG 329 (418)
T ss_dssp CCSEECC-------------CTTTTTHHHHHHHHHHHHHHTTCE-EEECC
T ss_pred CCCeEec-------------CccccCCHHHHHHHHHHHHHcCCE-EeecC
Confidence 3555543 112223466778899999999985 76655
No 470
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=71.83 E-value=17 Score=33.59 Aligned_cols=195 Identities=6% Similarity=-0.023 Sum_probs=103.2
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCC-Ch-hHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAA-SK-EDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~-~~-~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
|-.+-...+-+.+.+.|++.+-...... .+ .+.+.++.+.... ++ + .|. . ....+.+...++.+. .
T Consensus 19 ~~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---vd---g---iii-~-~~~~~~~~~~~~~~~-~ 86 (304)
T 3o1i_D 19 YWLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWG---AN---A---IIL-G-TVDPHAYEHNLKSWV-G 86 (304)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHT---CS---E---EEE-C-CSSTTSSTTTHHHHT-T
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcC---CC---E---EEE-e-CCChhHHHHHHHHHc-C
Confidence 4456666777888889997665543321 22 3345666655531 11 1 121 1 122222222334444 5
Q ss_pred CCCEEEEeecCC-----hHHHHHHhCCCHHHHHHHHHHHHHHHHHcC-----CCeEEEc-cCCCCCCCHHHHHHHHHHHH
Q 013498 176 KRPRIHTFIATS-----GIHMEHKLRKTKQQVVEIARSMVKFARSLG-----CDDVEFS-PEDAGRSDRKFLYEILGEVI 244 (442)
Q Consensus 176 g~~~v~i~~~~S-----d~h~~~~l~~s~~e~l~~~~~~v~~ar~~G-----~~~V~f~-~edasr~d~~~l~~~~~~~~ 244 (442)
|++.|.+-.... +.......+.+. .+....+++++.++| ...|.|- .........+.+.-+.+.+.
T Consensus 87 ~iPvV~~~~~~~~~~~~~~~~~~~V~~D~---~~~g~~a~~~l~~~g~~~~~~~~i~~i~~~~~~~~~~~R~~gf~~~l~ 163 (304)
T 3o1i_D 87 NTPVFATVNQLDLDEEQSTLLKGEVGVDW---YWMGYEAGKYLAERHPKGSGKTNIALLLGPRTRGGTKPVTTGFYEAIK 163 (304)
T ss_dssp TSCEEECSSCCCCCTTTGGGEEEECCCCH---HHHHHHHHHHHHTTSBTTTCCEEEEEECCCC-----CHHHHHHHHTTT
T ss_pred CCCEEEecCCCcccccCCCceEEEEecCH---HHHHHHHHHHHHHhcccCCCCCEEEEEECCCCcchHHHHHHHHHHHHh
Confidence 888776522221 100001123332 345567788888888 6555543 22222233345556666666
Q ss_pred HcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEeccccc
Q 013498 245 KVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGI 317 (442)
Q Consensus 245 ~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~Gl 317 (442)
+.|...... -.+-..++..++.+..+. ..|++ .. + |.|| .+|+.-.-+.-++|.+ =|.+|.|+
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~~~~~~~~l-~~~~~---~a-i-~~~d-~~a~g~~~al~~~g~~-~di~vvg~ 226 (304)
T 3o1i_D 164 NSDIHIVDS--FWADNDKELQRNLVQRVI-DMGNI---DY-I-VGSA-VAIEAAISELRSADKT-HDIGLVSV 226 (304)
T ss_dssp TBTEEEEEC--CCCCSCHHHHHHHHHHHH-HHSCC---SE-E-EECH-HHHHHHHHHHTTTTCG-GGSEEBCS
T ss_pred cCCCEEEEe--ecCCCcHHHHHHHHHHHH-cCCCC---CE-E-EecC-cchHHHHHHHHhcCCC-CCeEEEEe
Confidence 667654432 255668888888887776 55543 34 4 5566 5666666666677876 46777776
No 471
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=71.70 E-value=5 Score=39.06 Aligned_cols=82 Identities=20% Similarity=0.218 Sum_probs=44.5
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEeccC-cc-----cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIPD-TV-----GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~laD-T~-----G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
|.+++ +.+.+.+.++...+.|||.|-+.= ++ .+-..+++.+++..++..... +++|++=+=+ ..-+
T Consensus 44 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT~~-----~~Va 116 (294)
T 2dqw_A 44 DGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDTRK-----PEVA 116 (294)
T ss_dssp ---------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEECSC-----HHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEECCC-----HHHH
Confidence 45554 667778888888888998876642 21 223345555555544432211 3678875544 3455
Q ss_pred HHHHHhCCCEEEeccc
Q 013498 300 IAGACAGARQVEVTIN 315 (442)
Q Consensus 300 laAl~aGa~~vd~Tv~ 315 (442)
.+|+++|++.|+-.-+
T Consensus 117 ~aAl~aGa~iINdVsg 132 (294)
T 2dqw_A 117 EEALKLGAHLLNDVTG 132 (294)
T ss_dssp HHHHHHTCSEEECSSC
T ss_pred HHHHHhCCCEEEECCC
Confidence 6889999999975443
No 472
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=71.68 E-value=59 Score=29.82 Aligned_cols=75 Identities=7% Similarity=0.037 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC--CCC-------HHHHHHHHHHHHHcCCcEEeccCccc--ccCHHHHH
Q 013498 198 TKQQVVEIARSMVKFARSLGCDDVEFSPEDAG--RSD-------RKFLYEILGEVIKVGATTLNIPDTVG--ITMPTEFG 266 (442)
Q Consensus 198 s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas--r~d-------~~~l~~~~~~~~~~Gad~I~laDT~G--~~~P~~v~ 266 (442)
.+++.++.+.+.++.|+.+|.+.|.+.+-... ..+ .+.+.++++.+.+.|+. +.+-..-+ ..+|.++.
T Consensus 78 ~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~ 156 (286)
T 3dx5_A 78 DFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTL 156 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHH
Confidence 46778899999999999999986665432111 112 24455566666677874 33333333 24678877
Q ss_pred HHHHHHH
Q 013498 267 KLIADIK 273 (442)
Q Consensus 267 ~li~~l~ 273 (442)
++++.+.
T Consensus 157 ~l~~~~~ 163 (286)
T 3dx5_A 157 ELLGEVD 163 (286)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 7777664
No 473
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=71.67 E-value=48 Score=30.04 Aligned_cols=198 Identities=12% Similarity=0.042 Sum_probs=100.9
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChh-HHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
.|-.+-...+-+.+.+.|++.+-.... ..++ +.+.++.+.. ..++ + +.... ...+.+...++.+...
