Query 013504
Match_columns 441
No_of_seqs 404 out of 2823
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 04:31:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013504hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.1E-55 2.3E-60 430.9 28.6 291 83-384 61-353 (361)
2 KOG0581 Mitogen-activated prot 100.0 5.5E-52 1.2E-56 384.8 23.1 251 98-378 80-334 (364)
3 KOG0192 Tyrosine kinase specif 100.0 3.6E-51 7.8E-56 396.5 23.4 264 99-392 43-312 (362)
4 KOG0615 Serine/threonine prote 100.0 2.6E-51 5.5E-56 383.0 16.3 254 94-378 169-436 (475)
5 KOG0595 Serine/threonine-prote 100.0 1E-50 2.2E-55 379.4 20.2 251 96-378 9-267 (429)
6 KOG0575 Polo-like serine/threo 100.0 1.1E-50 2.4E-55 396.5 20.7 248 97-378 18-268 (592)
7 KOG0598 Ribosomal protein S6 k 100.0 3.3E-50 7.1E-55 372.9 17.1 243 96-371 24-269 (357)
8 KOG0591 NIMA (never in mitosis 100.0 6.1E-51 1.3E-55 363.2 11.0 258 97-382 19-284 (375)
9 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-48 2.5E-53 378.4 19.6 258 97-386 206-464 (468)
10 KOG0592 3-phosphoinositide-dep 100.0 4.2E-48 9.1E-53 372.6 21.5 255 93-379 69-338 (604)
11 KOG0593 Predicted protein kina 100.0 4E-48 8.7E-53 348.4 13.9 266 97-378 2-283 (396)
12 KOG0198 MEKK and related serin 100.0 1.5E-47 3.3E-52 360.6 17.3 258 97-380 17-277 (313)
13 KOG0616 cAMP-dependent protein 100.0 6.6E-47 1.4E-51 339.8 20.0 237 97-370 44-283 (355)
14 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-46 4.5E-51 366.9 22.4 268 96-385 6-336 (338)
15 KOG0600 Cdc2-related protein k 100.0 1.5E-46 3.2E-51 359.3 19.6 270 96-378 116-399 (560)
16 KOG0694 Serine/threonine prote 100.0 4.8E-46 1E-50 367.9 22.0 244 95-373 366-613 (694)
17 KOG0578 p21-activated serine/t 100.0 1.5E-46 3.3E-51 364.6 17.0 250 97-378 273-522 (550)
18 KOG0583 Serine/threonine prote 100.0 7.2E-46 1.6E-50 362.6 21.9 250 95-378 15-274 (370)
19 KOG0605 NDR and related serine 100.0 2.8E-46 6.2E-51 360.2 18.5 254 95-378 139-444 (550)
20 KOG0661 MAPK related serine/th 100.0 5.9E-47 1.3E-51 359.5 13.0 270 94-379 7-291 (538)
21 KOG0580 Serine/threonine prote 100.0 1.2E-46 2.6E-51 328.9 12.6 250 96-379 21-273 (281)
22 KOG0582 Ste20-like serine/thre 100.0 4E-45 8.6E-50 344.6 21.6 267 97-383 26-299 (516)
23 KOG0610 Putative serine/threon 100.0 3.2E-45 6.8E-50 342.7 20.7 254 97-378 77-391 (459)
24 KOG0193 Serine/threonine prote 100.0 9.1E-46 2E-50 360.5 16.8 264 93-386 388-656 (678)
25 KOG1026 Nerve growth factor re 100.0 5.7E-46 1.2E-50 376.4 15.0 267 97-387 486-766 (774)
26 KOG0597 Serine-threonine prote 100.0 7.8E-46 1.7E-50 357.4 14.7 247 97-378 2-250 (808)
27 cd05106 PTKc_CSF-1R Catalytic 100.0 8.1E-45 1.8E-49 360.1 21.0 266 96-384 37-373 (374)
28 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-44 2.6E-49 359.1 21.6 265 96-383 34-374 (375)
29 KOG0585 Ca2+/calmodulin-depend 100.0 8.6E-45 1.9E-49 344.4 17.4 265 88-381 88-374 (576)
30 PHA02988 hypothetical protein; 100.0 5.3E-44 1.1E-48 341.2 22.9 250 103-384 26-280 (283)
31 KOG0588 Serine/threonine prote 100.0 7.6E-45 1.7E-49 356.9 17.1 248 97-379 12-263 (786)
32 KOG0659 Cdk activating kinase 100.0 2E-44 4.3E-49 319.4 17.9 266 97-379 2-281 (318)
33 cd05631 STKc_GRK4 Catalytic do 100.0 6.7E-44 1.4E-48 340.8 22.4 252 98-378 1-260 (285)
34 KOG0660 Mitogen-activated prot 100.0 2.1E-44 4.5E-49 333.0 17.8 282 93-385 18-318 (359)
35 KOG0201 Serine/threonine prote 100.0 1.2E-45 2.7E-50 347.8 9.7 249 97-378 13-262 (467)
36 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-43 2.5E-48 342.3 23.4 268 97-381 5-303 (304)
37 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-43 3.3E-48 337.5 23.3 262 97-382 5-282 (283)
38 PTZ00263 protein kinase A cata 100.0 6.7E-44 1.4E-48 347.9 20.0 245 97-378 18-270 (329)
39 cd05571 STKc_PKB Catalytic dom 100.0 8.4E-44 1.8E-48 346.3 20.5 242 103-378 1-250 (323)
40 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.6E-43 3.4E-48 352.8 22.7 267 96-385 36-399 (400)
41 cd05612 STKc_PRKX_like Catalyt 100.0 4.7E-44 1E-48 342.9 18.2 245 97-378 1-253 (291)
42 KOG0589 Serine/threonine prote 100.0 1.9E-44 4.2E-49 348.0 15.2 253 97-379 4-258 (426)
43 cd05094 PTKc_TrkC Catalytic do 100.0 5.1E-43 1.1E-47 335.6 24.6 266 97-386 5-285 (291)
44 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.6E-43 3.5E-48 345.8 21.5 254 97-379 1-257 (333)
45 KOG0658 Glycogen synthase kina 100.0 3.1E-44 6.8E-49 332.4 15.1 274 97-386 24-315 (364)
46 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-43 6.2E-48 343.7 22.8 264 96-379 4-301 (331)
47 cd05054 PTKc_VEGFR Catalytic d 100.0 1.9E-43 4.2E-48 345.6 21.7 267 97-385 7-335 (337)
48 cd05108 PTKc_EGFR Catalytic do 100.0 7.4E-43 1.6E-47 338.6 25.2 264 97-387 7-272 (316)
49 cd07848 STKc_CDKL5 Catalytic d 100.0 2.4E-43 5.3E-48 336.9 21.0 267 97-378 1-283 (287)
50 KOG0663 Protein kinase PITSLRE 100.0 1.3E-43 2.7E-48 323.3 17.6 269 96-378 75-360 (419)
