Query         013502
Match_columns 442
No_of_seqs    153 out of 234
Neff          4.4 
Searched_HMMs 13730
Date          Mon Mar 25 11:47:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013502.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013502hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2efka1 a.238.1.4 (A:10-288) C  71.3      28   0.002   29.3  15.1   17  187-203    99-115 (279)
  2 d1fxka_ a.2.5.1 (A:) Prefoldin  63.4      20  0.0015   27.6   9.0   31  222-252    70-100 (107)
  3 d1fxkc_ a.2.5.1 (C:) Prefoldin  61.5      24  0.0017   27.7   9.4   26  178-203    17-42  (133)
  4 d1fxka_ a.2.5.1 (A:) Prefoldin  54.8      41   0.003   25.7  10.8   34  218-251     9-42  (107)
  5 d2efla1 a.238.1.4 (A:1-288) Fo  52.3      62  0.0045   27.0  14.5   23  181-203   102-124 (288)
  6 d1seta1 a.2.7.1 (A:1-110) Sery  51.8      46  0.0034   25.3  11.0   22  181-202    33-54  (110)
  7 d2azeb1 e.63.1.2 (B:201-301) T  49.0      13 0.00098   29.2   5.5   31  228-258     5-35  (101)
  8 d1qvra2 c.37.1.20 (A:149-535)   48.1      46  0.0033   31.2  10.3   23  164-187   180-202 (387)
  9 d1ykhb1 a.252.1.1 (B:2-130) RN  46.4      66  0.0048   25.8   9.7   32  211-242    85-116 (129)
 10 d1qvra2 c.37.1.20 (A:149-535)   45.6      35  0.0026   32.0   9.1   13   24-36     39-51  (387)
 11 d1seta1 a.2.7.1 (A:1-110) Sery  45.0      59  0.0043   24.7  11.2   67  217-289    28-94  (110)
 12 d1wu9a1 a.245.1.1 (A:191-249)   40.2      17  0.0012   26.2   4.4   26  178-203    10-35  (59)
 13 d1ivsa1 a.2.7.3 (A:797-862) Va  36.6      41   0.003   23.6   6.2   21  224-244     4-24  (66)
 14 d2azeb1 e.63.1.2 (B:201-301) T  32.3      41   0.003   26.2   5.9   21  299-319    51-71  (101)
 15 d1nkpa_ a.38.1.1 (A:) Myc prot  31.6      58  0.0042   23.9   6.5   30  220-249    55-84  (88)
 16 d1ivsa1 a.2.7.3 (A:797-862) Va  25.9      99  0.0072   21.4   7.4   22  182-203     3-24  (66)
 17 d1urua_ a.238.1.1 (A:) Amphiph  24.0 1.6E+02   0.012   23.2  11.7   25  279-303   110-134 (217)
 18 d1fxkc_ a.2.5.1 (C:) Prefoldin  22.6 1.6E+02   0.011   22.5  13.8   32  268-299    97-128 (133)
 19 d1nkpb_ a.38.1.1 (B:) Max prot  21.9      46  0.0034   24.2   4.2   28  221-248    51-78  (83)
 20 d2inca1 a.25.1.2 (A:2-492) Tol  21.4      17  0.0012   35.8   1.9   21   13-34    386-406 (491)
 21 d2e50a1 d.305.1.1 (A:1-222) Pr  20.3 1.9E+02   0.014   24.7   8.7   23  224-246    26-48  (222)
 22 d2cupa3 g.39.1.3 (A:8-34) Four  20.2      16  0.0012   22.4   0.9   14   24-40      1-14  (27)

No 1  
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.26  E-value=28  Score=29.32  Aligned_cols=17  Identities=6%  Similarity=-0.003  Sum_probs=7.0

Q ss_pred             HHHHHHHHHHHHHHHHh
Q 013502          187 DVTRDIEAYEACLQRLE  203 (442)
Q Consensus       187 ~~~~E~d~Y~~fL~~Le  203 (442)
                      +.+..++.+....+++.
T Consensus        99 ~~~~~~k~~~~~~~~~~  115 (279)
T d2efka1          99 EMKQERKMHFQEGRRAQ  115 (279)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            33334444444444443


No 2  
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=63.43  E-value=20  Score=27.56  Aligned_cols=31  Identities=23%  Similarity=0.393  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          222 IEEEERKLEAAIEETEKQNAEVNAELKELEL  252 (442)
Q Consensus       222 LE~EE~~L~~eLeeLEkE~~~l~~El~~le~  252 (442)
                      |+.....+..+++.++++...+..++.+++.
T Consensus        70 l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~  100 (107)
T d1fxka_          70 LQEKLETLQLREKTIERQEERVMKKLQEMQV  100 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444455555555555555555554444


