BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013504
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 172/305 (56%), Gaps = 19/305 (6%)
Query: 82 SNLRVFTFSELKTATKNFS-RSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGL 140
L+ F+ EL+ A+ NFS ++++ + T +AVK+L
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL-------VAVKRLKEERX 75
Query: 141 QGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSR-- 197
QG + ++ TEV ++ + H NL++L G+C ER LL+Y YM N SV L R
Sbjct: 76 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPE 131
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257
Q L W R +IA +ARGLAYLH+ D +II RD K++NILLDE++ A + DFGLA+L
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Query: 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
HV AV GTIG+ APEY+ TG+ + K+D++ +GV L ELITG+R D R +
Sbjct: 192 MDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
Query: 318 EQK--LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSE 375
+ LL+WV+ L + KK ++D L+G Y + ++L VA C RPKMSE
Sbjct: 251 DDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSE 309
Query: 376 VVEVL 380
VV +L
Sbjct: 310 VVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 153/256 (59%), Gaps = 11/256 (4%)
Query: 130 IAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK+L QG + ++ TEV ++ + H NL++L G+C ER LL+Y YM N
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANG 112
Query: 189 SVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
SV L R Q L W R +IA +ARGLAYLH+ D +II RD K++NILLDE++
Sbjct: 113 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITG 306
A + DFGLA+L HV AV G IG+ APEY+ TG+ + K+D++ +GV L ELITG
Sbjct: 173 AVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 307 RRPLDRNRPKSEQK--LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLA 364
+R D R ++ LL+WV+ L + KK ++D L+G Y + ++L VA C
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 290
Query: 365 RQAKGRPKMSEVVEVL 380
RPKMSEVV +L
Sbjct: 291 SSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 24/293 (8%)
Query: 91 ELKTATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEV 150
+L+ AT NF +I V+R D K +A+K+ + QG +E+ TE+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR---DGAK---VALKRRTPESSQGIEEFETEI 86
Query: 151 NVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLP-----WN 205
L HP+LV LIG+C E +E +LIY+YM N +++ HL + + LP W
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEM----ILIYKYMENGNLKRHL---YGSDLPTMSMSWE 139
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265
RL+I AARGL YLH II RD KS NILLDE + K++DFG+++ G G +H
Sbjct: 140 QRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTH 196
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW- 324
+ V GT+GY PEY GRLT KSD++SFGV L+E++ R + ++ P+ L EW
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
Query: 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
V H + + I+DP L K + +K A KCLA ++ RP M +V+
Sbjct: 257 VESH--NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 160/293 (54%), Gaps = 24/293 (8%)
Query: 91 ELKTATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEV 150
+L+ AT NF +I V+R D K +A+K+ + QG +E+ TE+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR---DGAK---VALKRRTPESSQGIEEFETEI 86
Query: 151 NVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLP-----WN 205
L HP+LV LIG+C E +E +LIY+YM N +++ HL + + LP W
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEM----ILIYKYMENGNLKRHL---YGSDLPTMSMSWE 139
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265
RL+I AARGL YLH II RD KS NILLDE + K++DFG+++ G +H
Sbjct: 140 QRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW- 324
+ V GT+GY PEY GRLT KSD++SFGV L+E++ R + ++ P+ L EW
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
Query: 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
V H + + I+DP L K + +K A KCLA ++ RP M +V+
Sbjct: 257 VESH--NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 165/309 (53%), Gaps = 31/309 (10%)
Query: 87 FTFSELKTATKNFS-RSLMIXXXXXXXXXXXVI-----RSTEDSHKK----IDIAVKQLS 136
F+F ELK T NF R + + V+ +T + KK +DI ++L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 137 RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS 196
+ ++ E+ V+ +H NLV+L+G+ ++ D+ L+Y YMPN S+ D L S
Sbjct: 75 Q-------QFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRL-S 122
Query: 197 RFQATLP--WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254
T P W+ R KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGL 179
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
AR + + + +VGT Y APE ++ G +T KSDI+SFGV L E+ITG +D +R
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374
Q LL+ + K +D K+ S + + + +VA++CL + RP +
Sbjct: 239 --EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIK 295
Query: 375 EVVEVLNKI 383
+V ++L ++
Sbjct: 296 KVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 164/309 (53%), Gaps = 31/309 (10%)
Query: 87 FTFSELKTATKNFS-RSLMIXXXXXXXXXXXVI-----RSTEDSHKK----IDIAVKQLS 136
F+F ELK T NF R + + V+ +T + KK +DI ++L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 137 RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS 196
+ ++ E+ V+ +H NLV+L+G+ ++ D+ L+Y YMPN S+ D L S
Sbjct: 75 Q-------QFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRL-S 122
Query: 197 RFQATLP--WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254
T P W+ R KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGL 179
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
AR + + +VGT Y APE ++ G +T KSDI+SFGV L E+ITG +D +R
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374
Q LL+ + K +D K+ S + + + +VA++CL + RP +
Sbjct: 239 --EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIK 295
Query: 375 EVVEVLNKI 383
+V ++L ++
Sbjct: 296 KVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 163/309 (52%), Gaps = 31/309 (10%)
Query: 87 FTFSELKTATKNFS-RSLMIXXXXXXXXXXXVI-----RSTEDSHKK----IDIAVKQLS 136
F+F ELK T NF R + + V+ +T + KK +DI ++L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 137 RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS 196
+ ++ E+ V+ +H NLV+L+G+ ++ D+ L+Y YMPN S+ D L S
Sbjct: 69 Q-------QFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRL-S 116
Query: 197 RFQATLP--WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254
T P W+ R KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGL
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGL 173
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
AR + +VGT Y APE ++ G +T KSDI+SFGV L E+ITG +D +R
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
Query: 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374
Q LL+ + K +D K+ S + + + +VA++CL + RP +
Sbjct: 233 --EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIK 289
Query: 375 EVVEVLNKI 383
+V ++L ++
Sbjct: 290 KVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 159/308 (51%), Gaps = 31/308 (10%)
Query: 87 FTFSELKTATKNFS-RSLMIXXXXXXXXXXXVI-----RSTEDSHKK----IDIAVKQLS 136
F+F ELK T NF R + + V+ +T + KK +DI ++L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 137 RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS 196
+ ++ E+ V +H NLV+L+G+ ++ D+ L+Y Y PN S+ D L S
Sbjct: 66 Q-------QFDQEIKVXAKCQHENLVELLGFSSDGDDL----CLVYVYXPNGSLLDRL-S 113
Query: 197 RFQATLP--WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254
T P W+ R KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGL
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 170
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
AR + +VGT Y APE ++ G +T KSDI+SFGV L E+ITG +D +R
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
Query: 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374
Q LL+ + K +D K S + + +VA++CL + RP +
Sbjct: 230 --EPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSV-EAXYSVASQCLHEKKNKRPDIK 286
Query: 375 EVVEVLNK 382
+V ++L +
Sbjct: 287 KVQQLLQE 294
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 31/262 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K + R G ++++ E V+ + HP LV+L G C E L++E+M +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----APICLVFEFMEHGC 88
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D+L ++ + T L + D G+AYL E +I RD + N L+ E K+
Sbjct: 89 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 144
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
SDFG+ R D + ST + +A+PE R + KSD+WSFGV ++E+ + G+
Sbjct: 145 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368
P + NR SE + D + P+L + + + N C + +
Sbjct: 204 PYE-NRSNSEV---------VEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPE 246
Query: 369 GRPKMSEVVEVLNKIVDAAETG 390
RP S +L ++ + AE+G
Sbjct: 247 DRPAFS---RLLRQLAEIAESG 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 31/262 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K + R G ++++ E V+ + HP LV+L G C E L++E+M +
Sbjct: 32 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----APICLVFEFMEHGC 86
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D+L ++ + T L + D G+AYL E +I RD + N L+ E K+
Sbjct: 87 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 142
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
SDFG+ R D + ST + +A+PE R + KSD+WSFGV ++E+ + G+
Sbjct: 143 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368
P + NR SE + D + P+L + + + N C + +
Sbjct: 202 PYE-NRSNSEV---------VEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPE 244
Query: 369 GRPKMSEVVEVLNKIVDAAETG 390
RP S +L ++ + AE+G
Sbjct: 245 DRPAFS---RLLRQLAEIAESG 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 31/262 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K + R G ++++ E V+ + HP LV+L G C E L++E+M +
Sbjct: 37 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----APICLVFEFMEHGC 91
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D+L ++ + T L + D G+AYL E +I RD + N L+ E K+
Sbjct: 92 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 147
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
SDFG+ R D + ST + +A+PE R + KSD+WSFGV ++E+ + G+
Sbjct: 148 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368
P + NR SE + D + P+L + + + N C + +
Sbjct: 207 PYE-NRSNSEV---------VEDISTGFRLYKPRLASTHVYQ-------IMNHCWRERPE 249
Query: 369 GRPKMSEVVEVLNKIVDAAETG 390
RP S +L ++ + AE+G
Sbjct: 250 DRPAFS---RLLRQLAEIAESG 268
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 28/255 (10%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K + R G ++++ E V+ + HP LV+L G C E L++E+M +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----APICLVFEFMEHGC 88
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D+L ++ + T L + D G+AYL E +I RD + N L+ E K+
Sbjct: 89 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKV 144
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
SDFG+ R D + ST + +A+PE R + KSD+WSFGV ++E+ + G+
Sbjct: 145 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368
P + NR SE + D + P+L + + + N C + +
Sbjct: 204 PYE-NRSNSEV---------VEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPE 246
Query: 369 GRPKMSEVVEVLNKI 383
RP S ++ L I
Sbjct: 247 DRPAFSRLLRQLAAI 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 31/262 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K + R G ++++ E V+ + HP LV+L G C E L+ E+M +
Sbjct: 35 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ----APICLVTEFMEHGC 89
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D+L ++ + T L + D G+AYL E +I RD + N L+ E K+
Sbjct: 90 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 145
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
SDFG+ R D + ST + +A+PE R + KSD+WSFGV ++E+ + G+
Sbjct: 146 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368
P + NR SE + D + P+L + + + N C + +
Sbjct: 205 PYE-NRSNSEV---------VEDISTGFRLYKPRLASTHVYQ-------IMNHCWRERPE 247
Query: 369 GRPKMSEVVEVLNKIVDAAETG 390
RP S +L ++ + AE+G
Sbjct: 248 DRPAFS---RLLRQLAEIAESG 266
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 31/262 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K + + G +++ E V+ + HP LV+L G C E L++E+M +
Sbjct: 54 VAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ----APICLVFEFMEHGC 108
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D+L ++ + T L + D G+AYL E +I RD + N L+ E K+
Sbjct: 109 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 164
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
SDFG+ R D + ST + +A+PE R + KSD+WSFGV ++E+ + G+
Sbjct: 165 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368
P + NR SE + D + P+L + + + N C + +
Sbjct: 224 PYE-NRSNSEV---------VEDISTGFRLYKPRLASTHVYQ-------IMNHCWKERPE 266
Query: 369 GRPKMSEVVEVLNKIVDAAETG 390
RP S +L ++ + AE+G
Sbjct: 267 DRPAFS---RLLRQLAEIAESG 285
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 26/262 (9%)
Query: 129 DIAVKQLSRRGLQGHK--EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
D+AVK L + + E++ EV ++ + HPN+V +G + I + EY+
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI----VTEYLS 117
Query: 187 NRSVQDHL-TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
S+ L S + L RL +A D A+G+ YLH + I+ R+ KS N+L+D+++
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKY 176
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
K+ DFGL+RL S LS S A GT + APE ++ KSD++SFGV L+EL T
Sbjct: 177 TVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Query: 306 GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLAR 365
++P P + A F +LE L ++AA+ C
Sbjct: 235 LQQPWGNLNPA-----------QVVAAVGFKC---KRLE--IPRNLNPQVAAIIEGCWTN 278
Query: 366 QAKGRPKMSEVVEVLNKIVDAA 387
+ RP + ++++L ++ +A
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSA 300
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 26/262 (9%)
Query: 129 DIAVKQLSRRGLQGHK--EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
D+AVK L + + E++ EV ++ + HPN+V +G + I + EY+
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI----VTEYLS 117
Query: 187 NRSVQDHL-TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
S+ L S + L RL +A D A+G+ YLH + I+ RD KS N+L+D+++
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKY 176
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
K+ DFGL+RL S L S GT + APE ++ KSD++SFGV L+EL T
Sbjct: 177 TVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Query: 306 GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLAR 365
++P P + A F +LE L ++AA+ C
Sbjct: 235 LQQPWGNLNPA-----------QVVAAVGFKC---KRLE--IPRNLNPQVAAIIEGCWTN 278
Query: 366 QAKGRPKMSEVVEVLNKIVDAA 387
+ RP + ++++L ++ +A
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSA 300
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 12/179 (6%)
Query: 130 IAVKQL-SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L + G Q W E+++L + H +++K G C + E+ +Q L+ EY+P
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQ--LVMEYVPLG 103
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++D+L + ++ L AQ G+AYLH I R+ + N+LLD K
Sbjct: 104 SLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVK 157
Query: 249 LSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGLA+ P +G + G + + APE ++ + Y SD+WSFGV LYEL+T
Sbjct: 158 IGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 12/179 (6%)
Query: 130 IAVKQL-SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L + G Q W E+++L + H +++K G C + E+ +Q L+ EY+P
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQ--LVMEYVPLG 103
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++D+L + ++ L AQ G+AYLH I R+ + N+LLD K
Sbjct: 104 SLRDYLP---RHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVK 157
Query: 249 LSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGLA+ P +G + G + + APE ++ + Y SD+WSFGV LYEL+T
Sbjct: 158 IGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 28 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 82
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 83 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 135
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFL 300
Q K+SDFGL+R D T+ VG+ + ++ PE + + + KSDIW+FGV +
Sbjct: 136 QGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 191
Query: 301 YELIT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+E+ + G+ P +R N +E + L RPHL K +T++
Sbjct: 192 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 234
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 32 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 86
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 87 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 139
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFL 300
Q K+SDFGL+R D T+ VG+ + ++ PE + + + KSDIW+FGV +
Sbjct: 140 QGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 195
Query: 301 YELIT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+E+ + G+ P +R N +E + L RPHL K +T++
Sbjct: 196 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 238
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 48 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 102
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 103 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 155
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFL 300
Q K+SDFGL+R D T+ VG+ + ++ PE + + + KSDIW+FGV +
Sbjct: 156 QGVVKVSDFGLSRYVLDDE----ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 301 YELIT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+E+ + G+ P +R N +E + L RPHL K +T++
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL-LIYEYMPNR 188
+ +K+L R + + ++ EV V+ +EHPN++K IG +D +RL I EY+
Sbjct: 38 MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-----KRLNFITEYIKGG 92
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
+++ + S + PW+ R+ A+D A G+AYLH II RD S N L+ E N
Sbjct: 93 TLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVV 148
Query: 249 LSDFGLARL-----GPSDGLSHVST-------AVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
++DFGLARL +GL + VVG + APE I K D++SF
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 297 GVFLYELI 304
G+ L E+I
Sbjct: 209 GIVLCEII 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 48 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 102
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 103 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 155
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFL 300
Q K+SDFGL+R D T+ VG+ + ++ PE + + + KSDIW+FGV +
Sbjct: 156 QGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 301 YELIT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+E+ + G+ P +R N +E + L RPHL K +T++
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 33 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 87
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 88 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 140
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFL 300
Q K+SDFGL+R D T+ VG+ + ++ PE + + + KSDIW+FGV +
Sbjct: 141 QGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 301 YELIT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+E+ + G+ P +R N +E + L RPHL K +T++
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 239
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 27/223 (12%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 39 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 93
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 94 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 146
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFL 300
Q K+SDFGL+R D T+ VG+ + ++ PE + + + KSDIW+FGV +
Sbjct: 147 QGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 202
Query: 301 YELIT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+E+ + G+ P +R N +E + L RPHL K +T++
Sbjct: 203 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 245
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 130 IAVKQLSRR-GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L G Q W E+ +L + H ++VK G C + E+ +Q L+ EY+P
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLG 98
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++D+L + + L AQ G+AYLH I R + N+LLD K
Sbjct: 99 SLRDYLP---RHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVK 152
Query: 249 LSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGLA+ P +G + G + + APE ++ + Y SD+WSFGV LYEL+T
Sbjct: 153 IGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 130 IAVKQLSRR-GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L G Q W E+ +L + H ++VK G C + E+ +Q L+ EY+P
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLG 97
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++D+L + + L AQ G+AYLH I R + N+LLD K
Sbjct: 98 SLRDYLP---RHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVK 151
Query: 249 LSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGLA+ P +G + G + + APE ++ + Y SD+WSFGV LYEL+T
Sbjct: 152 IGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 30 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-----PIYIIT 81
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 82 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 138
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL + + A I + APE I G T KSD+WSFG+ L E
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 197
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 198 IVTHGRIP 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 36 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 87
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 88 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 144
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 145 DTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 204 IVTHGRIP 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 35 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 86
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 143
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 144 DTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 203 IVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 35 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-----PIYIIT 86
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 143
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 144 DTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 203 IVTHGRIP 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 43 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 94
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 95 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 151
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 152 DTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 211 IVTHGRIP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 37 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-----PIYIIT 88
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 89 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 145
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 146 DTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 205 IVTHGRIP 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 41 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 92
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 149
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 150 DTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 209 IVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 44 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 95
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 96 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 152
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 153 DTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 212 IVTHGRIP 219
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 41 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 92
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 149
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL + + A I + APE I G T KSD+WSFG+ L E
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 209 IVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 40 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 91
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 92 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 148
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL + + A I + APE I G T KSD+WSFG+ L E
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 208 IVTHGRIP 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 35 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 86
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 143
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL D I + APE I G T KSD+WSFG+ L E
Sbjct: 144 DTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 203 IVTHGRIP 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+A+K + + G E++ E V+ + H LV+L G C + +R I +I EYM
Sbjct: 33 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPI--FIITEYMA 87
Query: 187 NRSVQDHLTS---RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++L RFQ L++ +D + YL Q + RD + N L+++
Sbjct: 88 NGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVND 140
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
Q K+SDFGL+R D + S + ++ PE + + + KSDIW+FGV ++E+
Sbjct: 141 QGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
Query: 304 IT-GRRPLDR--NRPKSEQ--KLLEWVRPHLTDAKKFTMI 338
+ G+ P +R N +E + L RPHL K +T++
Sbjct: 200 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 239
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 35 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-----PIYIIT 86
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 143
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL + + A I + APE I G T KSD+WSFG+ L E
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 203 IVTHGRIP 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 45 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 96
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I RD +++NIL+
Sbjct: 97 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS 153
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL + + A I + APE I G T KSD+WSFG+ L E
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 213 IVTHGRIP 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 130 IAVKQL-SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L + G Q W E+++L + H +++K G C + +Q L+ EY+P
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ--LVMEYVPLG 120
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++D+L ++ L AQ G+AYLH I RD + N+LLD K
Sbjct: 121 SLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVK 174
Query: 249 LSDFGLARLGPSDGLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGLA+ P + V + + APE ++ + Y SD+WSFGV LYEL+T
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H K+ AVK L ++G ++ E N++ ++H LV+L ++ +I
Sbjct: 31 NGHTKV--AVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-----IYIIT 82
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D L + L N L +A A G+A++ E I R+ +++NIL+
Sbjct: 83 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVS 139
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ + K++DFGLARL + + A I + APE I G T KSD+WSFG+ L E
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 303 LIT-GRRP 309
++T GR P
Sbjct: 199 IVTHGRIP 206
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 20/189 (10%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 87
Query: 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
+ S+ HL + + + IA+ ARG+ YLH II RD KS+NI L E
Sbjct: 88 WCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHE 143
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFL 300
K+ DFGLA + SH + G+I + APE I+ + +++SD+++FG+ L
Sbjct: 144 DNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 203
Query: 301 YELITGRRP 309
YEL+TG+ P
Sbjct: 204 YELMTGQLP 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 35/271 (12%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK L + G + ++ E N++ ++H LV+L Y E I +I EYM S
Sbjct: 40 VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL--YAVVTREEPI--YIITEYMAKGS 94
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L S + + + A G+AY+ I RD +++N+L+ E K+
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKI 151
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLAR+ + + A I + APE I G T KSD+WSFG+ LYE++T G+
Sbjct: 152 ADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKI 210
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD----PKLEGKYSIKLAQKLAAVANKCLA 364
P P T+A T + P++E +L + C
Sbjct: 211 PY----------------PGRTNADVMTALSQGYRMPRVE-----NCPDELYDIMKMCWK 249
Query: 365 RQAKGRPKMSEVVEVLNKIVDAAETGTPQTP 395
+A+ RP + VL+ A E Q P
Sbjct: 250 EKAEERPTFDYLQSVLDDFYTATEGQYQQQP 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 99
Query: 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
+ S+ HL + + + IA+ ARG+ YLH II RD KS+NI L E
Sbjct: 100 WCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHE 155
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFL 300
K+ DFGLA SH + G+I + APE I+ + +++SD+++FG+ L
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 301 YELITGRRP 309
YEL+TG+ P
Sbjct: 216 YELMTGQLP 224
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ D+AVK + + G E+ E + + HP LVK G C+++ ++ EY+
Sbjct: 32 QYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE----YPIYIVTEYIS 86
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
N + ++L S + P + L++ D G+A+L Q I RD + N L+D
Sbjct: 87 NGCLLNYLRSHGKGLEP-SQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLC 142
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
K+SDFG+ R D +VS+ VGT + ++APE + + KSD+W+FG+ ++E+
Sbjct: 143 VKVSDFGMTRYVLDD--QYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 304 IT-GRRPLD 311
+ G+ P D
Sbjct: 199 FSLGKMPYD 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 40/280 (14%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
V +T + H K+ AVK + + G + ++ E NV+ ++H LVKL ++
Sbjct: 198 VWMATYNKHTKV--AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE----- 249
Query: 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236
+I E+M S+ D L S + P + + A G+A++ + I RD ++
Sbjct: 250 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRA 306
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
+NIL+ K++DFGLAR+G I + APE I G T KSD+WSF
Sbjct: 307 ANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 297 GVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKL 355
G+ L E++T GR P + LE + + M P+ E ++L
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIRALE---------RGYRM---PRPEN-----CPEEL 398
Query: 356 AAVANKCLARQAKGRPKMSEVVEVLNKIVDAAETGTPQTP 395
+ +C + + RP + VL+ A E+ Q P
Sbjct: 399 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQP 438
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 99 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 154
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 16/170 (9%)
Query: 146 WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWN 205
++ E +V+ + H NLV+L+G E E+G ++ EYM S+ D+L SR ++ L +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 102
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265
LK + D + YL EG +F + RD + N+L+ E AK+SDFGL +
Sbjct: 103 CLLKFSLDVCEAMEYL-EGNNF--VHRDLAARNVLVSEDNVAKVSDFGLTK-------EA 152
Query: 266 VSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDR 312
ST G + + APE ++ + + KSD+WSFG+ L+E+ + GR P R
Sbjct: 153 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 16/170 (9%)
Query: 146 WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWN 205
++ E +V+ + H NLV+L+G E E+G ++ EYM S+ D+L SR ++ L +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 117
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265
LK + D + YL EG +F + RD + N+L+ E AK+SDFGL +
Sbjct: 118 CLLKFSLDVCEAMEYL-EGNNF--VHRDLAARNVLVSEDNVAKVSDFGLTK-------EA 167
Query: 266 VSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDR 312
ST G + + APE ++ + + KSD+WSFG+ L+E+ + GR P R
Sbjct: 168 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 104
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 105 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 160
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 102
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 103 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 99
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 100 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 155
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 99
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 100 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 155
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 103
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 104 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 159
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 105
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 106 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 161
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 130
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 131 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 186
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 20/189 (10%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY Q ++ +
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTAP-----QLAIVTQ 99
Query: 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
+ S+ HL + + + IA+ ARG+ YLH II RD KS+NI L E
Sbjct: 100 WCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHE 155
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFL 300
K+ DFGLA SH + G+I + APE I+ + +++SD+++FG+ L
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 301 YELITGRRP 309
YEL+TG+ P
Sbjct: 216 YELMTGQLP 224
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 106
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 107 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 162
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 97
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 98 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 153
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 16/170 (9%)
Query: 146 WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWN 205
++ E +V+ + H NLV+L+G E E+G ++ EYM S+ D+L SR ++ L +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGD 289
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265
LK + D + YL EG +F + RD + N+L+ E AK+SDFGL +
Sbjct: 290 CLLKFSLDVCEAMEYL-EGNNF--VHRDLAARNVLVSEDNVAKVSDFGLTK-------EA 339
Query: 266 VSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDR 312
ST G + + APE ++ + + KSD+WSFG+ L+E+ + GR P R
Sbjct: 340 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 99
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 100 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 155
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 117
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 118 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 173
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 16/172 (9%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLP 203
+ ++ E +V+ + H NLV+L+G E E+G ++ EYM S+ D+L SR ++ L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLG 106
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
+ LK + D + YL EG +F + RD + N+L+ E AK+SDFGL +
Sbjct: 107 GDCLLKFSLDVCEAMEYL-EGNNF--VHRDLAARNVLVSEDNVAKVSDFGLTK------- 156
Query: 264 SHVSTAVVG--TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDR 312
ST G + + APE ++ + KSD+WSFG+ L+E+ + GR P R
Sbjct: 157 EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 102
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 103 LRDYLQAHAE-RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 117
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 118 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 173
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 85
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 86 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 138
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 198
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 199 IVLYELMTGQLP 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 88
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 89 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 141
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 202 IVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 110
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 111 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 163
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 224 IVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 111
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 112 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 164
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 165 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 225 IVLYELMTGQLP 236
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 88
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 89 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 141
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 202 IVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 83
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 84 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 136
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 197 IVLYELMTGQLP 208
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 127 KIDIAVKQLSRR-GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL----I 181
KI +A+K L+ G + + E++ E ++ ++HP+LV+L+G C + + +L+ +
Sbjct: 44 KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCL 103
Query: 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL 241
EY+ +D++ S Q L W ++ A+G+ YL E +++ RD + N+L+
Sbjct: 104 LEYVHEH--KDNIGS--QLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVLV 150
Query: 242 DEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
+ K++DFGLARL D + + I + A E I + T++SD+WS+GV ++
Sbjct: 151 KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIW 210
Query: 302 ELIT-GRRPLDRNRPKSEQKLLE 323
EL+T G +P D + LLE
Sbjct: 211 ELMTFGGKPYDGIPTREIPDLLE 233
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI EY+P S
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGS 100
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D+L + + + L+ +G+ YL + I R+ + NIL++ + K+
Sbjct: 101 LRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENRVKI 156
Query: 250 SDFGLARLGPSDGLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D + V I + APE + + + SD+WSFGV LYEL T
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY Q ++ +
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTAP-----QLAIVTQ 83
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 84 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 136
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA + SH + G+I + APE I+ +++SD+++FG
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 197 IVLYELMTGQLP 208
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 108/204 (52%), Gaps = 21/204 (10%)
Query: 127 KIDIAVKQLSRR-GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
KI +A+K L+ G + + E++ E ++ ++HP+LV+L+G C IQ L+ + M
Sbjct: 67 KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT---IQ--LVTQLM 121
Query: 186 PNRSVQDHLTSR-----FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
P+ + +++ Q L W ++ A+G+ YL E +++ RD + N+L
Sbjct: 122 PHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEER---RLVHRDLAARNVL 172
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFL 300
+ + K++DFGLARL D + + I + A E I + T++SD+WS+GV +
Sbjct: 173 VKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 232
Query: 301 YELIT-GRRPLDRNRPKSEQKLLE 323
+EL+T G +P D + LLE
Sbjct: 233 WELMTFGGKPYDGIPTREIPDLLE 256
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 30/280 (10%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
V +T + H K+ AVK + + G + ++ E NV+ ++H LVKL ++
Sbjct: 204 VWMATYNKHTKV--AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE----- 255
Query: 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236
+I E+M S+ D L S + P + + A G+A++ + I RD ++
Sbjct: 256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRA 312
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
+NIL+ K++DFGLAR+ + + A I + APE I G T KSD+WSF
Sbjct: 313 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSF 371
Query: 297 GVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKL 355
G+ L E++T GR P + LE + + M P+ E ++L
Sbjct: 372 GILLMEIVTYGRIPYPGMSNPEVIRALE---------RGYRM---PRPE-----NCPEEL 414
Query: 356 AAVANKCLARQAKGRPKMSEVVEVLNKIVDAAETGTPQTP 395
+ +C + + RP + VL+ A E+ + P
Sbjct: 415 YNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEEIP 454
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 37 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 91
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 148
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 149 KVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 307 RRPLDRNRPKSEQKLLE 323
P P +LLE
Sbjct: 208 MSPYPGIDPSQVYELLE 224
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 103
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 104 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 156
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA SH + G+I + APE I+ +++SD+++FG
Sbjct: 157 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 216
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 217 IVLYELMTGQLP 228
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 35/271 (12%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK L + G + ++ E N++ ++H LV+L Y E I +I E+M S
Sbjct: 39 VAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL--YAVVTKEEPI--YIITEFMAKGS 93
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L S + + + A G+AY+ I RD +++N+L+ E K+
Sbjct: 94 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKI 150
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLAR+ + + A I + APE I G T KS++WSFG+ LYE++T G+
Sbjct: 151 ADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKI 209
Query: 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD----PKLEGKYSIKLAQKLAAVANKCLA 364
P P T+A + + P++E +L + C
Sbjct: 210 PY----------------PGRTNADVMSALSQGYRMPRME-----NCPDELYDIMKMCWK 248
Query: 365 RQAKGRPKMSEVVEVLNKIVDAAETGTPQTP 395
+A+ RP + VL+ A E Q P
Sbjct: 249 EKAEERPTFDYLQSVLDDFYTATEGQYQQQP 279
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 37 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 91
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 148
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 149 KVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
Query: 305 T-GRRPLDRNRPKSEQKLLE 323
T G P P +LLE
Sbjct: 205 TYGMSPYPGIDPSQVYELLE 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 34/269 (12%)
Query: 122 EDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
++ KKI AVK L+R G +++TE ++ HPN++ L+G C + L+
Sbjct: 52 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLV 108
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKS 236
+ YM + +++ + + N +K A+G+ YL + + RD +
Sbjct: 109 VLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAA 160
Query: 237 SNILLDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294
N +LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+W
Sbjct: 161 RNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 220
Query: 295 SFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQK 354
SFGV L+EL+T P P + + + +L ++ L+ +Y
Sbjct: 221 SFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDP 264
Query: 355 LAAVANKCLARQAKGRPKMSEVVEVLNKI 383
L V KC +A+ RP SE+V ++ I
Sbjct: 265 LYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGLAR+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
L+ M ++ H+ QA P + A + GL LH +I++RD K NI
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENI 317
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
LLD+ + ++SD GLA P VGT+GY APE ++ R T+ D W+ G
Sbjct: 318 LLDDHGHIRISDLGLAVHVPE---GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 300 LYELITGRRPLDRNRPKSEQKLLE 323
LYE+I G+ P + + K +++ +E
Sbjct: 375 LYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
L+ M ++ H+ QA P + A + GL LH +I++RD K NI
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENI 317
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
LLD+ + ++SD GLA P VGT+GY APE ++ R T+ D W+ G
Sbjct: 318 LLDDHGHIRISDLGLAVHVPE---GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 300 LYELITGRRPLDRNRPKSEQKLLE 323
LYE+I G+ P + + K +++ +E
Sbjct: 375 LYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK+L + +++ E+ +L ++H N+VK G C R ++ LI E++P S
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEFLPYGS 102
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++++L + + + L+ +G+ YL + I RD + NIL++ + K+
Sbjct: 103 LREYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 250 SDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
DFGL ++ P D V I + APE + + + SD+WSFGV LYEL T
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 37 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTY 91
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 92 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 148
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 149 KVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
Query: 305 T-GRRPLDRNRPKSEQKLLE 323
T G P P +LLE
Sbjct: 205 TYGMSPYPGIDPSQVYELLE 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 83
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 84 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 136
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA SH + G+I + APE I+ +++SD+++FG
Sbjct: 137 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 197 IVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 26/192 (13%)
Query: 129 DIAVKQL-----SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
D+AVK L + + LQ K EV VL H N++ +GY + Q ++ +
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFK---NEVGVLRKTRHVNILLFMGYSTKP-----QLAIVTQ 111
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ S+ HL ++F+ + IA+ A+G+ YLH II RD KS+NI
Sbjct: 112 WCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF 164
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFG 297
L E K+ DFGLA SH + G+I + APE I+ +++SD+++FG
Sbjct: 165 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 298 VFLYELITGRRP 309
+ LYEL+TG+ P
Sbjct: 225 IVLYELMTGQLP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 34/269 (12%)
Query: 122 EDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
++ KKI AVK L+R G +++TE ++ HPN++ L+G C + L+
Sbjct: 72 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLV 128
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKS 236
+ YM + +++ + + N +K A+G+ YL + + RD +
Sbjct: 129 VLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAA 180
Query: 237 SNILLDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294
N +LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+W
Sbjct: 181 RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 240
Query: 295 SFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQK 354
SFGV L+EL+T P P + + + +L ++ L+ +Y
Sbjct: 241 SFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDP 284
Query: 355 LAAVANKCLARQAKGRPKMSEVVEVLNKI 383
L V KC +A+ RP SE+V ++ I
Sbjct: 285 LYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 28/266 (10%)
Query: 122 EDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
++ KKI AVK L+R G +++TE ++ HPN++ L+G C + L+
Sbjct: 71 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLV 127
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
+ YM + +++ + R + P L A+G+ YL + + RD + N
Sbjct: 128 VLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNC 182
Query: 240 LLDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFG
Sbjct: 183 MLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 242
Query: 298 VFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
V L+EL+T P P + + + +L ++ L+ +Y L
Sbjct: 243 VLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYE 286
Query: 358 VANKCLARQAKGRPKMSEVVEVLNKI 383
V KC +A+ RP SE+V ++ I
Sbjct: 287 VMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 34/269 (12%)
Query: 122 EDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
++ KKI AVK L+R G +++TE ++ HPN++ L+G C + L+
Sbjct: 45 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLV 101
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKS 236
+ YM + +++ + + N +K A+G+ YL + + RD +
Sbjct: 102 VLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAA 153
Query: 237 SNILLDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294
N +LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+W
Sbjct: 154 RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 213
Query: 295 SFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQK 354
SFGV L+EL+T P P + + + +L ++ L+ +Y
Sbjct: 214 SFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDP 257
Query: 355 LAAVANKCLARQAKGRPKMSEVVEVLNKI 383
L V KC +A+ RP SE+V ++ I
Sbjct: 258 LYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 113
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
M + +++ + + N +K A+G+ YL + + RD + N +
Sbjct: 114 MKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCM 165
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFGV
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358
L+EL+T P P + + + +L ++ L+ +Y L V
Sbjct: 226 LLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEV 269
Query: 359 ANKCLARQAKGRPKMSEVVEVLNKI 383
KC +A+ RP SE+V ++ I
Sbjct: 270 MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 28/262 (10%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 114
Query: 185 MPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + +++ + R + P L A+G+ +L + + RD + N +LDE
Sbjct: 115 MKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDE 169
Query: 244 QWNAKLSDFGLAR--LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
++ K++DFGLAR L H T + + A E +QT + T KSD+WSFGV L+
Sbjct: 170 KFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 302 ELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANK 361