51 KOG4721 Serine/threonine prote 100.0 1.8E-44 3.8E-49 347.9 12.6 241 101-383 128-368 (904)
52 KOG1989 ARK protein kinase fam 100.0 1.8E-43 3.8E-48 359.9 20.3 265 96-386 36-314 (738)
53 KOG0611 Predicted serine/threo 100.0 2.4E-44 5.2E-49 334.9 12.8 248 96-379 52-303 (668)
54 cd05093 PTKc_TrkB Catalytic do 100.0 1E-42 2.2E-47 333.1 24.4 266 97-386 5-282 (288)
55 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.6E-43 1.9E-47 329.7 23.5 259 97-383 5-265 (266)
56 cd05049 PTKc_Trk Catalytic dom 100.0 5.3E-43 1.2E-47 333.2 22.0 261 97-381 5-279 (280)
57 KOG0194 Protein tyrosine kinas 100.0 1.2E-43 2.5E-48 348.8 17.0 265 97-388 157-425 (474)
58 cd05585 STKc_YPK1_like Catalyt 100.0 3.4E-43 7.4E-48 340.3 19.7 240 105-378 1-246 (312)
59 cd05045 PTKc_RET Catalytic dom 100.0 1.7E-42 3.7E-47 331.7 24.4 264 98-385 1-288 (290)
60 PTZ00426 cAMP-dependent protei 100.0 3.8E-43 8.2E-48 343.8 20.2 247 97-379 30-284 (340)
61 cd05593 STKc_PKB_gamma Catalyt 100.0 5.1E-43 1.1E-47 341.4 21.0 243 103-379 1-251 (328)
62 PTZ00267 NIMA-related protein 100.0 9.4E-43 2E-47 355.9 23.3 253 98-378 68-322 (478)
63 cd05052 PTKc_Abl Catalytic dom 100.0 1.7E-42 3.6E-47 327.0 23.2 256 97-383 6-262 (263)
64 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.3E-43 1.6E-47 334.2 21.0 266 97-378 5-284 (288)
65 cd05595 STKc_PKB_beta Catalyti 100.0 5.3E-43 1.1E-47 340.6 19.9 242 103-378 1-250 (323)
66 cd05111 PTK_HER3 Pseudokinase 100.0 3E-42 6.5E-47 328.3 24.3 263 97-386 7-271 (279)
67 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-42 3.7E-47 329.5 22.3 263 95-381 4-276 (277)
68 KOG1095 Protein tyrosine kinas 100.0 3.5E-43 7.5E-48 368.2 19.1 267 97-387 692-965 (1025)
69 PF07714 Pkinase_Tyr: Protein 100.0 6E-43 1.3E-47 329.6 18.9 255 101-380 3-259 (259)
70 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-42 4.1E-47 331.8 22.7 266 95-384 10-292 (293)
71 cd05055 PTKc_PDGFR Catalytic d 100.0 1.9E-42 4E-47 333.7 22.7 265 96-383 34-301 (302)
72 cd05628 STKc_NDR1 Catalytic do 100.0 2.5E-42 5.4E-47 341.3 23.6 254 97-379 1-293 (363)
73 cd05626 STKc_LATS2 Catalytic d 100.0 1.7E-42 3.7E-47 344.7 22.5 252 98-378 2-304 (381)
74 cd05072 PTKc_Lyn Catalytic dom 100.0 2.7E-42 5.9E-47 325.0 22.3 254 97-382 6-260 (261)
75 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.7E-42 3.7E-47 338.9 21.6 270 98-378 1-289 (338)
76 cd05599 STKc_NDR_like Catalyti 100.0 8.9E-43 1.9E-47 344.7 19.7 252 97-378 1-295 (364)
77 cd05601 STKc_CRIK Catalytic do 100.0 8.2E-43 1.8E-47 340.3 19.2 253 97-378 1-262 (330)
78 cd07862 STKc_CDK6 Catalytic do 100.0 3.4E-42 7.4E-47 329.5 22.9 271 97-378 1-286 (290)
79 cd05033 PTKc_EphR Catalytic do 100.0 6.1E-42 1.3E-46 323.6 24.3 261 97-384 4-266 (266)
80 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-42 3.4E-47 326.5 20.2 256 95-382 4-260 (261)
81 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-42 4.8E-47 337.7 21.9 266 96-378 4-298 (333)
82 cd05090 PTKc_Ror1 Catalytic do 100.0 4.4E-42 9.6E-47 327.7 23.4 261 97-382 5-282 (283)
83 cd05594 STKc_PKB_alpha Catalyt 100.0 7.8E-43 1.7E-47 339.8 18.4 243 103-379 1-252 (325)
84 cd05091 PTKc_Ror2 Catalytic do 100.0 3.1E-42 6.8E-47 328.6 22.0 262 97-382 5-282 (283)
85 PTZ00283 serine/threonine prot 100.0 1.9E-42 4.2E-47 354.1 21.9 261 94-379 29-297 (496)
86 cd05589 STKc_PKN Catalytic dom 100.0 2.1E-42 4.5E-47 336.6 21.1 245 99-378 1-256 (324)
87 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.6E-42 5.6E-47 344.0 22.2 266 96-384 36-400 (401)
88 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.2E-42 1.6E-46 326.2 24.3 275 99-384 6-282 (283)
89 PTZ00284 protein kinase; Provi 100.0 1E-41 2.2E-46 347.8 26.7 274 90-382 122-443 (467)
90 cd05092 PTKc_TrkA Catalytic do 100.0 6E-42 1.3E-46 326.4 23.2 261 97-381 5-279 (280)
91 PLN00034 mitogen-activated pro 100.0 5.5E-42 1.2E-46 337.6 23.6 249 97-379 74-328 (353)
92 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-42 2.5E-47 341.9 18.5 253 97-379 1-285 (350)
93 cd05032 PTKc_InsR_like Catalyt 100.0 5.1E-42 1.1E-46 325.9 22.2 262 96-381 5-276 (277)
94 cd05109 PTKc_HER2 Catalytic do 100.0 9.9E-42 2.1E-46 324.6 24.2 263 96-385 6-270 (279)
95 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.6E-42 7.8E-47 337.6 21.8 268 97-386 7-342 (343)
96 cd05625 STKc_LATS1 Catalytic d 100.0 2.7E-42 5.9E-47 343.5 21.0 251 98-378 2-304 (382)
97 cd05587 STKc_cPKC Catalytic do 100.0 3.6E-42 7.9E-47 334.9 21.3 242 98-373 1-246 (324)
98 cd05592 STKc_nPKC_theta_delta 100.0 3.4E-42 7.4E-47 333.9 20.8 242 103-378 1-247 (316)
99 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-41 2.4E-46 325.9 24.0 267 95-385 4-280 (288)
100 cd05629 STKc_NDR_like_fungal C 100.0 3.2E-42 6.9E-47 342.4 21.0 253 97-379 1-305 (377)
101 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.2E-42 1.3E-46 330.1 22.3 267 96-378 4-287 (303)