No 3  
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=61.51  E-value=24  Score=27.68  Aligned_cols=26  Identities=15%  Similarity=0.275  Sum_probs=15.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013502          178 SDKLDKEVDDVTRDIEAYEACLQRLE  203 (442)
Q Consensus       178 le~Ld~qle~~~~E~d~Y~~fL~~Le  203 (442)
                      ++.|+.+++.++.....|....+.|+
T Consensus        17 l~~l~~~i~~l~~~~~e~~~~~~~L~   42 (133)
T d1fxkc_          17 VELIQQQMEAVRATISELEILEKTLS   42 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55566666666666666665555443


No 4  
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=54.77  E-value=41  Score=25.67  Aligned_cols=34  Identities=18%  Similarity=0.280  Sum_probs=16.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          218 EKLKIEEEERKLEAAIEETEKQNAEVNAELKELE  251 (442)
Q Consensus       218 El~~LE~EE~~L~~eLeeLEkE~~~l~~El~~le  251 (442)
                      ++..+..+...+...+..++.+..+...-+.+++
T Consensus         9 ~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~   42 (107)
T d1fxka_           9 QFQQLQQQAQAISVQKQTVEMQINETQKALEELS   42 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444445555555555555554444444444333


No 5  
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.27  E-value=62  Score=27.00  Aligned_cols=23  Identities=9%  Similarity=0.114  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Q 013502          181 LDKEVDDVTRDIEAYEACLQRLE  203 (442)
Q Consensus       181 Ld~qle~~~~E~d~Y~~fL~~Le  203 (442)
                      |..-..+.++.++.+.....++.
T Consensus       102 l~~~~~~~~~~~K~~~~~~~k~~  124 (288)
T d2efla1         102 LARYVQELKQERKSNFHDGRKAQ  124 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333344444444444444443


No 6  
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=51.80  E-value=46  Score=25.34  Aligned_cols=22  Identities=18%  Similarity=0.468  Sum_probs=9.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Q 013502          181 LDKEVDDVTRDIEAYEACLQRL  202 (442)
Q Consensus       181 Ld~qle~~~~E~d~Y~~fL~~L  202 (442)
                      |+.+...+..+.+...+--+.+
T Consensus        33 ld~~rr~l~~~~e~l~~~rN~~   54 (110)
T d1seta1          33 LDREVQELKKRLQEVQTERNQV   54 (110)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4444444444444444333333


No 7  
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.02  E-value=13  Score=29.16  Aligned_cols=31  Identities=3%  Similarity=0.129  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          228 KLEAAIEETEKQNAEVNAELKELELKSKRFK  258 (442)
Q Consensus       228 ~L~~eLeeLEkE~~~l~~El~~le~e~~~L~  258 (442)
                      .|.+||+.|+.+..+|++.+..++.....+.
T Consensus         5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~lt   35 (101)
T d2azeb1           5 GLTQDLRQLQESEQQLDHLMNICTTQLRLLS   35 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3555555555555555555555555444443


No 8  
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=48.09  E-value=46  Score=31.18  Aligned_cols=23  Identities=22%  Similarity=0.382  Sum_probs=14.1

Q ss_pred             CcCCcchHHHHHHHHHHHHHHHHH
Q 013502          164 QVEQPLCLECMRVLSDKLDKEVDD  187 (442)
Q Consensus       164 ~IDhPLC~ECtd~Lle~Ld~qle~  187 (442)
                      .|+-|-=.++...| ..+...++.
T Consensus       180 ~v~ep~~~~~~~il-~~~~~~~e~  202 (387)
T d1qvra2         180 YVDEPTVEETISIL-RGLKEKYEV  202 (387)
T ss_dssp             EECCCCHHHHHHHH-HHHHHHHHH
T ss_pred             cCCCCcHHHHHHHH-HHHHHHHHh
Confidence            46677767766664 456666554


No 9  
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.38  E-value=66  Score=25.84  Aligned_cols=32  Identities=16%  Similarity=0.153  Sum_probs=15.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          211 SEADFLKEKLKIEEEERKLEAAIEETEKQNAE  242 (442)
Q Consensus       211 s~e~l~~El~~LE~EE~~L~~eLeeLEkE~~~  242 (442)
                      +++.-.+.+.+|++|.....+++++.-++.+.
T Consensus        85 see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~  116 (129)
T d1ykhb1          85 SAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEK  116 (129)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455555555555555555444444333