EL+T P P + + + +L ++ L+ +Y L V K
Sbjct: 230 ELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEVMLK 273
Query: 362 CLARQAKGRPKMSEVVEVLNKI 383
C +A+ RP SE+V ++ I
Sbjct: 274 CWHPKAEMRPSFSELVSRISAI 295
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 54 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 110
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
M + +++ + + N +K A+G+ YL + + RD + N +
Sbjct: 111 MKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCM 162
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFGV
Sbjct: 163 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358
L+EL+T P P + + + +L ++ L+ +Y L V
Sbjct: 223 LLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEV 266
Query: 359 ANKCLARQAKGRPKMSEVVEVLNKI 383
KC +A+ RP SE+V ++ I
Sbjct: 267 MLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 13/194 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
V +T + H K+ AVK + + G + ++ E NV+ ++H LVKL ++
Sbjct: 31 VWMATYNKHTKV--AVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEP---- 83
Query: 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236
+I E+M S+ D L S + P + + A G+A++ + I RD ++
Sbjct: 84 -IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRA 139
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
+NIL+ K++DFGLAR+ + + A I + APE I G T KSD+WSF
Sbjct: 140 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSF 198
Query: 297 GVFLYELIT-GRRP 309
G+ L E++T GR P
Sbjct: 199 GILLMEIVTYGRIP 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 113
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
M + +++ + + N +K A+G+ YL + + RD + N +
Sbjct: 114 MKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCM 165
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFGV
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358
L+EL+T P P + + + +L ++ L+ +Y L V
Sbjct: 226 LLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEV 269
Query: 359 ANKCLARQAKGRPKMSEVVEVLNKI 383
KC +A+ RP SE+V ++ I
Sbjct: 270 MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVIEYMSKGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL D I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARL-IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGFVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 28/262 (10%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 111
Query: 185 MPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + +++ + R + P L A+G+ YL + + RD + N +LDE
Sbjct: 112 MKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDE 166
Query: 244 QWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFGV L+
Sbjct: 167 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 302 ELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANK 361
EL+T P P + + + +L ++ L+ +Y L V K
Sbjct: 227 ELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEVMLK 270
Query: 362 CLARQAKGRPKMSEVVEVLNKI 383
C +A+ RP SE+V ++ I
Sbjct: 271 CWHPKAEMRPSFSELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 52 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 108
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
M + +++ + + N +K A+G+ YL + + RD + N +
Sbjct: 109 MKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCM 160
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFGV
Sbjct: 161 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358
L+EL+T P P + + + +L ++ L+ +Y L V
Sbjct: 221 LLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEV 264
Query: 359 ANKCLARQAKGRPKMSEVVEVLNKI 383
KC +A+ RP SE+V ++ I
Sbjct: 265 MLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 56 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 112
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
M + +++ + + N +K A+G+ YL + + RD + N +
Sbjct: 113 MKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCM 164
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LDE++ K++DFGLAR + + S H T + + A E +QT + T KSD+WSFGV
Sbjct: 165 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358
L+EL+T P P + + + +L ++ L+ +Y L V
Sbjct: 225 LLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEV 268
Query: 359 ANKCLARQAKGRPKMSEVVEVLNKI 383
KC +A+ RP SE+V ++ I
Sbjct: 269 MLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 41 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 96
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 97 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 152
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 153 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 213 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 256
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 257 -----CWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVIEYMSKGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVCEYMSKGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
D+A+KQ+ + K ++ E+ L V HPN+VKL G C L+ EY
Sbjct: 34 DVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP------VCLVMEYAEGG 85
Query: 189 SVQDHLTSRFQATLPWNTR---LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
S+ + L LP+ T + ++G+AYLH +I RD K N+LL
Sbjct: 86 SLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 246 NA-KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K+ DFG A D +H+ T G+ + APE + + K D++S+G+ L+E+I
Sbjct: 144 TVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 198
Query: 305 TGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLA 364
T R+P D + + + W + + + +I + L + + ++ +C +
Sbjct: 199 TRRKPFDEIGGPAFRIM--WA---VHNGTRPPLIKN----------LPKPIESLMTRCWS 243
Query: 365 RQAKGRPKMSEVVEVLNKIV 384
+ RP M E+V+++ ++
Sbjct: 244 KDPSQRPSMEEIVKIMTHLM 263
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 58 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 113
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 114 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 169
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 170 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 229
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 230 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 273
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 274 -----CWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 34/260 (13%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
D+A+KQ+ + K ++ E+ L V HPN+VKL G C L+ EY
Sbjct: 33 DVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP------VCLVMEYAEGG 84
Query: 189 SVQDHLTSRFQATLPWNTR---LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
S+ + L LP+ T + ++G+AYLH +I RD K N+LL
Sbjct: 85 SLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 142
Query: 246 NA-KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K+ DFG A D +H+ T G+ + APE + + K D++S+G+ L+E+I
Sbjct: 143 TVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Query: 305 TGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLA 364
T R+P D + + + W + + + +I + L + + ++ +C +
Sbjct: 198 TRRKPFDEIGGPAFRIM--WA---VHNGTRPPLIKN----------LPKPIESLMTRCWS 242
Query: 365 RQAKGRPKMSEVVEVLNKIV 384
+ RP M E+V+++ ++
Sbjct: 243 KDPSQRPSMEEIVKIMTHLM 262
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 294 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 347
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 404
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 405 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 463
Query: 309 P 309
P
Sbjct: 464 P 464
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 30/276 (10%)
Query: 126 KKIDIAVKQL-SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
++I +A+K L S + +++++E +++G +HPN++ L G + ++I E+
Sbjct: 60 REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEF 115
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
M N S+ D + + + + A G+ YL D + RD + NIL++
Sbjct: 116 MENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSN 171
Query: 245 WNAKLSDFGLARLGPSDGLSHVSTAVVG---TIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R D T+ +G I + APE IQ + T SD+WS+G+ ++
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 302 ELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVAN 360
E+++ G RP + + +A + L P ++ L +
Sbjct: 232 EVMSYGERPY-----------WDMTNQDVINAIEQDYRLPPPMD------CPSALHQLML 274
Query: 361 KCLARQAKGRPKMSEVVEVLNKIVDAAETGTPQTPL 396
C + RPK ++V L+K++ + PL
Sbjct: 275 DCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPL 310
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 34 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 87
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 88 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 144
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 145 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 203
Query: 309 P 309
P
Sbjct: 204 P 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 36 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 89
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 90 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 146
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 147 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 205
Query: 309 P 309
P
Sbjct: 206 P 206
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 68 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 123
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 124 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 179
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 180 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 239
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 240 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 283
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 284 -----CWQKDRNNRPKFEQIVSILDKLI 306
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E + +++HPN++ L G C ++ L+ E+ + L+ + +P + +
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEP----NLCLVMEFARGGPLNRVLSGK---RIPPDILV 108
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN--------AKLSDFGLARLGPS 260
A ARG+ YLH+ II RD KSSNIL+ ++ K++DFGLAR
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---- 164
Query: 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+ + G + APE I+ + SD+WS+GV L+EL+TG P
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 264
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 321
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 322 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 309 P 309
P
Sbjct: 381 P 381
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E ++ ++H LV+L +E+ ++ EYM S
Sbjct: 36 VAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP-----IYIVTEYMNKGS 89
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ I RD +S+NIL+ K+
Sbjct: 90 LLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMNY--IHRDLRSANILVGNGLICKI 146
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL D I + APE GR T KSD+WSFG+ L EL+T GR
Sbjct: 147 ADFGLARL-IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
Query: 309 P 309
P
Sbjct: 206 P 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EYM N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 264
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 321
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 322 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 309 P 309
P
Sbjct: 381 P 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 35 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IXIVTEYMSKGS 88
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 89 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 145
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL D I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 146 ADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 204
Query: 309 P 309
P
Sbjct: 205 P 205
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVGEYMSKGS 264
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 321
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 322 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 309 P 309
P
Sbjct: 381 P 381
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 38 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 91
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 92 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 148
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 149 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 207
Query: 309 P 309
P
Sbjct: 208 P 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L H + E+ +L + H N+VK G C ED GI+ LI E++P+
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK--LIMEFLPSG 110
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++++L + + +LK A +G+ YL Q + RD + N+L++ + K
Sbjct: 111 SLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVK 166
Query: 249 LSDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGL + +D V + + APE + + SD+WSFGV L+EL+T
Sbjct: 167 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C + I + EYMP
Sbjct: 58 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYI----VTEYMPY 112
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 113 GNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVV 169
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + KSD+W+FGV L+E+
Sbjct: 170 KVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 225
Query: 305 T-GRRP 309
T G P
Sbjct: 226 TYGMSP 231
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD ++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLAAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVMEYMSKGC 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 37/253 (14%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL-TSRFQATL 202
+++++E +++G +HPN+++L G RG +++ EYM N S+ L T Q T+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD- 261
+ + + G+ YL D + RD + N+L+D K+SDFGL+R+ D
Sbjct: 151 --MQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPL----DRNRPK 316
++ +T I + APE I + SD+WSFGV ++E++ G RP +R+
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS 265
Query: 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV 376
S ++ P ++LD C + RP+ S++
Sbjct: 266 SVEEGYRLPAPMGCPHALHQLMLD---------------------CWHKDRAQRPRFSQI 304
Query: 377 VEVLNKIVDAAET 389
V VL+ ++ + E+
Sbjct: 305 VSVLDALIRSPES 317
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L H + E+ +L + H N+VK G C ED GI+ LI E++P+
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK--LIMEFLPSG 98
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S++++L + + +LK A +G+ YL Q + RD + N+L++ + K
Sbjct: 99 SLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVK 154
Query: 249 LSDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ DFGL + +D V + + APE + + SD+WSFGV L+EL+T
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 28/262 (10%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 113
Query: 185 MPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + +++ + R + P L A+G+ +L + + RD + N +LDE
Sbjct: 114 MKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDE 168
Query: 244 QWNAKLSDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
++ K++DFGLAR H T + + A E +QT + T KSD+WSFGV L+
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 302 ELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANK 361
EL+T P P + + + +L ++ L+ +Y L V K
Sbjct: 229 ELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEVMLK 272
Query: 362 CLARQAKGRPKMSEVVEVLNKI 383
C +A+ RP SE+V ++ I
Sbjct: 273 CWHPKAEMRPSFSELVSRISAI 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 28/262 (10%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 55 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 111
Query: 185 MPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + +++ + R + P L A+G+ +L + + RD + N +LDE
Sbjct: 112 MKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDE 166
Query: 244 QWNAKLSDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
++ K++DFGLAR H T + + A E +QT + T KSD+WSFGV L+
Sbjct: 167 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 302 ELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANK 361
EL+T P P + + + +L ++ L+ +Y L V K
Sbjct: 227 ELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEVMLK 270
Query: 362 CLARQAKGRPKMSEVVEVLNKI 383
C +A+ RP SE+V ++ I
Sbjct: 271 CWHPKAEMRPSFSELVSRISAI 292
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 127 KIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
KI + +K + + G Q + + +G ++H ++V+L+G C G L+ +Y+
Sbjct: 60 KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYL 114
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
P S+ DH+ A P L A+G+ YL E ++ R+ + N+LL
Sbjct: 115 PLGSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPS 170
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+++DFG+A L P D + + I + A E I G+ T++SD+WS+GV ++EL+T
Sbjct: 171 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
Query: 306 -GRRPLDRNRPKSEQKLLE 323
G P R LLE
Sbjct: 231 FGAEPYAGLRLAEVPDLLE 249
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 28/262 (10%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 58 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 114
Query: 185 MPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + +++ + R + P L A+G+ +L + + RD + N +LDE
Sbjct: 115 MKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDE 169
Query: 244 QWNAKLSDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
++ K++DFGLAR H T + + A E +QT + T KSD+WSFGV L+
Sbjct: 170 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 302 ELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANK 361
EL+T P P + + + +L ++ L+ +Y L V K
Sbjct: 230 ELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEVMLK 273
Query: 362 CLARQAKGRPKMSEVVEVLNKI 383
C +A+ RP SE+V ++ I
Sbjct: 274 CWHPKAEMRPSFSELVSRISAI 295
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 28/266 (10%)
Query: 122 EDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
++ KKI AVK L+R G +++TE ++ HPN++ L+G C + L+
Sbjct: 112 DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLV 168
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
+ YM + +++ + R + P L A+G+ +L + + RD + N
Sbjct: 169 VLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNC 223
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+LDE++ K++DFGLAR H T + + A E +QT + T KSD+WSFG
Sbjct: 224 MLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFG 283
Query: 298 VFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
V L+EL+T P P + + + +L ++ L+ +Y L
Sbjct: 284 VLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYE 327
Query: 358 VANKCLARQAKGRPKMSEVVEVLNKI 383
V KC +A+ RP SE+V ++ I
Sbjct: 328 VMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 34/265 (12%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 57 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 113
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLK----IAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
M + +++ + + N +K A+G+ +L + + RD + N +
Sbjct: 114 MKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCM 165
Query: 241 LDEQWNAKLSDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LDE++ K++DFGLAR H T + + A E +QT + T KSD+WSFGV
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358
L+EL+T P P + + + +L ++ L+ +Y L V
Sbjct: 226 LLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEV 269
Query: 359 ANKCLARQAKGRPKMSEVVEVLNKI 383
KC +A+ RP SE+V ++ I
Sbjct: 270 MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 28/262 (10%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
KKI AVK L+R G +++TE ++ HPN++ L+G C + L++ Y
Sbjct: 62 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPY 118
Query: 185 MPNRSVQDHLTSRFQATLPWNTRL-KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + +++ + R + P L A+G+ +L + + RD + N +LDE
Sbjct: 119 MKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDE 173
Query: 244 QWNAKLSDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
++ K++DFGLAR H T + + A E +QT + T KSD+WSFGV L+
Sbjct: 174 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 233
Query: 302 ELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANK 361
EL+T P P + + + +L ++ L+ +Y L V K
Sbjct: 234 ELMTRGAP-----PYPDVNTFD-ITVYLLQGRRL-------LQPEYC---PDPLYEVMLK 277
Query: 362 CLARQAKGRPKMSEVVEVLNKI 383
C +A+ RP SE+V ++ I
Sbjct: 278 CWHPKAEMRPSFSELVSRISAI 299
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGC 98
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 156 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
Query: 309 P 309
P
Sbjct: 215 P 215
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E N+L V+HP +V LI Y + G + LI EY+ + L + +T
Sbjct: 71 ERNILEEVKHPFIVDLI-YAFQT---GGKLYLILEYLSGGELFMQLER--EGIFMEDTAC 124
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ + L +LH+ II+RD K NI+L+ Q + KL+DFGL + DG V+
Sbjct: 125 FYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTH 179
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL-DRNRPKSEQKLLEW--- 324
GTI Y APE + D WS G +Y+++TG P NR K+ K+L+
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 325 VRPHLT 330
+ P+LT
Sbjct: 240 LPPYLT 245
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 127 KIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
KI + +K + + G Q + + +G ++H ++V+L+G C G L+ +Y+
Sbjct: 42 KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYL 96
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
P S+ DH+ A P L A+G+ YL E ++ R+ + N+LL
Sbjct: 97 PLGSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPS 152
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+++DFG+A L P D + + I + A E I G+ T++SD+WS+GV ++EL+T
Sbjct: 153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
Query: 306 -GRRPLDRNRPKSEQKLLE 323
G P R LLE
Sbjct: 213 FGAEPYAGLRLAEVPDLLE 231
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E N+L V+HP +V LI Y + G + LI EY+ + L + +T
Sbjct: 71 ERNILEEVKHPFIVDLI-YAFQT---GGKLYLILEYLSGGELFMQLER--EGIFMEDTAC 124
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ + L +LH+ II+RD K NI+L+ Q + KL+DFGL + DG V+
Sbjct: 125 FYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTH 179
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL-DRNRPKSEQKLLEW--- 324
GTI Y APE + D WS G +Y+++TG P NR K+ K+L+
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 325 VRPHLT 330
+ P+LT
Sbjct: 240 LPPYLT 245
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 212 VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMSKGS 265
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + +A A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 266 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 322
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGL RL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 323 ADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
Query: 309 P 309
P
Sbjct: 382 P 382
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVKQL G +++ E+ +L + +VK G + ++ L+ EY+P+
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGC 99
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D L R +A L + L + +G+ YL + + RD + NIL++ + + K+
Sbjct: 100 LRDFL-QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKI 155
Query: 250 SDFGLARLGPSDGLSHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+DFGLA+L P D +V I + APE + + +SD+WSFGV LYEL T
Sbjct: 156 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P V
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPRGEVYKE 103
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 104 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 154
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 155 ADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 310 LDRN 313
+ N
Sbjct: 211 FEAN 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL---TSRFQATLPWN 205
EV VL H N++ +GY +D+ ++ ++ S+ HL ++FQ
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKDN-----LAIVTQWCEGSSLYKHLHVQETKFQMF---- 132
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265
+ IA+ A+G+ YLH II RD KS+NI L E K+ DFGLA + S
Sbjct: 133 QLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 266 VSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRP 309
G++ + APE I+ +++SD++S+G+ LYEL+TG P
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 37/248 (14%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLP 203
++++ E +++G +HPN+V L G RG +++ E+M N ++ D +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVT----RGKPVMIVIEFMENGAL-DAFLRKHDGQFT 143
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
+ + + A G+ YL D + RD + NIL++ K+SDFGL+R+ D
Sbjct: 144 VIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDP 199
Query: 264 SHVSTAVVGTIG--YAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPL----DRNRPK 316
V T G I + APE IQ + T SD+WS+G+ ++E+++ G RP +++ K
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 259
Query: 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV 376
+ ++ P A ++LD C ++ RPK ++
Sbjct: 260 AIEEGYRLPAPMDCPAGLHQLMLD---------------------CWQKERAERPKFEQI 298
Query: 377 VEVLNKIV 384
V +L+K++
Sbjct: 299 VGILDKMI 306
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 62 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 115
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 116 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 166
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 167 ADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
Query: 310 LDRN 313
+ N
Sbjct: 223 FEAN 226
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVKQL G +++ E+ +L + +VK G + ++ L+ EY+P+
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGC 112
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D L R +A L + L + +G+ YL + + RD + NIL++ + + K+
Sbjct: 113 LRDFL-QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKI 168
Query: 250 SDFGLARLGPSDGLSHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+DFGLA+L P D +V I + APE + + +SD+WSFGV LYEL T
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 37/253 (14%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL-TSRFQATL 202
+++++E +++G +HPN+++L G RG +++ EYM N S+ L T Q T+
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFLRTHDGQFTI 150
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD- 261
+ + + G+ YL D + RD + N+L+D K+SDFGL+R+ D
Sbjct: 151 --MQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPL----DRNRPK 316
+ +T I + APE I + SD+WSFGV ++E++ G RP +R+
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS 265
Query: 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV 376
S ++ P ++LD C + RP+ S++
Sbjct: 266 SVEEGYRLPAPMGCPHALHQLMLD---------------------CWHKDRAQRPRFSQI 304
Query: 377 VEVLNKIVDAAET 389
V VL+ ++ + E+
Sbjct: 305 VSVLDALIRSPES 317
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVKQL G +++ E+ +L + +VK G + ++ L+ EY+P+
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR--LVMEYLPSGC 100
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D L R +A L + L + +G+ YL + + RD + NIL++ + + K+
Sbjct: 101 LRDFL-QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKI 156
Query: 250 SDFGLARLGPSDGLSHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+DFGLA+L P D +V I + APE + + +SD+WSFGV LYEL T
Sbjct: 157 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMNKGS 95
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + ++ A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 152
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 153 ADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
Query: 309 P 309
P
Sbjct: 212 P 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 71 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 124
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 125 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 175
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 176 ADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 310 LDRN 313
+ N
Sbjct: 232 FEAN 235
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 40 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 94
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 95 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 151
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 152 KVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
Query: 307 RRP 309
P
Sbjct: 211 MSP 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTY 93
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 307 RRP 309
P
Sbjct: 210 MSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 98
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 99 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 155
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 307 RRP 309
P
Sbjct: 215 MSP 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTY 93
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 307 RRP 309
P
Sbjct: 210 MSP 212
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 41 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 95
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 96 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 152
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 153 KVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 307 RRP 309
P
Sbjct: 212 MSP 214
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 93
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 307 RRP 309
P
Sbjct: 210 MSP 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 40 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTY 94
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 95 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 151
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 152 KVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 305 T-GRRP 309
T G P
Sbjct: 208 TYGMSP 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 152 VLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
+L +V HP ++++ G +D + Q +I +Y+ + L R P A
Sbjct: 59 MLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYA 112
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
+ L YLH II+RD K NILLD+ + K++DFG A+ P V+ +
Sbjct: 113 AEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL-DRNRPKSEQKLL 322
GT Y APE + T D WSFG+ +YE++ G P D N K+ +K+L
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 93
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 307 RRP 309
P
Sbjct: 210 MSP 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKE--AKRIPE 113
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ RGLAYL E QI+ RD K SNIL++ + KL DFG++ +
Sbjct: 114 EILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 167
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y APE +Q + +SDIWS G+ L EL GR P+ P + K LE
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI----PPPDAKELEA 223
Query: 325 V--RP 327
+ RP
Sbjct: 224 IFGRP 228
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 30/197 (15%)
Query: 127 KIDIAVKQLSRRGLQG-HKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEY 184
++D A+K++ + H+++ E+ VL + HPN++ L+G C + RG L I EY
Sbjct: 52 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI-EY 107
Query: 185 MPNRSVQDHL--------------TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
P+ ++ D L + +TL L A D ARG+ YL + Q I
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI 164
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLT 288
RD + NIL+ E + AK++DFGL+R G +G + + A E + T
Sbjct: 165 HRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYT 219
Query: 289 YKSDIWSFGVFLYELIT 305
SD+WS+GV L+E+++
Sbjct: 220 TNSDVWSYGVLLWEIVS 236
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 165
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 166 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTY 98
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 155
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 307 RRP 309
P
Sbjct: 215 MSP 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 127 KIDIAVKQLSRR-GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
KI +A+K L + +KE + E V+ V P + +L+G C + L+ + M
Sbjct: 46 KIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-----LVTQLM 100
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
P + DH+ + L L A+G++YL D +++ RD + N+L+
Sbjct: 101 PYGCLLDHVREN-RGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPN 156
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ K++DFGLARL D + + I + A E I R T++SD+WS+GV ++EL+T
Sbjct: 157 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
Query: 306 -GRRPLDRNRPKSEQKLLE 323
G +P D + LLE
Sbjct: 217 FGAKPYDGIPAREIPDLLE 235
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 41 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 95
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 96 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 152
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 153 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 307 RRP 309
P
Sbjct: 212 MSP 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+K L + G + ++ E V+ + H LV+L +E+ ++ EYM S
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-----IYIVTEYMNKGS 95
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+ D L L + ++ A G+AY+ E M++ + RD +++NIL+ E K+
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-ERMNY--VHRDLRAANILVGENLVCKV 152
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRR 308
+DFGLARL + + A I + APE GR T KSD+WSFG+ L EL T GR
Sbjct: 153 ADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
Query: 309 P 309
P
Sbjct: 212 P 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 41 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 95
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 96 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 152
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 153 KVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 305 T-GRRP 309
T G P
Sbjct: 209 TYGMSP 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 41 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 96
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
E M N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 97 EXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 152
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 153 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 213 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 256
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 257 -----CWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 103
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 104 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 154
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 155 ADFGWSVHAPSSR----RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 310 LDRN 313
+ N
Sbjct: 211 FEAN 214
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 98
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 155
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 307 RRP 309
P
Sbjct: 215 MSP 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 98
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 155
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 156 KVADFGLSRLMTGD----TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 305 T-GRRP 309
T G P
Sbjct: 212 TYGMSP 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 52 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 106
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 107 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 163
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 164 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 222
Query: 307 RRP 309
P
Sbjct: 223 MSP 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V+++ + KK +A+K+++ Q E + E+ + HPN+V DE
Sbjct: 30 VVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL- 88
Query: 176 IQRLLIYEYMPNRSVQD---HLTSRFQ---ATLPWNTRLKIAQDAARGLAYLHEGMDFQI 229
L+ + + SV D H+ ++ + L +T I ++ GL YLH+
Sbjct: 89 ---WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--- 142
Query: 230 IFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG---LSHVSTAVVGTIGYAAPEYIQTGR 286
I RD K+ NILL E + +++DFG++ + G + V VGT + APE ++ R
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 287 -LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKKFTMILDPKLE 344
+K+DIWSFG+ EL TG P + P L L+ P L T + D ++
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE-----TGVQDKEML 257
Query: 345 GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
KY K +K+ ++ CL + + RP +E++
Sbjct: 258 KKYG-KSFRKMISL---CLQKDPEKRPTAAELL 286
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 30/197 (15%)
Query: 127 KIDIAVKQLSRRGLQG-HKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEY 184
++D A+K++ + H+++ E+ VL + HPN++ L+G C + RG L I EY
Sbjct: 42 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI-EY 97
Query: 185 MPNRSVQDHL--------------TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
P+ ++ D L + +TL L A D ARG+ YL + Q I
Sbjct: 98 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI 154
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLT 288
RD + NIL+ E + AK++DFGL+R G +G + + A E + T
Sbjct: 155 HRDLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYT 209
Query: 289 YKSDIWSFGVFLYELIT 305
SD+WS+GV L+E+++
Sbjct: 210 TNSDVWSYGVLLWEIVS 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 30/276 (10%)
Query: 126 KKIDIAVKQL-SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
++I +A+K L S + +++++E +++G +HPN++ L G + ++I E+
Sbjct: 34 REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEF 89
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
M N S+ D + + + + A G+ YL D + R + NIL++
Sbjct: 90 MENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSN 145
Query: 245 WNAKLSDFGLARLGPSDGLSHVSTAVVG---TIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R D T+ +G I + APE IQ + T SD+WS+G+ ++
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 302 ELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVAN 360
E+++ G RP + + +A + L P ++ L +
Sbjct: 206 EVMSYGERPY-----------WDMTNQDVINAIEQDYRLPPPMD------CPSALHQLML 248
Query: 361 KCLARQAKGRPKMSEVVEVLNKIVDAAETGTPQTPL 396
C + RPK ++V L+K++ + PL
Sbjct: 249 DCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPL 284
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 118
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 119 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 167
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 168 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 44 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 98
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 99 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 155
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 156 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 307 RRP 309
P
Sbjct: 215 MSP 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
E M N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 124 SHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
S K+I +A+K L + + +++ E +++G +HPN+++L G + +++
Sbjct: 70 SKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV----MIVT 125
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
E M N S+ D + A + + + A G+ YL D + RD + NIL++
Sbjct: 126 EXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLY 301
K+SDFGL+R+ D + +T I + +PE I + T SD+WS+G+ L+
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 302 ELIT-GRRPL----DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
E+++ G RP +++ K+ + P A + ++LD
Sbjct: 242 EVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLD---------------- 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNKIV 384
C + RPK ++V +L+K++
Sbjct: 286 -----CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 93
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 94 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 307 RRP 309
P
Sbjct: 210 MSP 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 43 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 97
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 98 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 154
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 155 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213
Query: 307 RRP 309
P
Sbjct: 214 MSP 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 101
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 102 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 152
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS A+ GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 153 ADFGWSVHAPSSR----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 310 LDRN 313
+ N
Sbjct: 209 FEAN 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 39 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 93
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL + I RD + N L+ E
Sbjct: 94 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLV 150
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-G 306
K++DFGL+RL D + + A I + APE + + + KSD+W+FGV L+E+ T G
Sbjct: 151 KVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 307 RRP 309
P
Sbjct: 210 MSP 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 163 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V+++ + KK +A+K+++ Q E + E+ + HPN+V DE
Sbjct: 25 VVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL- 83
Query: 176 IQRLLIYEYMPNRSVQD---HLTSRFQ---ATLPWNTRLKIAQDAARGLAYLHEGMDFQI 229
L+ + + SV D H+ ++ + L +T I ++ GL YLH+
Sbjct: 84 ---WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--- 137
Query: 230 IFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG---LSHVSTAVVGTIGYAAPEYIQTGR 286
I RD K+ NILL E + +++DFG++ + G + V VGT + APE ++ R
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 287 -LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKKFTMILDPKLE 344
+K+DIWSFG+ EL TG P + P L L+ P L T + D ++
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE-----TGVQDKEML 252
Query: 345 GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
KY K +K+ ++ CL + + RP +E++
Sbjct: 253 KKYG-KSFRKMISL---CLQKDPEKRPTAAELL 281
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 103
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 104 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 154
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 155 ADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 310 LDRN 313
+ N
Sbjct: 211 FEAN 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 130 IAVKQLSR---RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+AVK L+R R L + E+ L + HP+++KL + + ++ EY+
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI----FMVMEYVS 99
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
+ D++ L ++ Q G+ Y H M ++ RD K N+LLD N
Sbjct: 100 GGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMN 154
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELI 304
AK++DFGL+ + SDG G+ YAAPE I +GRL + DIWS GV LY L+
Sbjct: 155 AKIADFGLSNMM-SDG--EFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALL 210
Query: 305 TGRRPLDRNR-PKSEQKLL-------EWVRPHLTDAKKFTMILDP 341
G P D + P +K+ +++ P + K + +DP
Sbjct: 211 CGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDP 255
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVKQL G +++ E+ +L + +VK G ++ L+ EY+P+
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELR--LVMEYLPSGC 96
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
++D L R +A L + L + +G+ YL + + RD + NIL++ + + K+
Sbjct: 97 LRDFL-QRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKI 152
Query: 250 SDFGLARLGPSD-GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+DFGLA+L P D V I + APE + + +SD+WSFGV LYEL T
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 165
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 166 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 163 --RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 46 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 99
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 100 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 150
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 151 ADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
Query: 310 LDRN 313
+ N
Sbjct: 207 FEAN 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 98
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 99 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 149
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 150 ADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 310 LDRN 313
+ N
Sbjct: 206 FEAN 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 117
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 166
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 167 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 114
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 115 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-- 163
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 164 --RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
A+ GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 163 --RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 98
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 99 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 149
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS T + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 150 ADFGWSVHAPSSR----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 310 LDRN 313
+ N
Sbjct: 206 FEAN 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 112
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 113 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 161
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 162 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 123 DSHKKIDIAVK-----QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177
+ +K +A+K QL + G++ + EV + + HPN+++L GY + +
Sbjct: 26 EKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATR 79
Query: 178 RLLIYEYMPNRSVQDHLT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
LI EY P +V L S+F Q T + T L A L+Y H ++I RD
Sbjct: 80 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRD 130
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K N+LL K++DFG + PS T + GT+ Y PE I+ K D+
Sbjct: 131 IKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGRMHDEKVDL 186
Query: 294 WSFGVFLYELITGRRPLDRN 313
WS GV YE + G+ P + N
Sbjct: 187 WSLGVLCYEFLVGKPPFEAN 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 45 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDS----TRVYLILEYAPLGTVYRE 98
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 99 LQKLSKFDEQRTATYITEL------ANALSYCHSK---KVIHRDIKPENLLLGSAGELKI 149
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS A+ GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 150 ADFGWSVHAPSSR----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 310 LDRN 313
+ N
Sbjct: 206 FEAN 209
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 122 EDSHKKIDIAVKQL---SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR 178
ED+ I +A+K + R + K + EV+ + H N+V +I EDD
Sbjct: 31 EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----CY 86
Query: 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
L+ EY+ ++ +++ S L +T + G+ + H D +I+ RD K N
Sbjct: 87 YLVMEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQN 141
Query: 239 ILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
IL+D K+ DFG+A+ L+ + V+GT+ Y +PE + +DI+S G+
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGI 200
Query: 299 FLYELITGRRPLD 311
LYE++ G P +
Sbjct: 201 VLYEMLVGEPPFN 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 163 --RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 49 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 108
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 109 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 157
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 158 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 216
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 217 VTVWELMTFGSKPYD-GIPASE 237
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 105
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 106 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 154
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 213
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 214 VTVWELMTFGSKPYD-GIPASE 234
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 43 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 102
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 103 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 151
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 152 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 210
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 211 VTVWELMTFGSKPYD-GIPASE 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 101
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 102 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 150
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 209
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 210 VTVWELMTFGSKPYD-GIPASE 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 40 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 99
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 100 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 148
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 207
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 208 VTVWELMTFGSKPYD-GIPASE 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 16/186 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 246 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 300
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL E +F I R+ + N L+ E
Sbjct: 301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNF--IHRNLAARNCLVGENHLV 357
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 358 KVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413
Query: 305 T-GRRP 309
T G P
Sbjct: 414 TYGMSP 419