102 cd05075 PTKc_Axl Catalytic dom 100.0 9.7E-42 2.1E-46 323.1 23.2 262 99-383 1-271 (272)
103 cd05068 PTKc_Frk_like Catalyti 100.0 8.6E-42 1.9E-46 321.7 22.7 255 96-382 5-260 (261)
104 KOG0594 Protein kinase PCTAIRE 100.0 2.5E-42 5.5E-47 320.1 18.5 271 97-379 11-302 (323)
105 cd05605 STKc_GRK4_like Catalyt 100.0 6.6E-42 1.4E-46 327.1 22.1 251 98-378 1-260 (285)
106 KOG0032 Ca2+/calmodulin-depend 100.0 6.4E-42 1.4E-46 334.7 22.3 253 95-379 33-293 (382)
107 cd05584 STKc_p70S6K Catalytic 100.0 4.2E-42 9.2E-47 334.3 21.0 245 103-378 2-255 (323)
108 cd05598 STKc_LATS Catalytic do 100.0 1.9E-42 4E-47 343.9 18.5 253 97-379 1-301 (376)
109 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-41 2.3E-46 319.3 22.4 248 104-381 2-251 (252)
110 cd05089 PTKc_Tie1 Catalytic do 100.0 1.3E-41 2.8E-46 326.9 23.6 263 97-389 2-281 (297)
111 cd05616 STKc_cPKC_beta Catalyt 100.0 4.9E-42 1.1E-46 333.9 20.7 242 98-373 1-246 (323)
112 PHA03212 serine/threonine kina 100.0 6.1E-42 1.3E-46 341.0 21.8 260 97-378 92-375 (391)
113 cd05590 STKc_nPKC_eta Catalyti 100.0 3.9E-42 8.4E-47 334.1 19.9 237 103-373 1-241 (320)
114 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.6E-41 3.5E-46 322.8 23.7 262 96-381 5-276 (277)
115 cd05591 STKc_nPKC_epsilon Cata 100.0 4.5E-42 9.8E-47 333.8 20.3 242 103-378 1-253 (321)
116 PTZ00036 glycogen synthase kin 100.0 5.7E-42 1.2E-46 346.4 21.7 274 96-385 65-359 (440)
117 cd05588 STKc_aPKC Catalytic do 100.0 4.2E-42 9.1E-47 335.2 20.1 249 103-378 1-261 (329)
118 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.4E-41 3E-46 319.4 22.7 251 97-380 4-255 (256)
119 cd05035 PTKc_Axl_like Catalyti 100.0 2E-41 4.3E-46 320.8 24.0 263 99-383 1-272 (273)
120 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-41 3E-46 328.3 23.2 268 96-387 17-303 (307)
121 cd05071 PTKc_Src Catalytic dom 100.0 2E-41 4.4E-46 319.6 23.6 255 97-384 6-261 (262)
122 cd05619 STKc_nPKC_theta Cataly 100.0 8E-42 1.7E-46 331.3 21.2 242 103-378 1-247 (316)
123 cd05621 STKc_ROCK2 Catalytic d 100.0 7.5E-42 1.6E-46 338.3 21.4 257 93-379 39-304 (370)
124 cd05614 STKc_MSK2_N N-terminal 100.0 7.7E-42 1.7E-46 333.7 21.0 254 98-378 1-266 (332)
125 cd05596 STKc_ROCK Catalytic do 100.0 4.7E-42 1E-46 340.0 19.7 255 95-379 41-304 (370)
126 cd05051 PTKc_DDR Catalytic dom 100.0 2.2E-41 4.8E-46 324.8 23.6 269 96-381 4-295 (296)
127 KOG2345 Serine/threonine prote 100.0 1.7E-42 3.6E-47 304.3 14.3 271 94-384 18-301 (302)
128 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.3E-41 5E-46 326.2 23.6 267 96-386 14-299 (304)
129 cd05620 STKc_nPKC_delta Cataly 100.0 7.2E-42 1.6E-46 331.6 20.1 241 103-377 1-246 (316)
130 cd05618 STKc_aPKC_iota Catalyt 100.0 7.6E-42 1.6E-46 333.3 20.1 244 103-373 1-250 (329)
131 cd05082 PTKc_Csk Catalytic dom 100.0 3.1E-41 6.7E-46 317.0 23.2 250 97-383 6-256 (256)
132 cd05088 PTKc_Tie2 Catalytic do 100.0 2.3E-41 4.9E-46 326.2 22.7 262 97-388 7-285 (303)
133 cd05570 STKc_PKC Catalytic dom 100.0 9E-42 1.9E-46 331.3 20.0 242 103-378 1-251 (318)
134 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.8E-41 4E-46 323.5 21.7 276 97-383 4-283 (284)
135 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.5E-41 7.7E-46 317.3 23.2 253 97-382 6-259 (260)
136 PHA03207 serine/threonine kina 100.0 4.2E-41 9E-46 335.9 25.0 267 95-379 90-375 (392)
137 cd05097 PTKc_DDR_like Catalyti 100.0 3.2E-41 6.9E-46 323.9 22.7 268 97-381 5-294 (295)
138 KOG0033 Ca2+/calmodulin-depend 100.0 1.8E-43 3.8E-48 309.7 6.3 255 95-378 9-266 (355)
139 cd05575 STKc_SGK Catalytic dom 100.0 8.4E-42 1.8E-46 332.2 18.9 238 103-374 1-242 (323)
140 cd05043 PTK_Ryk Pseudokinase d 100.0 6.2E-41 1.3E-45 319.1 24.4 267 96-386 5-279 (280)
141 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.6E-41 7.8E-46 316.8 22.4 252 97-381 4-256 (256)
142 cd05608 STKc_GRK1 Catalytic do 100.0 2.2E-41 4.7E-46 322.6 21.2 245 105-378 1-256 (280)
143 cd08529 STKc_FA2-like Catalyti 100.0 4.6E-41 9.9E-46 315.3 23.0 250 98-378 1-252 (256)
144 cd05059 PTKc_Tec_like Catalyti 100.0 4E-41 8.6E-46 316.4 22.3 251 97-380 4-255 (256)
145 cd05099 PTKc_FGFR4 Catalytic d 100.0 8E-41 1.7E-45 324.0 25.0 267 96-386 11-296 (314)
146 KOG0599 Phosphorylase kinase g 100.0 4.5E-42 9.7E-47 305.2 14.6 260 93-385 13-291 (411)
147 cd05116 PTKc_Syk Catalytic dom 100.0 6.5E-41 1.4E-45 315.1 23.4 249 104-382 2-254 (257)
148 cd08228 STKc_Nek6 Catalytic do 100.0 7.2E-41 1.6E-45 316.2 23.7 259 97-383 2-265 (267)
149 cd05607 STKc_GRK7 Catalytic do 100.0 4.1E-41 8.8E-46 320.2 22.1 245 105-378 1-249 (277)
150 cd07876 STKc_JNK2 Catalytic do 100.0 7.5E-41 1.6E-45 330.3 24.8 268 95-378 19-314 (359)
151 cd05065 PTKc_EphR_B Catalytic 100.0 6.9E-41 1.5E-45 316.9 23.5 260 97-383 4-268 (269)
152 cd05039 PTKc_Csk_like Catalyti 100.0 5.8E-41 1.2E-45 315.0 22.7 250 96-382 5-255 (256)
153 cd05615 STKc_cPKC_alpha Cataly 100.0 2.6E-41 5.7E-46 328.7 21.1 242 98-373 1-246 (323)