No 10 
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=45.59  E-value=35  Score=31.99  Aligned_cols=13  Identities=8%  Similarity=0.230  Sum_probs=6.0

Q ss_pred             cccCCcceEEeec
Q 013502           24 CQNCRHFLCIVGV   36 (442)
Q Consensus        24 Cq~C~~~l~i~g~   36 (442)
                      |-.=++.-.+||.
T Consensus        39 ~r~~k~n~llvG~   51 (387)
T d1qvra2          39 LRRTKNNPVLIGE   51 (387)
T ss_dssp             HCSSCCCCEEEEC
T ss_pred             hcCCCCCCeEECC
Confidence            4333444455554


No 11 
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=44.99  E-value=59  Score=24.66  Aligned_cols=67  Identities=10%  Similarity=0.160  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          217 KEKLKIEEEERKLEAAIEETEKQNAEVNAELKELELKSKRFKELEERYWQEFNNFQFQLIAHQEERDAISSKI  289 (442)
Q Consensus       217 ~El~~LE~EE~~L~~eLeeLEkE~~~l~~El~~le~e~~~L~eeEe~~W~e~N~~q~qL~~~~eE~~sl~~q~  289 (442)
                      .++.++.++-+.+..+++++..++-.+..++.....+.      -...-.+...+.-++..++.+...++.++
T Consensus        28 d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~------~~~l~~~~k~lk~~i~~le~~~~~~~~~l   94 (110)
T d1seta1          28 EALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEE------KEALIARGKALGEEAKRLEEALREKEARL   94 (110)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45666778888888888888888888887775432211      11233444444444444444444444443


No 12 
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.16  E-value=17  Score=26.16  Aligned_cols=26  Identities=23%  Similarity=0.405  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013502          178 SDKLDKEVDDVTRDIEAYEACLQRLE  203 (442)
Q Consensus       178 le~Ld~qle~~~~E~d~Y~~fL~~Le  203 (442)
                      +..|+..++.+++|||-|-.-|+.++
T Consensus        10 i~elk~~v~~lEkERdFYF~KLRdIE   35 (59)
T d1wu9a1          10 VNVLKLTVEDLEKERDFYFGKLRNIE   35 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45688899999999999999888776


No 13 
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=36.61  E-value=41  Score=23.60  Aligned_cols=21  Identities=19%  Similarity=0.151  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 013502          224 EEERKLEAAIEETEKQNAEVN  244 (442)
Q Consensus       224 ~EE~~L~~eLeeLEkE~~~l~  244 (442)
                      .|..+|.++|+.++++...+.
T Consensus         4 ~E~~RL~K~l~kl~~~i~~~~   24 (66)
T d1ivsa1           4 EWRRRQEKRLKELLALAERSQ   24 (66)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            334444444444444443333


No 14 
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.28  E-value=41  Score=26.16  Aligned_cols=21  Identities=10%  Similarity=-0.021  Sum_probs=8.8

Q ss_pred             HhhcccCCCceeeeecCCeee
Q 013502          299 LKRTNVLNDAFPIWHDGEFGT  319 (442)
Q Consensus       299 LrktNV~Nd~F~I~hdG~fGT  319 (442)
                      +++.-.|.+---|---.|-||
T Consensus        51 i~~i~~f~~~tviaIkAP~gT   71 (101)
T d2azeb1          51 LRSIADPAEQMVMVIKAPPET   71 (101)
T ss_dssp             HHTTSCTTTEEEEEEECCTTC
T ss_pred             HhhCCCcccceEEEEECCCCC
Confidence            344434444334444444433


No 15 
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.58  E-value=58  Score=23.88  Aligned_cols=30  Identities=23%  Similarity=0.402  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          220 LKIEEEERKLEAAIEETEKQNAEVNAELKE  249 (442)
Q Consensus       220 ~~LE~EE~~L~~eLeeLEkE~~~l~~El~~  249 (442)
                      ..|+.+...|..+++.+.++.+.+..++..
T Consensus        55 ~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~   84 (88)
T d1nkpa_          55 LSVQAEEQKLISEEDLLRKRREQLKHKLEQ   84 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345555555555555555555555554443