T Consensus 14 ~f~~~~~~gi~~~~~~~g~~~~~~~~~-~~~~~~~~~i~~l~~---~~vd---g----iIi~~-~~~~~~~~~~~~~~~~ 81 (271)
T 2dri_A 14 PFFVSLKDGAQKEADKLGYNLVVLDSQ-NNPAKELANVQDLTV---RGTK---I----LLINP-TDSDAVGNAVKMANQA 81 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEECT-TCHHHHHHHHHHHTT---TTEE---E----EEECC-SSTTTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEeCCC-CCHHHHHHHHHHHHH---cCCC---E----EEEeC-CChHHHHHHHHHHHHC
Confidence 355566677778888899877654321 2222 2233443322 1111 1 21111 1222222233444456
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCeEEE-ccCCCCCCCHHHHHHHHHHHHHcCCcEEe
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLG--CDDVEF-SPEDAGRSDRKFLYEILGEVIKVGATTLN 252 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G--~~~V~f-~~edasr~d~~~l~~~~~~~~~~Gad~I~ 252 (442)
|++.|.+--...+.......+.+. .+....++++..++| ...+.| +.........+.+.-+.+.+.+.|.....
T Consensus 82 ~iPvV~i~~~~~~~~~~~~V~~D~---~~~g~~a~~~L~~~g~g~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~~~~~ 158 (271)
T 2dri_A 82 NIPVITLDRQATKGEVVSHIASDN---VLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLA 158 (271)
T ss_dssp TCCEEEESSCCSSSCCSEEEEECH---HHHHHHHHHHHHHHHCTTCEEEEEECCTTCHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEecCCCCCCceeEEEecCh---HHHHHHHHHHHHHHcCCCCeEEEEECCCCCccHhHHHHHHHHHHhcCCCEEEE
Confidence 888775532211100000122232 244556677777773 334554 32222222345566667777778876443
Q ss_pred ccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 253 IPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 253 laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
. ..|-..++..++.+..+.+..|++ =.+=|.||. +|+.-.-++-+.|.+ |.+|.|+.
T Consensus 159 ~--~~~~~~~~~~~~~~~~ll~~~~~~----~ai~~~nD~-~A~g~~~al~~~g~~--dv~vvGfD 215 (271)
T 2dri_A 159 S--QPADFDRIKGLNVMQNLLTAHPDV----QAVFAQNDE-MALGALRALQTAGKS--DVMVVGFD 215 (271)
T ss_dssp E--EECTTCHHHHHHHHHHHHHHCTTC----CEEEESSHH-HHHHHHHHHHHHTCC--SCEEEEEE
T ss_pred e--cCCCCCHHHHHHHHHHHHHhCCCc----cEEEECCCc-HHHHHHHHHHHcCCC--CcEEEEec
Confidence 2 134567788888887776655542 256688875 455444455567874 78888876
No 474
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=71.67 E-value=9.6 Score=38.20 Aligned_cols=98 Identities=11% Similarity=0.159 Sum_probs=63.0
Q ss_pred CCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 97 TLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 97 ~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
.++.++-+++++.|.+.|++.||-.+| +++++..+.+.+... +|.+.+=.-.+.++++..++. ..
T Consensus 230 ~~~~~~ai~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---~~ 294 (398)
T 2pp0_A 230 QWDRETAIRMGRKMEQFNLIWIEEPLD---AYDIEGHAQLAAALD---------TPIATGEMLTSFREHEQLILG---NA 294 (398)
T ss_dssp CSCHHHHHHHHHHHGGGTCSCEECCSC---TTCHHHHHHHHHHCS---------SCEEECTTCCSHHHHHHHHHT---TC
T ss_pred CCCHHHHHHHHHHHHHcCCceeeCCCC---hhhHHHHHHHHhhCC---------CCEEecCCcCCHHHHHHHHHc---CC
Confidence 468999999999999999999997544 467788888877532 232222111245666666553 23
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF 223 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f 223 (442)
++.|.+ ..+ +. .-+..+.++++.|+++|+. +..
T Consensus 295 ~d~v~i--k~~------~~-----GGite~~~i~~~A~~~gi~-~~~ 327 (398)
T 2pp0_A 295 SDFVQP--DAP------RV-----GGISPFLKIMDLAAKHGRK-LAP 327 (398)
T ss_dssp CSEECC--CHH------HH-----TSHHHHHHHHHHHHHTTCE-ECC
T ss_pred CCEEEe--Ccc------cc-----CCHHHHHHHHHHHHHcCCe-Eee
Confidence 455432 110 11 1266778899999999985 543
No 475
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=71.57 E-value=18 Score=34.61 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=48.5
Q ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEecc------CcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 227 DAGRS-DRKFLYEILGEVIKVGATTLNIP------DTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 227 dasr~-d~~~l~~~~~~~~~~Gad~I~la------DT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
|.++. +.+...+-++.+.+.|||.|-+. ...-+..-+++.+++..++.... .+++|++=+-+ - .-+
T Consensus 22 DGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT~~---~--~Va 94 (270)
T 4hb7_A 22 DGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDTFR---S--EVA 94 (270)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEECSC---H--HHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEECCC---H--HHH
Confidence 45543 55677777777888888877662 11122333556666655544321 14788885533 3 345
Q ss_pred HHHHHhCCCEEEeccccc
Q 013498 300 IAGACAGARQVEVTINGI 317 (442)
Q Consensus 300 laAl~aGa~~vd~Tv~Gl 317 (442)
.+|+++||++|+=--+|.
T Consensus 95 ~~al~aGa~iINDVs~g~ 112 (270)
T 4hb7_A 95 EACLKLGVDMINDQWAGL 112 (270)
T ss_dssp HHHHHHTCCEEEETTTTS
T ss_pred HHHHHhccceeccccccc
Confidence 789999999997544443
No 476
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=71.51 E-value=65 Score=29.88 Aligned_cols=199 Identities=10% Similarity=0.009 Sum_probs=99.3
Q ss_pred CCHHHHHHHHHHHhHcCCCEEEEccCCCChh-HHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCC
Q 013498 98 LTSKEKLDIARQLAKLGVDIIEAGFPAASKE-DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAK 176 (442)
Q Consensus 98 fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~-d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g 176 (442)
|-.+....+-+.+.+.|++.+-.......++ +.+.++.+... .++ .|.... ...+.+...++.+...|
T Consensus 14 ~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~---~vd-------giIi~~-~~~~~~~~~~~~~~~~~ 82 (313)
T 2h3h_A 14 YWSQVEQGVKAAGKALGVDTKFFVPQKEDINAQLQMLESFIAE---GVN-------GIAIAP-SDPTAVIPTIKKALEMG 82 (313)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEECCSSSCHHHHHHHHHHHHHT---TCS-------EEEECC-SSTTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHc---CCC-------EEEEeC-CChHHHHHHHHHHHHCC
Confidence 4445566677778888987654421122222 23455555432 111 122111 12233333344444568
Q ss_pred CCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCCeEEEccCC-CCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 177 RPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSL--GCDDVEFSPED-AGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 177 ~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~--G~~~V~f~~ed-asr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
++.|.+-....+.......+.+.. +....+++++.++ |...|.|-... ......+.+.-+.+.+.+.|...+..
