BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013500
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 194/467 (41%), Positives = 252/467 (53%), Gaps = 83/467 (17%)
Query: 1 MSSYLS---GGGRTYALDLEIIKSPSHSTGTSHTSSSPLSTLSEASNS-PLAISTRKART 56
MS+ LS GG Y+ +LE +KSP S+ T+ T ++ S+ S++ PLAISTRK RT
Sbjct: 1 MSACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRT 60
Query: 57 PRKRPNQTYNEAAALLSTACPNIFSTKHLTNLNKFTTKPPDHRRHHQQQEPNQQFF---- 112
RKRPNQTYNEAA LLSTA PNIFS+ NL+ + N F+
Sbjct: 61 QRKRPNQTYNEAATLLSTAYPNIFSS----NLSS---------KQKTHSSSNSHFYGPLL 107
Query: 113 ---DESSELLLPFRVIDDSGFLLHQPILDKPRFPLEPKVTKFCENKLSCQNSGEVDFQGA 169
D++S+LLLP+ I++ FL H I K F F + K NSG + G
Sbjct: 108 SDNDDASDLLLPYESIEEPDFLFHPTIQTKTEF--------FSDQKEV--NSGGDCYGG- 156
Query: 170 NHNPMEVQISSEFDEDFDAESIILDEEFEEGIDSIMGNL----------SVKKDAIESDD 219
E++ +F ++FDAESI LDE+ EEGIDSIMG + + + +
Sbjct: 157 -----EIE-KFDFSDEFDAESI-LDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRG 209
Query: 220 GHS---------QVHNSNCWYGNPMGIGFGGKLELGFGMRSGMKALRQVDEGNWWNF-PI 269
G S Q+ N W + G F LG G+RS ALR+ D+ W +
Sbjct: 210 GRSSSNRIGKLEQMMMINSWNRSSNGFNF----PLGLGLRS---ALRENDDTKLWKIHTV 262
Query: 270 DVLQISPKFNN--SSGTGNSNRKGSSEKRKKKVGKEK----------PVAESKVSELPAK 317
D QISP+ + ++ + S+ +K + EK V + ++E +
Sbjct: 263 DFEQISPRIQTVKTETAISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSL 322
Query: 318 EESPIPKANSGELLLKLQYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQIDLFSDG 377
E++ LLKL YD VL AWS K SPF DE + DV+ARLAQIDLF D
Sbjct: 323 EDTEETSLKRTGPLLKLDYDGVLEAWSDKTSPFPDE--IQGSEAVDVNARLAQIDLFGDS 380
Query: 378 GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPN 424
G+REASVLRYKEKRRTRLFSKKIRYQVRK+NAD+RPRMKGRFVRRPN
Sbjct: 381 GMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 427
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 24/114 (21%)
Query: 330 LLLKLQYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQIDL---------------- 373
L+L+L YD V++ W G+G P+ S P + D+S A +
Sbjct: 293 LMLRLNYDSVISTWGGQGPPW--SSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGC 350
Query: 374 -----FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
F DGG REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMKGRFV+R
Sbjct: 351 LPSSGFGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6
PE=2 SV=2
Length = 406
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 18/111 (16%)
Query: 330 LLLKLQYDDVLNAWSGKGSPF---------LDESLAPDGQGNDVSARLAQIDLFSDGGL- 379
L+L+L Y+ V++ W G+G P+ LD P + A + F GL
Sbjct: 289 LMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLH 348
Query: 380 --------REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMKGRFV+R
Sbjct: 349 LGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7
PE=2 SV=1
Length = 392
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 20/112 (17%)
Query: 330 LLLKLQYDDVLNAWSGKGSPFLDESLAPDGQ--GNDVSARLA---QIDLFSDG------- 377
L L+L Y V++AW GSP+ + P+ GN + + + SDG
Sbjct: 277 LFLRLDYGAVISAWDNHGSPW-KTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQG 335
Query: 378 -------GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
G REA VLRYKEKRRTRLFSKKIRY+VRK+NA++RPR+KGRFV+R
Sbjct: 336 RDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8
PE=2 SV=2
Length = 319
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
Query: 333 KLQYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQ--IDLFSDGGLREASVLRYKEK 390
+L Y++V+ AW + SP D + N S +L I+ REA V RY++K
Sbjct: 229 RLNYENVIAAWDKQESP-------RDVKNNTSSFQLVPPGIEEKRVRSEREARVWRYRDK 281
Query: 391 RRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
R+ RLF KKIRY+VRKVNAD+RPRMKGRFVRR
Sbjct: 282 RKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%)
Query: 355 LAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPR 414
L P G N S Q+ L REA VLRY+EK++ R F K IRY+ RK A+ RPR
Sbjct: 301 LTPAGAINLFSGPSLQMSLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPR 360
Query: 415 MKGRFVRRPN 424
+KGRF +R +
Sbjct: 361 IKGRFAKRSD 370
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 351 LDESLAPDGQGNDVSARLAQIDLFSDGGL-------REASVLRYKEKRRTRLFSKKIRYQ 403
++ + PDG N+ S + I + GG REA VLRY+EKR+ R F K IRY
Sbjct: 250 IEYGVVPDGNTNN-SVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYA 308
Query: 404 VRKVNADRRPRMKGRFVRRPNSNAQD 429
RK A+ RPR+KGRF +R + D
Sbjct: 309 SRKAYAESRPRIKGRFAKRTETENDD 334
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQD 429
REA VLRY+EKR+ R F K IRY RK A+ RPR+KGRF +R +S D
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSREND 278
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQDE 430
REA V+RY+EKR+ R F K IRY RK A+ RPR+KGRF +R ++N ++
Sbjct: 295 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESND 345
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
REA VLRY+EK++TR F K IRY RK A+ RPR+KGRF +R
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNA 427
REA++++++ KR+ R F KK+RYQ RK A++RPR+KG+FVR NS+A
Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSDA 464
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
REA VLRY+EKR+TR F K IRY RK A+ RPR+ GRF +R
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
Query: 372 DLFSDG-GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQDE 430