154 cd07863 STKc_CDK4 Catalytic do 100.0 5.8E-41 1.3E-45 320.6 23.1 269 98-378 1-284 (288)
155 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.9E-41 1.7E-45 316.3 23.7 262 96-384 4-268 (268)
156 cd05617 STKc_aPKC_zeta Catalyt 100.0 2E-41 4.4E-46 330.1 20.0 244 103-373 1-248 (327)
157 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.6E-41 1.4E-45 315.5 22.8 254 96-382 5-259 (260)
158 cd05622 STKc_ROCK1 Catalytic d 100.0 2.7E-41 5.8E-46 334.6 21.0 260 90-379 36-304 (371)
159 cd05110 PTKc_HER4 Catalytic do 100.0 8.1E-41 1.8E-45 322.3 23.8 264 97-387 7-272 (303)
160 PHA03209 serine/threonine kina 100.0 1.1E-40 2.4E-45 328.8 25.2 261 95-378 64-350 (357)
161 cd05066 PTKc_EphR_A Catalytic 100.0 9.3E-41 2E-45 315.8 23.5 260 97-383 4-266 (267)
162 cd05602 STKc_SGK1 Catalytic do 100.0 1.8E-41 3.9E-46 330.2 19.0 241 103-377 1-245 (325)
163 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-40 2.6E-45 313.8 24.0 253 97-382 6-259 (260)
164 cd06637 STKc_TNIK Catalytic do 100.0 3E-41 6.5E-46 319.7 19.8 257 95-378 4-268 (272)
165 cd05627 STKc_NDR2 Catalytic do 100.0 1.8E-41 4E-46 334.8 19.1 252 97-378 1-292 (360)
166 cd05630 STKc_GRK6 Catalytic do 100.0 5.7E-41 1.2E-45 320.6 21.9 252 98-378 1-260 (285)
167 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-41 3.1E-46 330.9 18.0 240 103-376 1-244 (325)
168 cd06625 STKc_MEKK3_like Cataly 100.0 6.7E-41 1.4E-45 315.6 22.0 253 97-379 2-260 (263)
169 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-40 2.7E-45 313.3 23.7 250 105-383 3-255 (257)
170 cd05582 STKc_RSK_N N-terminal 100.0 1.1E-41 2.4E-46 330.6 17.0 242 103-375 2-245 (318)
171 cd08219 STKc_Nek3 Catalytic do 100.0 7.8E-41 1.7E-45 313.9 22.2 251 98-379 1-252 (255)
172 cd06615 PKc_MEK Catalytic doma 100.0 1E-40 2.2E-45 322.4 23.4 266 97-379 1-287 (308)
173 cd07874 STKc_JNK3 Catalytic do 100.0 5.1E-41 1.1E-45 331.0 21.6 274 94-383 14-317 (355)
174 cd05095 PTKc_DDR2 Catalytic do 100.0 1.3E-40 2.8E-45 319.8 23.8 268 97-381 5-295 (296)
175 cd06646 STKc_MAP4K5 Catalytic 100.0 4.6E-41 9.9E-46 317.7 20.3 255 96-379 8-265 (267)
176 PHA03211 serine/threonine kina 100.0 1.3E-40 2.7E-45 336.2 24.6 264 96-379 168-455 (461)
177 KOG4717 Serine/threonine prote 100.0 1.1E-41 2.5E-46 325.2 15.9 252 98-383 19-276 (864)
178 cd08229 STKc_Nek7 Catalytic do 100.0 9.1E-41 2E-45 315.5 21.9 260 97-384 2-266 (267)
179 cd05050 PTKc_Musk Catalytic do 100.0 1E-40 2.2E-45 319.1 22.5 262 96-381 4-287 (288)
180 cd05046 PTK_CCK4 Pseudokinase 100.0 7.2E-41 1.6E-45 317.8 21.2 261 97-381 5-274 (275)
181 cd05057 PTKc_EGFR_like Catalyt 100.0 2.2E-40 4.7E-45 315.3 24.5 262 97-385 7-270 (279)
182 PRK13184 pknD serine/threonine 100.0 8E-41 1.7E-45 352.6 23.6 264 97-387 2-294 (932)
183 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-40 2.6E-45 312.9 22.5 253 103-381 1-256 (257)
184 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-40 2.6E-45 329.5 23.5 273 95-383 22-324 (364)
185 cd05060 PTKc_Syk_like Catalyti 100.0 1.7E-40 3.6E-45 312.2 23.3 252 103-383 1-255 (257)
186 cd05632 STKc_GRK5 Catalytic do 100.0 1.1E-40 2.4E-45 318.6 22.3 251 99-378 2-260 (285)
187 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-40 2.8E-45 319.8 22.9 250 97-378 20-269 (296)
188 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-40 3E-45 314.0 22.6 245 104-381 2-262 (262)
189 cd05603 STKc_SGK2 Catalytic do 100.0 5.1E-41 1.1E-45 326.4 20.2 238 103-374 1-242 (321)
190 cd00192 PTKc Catalytic domain 100.0 1.8E-40 3.9E-45 311.6 23.0 253 103-381 1-262 (262)
191 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.6E-41 1.4E-45 323.8 20.4 266 97-378 6-285 (309)
192 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.5E-40 5.5E-45 312.2 23.7 260 97-384 2-266 (267)
193 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-40 2.5E-45 317.3 21.5 251 97-379 1-253 (279)
194 cd07853 STKc_NLK Catalytic dom 100.0 4.4E-41 9.5E-46 333.6 19.3 269 98-378 1-287 (372)
195 cd05058 PTKc_Met_Ron Catalytic 100.0 3.2E-40 6.9E-45 310.9 24.2 257 103-385 1-261 (262)
196 cd05056 PTKc_FAK Catalytic dom 100.0 2.6E-40 5.5E-45 313.2 23.6 261 97-386 6-268 (270)
197 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.1E-40 4.5E-45 323.9 23.7 267 97-387 12-297 (334)
198 KOG4279 Serine/threonine prote 100.0 5.4E-42 1.2E-46 337.0 12.5 244 104-378 582-831 (1226)
199 cd05034 PTKc_Src_like Catalyti 100.0 1.7E-40 3.8E-45 312.5 22.3 255 96-382 5-260 (261)
200 KOG0667 Dual-specificity tyros 100.0 6.9E-41 1.5E-45 331.2 20.3 266 98-382 187-507 (586)
201 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-40 2.4E-45 316.8 21.0 244 104-380 2-273 (274)
202 cd05597 STKc_DMPK_like Catalyt 100.0 1.5E-40 3.3E-45 324.5 22.2 256 97-379 1-266 (331)
203 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-40 3.7E-45 316.9 22.1 276 97-383 4-283 (284)
204 cd05047 PTKc_Tie Catalytic dom 100.0 2.9E-40 6.2E-45 313.0 23.4 251 104-384 2-269 (270)