T Consensus 83 iPvV~~~~~~~~~~~~~~V~~d~~---~~g~~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~ 159 (313)
T 2h3h_A 83 IPVVTLDTDSPDSGRYVYIGTDNY---QAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIKDSEIEIVDI 159 (313)
T ss_dssp CCEEEESSCCTTSCCSCEEECCHH---HHHHHHHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHTTSSCEEEEE
T ss_pred CeEEEeCCCCCCcceeEEECcCHH---HHHHHHHHHHHHHcCCCCEEEEEECCCCCccHHHHHHHHHHHhcCCCCEEEEe
Confidence 887765322211000001223322 3445667777777 77666553211 12222345555566666677764432
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEEEecccccc
Q 013498 254 PDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQVEVTINGIG 318 (442)
Q Consensus 254 aDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~vd~Tv~GlG 318 (442)
. .+-..+...++.+..+.+..|++. .+=|.||. +|+.-.-++-++|.. =|.+|.|++
T Consensus 160 ~--~~~~~~~~~~~~~~~~l~~~~~~~----ai~~~~d~-~a~g~~~al~~~G~p-~dv~vvg~d 216 (313)
T 2h3h_A 160 L--NDEEDGARAVSLAEAALNAHPDLD----AFFGVYAY-NGPAQALVVKNAGKV-GKVKIVCFD 216 (313)
T ss_dssp E--ECSSCHHHHHHHHHHHHHHCTTCC----EEEECSTT-HHHHHHHHHHHTTCT-TTSEEEEEC
T ss_pred e--cCCCCHHHHHHHHHHHHHHCcCce----EEEEcCCC-ccHHHHHHHHHcCCC-CCeEEEEeC
Confidence 1 244577888888887777666432 34477765 555544445567731 156777765
No 477
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=71.26 E-value=13 Score=37.94 Aligned_cols=102 Identities=9% Similarity=0.120 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++.+++++.|++.|+..||--.| +++++.++.+++. .-+|.+.+=.-.+..+++..++.
T Consensus 211 n~~~t~~~A~~~~~~Le~~~i~~iEeP~~---~~~~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~l~~--- 275 (433)
T 3rcy_A 211 HGQFTTAGAIRLGQAIEPYSPLWYEEPVP---PDNVGAMAQVARA---------VRIPVATGERLTTKAEFAPVLRE--- 275 (433)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSEEECCSC---TTCHHHHHHHHHH---------SSSCEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHhhhcCCCEEECCCC---hhhHHHHHHHHhc---------cCCCEEecCCCCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..++.|. .+.++-.-+..+++++..|+..|+. +...+
T Consensus 276 g~~D~v~-------------~d~~~~GGit~~~kia~lA~~~gv~-~~~h~ 312 (433)
T 3rcy_A 276 GAAAILQ-------------PALGRAGGIWEMKKVAAMAEVYNAQ-MAPHL 312 (433)
T ss_dssp TCCSEEC-------------CCHHHHTHHHHHHHHHHHHHTTTCE-ECCCC
T ss_pred CCCCEEE-------------eCchhcCCHHHHHHHHHHHHHcCCE-EEecC
No 478
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=71.24 E-value=12 Score=37.47 Aligned_cols=103 Identities=12% Similarity=0.102 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+..++.++-+++++.|++.|++.||--+|. ++++..+++.+. .-+|.+.+=.-.+..+++..++.
T Consensus 223 n~~~~~~~a~~~~~~l~~~~i~~iE~P~~~---~~~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 287 (407)
T 2o56_A 223 HAFTDTTSAIQFGRMIEELGIFYYEEPVMP---LNPAQMKQVADK---------VNIPLAAGERIYWRWGYRPFLEN--- 287 (407)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSCEECSSCS---SSHHHHHHHHHH---------CCSCEEECTTCCHHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEeCCCCh---hhHHHHHHHHHh---------CCCCEEeCCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|. ++..+-.-+..+++++++|++.|+. +..+..
T Consensus 288 ~~~d~v~-------------ik~~~~GGite~~~i~~~A~~~g~~-~~~h~~ 325 (407)
T 2o56_A 288 GSLSVIQ-------------PDICTCGGITEVKKICDMAHVYDKT-VQIHVC 325 (407)
T ss_dssp TCCSEEC-------------CCTTTTTHHHHHHHHHHHHHTTTCE-ECCCCC
T ss_pred CCCCEEe-------------cCccccCCHHHHHHHHHHHHHcCCe-EeecCC
No 479
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=71.24 E-value=43 Score=31.34 Aligned_cols=68 Identities=9% Similarity=-0.047 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
+++.+..+.+...-.+-..||+.- .|.. ...++|+.+++.+++. .+.+++--+ ..-....+..||+.|
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s-~G~~---~~~~~i~~i~~~~~~~-Pv~vGgGI~------t~e~a~~~~~gAd~V 207 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEY-SGVL---GDIEAVKKTKAVLETS-TLFYGGGIK------DAETAKQYAEHADVI 207 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTSC---CCHHHHHHHHHTCSSS-EEEEESSCC------SHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHhCcccCCCEEEEeC-CCcc---ChHHHHHHHHHhcCCC-CEEEEeccC------CHHHHHHHHhCCCEE
Confidence 455554444443322345565443 5652 2577888998876322 255664333 333344444488876
No 480
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=71.20 E-value=26 Score=32.54 Aligned_cols=112 Identities=10% Similarity=-0.014 Sum_probs=62.5
Q ss_pred hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc-------C-CCCCCC-
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP-------E-DAGRSD- 232 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~-------e-dasr~d- 232 (442)
..+++..++.++..|.+.|.+...... . ..+.++.+.+++.|+..+.+.. . +..-.+
T Consensus 40 ~~~~~~~l~~~~~~G~~~vEl~~~~~~-------~-------~~~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~d~ 105 (290)
T 2zvr_A 40 KGDLRKGMELAKRVGYQAVEIAVRDPS-------I-------VDWNEVKILSEELNLPICAIGTGQAYLADGLSLTHPND 105 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSCGG-------G-------SCHHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCSSH
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCCcc-------h-------hhHHHHHHHHHHcCCeEEEEeccCccccCCCCCCCCCH
Confidence 345666666667779998888754211 1 1123455667778886335544 1 111123
Q ss_pred ------HHHHHHHHHHHHHcCCcEEeccCcccc----cCHHHHHHHHHHHH---HhCCCCcceeEEEeecCC
Q 013498 233 ------RKFLYEILGEVIKVGATTLNIPDTVGI----TMPTEFGKLIADIK---ANTPGIENVVISTHCQND 291 (442)
Q Consensus 233 ------~~~l~~~~~~~~~~Gad~I~laDT~G~----~~P~~v~~li~~l~---~~~p~~~~v~i~~H~HND 291 (442)
.+.+.+.++.+.+.|++.|..+ ..|. ...+....+++.++ +.... +.|.+|.|++
T Consensus 106 ~~r~~~~~~~~~~i~~A~~lG~~~v~~~-~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~---v~l~lEn~~~ 173 (290)
T 2zvr_A 106 EIRKKAIERVVKHTEVAGMFGALVIIGL-VRGRREGRSYEETEELFIESMKRLLELTEH---AKFVIEPLNR 173 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESG-GGCCCTTSCHHHHHHHHHHHHHHHHHHCSS---CCEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEec-CCCCCCCcCHHHHHHHHHHHHHHHHHHhcc---CEEEEEeCCC
Confidence 2567788888888899888732 1233 22333344444444 33322 6788888763
No 481
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=71.12 E-value=19 Score=34.74 Aligned_cols=99 Identities=14% Similarity=0.083 Sum_probs=69.8
Q ss_pred HHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCc-EEeccCc-ccccCHHHHHHHHHHHHHhCCCCcceeE
Q 013498 207 RSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGAT-TLNIPDT-VGITMPTEFGKLIADIKANTPGIENVVI 284 (442)
Q Consensus 207 ~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad-~I~laDT-~G~~~P~~v~~li~~l~~~~p~~~~v~i 284 (442)
+++.+.|++.|+..-.|++ .+.+.+..+++.+.+.+.. .|.+.-. ...+-...+..++..+.+..+ +||
T Consensus 7 ~~ll~~A~~~~yAv~AfNv-----~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~----VPV 77 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAFNI-----HNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN----MPL 77 (286)
T ss_dssp HHHHHHHHHHTCCEEEEEC-----CSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT----SCB
T ss_pred HHHHHHHHHCCCEEEEEee-----CCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC----CcE
Confidence 5678889999986446776 4568999999999998865 4444432 223335667788888877763 778
Q ss_pred EEeecCCcchHHHHHHHHHHhCCCE--EEecccc
Q 013498 285 STHCQNDLGLSTANTIAGACAGARQ--VEVTING 316 (442)
Q Consensus 285 ~~H~HNDlGLA~ANalaAl~aGa~~--vd~Tv~G 316 (442)
.+|. |-|....-...|+++|.+- +|+|-..