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 40 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 99
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 100 PFGXLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 148
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 207
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 208 VTVWELMTFGSKPYD-GIPASE 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 105
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 106 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 154
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 213
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 214 VTVWELMTFGSKPYD-GIPASE 234
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 100
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 101 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 149
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 150 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 208
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 209 VTVWELMTFGSKPYD-GIPASE 229
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 98
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 99 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 147
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 207 VTVWELMTFGSKPYD-GIPASE 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 35/247 (14%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLP 203
++++ E +++G +HPN++ L G + +++ EYM N S+ D +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSK----PVMIVTEYMENGSL-DTFLKKNDGQFT 122
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
+ + + + G+ YL D + RD + NIL++ K+SDFGL+R+ D
Sbjct: 123 VIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 264 SHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPL----DRNRPKS 317
+ +T I + APE I + T SD+WS+G+ ++E+++ G RP +++ K+
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKA 239
Query: 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
++ P A + ++LD C ++ RPK E+V
Sbjct: 240 VEEGYRLPSPMDCPAALYQLMLD---------------------CWQKERNSRPKFDEIV 278
Query: 378 EVLNKIV 384
+L+K++
Sbjct: 279 NMLDKLI 285
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 45 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 104
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 105 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 153
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 154 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 212
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 213 VTVWELMTFGSKPYD-GIPASE 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 98
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 99 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 147
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 207 VTVWELMTFGSKPYD-GIPASE 227
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 115
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K+++FG + PS
Sbjct: 116 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-- 164
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 165 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P V
Sbjct: 50 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPRGEVYKE 103
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 104 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 154
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 155 ADFGWSVHAPSSR----RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 310 LDRN 313
+ N
Sbjct: 211 FEAN 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 101
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 102 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 150
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 209
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 210 VTVWELMTFGSKPYD-GIPASE 230
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 30/197 (15%)
Query: 127 KIDIAVKQLSRRGLQG-HKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEY 184
++D A+K++ + H+++ E+ VL + HPN++ L+G C + RG L I EY
Sbjct: 49 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC---EHRGYLYLAI-EY 104
Query: 185 MPNRSVQDHL--------------TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
P+ ++ D L + +TL L A D ARG+ YL + Q I
Sbjct: 105 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI 161
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLT 288
R+ + NIL+ E + AK++DFGL+R G +G + + A E + T
Sbjct: 162 HRNLAARNILVGENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYT 216
Query: 289 YKSDIWSFGVFLYELIT 305
SD+WS+GV L+E+++
Sbjct: 217 TNSDVWSYGVLLWEIVS 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++L V HP +VKL Y + + + LI +++ + L+ T + +
Sbjct: 80 ERDILADVNHPFVVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFT-EEDVKF 134
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+A+ A GL +LH II+RD K NILLDE+ + KL+DFGL++ + + H
Sbjct: 135 YLAE-LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKK 186
Query: 269 A--VVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
A GT+ Y APE + ++ +D WS+GV ++E++TG P
Sbjct: 187 AYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 98
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 99 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 147
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 207 VTVWELMTFGSKPYD-GIPASE 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 105
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 106 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 154
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 155 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 213
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 214 VTVWELMTFGSKPYD-GIPASE 234
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 101
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 102 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 150
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 209
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 210 VTVWELMTFGSKPYD-GIPASE 230
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 98
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 99 PFGXLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 147
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 207 VTVWELMTFGSKPYD-GIPASE 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 64 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 123
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 124 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 172
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 173 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 231
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 232 VTVWELMTFGSKPYD-GIPASE 252
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 98
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 99 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 147
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 207 VTVWELMTFGSKPYD-GIPASE 227
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 101
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 102 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 150
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 151 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 209
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 210 VTVWELMTFGSKPYD-GIPASE 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 33 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 92
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 93 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 141
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 200
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 201 VTVWELMTFGSKPYD-GIPASE 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 100
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 101 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 149
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 150 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 208
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 209 VTVWELMTFGSKPYD-GIPASE 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 47 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 100
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 101 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 151
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 152 ADFGWSVHAPSSR----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
Query: 310 LDRN 313
+ N
Sbjct: 208 FEAN 211
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 19/195 (9%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
KI +AVK L K++ E +L ++H ++VK G C E D ++++EYM
Sbjct: 43 KILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL----IMVFEYMK 98
Query: 187 NRSVQDHLTSRFQ-----------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
+ + L + L + L IAQ A G+ YL + RD
Sbjct: 99 HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLA 155
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWS 295
+ N L+ E K+ DFG++R S V + I + PE I + T +SD+WS
Sbjct: 156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 215
Query: 296 FGVFLYELIT-GRRP 309
GV L+E+ T G++P
Sbjct: 216 LGVVLWEIFTYGKQP 230
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRFQATLPW 204
V+EVN+L ++HPN+V+ Y D ++ EY + +T ++ + L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 205 NTRLKIAQDAARGLAYLHEGMD--FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ D
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
+ + A VGT Y +PE Q R++Y KSDIWS G LYEL P
Sbjct: 170 -TSFAKAFVGTPYYMSPE--QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 285 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 339
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL E +F I R+ + N L+ E
Sbjct: 340 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNF--IHRNLAARNCLVGENHLV 396
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 397 KVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 452
Query: 305 T 305
T
Sbjct: 453 T 453
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 153 LGVVEHPNLVKLIGYCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L+ CA +R I+ L++E++ ++ ++ +L LP T +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
+ RGL +LH I+ RD K NIL+ KL+DFGLAR+ T VV
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVV 180
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
T+ Y APE + D+WS G E+ R+PL
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 71 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 124
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 125 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 175
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 176 ADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 310 LDRN 313
+ N
Sbjct: 232 FEAN 235
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 130 IAVKQLSRRGLQGHKE-WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL-------LI 181
+A+KQ + ++E W E+ ++ + HPN+V A + G+Q+L L
Sbjct: 43 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-----AREVPDGLQKLAPNDLPLLA 97
Query: 182 YEYMPNRSVQDHLTSRFQATL-----PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236
EY ++ +L ++F+ P T L D + L YLHE +II RD K
Sbjct: 98 MEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLS---DISSALRYLHEN---RIIHRDLKP 150
Query: 237 SNILLD---EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
NI+L ++ K+ D G A+ + T VGT+ Y APE ++ + T D
Sbjct: 151 ENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDY 207
Query: 294 WSFGVFLYELITGRRPLDRN----------RPKSEQKLLEWVRPHLTDAKKFTMIL 339
WSFG +E ITG RP N R KS + ++ V LT A KF+ +L
Sbjct: 208 WSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV--VYDDLTGAVKFSSVL 261
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKEWV-TEVNVLGVVEHPNLVKLIGYCAEDD--ERGIQ 177
ED + +A+K ++++ L+G + + E+ VL ++HPN+V L DD E G
Sbjct: 37 AEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGH 90
Query: 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKI-AQDAARGLAYLHEGMDFQIIFRDFKS 236
LI + + + D + + T +RL DA + YLH D I+ RD K
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---YLH---DLGIVHRDLKP 144
Query: 237 SNIL---LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
N+L LDE +SDFGL+++ D S +STA GT GY APE + + D
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDC 201
Query: 294 WSFGVFLYELITGRRPL-DRNRPKSEQKLLE 323
WS GV Y L+ G P D N K +++L+
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 130 IAVKQLSRRGLQGHKE-WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL-------LI 181
+A+KQ + ++E W E+ ++ + HPN+V A + G+Q+L L
Sbjct: 42 VAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-----AREVPDGLQKLAPNDLPLLA 96
Query: 182 YEYMPNRSVQDHLTSRFQATL-----PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236
EY ++ +L ++F+ P T L D + L YLHE +II RD K
Sbjct: 97 MEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLS---DISSALRYLHEN---RIIHRDLKP 149
Query: 237 SNILLD---EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
NI+L ++ K+ D G A+ + T VGT+ Y APE ++ + T D
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDY 206
Query: 294 WSFGVFLYELITGRRPLDRN----------RPKSEQKLLEWVRPHLTDAKKFTMIL 339
WSFG +E ITG RP N R KS + ++ V LT A KF+ +L
Sbjct: 207 WSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV--VYDDLTGAVKFSSVL 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 16/186 (8%)
Query: 128 IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+ +AVK L ++ +E++ E V+ ++HPNLV+L+G C R +I E+M
Sbjct: 243 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTY 297
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
++ D+L + + L +A + + YL E +F I R+ + N L+ E
Sbjct: 298 GNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNF--IHRNLAARNCLVGENHLV 354
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGT---IGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
K++DFGL+RL D TA G I + APE + + + KSD+W+FGV L+E+
Sbjct: 355 KVADFGLSRLMTGD----TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 410
Query: 305 T-GRRP 309
T G P
Sbjct: 411 TYGMSP 416
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 46 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 99
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 100 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 150
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 151 ADFGWSVHAPSSR----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
Query: 310 LDRN 313
+ N
Sbjct: 207 FEAN 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 103
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 157
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K E
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAK--ED 211
Query: 325 VRPHLTDAKKFTMILD---PKL-EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV-VEV 379
RP + + I++ PKL G +S++ NKCL + R + ++ V
Sbjct: 212 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQD----FVNKCLIKNPAERADLKQLMVHA 267
Query: 380 LNKIVDAAET 389
K DA E
Sbjct: 268 FIKRSDAEEV 277
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 34/251 (13%)
Query: 140 LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQ 199
++ +E+ EV ++ + HPN+VKL G ++ E++P + L +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAH 117
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWN--AKLSDFGL 254
+ W+ +L++ D A G+ Y+ + + I+ RD +S NI L DE AK++DFGL
Sbjct: 118 P-IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPLDR 312
++ H + ++G + APE I +Y K+D +SF + LY ++TG P D
Sbjct: 176 SQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 313 NRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK 372
S K+ K MI + L +L V C + K RP
Sbjct: 231 ---YSYGKI-----------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 373 MSEVVEVLNKI 383
S +V+ L+++
Sbjct: 277 FSYIVKELSEL 287
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K+++FG + PS
Sbjct: 117 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-- 165
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
T + GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 166 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 133 KQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQD 192
K L++ +QG E E++ L ++ HP+++KL DE +++ EY N + D
Sbjct: 50 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFD 102
Query: 193 HLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252
++ R + + R Q + Y H +I+ RD K N+LLDE N K++DF
Sbjct: 103 YIVQRDKMSEQEARRF--FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF 157
Query: 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
GL+ + +DG + + T+ G+ YAAPE I +G+L + D+WS GV LY ++ R P
Sbjct: 158 GLSNIM-TDG-NFLKTS-CGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
Query: 311 D--------RNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341
D +N L +++ P K +I++P
Sbjct: 214 DDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 252
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 128/272 (47%), Gaps = 28/272 (10%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHK-EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179
T K++ +A+K L + + +++ E ++G H N+++L G ++ +
Sbjct: 67 TSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM----M 122
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
+I EYM N ++ L + + + + A G+ YL + + RD + NI
Sbjct: 123 IITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNI 178
Query: 240 LLDEQWNAKLSDFGLARLGPSDG-LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
L++ K+SDFGL+R+ D ++ ++ I + APE I + T SD+WSFG+
Sbjct: 179 LVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGI 238
Query: 299 FLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
++E++T G RP S ++++ + D + +D +
Sbjct: 239 VMWEVMTYGERPYWE---LSNHEVMK----AINDGFRLPTPMD----------CPSAIYQ 281
Query: 358 VANKCLARQAKGRPKMSEVVEVLNKIVDAAET 389
+ +C ++ RPK +++V +L+K++ A ++
Sbjct: 282 LMMQCWQQERARRPKFADIVSILDKLIRAPDS 313
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 133 KQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQD 192
K L++ +QG E E++ L ++ HP+++KL DE +++ EY N + D
Sbjct: 49 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFD 101
Query: 193 HLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252
++ R + + R Q + Y H +I+ RD K N+LLDE N K++DF
Sbjct: 102 YIVQRDKMSEQEARRF--FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF 156
Query: 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
GL+ + +DG + + T+ G+ YAAPE I +G+L + D+WS GV LY ++ R P
Sbjct: 157 GLSNIM-TDG-NFLKTS-CGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
Query: 311 D--------RNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341
D +N L +++ P K +I++P
Sbjct: 213 DDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNP 251
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L SRF Q T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-- 166
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
T + GT+ Y PE I+ K D+WS GV YE + G P +
Sbjct: 167 --RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 36 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 95
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A G+ YL D +++ RD + N
Sbjct: 96 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AEGMNYLE---DRRLVHRDLAARN 144
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 145 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 203
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 204 VTVWELMTFGSKPYD-GIPASE 224
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 18/181 (9%)
Query: 133 KQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQD 192
K L++ +QG E E++ L ++ HP+++KL DE +++ EY N + D
Sbjct: 40 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFD 92
Query: 193 HLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252
++ R + + R Q + Y H +I+ RD K N+LLDE N K++DF
Sbjct: 93 YIVQRDKMSEQEARRF--FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF 147
Query: 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
GL+ + +DG + + T+ G+ YAAPE I +G+L + D+WS GV LY ++ R P
Sbjct: 148 GLSNIM-TDG-NFLKTS-CGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
Query: 311 D 311
D
Sbjct: 204 D 204
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 116
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 165
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
+ GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 166 --RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRFQATL 202
+++ E +L HPN+V+LIG C Q+ IY M D LT A L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT-------QKQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
T L++ DAA G+ YL I RD + N L+ E+ K+SDFG++R +DG
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADG 266
Query: 263 LSHVSTAVVGT-IGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ S + + + APE + GR + +SD+WSFG+ L+E
Sbjct: 267 VXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKEWV-TEVNVLGVVEHPNLVKLIGYCAEDD--ERGIQ 177
ED + +A+K +++ L+G + + E+ VL ++HPN+V L DD E G
Sbjct: 37 AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGH 90
Query: 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKI-AQDAARGLAYLHEGMDFQIIFRDFKS 236
LI + + + D + + T +RL DA + YLH D I+ RD K
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---YLH---DLGIVHRDLKP 144
Query: 237 SNIL---LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
N+L LDE +SDFGL+++ D S +STA GT GY APE + + D
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDC 201
Query: 294 WSFGVFLYELITGRRPL-DRNRPKSEQKLL 322
WS GV Y L+ G P D N K +++L
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKEWV-TEVNVLGVVEHPNLVKLIGYCAEDD--ERGIQ 177
ED + +A+K +++ L+G + + E+ VL ++HPN+V L DD E G
Sbjct: 37 AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGH 90
Query: 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKI-AQDAARGLAYLHEGMDFQIIFRDFKS 236
LI + + + D + + T +RL DA + YLH D I+ RD K
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---YLH---DLGIVHRDLKP 144
Query: 237 SNIL---LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
N+L LDE +SDFGL+++ D S +STA GT GY APE + + D
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDC 201
Query: 294 WSFGVFLYELITGRRPL-DRNRPKSEQKLL 322
WS GV Y L+ G P D N K +++L
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKEWV-TEVNVLGVVEHPNLVKLIGYCAEDD--ERGIQ 177
ED + +A+K +++ L+G + + E+ VL ++HPN+V L DD E G
Sbjct: 37 AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL------DDIYESGGH 90
Query: 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKI-AQDAARGLAYLHEGMDFQIIFRDFKS 236
LI + + + D + + T +RL DA + YLH D I+ RD K
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---YLH---DLGIVHRDLKP 144
Query: 237 SNIL---LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
N+L LDE +SDFGL+++ D S +STA GT GY APE + + D
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDC 201
Query: 294 WSFGVFLYELITGRRPL-DRNRPKSEQKLL 322
WS GV Y L+ G P D N K +++L
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQIL 231
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 126 KKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
++I +A+K L + G + +++++E +++G +HPN++ L G + ++I E
Sbjct: 56 REICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KCKPVMIITE 110
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
YM N S+ L RF + + + G+ YL D + RD + NIL
Sbjct: 111 YMENGSLDAFLRKNDGRFTVI----QLVGMLRGIGSGMKYLS---DMSAVHRDLAARNIL 163
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
++ K+SDFG++R+ D + +T I + APE I + T SD+WS+G+
Sbjct: 164 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 223
Query: 300 LYELIT-GRRPL-DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
++E+++ G RP D + + + E R L P ++ I L Q +
Sbjct: 224 MWEVMSYGERPYWDMSNQDVIKAIEEGYR------------LPPPMD--CPIALHQLML- 268
Query: 358 VANKCLARQAKGRPKMSEVVEVLNKIV 384
C ++ RPK ++V +L+K++
Sbjct: 269 ---DCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
K+ +AVK L L K++ E +L ++H ++VK G C + D ++++EYM
Sbjct: 45 KMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL----IMVFEYMK 100
Query: 187 NRSVQDHLTS--------------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFR 232
+ + L + + + L + L IA A G+ YL + R
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHR 157
Query: 233 DFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSD 292
D + N L+ K+ DFG++R S V + I + PE I + T +SD
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 217
Query: 293 IWSFGVFLYELIT-GRRP 309
+WSFGV L+E+ T G++P
Sbjct: 218 VWSFGVILWEIFTYGKQP 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRFQATL 202
+++ E +L HPN+V+LIG C Q+ IY M D LT A L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCT-------QKQPIYIVMELVQGGDFLTFLRTEGARL 210
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
T L++ DAA G+ YL I RD + N L+ E+ K+SDFG++R +DG
Sbjct: 211 RVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADG 266
Query: 263 LSHVSTAVVGT-IGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ S + + + APE + GR + +SD+WSFG+ L+E
Sbjct: 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 18/181 (9%)
Query: 133 KQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQD 192
K L++ +QG E E++ L ++ HP+++KL DE +++ EY N + D
Sbjct: 44 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEI----IMVIEYAGNE-LFD 96
Query: 193 HLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252
++ R + + R Q + Y H +I+ RD K N+LLDE N K++DF
Sbjct: 97 YIVQRDKMSEQEARRF--FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF 151
Query: 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
GL+ + +DG + + T+ G+ YAAPE I +G+L + D+WS GV LY ++ R P
Sbjct: 152 GLSNIM-TDG-NFLKTS-CGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
Query: 311 D 311
D
Sbjct: 208 D 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 145 EWV-TEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATL 202
+WV TE +V HP LV L C + + R + EY+ + H+ Q L
Sbjct: 65 DWVQTEKHVFEQASNHPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQR--QRKL 118
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
P + + + L YLHE II+RD K N+LLD + + KL+D+G+ + G G
Sbjct: 119 PEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 175
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
++ GT Y APE ++ + D W+ GV ++E++ GR P D
Sbjct: 176 --DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 145 EWV-TEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATL 202
+WV TE +V HP LV L C + + R + EY+ + H+ Q L
Sbjct: 97 DWVQTEKHVFEQASNHPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQR--QRKL 150
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG--PS 260
P + + + L YLHE II+RD K N+LLD + + KL+D+G+ + G P
Sbjct: 151 PEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207
Query: 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
D ++ GT Y APE ++ + D W+ GV ++E++ GR P D
Sbjct: 208 D----TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L S+F Q T +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 113
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-- 162
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRN 313
+ GT+ Y PE I+ K D+WS GV YE + G+ P + N
Sbjct: 163 --RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 126 KKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
++I +A+K L + G + +++++E +++G +HPN++ L G + ++I E
Sbjct: 41 REICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KCKPVMIITE 95
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
YM N S+ L RF + + + G+ YL D + RD + NIL
Sbjct: 96 YMENGSLDAFLRKNDGRFTVI----QLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 148
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
++ K+SDFG++R+ D + +T I + APE I + T SD+WS+G+
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 208
Query: 300 LYELIT-GRRPL-DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
++E+++ G RP D + + + E R L P ++ I L Q +
Sbjct: 209 MWEVMSYGERPYWDMSNQDVIKAIEEGYR------------LPPPMD--CPIALHQLML- 253
Query: 358 VANKCLARQAKGRPKMSEVVEVLNKIV 384
C ++ RPK ++V +L+K++
Sbjct: 254 ---DCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 126 KKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
K+ID+A+K L + + +E + E ++ +++P +V+LIG C + +L+ E
Sbjct: 36 KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-----ALMLVMEM 90
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
+ L + + +P + ++ + G+ YL E + RD + N+LL +
Sbjct: 91 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNR 146
Query: 245 WNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
AK+SDFGL++ LG D +A + + APE I + + +SD+WS+GV ++E
Sbjct: 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206
Query: 304 IT-GRRPLDRNRPKSEQKLLE 323
++ G++P + + +E
Sbjct: 207 LSYGQKPYKKMKGPEVMAFIE 227
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 38/267 (14%)
Query: 126 KKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
++I +A+K L + G + +++++E +++G +HPN++ L G + ++I E
Sbjct: 35 REICVAIKTL-KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV----MIITE 89
Query: 184 YMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
YM N S+ L RF + + + G+ YL D + RD + NIL
Sbjct: 90 YMENGSLDAFLRKNDGRFTVI----QLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 142
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVST-AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
++ K+SDFG++R+ D + +T I + APE I + T SD+WS+G+
Sbjct: 143 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 202
Query: 300 LYELIT-GRRPL-DRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
++E+++ G RP D + + + E R L P ++ I L Q +
Sbjct: 203 MWEVMSYGERPYWDMSNQDVIKAIEEGYR------------LPPPMD--CPIALHQLML- 247
Query: 358 VANKCLARQAKGRPKMSEVVEVLNKIV 384
C ++ RPK ++V +L+K++
Sbjct: 248 ---DCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRFQATLPW 204
V+EVN+L ++HPN+V+ Y D ++ EY + +T ++ + L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 205 NTRLKIAQDAARGLAYLHEGMD--FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ D
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
+ + VGT Y +PE Q R++Y KSDIWS G LYEL P
Sbjct: 170 -TSFAKTFVGTPYYMSPE--QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+ +L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 73 EGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 132
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 133 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 181
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFGLA+ LG + H V I + A E I T++SD+WS+G
Sbjct: 182 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 240
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 241 VTVWELMTFGSKPYD-GIPASE 261
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
K+ +AVK L +++ E +L +++H ++V+ G C E G L+++EYM
Sbjct: 48 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE----GRPLLMVFEYMR 103
Query: 187 ----NRSVQDH-----LTSRFQATLP----WNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
NR ++ H L + + P L +A A G+ YL G+ F + RD
Sbjct: 104 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLHF--VHRD 160
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
+ N L+ + K+ DFG++R S V + I + PE I + T +SD+
Sbjct: 161 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 220
Query: 294 WSFGVFLYELIT-GRRP 309
WSFGV L+E+ T G++P
Sbjct: 221 WSFGVVLWEIFTYGKQP 237
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW---- 204
E +++ P +V+L +CA D++ + ++ EYMP + + L S + W
Sbjct: 125 ERDIMAFANSPWVVQL--FCAFQDDKYL--YMVMEYMPGGDLVN-LMSNYDVPEKWAKFY 179
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ +A DA + +H RD K N+LLD+ + KL+DFG G+
Sbjct: 180 TAEVVLALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 265 HVSTAVVGTIGYAAPEYIQT----GRLTYKSDIWSFGVFLYELITGRRPL 310
H TA VGT Y +PE +++ G + D WS GVFL+E++ G P
Sbjct: 231 HCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 153 LGVVEHPNLVKLIGYCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L+ CA +R I+ L++E++ ++ ++ +L LP T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
+ RGL +LH I+ RD K NIL+ KL+DFGLAR+ VV
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVV 172
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
T+ Y APE + D+WS G E+ R+PL
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
K+ +AVK L +++ E +L +++H ++V+ G C E G L+++EYM
Sbjct: 42 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE----GRPLLMVFEYMR 97
Query: 187 ----NRSVQDH-----LTSRFQATLP----WNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
NR ++ H L + + P L +A A G+ YL G+ F + RD
Sbjct: 98 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLHF--VHRD 154
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
+ N L+ + K+ DFG++R S V + I + PE I + T +SD+
Sbjct: 155 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 214
Query: 294 WSFGVFLYELIT-GRRP 309
WSFGV L+E+ T G++P
Sbjct: 215 WSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
K+ +AVK L +++ E +L +++H ++V+ G C E G L+++EYM
Sbjct: 71 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE----GRPLLMVFEYMR 126
Query: 187 ----NRSVQDH-----LTSRFQATLP----WNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
NR ++ H L + + P L +A A G+ YL G+ F + RD
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLHF--VHRD 183
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
+ N L+ + K+ DFG++R S V + I + PE I + T +SD+
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 243
Query: 294 WSFGVFLYELIT-GRRP 309
WSFGV L+E+ T G++P
Sbjct: 244 WSFGVVLWEIFTYGKQP 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 145 EWV-TEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATL 202
+WV TE +V HP LV L C + + R + EY+ + H+ Q L
Sbjct: 50 DWVQTEKHVFEQASNHPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQR--QRKL 103
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG--PS 260
P + + + L YLHE II+RD K N+LLD + + KL+D+G+ + G P
Sbjct: 104 PEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 160
Query: 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
D ++ GT Y APE ++ + D W+ GV ++E++ GR P D
Sbjct: 161 D----TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++L V HP +VKL Y + + + LI +++ + L+ T + +
Sbjct: 76 ERDILVEVNHPFIVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFT-EEDVKF 130
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+A+ A L +LH II+RD K NILLDE+ + KL+DFGL++ + + H
Sbjct: 131 YLAE-LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKK 182
Query: 269 A--VVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
A GT+ Y APE + T +D WSFGV ++E++TG P
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++L V HP +VKL Y + + + LI +++ + L+ T + +
Sbjct: 77 ERDILVEVNHPFIVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFT-EEDVKF 131
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+A+ A L +LH II+RD K NILLDE+ + KL+DFGL++ + + H
Sbjct: 132 YLAE-LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKK 183
Query: 269 A--VVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
A GT+ Y APE + T +D WSFGV ++E++TG P
Sbjct: 184 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 100
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 101 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 149
Query: 239 ILLDEQWNAKLSDFGLARL-GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFG A+L G + H V I + A E I T++SD+WS+G
Sbjct: 150 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 208
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 209 VTVWELMTFGSKPYD-GIPASE 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 100
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 101 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 149
Query: 239 ILLDEQWNAKLSDFGLARL-GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFG A+L G + H V I + A E I T++SD+WS+G
Sbjct: 150 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 208
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 209 VTVWELMTFGSKPYD-GIPASE 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH 193
QL + G++ + EV + + HPN+++L GY + + LI EY P +V
Sbjct: 48 QLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRE 101
Query: 194 LT--SRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
L S+F Q T + T L A L+Y H ++I RD K N+LL K+
Sbjct: 102 LQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKI 152
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+WS GV YE + G+ P
Sbjct: 153 ADFGWSVHAPSSR----RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 310 LDRN 313
+ N
Sbjct: 209 FEAN 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 145 EWV-TEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATL 202
+WV TE +V HP LV L C + + R + EY+ + H+ Q L
Sbjct: 54 DWVQTEKHVFEQASNHPFLVGLHS-CFQTESR---LFFVIEYVNGGDLMFHMQR--QRKL 107
Query: 203 PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG--PS 260
P + + + L YLHE II+RD K N+LLD + + KL+D+G+ + G P
Sbjct: 108 PEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164
Query: 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
D ++ GT Y APE ++ + D W+ GV ++E++ GR P D
Sbjct: 165 D----TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 15/164 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++L V HP +VKL Y + + + LI +++ + L+ T + +
Sbjct: 76 ERDILVEVNHPFIVKL-HYAFQTEGK---LYLILDFLRGGDLFTRLSKEVMFT-EEDVKF 130
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+A+ A L +LH II+RD K NILLDE+ + KL+DFGL++ + + H
Sbjct: 131 YLAE-LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKK 182
Query: 269 A--VVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
A GT+ Y APE + T +D WSFGV ++E++TG P
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 43 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLM 102
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 103 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 151
Query: 239 ILLDEQWNAKLSDFGLARL-GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFG A+L G + H V I + A E I T++SD+WS+G
Sbjct: 152 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 210
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 211 VTVWELMTFGSKPYD-GIPASE 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 153 LGVVEHPNLVKLIGYCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L+ CA +R I+ L++E++ ++ ++ +L LP T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
+ RGL +LH I+ RD K NIL+ KL+DFGLAR+ VV
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVV 172
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
T+ Y APE + D+WS G E+ R+PL
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 34/251 (13%)
Query: 140 LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQ 199
++ +E+ EV ++ + HPN+VKL G ++ E++P + L +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAH 117
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWN--AKLSDFGL 254
+ W+ +L++ D A G+ Y+ + + I+ RD +S NI L DE AK++DFG
Sbjct: 118 P-IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGT 175
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPLDR 312
++ H + ++G + APE I +Y K+D +SF + LY ++TG P D
Sbjct: 176 SQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 313 NRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK 372
S K+ K MI + L +L V C + K RP
Sbjct: 231 ---YSYGKI-----------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 373 MSEVVEVLNKI 383
S +V+ L+++
Sbjct: 277 FSYIVKELSEL 287
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 105
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 106 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 154
Query: 239 ILLDEQWNAKLSDFGLARL-GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFG A+L G + H V I + A E I T++SD+WS+G
Sbjct: 155 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 213
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 214 VTVWELMTFGSKPYD-GIPASE 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 98
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 99 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 147
Query: 239 ILLDEQWNAKLSDFGLARL-GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFG A+L G + H V I + A E I T++SD+WS+G
Sbjct: 148 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 206
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 207 VTVWELMTFGSKPYD-GIPASE 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
E KI +A+K+L + +KE + E V+ V++P++ +L+G C + I +L+
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLM 100
Query: 181 IYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
+ + + R +D++ S++ L W ++ A+G+ YL D +++ RD + N
Sbjct: 101 PFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLE---DRRLVHRDLAARN 149
Query: 239 ILLDEQWNAKLSDFGLARL-GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
+L+ + K++DFG A+L G + H V I + A E I T++SD+WS+G
Sbjct: 150 VLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-PIKWMALESILHRIYTHQSDVWSYG 208
Query: 298 VFLYELIT-GRRPLDRNRPKSE 318
V ++EL+T G +P D P SE
Sbjct: 209 VTVWELMTFGSKPYD-GIPASE 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRFQATLPW 204
V+EVN+L ++HPN+V+ Y D ++ EY + +T ++ + L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 205 NTRLKIAQDAARGLAYLHEGMD--FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ D
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPL 310
+ VGT Y +PE Q R++Y KSDIWS G LYEL P
Sbjct: 170 -EDFAKEFVGTPYYMSPE--QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 22/195 (11%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+++STED + + I +SR + +E EV VL ++HPN+V+ Y +E G
Sbjct: 42 LVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANMKHPNIVQ---YRESFEENG- 96
Query: 177 QRLLIYEYMPNRSVQDHLTSR----FQ--ATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
++ +Y + + ++ FQ L W ++ +A L ++H D +I+
Sbjct: 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH---DRKIL 147
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYK 290
RD KS NI L + +L DFG+AR+ + ++ A +GT Y +PE + K
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENKPYNNK 205
Query: 291 SDIWSFGVFLYELIT 305
SDIW+ G LYEL T
Sbjct: 206 SDIWALGCVLYELCT 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 129 DIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK + + L ++ EV ++ V+ HPN+VKL E E L+ EY
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF----EVIETEKTLYLVMEYAS 96
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
V D+L + + R K Q + + Y H+ I+ RD K+ N+LLD N
Sbjct: 97 GGEVFDYLVAHGRMK-EKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELIT 305
K++DFG + + A G YAAPE Q + + D+WS GV LY L++
Sbjct: 152 IKIADFGFSN---EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 306 GRRPLD 311
G P D
Sbjct: 209 GSLPFD 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 153 LGVVEHPNLVKLIGYCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L+ CA +R I+ L++E++ ++ ++ +L LP T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
+ RGL +LH I+ RD K NIL+ KL+DFGLAR+ VV
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVV 172
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
T+ Y APE + D+WS G E+ R+PL
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL +C +DDE+ L Y
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGL---SYA 119
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 120 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 172
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 173 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 232
Query: 304 ITGRRPL 310
+ G P
Sbjct: 233 VAGLPPF 239
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT--SRF--QATLPW 204
EV + + HPN+++L GY + + LI EY P +V L SRF Q T +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY 117
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
T L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 ITEL------ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-- 166
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT+ Y PE I+ K D+WS GV YE + G P +
Sbjct: 167 --RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 122 EDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
+ + +I A+K LSR +Q + ++ E ++ + HPN++ LIG + G+ +L
Sbjct: 44 DQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE--GLPHVL 101
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ YM + + + S Q + ARG+ YL E + + RD + N +
Sbjct: 102 L-PYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCM 156
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG------TIGYAAPEYIQTGRLTYKSDIW 294
LDE + K++DFGLAR D L +V + + A E +QT R T KSD+W
Sbjct: 157 LDESFTVKVADFGLAR----DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVW 212
Query: 295 SFGVFLYELITGRRPLDRN 313
SFGV L+EL+T P R+
Sbjct: 213 SFGVLLWELLTRGAPPYRH 231
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 34/251 (13%)
Query: 140 LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQ 199
++ +E+ EV ++ + HPN+VKL G ++ E++P + L +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAH 117
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWN--AKLSDFGL 254
+ W+ +L++ D A G+ Y+ + + I+ RD +S NI L DE AK++DF L
Sbjct: 118 P-IKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL 175
Query: 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELITGRRPLDR 312
++ H + ++G + APE I +Y K+D +SF + LY ++TG P D
Sbjct: 176 SQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 313 NRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK 372
S K+ K MI + L +L V C + K RP
Sbjct: 231 ---YSYGKI-----------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276
Query: 373 MSEVVEVLNKI 383
S +V+ L+++
Sbjct: 277 FSYIVKELSEL 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ VL + P + K G +D + I I EY+ S D L L
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEP---GPLDETQIA 107
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I ++ +GL YLH + I RD K++N+LL E KL+DFG+A G
Sbjct: 108 TILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRN 162
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328
VGT + APE I+ K+DIWS G+ EL G P P L+ P
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP- 221
Query: 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
P LEG YS L + + A CL ++ RP E+++
Sbjct: 222 ------------PTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ VL + P + K G +D + I I EY+ S D L L
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEP---GPLDETQIA 127
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I ++ +GL YLH + I RD K++N+LL E KL+DFG+A G
Sbjct: 128 TILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRN 182
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328
VGT + APE I+ K+DIWS G+ EL G P P L+ P
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP- 241
Query: 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
P LEG YS L + + A CL ++ RP E+++
Sbjct: 242 ------------PTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 275
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L + +P
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRIPE 165
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 166 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 219
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K LE
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 275
Query: 325 V 325
+
Sbjct: 276 M 276
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
+ HP +V + + G ++ EY+ +++D + + + + +++ DA
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADAC 126
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA-VVGTI 274
+ L + H+ II RD K +NI++ K+ DFG+AR G S TA V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
Y +PE + + +SD++S G LYE++TG P + P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 118 IRSTEDSHKKIDIAVKQLSRRGL--QGHKEWV-TEVNVLGVVEHPNLVKLIGYCAEDDER 174
+ E H +++A+K + ++ + G + V EV + ++HP++++L Y + +
Sbjct: 27 VYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN-- 84
Query: 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234
L+ E N + +L +R + N G+ YLH I+ RD
Sbjct: 85 --YVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQIITGMLYLHS---HGILHRDL 138
Query: 235 KSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294
SN+LL N K++DFGLA H + + GT Y +PE +SD+W
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVW 196
Query: 295 SFGVFLYELITGRRPLDRNRPKS 317
S G Y L+ GR P D + K+
Sbjct: 197 SLGCMFYTLLIGRPPFDTDTVKN 219
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ VL + P + K G +D + I I EY+ S D L L
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEP---GPLDETQIA 122
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I ++ +GL YLH + I RD K++N+LL E KL+DFG+A G
Sbjct: 123 TILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRN 177
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328
VGT + APE I+ K+DIWS G+ EL G P P L+ P
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP- 236
Query: 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
P LEG YS L + + A CL ++ RP E+++
Sbjct: 237 ------------PTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 270
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL---TSRFQA 200
+E+++E +++G EHPN+++L G + +++ E+M N ++ L +F
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNS----MPVMILTEFMENGALDSFLRLNDGQFTV 117
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260
+ + + A G+ YL E + RD + NIL++ K+SDFGL+R
Sbjct: 118 I----QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
Query: 261 DGLSHVSTAVVG---TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T+ +G I + APE I + T SD WS+G+ ++E+++ G RP
Sbjct: 171 NSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 130 IAVKQLSR---RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+AVK L+R R L + E+ L + HP+++KL + + ++ EY+
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF----FMVMEYVS 94
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
+ D++ + RL Q + Y H M ++ RD K N+LLD N
Sbjct: 95 GGELFDYICKHGRVEEMEARRL--FQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMN 149
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELI 304
AK++DFGL+ + SDG + T+ G+ YAAPE I +GRL + DIWS GV LY L+
Sbjct: 150 AKIADFGLSNM-MSDG-EFLRTS-CGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALL 205
Query: 305 TGRRPLD 311
G P D
Sbjct: 206 CGTLPFD 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