205 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3E-40 6.5E-45 312.7 23.4 255 104-381 2-268 (269)
206 PF00069 Pkinase: Protein kina 100.0 6.9E-41 1.5E-45 314.6 18.3 252 99-378 1-256 (260)
207 PTZ00266 NIMA-related protein 100.0 8.5E-41 1.8E-45 353.8 21.0 258 94-378 10-294 (1021)
208 cd05623 STKc_MRCK_alpha Cataly 100.0 3.3E-40 7.2E-45 322.2 23.7 256 97-379 1-266 (332)
209 KOG4257 Focal adhesion tyrosin 100.0 6E-41 1.3E-45 326.5 18.0 261 97-385 389-651 (974)
210 KOG0983 Mitogen-activated prot 100.0 3.4E-41 7.5E-46 299.7 14.7 253 96-378 91-348 (391)
211 cd08223 STKc_Nek4 Catalytic do 100.0 4.3E-40 9.3E-45 309.0 23.1 251 98-378 1-253 (257)
212 cd05044 PTKc_c-ros Catalytic d 100.0 2.1E-40 4.6E-45 313.4 21.1 255 103-381 1-268 (269)
213 cd05041 PTKc_Fes_like Catalyti 100.0 6.9E-40 1.5E-44 306.7 24.2 248 103-381 1-250 (251)
214 cd06643 STKc_SLK Catalytic dom 100.0 2.9E-40 6.3E-45 315.0 22.0 250 99-378 7-261 (282)
215 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.2E-41 1.6E-45 315.0 17.5 245 104-381 2-258 (258)
216 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-41 2.8E-46 339.0 13.0 262 98-386 630-894 (996)
217 cd06645 STKc_MAP4K3 Catalytic 100.0 1.6E-40 3.4E-45 314.0 19.9 254 96-378 8-264 (267)
218 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.2E-40 4.7E-45 315.6 21.0 276 97-383 4-283 (284)
219 KOG0577 Serine/threonine prote 100.0 1.3E-41 2.7E-46 329.5 12.4 246 97-378 26-277 (948)
220 cd05624 STKc_MRCK_beta Catalyt 100.0 1.9E-40 4.1E-45 323.8 20.9 256 97-379 1-266 (331)
221 cd06655 STKc_PAK2 Catalytic do 100.0 3.2E-40 6.9E-45 317.2 22.0 250 97-378 19-268 (296)
222 cd05073 PTKc_Hck Catalytic dom 100.0 6.2E-40 1.3E-44 308.9 23.5 254 96-382 5-259 (260)
223 KOG0986 G protein-coupled rece 100.0 1.4E-41 3.1E-46 320.6 12.2 250 96-374 184-436 (591)
224 cd05042 PTKc_Aatyk Catalytic d 100.0 5E-40 1.1E-44 311.1 22.6 255 104-381 2-268 (269)
225 cd06644 STKc_STK10_LOK Catalyt 100.0 5.8E-40 1.3E-44 314.5 23.3 252 97-378 12-268 (292)
226 cd06611 STKc_SLK_like Catalyti 100.0 2.8E-40 6E-45 314.7 20.8 253 96-378 4-261 (280)
227 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.2E-40 1.6E-44 309.4 23.4 250 98-378 1-263 (267)
228 cd05083 PTKc_Chk Catalytic dom 100.0 3.7E-40 8.1E-45 309.3 21.2 247 97-382 6-253 (254)
229 cd06613 STKc_MAP4K3_like Catal 100.0 7.9E-40 1.7E-44 308.0 23.4 254 97-378 3-259 (262)
230 cd05085 PTKc_Fer Catalytic dom 100.0 7.9E-40 1.7E-44 306.1 23.2 246 104-381 2-249 (250)
231 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.4E-40 7.4E-45 314.4 20.8 264 88-378 7-278 (282)
232 cd06656 STKc_PAK3 Catalytic do 100.0 3.8E-40 8.2E-45 316.8 21.2 251 96-378 18-268 (297)
233 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-39 2.9E-44 315.7 25.2 201 102-313 6-219 (317)
234 cd05586 STKc_Sck1_like Catalyt 100.0 7.9E-41 1.7E-45 326.3 16.5 241 105-378 1-252 (330)
235 cd08221 STKc_Nek9 Catalytic do 100.0 8.7E-40 1.9E-44 306.9 22.7 251 98-379 1-253 (256)
236 cd06651 STKc_MEKK3 Catalytic d 100.0 1E-39 2.2E-44 308.6 23.2 253 97-378 2-260 (266)
237 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.3E-40 5.1E-45 324.8 19.6 268 94-378 12-297 (343)
238 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.2E-40 1.1E-44 316.4 21.4 266 97-378 6-285 (301)
239 cd07861 STKc_CDK1_euk Catalyti 100.0 8.8E-40 1.9E-44 311.8 22.7 266 98-378 1-281 (285)
240 cd06624 STKc_ASK Catalytic dom 100.0 8.2E-40 1.8E-44 309.4 22.3 256 93-378 4-264 (268)
241 cd08227 PK_STRAD_alpha Pseudok 100.0 7.5E-40 1.6E-44 319.1 22.5 264 101-378 2-306 (327)
242 cd06612 STKc_MST1_2 Catalytic 100.0 6.8E-40 1.5E-44 307.3 21.3 250 97-378 3-252 (256)
243 cd06652 STKc_MEKK2 Catalytic d 100.0 1.3E-39 2.9E-44 307.5 23.4 253 97-378 2-260 (265)
244 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.9E-40 2.2E-44 306.8 22.4 244 103-381 1-259 (259)
245 cd06638 STKc_myosinIIIA Cataly 100.0 4.6E-40 9.9E-45 314.0 20.4 267 87-379 8-283 (286)
246 cd05574 STKc_phototropin_like 100.0 7.9E-40 1.7E-44 317.2 22.2 254 97-378 1-288 (316)
247 cd06609 STKc_MST3_like Catalyt 100.0 7.7E-40 1.7E-44 310.6 21.4 249 97-378 1-250 (274)
248 KOG1094 Discoidin domain recep 100.0 9.4E-40 2E-44 316.4 21.8 264 97-383 538-804 (807)
249 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.2E-39 4.7E-44 307.1 23.7 263 99-383 1-272 (273)
250 smart00219 TyrKc Tyrosine kina 100.0 1.7E-39 3.7E-44 304.7 22.6 256 99-380 1-258 (258)
251 KOG0574 STE20-like serine/thre 100.0 4.2E-42 9.2E-47 309.1 4.5 249 98-378 34-282 (502)
252 cd06640 STKc_MST4 Catalytic do 100.0 1.8E-39 4E-44 308.7 22.9 249 97-379 4-253 (277)
253 cd08217 STKc_Nek2 Catalytic do 100.0 2.1E-39 4.6E-44 305.0 23.0 253 98-379 1-262 (265)
254 KOG0690 Serine/threonine prote 100.0 3.1E-41 6.7E-46 306.4 9.8 250 95-378 166-423 (516)
255 KOG0584 Serine/threonine prote 100.0 4.1E-41 8.9E-46 330.0 11.4 243 103-378 46-295 (632)