T Consensus 78 alHl--DHg~~~e~i~~ai~~GFtSVMiDgS~lp 109 (286)
T 1gvf_A 78 ALHL--DHHESLDDIRRKVHAGVRSAMIDGSHFP 109 (286)
T ss_dssp EEEE--EEECCHHHHHHHHHTTCCEEEECCTTSC
T ss_pred EEEc--CCCCCHHHHHHHHHcCCCeEEECCCCCC
Confidence 7766 3444478889999999976 5775444
No 482
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=71.09 E-value=24 Score=36.10 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=40.6
Q ss_pred CCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCccc------------ccCHHHHHHHHHHHHHh
Q 013498 218 CDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTVG------------ITMPTEFGKLIADIKAN 275 (442)
Q Consensus 218 ~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~G------------~~~P~~v~~li~~l~~~ 275 (442)
++ |.... |.+.-++..+.+.++.+.++|+-.|.|-|.++ +...+++.+.|++.+..
T Consensus 146 lP-IiaD~-DtGfG~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A 213 (433)
T 3eol_A 146 AP-IVADA-EAGFGDPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLA 213 (433)
T ss_dssp CC-EEEEC-C---CCHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHH
T ss_pred CC-eEEEC-CCCCCCcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHH
Confidence 44 67776 45555666899999999999999999999986 24556777777666643
No 483
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=70.91 E-value=9.3 Score=38.58 Aligned_cols=103 Identities=13% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++.+++++.|++.|++.||--.| +++++..+.+++. .-+|.+.+=.-.+..+++..++.
T Consensus 186 N~~~~~~~A~~~~~~L~~~~i~~iEeP~~---~~d~~~~~~l~~~---------~~iPIa~dE~i~~~~~~~~~l~~--- 250 (405)
T 3rr1_A 186 HGRVSAPMAKVLIKELEPYRPLFIEEPVL---AEQAETYARLAAH---------THLPIAAGERMFSRFDFKRVLEA--- 250 (405)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSCEECSSC---CSSTHHHHHHHTT---------CSSCEEECTTCCSHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhc---------CCCCEEecCCcCCHHHHHHHHHH---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|. .+.++-.-+..+++++..|+..|+. +...+.
T Consensus 251 ~a~d~v~-------------~d~~~~GGitea~kia~lA~~~gi~-v~~h~~ 288 (405)
T 3rr1_A 251 GGVSILQ-------------PDLSHAGGITECVKIAAMAEAYDVA-LAPHCP 288 (405)
T ss_dssp CCCSEEC-------------CBTTTTTHHHHHHHHHHHHHTTTCE-ECCBCC
T ss_pred hCCCeEE-------------EChhhcCCHHHHHHHHHHHHHcCCE-EEeCCC
No 484
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=70.88 E-value=90 Score=31.30 Aligned_cols=162 Identities=13% Similarity=0.052 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCC-------ChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHH
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAA-------SKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEA 171 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~-------~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~ 171 (442)
+.++..+-++.+.+.|++.|.+=.... ...|.+.++.+++.++... ...+=+....+.++..+.++.
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~------~L~vDaN~~~~~~~Ai~~~~~ 252 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDN------DLMLECYMGWNLDYAKRMLPK 252 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSS------EEEEECTTCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCC------eEEEECCCCCCHHHHHHHHHH
Confidence 678888888988899999999832110 1346788888888765421 111222223345555445566
Q ss_pred HHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcC-CcE
Q 013498 172 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVG-ATT 250 (442)
Q Consensus 172 l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~G-ad~ 250 (442)
+...++..|.=.++..+ ++ .+.+..+..++. |.. |.+-.++..+. .+.+.| +|.
T Consensus 253 Le~~~i~~iEeP~~~~d--------------~~---~~~~l~~~~~iP-Ia~---dE~~~~~~~~~----~li~~~a~D~ 307 (412)
T 3stp_A 253 LAPYEPRWLEEPVIADD--------------VA---GYAELNAMNIVP-ISG---GEHEFSVIGCA----ELINRKAVSV 307 (412)
T ss_dssp HGGGCCSEEECCSCTTC--------------HH---HHHHHHHTCSSC-EEE---CTTCCSHHHHH----HHHHTTCCSE
T ss_pred HHhcCCCEEECCCCccc--------------HH---HHHHHHhCCCCC-EEe---CCCCCCHHHHH----HHHHcCCCCE
Confidence 66678777653322211 12 222233345554 443 33445555443 344555 555
Q ss_pred EeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHH
Q 013498 251 LNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIA 301 (442)
Q Consensus 251 I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANala 301 (442)
|.+ |..=+.-..+..++.....+. ++++..|+ |++.+--++
T Consensus 308 v~i-k~~~~GGit~a~kia~~A~a~-----gi~v~~h~----~~aa~~hla 348 (412)
T 3stp_A 308 LQY-DTNRVGGITAAQKINAIAEAA-----QIPVIPHA----GQMHNYHLT 348 (412)
T ss_dssp ECC-CHHHHTHHHHHHHHHHHHHHH-----TCCBCCSS----CSHHHHHHH
T ss_pred Eec-ChhhcCCHHHHHHHHHHHHHc-----CCEEEecc----HHHHHHHHH
Confidence 554 554444445556655555554 25577777 665544444
No 485
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=70.82 E-value=17 Score=34.20 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=82.4
Q ss_pred HHHHHHHHhHcCCCEEEEccCCCChh--HHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCCCEE
Q 013498 103 KLDIARQLAKLGVDIIEAGFPAASKE--DFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKRPRI 180 (442)
Q Consensus 103 kl~ia~~L~~~GV~~IEvG~p~~~~~--d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~~~v 180 (442)
-++.+....++|-|.|=+ +|..... ....++.|++.+... -++-+. +..+-++.+++. ..+.