+ HP +V + + G ++ EY+ +++D + + + + +++ DA
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADAC 126
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA-VVGTI 274
+ L + H+ II RD K +NI++ K+ DFG+AR G S TA V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
Y +PE + + +SD++S G LYE++TG P + P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ VL + P + K G +D + I I EY+ S D L L
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEP---GPLDETQIA 107
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I ++ +GL YLH + I RD K++N+LL E KL+DFG+A G
Sbjct: 108 TILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRN 162
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328
VGT + APE I+ K+DIWS G+ EL G P P L+ P
Sbjct: 163 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP- 221
Query: 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
P LEG YS L + + A CL ++ RP E+++
Sbjct: 222 ------------PTLEGNYSKPLKEFVEA----CLNKEPSFRPTAKELLK 255
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+A+KQ+ +E + E++++ + P++VK G ++ + I + EY S
Sbjct: 57 VAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI----VMEYCGAGS 110
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
V D + R TL + I Q +GL YLH + I RD K+ NILL+ + +AKL
Sbjct: 111 VSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKL 166
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG+A G V+GT + APE IQ +DIWS G+ E+ G+ P
Sbjct: 167 ADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
Query: 310 LDRNRP 315
P
Sbjct: 225 YADIHP 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
+ HP +V + + G ++ EY+ +++D + + + + +++ DA
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADAC 126
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA-VVGTI 274
+ L + H+ II RD K +NIL+ K+ DFG+AR G S TA V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
Y +PE + + +SD++S G LYE++TG P + P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 130
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 131 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 184
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K LE
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 240
Query: 325 V 325
+
Sbjct: 241 M 241
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
++ + D ++ IA+K++ R + + E+ + ++H N+V+ +G +E+ G
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN---GF 93
Query: 177 QRLLIYEYMPNRSVQDHLTSRF------QATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
++ + E +P S+ L S++ + T+ + T+ GL YLH D QI+
Sbjct: 94 IKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLH---DNQIV 144
Query: 231 FRDFKSSNILLDEQWNA-KLSDFGLA-RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD K N+L++ K+SDFG + RL G++ + GT+ Y APE I G
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 289 Y--KSDIWSFGVFLYELITGRRPL 310
Y +DIWS G + E+ TG+ P
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV ++ ++ HPN+VKL E E LI EY V D+L + + R
Sbjct: 64 EVRIMKILNHPNIVKLF----EVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARS 118
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
K Q + + Y H+ +I+ RD K+ N+LLD N K++DFG + G
Sbjct: 119 KFRQIVS-AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLD 171
Query: 269 AVVGTIGYAAPEYIQTGRLTY-KSDIWSFGVFLYELITGRRPLD 311
A G YAAPE Q + + D+WS GV LY L++G P D
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 153 LGVVEHPNLVKLIGYC-AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L C +R + L++E++ ++ + +L + +P T +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
RGL +LH +++ RD K NIL+ KL+DFGLAR+ T+VV
Sbjct: 127 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319
T+ Y APE + D+WS G E+ R+PL R +Q
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
+ HP +V + + G ++ EY+ +++D + + + + +++ DA
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADAC 126
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA-VVGTI 274
+ L + H+ II RD K +NI++ K+ DFG+AR G S TA V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
Y +PE + + +SD++S G LYE++TG P + P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
+ HP +V + + G ++ EY+ +++D + + + + +++ DA
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADAC 126
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA-VVGTI 274
+ L + H+ II RD K +NI++ K+ DFG+AR G S TA V+GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
Y +PE + + +SD++S G LYE++TG P + P S
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL---TSRFQA 200
+E+++E +++G EHPN+++L G + +++ E+M N ++ L +F
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNS----MPVMILTEFMENGALDSFLRLNDGQFTV 115
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260
+ + + A G+ YL E + RD + NIL++ K+SDFGL+R
Sbjct: 116 I----QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
Query: 261 DGLSHVSTAVVG---TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T+ +G I + APE I + T SD WS+G+ ++E+++ G RP
Sbjct: 169 NSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 102/193 (52%), Gaps = 14/193 (7%)
Query: 126 KKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
K+ID+A+K L ++G + +E + E ++ +++P +V+LIG C + +L+ E
Sbjct: 362 KQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-----ALMLVME 415
Query: 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
+ L + + +P + ++ + G+ YL E + R+ + N+LL
Sbjct: 416 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVN 471
Query: 244 QWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
+ AK+SDFGL++ LG D +A + + APE I + + +SD+WS+GV ++E
Sbjct: 472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
Query: 303 LIT-GRRPLDRNR 314
++ G++P + +
Sbjct: 532 ALSYGQKPYKKMK 544
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 129 DIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK + + L ++ EV ++ V+ HPN+VKL E E L+ EY
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF----EVIETEKTLYLVMEYAS 96
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
V D+L + + R K Q + + Y H+ I+ RD K+ N+LLD N
Sbjct: 97 GGEVFDYLVAHGRMK-EKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELIT 305
K++DFG + + G+ YAAPE Q + + D+WS GV LY L++
Sbjct: 152 IKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 306 GRRPLD 311
G P D
Sbjct: 209 GSLPFD 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 153 LGVVEHPNLVKLIGYC-AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L C +R + L++E++ ++ + +L + +P T +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
RGL +LH +++ RD K NIL+ KL+DFGLAR+ T+VV
Sbjct: 127 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319
T+ Y APE + D+WS G E+ R+PL R +Q
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 129 DIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK + + L ++ EV ++ V+ HPN+VKL E E L+ EY
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF----EVIETEKTLYLVMEYAS 96
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
V D+L + + R K Q + + Y H+ I+ RD K+ N+LLD N
Sbjct: 97 GGEVFDYLVAHGRMK-EKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELIT 305
K++DFG + + G+ YAAPE Q + + D+WS GV LY L++
Sbjct: 152 IKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 306 GRRPLD 311
G P D
Sbjct: 209 GSLPFD 214
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 147 VTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWN 205
+ E VL + EHP L + +C + + + EY+ + H+ S + L
Sbjct: 65 MVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKFDLSRA 120
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSDG 262
T A + GL +LH I++RD K NILLD+ + K++DFG+ + LG +
Sbjct: 121 TF--YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 174
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
+ GT Y APE + + + D WSFGV LYE++ G+ P + E++L
Sbjct: 175 ----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF---HGQDEEELF 227
Query: 323 EWVR 326
+R
Sbjct: 228 HSIR 231
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 147 VTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWN 205
+ E VL + EHP L + +C + + + EY+ + H+ S + L
Sbjct: 66 MVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKFDLSRA 121
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSDG 262
T A + GL +LH I++RD K NILLD+ + K++DFG+ + LG +
Sbjct: 122 TF--YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK- 175
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
+ GT Y APE + + + D WSFGV LYE++ G+ P + E++L
Sbjct: 176 ----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF---HGQDEEELF 228
Query: 323 EWVR 326
+R
Sbjct: 229 HSIR 232
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 103
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 157
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 325 V 325
+
Sbjct: 214 M 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
+ HP +V + + G ++ EY+ +++D + + + + +++ DA
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADAC 143
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA-VVGTI 274
+ L + H+ II RD K +NI++ K+ DFG+AR G S TA V+GT
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317
Y +PE + + +SD++S G LYE++TG P + P S
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 130 IAVKQLSR---RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+AVK L+R R L + E+ L + HP+++KL + + ++ EY+
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF----FMVMEYVS 94
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
+ D++ + RL Q + Y H M ++ RD K N+LLD N
Sbjct: 95 GGELFDYICKHGRVEEMEARRL--FQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMN 149
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELI 304
AK++DFGL+ + SDG G+ YAAPE I +GRL + DIWS GV LY L+
Sbjct: 150 AKIADFGLSNM-MSDG--EFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALL 205
Query: 305 TGRRPLD 311
G P D
Sbjct: 206 CGTLPFD 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW---- 204
E +++ P +V+L Y +DD ++ EYMP + +L S + W
Sbjct: 119 ERDIMAFANSPWVVQLF-YAFQDDR---YLYMVMEYMPGGDLV-NLMSNYDVPEKWARFY 173
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ +A DA + ++H RD K N+LLD+ + KL+DFG +G+
Sbjct: 174 TAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 265 HVSTAVVGTIGYAAPEYIQT----GRLTYKSDIWSFGVFLYELITGRRPL 310
TA VGT Y +PE +++ G + D WS GVFLYE++ G P
Sbjct: 225 RCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 103
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 157
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 325 V 325
+
Sbjct: 214 M 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 153 LGVVEHPNLVKLIGYC-AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L EHPN+V+L C +R + L++E++ ++ + +L + +P T +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
RGL +LH +++ RD K NIL+ KL+DFGLAR+ T+VV
Sbjct: 127 FQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVV 180
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319
T+ Y APE + D+WS G E+ R+PL R +Q
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 103
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 157
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 325 V 325
+
Sbjct: 214 M 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 103
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 104 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 157
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+ P + K LE
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELEL 213
Query: 325 V 325
+
Sbjct: 214 M 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW---- 204
E +++ P +V+L Y +DD ++ EYMP + +L S + W
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDR---YLYMVMEYMPGGDLV-NLMSNYDVPEKWARFY 178
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ +A DA + ++H RD K N+LLD+ + KL+DFG +G+
Sbjct: 179 TAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 265 HVSTAVVGTIGYAAPEYIQT----GRLTYKSDIWSFGVFLYELITGRRPL 310
TA VGT Y +PE +++ G + D WS GVFLYE++ G P
Sbjct: 230 RCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 23/170 (13%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW---- 204
E +++ P +V+L Y +DD ++ EYMP + +L S + W
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDR---YLYMVMEYMPGGDLV-NLMSNYDVPEKWARFY 178
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ +A DA + ++H RD K N+LLD+ + KL+DFG +G+
Sbjct: 179 TAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 265 HVSTAVVGTIGYAAPEYIQT----GRLTYKSDIWSFGVFLYELITGRRPL 310
TA VGT Y +PE +++ G + D WS GVFLYE++ G P
Sbjct: 230 RCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 147 VTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLP 203
+TE +L + HP L +L C + +R + E++ + H+ + RF
Sbjct: 71 MTEKRILSLARNHPFLTQLF-CCFQTPDR---LFFVMEFVNGGDLMFHIQKSRRFDEA-- 124
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
R A + L +LH D II+RD K N+LLD + + KL+DFG+ + G +G+
Sbjct: 125 -RARF-YAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179
Query: 264 SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323
+ + GT Y APE +Q D W+ GV LYE++ G P + ++E L E
Sbjct: 180 T--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA---ENEDDLFE 234
Query: 324 WV 325
+
Sbjct: 235 AI 236
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 122
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 123 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 176
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
++ + VGT Y +PE +Q + +SDIWS G+ L E+ GR P+
Sbjct: 177 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 129 DIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK + + L ++ EV + V+ HPN+VKL E E L+ EY
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF----EVIETEKTLYLVXEYAS 96
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
V D+L + + R K Q + + Y H+ I+ RD K+ N+LLD N
Sbjct: 97 GGEVFDYLVAHGRXK-EKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADXN 151
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY-KSDIWSFGVFLYELIT 305
K++DFG + + A G YAAPE Q + + D+WS GV LY L++
Sbjct: 152 IKIADFGFSN---EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
Query: 306 GRRPLD 311
G P D
Sbjct: 209 GSLPFD 214
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 26/185 (14%)
Query: 140 LQGHKEWVTEVNVLGV--VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSR 197
LQ + W +E + ++H NL++ I ++ LI + S+ D+L
Sbjct: 48 LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN 107
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHE--------GMDFQIIFRDFKSSNILLDEQWNAKL 249
+ WN +A+ +RGL+YLHE G I RDFKS N+LL A L
Sbjct: 108 I---ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVL 164
Query: 250 SDFGLA---RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS------DIWSFGVFL 300
+DFGLA G G +H VGT Y APE ++ G + ++ D+++ G+ L
Sbjct: 165 ADFGLAVRFEPGKPPGDTH---GQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVL 220
Query: 301 YELIT 305
+EL++
Sbjct: 221 WELVS 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV ++ V+ HPN+VKL E E L+ EY V D+L + + R
Sbjct: 63 EVRIMKVLNHPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARA 117
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + +
Sbjct: 118 KFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLD 170
Query: 269 AVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELITGRRPLD 311
G+ YAAPE Q + + D+WS GV LY L++G P D
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E VL +++ P + + C + +R + EY+ + H+ + P
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDR---LYFVMEYVNGGDLMYHIQQVGKFKEP--Q 121
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+ A + + GL +LH+ II+RD K N++LD + + K++DFG+ + DG++
Sbjct: 122 AVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT-- 176
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
+ GT Y APE I D W++GV LYE++ G+ P D + E +L + +
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG---EDEDELFQSIM 233
Query: 327 PH 328
H
Sbjct: 234 EH 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
++ + D ++ IA+K++ R + + E+ + ++H N+V+ +G +E+ G
Sbjct: 23 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN---GF 79
Query: 177 QRLLIYEYMPNRSVQDHLTSRF------QATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
++ + E +P S+ L S++ + T+ + T+ GL YLH D QI+
Sbjct: 80 IKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLH---DNQIV 130
Query: 231 FRDFKSSNILLDEQWNA-KLSDFGLA-RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD K N+L++ K+SDFG + RL G++ + GT+ Y APE I G
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 289 Y--KSDIWSFGVFLYELITGRRPL 310
Y +DIWS G + E+ TG+ P
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV ++ ++ HPN+VKL E E LI EY V D+L + + R
Sbjct: 61 EVRIMKILNHPNIVKLF----EVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARS 115
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
K Q + + Y H+ +I+ RD K+ N+LLD N K++DFG + G
Sbjct: 116 KFRQIVS-AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---KLD 168
Query: 269 AVVGTIGYAAPEYIQTGRLTY-KSDIWSFGVFLYELITGRRPLD 311
G+ YAAPE Q + + D+WS GV LY L++G P D
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 129 DIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK + + L ++ EV ++ V+ HPN+VKL E E L+ EY
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF----EVIETEKTLYLVMEYAS 89
Query: 187 NRSVQDHLTSRFQATLPW----NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
V D+L + W R K Q + + Y H+ I+ RD K+ N+LLD
Sbjct: 90 GGEVFDYLVAH-----GWMKEKEARAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLD 140
Query: 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY-KSDIWSFGVFLY 301
N K++DFG + + G+ YAAPE Q + + D+WS GV LY
Sbjct: 141 ADMNIKIADFGFSN---EFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 197
Query: 302 ELITGRRPLD 311
L++G P D
Sbjct: 198 TLVSGSLPFD 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 98/230 (42%), Gaps = 29/230 (12%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ VL + P + + G + + +I EY+ S D L L
Sbjct: 67 EITVLSQCDSPYITRYFGSYL----KSTKLWIIMEYLGGGSALDLLKP---GPLEETYIA 119
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I ++ +GL YLH + I RD K++N+LL EQ + KL+DFG+A G
Sbjct: 120 TILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRN 174
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328
VGT + APE I+ +K+DIWS G+ EL G P P L+ P
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP- 233
Query: 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
P LEG++S + + A CL + + RP E+++
Sbjct: 234 ------------PTLEGQHSKPFKEFVEA----CLNKDPRFRPTAKELLK 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV ++ V+ HPN+VKL E E L+ EY V D+L + + R
Sbjct: 63 EVRIMKVLNHPNIVKLF----EVIETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARA 117
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + +
Sbjct: 118 KFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLD 170
Query: 269 AVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELITGRRPLD 311
G+ YAAPE Q + + D+WS GV LY L++G P D
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 140 LQGHKEWVTEVNVLGV--VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSR 197
+Q + W E V + ++H N+++ IG + LI + S+ D L +
Sbjct: 57 IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN 116
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHE-------GMDFQIIFRDFKSSNILLDEQWNAKLS 250
+ WN IA+ ARGLAYLHE G I RD KS N+LL A ++
Sbjct: 117 ---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
Query: 251 DFGLA---RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS------DIWSFGVFLY 301
DFGLA G S G +H VGT Y APE ++ G + ++ D+++ G+ L+
Sbjct: 174 DFGLALKFEAGKSAGDTH---GQVGTRRYMAPEVLE-GAINFQRDAFLRIDMYAMGLVLW 229
Query: 302 ELIT----GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337
EL + P+D E+++ + P L D ++ +
Sbjct: 230 ELASRCTAADGPVDEYMLPFEEEIGQ--HPSLEDMQEVVV 267
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 112
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 113 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 165
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + A VGT Y +PE + SD+W+ G +Y+L
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
Query: 304 ITGRRPL 310
+ G P
Sbjct: 226 VAGLPPF 232
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
++A++Q++ + + + E+ V+ ++PN+V + DE + + EY+
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV----VMEYLAGG 102
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S+ D +T + + + ++ + L +LH Q+I RD KS NILL + K
Sbjct: 103 SLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVK 156
Query: 249 LSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGR 307
L+DFG A++ P S ST +VGT + APE + K DIWS G+ E+I G
Sbjct: 157 LTDFGFCAQITPEQ--SKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 308 RP-LDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339
P L+ N ++ + P L + +K + I
Sbjct: 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 149 EVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
EV++L V HPN+++L + E L+++ M + D+LT + TL
Sbjct: 73 EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKET 126
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA-RLGPSDGLSHV 266
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P + L
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR-- 181
Query: 267 STAVVGTIGYAAPEYIQTGR------LTYKSDIWSFGVFLYELITGRRPL 310
+V GT Y APE I+ + D+WS GV +Y L+ G P
Sbjct: 182 --SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 33/248 (13%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPW 204
+ + E+ VL P +V G D E I E+M S+ L +P
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKK--AGRIPE 106
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 107 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 160
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
++ VGT Y +PE +Q + +SDIWS G+ L E+ GR P P + +LL++
Sbjct: 161 EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDY 217
Query: 325 V--RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV-VEVLN 381
+ P PKL S + + NKCL + R + ++ V
Sbjct: 218 IVNEP------------PPKLP---SAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 262
Query: 382 KIVDAAET 389
K DA E
Sbjct: 263 KRSDAEEV 270
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 129 DIAVK-----QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
++AVK QL+ LQ + EV ++ ++ HPN+VKL E E L+ E
Sbjct: 42 EVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKLF----EVIETEKTLYLVME 94
Query: 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
Y V D+L + + R K Q + Y H+ I+ RD K+ N+LLD
Sbjct: 95 YASGGEVFDYLVAHGRMK-EKEARAKFRQ-IVSAVQYCHQKY---IVHRDLKAENLLLDG 149
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY-KSDIWSFGVFLYE 302
N K++DFG + + + G+ YAAPE Q + + D+WS GV LY
Sbjct: 150 DMNIKIADFGFSN---EFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYT 206
Query: 303 LITGRRPLD 311
L++G P D
Sbjct: 207 LVSGSLPFD 215
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 130 IAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+A+K +SR+ L+ H E++ L ++ HP+++KL + +++ EY
Sbjct: 37 VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI----VMVIEY-A 91
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
+ D++ + + T R Q + Y H +I+ RD K N+LLD+ N
Sbjct: 92 GGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLN 146
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY--KSDIWSFGVFLYELI 304
K++DFGL+ + +DG + + T+ G+ YAAPE I G+L + D+WS G+ LY ++
Sbjct: 147 VKIADFGLSNIM-TDG-NFLKTS-CGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVML 202
Query: 305 TGRRPLD 311
GR P D
Sbjct: 203 VGRLPFD 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 48/283 (16%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN- 187
+AVK L ++ E ++ ++PN+VKL+G CA G L++EYM
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA----VGKPMCLLFEYMAYG 135
Query: 188 ------RSVQDH---------LTSRFQATLP------WNTRLKIAQDAARGLAYLHEGMD 226
RS+ H L++R + + P +L IA+ A G+AYL E
Sbjct: 136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-- 193
Query: 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR 286
+ + RD + N L+ E K++DFGL+R S I + PE I R
Sbjct: 194 -KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR 252
Query: 287 LTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEG 345
T +SD+W++GV L+E+ + G +P + ++++ +VR D + LE
Sbjct: 253 YTTESDVWAYGVVLWEIFSYGLQPYYG---MAHEEVIYYVR----DGNILACPENCPLE- 304
Query: 346 KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAAE 388
L + C ++ RP + +L ++ + AE
Sbjct: 305 ---------LYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ + +++P++V G+ +DD ++ E RS+ + L R +A R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267
+ Q +G+ YLH ++I RD K N+ L++ + K+ DFGLA DG
Sbjct: 146 YFMRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERK 199
Query: 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ DIWS G LY L+ G+ P +
Sbjct: 200 KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 149 EVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
EV++L V HPN+++L + E L+++ M + D+LT + TL
Sbjct: 60 EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKET 113
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA-RLGPSDGLSHV 266
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P + L V
Sbjct: 114 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 267 STAVVGTIGYAAPEYIQTGR------LTYKSDIWSFGVFLYELITGRRPL 310
GT Y APE I+ + D+WS GV +Y L+ G P
Sbjct: 171 C----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 149 EVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
EV++L V HPN+++L + E L+++ M + D+LT + TL
Sbjct: 73 EVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKET 126
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA-RLGPSDGLSHV 266
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P + L V
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 267 STAVVGTIGYAAPEYIQTGR------LTYKSDIWSFGVFLYELITGRRPL 310
GT Y APE I+ + D+WS GV +Y L+ G P
Sbjct: 184 C----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
++A++Q++ + + + E+ V+ ++PN+V + DE + + EY+
Sbjct: 48 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV----VMEYLAGG 103
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S+ D +T + + + ++ + L +LH Q+I RD KS NILL + K
Sbjct: 104 SLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVK 157
Query: 249 LSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGR 307
L+DFG A++ P + +VGT + APE + K DIWS G+ E+I G
Sbjct: 158 LTDFGFCAQITPEQS---KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
Query: 308 RP-LDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339
P L+ N ++ + P L + +K + I
Sbjct: 215 PPYLNENPLRALYLIATNGTPELQNPEKLSAIF 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ + +++P++V G+ +DD ++ E RS+ + L R +A R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267
+ Q +G+ YLH ++I RD K N+ L++ + K+ DFGLA DG
Sbjct: 146 YFMRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERK 199
Query: 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ DIWS G LY L+ G+ P +
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
++A++Q++ + + + E+ V+ ++PN+V + DE + + EY+
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV----VMEYLAGG 102
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S+ D +T + + + ++ + L +LH Q+I RD KS NILL + K
Sbjct: 103 SLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVK 156
Query: 249 LSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGR 307
L+DFG A++ P + +VGT + APE + K DIWS G+ E+I G
Sbjct: 157 LTDFGFCAQITPEQS---KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 308 RP-LDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339
P L+ N ++ + P L + +K + I
Sbjct: 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNV-LGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
IAVKQ+ R G + +K + +++V L + P +V+ G + + I L+
Sbjct: 53 IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM------ 106
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
+ + L R Q +P K+ + L YL E +I RD K SNILLDE+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQI 164
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-----YKSDIWSFGVFLYE 302
KL DFG++ D S G Y APE I T ++D+WS G+ L E
Sbjct: 165 KLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 303 LITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD---PKLEGKYSIKLAQKLAAVA 359
L TG+ P + TD + T +L P L G + + +
Sbjct: 222 LATGQFPYKNCK---------------TDFEVLTKVLQEEPPLLPG--HMGFSGDFQSFV 264
Query: 360 NKCLARQAKGRPKMSEVVE 378
CL + + RPK ++++E
Sbjct: 265 KDCLTKDHRKRPKYNKLLE 283
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 56 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 110
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ + L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 111 RFYGAEIVS-ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 165 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHERLFELI- 220
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 221 --LMEEIRFPRTLSPE 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 114
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 115 KNGCLLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 167
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + + VGT Y +PE + + SD+W+ G +Y+L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQL 227
Query: 304 ITGRRPL 310
+ G P
Sbjct: 228 VAGLPPF 234
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 15/213 (7%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
++A++Q++ + + + E+ V+ ++PN+V + DE + + EY+
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV----VMEYLAGG 102
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S+ D +T + + + ++ + L +LH Q+I RD KS NILL + K
Sbjct: 103 SLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVK 156
Query: 249 LSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGR 307
L+DFG A++ P + +VGT + APE + K DIWS G+ E+I G
Sbjct: 157 LTDFGFCAQITPEQS---KRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
Query: 308 RP-LDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339
P L+ N ++ + P L + +K + I
Sbjct: 214 PPYLNENPLRALYLIATNGTPELQNPEKLSAIF 246
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 117
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQD---AARGLAY---LHEGMDF----QIIFRDFKSS 237
++ +L S+ +P+ T + +D + Y + +GM+F + I RD +
Sbjct: 118 GNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 177
Query: 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
NILL E+ K+ DFGLAR D + + APE I T +SD+WSFG
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 298 VFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIKL 351
V L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----------- 286
Query: 352 AQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 287 ----------CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ + L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 108 RFYGAEIVS-ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHERLFELI- 217
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 218 --LMEEIRFPRTLSPE 231
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 108 RFYGAE-IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHERLFELI- 217
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 218 --LMEEIRFPRTLSPE 231
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ + +++P++V G+ +DD ++ E RS+ + L R +A R
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 145
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267
+ Q +G+ YLH ++I RD K N+ L++ + K+ DFGLA DG
Sbjct: 146 YFMRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERK 199
Query: 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ DIWS G LY L+ G+ P +
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 37 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 92
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 93 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 145
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 146 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 205
Query: 304 ITGRRPL 310
+ G P
Sbjct: 206 VAGLPPF 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ + +++P++V G+ +DD ++ E RS+ + L R +A R
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDD----FVYVVLEICRRRSLLE-LHKRRKAVTEPEAR 129
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267
+ Q +G+ YLH ++I RD K N+ L++ + K+ DFGLA DG
Sbjct: 130 YFMRQ-TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERK 183
Query: 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ DIWS G LY L+ G+ P +
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 17/167 (10%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E++++ ++H N+V+L ++ + L++E+M N ++ ++ SR P
Sbjct: 51 IREISLMKELKHENIVRLYDVIHTEN----KLTLVFEFMDN-DLKKYMDSRTVGNTPRGL 105
Query: 207 RLKIAQ----DAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262
L + + +GLA+ HE +I+ RD K N+L++++ KL DFGLAR
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGIP 161
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
++ S+ VV T+ Y AP+ + R TY + DIWS G L E+ITG+
Sbjct: 162 VNTFSSEVV-TLWYRAPDVLMGSR-TYSTSIDIWSCGCILAEMITGK 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 89
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 90 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 142
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 143 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 202
Query: 304 ITGRRPL 310
+ G P
Sbjct: 203 VAGLPPF 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 108 RFYGAE-IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHERLFELI- 217
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 218 --LMEEIRFPRTLSPE 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 90
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 91 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 143
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203
Query: 304 ITGRRPL 310
+ G P
Sbjct: 204 VAGLPPF 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 91
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 92 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 144
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 145 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 204
Query: 304 ITGRRPL 310
+ G P
Sbjct: 205 VAGLPPF 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 108 RFYGAE-IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHERLFELI- 217
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 218 --LMEEIRFPRTLSPE 231
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 111
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 112 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 164
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 165 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 224
Query: 304 ITGRRPL 310
+ G P
Sbjct: 225 VAGLPPF 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 115
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 116 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 168
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 169 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 228
Query: 304 ITGRRPL 310
+ G P
Sbjct: 229 VAGLPPF 235
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 193 HLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252
++ S +P KI + L +L E + +II RD K SNILLD N KL DF
Sbjct: 113 YVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDF 170
Query: 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ--TGRLTY--KSDIWSFGVFLYELITGRR 308
G++ D ++ A G Y APE I R Y +SD+WS G+ LYEL TGR
Sbjct: 171 GISG-QLVDSIAKTRDA--GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF 227
Query: 309 PLDRNRPKSEQKLLEW--VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQ 366
P PK W V LT K P+L + + N CL +
Sbjct: 228 PY----PK-------WNSVFDQLTQVVKGD---PPQLSNSEEREFSPSFINFVNLCLTKD 273
Query: 367 AKGRPKMSEVVE 378
RPK E+++
Sbjct: 274 ESKRPKYKELLK 285
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 53 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 108 RFYGAE-IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHERLFELI- 217
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 218 --LMEEIRFPRTLSPE 231
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 96
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 97 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 149
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 150 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 209
Query: 304 ITGRRPL 310
+ G P
Sbjct: 210 VAGLPPF 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 112
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 113 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 165
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
Query: 304 ITGRRPL 310
+ G P
Sbjct: 226 VAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 112
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 113 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 165
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
Query: 304 ITGRRPL 310
+ G P
Sbjct: 226 VAGLPPF 232
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 112
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 113 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 165
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 166 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 225
Query: 304 ITGRRPL 310
+ G P
Sbjct: 226 VAGLPPF 232
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179
T +KI++AVK + +KE +++E ++ ++HP++VKLIG E+ I L
Sbjct: 46 TNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMEL 105
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
Y + H R + +L T + + + +AYL + RD NI
Sbjct: 106 YPYGEL------GHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNI 156
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
L+ KL DFGL+R + S + I + +PE I R T SD+W F V
Sbjct: 157 LVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVC 215
Query: 300 LYELIT-GRRPL 310
++E+++ G++P
Sbjct: 216 MWEILSFGKQPF 227
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
VTE VL HP L L Y + +R + EY + HL SR +
Sbjct: 58 VTESRVLQNTRHPFLTAL-KYAFQTHDR---LCFVMEYANGGELFFHL-SRERVFTEERA 112
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R A+ L YLH +++RD K N++LD+ + K++DFGL + G SDG +
Sbjct: 113 RFYGAE-IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 166
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
GT Y APE ++ D W GV +YE++ GR P + ++L E +
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHERLFELI- 222
Query: 327 PHLTDAKKFTMILDPK 342
L + +F L P+
Sbjct: 223 --LMEEIRFPRTLSPE 236
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
++A++Q++ + + + E+ V+ ++PN+V + DE + + EY+
Sbjct: 48 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV----VMEYLAGG 103
Query: 189 SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248
S+ D +T + + + ++ + L +LH Q+I R+ KS NILL + K
Sbjct: 104 SLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVK 157
Query: 249 LSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGR 307
L+DFG A++ P S ST +VGT + APE + K DIWS G+ E+I G
Sbjct: 158 LTDFGFCAQITPEQ--SKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
Query: 308 RP-LDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339
P L+ N ++ + P L + +K + I
Sbjct: 215 PPYLNENPLRALYLIATNGTPELQNPEKLSAIF 247
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 25 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 76
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 77 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 130
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 131 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 190
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 191 SCGIVLTAMLAGELPWDQ 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 114
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 115 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 167
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
Query: 304 ITGRRPL 310
+ G P
Sbjct: 228 VAGLPPF 234
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 114
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 115 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 167
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
Query: 304 ITGRRPL 310
+ G P
Sbjct: 228 VAGLPPF 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 114
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 115 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 167
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
Query: 304 ITGRRPL 310
+ G P
Sbjct: 228 VAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 115
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 116 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 168
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 169 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 228
Query: 304 ITGRRPL 310
+ G P
Sbjct: 229 VAGLPPF 235
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 24/259 (9%)
Query: 128 IDIAVKQLSRRGLQGHK---EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEY 184
+ +A+K++ L K + + E+++L + HPN++K ED+E I L
Sbjct: 58 VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 117
Query: 185 MPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
+R ++ H + + +P T K L ++H +++ RD K +N+ +
Sbjct: 118 DLSRMIK-HFKKQ-KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITAT 172
Query: 245 WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304
KL D GL R S + + ++VGT Y +PE I +KSDIWS G LYE+
Sbjct: 173 GVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 230
Query: 305 TGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLA 364
+ P ++ + KK P L + +++L + N C+
Sbjct: 231 ALQSPFYGDKMNL-----------YSLCKKIEQCDYPPLPSDH---YSEELRQLVNMCIN 276
Query: 365 RQAKGRPKMSEVVEVLNKI 383
+ RP ++ V +V ++
Sbjct: 277 PDPEKRPDVTYVYDVAKRM 295
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179
T +KI++AVK + +KE +++E ++ ++HP++VKLIG E+ I L
Sbjct: 30 TNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMEL 89
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
Y + H R + +L T + + + +AYL + RD NI
Sbjct: 90 YPYGEL------GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNI 140
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
L+ KL DFGL+R + S + I + +PE I R T SD+W F V
Sbjct: 141 LVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVC 199
Query: 300 LYELIT-GRRPL 310
++E+++ G++P
Sbjct: 200 MWEILSFGKQPF 211
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 114
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 115 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 167
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227
Query: 304 ITGRRPL 310
+ G P
Sbjct: 228 VAGLPPF 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 111
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 112 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 164
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 165 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 224
Query: 304 ITGRRPL 310
+ G P
Sbjct: 225 VAGLPPF 231
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 126 KKIDIAVKQLSRRGLQGHKE---WVTEVNVL-GVVEHPNLVKL-IGYCAEDDERGIQRLL 180
+++ AVK L ++ + KE ++E NVL V+HP LV L + D +
Sbjct: 62 EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-----KLYF 116
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
+ +Y+ + HL R + L R A + A L YLH I++RD K NIL
Sbjct: 117 VLDYINGGELFYHL-QRERCFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENIL 171
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVST--AVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
LD Q + L+DFGL + + + H ST GT Y APE + D W G
Sbjct: 172 LDSQGHIVLTDFGLCK----ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGA 227
Query: 299 FLYELITGRRPL-DRNRPKSEQKLLE---WVRPHLTDAKKFTM 337
LYE++ G P RN + +L ++P++T++ + +
Sbjct: 228 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLL 270
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 117
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 118 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 170
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 171 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 230
Query: 304 ITGRRPL 310
+ G P
Sbjct: 231 VAGLPPF 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EYMP + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYMPGGDMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q K++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 118 IRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177
+ E++ + +A K + RG++ +E E++V+ ++H NL++L Y A + + I
Sbjct: 105 VHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL--YDAFESKNDI- 161
Query: 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237
+L+ EY+ + D + +T L + Q G+ ++H+ I+ D K
Sbjct: 162 -VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-ICEGIRHMHQ---MYILHLDLKPE 216
Query: 238 NILL--DEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294
NIL + K+ DFGLAR P + L GT + APE + +++ +D+W
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPREKLK----VNFGTPEFLAPEVVNYDFVSFPTDMW 272
Query: 295 SFGVFLYELITGRRPL 310
S GV Y L++G P
Sbjct: 273 SVGVIAYMLLSGLSPF 288
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179
T +KI++AVK + +KE +++E ++ ++HP++VKLIG E+ I L
Sbjct: 34 TNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMEL 93
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
Y + H R + +L T + + + +AYL + RD NI
Sbjct: 94 YPYGEL------GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNI 144
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
L+ KL DFGL+R + S + I + +PE I R T SD+W F V
Sbjct: 145 LVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVC 203
Query: 300 LYELIT-GRRPL 310
++E+++ G++P
Sbjct: 204 MWEILSFGKQPF 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ L + H ++ +L E + ++ EY P + D++ S+ + + TR
Sbjct: 57 TEIEALKNLRHQHICQLYHVL----ETANKIFMVLEYCPGGELFDYIISQDRLS-EEETR 111
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267
+ Q +AY+H RD K N+L DE KL DFGL + H+
Sbjct: 112 VVFRQ-IVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167
Query: 268 TAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELITGRRPLD 311
T G++ YAAPE IQ L ++D+WS G+ LY L+ G P D
Sbjct: 168 TC-CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EYMP + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYMPGGDMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q K++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
S G+ L ++ G P D+ S Q+ +W
Sbjct: 192 SCGIVLTAMLAGELPWDQPS-DSXQEYSDW 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)
Query: 129 DIAVKQLSRRGL--QGHKEWVT-EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ A+K L +R + + +VT E +V+ ++HP VKL + +DDE+ L Y
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYA 114
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
N + ++ F T TR A+ + L YLH II RD K NILL+E
Sbjct: 115 KNGELLKYIRKIGSFDETC---TRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNE 167
Query: 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
+ +++DFG A++ + + VGT Y +PE + SD+W+ G +Y+L
Sbjct: 168 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQL 227
Query: 304 ITGRRPL 310
+ G P
Sbjct: 228 VAGLPPF 234
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ +L ++HPN+VKL+ DD +++E + V + T + L +
Sbjct: 86 EIAILKKLDHPNVVKLVEVL--DDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQAR 140
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA-RLGPSDGLSHVS 267
QD +G+ YLH +II RD K SN+L+ E + K++DFG++ SD L
Sbjct: 141 FYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL---L 194
Query: 268 TAVVGTIGYAAPEYIQTGRLTYKS---DIWSFGVFLYELITGRRPLDRNR 314
+ VGT + APE + R + D+W+ GV LY + G+ P R
Sbjct: 195 SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 27 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 78
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 79 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 132
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 133 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 193 SCGIVLTAMLAGELPWDQ 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP-------NRSVQDHLTSR 197
E + E NV+ +++P +V++IG C + E + + + E P NR V+D
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKD----- 468
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR- 256
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++
Sbjct: 469 -------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 518
Query: 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
L + T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 26/226 (11%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWV-TEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V+ + E + K+ AVK + ++ L+G + + E+ VL ++H N+V L ED
Sbjct: 38 VVLAEEKATGKL-FAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL-----EDIYES 91
Query: 176 IQRL-LIYEYMPNRSVQDHLTSR-FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
L L+ + + + D + + F +T ++ DA + YLH I+ RD
Sbjct: 92 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLHR---MGIVHRD 145
Query: 234 FKSSNILL---DEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYK 290
K N+L DE+ +SDFGL+++ +G V + GT GY APE + +
Sbjct: 146 LKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKA 202
Query: 291 SDIWSFGVFLYELITGRRPL-DRNRPKSEQKLL----EWVRPHLTD 331
D WS GV Y L+ G P D N K +++L E+ P+ D
Sbjct: 203 VDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDD 248
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP-------NRSVQDHLTSR 197
E + E NV+ +++P +V++IG C + E + + + E P NR V+D
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKD----- 126
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR- 256
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++
Sbjct: 127 -------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 176
Query: 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
L + T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 177 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP-------NRSVQDHLTSR 197
E + E NV+ +++P +V++IG C + E + + + E P NR V+D
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKD----- 126
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR- 256
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++
Sbjct: 127 -------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 176