256 cd06631 STKc_YSK4 Catalytic do 100.0 1.5E-39 3.3E-44 307.0 21.8 251 98-378 1-261 (265)
257 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.3E-39 9.3E-44 304.7 24.9 255 104-381 2-267 (268)
258 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-39 2.9E-44 310.8 21.5 257 97-380 5-267 (284)
259 KOG0579 Ste20-like serine/thre 100.0 2.8E-41 6E-46 329.1 9.9 252 97-378 32-288 (1187)
260 cd06639 STKc_myosinIIIB Cataly 100.0 1.9E-39 4E-44 310.8 22.4 266 87-378 12-286 (291)
261 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.4E-39 3E-44 310.8 21.4 253 97-378 1-261 (286)
262 cd05609 STKc_MAST Catalytic do 100.0 1.7E-39 3.7E-44 313.4 22.0 257 97-382 1-273 (305)
263 cd06658 STKc_PAK5 Catalytic do 100.0 6.3E-40 1.4E-44 314.5 18.9 250 98-379 23-272 (292)
264 cd08218 STKc_Nek1 Catalytic do 100.0 2.2E-39 4.8E-44 304.1 22.2 250 98-378 1-252 (256)
265 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.3E-40 1.4E-44 311.8 18.4 248 98-379 5-253 (277)
266 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-39 5.5E-44 303.5 22.3 249 98-378 1-252 (256)
267 cd06608 STKc_myosinIII_like Ca 100.0 3E-39 6.5E-44 305.9 22.9 258 95-378 4-271 (275)
268 cd07833 STKc_CDKL Catalytic do 100.0 1.4E-39 3.1E-44 310.7 20.8 267 97-378 1-284 (288)
269 cd07867 STKc_CDC2L6 Catalytic 100.0 3E-39 6.5E-44 313.1 23.4 200 103-313 7-219 (317)
270 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3E-39 6.4E-44 304.8 22.4 257 97-378 1-263 (267)
271 KOG4278 Protein tyrosine kinas 100.0 2.3E-40 5E-45 322.1 15.0 256 98-384 268-524 (1157)
272 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.6E-39 7.8E-44 305.6 23.0 255 98-378 2-268 (272)
273 cd06630 STKc_MEKK1 Catalytic d 100.0 3.4E-39 7.4E-44 304.8 22.4 254 98-378 1-263 (268)
274 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.8E-39 6E-44 308.4 21.9 266 97-378 1-282 (286)
275 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-39 2.5E-44 313.4 19.3 250 98-379 22-271 (297)
276 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.6E-39 1.9E-43 305.7 24.8 260 97-378 1-265 (287)
277 cd05580 STKc_PKA Catalytic dom 100.0 3.3E-39 7E-44 309.1 21.5 245 97-378 1-253 (290)
278 cd05112 PTKc_Itk Catalytic dom 100.0 4.1E-39 8.9E-44 302.3 21.8 251 97-380 4-255 (256)
279 KOG0604 MAP kinase-activated p 100.0 3.9E-40 8.5E-45 296.4 13.8 258 95-379 59-322 (400)
280 cd06623 PKc_MAPKK_plant_like C 100.0 7E-39 1.5E-43 301.7 22.9 252 97-378 1-255 (264)
281 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-39 2.6E-44 311.1 17.7 266 97-378 1-282 (286)
282 cd06632 STKc_MEKK1_plant Catal 100.0 4.9E-39 1.1E-43 301.7 21.4 248 98-378 1-254 (258)
283 PHA03210 serine/threonine kina 100.0 2.2E-39 4.7E-44 332.4 20.5 276 93-378 144-453 (501)
284 cd08528 STKc_Nek10 Catalytic d 100.0 4.4E-39 9.6E-44 304.5 20.5 255 98-381 1-268 (269)
285 cd07832 STKc_CCRK Catalytic do 100.0 1.5E-38 3.2E-43 303.3 24.3 266 98-378 1-281 (286)
286 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-38 3E-43 313.5 24.7 276 94-385 13-319 (353)
287 KOG0199 ACK and related non-re 100.0 6E-40 1.3E-44 323.2 14.7 253 100-379 113-368 (1039)
288 cd06648 STKc_PAK_II Catalytic 100.0 9.1E-39 2E-43 305.4 22.1 249 98-378 20-268 (285)
289 cd07839 STKc_CDK5 Catalytic do 100.0 3.2E-39 6.9E-44 307.9 18.9 263 98-378 1-280 (284)
290 cd06647 STKc_PAK_I Catalytic d 100.0 8E-39 1.7E-43 307.0 21.7 251 97-379 19-269 (293)
291 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-38 2.3E-43 305.5 22.4 265 97-378 5-287 (291)
292 PHA02882 putative serine/threo 100.0 1.3E-38 2.7E-43 305.8 22.9 264 96-380 11-293 (294)
293 cd07860 STKc_CDK2_3 Catalytic 100.0 4.8E-39 1E-43 306.7 19.5 266 98-378 1-280 (284)
294 cd06605 PKc_MAPKK Catalytic do 100.0 3.6E-39 7.7E-44 304.2 18.2 254 97-378 1-256 (265)
295 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-38 3.7E-43 302.1 22.9 248 98-379 5-253 (277)
296 KOG0596 Dual specificity; seri 100.0 1E-39 2.2E-44 314.8 14.6 253 95-378 359-626 (677)
297 KOG4250 TANK binding protein k 100.0 2E-39 4.2E-44 321.9 16.8 277 99-386 15-313 (732)
298 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.4E-38 3E-43 304.8 22.2 267 96-378 4-287 (291)
299 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-38 2.4E-43 303.9 21.1 252 97-378 1-260 (283)
300 cd06626 STKc_MEKK4 Catalytic d 100.0 2.8E-38 6.1E-43 297.8 23.3 253 98-378 1-260 (264)
301 cd07849 STKc_ERK1_2_like Catal 100.0 4.2E-39 9.2E-44 315.0 18.3 277 96-385 4-300 (336)
302 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-38 3.4E-43 304.7 21.6 268 97-378 5-289 (293)
303 cd07841 STKc_CDK7 Catalytic do 100.0 1.5E-38 3.2E-43 305.6 21.2 265 98-378 1-281 (298)
304 cd05122 PKc_STE Catalytic doma 100.0 4.3E-38 9.4E-43 293.5 23.7 250 98-378 1-250 (253)
305 cd05578 STKc_Yank1 Catalytic d 100.0 6.5E-39 1.4E-43 301.5 18.2 248 98-377 1-253 (258)