T Consensus 27 pv~aA~~ae~aGAdgITv-HlReDrRHI~d~Dv~~L~~~~~~~--------lNlE~a--~t~emi~ia~~~----kP~~- 90 (243)
T 1m5w_A 27 PVQAAFIAEQAGADGITV-HLREDRRHITDRDVRILRQTLDTR--------MNLEMA--VTEEMLAIAVET----KPHF- 90 (243)
T ss_dssp HHHHHHHHHTTTCSEEEE-ECCTTCSSSCHHHHHHHHHHCSSE--------EEEEEC--SSHHHHHHHHHH----CCSE-
T ss_pred HHHHHHHHHHcCCCEEEe-CCCCCcccCCHHHHHHHHHhcCCC--------EEeccC--CCHHHHHHHHHc----CCCE-
Confidence 456677777999999998 6643211 012344454443211 133332 356677777775 4444
Q ss_pred EEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 181 HTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 181 ~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
.+++|.....+...-|++.....+.+.+.|+..++.|+. |++-+ | .|+ +.++.+.+.|+++|-|
T Consensus 91 vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIr-VSLFI-D---pd~----~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 91 CCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQ-VSLFI-D---ADE----EQIKAAAEVGAPFIEI 154 (243)
T ss_dssp EEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCE-EEEEE-C---SCH----HHHHHHHHTTCSEEEE
T ss_pred EEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCE-EEEEe-C---CCH----HHHHHHHHhCcCEEEE
Confidence 456677766666666788777789999999999999994 77655 3 333 4567888999999876
No 486
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=70.79 E-value=61 Score=29.33 Aligned_cols=103 Identities=8% Similarity=0.059 Sum_probs=59.7
Q ss_pred hhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCC-----HHHHH
Q 013498 163 RDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSD-----RKFLY 237 (442)
Q Consensus 163 ~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d-----~~~l~ 237 (442)
.+++...+.+...|+....+..+.. ++...++.++.+++.++.|+++|.+.|.+.+-...... .+.+.
T Consensus 51 ~~~~~~~~~~~~~gl~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~ 123 (272)
T 2q02_A 51 LNYNQVRNLAEKYGLEIVTINAVYP-------FNQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIK 123 (272)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEEETT-------TTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCeEEechhhhc-------cCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHH
Confidence 3455444555567776544432211 12222456788899999999999986665432111111 45556
Q ss_pred HHHHHHHHcCCcEEeccCc----ccccCHHHHHHHHHHHH
Q 013498 238 EILGEVIKVGATTLNIPDT----VGITMPTEFGKLIADIK 273 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT----~G~~~P~~v~~li~~l~ 273 (442)
++++.+.+.|+. |.+--. .-..++.++.++++.+.
T Consensus 124 ~l~~~a~~~gv~-l~~E~~~~~~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 124 RLSDLFARYDIQ-GLVEPLGFRVSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHHHHTTTCE-EEECCCCSTTCSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCE-EEEEecCCCcccccCHHHHHHHHHHhC
Confidence 666677777875 333222 23457888888887764
No 487
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=70.71 E-value=18 Score=35.98 Aligned_cols=102 Identities=22% Similarity=0.221 Sum_probs=66.6
Q ss_pred CCCCHHHHHHHHHHHhH--cCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHH
Q 013498 96 ATLTSKEKLDIARQLAK--LGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVK 173 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~--~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~ 173 (442)
-.++.++.+++++.|.+ .|+..||=-.| ++|++.++++++..+ +|...+=.-.+..|+...++.
T Consensus 195 ~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~-- 260 (379)
T 3r0u_A 195 QGWNLAQTKQFIEEINKYSLNVEIIEQPVK---YYDIKAMAEITKFSN---------IPVVADESVFDAKDAERVIDE-- 260 (379)
T ss_dssp TCCCHHHHHHHHHHHHTSCCCEEEEECCSC---TTCHHHHHHHHHHCS---------SCEEESTTCSSHHHHHHHHHT--
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEECCCC---cccHHHHHHHHhcCC---------CCEEeCCccCCHHHHHHHHHc--
Confidence 45789999999999999 89999996333 456777888877532 243333222345666666553
Q ss_pred hCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccC
Q 013498 174 YAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPE 226 (442)
Q Consensus 174 ~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~e 226 (442)
..++.|.+=.. +. .-+..+++++..|++.|+. +.++++
T Consensus 261 -~a~d~v~~k~~--------~~-----GGi~~~~~ia~~A~~~gi~-~~~~~~ 298 (379)
T 3r0u_A 261 -QACNMINIKLA--------KT-----GGILEAQKIKKLADSAGIS-CMVGCM 298 (379)
T ss_dssp -TCCSEEEECHH--------HH-----TSHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred -CCCCEEEECcc--------cc-----CCHHHHHHHHHHHHHcCCE-EEEeCC
Confidence 23566554111 11 2256778899999999985 777654
No 488
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=70.69 E-value=1.1e+02 Score=32.13 Aligned_cols=141 Identities=8% Similarity=-0.009 Sum_probs=78.5
Q ss_pred hhhHHHHHHHHHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEc--cC--CCCCCCHHHHH
Q 013498 162 ERDIKTAWEAVKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFS--PE--DAGRSDRKFLY 237 (442)
Q Consensus 162 ~~dI~~a~e~l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~--~e--dasr~d~~~l~ 237 (442)
.+|.-..++.+..+|++.|.+-.+.+=....+-++-+..+.++.+.+ .. .+.....+. .. .....+.+-..
T Consensus 46 tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~---~~--~~~~l~~L~R~~N~~G~~~ypddv~~ 120 (539)
T 1rqb_A 46 MEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRK---LM--PNSRLQMLLRGQNLLGYRHYNDEVVD 120 (539)
T ss_dssp GGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHH---HC--TTSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHH---hC--CCCEEEEEeccccccCcccCcccccH
Confidence 34433344555667999988865543111111124454454444332 11 133222232 11 11122334466
Q ss_pred HHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEee----cCCcchHHHHHHHHHHhCCCEEEe
Q 013498 238 EILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHC----QNDLGLSTANTIAGACAGARQVEV 312 (442)
Q Consensus 238 ~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~----HNDlGLA~ANalaAl~aGa~~vd~ 312 (442)
+.++.+.++|++.|++.|.+--. ..+.+.++.+++.-. .+...+-+ -.|....+.-+-++.++||+.|..
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd~--~ni~~~i~~ak~~G~---~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L 194 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDP--RNMAHAMAAVKKAGK---HAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIAL 194 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTC---EEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCCEEEEEEehhHH--HHHHHHHHHHHHCCC---eEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 77888999999999998876554 678888888887521 12222321 125566677777888899998754
No 489
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=70.65 E-value=12 Score=36.62 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEeccCccc-----------ccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHH
Q 013498 232 DRKFLYEILGEVIKVGATTLNIPDTVG-----------ITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTI 300 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~laDT~G-----------~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANal 300 (442)
+++.+.+.++...+.|++.|.+.-+-| ...++++.++++..++. ++++.+|++++. ...