Query: 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
L + T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 177 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E VL + P + + C + +R + EY+ + H+ RF+
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDLMYHIQQVGRFKEP--- 442
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ A + A GL +L II+RD K N++LD + + K++DFG+ + DG++
Sbjct: 443 -HAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
+ GT Y APE I D W+FGV LYE++ G+ P + + E +L +
Sbjct: 499 --TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG---EDEDELFQS 553
Query: 325 VRPH 328
+ H
Sbjct: 554 IMEH 557
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL----IYEYMP-NRSVQDHLTSRFQ 199
E + E NV+ +++P +V++IG C + + + + +Y+ NR V+D
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------- 116
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG 258
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++ L
Sbjct: 117 -----KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP-------NRSVQDHLTSR 197
E + E NV+ +++P +V++IG C + E + + + E P NR V+D
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKD----- 124
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR- 256
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++
Sbjct: 125 -------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 174
Query: 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
L + T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 175 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 116
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAY---LHEGMDF----QIIFRDFKSSNIL 240
++ +L S+ +P+ K + Y + +GM+F + I RD + NIL
Sbjct: 117 GNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNIL 176
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFL 300
L E+ K+ DFGLAR D + + APE I T +SD+WSFGV L
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 301 YELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIKLAQK 354
+E+ + G P + E ++L E R P T + + +LD
Sbjct: 237 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-------------- 282
Query: 355 LAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 283 -------CWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL----IYEYMP-NRSVQDHLTSRFQ 199
E + E NV+ +++P +V++IG C + + + + +Y+ NR V+D
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------- 106
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG 258
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++ L
Sbjct: 107 -----KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL----IYEYMP-NRSVQDHLTSRFQ 199
E + E NV+ +++P +V++IG C + + + + +Y+ NR V+D
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------- 104
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG 258
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++ L
Sbjct: 105 -----KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 156
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP-------NRSVQDHLTSR 197
E + E NV+ +++P +V++IG C + E + + + E P NR V+D
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKD----- 469
Query: 198 FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR- 256
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++
Sbjct: 470 -------KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 519
Query: 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
L + T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 520 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL----IYEYMP-NRSVQDHLTSRFQ 199
E + E NV+ +++P +V++IG C + + + + +Y+ NR V+D
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------- 110
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG 258
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++ L
Sbjct: 111 -----KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E VL + P + + C + +R + EY+ + H+ RF+
Sbjct: 68 MVEKRVLALPGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDLMYHIQQVGRFKEP--- 121
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ A + A GL +L II+RD K N++LD + + K++DFG+ + DG++
Sbjct: 122 -HAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
+ GT Y APE I D W+FGV LYE++ G+ P + + E +L +
Sbjct: 178 --TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG---EDEDELFQS 232
Query: 325 VRPH 328
+ H
Sbjct: 233 IMEH 236
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 117 VIRSTEDSHKKIDIAVKQLS-RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
V R TE++ +AVK + +R + + E+ + ++ H N+VK G+ E +
Sbjct: 26 VNRVTEEA-----VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN--- 77
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235
IQ L + EY + D + P R G+ YLH I RD K
Sbjct: 78 IQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIK 131
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIW 294
N+LLDE+ N K+SDFGLA + + + + GT+ Y APE ++ + D+W
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVW 191
Query: 295 SFGVFLYELITGRRPLDR 312
S G+ L ++ G P D+
Sbjct: 192 SCGIVLTAMLAGELPWDQ 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL----IYEYMP-NRSVQDHLTSRFQ 199
E + E NV+ +++P +V++IG C + + + + +Y+ NR V+D
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD------- 110
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG 258
+++ + G+ YL E + RD + N+LL Q AK+SDFGL++ L
Sbjct: 111 -----KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
+ T + + APE I + + KSD+WSFGV ++E + G++P
Sbjct: 163 ADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 92
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 93 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 143
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT-IGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P + +V + APE ++T ++
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 203
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 204 ASDTWMFGVTLWEMFTYGQEP 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 27 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 86
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 87 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 137
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT-IGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P + +V + APE ++T ++
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 197
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 198 ASDTWMFGVTLWEMFTYGQEP 218
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 40/283 (14%)
Query: 36 SSASNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELK 93
S N + + ++S EF ++ DF ES ++NT A L Q F +K
Sbjct: 19 SHMGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIK 68
Query: 94 T-ATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNV 152
T T +F R +++ +H + I KQ + L+ + + E +
Sbjct: 69 TLGTGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRI 115
Query: 153 LGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQ 212
L V P LVKL + +D+ ++ EY+P + HL + + P + R AQ
Sbjct: 116 LQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ 170
Query: 213 DAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG 272
YLH +I+RD K N+L+D+Q +++DFG A+ + + + G
Sbjct: 171 -IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCG 221
Query: 273 TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
T Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 27 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 86
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 87 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 137
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT-IGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P + +V + APE ++T ++
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 197
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 198 ASDTWMFGVTLWEMFTYGQEP 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 20/173 (11%)
Query: 143 HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSR--FQA 200
H+E E+++L ++HPN++KL + +D++ L+ E+ + + + +R F
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKL--FDVFEDKKYF--YLVTEFYEGGELFEQIINRHKFDE 145
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ---WNAKLSDFGLARL 257
N I + G+ YLH+ I+ RD K NILL+ + N K+ DFGL+
Sbjct: 146 CDAAN----IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
D + +GT Y APE ++ + K D+WS GV +Y L+ G P
Sbjct: 199 FSKD---YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 83 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 133
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT-IGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P + +V + APE ++T ++
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEP 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 83 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 133
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT-IGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P + +V + APE ++T ++
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEP 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 130 IAVKQLSRRGLQGHKEW---VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+A+K++S G Q +++W + EV L + HPN ++ G C + L+ EY
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHTA---WLVMEYCL 98
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
S D L + L + A +GLAYLH +I RD K+ NILL E
Sbjct: 99 G-SASD-LLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGL 153
Query: 247 AKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYI---QTGRLTYKSDIWSFGVFLYE 302
KL DFG A + P++ VGT + APE I G+ K D+WS G+ E
Sbjct: 154 VKLGDFGSASIMAPANXF-------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 303 LITGRRPL 310
L + PL
Sbjct: 207 LAERKPPL 214
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 130 IAVKQLSRRGLQGHKEW---VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+A+K++S G Q +++W + EV L + HPN ++ G C + L+ EY
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHTA---WLVMEYCL 137
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
S D L + L + A +GLAYLH +I RD K+ NILL E
Sbjct: 138 G-SASD-LLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGL 192
Query: 247 AKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYI---QTGRLTYKSDIWSFGVFLYE 302
KL DFG A + P++ VGT + APE I G+ K D+WS G+ E
Sbjct: 193 VKLGDFGSASIMAPANXF-------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245
Query: 303 LITGRRPL 310
L + PL
Sbjct: 246 LAERKPPL 253
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR-LLIYEYMPNRSVQDHLT-SRFQAT 201
+E+++E + HPN+++L+G C E +GI + ++I +M + +L SR +
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 202 ---LPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258
+P T LK D A G+ YL + + RD + N +L + ++DFGL++
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP 309
S + + A E + T KSD+W+FGV ++E+ T G P
Sbjct: 198 YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 116
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAY---LHEGMDF----QIIFRDFKSSNIL 240
++ +L S+ +P+ K + Y + +GM+F + I RD + NIL
Sbjct: 117 GNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNIL 176
Query: 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFL 300
L E+ K+ DFGLAR D + + APE I T +SD+WSFGV L
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 301 YELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIKLAQK 354
+E+ + G P + E ++L E R P T + + +LD
Sbjct: 237 WEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD-------------- 282
Query: 355 LAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 283 -------CWHGEPSQRPTFSELVEHLGNLLQA 307
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL Y +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL Y +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL Y +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
+G + +I EY+ S D L + T LK + +GL YLH + I RD
Sbjct: 92 KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHSE---KKIHRD 145
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K++N+LL EQ + KL+DFG+A G VGT + APE IQ K+DI
Sbjct: 146 IKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 294 WSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQ 353
WS G+ EL G P P L+ P P L G ++ +
Sbjct: 204 WSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PTLVGDFTKSFKE 250
Query: 354 KLAAVANKCLARQAKGRPKMSEVVE 378
+ A CL + RP E+++
Sbjct: 251 FIDA----CLNKDPSFRPTAKELLK 271
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 92
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 93 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 143
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGP-SDGLSHVSTAVVGTIGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P +D + + APE ++T ++
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSH 203
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 204 ASDTWMFGVTLWEMFTYGQEP 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 211 AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAV 270
A + GL ++H +++RD K +NILLDE + ++SD GLA D A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 350
Query: 271 VGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQKL 321
VGT GY APE +Q G + Y S D +S G L++L+ G P +++ K + ++
Sbjct: 351 VGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 211 AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAV 270
A + GL ++H +++RD K +NILLDE + ++SD GLA D A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 350
Query: 271 VGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQKL 321
VGT GY APE +Q G + Y S D +S G L++L+ G P +++ K + ++
Sbjct: 351 VGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 118
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 119 GNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 211 AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAV 270
A + GL ++H +++RD K +NILLDE + ++SD GLA D A
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 349
Query: 271 VGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQKL 321
VGT GY APE +Q G + Y S D +S G L++L+ G P +++ K + ++
Sbjct: 350 VGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 211 AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAV 270
A + GL ++H +++RD K +NILLDE + ++SD GLA D A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHAS 350
Query: 271 VGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQKL 321
VGT GY APE +Q G + Y S D +S G L++L+ G P +++ K + ++
Sbjct: 351 VGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 117 VIRSTE---DSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170
V+R E S K + +AVK L L + +++ EVN + ++H NL++L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230
+ ++ E P S+ D L + Q T + A A G+ YL + I
Sbjct: 83 PPMK-----MVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFI 133
Query: 231 FRDFKSSNILLDEQWNAKLSDFGLARLGP-SDGLSHVSTAVVGTIGYAAPEYIQTGRLTY 289
RD + N+LL + K+ DFGL R P +D + + APE ++T ++
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 290 KSDIWSFGVFLYELIT-GRRP 309
SD W FGV L+E+ T G+ P
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEP 214
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q K++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
L YLH + +++RD K N++LD+ + K++DFGL + G DG + GT Y
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 318
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336
APE ++ D W GV +YE++ GR P + +KL E + L + +F
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHEKLFELI---LMEEIRFP 372
Query: 337 MILDPK 342
L P+
Sbjct: 373 RTLGPE 378
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 107
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 108 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 164
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 165 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 220 HQSDVWSFGVLLWEIFT 236
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
L YLH + +++RD K N++LD+ + K++DFGL + G DG + GT Y
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 315
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336
APE ++ D W GV +YE++ GR P + +KL E + L + +F
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHEKLFELI---LMEEIRFP 369
Query: 337 MILDPK 342
L P+
Sbjct: 370 RTLGPE 375
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+++D+Q K++DFGLA+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF ES ++NT A L Q F +KT
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIKTLG 51
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 52 TGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 98
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+P + HL + + P + R AQ
Sbjct: 99 VNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 152
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 204
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L ++ ++E NVL V HP+++KL G C++D LLI EY
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG----PLLLIVEYAKYG 111
Query: 189 SVQ-------------------------DHLTSRFQATLPWNTRLKIAQDAARGLAYLHE 223
S++ DH R L + A ++G+ YL E
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER---ALTMGDLISFAWQISQGMQYLAE 168
Query: 224 GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYI 282
+++ RD + NIL+ E K+SDFGL+R + D S + + + A E +
Sbjct: 169 ---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI-PVKWMAIESL 224
Query: 283 QTGRLTYKSDIWSFGVFLYELIT 305
T +SD+WSFGV L+E++T
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 34/240 (14%)
Query: 150 VNVLGVVEHPNLVKLIG-YCAEDDERGIQRL-----LIYEYMPNRSVQDHLTSRFQATLP 203
VN+LG H V +I YC D R L Y Y P+ + ++ L+SR
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR------ 166
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
L + A+G+A+L I RD + N+LL AK+ DFGLAR +D
Sbjct: 167 --DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 264 SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLL 322
V + + APE I T +SD+WS+G+ L+E+ + G P
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY------------ 269
Query: 323 EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382
P + KF ++ + + + ++ C A + RP ++ L +
Sbjct: 270 ----PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L ++ ++E NVL V HP+++KL G C++D LLI EY
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG----PLLLIVEYAKYG 111
Query: 189 SVQ-------------------------DHLTSRFQATLPWNTRLKIAQDAARGLAYLHE 223
S++ DH R L + A ++G+ YL E
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER---ALTMGDLISFAWQISQGMQYLAE 168
Query: 224 GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYI 282
+++ RD + NIL+ E K+SDFGL+R + D S + + + A E +
Sbjct: 169 ---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESL 224
Query: 283 QTGRLTYKSDIWSFGVFLYELIT 305
T +SD+WSFGV L+E++T
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 111
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 112 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 168
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 169 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 224 HQSDVWSFGVLLWEIFT 240
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF ES ++NT A L Q F +KT
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIKTLG 51
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 52 TGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 98
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+P + HL + + P + R AQ
Sbjct: 99 VNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 152
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 204
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF ES ++NT A L Q F +KT
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIKTLG 51
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 52 TGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 98
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY P + HL + + P + R AQ
Sbjct: 99 VNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 152
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+++D+Q K++DFG A+ + + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGRTWXLCGTPE 204
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 118
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 119 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 110
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 111 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 167
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 168 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 223 HQSDVWSFGVLLWEIFT 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ ++ +EHP LV L Y +D+E ++ + + ++ HL +L
Sbjct: 65 ELQIMQGLEHPFLVNL-WYSFQDEE---DMFMVVDLLLGGDLRYHLQQNVHFK-EETVKL 119
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I + L YL +II RD K NILLDE + ++DF +A + P + + ++T
Sbjct: 120 FICE-LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITT 173
Query: 269 AVVGTIGYAAPEYIQTGR---LTYKSDIWSFGVFLYELITGRRP 309
+ GT Y APE + + ++ D WS GV YEL+ GRRP
Sbjct: 174 -MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 118
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 119 GNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF ES ++NT A L Q F +KT
Sbjct: 2 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIKTLG 51
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 52 TGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 98
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+P + HL + + P + R AQ
Sbjct: 99 VNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 152
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 204
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
L YLH + +++RD K N++LD+ + K++DFGL + G DG + GT Y
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 176
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336
APE ++ D W GV +YE++ GR P + +KL E + L + +F
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHEKLFELI---LMEEIRFP 230
Query: 337 MILDPK 342
L P+
Sbjct: 231 RTLGPE 236
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 92 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 147
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 204
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR G + + + PE G T
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT 264
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 265 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 309
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 310 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 355
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
L YLH + +++RD K N++LD+ + K++DFGL + G DG + GT Y
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 177
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336
APE ++ D W GV +YE++ GR P + +KL E + L + +F
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHEKLFELI---LMEEIRFP 231
Query: 337 MILDPK 342
L P+
Sbjct: 232 RTLGPE 237
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
L YLH + +++RD K N++LD+ + K++DFGL + G DG + GT Y
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 175
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336
APE ++ D W GV +YE++ GR P + +KL E + L + +F
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN---QDHEKLFELI---LMEEIRFP 229
Query: 337 MILDPK 342
L P+
Sbjct: 230 RTLGPE 235
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK L ++ ++E NVL V HP+++KL G C++D LLI EY
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG----PLLLIVEYAKYG 111
Query: 189 SVQ-------------------------DHLTSRFQATLPWNTRLKIAQDAARGLAYLHE 223
S++ DH R L + A ++G+ YL E
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER---ALTMGDLISFAWQISQGMQYLAE 168
Query: 224 GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYI 282
++ RD + NIL+ E K+SDFGL+R + D S + + + A E +
Sbjct: 169 ---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESL 224
Query: 283 QTGRLTYKSDIWSFGVFLYELIT 305
T +SD+WSFGV L+E++T
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 103
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L + + A ARG+ YL + I RD
Sbjct: 104 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 160
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 161 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 216 HQSDVWSFGVLLWEIFT 232
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 128 IDIAVKQLSRRGLQGHKE-WVTEVNVLG-VVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L KE ++E+ ++ + +H N+V L+G C G L+I EY
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT----HGGPVLVITEYC 132
Query: 186 PNRSVQDHLTSRFQATL------PWNTR--LKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237
+ + L + +A L P R L + A+G+A+L I RD +
Sbjct: 133 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 189
Query: 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
N+LL AK+ DFGLAR +D V + + APE I T +SD+WS+G
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 298 VFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
+ L+E+ + G P P + KF ++ + + +
Sbjct: 250 ILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPAFAPKNIY 293
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNK 382
++ C A + RP ++ L +
Sbjct: 294 SIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 69 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 124
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 125 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 181
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR G + + + PE G T
Sbjct: 182 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT 241
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 242 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 286
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 287 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 332
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 40/283 (14%)
Query: 36 SSASNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELK 93
S N + + ++S EF ++ DF E+ S+NT A L Q F +K
Sbjct: 19 SHMGNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIK 68
Query: 94 T-ATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNV 152
T T +F R +++ +H + I KQ + L+ + + E +
Sbjct: 69 TLGTGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRI 115
Query: 153 LGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQ 212
L V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 116 LQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ 170
Query: 213 DAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG 272
YLH +I+RD K N+L+D+Q +++DFG A+ + + + G
Sbjct: 171 -IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGATWTLCG 221
Query: 273 TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
T Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 159
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L ++ + A ARG+ YL + I RD
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 216
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 217 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 272 HQSDVWSFGVLLWEIFT 288
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 107
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 167
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 277
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 278 -----------CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 90 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 144
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 145 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 195
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 196 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 116
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 286
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 287 -----------CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 49/281 (17%)
Query: 38 ASNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT- 94
ASN+S DV+ EF ++ DF ES ++NT A L Q F +KT
Sbjct: 2 ASNSS-----DVK----EFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIKTL 42
Query: 95 ATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLG 154
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 43 GTGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQ 89
Query: 155 VVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDA 214
V P LVKL + +D+ ++ EY+P + HL + + P + R AQ
Sbjct: 90 AVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQ-I 143
Query: 215 ARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTI 274
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 144 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTP 195
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 33/197 (16%)
Query: 130 IAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L + + ++E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYASK 118
Query: 188 RSVQDHLTSRFQATLPWNTR--------------LKIAQDAARGLAYLHEGMDFQIIFRD 233
+++++L +R L + + A ARG+ YL + I RD
Sbjct: 119 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG-----YAAPEYIQTGRLT 288
+ N+L+ E K++DFGLAR + H+ T G + APE + T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 289 YKSDIWSFGVFLYELIT 305
++SD+WSFGV L+E+ T
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVITEFCKF 107
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 167
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 277
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 278 -----------CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 128 IDIAVKQLSRRGLQGHKE-WVTEVNVLG-VVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L KE ++E+ ++ + +H N+V L+G C G L+I EY
Sbjct: 69 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT----HGGPVLVITEYC 124
Query: 186 PNRSVQDHLTSRFQATL------PWNTR--LKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237
+ + L + +A L P R L + A+G+A+L I RD +
Sbjct: 125 CYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 181
Query: 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
N+LL AK+ DFGLAR +D V + + APE I T +SD+WS+G
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 298 VFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLA 356
+ L+E+ + G P P + KF ++ + + +
Sbjct: 242 ILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPAFAPKNIY 285
Query: 357 AVANKCLARQAKGRPKMSEVVEVLNK 382
++ C A + RP ++ L +
Sbjct: 286 SIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
LI +Y+ + HL+ R + T ++ + + L +LH+ II+RD K NI
Sbjct: 136 LILDYINGGELFTHLSQRERFT-EHEVQIYVGE-IVLALEHLHK---LGIIYRDIKLENI 190
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
LLD + L+DFGL++ +D + + GTI Y AP+ ++ G + D WS G
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 298 VFLYELITGRRPLDRNRPKSEQ 319
V +YEL+TG P + K+ Q
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQ 271
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 123 DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182
+ H +AVK++ R Q + EV ++ H N+V + DE + +
Sbjct: 66 EKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWV----VM 121
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA------RGLAYLHEGMDFQIIFRDFKS 236
E++ ++ D +T +TR+ Q A R L+YLH + +I RD KS
Sbjct: 122 EFLEGGALTDIVT---------HTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKS 169
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTYK 290
+ILL KLSDFG + VS V VGT + APE I RL Y
Sbjct: 170 DSILLTSDGRIKLSDFGFC--------AQVSKEVPKRKXLVGTPYWMAPEVIS--RLPYG 219
Query: 291 S--DIWSFGVFLYELITGRRPLDRNRP-KSEQKLLEWVRPHLTDAKKFTMIL 339
+ DIWS G+ + E+I G P P ++ +++ + + P + D K + +L
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVL 271
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 122/283 (43%), Gaps = 53/283 (18%)
Query: 38 ASNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT- 94
ASN+S DV+ EF ++ DF ES ++NT A L Q F +KT
Sbjct: 2 ASNSS-----DVK----EFLAKAKEDFLKKWESPAQNT-AHLDQ---------FERIKTL 42
Query: 95 ATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLG 154
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 43 GTGSFGRVMLVK------------HKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQ 89
Query: 155 VVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPWNTRLKIAQ 212
V P LVKL + +D+ ++ EY+P + HL RF + R AQ
Sbjct: 90 AVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEP---HARFYAAQ 142
Query: 213 DAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG 272
YLH +I+RD K N+L+D+Q +++DFG A+ + + + G
Sbjct: 143 -IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 193
Query: 273 TIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
T Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 90 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 144
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 145 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 195
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+++D+Q +++DFGLA+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+P + HL + + P +
Sbjct: 75 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEP-HA 129
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 130 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGR 180
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 181 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+++D+Q K++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 39/266 (14%)
Query: 129 DIAVKQLSRRGLQGHK--EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
DI VK L R K ++ E L + HPN++ ++G C LI +MP
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITHWMP 92
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
S+ + L + + +K A D ARG+A+LH ++ I S ++++DE
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMT 151
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLY 301
A++S + S S + + APE +Q T R + +D+WSF V L+
Sbjct: 152 ARISMADVK-------FSFQSPGRMYAPAWVAPEALQKKPEDTNRRS--ADMWSFAVLLW 202
Query: 302 ELITGRRPLD--RNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVA 359
EL+T P N + LE +RP + ++ ++ +
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPG------------------ISPHVSKLM 244
Query: 360 NKCLARQAKGRPKMSEVVEVLNKIVD 385
C+ RPK +V +L K+ D
Sbjct: 245 KICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 116
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 286
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 287 -----------CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E +L V P LVKL + +D+ ++ EY+P + HL RF
Sbjct: 90 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEP--- 142
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 143 HARFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VK 193
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E +L V P LVKL + +D+ ++ EY+P + HL RF
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEP--- 141
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 142 HARFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VK 192
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E +L V P LVKL + +D+ ++ EY+P + HL RF
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFXEP--- 141
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 142 HARFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VK 192
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E +L V P LVKL + +D+ ++ EY P + HL RF
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFXEP--- 141
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ R AQ YLH +I+RD K N+++D+Q K++DFG A+ +
Sbjct: 142 HARFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VK 192
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 153
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 154 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 213
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 274 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 323
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 324 -----------CWHGEPSQRPTFSELVEHLGNLLQA 348
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 126 KKIDIAVKQLSRRGLQGHKEWVT-EVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183
K +++ ++LS L+ +E E ++L V HP+++ LI + E L+++
Sbjct: 125 KIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI----DSYESSSFMFLVFD 180
Query: 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
M + D+LT + L I + +++LH I+ RD K NILLD+
Sbjct: 181 LMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDD 235
Query: 244 QWNAKLSDFGLA-RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR------LTYKSDIWSF 296
+LSDFG + L P + L + GT GY APE ++ + D+W+
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRE----LCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291
Query: 297 GVFLYELITGRRPL 310
GV L+ L+ G P
Sbjct: 292 GVILFTLLAGSPPF 305
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ + V+ HP LV L +D+E ++IYE+M + + + + + +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVADE-HNKMSEDEAV 152
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA--KLSDFGL-ARLGPSDGLSH 265
+ + +GL ++HE + D K NI+ + + KL DFGL A L P +
Sbjct: 153 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK- 208
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
GT +AAPE + + Y +D+WS GV Y L++G P
Sbjct: 209 ---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 47/277 (16%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 118
Query: 188 RSVQDHLTSRFQATLPWNTR------------LKIAQDAARGLAYLHEGMDFQIIFRDFK 235
++ +L S+ +P+ + + A+G+ +L + I RD
Sbjct: 119 GNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLA 175
Query: 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWS 295
+ NILL E+ K+ DFGLAR D + + APE I T +SD+WS
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 296 FGVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSI 349
FGV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD--------- 286
Query: 350 KLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 287 ------------CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 49/279 (17%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 118
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH----------EGMDF----QIIFRD 233
++ +L S+ +P+ + +D + L +GM+F + I RD
Sbjct: 119 GNLSTYLRSKRNEFVPYK---EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 175
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
+ NILL E+ K+ DFGLAR D + + APE I T +SD+
Sbjct: 176 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 235
Query: 294 WSFGVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKY 347
WSFGV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 236 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD------- 288
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 289 --------------CWHGEPSQRPTFSELVEHLGNLLQA 313
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIVEFCKF 116
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 286
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 287 -----------CWHGEPSQRPTFSELVEHLGNLLQA 311
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK S R Q W E + V H N++ I Q LI Y +
Sbjct: 34 VAVKIFSSRDEQS---WFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEH 90
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILLD 242
S+ D L + TL + L++A AA GLA+LH E Q I RDFKS N+L+
Sbjct: 91 GSLYDFLQRQ---TLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVK 147
Query: 243 EQWNAKLSDFGLARLGP--SDGLSHVSTAVVGTIGYAAPEYIQTGRLT-----YK-SDIW 294
++D GLA + SD L + VGT Y APE + T YK +DIW
Sbjct: 148 SNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIW 207
Query: 295 SFGVFLYEL 303
+FG+ L+E+
Sbjct: 208 AFGLVLWEI 216
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVITEFCKF 107
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 167
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 277
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 278 -----------CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+++ + H ++V G+ ++D ++ E RS+ + L R +A R
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARY 143
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ Q G YLH ++I RD K N+ L+E K+ DFGLA DG
Sbjct: 144 YLRQ-IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKK 197
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ D+WS G +Y L+ G+ P +
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 43/276 (15%)
Query: 130 IAVKQLSRRGLQG-HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187
+AVK L H+ ++E+ +L + H N+V L+G C + G ++I E+
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVITEFCKF 107
Query: 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-------HEGMDF----QIIFRDFKS 236
++ +L S+ +P+ + L +L +GM+F + I RD +
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 167
Query: 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
NILL E+ K+ DFGLAR D + + APE I T +SD+WSF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 297 GVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDAKKFTMILDPKLEGKYSIK 350
GV L+E+ + G P + E ++L E R P T + + +LD
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD---------- 277
Query: 351 LAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
C + RP SE+VE L ++ A
Sbjct: 278 -----------CWHGEPSQRPTFSELVEHLGNLLQA 302
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+++ + H ++V G+ ++D ++ E RS+ + L R +A R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARY 121
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ Q G YLH ++I RD K N+ L+E K+ DFGLA DG
Sbjct: 122 YLRQ-IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKK 175
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ D+WS G +Y L+ G+ P +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+++ + H ++V G+ ++D ++ E RS+ + L R +A R
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARY 119
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ Q G YLH ++I RD K N+ L+E K+ DFGLA DG
Sbjct: 120 YLRQ-IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKK 173
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ D+WS G +Y L+ G+ P +
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN----RS 189
QL + G++ + E+ + + HPN++++ Y D + I L+ E+ P +
Sbjct: 52 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYF--HDRKRI--YLMLEFAPRGELYKE 105
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+Q H RF ++ A L Y HE ++I RD K N+L+ + K+
Sbjct: 106 LQKH--GRFDE----QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKI 156
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+W GV YE + G P
Sbjct: 157 ADFGWSVHAPSLR----RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
Query: 310 LD 311
D
Sbjct: 213 FD 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN----RS 189
QL + G++ + E+ + + HPN++++ Y D + I L+ E+ P +
Sbjct: 51 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYF--HDRKRI--YLMLEFAPRGELYKE 104
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+Q H RF ++ A L Y HE ++I RD K N+L+ + K+
Sbjct: 105 LQKH--GRFDE----QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKI 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+W GV YE + G P
Sbjct: 156 ADFGWSVHAPSLR----RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
Query: 310 LD 311
D
Sbjct: 212 FD 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+++ + H ++V G+ ++D ++ E RS+ + L R +A R
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARY 121
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ Q G YLH ++I RD K N+ L+E K+ DFGLA DG
Sbjct: 122 YLRQ-IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKK 175
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ D+WS G +Y L+ G+ P +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+++ + H ++V G+ ++D ++ E RS+ + L R +A R
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARY 125
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ Q G YLH ++I RD K N+ L+E K+ DFGLA DG
Sbjct: 126 YLRQ-IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKK 179
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ D+WS G +Y L+ G+ P +
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 194 LTSRFQATLP------WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
L S+F+ LP + + IA D+ L Y+H RD K NIL+D +
Sbjct: 164 LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHI 214
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYE 302
+L+DFG DG S A VGT Y +PE +Q GR + D WS GV +YE
Sbjct: 215 RLADFGSCLKLMEDGTVQSSVA-VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 303 LITGRRPL 310
++ G P
Sbjct: 274 MLYGETPF 281
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 134 QLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN----RS 189
QL + G++ + E+ + + HPN++++ Y D + I L+ E+ P +
Sbjct: 51 QLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYF--HDRKRI--YLMLEFAPRGELYKE 104
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249
+Q H RF ++ A L Y HE ++I RD K N+L+ + K+
Sbjct: 105 LQKH--GRFDE----QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKI 155
Query: 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
+DFG + PS + GT+ Y PE I+ K D+W GV YE + G P
Sbjct: 156 ADFGWSVHAPSLR----RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
Query: 310 LD 311
D
Sbjct: 212 FD 213
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+++ + H ++V G+ ++D ++ E RS+ + L R +A R
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARY 145
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+ Q G YLH ++I RD K N+ L+E K+ DFGLA DG
Sbjct: 146 YLRQ-IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKK 199
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT Y APE + +++ D+WS G +Y L+ G+ P +
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 44/285 (15%)
Query: 36 SSASNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELK 93
S N + + ++S EF ++ DF E+ S+NT A L Q F +K
Sbjct: 19 SHMGNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIK 68
Query: 94 T-ATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNV 152
T T +F R +++ +H + I KQ + L+ + + E +
Sbjct: 69 TLGTGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRI 115
Query: 153 LGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPWNTRLKI 210
L V P LVKL + +D+ ++ EY+ + HL RF + R
Sbjct: 116 LQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYA 168
Query: 211 AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAV 270
AQ YLH +I+RD K N+L+D+Q +++DFG A+ + + +
Sbjct: 169 AQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXL 219
Query: 271 VGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ + V+ HP LV L +D+E ++IYE+M + + + + + +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVADEHNK-MSEDEAV 258
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA--KLSDFGL-ARLGPSDGLSH 265
+ + +GL ++HE + D K NI+ + + KL DFGL A L P +
Sbjct: 259 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK- 314
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
GT +AAPE + + Y +D+WS GV Y L++G P
Sbjct: 315 ---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 115/273 (42%), Gaps = 37/273 (13%)
Query: 149 EVNVLG-VVEHPNLVKLIGYCAEDDERGI--QRLLIYEYMPNRSVQDHLTSRFQATLPWN 205
E+N+L H N+ G + + G+ Q L+ E+ SV D + + TL
Sbjct: 70 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 129
Query: 206 TRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL-ARLGPSDGLS 264
I ++ RGL++LH+ ++I RD K N+LL E KL DFG+ A+L + G
Sbjct: 130 WIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 265 HVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319
+ +GT + APE I +KSD+WS G+ E+ G PL P
Sbjct: 187 NT---FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Query: 320 KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379
L+ P P+L+ K K ++K + CL + RP ++++
Sbjct: 244 FLIP-RNP------------APRLKSK---KWSKKFQSFIESCLVKNHSQRPATEQLMK- 286
Query: 380 LNKIVDAAETGTPQTPLKNLSLKDDFETSKKER 412
P + LKD + +KK+R
Sbjct: 287 -----HPFIRDQPNERQVRIQLKDHIDRTKKKR 314
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 17/231 (7%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLI-GYCAEDDERG 175
++ + H +AVK + R Q + EV ++ +H N+V++ Y G
Sbjct: 60 IVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-----G 114
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQIIFRDF 234
+ ++ E++ ++ D ++ Q L + + + LAYLH +G +I RD
Sbjct: 115 EELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG----VIHRDI 167
Query: 235 KSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294
KS +ILL KLSDFG D +VGT + APE I + DIW
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 295 SFGVFLYELITGRRPLDRNRP-KSEQKLLEWVRPHLTDAKKFTMILDPKLE 344
S G+ + E++ G P + P ++ ++L + P L ++ K + +L LE
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK++ R Q + EV ++ +H N+V++ DE + + E++ +
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGA 112
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ---IIFRDFKSSNILLDEQWN 246
+ D +T +TR+ Q AA LA L +I RD KS +ILL
Sbjct: 113 LTDIVT---------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 163
Query: 247 AKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTY--KSDIWSFGV 298
KLSDFG + VS V VGT + APE I RL Y + DIWS G+
Sbjct: 164 VKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELI--SRLPYGPEVDIWSLGI 213
Query: 299 FLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEG 345
+ E++ G P P K++ + + P L + K + P L+G
Sbjct: 214 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS----PSLKG 257
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 37/227 (16%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK++ R Q + EV ++ +H N+V++ DE + + E++ +
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGA 234
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ---IIFRDFKSSNILLDEQWN 246
+ D +T +TR+ Q AA LA L +I RD KS +ILL
Sbjct: 235 LTDIVT---------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 285
Query: 247 AKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTY--KSDIWSFGV 298
KLSDFG + VS V VGT + APE I RL Y + DIWS G+
Sbjct: 286 VKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELI--SRLPYGPEVDIWSLGI 335
Query: 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEG 345
+ E++ G P P K ++ +R +L K + P L+G
Sbjct: 336 MVIEMVDGEPPYFNEPP---LKAMKMIRDNLPPRLKNLHKVSPSLKG 379
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ + H N+V+ IG + +
Sbjct: 52 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQS----L 107
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 164
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 165 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 224