No 16 
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=25.85  E-value=99  Score=21.44  Aligned_cols=22  Identities=9%  Similarity=0.074  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Q 013502          182 DKEVDDVTRDIEAYEACLQRLE  203 (442)
Q Consensus       182 d~qle~~~~E~d~Y~~fL~~Le  203 (442)
                      +.+...++++.+.+...+.+++
T Consensus         3 ~~E~~RL~K~l~kl~~~i~~~~   24 (66)
T d1ivsa1           3 EEWRRRQEKRLKELLALAERSQ   24 (66)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555555555555555444


No 17 
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.03  E-value=1.6e+02  Score=23.25  Aligned_cols=25  Identities=12%  Similarity=0.126  Sum_probs=17.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc
Q 013502          279 QEERDAISSKIEVSQAHLELLKRTN  303 (442)
Q Consensus       279 ~eE~~sl~~q~~~~q~qLdkLrktN  303 (442)
                      ..+++.....|+.+...++++++.+
T Consensus       110 ~kkr~~~~~dyd~~~~~l~k~~~k~  134 (217)
T d1urua_         110 VEKRNRKLIDYDGQRHSFQNLQANA  134 (217)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4455666677888888888887653


No 18 
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.57  E-value=1.6e+02  Score=22.54  Aligned_cols=32  Identities=22%  Similarity=0.127  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          268 FNNFQFQLIAHQEERDAISSKIEVSQAHLELL  299 (442)
Q Consensus       268 ~N~~q~qL~~~~eE~~sl~~q~~~~q~qLdkL  299 (442)
                      ...++..+..+.++...+..++.....++++|
T Consensus        97 i~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l  128 (133)
T d1fxkc_          97 KNELESTLQKMGENLRAITDIMMKLSPQAEEL  128 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455555555556666666666555554


No 19 
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.89  E-value=46  Score=24.18  Aligned_cols=28  Identities=14%  Similarity=0.360  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 013502          221 KIEEEERKLEAAIEETEKQNAEVNAELK  248 (442)
Q Consensus       221 ~LE~EE~~L~~eLeeLEkE~~~l~~El~  248 (442)
                      .|..++..|..+++.+.++.+.+..++.
T Consensus        51 ~L~~~~~~l~~~~~~l~~~~~~L~~~l~   78 (83)
T d1nkpb_          51 YMRRKNHTHQQDIDDLKRQNALLEQQVR   78 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455555666666666555555555544


No 20 
>d2inca1 a.25.1.2 (A:2-492) Toluene, o-xylene monooxygenase oxygenase subunit TouA {Pseudomonas stutzeri [TaxId: 316]}
Probab=21.40  E-value=17  Score=35.81  Aligned_cols=21  Identities=24%  Similarity=0.599  Sum_probs=17.5

Q ss_pred             cccCCCCCceecccCCcceEEe
Q 013502           13 LSVDPNVPRWVCQNCRHFLCIV   34 (442)
Q Consensus        13 ~~~~~~~~~~~Cq~C~~~l~i~   34 (442)
                      ....+.+|. .||.|+.|++++
T Consensus       386 ~~~~~~lp~-~C~~cq~P~~~~  406 (491)
T d2inca1         386 LTVPETLPT-ICNMCNLPIAHT  406 (491)
T ss_dssp             GGSCSSCBC-BCTTTCSBCBCC
T ss_pred             cccCCCCCC-ccccCCCCcccC
Confidence            346678888 999999999986


No 21 
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.35  E-value=1.9e+02  Score=24.70  Aligned_cols=23  Identities=17%  Similarity=0.344  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 013502          224 EEERKLEAAIEETEKQNAEVNAE  246 (442)
Q Consensus       224 ~EE~~L~~eLeeLEkE~~~l~~E  246 (442)
                      .+.++..++|+.++.+...++++
T Consensus        26 ~~~~~~i~~L~~iQ~e~~~l~~e   48 (222)
T d2e50a1          26 KEQQEAIEHIDEVQNEIDRLNEQ   48 (222)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455555555555555443


No 22 
>d2cupa3 g.39.1.3 (A:8-34) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.15  E-value=16  Score=22.40  Aligned_cols=14  Identities=43%  Similarity=0.909  Sum_probs=10.7

Q ss_pred             cccCCcceEEeeccccc
Q 013502           24 CQNCRHFLCIVGVDSYA   40 (442)
Q Consensus        24 Cq~C~~~l~i~g~d~~~   40 (442)
                      |-.|+.|+   |+|+-.
T Consensus         1 c~ecrkpi---gad~ke   14 (27)
T d2cupa3           1 CVECRKPI---GADSKE   14 (27)
T ss_dssp             CSSSCCBC---CSSSCE
T ss_pred             CccccCCc---CcchHH
Confidence            88999995   668753


Done!