T Consensus 170 ~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~-----g~~v~~H~~~~~-----~i~ 239 (423)
T 3feq_A 170 GVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA-----NTYVMAHAYTGR-----AIA 239 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT-----TCCEEEEEEEHH-----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC-----CCeEEEEeCChH-----HHH
Confidence 456677777777778887666543322 57788899998888875 367889998542 345
Q ss_pred HHHHhCCCEEE
Q 013498 301 AGACAGARQVE 311 (442)
Q Consensus 301 aAl~aGa~~vd 311 (442)
.++++|++.|.
T Consensus 240 ~~l~~g~~~i~ 250 (423)
T 3feq_A 240 RAVRCGVRTIE 250 (423)
T ss_dssp HHHHHTCCEEE
T ss_pred HHHHcCCCEEe
Confidence 67778998764
No 490
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=70.64 E-value=11 Score=37.24 Aligned_cols=99 Identities=15% Similarity=0.237 Sum_probs=64.6
Q ss_pred CCCHHHHH-HHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecc-cchhhHHHHHHHHHh
Q 013498 97 TLTSKEKL-DIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSR-CNERDIKTAWEAVKY 174 (442)
Q Consensus 97 ~fs~e~kl-~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r-~~~~dI~~a~e~l~~ 174 (442)
.++.++-+ ++++.|.+.|++.||=.+| +++++..+.+.+... +|.+.+ .+ .+.++++..++.
T Consensus 195 ~~~~~~a~~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPI~~d-E~~~~~~~~~~~i~~--- 258 (369)
T 2p8b_A 195 GWKNSANTLTALRSLGHLNIDWIEQPVI---ADDIDAMAHIRSKTD---------LPLMID-EGLKSSREMRQIIKL--- 258 (369)
T ss_dssp TTBSHHHHHHHHHTSTTSCCSCEECCBC---TTCHHHHHHHHHTCC---------SCEEES-TTCCSHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEECCCC---cccHHHHHHHHHhCC---------CCEEeC-CCCCCHHHHHHHHHh---
Confidence 35678888 9999999999999996443 467888888876431 232222 22 345666666654
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..++.|.+=. + +. .-+..+.++++.|+++|+. +.++.
T Consensus 259 ~~~d~v~ik~--~------~~-----GGit~~~~i~~~A~~~g~~-~~~~~ 295 (369)
T 2p8b_A 259 EAADKVNIKL--M------KC-----GGIYPAVKLAHQAEMAGIE-CQVGS 295 (369)
T ss_dssp TCCSEEEECH--H------HH-----TSHHHHHHHHHHHHHTTCE-EEECC
T ss_pred CCCCEEEeec--c------hh-----CCHHHHHHHHHHHHHcCCc-EEecC
Confidence 3466665411 1 11 2256677899999999985 77765
No 491
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=70.50 E-value=22 Score=34.99 Aligned_cols=78 Identities=17% Similarity=0.081 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHHcCCcEEecc----------Cccccc---CHHHHHHHHHHHHHhCCCCcceeEEE--ee-cCCcc--
Q 013498 232 DRKFLYEILGEVIKVGATTLNIP----------DTVGIT---MPTEFGKLIADIKANTPGIENVVIST--HC-QNDLG-- 293 (442)
Q Consensus 232 d~~~l~~~~~~~~~~Gad~I~la----------DT~G~~---~P~~v~~li~~l~~~~p~~~~v~i~~--H~-HNDlG-- 293 (442)
+++.+.+.++.+.++|+|.|.|- |-.|.. .|..+.++++.+++.++ ++|.+ .. -++..
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~----~PV~vKiR~g~~~~~~~ 143 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVR----VPVTVKMRLGLEGKETY 143 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS----SCEEEEEESCBTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC----CceEEEEecCcCccccH
Confidence 56777788888888888876553 444543 58889999999998773 45555 22 22221
Q ss_pred -hHHHHHHHHHHhCCCEEEec
Q 013498 294 -LSTANTIAGACAGARQVEVT 313 (442)
Q Consensus 294 -LA~ANalaAl~aGa~~vd~T 313 (442)
-...-+..+.++|++.|.++
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 23444556678899999875
No 492
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=70.27 E-value=36 Score=31.92 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=66.0
Q ss_pred HHHHHHHHHhHcCCCEEEE----ccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhCCC
Q 013498 102 EKLDIARQLAKLGVDIIEA----GFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYAKR 177 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEv----G~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~g~ 177 (442)
+-.++++...+.|.+.|-+ ++...+.+ .++.+.+... .|.+..---.+..+++.+.+ +|.
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~---~l~~i~~~v~---------lPvl~kdfI~d~~qi~~a~~----~GA 129 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLL---DLKRVREAVD---------LPLLRKDFVVDPFMLEEARA----FGA 129 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHH---HHHHHHHHCC---------SCEEEESCCCSHHHHHHHHH----TTC
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHH---HHHHHHHhcC---------CCEEECCcCCCHHHHHHHHH----cCC
Confidence 4578899999999999988 33333444 4444444321 23332211124446665554 599
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEec
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNI 253 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~l 253 (442)
+.|++....- + +.+.++++++++.|+. +.+.. ++++++ +.+.+.|++.|.+
T Consensus 130 D~VlL~~~~l-------------~--~~l~~l~~~a~~lGl~-~lvev-----~~~~E~----~~a~~~gad~IGv 180 (254)
T 1vc4_A 130 SAALLIVALL-------------G--ELTGAYLEEARRLGLE-ALVEV-----HTEREL----EIALEAGAEVLGI 180 (254)
T ss_dssp SEEEEEHHHH-------------G--GGHHHHHHHHHHHTCE-EEEEE-----CSHHHH----HHHHHHTCSEEEE
T ss_pred CEEEECccch-------------H--HHHHHHHHHHHHCCCe-EEEEE-----CCHHHH----HHHHHcCCCEEEE
Confidence 9998754311 1 3466788889999985 44333 233433 3566778887665
No 493
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=70.23 E-value=15 Score=36.05 Aligned_cols=41 Identities=15% Similarity=0.309 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHH-HHHHcCCCeEEEccCCCCCCCHHHHHHHHH
Q 013498 197 KTKQQVVEIARSMVK-FARSLGCDDVEFSPEDAGRSDRKFLYEILG 241 (442)
Q Consensus 197 ~s~~e~l~~~~~~v~-~ar~~G~~~V~f~~edasr~d~~~l~~~~~ 241 (442)
++.++-+ +.++ ...+.|+..++++..-.+..+.+++.++.+
T Consensus 38 ~~~~~k~----~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~ 79 (337)
T 3ble_A 38 FSTSEKL----NIAKFLLQKLNVDRVEIASARVSKGELETVQKIME 79 (337)
T ss_dssp CCHHHHH----HHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHH
T ss_pred cCHHHHH----HHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHh
Confidence 4544444 3444 445567766666542222334455555544
No 494
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=70.21 E-value=84 Score=30.64 Aligned_cols=165 Identities=12% Similarity=0.119 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHH-HHHHHHHhCCC
Q 013498 99 TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIK-TAWEAVKYAKR 177 (442)
Q Consensus 99 s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~-~a~e~l~~~g~ 177 (442)
+.++..+-++.+.+.|++.|++-.......+.+.++.+++.++..+ ...+-+....+.++.. ..++.+...++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~------~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERVGNDI------AIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHHCTTS------EEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHhCCCC------eEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 5677777888888999999998332222446788888888764321 1122222223344443 34455555677
Q ss_pred CEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCCCCCHHHHHHHHHHHHHcCCcEEeccCcc
Q 013498 178 PRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAGRSDRKFLYEILGEVIKVGATTLNIPDTV 257 (442)
Q Consensus 178 ~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edasr~d~~~l~~~~~~~~~~Gad~I~laDT~ 257 (442)
..+.=.++..+ ++ .+.+..+..++. |.. |.+-.+++.+.++++ +-.+|.|.+ |..