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 225 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 269
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
+ + +C Q + RP + ++E
Sbjct: 270 --NCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK++ R Q + EV ++ +H N+V++ DE + + E++ +
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGA 114
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ---IIFRDFKSSNILLDEQWN 246
+ D +T +TR+ Q AA LA L +I RD KS +ILL
Sbjct: 115 LTDIVT---------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 165
Query: 247 AKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTY--KSDIWSFGV 298
KLSDFG + VS V VGT + APE I RL Y + DIWS G+
Sbjct: 166 VKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELI--SRLPYGPEVDIWSLGI 215
Query: 299 FLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEG 345
+ E++ G P P K++ + + P L + K + P L+G
Sbjct: 216 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS----PSLKG 259
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK++ R Q + EV ++ +H N+V++ DE + + E++ +
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGA 103
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ---IIFRDFKSSNILLDEQWN 246
+ D +T +TR+ Q AA LA L +I RD KS +ILL
Sbjct: 104 LTDIVT---------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 154
Query: 247 AKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTY--KSDIWSFGV 298
KLSDFG + VS V VGT + APE I RL Y + DIWS G+
Sbjct: 155 VKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELI--SRLPYGPEVDIWSLGI 204
Query: 299 FLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEG 345
+ E++ G P P K++ + + P L + K + P L+G
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS----PSLKG 248
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY P + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+++D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQA---TLPW 204
E+ VL ++HPN++K+ E E ++ E + + + S QA L
Sbjct: 69 AEIEVLKSLDHPNIIKIF----EVFEDYHNMYIVMETCEGGELLERIVSA-QARGKALSE 123
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE---QWNAKLSDFGLARLGPSD 261
++ + LAY H ++ +D K NIL + K+ DFGLA L SD
Sbjct: 124 GYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
H ST GT Y APE + +T+K DIWS GV +Y L+TG P
Sbjct: 181 --EH-STNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK++ R Q + EV ++ +H N+V++ DE + + E++ +
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGA 107
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ---IIFRDFKSSNILLDEQWN 246
+ D +T +TR+ Q AA LA L +I RD KS +ILL
Sbjct: 108 LTDIVT---------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 158
Query: 247 AKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTY--KSDIWSFGV 298
KLSDFG + VS V VGT + APE I RL Y + DIWS G+
Sbjct: 159 VKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELIS--RLPYGPEVDIWSLGI 208
Query: 299 FLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEG 345
+ E++ G P P K++ + + P L + K + P L+G
Sbjct: 209 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS----PSLKG 252
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 52 SGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-ATKNFSRSLMIXXX 108
S EF ++ DF E+ S+NT A L Q F +KT T +F R +++
Sbjct: 1 SVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLGTGSFGRVMLVK-- 48
Query: 109 XXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYC 168
+H + I KQ + L+ + + E +L V P LVKL +
Sbjct: 49 ----------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVNFPFLVKL-EFS 96
Query: 169 AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ 228
+D+ ++ EY+ + HL + + P + R AQ YLH
Sbjct: 97 FKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLH---SLD 148
Query: 229 IIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
+I+RD K N+L+DEQ +++DFG A+ + + + GT Y APE I +
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 289 YKSDIWSFGVFLYELITGRRPLDRNRP 315
D W+ GV +YE+ G P ++P
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 114 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 169
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 226
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 284
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 285 QSDVWSFGVLMWEIFT 300
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 20/166 (12%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLPW 204
+ E+++L + HPN+V LI ER + L++E+M + V D + Q
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHS--ERCLT--LVFEFMEKDLKKVLDENKTGLQ----- 117
Query: 205 NTRLKI-AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
++++KI RG+A+ H+ +I+ RD K N+L++ KL+DFGLAR + G+
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLAR---AFGI 171
Query: 264 SHVS-TAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELITGR 307
S T V T+ Y AP+ + + + + DIWS G E+ITG+
Sbjct: 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 20/166 (12%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLPW 204
+ E+++L + HPN+V LI ER + L++E+M + V D + Q
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHS--ERCLT--LVFEFMEKDLKKVLDENKTGLQ----- 117
Query: 205 NTRLKI-AQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263
++++KI RG+A+ H+ +I+ RD K N+L++ KL+DFGLAR + G+
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLAR---AFGI 171
Query: 264 SHVS-TAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELITGR 307
S T V T+ Y AP+ + + + + DIWS G E+ITG+
Sbjct: 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ + H N+V+ IG + +
Sbjct: 66 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQS----L 121
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 122 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 178
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 179 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 238
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 283
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
+ + +C Q + RP + ++E
Sbjct: 284 --NCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 58 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 113
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 114 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 170
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 171 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 230
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 231 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 275
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 276 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 321
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P L KL + +D+ ++ EY P + HL + + P +
Sbjct: 90 LNEKRILQAVNFPFLTKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HA 144
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+++D+Q K++DFG A+ +
Sbjct: 145 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGR 195
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P L KL + +D+ ++ EY P + HL + + P +
Sbjct: 90 LNEKRILQAVNFPFLTKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFSEP-HA 144
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+++D+Q K++DFG A+ +
Sbjct: 145 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VKGR 195
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 52 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 107
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 164
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 165 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 224
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 225 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 269
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 270 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 315
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 128 IDIAVKQLSRR-GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+ +AVK L Q +++ E ++ H N+V+ IG + + R ++ E M
Sbjct: 88 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----LPRFILLELMA 143
Query: 187 NRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL 241
++ L +R + + P + L +A+D A G YL E I RD + N LL
Sbjct: 144 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 200
Query: 242 DEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
AK+ DFG+AR + + + PE G T K+D WSFGV
Sbjct: 201 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGV 260
Query: 299 FLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357
L+E+ + G P KS Q++LE+V T + +DP +
Sbjct: 261 LLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK------NCPGPVYR 303
Query: 358 VANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ +C Q + RP + E +E + D T P
Sbjct: 304 IMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 341
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 66 VSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 121
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 122 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 178
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 179 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 238
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 283
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 284 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 329
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ + + HPN+++L Y D R I LI EY P + L T
Sbjct: 73 EIEIQAHLHHPNILRLYNYFY--DRRRI--YLILEYAPRGELYKELQK--SCTFDEQRTA 126
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
I ++ A L Y H ++I RD K N+LL + K++DFG + PS
Sbjct: 127 TIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR----RK 179
Query: 269 AVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311
+ GT+ Y PE I+ K D+W GV YEL+ G P +
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 68 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 123
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 124 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 180
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 181 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 240
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 241 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 285
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 286 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 331
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E + V P LVKL + +D+ ++ EY P + HL + + P +
Sbjct: 90 LNEKRIQQAVNFPFLVKL-EFSFKDNS---NLYMVLEYAPGGEMFSHLRRIGRFSEP-HA 144
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q K++DFG A+ +
Sbjct: 145 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGR 195
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 2 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 51
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 52 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 98
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 99 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 152
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 153 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 204
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 29/194 (14%)
Query: 129 DIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ AVK +S+R ++ + + EV +L ++HPN++KL + +++G L+ E
Sbjct: 53 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF---EDKGY-FYLVGEVY 108
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ- 244
+ D + SR + + R I + G+ Y+H+ +I+ RD K N+LL+ +
Sbjct: 109 TGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 163
Query: 245 --WNAKLSDFGLARLGPSDGLSHVSTAV-----VGTIGYAAPEYIQTGRLTYKSDIWSFG 297
N ++ DFGL+ +H + +GT Y APE + G K D+WS G
Sbjct: 164 KDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 214
Query: 298 VFLYELITGRRPLD 311
V LY L++G P +
Sbjct: 215 VILYILLSGCPPFN 228
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSV 190
A K + + + ++++ E+ +L +HP +VKL+G D + I + E+ P +V
Sbjct: 48 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI----MIEFCPGGAV 103
Query: 191 QDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250
D + L + + L +LH +II RD K+ N+L+ + + +L+
Sbjct: 104 -DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLA 159
Query: 251 DFGLARLGPSDGLSHVST--AVVGTIGYAAPEYIQTGRLT-----YKSDIWSFGVFLYEL 303
DFG++ + L + + +GT + APE + + YK+DIWS G+ L E+
Sbjct: 160 DFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Query: 304 ITGRRPLDRNRP 315
P P
Sbjct: 216 AQIEPPHHELNP 227
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 66 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 121
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 122 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 178
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 179 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 238
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 283
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 284 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 329
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 44/205 (21%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGV--VEHPNLVKLIGYCAEDDER-----GIQRLLIY 182
+AVK S + ++ E N+ V +EH N+ + I DER ++ LL+
Sbjct: 39 VAVKVFS---FANRQNFINEKNIYRVPLMEHDNIARFI----VGDERVTADGRMEYLLVM 91
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH----EGMDFQ--IIFRDFKS 236
EY PN S+ +L+ T W + ++A RGLAYLH G ++ I RD S
Sbjct: 92 EYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148
Query: 237 SNILLDEQWNAKLSDFGLA---------RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
N+L+ +SDFGL+ R G D + + + VGTI Y APE ++ G +
Sbjct: 149 RNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED---NAAISEVGTIRYMAPEVLE-GAV 204
Query: 288 TYKS--------DIWSFGVFLYELI 304
+ D+++ G+ +E+
Sbjct: 205 NLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 125 HKKID--IAVKQLSRRGLQGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDERGIQRLLI 181
HKK + AVK +S+R ++ + + E+ L + E HPN+VKL E + L+
Sbjct: 32 HKKSNQAFAVKIISKR-MEANTQ--KEITALKLCEGHPNIVKL----HEVFHDQLHTFLV 84
Query: 182 YEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
E + + + + + F T I + ++++H D ++ RD K N+
Sbjct: 85 MELLNGGELFERIKKKKHFSET----EASYIMRKLVSAVSHMH---DVGVVHRDLKPENL 137
Query: 240 LL-DEQWN--AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSF 296
L DE N K+ DFG ARL P D + T+ YAAPE + D+WS
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGYDESCDLWSL 195
Query: 297 GVFLYELITGRRPL 310
GV LY +++G+ P
Sbjct: 196 GVILYTMLSGQVPF 209
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPW 204
+ E +L V P L KL + +D+ ++ EY P + HL RF
Sbjct: 90 LNEKRILQAVNFPFLTKL-EFSFKDNS---NLYMVMEYAPGGEMFSHLRRIGRFXEP--- 142
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS 264
+ R AQ YLH +I+RD K N+++D+Q K++DFG A+ +
Sbjct: 143 HARFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR-----VK 193
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 51 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 106
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 107 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 163
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 268
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
+ + +C Q + RP + ++E
Sbjct: 269 --NCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
+AVK++ R Q + EV ++ +H N+V++ DE + + E++ +
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGA 157
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ---IIFRDFKSSNILLDEQWN 246
+ D +T +TR+ Q AA LA L +I RD KS +ILL
Sbjct: 158 LTDIVT---------HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR 208
Query: 247 AKLSDFGLARLGPSDGLSHVSTAV------VGTIGYAAPEYIQTGRLTY--KSDIWSFGV 298
KLSDFG + VS V VGT + APE I RL Y + DIWS G+
Sbjct: 209 VKLSDFGFC--------AQVSKEVPRRKXLVGTPYWMAPELIS--RLPYGPEVDIWSLGI 258
Query: 299 FLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEG 345
+ E++ G P P K++ + + P L + K + P L+G
Sbjct: 259 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVS----PSLKG 302
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 44/282 (15%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAACKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPWNTRLKIAQD 213
V P LVKL + +D+ ++ EY+ + HL RF + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYAAQ- 149
Query: 214 AARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT 273
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 201
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS 291
RD + N+L+ E K++DFGLAR + +T + + APE + T++S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 292 DIWSFGVFLYELIT 305
D+WSFGV ++E+ T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLAGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 55 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 110
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 111 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 167
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 225
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 226 QSDVWSFGVLMWEIFT 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 29/194 (14%)
Query: 129 DIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ AVK +S+R ++ + + EV +L ++HPN++KL + +++G L+ E
Sbjct: 76 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF---EDKGY-FYLVGEVY 131
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ- 244
+ D + SR + + R I + G+ Y+H+ +I+ RD K N+LL+ +
Sbjct: 132 TGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 186
Query: 245 --WNAKLSDFGLARLGPSDGLSHVSTAV-----VGTIGYAAPEYIQTGRLTYKSDIWSFG 297
N ++ DFGL+ +H + +GT Y APE + G K D+WS G
Sbjct: 187 KDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 237
Query: 298 VFLYELITGRRPLD 311
V LY L++G P +
Sbjct: 238 VILYILLSGCPPFN 251
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSV 190
A K + + + ++++ E+ +L +HP +VKL+G D + I + E+ P +V
Sbjct: 40 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI----MIEFCPGGAV 95
Query: 191 QDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250
D + L + + L +LH +II RD K+ N+L+ + + +L+
Sbjct: 96 -DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLA 151
Query: 251 DFGLARLGPSDGLSHVS--TAVVGTIGYAAPEYIQTGRL-----TYKSDIWSFGVFLYEL 303
DFG++ + L + + +GT + APE + + YK+DIWS G+ L E+
Sbjct: 152 DFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Query: 304 ITGRRPLDRNRP 315
P P
Sbjct: 208 AQIEPPHHELNP 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 51 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 106
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 163
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 268
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
+ + +C Q + RP + ++E
Sbjct: 269 --NCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 40/269 (14%)
Query: 50 RKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-ATKNFSRSLMIX 106
++S EF ++ DF E+ S+NT A L Q F +KT T +F R +++
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLGTGSFGRVMLVK 61
Query: 107 XXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIG 166
+H + I KQ + L+ + + E +L V P LVKL
Sbjct: 62 ------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVNFPFLVKL-E 107
Query: 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMD 226
+ +D+ ++ EY+ + HL + + P + R AQ YLH
Sbjct: 108 FSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLH---S 159
Query: 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR 286
+I+RD K N+L+D+Q +++DFG A+ + + + GT Y APE I +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 287 LTYKSDIWSFGVFLYELITGRRPLDRNRP 315
D W+ GV +YE+ G P ++P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 60 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 115
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 116 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 172
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 173 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 230
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 231 QSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 57 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 112
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 113 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 169
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 170 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 227
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 228 QSDVWSFGVLMWEIFT 243
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 43 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 98
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 99 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 155
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+AR + + + PE G T
Sbjct: 156 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 215
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 216 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 260
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378
+ + +C Q + RP + ++E
Sbjct: 261 --NCPGPVYRIMTQCWQHQPEDRPNFAIILE 289
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 29/194 (14%)
Query: 129 DIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ AVK +S+R ++ + + EV +L ++HPN++KL + +++G L+ E
Sbjct: 77 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF---EDKGY-FYLVGEVY 132
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ- 244
+ D + SR + + R I + G+ Y+H+ +I+ RD K N+LL+ +
Sbjct: 133 TGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 187
Query: 245 --WNAKLSDFGLARLGPSDGLSHVSTAV-----VGTIGYAAPEYIQTGRLTYKSDIWSFG 297
N ++ DFGL+ +H + +GT Y APE + G K D+WS G
Sbjct: 188 KDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 238
Query: 298 VFLYELITGRRPLD 311
V LY L++G P +
Sbjct: 239 VILYILLSGCPPFN 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSR--------------FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + + + + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS 291
RD + N+L+ E K++DFGLAR + +T + + APE + T++S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 292 DIWSFGVFLYELIT 305
D+WSFGV ++E+ T
Sbjct: 241 DVWSFGVLMWEIFT 254
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 44/282 (15%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPWNTRLKIAQD 213
V P LVKL + +D+ ++ EY+ + HL RF + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYAAQ- 149
Query: 214 AARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT 273
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 201
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLXGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 50 RKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-ATKNFSRSLMIX 106
++S EF ++ DF E+ S+NT A L Q F +KT T +F R +++
Sbjct: 12 QESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLGTGSFGRVMLVK 61
Query: 107 XXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIG 166
+H + I KQ + L+ + + E +L V P LVKL
Sbjct: 62 ------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVNFPFLVKL-E 107
Query: 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMD 226
+ +D+ ++ EY+ + HL + + P + R AQ YLH
Sbjct: 108 FSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IVLTFEYLH---S 159
Query: 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR 286
+I+RD K N+L+D+Q +++DFG A+ + + + GT Y APE I +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPEYLAPEIILSKG 214
Query: 287 LTYKSDIWSFGVFLYELITGRRPLDRNRP 315
D W+ GV +YE+ G P + P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 40 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQ 99
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 100 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 142
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 44/282 (15%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPWNTRLKIAQD 213
V P LVKL + +D+ ++ EY+ + HL RF + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYAAQ- 149
Query: 214 AARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT 273
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGT 201
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 128 IDIAVKQLSRRGLQGHKE-WVTEVNVLG-VVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L KE ++E+ ++ + +H N+V L+G C G L+I EY
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT----HGGPVLVITEYC 132
Query: 186 PNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLH------EGMDF----QIIFRD 233
+ + L SR T P IA A LH +GM F I RD
Sbjct: 133 CYGDLLNFLRRKSRVLETDP---AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
+ N+LL AK+ DFGLAR +D V + + APE I T +SD+
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 294 WSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLA 352
WS+G+ L+E+ + G P P + KF ++ +
Sbjct: 250 WSYGILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPAFAP 293
Query: 353 QKLAAVANKCLARQAKGRPKMSEVVEVLNK 382
+ + ++ C A + RP ++ L +
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFAEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 38/270 (14%)
Query: 128 IDIAVKQLSRRGLQGHKE-WVTEVNVLG-VVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L KE ++E+ ++ + +H N+V L+G C G L+I EY
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT----HGGPVLVITEYC 132
Query: 186 PNRSVQDHL--TSRFQATLP--------WNTR--LKIAQDAARGLAYLHEGMDFQIIFRD 233
+ + L SR T P +TR L + A+G+A+L I RD
Sbjct: 133 CYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRD 189
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
+ N+LL AK+ DFGLAR +D V + + APE I T +SD+
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 294 WSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLA 352
WS+G+ L+E+ + G P P + KF ++ +
Sbjct: 250 WSYGILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPAFAP 293
Query: 353 QKLAAVANKCLARQAKGRPKMSEVVEVLNK 382
+ + ++ C A + RP ++ L +
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 44/271 (16%)
Query: 50 RKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-ATKNFSRSLMIX 106
++S EF ++ DF E+ S+NT A L Q F +KT T +F R +++
Sbjct: 7 QESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLGTGSFGRVMLVK 56
Query: 107 XXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIG 166
+H + I KQ + L+ + + E +L V P LVKL
Sbjct: 57 ------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVNFPFLVKL-E 102
Query: 167 YCAEDDERGIQRLLIYEYMPNRSVQDHL--TSRFQATLPWNTRLKIAQDAARGLAYLHEG 224
+ +D+ ++ EY+ + HL RF + R AQ YLH
Sbjct: 103 FSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYAAQ-IVLTFEYLH-- 153
Query: 225 MDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT 284
+I+RD K N+L+D+Q +++DFG A+ + + + GT Y APE I +
Sbjct: 154 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILS 207
Query: 285 GRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
D W+ GV +YE+ G P ++P
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 29/194 (14%)
Query: 129 DIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ AVK +S+R ++ + + EV +L ++HPN++KL + +++G L+ E
Sbjct: 59 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF---EDKGY-FYLVGEVY 114
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ- 244
+ D + SR + + R I + G+ Y+H+ +I+ RD K N+LL+ +
Sbjct: 115 TGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 169
Query: 245 --WNAKLSDFGLARLGPSDGLSHVSTAV-----VGTIGYAAPEYIQTGRLTYKSDIWSFG 297
N ++ DFGL+ +H + +GT Y APE + G K D+WS G
Sbjct: 170 KDANIRIIDFGLS--------THFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTG 220
Query: 298 VFLYELITGRRPLD 311
V LY L++G P +
Sbjct: 221 VILYILLSGCPPFN 234
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260
T+P + KIA + L +LH + +I RD K SN+L++ K+ DFG++
Sbjct: 105 TIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162
Query: 261 DGLSHVSTAVVGTIGYAAPEYI-----QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
D + G Y APE I Q G + KSDIWS G+ + EL R P D
Sbjct: 163 DVAKDIDA---GCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD---- 214
Query: 316 KSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSE 375
W P K+ P+L K + + ++CL + +K RP E
Sbjct: 215 -------SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPE 263
Query: 376 VVE 378
+++
Sbjct: 264 LMQ 266
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++D + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKDFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 162 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+++D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E +L V P LVKL + +D+ ++ EY+ + HL + + P +
Sbjct: 89 LNEKRILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HA 143
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
R AQ YLH +I+RD K N+L+D+Q +++DFG A+ +
Sbjct: 144 RFYAAQ-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGR 194
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
+ + GT Y APE I + D W+ GV +YE+ G P ++P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSV 190
A K + + + ++++ E+++L +HPN+VKL+ ++ I + E+ +V
Sbjct: 39 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAV 94
Query: 191 QDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250
D + + L + + + L YLH D +II RD K+ NIL + KL+
Sbjct: 95 -DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 150
Query: 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYI--QTGR---LTYKSDIWSFGVFLYELIT 305
DFG++ + + +GT + APE + +T + YK+D+WS G+ L E+
Sbjct: 151 DFGVSAKNTRTXIQR-RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 209
Query: 306 GRRP 309
P
Sbjct: 210 IEPP 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y APE I + D W+ GV +Y++ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I EY
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVEYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E +++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 102 MKDVYIVQDLMETDLYKLLKCQHLSN----DHICYFLYQIL-------------RGLKYI 144
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 40 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 99
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 100 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 142
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 40 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQ 99
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 100 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 142
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260
T+P + KIA + L +LH + +I RD K SN+L++ K+ DFG++
Sbjct: 149 TIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206
Query: 261 DGLSHVSTAVVGTIGYAAPEYI-----QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
S T G Y APE I Q G + KSDIWS G+ + EL R P D
Sbjct: 207 ---SVAKTIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD---- 258
Query: 316 KSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSE 375
W P K+ P+L K + + ++CL + +K RP E
Sbjct: 259 -------SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPE 307
Query: 376 VVE 378
+++
Sbjct: 308 LMQ 310
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 43 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 102
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 103 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 145
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 44 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 103
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 104 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 146
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 147 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 35 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 94
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 95 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 137
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 138 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 144
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 140
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 36 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 95
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 96 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 138
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 36 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 95
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 96 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 138
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 118 IRSTEDSHKKIDIAVKQLSR-RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176
+ + + +AVK L Q +++ E ++ H N+V+ IG + +
Sbjct: 52 VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS----L 107
Query: 177 QRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR----LKIAQDAARGLAYLHEGMDFQIIF 231
R ++ E M ++ L +R + + P + L +A+D A G YL E I
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIH 164
Query: 232 RDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288
RD + N LL AK+ DFG+A+ + + + PE G T
Sbjct: 165 RDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 224
Query: 289 YKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347
K+D WSFGV L+E+ + G P KS Q++LE+V T + +DP
Sbjct: 225 SKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV----TSGGR----MDPPK---- 269
Query: 348 SIKLAQKLAAVANKCLARQAKGRPKMS---EVVEVLNKIVDAAETGTP 392
+ + +C Q + RP + E +E + D T P
Sbjct: 270 --NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALP 315
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA---RLGPSDGLSHVSTAVVGT 273
GL +LH+ II+RD K N+LLD+ N ++SD GLA + G + + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323
G+ APE + + D ++ GV LYE+I R P K E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++ +++HP++V+L+ + D +++E+M + + R A ++ +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 209 --KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSDG 262
+ L Y H D II RD K N+LL + N+ KL DFG+A +LG S G
Sbjct: 132 ASHYMRQILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES-G 187
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
L V+ VGT + APE ++ D+W GV L+ L++G P
Sbjct: 188 L--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA---RLGPSDGLSHVSTAVVGT 273
GL +LH+ II+RD K N+LLD+ N ++SD GLA + G + + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323
G+ APE + + D ++ GV LYE+I R P K E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA---RLGPSDGLSHVSTAVVGT 273
GL +LH+ II+RD K N+LLD+ N ++SD GLA + G + + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323
G+ APE + + D ++ GV LYE+I R P K E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 194 LTSRFQATLP------WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
L S+F+ LP + + +A D+ L Y+H RD K N+LLD +
Sbjct: 164 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHI 214
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYE 302
+L+DFG DG S A VGT Y +PE +Q G+ + D WS GV +YE
Sbjct: 215 RLADFGSCLKMNDDGTVQSSVA-VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 273
Query: 303 LITGRRPL 310
++ G P
Sbjct: 274 MLYGETPF 281
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA---RLGPSDGLSHVSTAVVGT 273
GL +LH+ II+RD K N+LLD+ N ++SD GLA + G + + GT
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGT 352
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323
G+ APE + + D ++ GV LYE+I R P K E K L+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 194 LTSRFQATLP------WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
L S+F+ LP + + +A D+ L Y+H RD K N+LLD +
Sbjct: 180 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHI 230
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYE 302
+L+DFG DG S A VGT Y +PE +Q G+ + D WS GV +YE
Sbjct: 231 RLADFGSCLKMNDDGTVQSSVA-VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 289
Query: 303 LITGRRPL 310
++ G P
Sbjct: 290 MLYGETPF 297
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 144
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 46 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 105
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 106 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 148
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 149 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 140
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ EV++L ++H N+V L + E+ + L++EY+ ++ ++ +L N
Sbjct: 48 IREVSLLKDLKHANIVTL--HDIIHTEKSLT--LVFEYL-DKDLKQYLDDCGNIINMHNV 102
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+L + Q RGLAY H +++ RD K N+L++E+ KL+DFGLAR ++
Sbjct: 103 KLFLFQ-LLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPL 310
+ V T+ Y P+ I G Y + D+W G YE+ TG RPL
Sbjct: 159 NEVV--TLWYRPPD-ILLGSTDYSTQIDMWGVGCIFYEMATG-RPL 200
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 124 SHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLI 181
S + +AVK L L + ++E+ VL + H N+V L+G C G L+I
Sbjct: 66 SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVI 121
Query: 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKI----------------AQDAARGLAYLHEGM 225
EY + + L + + + T I + A+G+A+L
Sbjct: 122 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK- 180
Query: 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG 285
I RD + NILL K+ DFGLAR +D V + + APE I
Sbjct: 181 --NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC 238
Query: 286 RLTYKSDIWSFGVFLYELIT-GRRP 309
T++SD+WS+G+FL+EL + G P
Sbjct: 239 VYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 129 DIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ AVK +S+R ++ + + EV +L ++HPN+ KL + +++G L+ E
Sbjct: 53 ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFF---EDKGY-FYLVGEVY 108
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ- 244
+ D + SR + + R I + G+ Y H+ +I+ RD K N+LL+ +
Sbjct: 109 TGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKS 163
Query: 245 --WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
N ++ DFGL+ + S +GT Y APE + G K D+WS GV LY
Sbjct: 164 KDANIRIIDFGLSTHFEA---SKKXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYI 219
Query: 303 LITGRRPLD 311
L++G P +
Sbjct: 220 LLSGCPPFN 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 140
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ VV H N++ L+ + +
Sbjct: 39 IVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L+ Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS GV + E+I G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 144
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ + ++D + + +P
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPL 106
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 107 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 163
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 164 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 58 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 117
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 118 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 160
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 161 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 140
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ VV H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L+ Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS GV + E+I G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ + ++D + + +P
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPL 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 108 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 165 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSV 190
A K + + + ++++ E+++L +HPN+VKL+ ++ I + E+ +V
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAV 121
Query: 191 QDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250
D + + L + + + L YLH D +II RD K+ NIL + KL+
Sbjct: 122 -DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYI--QTGR---LTYKSDIWSFGVFLYELIT 305
DFG++ + + +GT + APE + +T + YK+D+WS G+ L E+
Sbjct: 178 DFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 235
Query: 306 GRRPLDRNRP 315
P P
Sbjct: 236 IEPPHHELNP 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSV 190
A K + + + ++++ E+++L +HPN+VKL+ ++ I + E+ +V
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAV 121
Query: 191 QDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250
D + + L + + + L YLH D +II RD K+ NIL + KL+
Sbjct: 122 -DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYI--QTGR---LTYKSDIWSFGVFLYELIT 305
DFG++ + + +GT + APE + +T + YK+D+WS G+ L E+
Sbjct: 178 DFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 235
Query: 306 GRRPLDRNRP 315
P P
Sbjct: 236 IEPPHHELNP 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTI 274
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 275 GYAAPEYIQTGRLTYKS-DIWSFGVFLYELITGR 307
Y APE + + KS DIWS G L E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 124 SHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLI 181
S + +AVK L +E ++E+ VL + H N+V L+G C G L+I
Sbjct: 50 SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVI 105
Query: 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKI----------------AQDAARGLAYLHEGM 225
EY + + L + + + T I + A+G+A+L
Sbjct: 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK- 164
Query: 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG 285
I RD + NILL K+ DFGLAR +D V + + APE I
Sbjct: 165 --NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC 222
Query: 286 RLTYKSDIWSFGVFLYELIT-GRRP 309
T++SD+WS+G+FL+EL + G P
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF---------------QA 200
++HPN+V L+G +D +I+ Y + + + L R A
Sbjct: 86 LQHPNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LGP 259
P + +AQ AA G+ YL ++ +D + N+L+ ++ N K+SD GL R +
Sbjct: 142 LEPPDFVHLVAQIAA-GMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE 318
+D + +++ I + APE I G+ + SDIWS+GV L+E+ + G +P S
Sbjct: 198 ADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG---YSN 253
Query: 319 QKLLEWVR 326
Q ++E +R
Sbjct: 254 QDVVEMIR 261
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
Y AP I + D W+ GV +YE+ G P ++P
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 124 SHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLI 181
S + +AVK L +E ++E+ VL + H N+V L+G C G L+I
Sbjct: 73 SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVI 128
Query: 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKI----------------AQDAARGLAYLHEGM 225
EY + + L + + + T I + A+G+A+L
Sbjct: 129 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK- 187
Query: 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG 285
I RD + NILL K+ DFGLAR +D V + + APE I
Sbjct: 188 --NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNC 245
Query: 286 RLTYKSDIWSFGVFLYELIT-GRRP 309
T++SD+WS+G+FL+EL + G P
Sbjct: 246 VYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 124 SHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLI 181
S + +AVK L L + ++E+ VL + H N+V L+G C G L+I
Sbjct: 68 SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVI 123
Query: 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKI----------------AQDAARGLAYLHEGM 225
EY + + L + + + T I + A+G+A+L
Sbjct: 124 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK- 182
Query: 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG 285
I RD + NILL K+ DFGLAR +D V + + APE I
Sbjct: 183 --NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC 240
Query: 286 RLTYKSDIWSFGVFLYELIT-GRRP 309
T++SD+WS+G+FL+EL + G P
Sbjct: 241 VYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 158
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 159 TYTHEVVTLWYRAPE-ILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ +L ++HPNLV L+ E R + L++EY + + H R+Q +P +
Sbjct: 52 EIRMLKQLKHPNLVNLL----EVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK 105
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL--GPSDGLSHV 266
I + + + H+ I RD K NIL+ + KL DFG ARL GPSD
Sbjct: 106 SITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD----Y 158
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITG 306
V T Y +PE + G Y D+W+ G EL++G
Sbjct: 159 YDDEVATRWYRSPELL-VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 98 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 140
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 111
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 112 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 165
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 166 TYTHEVVTLWYRAPE-ILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 47/279 (16%)
Query: 128 IDIAVKQLSRRGLQGHKE-WVTEVNVLG-VVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L KE ++E+ ++ + +H N+V L+G C G L+I EY
Sbjct: 62 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT----HGGPVLVITEYC 117
Query: 186 PNRSVQDHLTSRFQATL-------------------PWNTR--LKIAQDAARGLAYLHEG 224
+ + L + +A L P R L + A+G+A+L
Sbjct: 118 CYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK 177
Query: 225 MDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT 284
I RD + N+LL AK+ DFGLAR +D V + + APE I
Sbjct: 178 ---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 285 GRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
T +SD+WS+G+ L+E+ + G P P + KF ++
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGY 278
Query: 344 EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382
+ + + ++ C A + RP ++ L +
Sbjct: 279 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 317
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 137 RRGLQGHKEWVTEVNVLGVVEH-PNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
RRG E + E+ VL + + P ++ L E E + +LI EY +
Sbjct: 66 RRGQDCRAEILHEIAVLELAKSCPRVINL----HEVYENTSEIILILEYAAGGEIFSLCL 121
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW---NAKLSDF 252
+ N +++ + G+ YLH+ I+ D K NILL + + K+ DF
Sbjct: 122 PELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178
Query: 253 GLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
G++R +G + L + +GT Y APE + +T +D+W+ G+ Y L+T P
Sbjct: 179 GMSRKIGHACELREI----MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I Y
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVAYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 29/188 (15%)
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF---------------QA 200
++HPN+V L+G +D +I+ Y + + + L R A
Sbjct: 69 LQHPNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LGP 259
P + +AQ AA G+ YL ++ +D + N+L+ ++ N K+SD GL R +
Sbjct: 125 LEPPDFVHLVAQIAA-GMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE 318
+D + +++ I + APE I G+ + SDIWS+GV L+E+ + G +P S
Sbjct: 181 ADYYKLLGNSLL-PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG---YSN 236
Query: 319 QKLLEWVR 326
Q ++E +R
Sbjct: 237 QDVVEMIR 244
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 124 SHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLI 181
S + +AVK L +E ++E+ VL + H N+V L+G C G L+I
Sbjct: 73 SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----IGGPTLVI 128
Query: 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKI----------------AQDAARGLAYLHEGM 225
EY + + L + + + T I + A+G+A+L
Sbjct: 129 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK- 187
Query: 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG 285
I RD + NILL K+ DFGLAR +D V + + APE I
Sbjct: 188 --NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC 245
Query: 286 RLTYKSDIWSFGVFLYELIT-GRRP 309
T++SD+WS+G+FL+EL + G P
Sbjct: 246 VYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSV 190
A K + + + ++++ E+++L +HPN+VKL+ ++ I + E+ +V
Sbjct: 66 AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI----LIEFCAGGAV 121
Query: 191 QDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250
D + + L + + + L YLH D +II RD K+ NIL + KL+
Sbjct: 122 -DAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYI--QTGR---LTYKSDIWSFGVFLYELIT 305
DFG++ + +GT + APE + +T + YK+D+WS G+ L E+
Sbjct: 178 DFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 235
Query: 306 GRRPLDRNRP 315
P P
Sbjct: 236 IEPPHHELNP 245
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 108
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 109 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 162
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 163 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTI 274
RGL Y+H ++ RD K SN+L++ + K+ DFGLAR+ P + T V T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 275 GYAAPEYIQTGRLTYKS-DIWSFGVFLYELITGR 307
Y APE + + KS DIWS G L E+++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTI 274
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P + T V T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 275 GYAAPEYIQTGRLTYKS-DIWSFGVFLYELITGR 307
Y APE + + KS DIWS G L E+++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 114
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 115 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 172 DIXETDXXRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 103
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 104 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 157
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 158 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 181 DIXETDXXRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 158
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 159 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 105
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 106 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 159
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 160 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 128 IDIAVKQLSRRGLQGH-KEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
+ +AVK L + + V+E+ ++ ++ +H N++ L+G C +D + I Y
Sbjct: 68 VTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV----IVGYA 123
Query: 186 PNRSVQDHLTSRFQATLPWNTRLK--------------IAQDAARGLAYLHEGMDFQIIF 231
+++++L +R + ++ + ARG+ YL + I
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVG--TIGYAAPEYIQTGRLTY 289
RD + N+L+ E K++DFGLAR + + + G + + APE + T+
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 290 KSDIWSFGVFLYELIT 305
+SD+WSFGV ++E+ T
Sbjct: 239 QSDVWSFGVLMWEIFT 254
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 103
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 104 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 157