DL+ +G REA++ ++++KR+ R F KK+RYQ RK A++RPR++G+FVR+ S +D+
Sbjct: 703 DLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--SGQEDQ 760
Query: 431 RGK 433
G+
Sbjct: 761 AGQ 763
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
REA VLRY+EK++ R F K IRY RK A++RPR+KGRF ++
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
Query: 372 DLFSDG-GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQDE 430
DL+ +G REA++ ++++KR+ R F KK+RYQ RK A++RPR++G+FVR+ S +D+
Sbjct: 703 DLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQ--SGQEDQ 760
Query: 431 RGK 433
G+
Sbjct: 761 AGQ 763
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQD 429
REA++ ++++KR+ R F KK+RYQ RK A++RPR++G+FVR+ + D
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 718
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 18/99 (18%)
Query: 335 QYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTR 394
Q V ++WS G+P +E R+ ++D RE ++L+++ KR R
Sbjct: 506 QMSMVHHSWSPAGNPPSNE------------VRVNKLDR------REEALLKFRRKRNQR 547
Query: 395 LFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQDERGK 433
F KKIRY RK A+RRPR+KG+FVR+ N D G+
Sbjct: 548 CFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQ 586
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 36/43 (83%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
REA++ +++ KR+ R F KK+RYQ RK+ A++RPR+KG+FVR+
Sbjct: 574 REAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9
PE=2 SV=1
Length = 372
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVR 421
R +V+RYKEK++ R F K++RY RK AD R R+KGRFV+
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 38/49 (77%)
Query: 374 FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
F+ R A+V+++++KR+ R F KK+RYQ RK A++RPR++G+FVR+
Sbjct: 676 FTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 38/49 (77%)
Query: 374 FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
F+ R A+V+++++KR+ R F KK+RYQ RK A++RPR++G+FVR+
Sbjct: 676 FTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 375 SDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVR 421
S R +V+RYKEK++ R F K++RY RK AD R R+KGRFV+
Sbjct: 311 SHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVK 357
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVR 421
R+ ++ RYKEK++TR + K IRY+ RK A+ R R+KGRFV+
Sbjct: 357 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVKGRFVK 398
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 229 CWYGNPMGIGFGGKLELGFGMRSGMKALRQVDE-GNW---WNFPIDVLQIS--PKFNNSS 282
C + N + K ++G G ++GM ++ +E G+ + + L+ + N SS
Sbjct: 279 CAHVNRLKEAEDQKEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERNNDDTLNRSS 338
Query: 283 GTGNSNRKGSSEKRK---------KKVGKEKPVAESKVSELPAKEESPIPKANSGELLLK 333
G K S R+ KK +++ S L S K N+G K
Sbjct: 339 GNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAK 398
Query: 334 LQYDDVLNAWSGKGSP---FLDESLAPDG---QGNDVSARLAQIDLFSDGGLREASVLRY 387
++ + + S SP L S + D Q + S R AQ REA+++++
Sbjct: 399 KAPEENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQ---------REAALMKF 449
Query: 388 KEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRR 422
+ KR+ R F KK+RY RK A++RP +KG+F+R+
Sbjct: 450 RLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 32/50 (64%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNAQD 429
R + LRYKEK+ R F K+IRY RK AD R R+KGRFV+ +S D
Sbjct: 307 RNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVKAGDSYDYD 356
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 36/46 (78%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNS 425
REA++ +++ KR+ R + KK+RY+ RK A++RPR+KG+FVR+ S
Sbjct: 509 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 554
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVR 421
R ++ RYKEKR+TR + K IRY+ RK AD R R++GRFV+
Sbjct: 385 RGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVK 426
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVR 421
R +++ RYKEK+++R + K IRY+ RKV A+ R R++GRF +
Sbjct: 287 RNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPN 424
R A++ +++ KR+ R F KK+RY RK A+ RPR++G+FVR+ N
Sbjct: 443 RAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQAN 487
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSN 426
R AS+LR++EKR+ R F K IRY VRK A R R KG+F +SN
Sbjct: 143 RLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSN 189
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSN 426
R AS++R++EKR+ R F KKIRY VRK A R R KG+F ++N
Sbjct: 147 RLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNN 193
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 379 LREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVR 421
LR+ + RYK+K+ R+F K+IRY RK AD R R+KGRFV+
Sbjct: 275 LRDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVK 317
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFV 420
R S+ R+++KR R F KK+RY VR+ A R R KG+F
Sbjct: 146 RAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFT 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,201,108
Number of Sequences: 539616
Number of extensions: 7842477
Number of successful extensions: 20493
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 20404
Number of HSP's gapped (non-prelim): 121
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)