T Consensus 215 ~~iEqP~~~~d--------------~~---~~~~l~~~~~iP-I~~---dE~~~~~~~~~~~i~---~~~~d~v~i-k~~ 269 (369)
T 2p8b_A 215 DWIEQPVIADD--------------ID---AMAHIRSKTDLP-LMI---DEGLKSSREMRQIIK---LEAADKVNI-KLM 269 (369)
T ss_dssp SCEECCBCTTC--------------HH---HHHHHHHTCCSC-EEE---STTCCSHHHHHHHHH---HTCCSEEEE-CHH
T ss_pred cEEECCCCccc--------------HH---HHHHHHHhCCCC-EEe---CCCCCCHHHHHHHHH---hCCCCEEEe-ecc
Confidence 66542222111 12 122222334554 443 334456665544432 234676665 444
Q ss_pred cccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHH
Q 013498 258 GITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANT 299 (442)
Q Consensus 258 G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANa 299 (442)
=+.-+.+..++....++. ++++.+|+-...+.+++-+
T Consensus 270 ~~GGit~~~~i~~~A~~~-----g~~~~~~~~~es~i~~~a~ 306 (369)
T 2p8b_A 270 KCGGIYPAVKLAHQAEMA-----GIECQVGSMVESSVASSAG 306 (369)
T ss_dssp HHTSHHHHHHHHHHHHHT-----TCEEEECCSSCCHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHc-----CCcEEecCCCccHHHHHHH
Confidence 444556666666666654 2667777765555555433
No 495
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=69.89 E-value=10 Score=37.70 Aligned_cols=102 Identities=10% Similarity=0.040 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|+..||=-+| +++++..+.+++. .-+|...+=.-.+..+++..++.
T Consensus 205 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~---------~~iPIa~dE~~~~~~~~~~~i~~--- 269 (372)
T 3tj4_A 205 NGKWDLPTCQRFCAAAKDLDIYWFEEPLW---YDDVTSHARLARN---------TSIPIALGEQLYTVDAFRSFIDA--- 269 (372)
T ss_dssp TTCCCHHHHHHHHHHTTTSCEEEEESCSC---TTCHHHHHHHHHH---------CSSCEEECTTCCSHHHHHHHHHT---
T ss_pred CCCCCHHHHHHHHHHHhhcCCCEEECCCC---chhHHHHHHHHhh---------cCCCEEeCCCccCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
..++.|. .+.++-.-+..+++++..|+++|+. +....
T Consensus 270 ~~~d~v~-------------~k~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 306 (372)
T 3tj4_A 270 GAVAYVQ-------------PDVTRLGGITEYIQVADLALAHRLP-VVPHA 306 (372)
T ss_dssp TCCSEEC-------------CCTTTTTHHHHHHHHHHHHHHTTCC-BCCCC
T ss_pred CCCCEEE-------------eCccccCCHHHHHHHHHHHHHcCCE-EEecC
No 496
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=69.86 E-value=10 Score=38.55 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=65.3
Q ss_pred CCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHhC
Q 013498 96 ATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKYA 175 (442)
Q Consensus 96 ~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~~ 175 (442)
-.++.++-+++++.|.+.|++.||--.| +++++..+.+++... +|.+.+=.-.+..+++..++. .
T Consensus 236 ~~~~~~~A~~~~~~L~~~~i~~iEqP~~---~~d~~~~~~l~~~~~---------iPIa~dE~~~~~~~~~~~i~~---~ 300 (425)
T 3vcn_A 236 HRLTPIEAARLGKDLEPYRLFWLEDSVP---AENQAGFRLIRQHTT---------TPLAVGEIFAHVWDAKQLIEE---Q 300 (425)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEECCSC---CSSTTHHHHHHHHCC---------SCEEECTTCCSGGGTHHHHHT---T
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCCC---hhhHHHHHHHHhcCC---------CCEEeCCCcCCHHHHHHHHHc---C
Confidence 3578999999999999999999997443 345666777776532 243333222356677766653 2
Q ss_pred CCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEcc
Q 013498 176 KRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSP 225 (442)
Q Consensus 176 g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~ 225 (442)
.++.|.+= .++-.-+..+++++..|++.|+. +....
T Consensus 301 a~d~v~~k-------------~~~~GGit~~~~ia~~A~~~gi~-~~~h~ 336 (425)
T 3vcn_A 301 LIDYLRAT-------------VLHAGGITNLKKIAAFADLHHVK-TGCHG 336 (425)
T ss_dssp CCSEECCC-------------TTTTTHHHHHHHHHHHHGGGTCE-ECCCC
T ss_pred CCCeEecC-------------hhhcCCHHHHHHHHHHHHHcCCE-Eeecc
Confidence 35555431 11223466778899999999985 65544
No 497
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=69.86 E-value=63 Score=31.89 Aligned_cols=144 Identities=11% Similarity=0.115 Sum_probs=68.1
Q ss_pred HHHHHHHHHhHcCCCEEEEcc---CCCChhHHH-----HHHHHHHHhcccccccCC-ccceEeeecccchhhHHHHHHHH
Q 013498 102 EKLDIARQLAKLGVDIIEAGF---PAASKEDFE-----AVRTIAKEVGNAVDAESG-YVPVICGLSRCNERDIKTAWEAV 172 (442)
Q Consensus 102 ~kl~ia~~L~~~GV~~IEvG~---p~~~~~d~e-----~v~~l~~~~~~~~~~~~~-l~~~i~~~~r~~~~dI~~a~e~l 172 (442)
..+++++...++|++.|-+.- ...+|++++ .++++.+.+..... + -+|. ..++.....- ++.+
T Consensus 198 ~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~---g~~~pv-i~f~~g~~~~----l~~l 269 (368)
T 4exq_A 198 AVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHD---GARVPA-IAFTKGGGLW----LEDL 269 (368)
T ss_dssp HHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEET---TEECCE-EEEETTCGGG----HHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcC---CCCCcE-EEEcCCcHHH----HHHH
Confidence 334455566788999988742 234666654 55566665432100 0 1343 3344333222 3334
Q ss_pred HhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEE-ccCC--CCCCCHHHHHHHHHHHHHc-CC
Q 013498 173 KYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEF-SPED--AGRSDRKFLYEILGEVIKV-GA 248 (442)
Q Consensus 173 ~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f-~~ed--asr~d~~~l~~~~~~~~~~-Ga 248 (442)
.+.|++.+.+-- ..+.+++. +..|-+ +.+ +--| .-..+++.+.+-++.+++. |.