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 158 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 115/288 (39%), Gaps = 50/288 (17%)
Query: 128 IDIAVKQLSRRGLQGHKE-WVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
I +AVK L + +E ++E+ ++ + H N+V L+G C LI+EY
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG----PIYLIFEYC 131
Query: 186 PNRSVQDHLTSRFQA---------------------TLPWNTRLKIAQDAARGLAYLHEG 224
+ ++L S+ + L + L A A+G+ +L
Sbjct: 132 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL--- 188
Query: 225 MDFQ-IIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ 283
+F+ + RD + N+L+ K+ DFGLAR SD V + + APE +
Sbjct: 189 -EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 247
Query: 284 TGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPK 342
G T KSD+WS+G+ L+E+ + G P P + F ++
Sbjct: 248 EGIYTIKSDVWSYGILLWEIFSLGVNPY----------------PGIPVDANFYKLIQNG 291
Query: 343 LEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN-KIVDAAET 389
+ +++ + C A ++ RP + L ++ DA E
Sbjct: 292 FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 111
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 112 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 165
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 166 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 158
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 159 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 103
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 104 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 157
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 158 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 105 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 158
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 159 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 102
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + RD + N
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRDLAARN 157
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 158 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 216
Query: 298 VFLYELIT 305
V L+E+ +
Sbjct: 217 VVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 105
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + RD + N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 298 VFLYELIT 305
V L+E+ +
Sbjct: 220 VVLWEITS 227
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 105
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + RD + N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 298 VFLYELIT 305
V L+E+ +
Sbjct: 220 VVLWEITS 227
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 102 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 144
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + V T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 37/208 (17%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIG--------- 166
++ S D+ K+ +A+K++S Q + + + E+ +L H N++ +
Sbjct: 43 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 102
Query: 167 ----YCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL 221
Y +D E + +LL +++ N DH+ L RGL Y+
Sbjct: 103 MKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQIL-------------RGLKYI 145
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG-PSDGLSHVSTAVVGTIGYAAPE 280
H ++ RD K SN+LL+ + K+ DFGLAR+ P + V T Y APE
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 281 YIQTGRLTYKS-DIWSFGVFLYELITGR 307
+ + KS DIWS G L E+++ R
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 162 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 15/166 (9%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
E++++ + HP L+ L + A +D+ + +LI E++ + D + + +
Sbjct: 97 NEISIMNQLHHPKLINL--HDAFEDK--YEMVLILEFLSGGELFDRIAAE-DYKMSEAEV 151
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ--WNAKLSDFGLA-RLGPSDGLS 264
+ + A GL ++HE I+ D K NI+ + + + K+ DFGLA +L P D +
Sbjct: 152 INYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-DEIV 207
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
V+TA T +AAPE + + + +D+W+ GV Y L++G P
Sbjct: 208 KVTTA---TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ VL + HPN++KL E E + L+ E + + D + + +
Sbjct: 97 TEIGVLLRLSHPNIIKL----KEIFETPTEISLVLELVTGGELFDRIVEKGYYSE----- 147
Query: 208 LKIAQDAAR----GLAYLHEGMDFQIIFRDFKSSNILLD---EQWNAKLSDFGLARLGPS 260
+ A DA + +AYLHE I+ RD K N+L K++DFGL+++
Sbjct: 148 -RDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203
Query: 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
L V GT GY APE ++ + D+WS G+ Y L+ G P R
Sbjct: 204 QVLMK---TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 51 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 105
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 106 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 161 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 40/280 (14%)
Query: 39 SNTSMSTDRDVRKSGSEFNSQNASDFSS--ESSSRNTFAVLSQRQSNLRVFTFSELKT-A 95
N + + ++S EF ++ DF E+ S+NT A L Q F +KT
Sbjct: 1 GNAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNT-AQLDQ---------FDRIKTLG 50
Query: 96 TKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV 155
T +F R +++ +H + I KQ + L+ + + E +L
Sbjct: 51 TGSFGRVMLVK------------HKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQA 97
Query: 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA 215
V P LVKL + +D+ ++ EY+ + HL + + P + R AQ
Sbjct: 98 VNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQ-IV 151
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
YLH +I+RD K N+L+D+Q +++DFG A+ + + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR-----VKGRTWXLCGTPE 203
Query: 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
APE I + D W+ GV +YE+ G P ++P
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 105
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 106 IKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 163 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 51 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 105
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 106 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 161 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ VV H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L+ Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 162 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 162 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 161
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 162 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 103
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 104 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 161 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 106
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 107 IKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 163
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 164 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 108 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 165 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 106
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 107 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 163
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 164 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 103
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 104 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 160
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 161 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 106
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 107 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 163
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 164 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 105
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 106 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 163 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 108
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 109 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 165
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 166 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ VV H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L+ Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 108 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 165 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 105
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 106 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 163 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGVS-REDIEREVSILKEIQHPNVITL----HEVYENKTDVILILELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKTFMDASALTGIPLPL 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 108 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 165 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEHV-HQDLKTFMDASALTGIPLPL 103
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GLA+ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 104 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 157
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 158 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRW 194
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 86 VFTFSELKTATKNFSRSLMIXXXXXXXXXXXVIRSTEDSHKKIDIAVKQLSRRG-LQGHK 144
VF E + A + + S + V + + +A+K ++ ++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 120
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 121 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 178 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ EV VL +++HPN++KL + +D+R L+ E + D + R + +
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFF--EDKRNY--YLVMECYKGGELFDEIIHRMKFN-EVDA 138
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN---AKLSDFGLARLGPSDGL 263
+ I Q G+ YLH+ I+ RD K N+LL+ + K+ DFGL+ + +
Sbjct: 139 AVIIKQ-VLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN--- 191
Query: 264 SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+GT Y APE ++ + K D+WS GV L+ L+ G P
Sbjct: 192 QKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-H 265
+GL++ H +++ RD K N+L++ + KL+DFGLAR + G+
Sbjct: 105 IKSYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR---AFGVPVR 158
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
T V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 159 TYTHEVVTLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260
T+P + KIA + L +LH + +I RD K SN+L++ K DFG++
Sbjct: 132 TIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
Query: 261 DGLSHVSTAVVGTIGYAAPEYI-----QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP 315
D + G Y APE I Q G + KSDIWS G+ EL R P D
Sbjct: 190 DVAKDIDA---GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYD---- 241
Query: 316 KSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSE 375
W P K+ P+L K + + ++CL + +K RP E
Sbjct: 242 -------SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPE 290
Query: 376 VVE 378
+ +
Sbjct: 291 LXQ 293
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 89 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 144
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 145 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 201
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 202 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 259 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 174 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+A+K ++ ++ E++ E +V+ ++V+L+G ++ G L+I E M
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRG 113
Query: 189 SVQDHLTS--------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
++ +L S A + +++A + A G+AYL+ + + RD + N +
Sbjct: 114 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
+ E + K+ DFG+ R + +D ++ + + +PE ++ G T SD+WSFGV
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 300 LYELIT 305
L+E+ T
Sbjct: 230 LWEIAT 235
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 143 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 194
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 195 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 197
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 198 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+A+K ++ ++ E++ E +V+ ++V+L+G ++ G L+I E M
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRG 113
Query: 189 SVQDHLTS--------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240
++ +L S A + +++A + A G+AYL+ + + RD + N +
Sbjct: 114 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170
Query: 241 LDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
+ E + K+ DFG+ R + +D ++ + + +PE ++ G T SD+WSFGV
Sbjct: 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 300 LYELIT 305
L+E+ T
Sbjct: 230 LWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPAMANN 119
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 120 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 177 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 135 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 186
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 187 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 69 DHPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 122
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R S + I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKW 178
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 180 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 44/266 (16%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 105
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + RD + N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 298 VFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY---SIKLAQK 354
V L+E+ + L E L++ + ++D G Y ++
Sbjct: 220 VVLWEITS---------------LAEQPYQGLSNEQVLKFVMD----GGYLDQPDNCPER 260
Query: 355 LAAVANKCLARQAKGRPKMSEVVEVL 380
+ + C K RP E+V +L
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 123
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 124 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 181 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 198
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 199 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 105
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + RD + N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRDLAARN 160
Query: 239 ILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGV 298
++ + K+ DFG+ R + + + APE ++ G T SD+WSFGV
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 299 FLYELIT 305
L+E+ +
Sbjct: 221 VLWEITS 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 200 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ ++ EV++L ++HPN++ L E E +LI E + + D L
Sbjct: 52 SRRGV-SREDIEREVSILKEIQHPNVITL----HEVYENKTDVILIGELVAGGELFDFLA 106
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSD 251
+ +L + + G+ YLH QI D K NI+L + + K+ D
Sbjct: 107 EK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 162 FGLAH---KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 104
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + RD + N
Sbjct: 105 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRDLAARN 159
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 160 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 218
Query: 298 VFLYELIT 305
V L+E+ +
Sbjct: 219 VVLWEITS 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 200 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 165 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 216
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 217 YRAPE-IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 148 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 199
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 200 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ + ++ + + +P
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPL 105
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 106 IKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 163 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 122
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 123 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 180 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ + ++ + + +P
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPL 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 108 IKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 165 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 210
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 211 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 184
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 185 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAED-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
E+ VL ++H N+V L ED E L+ + + + D + R T +
Sbjct: 56 EIAVLKKIKHENIVTL-----EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK-DAS 109
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL-LDEQWNAKL--SDFGLARLGPSDGLS 264
L I Q + YLHE I+ RD K N+L L + N+K+ +DFGL+++ +G+
Sbjct: 110 LVI-QQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGI- 163
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324
+STA GT GY APE + + D WS GV Y L+ G P ++E KL E
Sbjct: 164 -MSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF---YEETESKLFEK 218
Query: 325 VR 326
++
Sbjct: 219 IK 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 207
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 208 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 207
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 208 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 206
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 207 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 69 DHPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 122
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 178
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L+ Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 184
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 185 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 206
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 207 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 183
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 184 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 110
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 66 DHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 119
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 120 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 175
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 69 DHPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 122
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 178
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 29/170 (17%)
Query: 158 HPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARG 217
H N+V L+ D++R + L+++YM H R P + + + Q +
Sbjct: 68 HENIVNLLNVLRADNDRDV--YLVFDYM---ETDLHAVIRANILEPVHKQYVVYQ-LIKV 121
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-------------LGPSDGLS 264
+ YLH G ++ RD K SNILL+ + + K++DFGL+R L ++
Sbjct: 122 IKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 265 H------VSTAVVGTIGYAAPE-YIQTGRLTYKSDIWSFGVFLYELITGR 307
+ + T V T Y APE + + + T D+WS G L E++ G+
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ E+++L + HPN+VKL+ ++ + L++E++ ++ ++ + + +P
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTEN----KLYLVFEHV-DQDLKKFMDASALTGIPLPL 107
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHV 266
+GLA+ H +++ RD K N+L++ + KL+DFGLAR ++
Sbjct: 108 IKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
V T+ Y APE I G Y + DIWS G E++T R
Sbjct: 165 HEVV--TLWYRAPE-ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 141 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 192
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 193 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 71 DHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 124
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 125 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 180
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV +L ++HPN++KL E E ++ E + D + R +
Sbjct: 71 EVELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAA 124
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ---WNAKLSDFGLARLGPSDGLSH 265
+I + G+ Y+H+ I+ RD K NILL+ + + K+ DFGL+ +
Sbjct: 125 RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--- 178
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+GT Y APE ++ G K D+WS GV LY L++G P
Sbjct: 179 KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 147 RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATRW 198
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 199 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 153 LGVVEHPNLVKLIGY---CAEDDERGIQRLLIYEYMPN---RSVQDHLTSRFQATLPWNT 206
L V+ HPN+V+L Y E D R I ++ EY+P+ R +++ R A P
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYY-RRQVAPPPILI 131
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAKLSDFGLA-RLGPSDGLS 264
++ + Q R + LH + RD K N+L++E KL DFG A +L PS+
Sbjct: 132 KVFLFQ-LIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP-- 187
Query: 265 HVSTAVVGTIGYAAPEYI-QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323
+ A + + Y APE I T DIWS G E++ G P+ R S +L E
Sbjct: 188 --NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGD-NSAGQLHE 243
Query: 324 WVR 326
VR
Sbjct: 244 IVR 246
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRW 185
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 186 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 89 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 144
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 145 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 201
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 202 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 259 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 151
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 152 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 209 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 72 DHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 125
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 181
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 449 DHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 502
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 558
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 128 IDIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG--IQRLLIYE 183
+ +AVK L + +E++ E + +HP++ KL+G +G ++I
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 184 YMPNRSVQDHL-TSRFQAT---LPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239
+M + + L SR LP T ++ D A G+ YL I RD + N
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNC 168
Query: 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVF 299
+L E ++DFGL+R S A + + A E + T SD+W+FGV
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT 228
Query: 300 LYELIT-GRRP 309
++E++T G+ P
Sbjct: 229 MWEIMTRGQTP 239
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EV++L V HPN++ L + E +LI E + + D L
Sbjct: 53 SRRGV-CREEIEREVSILRQVLHPNIITL----HDVYENRTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + G+ YLH +I D K NI LLD+ + KL D
Sbjct: 108 QK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA DG+ + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGLAH-EIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 40 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 99
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 100 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 152
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 210 WSVGCIMGEMIKG 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 110
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 110
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 74 DHPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 127
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 128 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 183
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 109
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 167 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 97 DHPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 150
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 206
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 51 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 106
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 52 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 107
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 108 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 165 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 222 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 51 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 106
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 50 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 105
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 106 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 162
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 163 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 219
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 220 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 273
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 52 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 107
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 108 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 165 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 222 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 116
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 172
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 173 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R K W E + V H N++ I Q LI Y
Sbjct: 33 NVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
S+ D+L TL + L+I A GLA+LH E Q I RD KS NIL+
Sbjct: 90 MGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 242 DEQWNAKLSDFGLARLG--PSDGLSHVSTAVVGTIGYAAPEY----IQTGRL-TYKS-DI 293
+ ++D GLA + ++ L + VGT Y APE IQ +YK DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206
Query: 294 WSFGVFLYEL 303
W+FG+ L+E+
Sbjct: 207 WAFGLVLWEV 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 142 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRW 193
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 194 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + T V T
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATRW 189
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 190 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 69 DHPHIVKLIGVITENPV-----WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 122
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 178
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R K W E + V H N++ I Q LI Y
Sbjct: 62 NVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 118
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
S+ D+L TL + L+I A GLA+LH E Q I RD KS NIL+
Sbjct: 119 MGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 175
Query: 242 DEQWNAKLSDFGLARLG--PSDGLSHVSTAVVGTIGYAAPEY----IQTGRL-TYK-SDI 293
+ ++D GLA + ++ L + VGT Y APE IQ +YK DI
Sbjct: 176 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 235
Query: 294 WSFGVFLYEL 303
W+FG+ L+E+
Sbjct: 236 WAFGLVLWEV 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV +L ++HPN++KL E E ++ E + D + R +
Sbjct: 71 EVELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAA 124
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ---WNAKLSDFGLARLGPSDGLSH 265
+I + G+ Y+H+ I+ RD K NILL+ + + K+ DFGL+ +
Sbjct: 125 RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--- 178
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+GT Y APE ++ G K D+WS GV LY L++G P
Sbjct: 179 KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 45 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 100
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 101 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 157
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 158 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 215 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 45 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 100
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 101 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 157
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 158 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 215 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR 216
+HP++VKLIG E+ +I E ++ L R + +L + + A +
Sbjct: 449 DHPHIVKLIGVITENP-----VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLST 502
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGY 276
LAYL + + RD + N+L+ KL DFGL+R D + ++ I +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKW 558
Query: 277 AAPEYIQTGRLTYKSDIWSFGVFLYE-LITGRRPL 310
APE I R T SD+W FGV ++E L+ G +P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 44 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 99
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 100 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 156
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 157 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 214 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L+ Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 51 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 106
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 107 VMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R K W E + V H N++ I Q LI Y
Sbjct: 33 NVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
S+ D+L TL + L+I A GLA+LH E Q I RD KS NIL+
Sbjct: 90 MGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 242 DEQWNAKLSDFGLARLG--PSDGLSHVSTAVVGTIGYAAPEY----IQTGRL-TYKS-DI 293
+ ++D GLA + ++ L + VGT Y APE IQ +YK DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206
Query: 294 WSFGVFLYEL 303
W+FG+ L+E+
Sbjct: 207 WAFGLVLWEV 216
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV +L ++HPN++KL E E ++ E + D + R +
Sbjct: 71 EVELLKKLDHPNIMKLF----EILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAA 124
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ---WNAKLSDFGLARLGPSDGLSH 265
+I + G+ Y+H+ I+ RD K NILL+ + + K+ DFGL+ +
Sbjct: 125 RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--- 178
Query: 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+GT Y APE ++ G K D+WS GV LY L++G P
Sbjct: 179 KMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR + +V+T
Sbjct: 159 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 211 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ D+GLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR H + G +
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVA 204
Query: 276 ---YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 205 TRWYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 145 EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTS-------- 196
E++ E +V+ ++V+L+G ++ G L+I E M ++ +L S
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQ----GQPTLVIMELMTRGDLKSYLRSLRPEMENN 116
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
A + +++A + A G+AYL+ + + RD + N + E + K+ DFG+ R
Sbjct: 117 PVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
Query: 257 -LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
+ +D ++ + + +PE ++ G T SD+WSFGV L+E+ T
Sbjct: 174 DIYETDYYRKGGKGLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 44 NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV----YL 99
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 100 VMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 156
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 157 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 214 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR H + G +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 184
Query: 276 ---YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 185 TRWYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR H + G +
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 184
Query: 276 ---YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 185 TRWYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 39/266 (14%)
Query: 129 DIAVKQLSRRGLQGHK--EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
DI VK L R K ++ E L + HPN++ ++G C LI + P
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITHWXP 92
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246
S+ + L + + +K A D ARG A+LH ++ I S ++ +DE
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXT 151
Query: 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLY 301
A++S + S G + + APE +Q T R + +D WSF V L+
Sbjct: 152 ARISXADVKFSFQSPGRXYAP-------AWVAPEALQKKPEDTNRRS--ADXWSFAVLLW 202
Query: 302 ELITGRRPLD--RNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVA 359
EL+T P N + LE +RP + ++ ++ +
Sbjct: 203 ELVTREVPFADLSNXEIGXKVALEGLRPTIPPG------------------ISPHVSKLX 244
Query: 360 NKCLARQAKGRPKMSEVVEVLNKIVD 385
C RPK +V +L K D
Sbjct: 245 KICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 51 NVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDV----YL 106
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 107 VMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EVN+L + HPN++ L E +LI E + + D L
Sbjct: 53 SRRGVS-REEIEREVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ----WNAKLSD 251
+ +L + + + G+ YLH +I D K NI+L ++ KL D
Sbjct: 108 EK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLID 162
Query: 252 FGLA-RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FG+A ++ + ++ GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGIAHKIEAGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 51 NVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDV----YL 106
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 107 VMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 235
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 293 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EY NR++ D + S + ++ + L+Y+H II RD K NI +D
Sbjct: 95 EYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFID 150
Query: 243 EQWNAKLSDFGLAR----------------LGPSDGLSHVSTAVVGTIGYAAPEYIQ-TG 285
E N K+ DFGLA+ G SD L T+ +GT Y A E + TG
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL----TSAIGTAMYVATEVLDGTG 206
Query: 286 RLTYKSDIWSFGVFLYELI 304
K D++S G+ +E+I
Sbjct: 207 HYNEKIDMYSLGIIFFEMI 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ I++AVK+LSR Q H K E+ +L V H N++ L+ + +
Sbjct: 39 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L L + G+ +LH II RD
Sbjct: 99 EEFQDV----YLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR ++ + T V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTACTNFM---MTPYVVTRYYRAPEVILGMGYAANVDI 208
Query: 294 WSFGVFLYELITG 306
WS G + EL+ G
Sbjct: 209 WSVGCIMGELVKG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EVN+L + HPN++ L E +LI E + + D L
Sbjct: 46 SRRGVS-REEIEREVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLA 100
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + + + G+ YLH +I D K NI LLD+ KL D
Sbjct: 101 EK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLID 155
Query: 252 FGLA-RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FG+A ++ + ++ GT + APE + L ++D+WS GV Y L++G P
Sbjct: 156 FGIAHKIEAGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGLAR H + G +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVA 180
Query: 276 ---YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 181 TRWYRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ +L + HP ++K+ + +D ++ E M + D + N R
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVG--------NKR 249
Query: 208 LKIAQ------DAARGLAYLHEGMDFQIIFRDFKSSNILL---DEQWNAKLSDFGLARLG 258
LK A + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
Query: 259 PSDGLSHVSTAVVGTIGYAAPE-YIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNR 314
G + + + GT Y APE + G Y D WS GV L+ ++G P +R
Sbjct: 307 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 129 DIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDERGIQRLLIYEYM 185
++A+K+LSR Q H K E+ ++ V H N++ L+ + + Q + Y+
Sbjct: 51 NVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDV----YL 106
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
+ +L Q L + G+ +LH II RD K SNI++
Sbjct: 107 VMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI- 304
K+ DFGLAR + G S + T V T Y APE I DIWS G + E++
Sbjct: 164 TLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 305 -----TGRRPLDR-NR---------PKSEQKLLEWVRPHLTDAKKFTMILDPKL 343
GR +D+ N+ P+ +KL VR ++ + K+ + PKL
Sbjct: 221 HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EVN+L + HPN++ L E +LI E + + D L
Sbjct: 67 SRRGVS-REEIEREVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLA 121
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + + + G+ YLH +I D K NI LLD+ KL D
Sbjct: 122 EK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLID 176
Query: 252 FGLA-RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FG+A ++ + ++ GT + APE + L ++D+WS GV Y L++G P
Sbjct: 177 FGIAHKIEAGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 41 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 100
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 101 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 153
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + V T Y APE I DI
Sbjct: 154 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDI 210
Query: 294 WSFGVFLYELITG 306
WS G + E+I G
Sbjct: 211 WSVGCIMGEMIKG 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 106
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + R+ + N
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRNLAARN 161
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 162 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 220
Query: 298 VFLYELIT 305
V L+E+ +
Sbjct: 221 VVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 22/188 (11%)
Query: 130 IAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNR 188
+AVK ++ L+ E++ E +V+ ++V+L+G + +G L++ E M +
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHG 105
Query: 189 SVQDHLTS----------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
++ +L S R TL +++A + A G+AYL+ + + R+ + N
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAK---KFVHRNLAARN 160
Query: 239 ILLDEQWNAKLSDFGLAR-LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297
++ + K+ DFG+ R + +D ++ + + APE ++ G T SD+WSFG
Sbjct: 161 CMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 298 VFLYELIT 305
V L+E+ +
Sbjct: 220 VVLWEITS 227
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ +L + H NLV L+ C ++ + L++E++ + + D F L +
Sbjct: 74 EIKLLKQLRHENLVNLLEVC----KKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQ 127
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
K G+ + H II RD K NIL+ + KL DFG AR + G V
Sbjct: 128 KYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYD 182
Query: 269 AVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITG 306
V T Y APE + G + Y D+W+ G + E+ G
Sbjct: 183 DEVATRWYRAPELL-VGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DFGL R + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMP 186
++A+K++ LQ + E+ ++ +V+HPN+V L Y D + + L+ EY+P
Sbjct: 66 EVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121
Query: 187 N---RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243
R+ + + ++ + T+P R LAY+H I RD K N+LLD
Sbjct: 122 ETVYRASRHY--AKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDP 176
Query: 244 QWNA-KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFL 300
KL DFG A++ + G +VS + + Y APE I G Y + DIWS G +
Sbjct: 177 PSGVLKLIDFGSAKILIA-GEPNVSX--ICSRYYRAPELI-FGATNYTTNIDIWSTGCVM 232
Query: 301 YELITGR 307
EL+ G+
Sbjct: 233 AELMQGQ 239
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 13/193 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ I++AVK+LSR Q H K E+ +L V H N++ L+ + +
Sbjct: 37 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTL 96
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L L + G+ +LH II RD
Sbjct: 97 EEFQDV----YLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 149
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR ++ + T V T Y APE I DI
Sbjct: 150 LKPSNIVVKSDCTLKILDFGLARTASTNFM---MTPYVVTRYYRAPEVILGMGYKENVDI 206
Query: 294 WSFGVFLYELITG 306
WS G + EL+ G
Sbjct: 207 WSVGCIMGELVKG 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
+GL Y+H II RD K N+ ++E K+ DFGLAR S+ V T
Sbjct: 139 KGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 276 YAAPEYIQT-GRLTYKSDIWSFGVFLYELITGR 307
Y APE I R T DIWS G + E+ITG+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSDGLSHVSTAVVG 272
RGL Y+H Q+I RD K SN+L++E K+ DFG+AR P++ + T V
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH-QYFMTEYVA 224
Query: 273 TIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRR 308
T Y APE + + T D+WS G E++ R+
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSDGLSHVSTAVVG 272
RGL Y+H Q+I RD K SN+L++E K+ DFG+AR P++ + T V
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH-QYFMTEYVA 225
Query: 273 TIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRR 308
T Y APE + + T D+WS G E++ R+
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++ +++HP++V+L+ + D +++E+M + + R A ++ +
Sbjct: 78 EASICHMLKHPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 209 --KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSDG 262
+ L Y H D II RD K +LL + N+ KL FG+A +LG S G
Sbjct: 134 ASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-G 189
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
L V+ VGT + APE ++ D+W GV L+ L++G P
Sbjct: 190 L--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E ++ +++HP++V+L+ + D +++E+M + + R A ++ +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 209 --KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSDG 262
+ L Y H D II RD K +LL + N+ KL FG+A +LG S G
Sbjct: 132 ASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-G 187
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
L V+ VGT + APE ++ D+W GV L+ L++G P
Sbjct: 188 L--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ FGLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 121 TEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
T++ KI I K+LS R H++ E + +++HPN+V+L +E+ G L
Sbjct: 56 TQEYAAKI-INTKKLSARD---HQKLEREARICRLLKHPNIVRLHDSISEE---GFH-YL 107
Query: 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDF----QIIFRDFKS 236
+++ + + + + +R + DA+ + + E ++ I+ RD K
Sbjct: 108 VFDLVTGGELFEDIVAREYYS---------EADASHCIHQILESVNHIHQHDIVHRDLKP 158
Query: 237 SNILLDEQWNA---KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
N+LL + KL+DFGLA G GT GY +PE ++ DI
Sbjct: 159 ENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDI 216
Query: 294 WSFGVFLYELITGRRPL-DRNRPKSEQKL 321
W+ GV LY L+ G P D ++ K Q++
Sbjct: 217 WACGVILYILLVGYPPFWDEDQHKLYQQI 245
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ DF LAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 14/139 (10%)
Query: 180 LIYEYMPNRSVQDH------LTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
+IYEYM N S+ L + +P I + +Y+H + I RD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRD 177
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYI--QTGRLTYKS 291
K SNIL+D+ KLSDFG + + GT + PE+ ++ K
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIK----GSRGTYEFMPPEFFSNESSYNGAKV 233
Query: 292 DIWSFGVFLYELITGRRPL 310
DIWS G+ LY + P
Sbjct: 234 DIWSLGICLYVMFYNVVPF 252
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 24/105 (22%)
Query: 217 GLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR----------------LGPS 260
L+Y+H II RD K NI +DE N K+ DFGLA+ G S
Sbjct: 128 ALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 261 DGLSHVSTAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELI 304
D L T+ +GT Y A E + TG K D++S G+ +E+I
Sbjct: 185 DNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ D GLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 43/208 (20%)
Query: 118 IRSTEDSHKKIDIAVKQLSR--RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
+ S D+ + +AVK+LSR + L + E+ +L ++H N++ L+
Sbjct: 36 VCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV-------- 87
Query: 176 IQRLLIYEYMPNRSVQDH-----LTSRFQATLPWNTRLKIAQDA---------ARGLAYL 221
+ P S++D +T+ A L + + D RGL Y+
Sbjct: 88 --------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEY 281
H II RD K SN+ ++E ++ DFGLAR + T V T Y APE
Sbjct: 140 HSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWYRAPE- 190
Query: 282 IQTGRLTYKS--DIWSFGVFLYELITGR 307
I + Y DIWS G + EL+ G+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 44 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 103
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 104 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 156
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I D+
Sbjct: 157 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 294 WSFGVFLYELITGR 307
WS G + E++ +
Sbjct: 214 WSVGCIMGEMVCHK 227
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 223 EGMDF----QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAA 278
+GM+F + I RD + NILL E+ K+ DFGLAR D + + A
Sbjct: 204 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 263
Query: 279 PEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDA 332
PE I T +SD+WSFGV L+E+ + G P + E ++L E R P T
Sbjct: 264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 323
Query: 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
+ + +LD C + RP SE+VE L ++ A
Sbjct: 324 EMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQA 356
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 223 EGMDF----QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAA 278
+GM+F + I RD + NILL E+ K+ DFGLAR D + + A
Sbjct: 202 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 261
Query: 279 PEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDA 332
PE I T +SD+WSFGV L+E+ + G P + E ++L E R P T
Sbjct: 262 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 321
Query: 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
+ + +LD C + RP SE+VE L ++ A
Sbjct: 322 EMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQA 354
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 33 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 92
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 93 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 145
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + T V T Y APE I D+
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 202
Query: 294 WSFGVFLYELITGR 307
WS G + E++ +
Sbjct: 203 WSVGCIMGEMVCHK 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R + W E + V H N++ I +D+ Q L+ +Y
Sbjct: 67 EVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
+ S+ D+L +R+ T+ +K+A A GLA+LH E + Q I RD KS NIL+
Sbjct: 124 HGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 180
Query: 242 DEQWNAKLSDFGLA--RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG------RLTYKSDI 293
+ ++D GLA +D + VGT Y APE + ++DI
Sbjct: 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 240
Query: 294 WSFGVFLYEL 303
++ G+ +E+
Sbjct: 241 YAMGLVFWEI 250
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 223 EGMDF----QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAA 278
+GM+F + I RD + NILL E+ K+ DFGLAR D + + A
Sbjct: 211 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 270
Query: 279 PEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDA 332
PE I T +SD+WSFGV L+E+ + G P + E ++L E R P T
Sbjct: 271 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 330
Query: 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
+ + +LD C + RP SE+VE L ++ A
Sbjct: 331 EMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQA 363
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R H++ E + +++HPN+V+L +E+ LI++ +
Sbjct: 55 INTKKLSARD---HQKLEREARICRLLKHPNIVRLHDSISEEG----HHYLIFDLVTGGE 107
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGM----DFQIIFRDFKSSNILLDEQW 245
+ + + +R + DA+ + + E + ++ RD K N+LL +
Sbjct: 108 LFEDIVAREYYS---------EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKL 158
Query: 246 NA---KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
KL+DFGLA +G GT GY +PE ++ D+W+ GV LY
Sbjct: 159 KGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 303 LITGRRPL---DRNR 314
L+ G P D++R
Sbjct: 217 LLVGYPPFWDEDQHR 231
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ D GLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 223 EGMDF----QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAA 278
+GM+F + I RD + NILL E+ K+ DFGLAR D + + A
Sbjct: 209 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 268
Query: 279 PEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE--QKLLEWVR---PHLTDA 332
PE I T +SD+WSFGV L+E+ + G P + E ++L E R P T
Sbjct: 269 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP 328
Query: 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386
+ + +LD C + RP SE+VE L ++ A
Sbjct: 329 EMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQA 361
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
RGL Y+H II RD K SN+ ++E K+ D GLAR + T V T
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATRW 187
Query: 276 YAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
Y APE I + Y DIWS G + EL+TGR
Sbjct: 188 YRAPE-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 36/174 (20%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSH--VSTAVVGTIGYAAPEYIQTG 285
++ RD K NIL+D + AKL DFG S L H T GT Y+ PE+I
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFG------SGALLHDEPYTDFDGTRVYSPPEWISRH 213
Query: 286 RL-TYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLE 344