306 PLN00113 leucine-rich repeat r 100.0 4.1E-38 9E-43 348.5 27.6 264 96-386 689-954 (968)
307 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-38 2.6E-43 299.0 19.8 250 98-378 1-253 (257)
308 cd07855 STKc_ERK5 Catalytic do 100.0 1.2E-38 2.5E-43 311.6 20.4 272 96-378 4-293 (334)
309 cd06614 STKc_PAK Catalytic dom 100.0 3.2E-38 7E-43 301.5 22.5 253 95-378 17-269 (286)
310 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.8E-38 8.1E-43 297.5 22.7 253 97-378 2-260 (264)
311 KOG0612 Rho-associated, coiled 100.0 1.1E-39 2.3E-44 336.6 12.9 256 91-378 69-337 (1317)
312 cd06607 STKc_TAO Catalytic dom 100.0 4.6E-38 9.9E-43 303.7 23.6 247 97-379 15-267 (307)
313 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-40 3.3E-45 346.8 6.5 254 95-378 1233-1493(1509)
314 cd07852 STKc_MAPK15 Catalytic 100.0 4.1E-38 8.8E-43 308.1 23.0 275 95-383 5-301 (337)
315 KOG1035 eIF-2alpha kinase GCN2 100.0 2.8E-39 6E-44 336.0 15.5 260 94-378 476-870 (1351)
316 cd05633 STKc_GRK3 Catalytic do 100.0 3.5E-38 7.5E-43 300.4 21.7 242 104-378 1-254 (279)
317 cd06917 STKc_NAK1_like Catalyt 100.0 2.5E-38 5.5E-43 300.6 20.7 248 98-378 2-254 (277)
318 cd07836 STKc_Pho85 Catalytic d 100.0 5E-38 1.1E-42 299.5 22.8 266 98-378 1-280 (284)
319 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-38 4.4E-43 310.3 20.3 278 96-387 4-301 (337)
320 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-38 2.4E-43 304.8 18.0 254 98-378 5-266 (288)
321 cd05577 STKc_GRK Catalytic dom 100.0 2.8E-38 6.1E-43 300.5 20.6 245 105-378 1-253 (277)
322 KOG0586 Serine/threonine prote 100.0 4.6E-39 9.9E-44 315.3 15.4 246 96-378 55-305 (596)
323 cd07831 STKc_MOK Catalytic dom 100.0 6.1E-38 1.3E-42 298.5 22.8 263 99-378 1-278 (282)
324 cd07835 STKc_CDK1_like Catalyt 100.0 3.2E-38 7E-43 300.8 20.1 265 99-378 1-279 (283)
325 cd07837 STKc_CdkB_plant Cataly 100.0 6.3E-38 1.4E-42 300.6 22.2 269 97-378 1-290 (295)
326 cd07865 STKc_CDK9 Catalytic do 100.0 6.2E-38 1.4E-42 302.6 22.3 273 96-378 11-306 (310)
327 cd05572 STKc_cGK_PKG Catalytic 100.0 8E-38 1.7E-42 294.7 22.4 243 105-378 1-251 (262)
328 cd06606 STKc_MAPKKK Catalytic 100.0 6.8E-38 1.5E-42 293.3 21.8 254 98-378 1-256 (260)
329 cd07842 STKc_CDK8_like Catalyt 100.0 7.1E-38 1.5E-42 303.1 22.5 272 98-378 1-312 (316)
330 PLN00009 cyclin-dependent kina 100.0 4.9E-38 1.1E-42 301.4 21.1 267 97-378 2-283 (294)
331 KOG0696 Serine/threonine prote 100.0 3.4E-39 7.4E-44 301.2 12.5 242 97-372 349-594 (683)
332 cd07845 STKc_CDK10 Catalytic d 100.0 5.9E-38 1.3E-42 303.2 21.7 269 96-378 6-289 (309)
333 cd06657 STKc_PAK4 Catalytic do 100.0 4.8E-38 1E-42 301.4 20.8 244 103-378 26-269 (292)
334 cd08215 STKc_Nek Catalytic dom 100.0 8.5E-38 1.8E-42 292.8 22.0 250 98-378 1-254 (258)
335 cd06635 STKc_TAO1 Catalytic do 100.0 1.1E-37 2.5E-42 302.4 22.6 250 98-383 26-281 (317)
336 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-37 2.7E-42 303.6 22.8 268 104-385 5-316 (328)
337 cd06627 STKc_Cdc7_like Catalyt 100.0 1.7E-37 3.7E-42 290.4 22.4 248 98-378 1-250 (254)
338 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-37 2.7E-42 293.1 20.9 244 103-380 2-249 (260)
339 PHA03390 pk1 serine/threonine- 100.0 2.9E-37 6.4E-42 292.1 23.1 250 90-378 7-261 (267)
340 cd07864 STKc_CDK12 Catalytic d 100.0 1.9E-37 4E-42 298.4 22.0 273 94-378 4-298 (302)
341 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-37 2.9E-42 291.6 20.5 248 98-378 1-252 (256)
342 cd07840 STKc_CDK9_like Catalyt 100.0 1.1E-37 2.4E-42 297.2 19.8 267 99-378 1-283 (287)
343 cd05606 STKc_beta_ARK Catalyti 100.0 2.7E-37 5.9E-42 294.1 22.4 242 104-378 1-254 (278)
344 cd07834 STKc_MAPK Catalytic do 100.0 1.2E-37 2.7E-42 303.6 20.4 278 98-386 1-298 (330)
345 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-37 3.2E-42 300.1 20.7 273 96-378 7-307 (311)
346 cd05579 STKc_MAST_like Catalyt 100.0 8.1E-38 1.8E-42 294.3 18.4 247 105-381 1-256 (265)
347 KOG2052 Activin A type IB rece 100.0 4.2E-38 9.2E-43 297.0 16.2 268 94-385 208-505 (513)
348 KOG3653 Transforming growth fa 100.0 3.4E-38 7.4E-43 299.6 15.6 277 98-387 211-507 (534)
349 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-37 4E-42 304.1 21.4 272 96-385 14-305 (342)
350 cd05118 STKc_CMGC Catalytic do 100.0 1.8E-37 4E-42 295.2 20.3 264 99-378 1-279 (283)
351 cd07838 STKc_CDK4_6_like Catal 100.0 7.3E-37 1.6E-41 291.7 23.7 268 99-378 1-283 (287)
352 cd07857 STKc_MPK1 Catalytic do 100.0 4.5E-37 9.8E-42 300.1 22.7 272 98-378 1-291 (332)
353 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.7E-37 8.1E-42 300.2 22.1 269 91-379 4-288 (328)
354 cd07854 STKc_MAPK4_6 Catalytic 100.0 1E-37 2.2E-42 305.9 18.2 274 97-382 5-305 (342)
355 cd08216 PK_STRAD Pseudokinase 100.0 5E-37 1.1E-41 297.2 22.3 262 101-378 6-294 (314)
356 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.6E-37 1.2E-41 301.0 22.7 275 88-379 8-300 (345)
357 KOG0671 LAMMER dual specificit 100.0 4.2E-38 9E-43 292.3 13.5 267 93-378 85-405 (415)