T Consensus 270 ~~~g~d~i~~d~-----------~~dl~~ak----------~~~g~~-~~l~Gnldp~~L~gt~e~I~~~v~~~l~~~g~ 327 (368)
T 4exq_A 270 AATGVDAVGLDW-----------TVNLGRAR----------ERVAGR-VALQGNLDPTILFAPPEAIRAEARAVLDSYGN 327 (368)
T ss_dssp HTSSCSEEECCT-----------TSCHHHHH----------HHHTTS-SEEEEEECGGGGGSCHHHHHHHHHHHHHHHCS
T ss_pred HHhCCCEEeeCC-----------CCCHHHHH----------HHhCCC-EEEEECCCHHHhCCCHHHHHHHHHHHHHHhCC
Confidence 556888776421 12222211 112322 221 1111 1234667777777666654 32
Q ss_pred ---cEEeccCccc-ccCHHHHHHHHHHHHHh
Q 013498 249 ---TTLNIPDTVG-ITMPTEFGKLIADIKAN 275 (442)
Q Consensus 249 ---d~I~laDT~G-~~~P~~v~~li~~l~~~ 275 (442)
..+++.-.+- -..|+.+..+++.+++.
T Consensus 328 ~~g~I~n~Ghgi~p~tp~Env~a~veav~~~ 358 (368)
T 4exq_A 328 HPGHVFNLGHGISQFTPPEHVAELVDEVHRH 358 (368)
T ss_dssp CSCEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 3333322221 23566677777777653
No 498
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=69.75 E-value=9.5 Score=37.78 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHHHhcccccccCCccceEeeecccchhhHHHHHHHHHh
Q 013498 95 GATLTSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAKEVGNAVDAESGYVPVICGLSRCNERDIKTAWEAVKY 174 (442)
Q Consensus 95 g~~fs~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~l~~ 174 (442)
+-.++.++-+++++.|++.|+..||=-+| ++|++.++.+++. .-+|...+=.-.+..|++..++.
T Consensus 196 n~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~~~~~~~~l~~~---------~~iPia~dE~~~~~~~~~~~~~~--- 260 (370)
T 1chr_A 196 NQAWDEQVASVYIPELEALGVELIEQPVG---RENTQALRRLSDN---------NRVAIMADESLSTLASAFDLARD--- 260 (370)
T ss_dssp TTCCCTTHHHHHTHHHHTTTEEEEECCSC---TTCHHHHHHHHHH---------SCSEEEESSSCCSHHHHHHHHTT---
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEECCCC---cccHHHHHHHHhh---------CCCCEEeCCCcCCHHHHHHHHHc---
Q ss_pred CCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 175 AKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 175 ~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +.++-.-+..+++++..|+++|+. +..+.+..+
T Consensus 261 ~~~d~v~~-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~~~~~es 301 (370)
T 1chr_A 261 RSVDVFSL-------------KLCNMGGVSATQKIAAVAEASGIA-SYGGTMLDS 301 (370)
T ss_dssp TSCSEEEE-------------CTTTSCSHHHHHHHHHHHHHHTCE-EEECCSCCT
T ss_pred CCCCEEEE-------------CccccCCHHHHHHHHHHHHHcCCe-EEecCCCcc
No 499
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=69.74 E-value=15 Score=36.73 Aligned_cols=105 Identities=14% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCC--CHHHHHHHHHHHhHcCCCEEEEccCCCChhHHHHHHHHHH-HhcccccccCCccceEeeecccchhhHHHHHHH
Q 013498 95 GATL--TSKEKLDIARQLAKLGVDIIEAGFPAASKEDFEAVRTIAK-EVGNAVDAESGYVPVICGLSRCNERDIKTAWEA 171 (442)
Q Consensus 95 g~~f--s~e~kl~ia~~L~~~GV~~IEvG~p~~~~~d~e~v~~l~~-~~~~~~~~~~~l~~~i~~~~r~~~~dI~~a~e~ 171 (442)
+-.+ +.++-+++++.|.+.|++.||-.+| +++++..+.+.+ . .-+|.+.+=.-.+.++++..++.
T Consensus 201 n~~~~~~~~~a~~~~~~l~~~~i~~iEqP~~---~~d~~~~~~l~~~~---------~~iPI~~dE~~~~~~~~~~~i~~ 268 (401)
T 2hzg_A 201 GQIFGEDVEAAAARLPTLDAAGVLWLEEPFD---AGALAAHAALAGRG---------ARVRIAGGEAAHNFHMAQHLMDY 268 (401)
T ss_dssp TTTTTTCHHHHHTTHHHHHHTTCSEEECCSC---TTCHHHHHHHHTTC---------CSSEEEECTTCSSHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEECCCC---ccCHHHHHHHHhhC---------CCCCEEecCCcCCHHHHHHHHHC
Q ss_pred HHhCCCCEEEEeecCChHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCeEEEccCCCC
Q 013498 172 VKYAKRPRIHTFIATSGIHMEHKLRKTKQQVVEIARSMVKFARSLGCDDVEFSPEDAG 229 (442)
Q Consensus 172 l~~~g~~~v~i~~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~ar~~G~~~V~f~~edas 229 (442)
..++.|.+ +..+-.-+..+.+++++|++.|+. +..+ ...+
T Consensus 269 ---~~~d~v~i-------------k~~~~GGit~~~~i~~~A~~~g~~-~~~h-~~es 308 (401)
T 2hzg_A 269 ---GRIGFIQI-------------DCGRIGGLGPAKRVADAAQARGIT-YVNH-TFTS 308 (401)
T ss_dssp ---SCCSEEEE-------------CHHHHTSHHHHHHHHHHHHHHTCE-EEEC-CCSC
T ss_pred ---CCCCEEEe-------------CcchhCCHHHHHHHHHHHHHcCCE-EecC-CCCc
No 500
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=69.65 E-value=11 Score=34.90 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEeccCcccccCHHHHHHHHHHHHHhCCCCcceeEEEeecCCcchHHHHHHHHHHhCCCEE
Q 013498 231 SDRKFLYEILGEVIKVGATTLNIPDTVGITMPTEFGKLIADIKANTPGIENVVISTHCQNDLGLSTANTIAGACAGARQV 310 (442)
Q Consensus 231 ~d~~~l~~~~~~~~~~Gad~I~laDT~G~~~P~~v~~li~~l~~~~p~~~~v~i~~H~HNDlGLA~ANalaAl~aGa~~v 310 (442)
.+++...++++.+.+.|++.|.+.=+ +| ...+.|+.+++.+|+ +.|+.-+=-| ...+..|+++||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~-~a~~~I~~l~~~~p~---~~IGAGTVlt----~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TE-AGLAAISAIKKAVPE---AIVGAGTVCT----ADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTT---SEEEEECCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Cc-cHHHHHHHHHHHCCC---CeEeeccccC----HHHHHHHHHcCCCEE
Confidence 35678899999999999999888422 23 345778889999985 6787754443 567789999999998
Done!