+ + +WS G+ LY+++ G P +R+ Q++LE E
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERD-----QEILE-------------------AE 249
Query: 345 GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAAETGTPQTPLKN 398
+ ++ A+ +CLA + RP + E+ +L+ + P P K
Sbjct: 250 LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEI--LLDPWMQTPAEDVPLNPSKG 301
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNT 206
+ EV VL ++HPN++KL Y +D+R L+ E + D + R Q +
Sbjct: 52 LDEVAVLKQLDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILR-QKFSEVDA 106
Query: 207 RLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN---AKLSDFGLARLGPSDGL 263
+ I + G YLH+ I+ RD K N+LL+ + K+ DFGL+ G
Sbjct: 107 AV-IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG- 161
Query: 264 SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+GT Y APE ++ + K D+WS GV LY L+ G P
Sbjct: 162 --KMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R + W E + V H N++ I +D+ Q L+ +Y
Sbjct: 28 EVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
+ S+ D+L +R+ T+ +K+A A GLA+LH E + Q I RD KS NIL+
Sbjct: 85 HGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 141
Query: 242 DEQWNAKLSDFGLA--RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG------RLTYKSDI 293
+ ++D GLA +D + VGT Y APE + ++DI
Sbjct: 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201
Query: 294 WSFGVFLYEL 303
++ G+ +E+
Sbjct: 202 YAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R + W E + V H N++ I +D+ Q L+ +Y
Sbjct: 54 EVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 110
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
+ S+ D+L +R+ T+ +K+A A GLA+LH E + Q I RD KS NIL+
Sbjct: 111 HGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 167
Query: 242 DEQWNAKLSDFGLA--RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG------RLTYKSDI 293
+ ++D GLA +D + VGT Y APE + ++DI
Sbjct: 168 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 227
Query: 294 WSFGVFLYEL 303
++ G+ +E+
Sbjct: 228 YAMGLVFWEI 237
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VGT+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI- 274
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 275 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R + W E + V H N++ I +D+ Q L+ +Y
Sbjct: 29 EVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 85
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
+ S+ D+L +R+ T+ +K+A A GLA+LH E + Q I RD KS NIL+
Sbjct: 86 HGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 142
Query: 242 DEQWNAKLSDFGLA--RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG------RLTYKSDI 293
+ ++D GLA +D + VGT Y APE + ++DI
Sbjct: 143 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 202
Query: 294 WSFGVFLYEL 303
++ G+ +E+
Sbjct: 203 YAMGLVFWEI 212
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 232 RDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS 291
RD K NIL+ A L DFG+A + L+ + VGT+ Y APE TY++
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYXAPERFSESHATYRA 216
Query: 292 DIWSFGVFLYELITGRRP 309
DI++ LYE +TG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTR 207
TE+ ++ H N++ I + Q LI +Y N S+ D+L S TL +
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSM 136
Query: 208 LKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILLDEQWNAKLSDFGLAR--LGPS 260
LK+A + GL +LH E Q I RD KS NIL+ + ++D GLA + +
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196
Query: 261 DGLSHVSTAVVGTIGYAAPEYI--QTGRLTYKS----DIWSFGVFLYEL 303
+ + VGT Y PE + R ++S D++SFG+ L+E+
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R Q + E + ++HPN+V+L E+ L+++ +
Sbjct: 62 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEES----FHYLVFDLVTGGE 114
Query: 190 VQDHLTSR-FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA- 247
+ + + +R F + + + Q +AY H I+ R+ K N+LL +
Sbjct: 115 LFEDIVAREFYSEADASHCI---QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 168
Query: 248 --KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
KL+DFGLA + +D S GT GY +PE ++ + DIW+ GV LY L+
Sbjct: 169 AVKLADFGLA-IEVND--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
Query: 306 GRRPL 310
G P
Sbjct: 226 GYPPF 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 34/179 (18%)
Query: 214 AARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR--LGPSDGLSHVSTAVV 271
ARG+ +L + I RD + NILL E K+ DFGLAR D + T +
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRP-----LDRNRPKSEQKLLEWV 325
+ + APE I + KSD+WS+GV L+E+ + G P +D + ++ +
Sbjct: 264 -PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMR 322
Query: 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384
P + + + ++LD C R K RP+ +E+VE L ++
Sbjct: 323 APEYSTPEIYQIMLD---------------------CWHRDPKERPRFAELVEKLGDLL 360
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R + W E + V H N++ I +D+ Q L+ +Y
Sbjct: 31 EVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 87
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
+ S+ D+L +R+ T+ +K+A A GLA+LH E + Q I RD KS NIL+
Sbjct: 88 HGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 144
Query: 242 DEQWNAKLSDFGLA--RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG------RLTYKSDI 293
+ ++D GLA +D + VGT Y APE + ++DI
Sbjct: 145 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 204
Query: 294 WSFGVFLYEL 303
++ G+ +E+
Sbjct: 205 YAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVV--EHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
++AVK S R + W E + V H N++ I +D+ Q L+ +Y
Sbjct: 34 EVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 90
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQ----IIFRDFKSSNILL 241
+ S+ D+L +R+ T+ +K+A A GLA+LH E + Q I RD KS NIL+
Sbjct: 91 HGSLFDYL-NRYTVTV--EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 147
Query: 242 DEQWNAKLSDFGLA--RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG------RLTYKSDI 293
+ ++D GLA +D + VGT Y APE + ++DI
Sbjct: 148 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 207
Query: 294 WSFGVFLYEL 303
++ G+ +E+
Sbjct: 208 YAMGLVFWEI 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VGT+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQIS 275
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 276 -------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQG E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 48 VAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 188 --RSVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 104 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 158
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 159 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 210
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 211 CVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQG E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 48 VAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 188 --RSVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 104 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 158
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 159 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 210
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 211 CVLAELLLGQ 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
EV VL ++HPN++KL Y +D+R L+ E + D + R Q + +
Sbjct: 71 EVAVLKQLDHPNIMKL--YEFFEDKR--NYYLVMEVYRGGELFDEIILR-QKFSEVDAAV 125
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN---AKLSDFGLARLGPSDGLSH 265
I + G YLH+ I+ RD K N+LL+ + K+ DFGL+ +H
Sbjct: 126 -IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS--------AH 173
Query: 266 VSTAV-----VGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+GT Y APE ++ + K D+WS GV LY L+ G P
Sbjct: 174 FEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 43/208 (20%)
Query: 118 IRSTEDSHKKIDIAVKQLSR--RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
+ S D+ + +AVK+LSR + L + E+ +L ++H N++ L+
Sbjct: 44 VCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV-------- 95
Query: 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAA--------------RGLAYL 221
+ P S++D TL I + A RGL Y+
Sbjct: 96 --------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEY 281
H II RD K SN+ ++E ++ DFGLAR + T V T Y APE
Sbjct: 148 HSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPE- 198
Query: 282 IQTGRLTYKS--DIWSFGVFLYELITGR 307
I + Y DIWS G + EL+ G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 43/208 (20%)
Query: 118 IRSTEDSHKKIDIAVKQLSR--RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175
+ S D+ + +AVK+LSR + L + E+ +L ++H N++ L+
Sbjct: 44 VCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV-------- 95
Query: 176 IQRLLIYEYMPNRSVQDH-----LTSRFQATLPWNTRLKIAQDA---------ARGLAYL 221
+ P S++D +T+ A L + + D RGL Y+
Sbjct: 96 --------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 222 HEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEY 281
H II RD K SN+ ++E ++ DFGLAR + T V T Y APE
Sbjct: 148 HSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWYRAPE- 198
Query: 282 IQTGRLTYKS--DIWSFGVFLYELITGR 307
I + Y DIWS G + EL+ G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQ + E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 82 VAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 188 R--SVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 138 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 192
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 193 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 244
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 245 CVLAELLLGQ 254
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VGT+ Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQIS 228
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 229 -------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQG E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 48 VAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA 103
Query: 188 RS--VQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 104 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 158
Query: 245 WNA-KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLY 301
KL DFG A+ G +VS + + Y APE I G Y S D+WS G L
Sbjct: 159 TAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLA 214
Query: 302 ELITGR 307
EL+ G+
Sbjct: 215 ELLLGQ 220
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQ + E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 84 VAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 139
Query: 188 R--SVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 140 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 194
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 195 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 246
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 247 CVLAELLLGQ 256
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EV++L V H N++ L + E +LI E + + D L
Sbjct: 53 SRRGV-SREEIEREVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + G+ YLH +I D K NI LLD+ + KL D
Sbjct: 108 QK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA DG+ + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGLAH-EIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 126 KKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYM 185
KKI + + ++ G+ ++ + E+ +L + HPN++ L+ L++++M
Sbjct: 41 KKIKLGHRSEAKDGI--NRTALREIKLLQELSHPNIIGLLDAFGHKSNIS----LVFDFM 94
Query: 186 PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245
++ + P + + + +GL YLH+ I+ RD K +N+LLDE
Sbjct: 95 -ETDLEVIIKDNSLVLTPSHIKAYMLM-TLQGLEYLHQ---HWILHRDLKPNNLLLDENG 149
Query: 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL-TYKSDIWSFGVFLYELI 304
KL+DFGLA+ S ++ V T Y APE + R+ D+W+ G L EL+
Sbjct: 150 VLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQ + E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 86 VAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 141
Query: 188 R--SVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 142 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 196
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 197 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 248
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 249 CVLAELLLGQ 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQ + E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 82 VAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 137
Query: 188 R--SVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 138 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 192
Query: 245 WNA-KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLY 301
KL DFG A+ G +VS + + Y APE I G Y S D+WS G L
Sbjct: 193 TAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLA 248
Query: 302 ELITGR 307
EL+ G+
Sbjct: 249 ELLLGQ 254
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VGT+ Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQIS 231
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 232 -------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VGT+ Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI- 246
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 247 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EV++L V H N++ L + E +LI E + + D L
Sbjct: 53 SRRGV-SREEIEREVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + G+ YLH +I D K NI LLD+ + KL D
Sbjct: 108 QK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA DG+ + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGLAH-EIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQ + E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 76 VAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 131
Query: 188 R--SVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 132 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 186
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 187 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 238
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 239 CVLAELLLGQ 248
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN 187
+A+K++ LQ + E+ ++ ++H N+V+L Y + + + + L+ +Y+P
Sbjct: 127 VAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 182
Query: 188 R--SVQDHLTSRFQATLP-WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244
V H SR + TLP +L + Q R LAY+H F I RD K N+LLD
Sbjct: 183 TVYRVARHY-SRAKQTLPVIYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPD 237
Query: 245 WNA-KLSDFG----LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFG 297
KL DFG L R P+ +S++ + Y APE I G Y S D+WS G
Sbjct: 238 TAVLKLCDFGSAKQLVRGEPN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAG 289
Query: 298 VFLYELITGR 307
L EL+ G+
Sbjct: 290 CVLAELLLGQ 299
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R Q + E + ++HPN+V+L E+ L+++ +
Sbjct: 39 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEES----FHYLVFDLVTGGE 91
Query: 190 VQDHLTSR-FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA- 247
+ + + +R F + + + Q +AY H I+ R+ K N+LL +
Sbjct: 92 LFEDIVAREFYSEADASHCI---QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 145
Query: 248 --KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
KL+DFGLA + +D S GT GY +PE ++ + DIW+ GV LY L+
Sbjct: 146 AVKLADFGLA-IEVND--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
Query: 306 GRRPL 310
G P
Sbjct: 203 GYPPF 207
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 180 LIYEYMPNRSVQDHLTSR-----FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234
L++E M S+ H+ R +A++ + QD A L +LH + I RD
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLH---NKGIAHRDL 137
Query: 235 KSSNILLDEQWNA---KLSDFGLARLGPSDG-LSHVST----AVVGTIGYAAPEYIQT-- 284
K NIL + K+ DFGL +G S +ST G+ Y APE ++
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 285 ---GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341
+ D+WS GV LY L++G P R S+ W R A + M+ +
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPF-VGRCGSD---CGWDRGEACPACQ-NMLFES 252
Query: 342 KLEGKYSI------KLAQKLAAVANKCLARQAKGRPKMSEVVE 378
EGKY ++ + +K L R AK R ++V++
Sbjct: 253 IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R Q + E + ++HPN+V+L E+ L+++ +
Sbjct: 38 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEES----FHYLVFDLVTGGE 90
Query: 190 VQDHLTSR-FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA- 247
+ + + +R F + + + Q +AY H I+ R+ K N+LL +
Sbjct: 91 LFEDIVAREFYSEADASHCI---QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 144
Query: 248 --KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
KL+DFGLA + +D S GT GY +PE ++ + DIW+ GV LY L+
Sbjct: 145 AVKLADFGLA-IEVND--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 201
Query: 306 GRRPL 310
G P
Sbjct: 202 GYPPF 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R Q + E + ++HPN+V+L E+ L+++ +
Sbjct: 39 INTKKLSARDFQKLER---EARICRKLQHPNIVRLHDSIQEES----FHYLVFDLVTGGE 91
Query: 190 VQDHLTSR-FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA- 247
+ + + +R F + + + Q +AY H I+ R+ K N+LL +
Sbjct: 92 LFEDIVAREFYSEADASHCI---QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGA 145
Query: 248 --KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305
KL+DFGLA + +D S GT GY +PE ++ + DIW+ GV LY L+
Sbjct: 146 AVKLADFGLA-IEVND--SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
Query: 306 GRRPL 310
G P
Sbjct: 203 GYPPF 207
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VGT+ Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI- 226
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 227 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EV++L V H N++ L + E +LI E + + D L
Sbjct: 53 SRRGV-SREEIEREVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + G+ YLH +I D K NI LLD+ + KL D
Sbjct: 108 QK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA DG+ + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGLAH-EIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EV++L V H N++ L + E +LI E + + D L
Sbjct: 53 SRRGV-SREEIEREVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + G+ YLH +I D K NI LLD+ + KL D
Sbjct: 108 QK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA DG+ + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGLAH-EIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 25/139 (17%)
Query: 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242
EY NR++ D + S + ++ + L+Y+H II R+ K NI +D
Sbjct: 95 EYCENRTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRNLKPXNIFID 150
Query: 243 EQWNAKLSDFGLAR----------------LGPSDGLSHVSTAVVGTIGYAAPEYIQ-TG 285
E N K+ DFGLA+ G SD L T+ +GT Y A E + TG
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL----TSAIGTAXYVATEVLDGTG 206
Query: 286 RLTYKSDIWSFGVFLYELI 304
K D +S G+ +E I
Sbjct: 207 HYNEKIDXYSLGIIFFEXI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + V T Y APE I DI
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 294 WSFGVFLYELITGR 307
WS G + E++ +
Sbjct: 209 WSVGCIMGEMVCHK 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 136 SRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT 195
SRRG+ +E EV++L V H N++ L + E +LI E + + D L
Sbjct: 53 SRRGV-SREEIEREVSILRQVLHHNVITL----HDVYENRTDVVLILELVSGGELFDFLA 107
Query: 196 SRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI-LLDEQW---NAKLSD 251
+ +L + G+ YLH +I D K NI LLD+ + KL D
Sbjct: 108 QK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
FGLA DG+ + + GT + APE + L ++D+WS GV Y L++G P
Sbjct: 163 FGLAH-EIEDGVEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPNR--SVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 140
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 141 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 195
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 196 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPNR--SVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 126
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFG----LARLG 258
+L + Q R LAY+H F I RD K N+LLD KL DFG L R
Sbjct: 127 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
P+ +S++ + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 183 PN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267
L++ + +G+ Y+H ++I RD K SNI L + K+ DFGL +DG
Sbjct: 139 LELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KR 192
Query: 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327
T GT+ Y +PE I + + D+++ G+ L EL+
Sbjct: 193 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----------------------- 229
Query: 328 HLTD-----AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380
H+ D +K FT + D G S +K + K L+++ + RP SE++ L
Sbjct: 230 HVCDTAFETSKFFTDLRD----GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPNR--SVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 133
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 134 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 188
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 189 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 99/263 (37%), Gaps = 47/263 (17%)
Query: 158 HPNLVKLIGYCA----EDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQD 213
HPN+V+ + E D + LL+ E + V+ + L +T LKI
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Query: 214 AARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL---GPSDGLSHVSTAV 270
R + ++H II RD K N+LL Q KL DFG A P S A+
Sbjct: 145 TCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 271 V-------GTIGYAAPEYI---QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK 320
V T Y PE I + K DIW+ G LY L + P +
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE--------- 254
Query: 321 LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK----MSEV 376
D K ++ GKYSI V + + + P+ ++EV
Sbjct: 255 ----------DGAKLRIV-----NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299
Query: 377 VEVLNKIVDAAETGTPQTPLKNL 399
V L +I AA P++P+ L
Sbjct: 300 VHQLQEIA-AARNVNPKSPITEL 321
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPNR--SVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 129
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 130 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 184
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 185 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R H++ E + +++HPN+V+L +E+ G L+++ +
Sbjct: 37 INTKKLSARD---HQKLEREARICRLLKHPNIVRLHDSISEE---GFH-YLVFDLVTGGE 89
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDF----QIIFRDFKSSNILLDEQW 245
+ + + +R + DA+ + + E ++ I+ RD K N+LL +
Sbjct: 90 LFEDIVAREYYS---------EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 246 NA---KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
KL+DFGLA D + A GT GY +PE ++ D+W+ GV LY
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILYI 198
Query: 303 LITGRRPL 310
L+ G P
Sbjct: 199 LLVGYPPF 206
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 50/249 (20%)
Query: 149 EVNVLGVVEHPNLVKLIG------YCAEDDERGIQR------LLIYEYMPNRSVQDHLTS 196
EV L ++H N+V G Y E + R + E+ +++ +
Sbjct: 54 EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 197 RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256
R L L++ + +G+ Y+H ++I RD K SNI L + K+ DFGL
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPK 316
+DG S GT+ Y +PE I + + D+++ G+ L EL+
Sbjct: 171 SLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL------------ 215
Query: 317 SEQKLLEWVRPHLTD-----AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP 371
H+ D +K FT + D G S +K + K L+++ + RP
Sbjct: 216 -----------HVCDTAFETSKFFTDLRD----GIISDIFDKKEKTLLQKLLSKKPEDRP 260
Query: 372 KMSEVVEVL 380
SE++ L
Sbjct: 261 NTSEILRTL 269
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPNR--SVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 133
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 134 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 188
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 189 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPNR--SVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 134
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFG----LARLG 258
+L + Q R LAY+H F I RD K N+LLD KL DFG L R
Sbjct: 135 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
P+ +S++ + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 191 PN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 131 AVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY-EYMPNRS 189
A+KQ+ G+ E+ +L ++HPN++ L +R + L Y E+
Sbjct: 52 ALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHI 109
Query: 190 VQDHLTSRFQ---ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL----D 242
++ H S+ LP + G+ YLH ++ RD K +NIL+
Sbjct: 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGP 166
Query: 243 EQWNAKLSDFGLARL--GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS-DIWSFGVF 299
E+ K++D G ARL P L+ + VV T Y APE + R K+ DIW+ G
Sbjct: 167 ERGRVKIADMGFARLFNSPLKPLADLDPVVV-TFWYRAPELLLGARHYTKAIDIWAIGCI 225
Query: 300 LYELIT 305
EL+T
Sbjct: 226 FAELLT 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 122 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 177 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 26/200 (13%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R H++ E + +++HPN+V+L +E+ LI++ +
Sbjct: 44 INTKKLSARD---HQKLEREARICRLLKHPNIVRLHDSISEEG----HHYLIFDLVTGGE 96
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGM----DFQIIFRDFKSSNILLDEQW 245
+ + + +R + DA+ + + E + ++ R+ K N+LL +
Sbjct: 97 LFEDIVAREYYS---------EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL 147
Query: 246 NA---KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
KL+DFGLA +G GT GY +PE ++ D+W+ GV LY
Sbjct: 148 KGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 303 LITGRRPL-DRNRPKSEQKL 321
L+ G P D ++ + Q++
Sbjct: 206 LLVGYPPFWDEDQHRLYQQI 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 194 LTSRFQATLP------WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247
L S+F +P + + +A D+ L Y+H RD K NILLD +
Sbjct: 151 LLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHI 201
Query: 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY-------KSDIWSFGVFL 300
+L+DFG +DG S VGT Y +PE +Q + D W+ GVF
Sbjct: 202 RLADFGSCLKLRADGTVR-SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260
Query: 301 YELITGRRPL 310
YE+ G+ P
Sbjct: 261 YEMFYGQTPF 270
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 122
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 123 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 177
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 178 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 122 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 177 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 122 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 176
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 177 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 121
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFG----LARLG 258
+L + Q R LAY+H F I RD K N+LLD KL DFG L R
Sbjct: 122 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
P+ +S++ + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 178 PN--VSYICSRY-----YRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 149 EVNVLGVVEHPNLVKL--IGYCAEDDERGIQRLLIYEYMPN--RSVQDHLTSRFQATLP- 203
E+ ++ ++H N+V+L Y + + + + L+ +Y+P V H SR + TLP
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY-SRAKQTLPV 125
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA-KLSDFGLARLGPSDG 262
+L + Q R LAY+H F I RD K N+LLD KL DFG A+ G
Sbjct: 126 IYVKLYMYQ-LFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRG 180
Query: 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGR 307
+VS + + Y APE I G Y S D+WS G L EL+ G+
Sbjct: 181 EPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D S V + VG + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQIS 275
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 276 -------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL------------GPSDGL 263
R + LH +I RD K SN+L++ + K+ DFGLAR+ G G+
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 264 SHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
T V T Y APE + T + + D+WS G L EL RRP+ R Q LL
Sbjct: 180 ----TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 13/194 (6%)
Query: 117 VIRSTEDSHKKIDIAVKQLSRRGL-QGH-KEWVTEVNVLGVVEHPNLVKLIG-YCAEDDE 173
++ + D+ + ++A+K+LSR Q H K E+ ++ V H N++ L+ + +
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233
Q + Y+ + +L Q L + G+ +LH II RD
Sbjct: 99 EEFQDV----YIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRD 151
Query: 234 FKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDI 293
K SNI++ K+ DFGLAR + G S + V T Y APE I D+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDL 208
Query: 294 WSFGVFLYELITGR 307
WS G + E++ +
Sbjct: 209 WSVGCIMGEMVCHK 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 21/120 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL------------GPSDGL 263
R + LH +I RD K SN+L++ + K+ DFGLAR+ G G+
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 264 SHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
T V T Y APE + T + + D+WS G L EL RRP+ R Q LL
Sbjct: 180 ----TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 27/171 (15%)
Query: 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYA 277
L +H I+ D K +N L+ + KL DFG+A D V + VGT+ Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 278 APEYIQ-----------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
PE I+ +++ KSD+WS G LY + G+ P Q+++ +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI- 246
Query: 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377
K I+DP E ++ + L V CL R K R + E++
Sbjct: 247 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRS 189
I K+LS R H++ E + +++HPN+V+L +E+ G L+++ +
Sbjct: 37 INTKKLSARD---HQKLEREARICRLLKHPNIVRLHDSISEE---GFH-YLVFDLVTGGE 89
Query: 190 VQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDF----QIIFRDFKSSNILLDEQW 245
+ + + +R + DA+ + + E ++ I+ RD K N+LL +
Sbjct: 90 LFEDIVAREYYS---------EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 246 NA---KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
KL+DFGLA D + A GT GY +PE ++ D+W+ GV LY
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILYI 198
Query: 303 LITGRRPL 310
L+ G P
Sbjct: 199 LLVGYPPF 206
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 220 YLH-EGMDFQIIFRDFKSSNIL-LDEQWNA---KLSDFGLAR-LGPSDGLSHVSTAVVGT 273
YLH +G ++ RD K SNIL +DE N ++ DFG A+ L +GL T
Sbjct: 131 YLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY---T 183
Query: 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
+ APE ++ DIWS GV LY ++TG P + +++L
Sbjct: 184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL-LIYEYMPNRSVQD--HLTSRFQATLP 203
+ E+++L ++H N+VKL D +RL L++E++ QD L + L
Sbjct: 48 IREISILKELKHSNIVKLY-----DVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLE 98
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSD 261
T G+AY H D +++ RD K N+L++ + K++DFGLAR G P
Sbjct: 99 SVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITG 306
+H V T+ Y AP+ + G Y + DIWS G E++ G
Sbjct: 156 KYTH----EVVTLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL-LIYEYMPNRSVQD--HLTSRFQATLP 203
+ E+++L ++H N+VKL D +RL L++E++ QD L + L
Sbjct: 48 IREISILKELKHSNIVKLY-----DVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLE 98
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSD 261
T G+AY H D +++ RD K N+L++ + K++DFGLAR G P
Sbjct: 99 SVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITG 306
+H V T+ Y AP+ + G Y + DIWS G E++ G
Sbjct: 156 KYTH----EVVTLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
+GL Y+H ++ RD K N+ ++E K+ DFGLAR ++ T V T
Sbjct: 137 KGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRW 188
Query: 276 YAAPEYIQT-GRLTYKSDIWSFGVFLYELITGR 307
Y APE I + DIWS G + E++TG+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275
+GL Y+H ++ RD K N+ ++E K+ DFGLAR ++ T V T
Sbjct: 155 KGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRW 206
Query: 276 YAAPEYIQT-GRLTYKSDIWSFGVFLYELITGR 307
Y APE I + DIWS G + E++TG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 147 VTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL-LIYEYMPNRSVQD--HLTSRFQATLP 203
+ E+++L ++H N+VKL D +RL L++E++ QD L + L
Sbjct: 48 IREISILKELKHSNIVKLY-----DVIHTKKRLVLVFEHLD----QDLKKLLDVCEGGLE 98
Query: 204 WNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSD 261
T G+AY H D +++ RD K N+L++ + K++DFGLAR G P
Sbjct: 99 SVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITG 306
+H + T+ Y AP+ + G Y + DIWS G E++ G
Sbjct: 156 KYTH----EIVTLWYRAPD-VLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 223
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 273
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 229 IIFRDFKSSNILLDEQWNA---KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG 285
++ RD K N+LL + KL+DFGLA D + A GT GY +PE ++
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKE 181
Query: 286 RLTYKSDIWSFGVFLYELITGRRPL-DRNRPKSEQKL 321
DIW+ GV LY L+ G P D ++ K Q++
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 217
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 173
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 171
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 177
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 178
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 228
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 180 LIYEYMPNRSVQDHLTSR-----FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234
L++E M S+ H+ R +A++ + QD A L +LH + I RD
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLH---NKGIAHRDL 137
Query: 235 KSSNILLDEQWNA---KLSDFGLARLGPSDG-LSHVST----AVVGTIGYAAPEYIQT-- 284
K NIL + K+ DF L +G S +ST G+ Y APE ++
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 285 ---GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341
+ D+WS GV LY L++G P R S+ W R A + M+ +
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPF-VGRCGSD---CGWDRGEACPACQ-NMLFES 252
Query: 342 KLEGKYSI------KLAQKLAAVANKCLARQAKGRPKMSEVVE 378
EGKY ++ + +K L R AK R ++V++
Sbjct: 253 IQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL------------GPSDGL 263
R + LH +I RD K SN+L++ + K+ DFGLAR+ G G+
Sbjct: 123 RAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 264 SHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
V T Y APE + T + + D+WS G L EL RRP+ R Q LL
Sbjct: 180 ----VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 172
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 179
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 229
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 173
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 220 YLHEGMDFQIIFRDFKSSNIL-LDEQWNA---KLSDFGLAR-LGPSDGLSHVSTAVVGTI 274
YLH ++ RD K SNIL +DE N ++ DFG A+ L +GL T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY---TA 184
Query: 275 GYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322
+ APE ++ DIWS GV LY +TG P + +++L
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 187
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 237
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 171
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D+WS GV +Y L+ G P N
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT-----SRFQATLPWNTRLKIA 211
+HPN++ L DD G L+ E M + D + S +A+ +T
Sbjct: 79 QHPNIITLKD--VYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT----- 129
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNIL-LDEQWNA---KLSDFGLAR-LGPSDGLSHV 266
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ L +GL
Sbjct: 130 --IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
T + APE ++ DIWS G+ LY ++ G P + +++L +
Sbjct: 185 PCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI- 240
Query: 327 PHLTDAKKFTM 337
+ KFT+
Sbjct: 241 ----GSGKFTL 247
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 157 EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLT-----SRFQATLPWNTRLKIA 211
+HPN++ L DD G L+ E M + D + S +A+ +T
Sbjct: 79 QHPNIITLKD--VYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT----- 129
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNIL-LDEQWNA---KLSDFGLAR-LGPSDGLSHV 266
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ L +GL
Sbjct: 130 --IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT 184
Query: 267 STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326
T + APE ++ DIWS G+ LY ++ G P + +++L +
Sbjct: 185 PCY---TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI- 240
Query: 327 PHLTDAKKFTM 337
+ KFT+
Sbjct: 241 ----GSGKFTL 247
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-HVSTAVVGTI 274
+GL + H ++ RD K N+L++ KL+DFGLAR + G+ +A V T+
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR---AFGIPVRCYSAEVVTL 165
Query: 275 GYAAPEYIQTGRLTYKS-DIWSFGVFLYELITGRRPL 310
Y P+ + +L S D+WS G EL RPL
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 199 QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-NAKLSDFGLARL 257
Q LP + L A GL YLH +I+ D K+ N+LL +A L DFG A
Sbjct: 179 QGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVC 235
Query: 258 GPSDGLSH---VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
DGL + GT + APE + K D+WS + ++ G P
Sbjct: 236 LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 199 QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-NAKLSDFGLARL 257
Q LP + L A GL YLH +I+ D K+ N+LL +A L DFG A
Sbjct: 160 QGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVC 216
Query: 258 GPSDGLSH---VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
DGL + GT + APE + K D+WS + ++ G P
Sbjct: 217 LQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 18/188 (9%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+I A K++ + ++ + E+ ++ ++HPN+++L Y +D I L+ E
Sbjct: 51 RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL--YETFEDNTDI--YLVMELCT 106
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL---DE 243
+ + + + + +I +D +AY H+ + RD K N L
Sbjct: 107 GGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSP 161
Query: 244 QWNAKLSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
KL DFGL AR P + VGT Y +P+ ++ G + D WS GV +Y
Sbjct: 162 DSPLKLIDFGLAARFKPGKMMR----TKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYV 216
Query: 303 LITGRRPL 310
L+ G P
Sbjct: 217 LLCGYPPF 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 18/188 (9%)
Query: 127 KIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMP 186
+I A K++ + ++ + E+ ++ ++HPN+++L Y +D I L+ E
Sbjct: 34 RIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL--YETFEDNTDI--YLVMELCT 89
Query: 187 NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL---DE 243
+ + + + + +I +D +AY H+ + RD K N L
Sbjct: 90 GGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSP 144
Query: 244 QWNAKLSDFGL-ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYE 302
KL DFGL AR P + VGT Y +P+ ++ G + D WS GV +Y
Sbjct: 145 DSPLKLIDFGLAARFKPGKMMR----TKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYV 199
Query: 303 LITGRRPL 310
L+ G P
Sbjct: 200 LLCGYPPF 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 126 KKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD-----ERGIQRLL 180
K+I + ++L+R + + EV L +EHP +V+ E + + ++
Sbjct: 36 KRIRLPNRELAREKV------MREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89
Query: 181 IYEYMP---NRSVQDHLTSRFQATLPWNTR---LKIAQDAARGLAYLHEGMDFQIIFRDF 234
+Y M +++D + R T+ R L I A + +LH ++ RD
Sbjct: 90 LYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDL 144
Query: 235 KSSNILLDEQWNAKLSDFGLAR-----------LGPSDGLSHVSTAVVGTIGYAAPEYIQ 283
K SNI K+ DFGL L P + T VGT Y +PE I
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR-HTGQVGTKLYMSPEQIH 203
Query: 284 TGRLTYKSDIWSFGVFLYELI 304
++K DI+S G+ L+EL+
Sbjct: 204 GNSYSHKVDIFSLGLILFELL 224
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL-TSRFQATLPWNTR 207
E+++L + H N++ L E E + ++I+E++ + + + TS F+ L
Sbjct: 51 EISILNIARHRNILHL----HESFESMEELVMIFEFISGLDIFERINTSAFE--LNEREI 104
Query: 208 LKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA--KLSDFGLAR-LGPSDGLS 264
+ L +LH I D + NI+ + ++ K+ +FG AR L P D
Sbjct: 105 VSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161
Query: 265 HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL 310
+ TA Y APE Q ++ +D+WS G +Y L++G P
Sbjct: 162 LLFTAP----EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN-AKLSDFGLARLG 258
LP + L A GL YLH +I+ D K+ N+LL + A L DFG A
Sbjct: 161 GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 217
Query: 259 PSDGLSH---VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
DGL + GT + APE + K DIWS + ++ G P
Sbjct: 218 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN-AKLSDFGLARLG 258
LP + L A GL YLH +I+ D K+ N+LL + A L DFG A
Sbjct: 145 GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 201
Query: 259 PSDGLSH---VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
DGL + GT + APE + K DIWS + ++ G P
Sbjct: 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNA--KLSDFGLARLGPSDGLSH 265
+I + + YLH I RD K N+L ++ NA KL+DFG A+ + SH
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSH 217
Query: 266 VS-TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314
S T T Y APE + + D WS GV Y L+ G P N
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 200 ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN-AKLSDFGLARLG 258
LP + L A GL YLH +I+ D K+ N+LL + A L DFG A
Sbjct: 159 GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCL 215
Query: 259 PSDGLSH---VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRP 309
DGL + GT + APE + K DIWS + ++ G P
Sbjct: 216 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 26/194 (13%)
Query: 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLI------GYCAEDDERGIQRL---- 179
+A+K++ Q K + E+ ++ ++H N+VK+ G DD + L
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 180 LIYEYMPNRSVQDHLTSRFQ--ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237
++ EYM + L + + L + RL + Q RGL Y+H ++ RD K +
Sbjct: 99 IVQEYM-----ETDLANVLEQGPLLEEHARLFMYQ-LLRGLKYIHSA---NVLHRDLKPA 149
Query: 238 NILLD-EQWNAKLSDFGLAR-LGPS-DGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDI 293
N+ ++ E K+ DFGLAR + P H+S +V T Y +P + + T D+
Sbjct: 150 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDM 208
Query: 294 WSFGVFLYELITGR 307
W+ G E++TG+
Sbjct: 209 WAAGCIFAEMLTGK 222
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 98/248 (39%), Gaps = 61/248 (24%)
Query: 123 DSHKKIDIAVKQLSR--RGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180
D + + ++A+K+++R L K + E+ +L ++ +++L DD L
Sbjct: 47 DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106
Query: 181 IYEYMPNRSVQD------HLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234
I + + ++ LT T+ +N L G ++HE II RD
Sbjct: 107 IVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLL--------GENFIHES---GIIHRDL 155
Query: 235 KSSNILLDEQWNAKLSDFGLARL-------------------GPSD-GLSHVSTAVVGTI 274
K +N LL++ + K+ DFGLAR GP + L T+ V T
Sbjct: 156 KPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR 215
Query: 275 GYAAPEYIQTGRLTYKS-DIWSFGVFLYELI----------TGRRPL-----------DR 312
Y APE I KS DIWS G EL+ T R PL DR
Sbjct: 216 WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDR 275
Query: 313 NRPKSEQK 320
N K +K
Sbjct: 276 NSKKVHEK 283
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYC---AEDDERGIQRL-LIYEYMPNRSVQDHLTSRFQATLPW 204
E+ +L +++H N+V LI C A R + L++++ + L S
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG--LLSNVLVKFTL 124
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSD 261
+ ++ Q GL Y+H +I+ RD K++N+L+ KL+DFGLAR L +
Sbjct: 125 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQ 319
+ VV T+ Y PE + G Y D+W G + E+ T R P+ + + Q
Sbjct: 182 QPNRYXNRVV-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYC---AEDDERGIQRL-LIYEYMPNRSVQDHLTSRFQATLPW 204
E+ +L +++H N+V LI C A R + L++++ + L S
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTL 124
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSD 261
+ ++ Q GL Y+H +I+ RD K++N+L+ KL+DFGLAR L +
Sbjct: 125 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQ 319
+ VV T+ Y PE + G Y D+W G + E+ T R P+ + + Q
Sbjct: 182 QPNRYXNRVV-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLS-HVSTAVVGTI 274
+GL + H ++ RD K N+L++ KL++FGLAR + G+ +A V T+
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR---AFGIPVRCYSAEVVTL 165
Query: 275 GYAAPEYIQTGRLTYKS-DIWSFGVFLYELITGRRPL 310
Y P+ + +L S D+WS G EL RPL
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYC---AEDDERGIQRL-LIYEYMPNRSVQDHLTSRFQATLPW 204
E+ +L +++H N+V LI C A R + L++++ + L S
Sbjct: 66 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTL 123
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSD 261
+ ++ Q GL Y+H +I+ RD K++N+L+ KL+DFGLAR L +
Sbjct: 124 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQ 319
+ VV T+ Y PE + G Y D+W G + E+ T R P+ + + Q
Sbjct: 181 QPNRYXNRVV-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYC---AEDDERGIQRL-LIYEYMPNRSVQDHLTSRFQATLPW 204
E+ +L +++H N+V LI C A R + L++++ + L S
Sbjct: 67 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTL 124
Query: 205 NTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR---LGPSD 261
+ ++ Q GL Y+H +I+ RD K++N+L+ KL+DFGLAR L +
Sbjct: 125 SEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKS--DIWSFGVFLYELITGRRPLDRNRPKSEQ 319
+ VV T+ Y PE + G Y D+W G + E+ T R P+ + + Q
Sbjct: 182 QPNRYXNRVV-TLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ +L + H N+++L+ ++++ + ++ EY +Q+ L S + P
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQ--KMYMVMEYC-VCGMQEMLDSVPEKRFPVCQAH 112
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
GL YLH I+ +D K N+LL K+S G+A
Sbjct: 113 GYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 269 AVVGTIGYAAPEYIQTGRLTY---KSDIWSFGVFLYELITGRRPLD 311
G+ + PE I G T+ K DIWS GV LY + TG P +
Sbjct: 170 TSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
L+I E M + + R +I +D + +LH I RD K N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPEN 139
Query: 239 ILL---DEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWS 295
+L ++ KL+DFG A+ + L T Y APE + + D+WS
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNALQ----TPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 296 FGVFLYELITGRRPLDRN 313
GV +Y L+ G P N
Sbjct: 196 LGVIMYILLCGFPPFYSN 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238
L+I E M + + R +I +D + +LH I RD K N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPEN 158
Query: 239 ILL---DEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWS 295
+L ++ KL+DFG A+ + L T Y APE + + D+WS
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNALQ----TPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 296 FGVFLYELITGRRPLDRN 313
GV +Y L+ G P N
Sbjct: 215 LGVIMYILLCGFPPFYSN 232
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 233
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 153 LGVVEHPNLVKLIGYCAEDDERGIQ-RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIA 211
L V HP++V++ + D G ++ EY+ +S++ S+ Q LP +
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQ-KLPVAEAIAYL 188
Query: 212 QDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV 271
+ L+YLH +++ D K NI+L E+ KL D G S G +
Sbjct: 189 LEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY------ 238
Query: 272 GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303
GT G+ APE ++TG T +DI++ G L L
Sbjct: 239 GTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 270
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWC 271
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 233
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWC 271
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWC 270
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 205
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 238
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 233
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 206
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 258
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 205
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWC 270
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 149 EVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208
E+ +L VEH N++K++ + +G +L++ ++ + + + P + +
Sbjct: 79 EIAILSRVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYI 135
Query: 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVST 268
+A G L + II RD K NI++ E + KL DFG A L +
Sbjct: 136 FRQLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY--- 187
Query: 269 AVVGTIGYAAPEYIQTGRLTYKS---DIWSFGVFLYELITGRRPL 310
GTI Y APE + Y+ ++WS GV LY L+ P
Sbjct: 188 TFCGTIEYCAPEVLMGN--PYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 225
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 277
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 191
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 206
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 190
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 206
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 190
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 191
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 189
Query: 288 TYKSD-IWSFGVFLYELITGRRPLD------------RNRPKSE-QKLLEWV 325
+S +WS G+ LY+++ G P + R R SE Q L+ W
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 241
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 229 IIFRDFKSSNILLD-EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL 287
++ RD K NIL+D + KL DFG L V T GT Y+ PE+I+ R
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 213
Query: 288 TYKSD-IWSFGVFLYELITGRRPLDRN 313
+S +WS G+ LY+++ G P + +
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFEHD 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,640,359
Number of Sequences: 62578
Number of extensions: 447201
Number of successful extensions: 3814
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 1517
Number of HSP's gapped (non-prelim): 1086
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)