358 cd05581 STKc_PDK1 Catalytic do 100.0 1.6E-37 3.4E-42 295.1 17.6 250 97-378 1-276 (280)
359 cd06634 STKc_TAO2 Catalytic do 100.0 4.3E-37 9.2E-42 297.1 20.9 247 97-379 15-267 (308)
360 KOG0587 Traf2- and Nck-interac 100.0 1.7E-37 3.8E-42 313.6 18.8 264 89-378 11-281 (953)
361 cd07830 STKc_MAK_like Catalyti 100.0 4.1E-37 8.8E-42 293.1 20.2 264 99-378 1-279 (283)
362 PTZ00024 cyclin-dependent prot 100.0 4.8E-37 1E-41 300.3 20.6 267 97-378 8-312 (335)
363 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.9E-37 1.3E-41 300.7 20.7 273 94-384 12-305 (343)
364 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-36 3E-41 294.2 23.1 245 99-379 23-273 (313)
365 cd05583 STKc_MSK_N N-terminal 100.0 6.9E-37 1.5E-41 292.6 20.2 258 98-382 1-266 (288)
366 cd06618 PKc_MKK7 Catalytic dom 100.0 6E-37 1.3E-41 294.3 19.6 253 97-379 15-273 (296)
367 cd08222 STKc_Nek11 Catalytic d 100.0 7E-37 1.5E-41 288.0 19.5 249 98-378 1-256 (260)
368 KOG1025 Epidermal growth facto 100.0 9.4E-38 2E-42 312.5 14.1 261 99-386 698-960 (1177)
369 KOG0607 MAP kinase-interacting 100.0 2.3E-37 5E-42 280.7 15.2 284 87-393 73-377 (463)
370 cd05613 STKc_MSK1_N N-terminal 100.0 1.5E-36 3.3E-41 290.5 21.2 254 98-378 1-267 (290)
371 KOG4236 Serine/threonine prote 100.0 9.3E-38 2E-42 299.2 11.2 245 102-378 569-818 (888)
372 KOG1151 Tousled-like protein k 100.0 1.7E-37 3.7E-42 292.1 12.2 259 97-378 463-740 (775)
373 KOG0662 Cyclin-dependent kinas 100.0 5.4E-37 1.2E-41 257.4 13.9 265 98-378 3-282 (292)
374 cd07851 STKc_p38 Catalytic dom 100.0 5.1E-37 1.1E-41 301.1 16.1 268 94-378 12-297 (343)
375 cd07829 STKc_CDK_like Catalyti 100.0 2.1E-36 4.6E-41 287.7 19.9 264 99-378 1-278 (282)
376 KOG1006 Mitogen-activated prot 100.0 8.9E-39 1.9E-43 283.3 3.3 265 82-379 56-327 (361)
377 KOG0666 Cyclin C-dependent kin 100.0 1.9E-37 4.2E-42 280.3 11.8 209 96-312 23-242 (438)
378 cd05610 STKc_MASTL Catalytic d 100.0 3.1E-36 6.8E-41 318.5 22.4 146 97-256 4-152 (669)
379 cd05123 STKc_AGC Catalytic dom 100.0 4.2E-36 9E-41 280.6 18.8 237 105-375 1-240 (250)
380 KOG0200 Fibroblast/platelet-de 100.0 5.6E-36 1.2E-40 312.2 20.6 266 96-385 295-581 (609)
381 KOG0603 Ribosomal protein S6 k 100.0 2.4E-36 5.2E-41 297.7 14.7 242 95-379 320-563 (612)
382 KOG0669 Cyclin T-dependent kin 100.0 1.5E-37 3.2E-42 273.6 4.8 273 97-379 17-315 (376)
383 KOG0614 cGMP-dependent protein 100.0 2.6E-37 5.7E-42 295.1 6.2 243 97-372 420-665 (732)
384 cd05576 STKc_RPK118_like Catal 100.0 1.3E-35 2.8E-40 275.9 16.6 222 108-375 4-225 (237)
385 KOG1024 Receptor-like protein 100.0 1.4E-35 3E-40 275.5 16.4 274 90-386 277-558 (563)
386 KOG0695 Serine/threonine prote 100.0 3.1E-36 6.6E-41 274.9 11.2 250 96-372 249-503 (593)
387 KOG0608 Warts/lats-like serine 100.0 1.6E-35 3.4E-40 289.2 15.0 244 98-371 630-917 (1034)
388 PLN03225 Serine/threonine-prot 100.0 2.1E-34 4.6E-39 297.7 20.5 271 95-378 130-449 (566)
389 PLN03224 probable serine/threo 100.0 1.1E-33 2.3E-38 285.9 21.6 274 95-378 143-499 (507)
390 smart00220 S_TKc Serine/Threon 100.0 1.8E-33 3.9E-38 260.3 18.7 239 109-378 1-240 (244)
391 KOG1290 Serine/threonine prote 100.0 4.9E-33 1.1E-37 265.2 19.9 138 96-242 77-222 (590)
392 KOG0668 Casein kinase II, alph 100.0 6E-34 1.3E-38 247.6 11.5 262 96-378 37-321 (338)
393 KOG0984 Mitogen-activated prot 100.0 8.7E-34 1.9E-38 243.1 9.9 202 97-313 46-255 (282)
394 KOG1027 Serine/threonine prote 100.0 1.4E-33 3E-38 284.2 9.0 245 99-378 511-766 (903)
395 KOG0664 Nemo-like MAPK-related 100.0 2.6E-34 5.6E-39 255.8 3.3 272 97-380 53-344 (449)
396 KOG0576 Mitogen-activated prot 100.0 2.7E-33 5.9E-38 275.5 6.4 254 96-378 14-270 (829)
397 KOG1152 Signal transduction se 100.0 5.3E-32 1.2E-36 262.5 8.5 197 97-311 561-770 (772)
398 cd00180 PKc Catalytic domain o 100.0 5.2E-30 1.1E-34 231.3 20.5 211 105-379 1-214 (215)
399 KOG0665 Jun-N-terminal kinase 100.0 4E-31 8.6E-36 240.6 10.8 266 96-378 16-309 (369)
400 KOG0670 U4/U6-associated splic 100.0 2.3E-31 5.1E-36 255.1 9.8 269 92-378 427-745 (752)
401 smart00221 STYKc Protein kinas 100.0 2.2E-29 4.9E-34 230.7 19.3 199 99-312 1-202 (225)
402 KOG1345 Serine/threonine kinas 100.0 3.5E-30 7.6E-35 229.4 10.7 251 95-378 22-283 (378)
403 KOG1167 Serine/threonine prote 100.0 8.9E-30 1.9E-34 239.9 11.6 270 93-378 32-380 (418)
404 PLN00181 protein SPA1-RELATED; 100.0 3.8E-29 8.3E-34 270.5 9.2 200 155-378 28-264 (793)
405 smart00750 KIND kinase non-cat 100.0 2.9E-27 6.3E-32 209.2 16.5 169 188-385 1-171 (176)
406 KOG1164 Casein kinase (serine/ 99.9 1.3E-26 2.9E-31 224.9 21.3 264 98-387 19-301 (322)
407 KOG1165 Casein kinase (serine/ 99.9 3.3E-26 7.2E-31 209.4 19.2 265 97-387 28-303 (449)
408 PRK09188 serine/threonine prot 99.9 5.2E-26 1.1E-30 220.9 14.8 171 92-285 13-195 (365)
409 KOG1163 Casein kinase (serine/ 99.9 9.7E-26 2.1E-30 198.0 13.3 264 95-384 13-285 (341)
410 COG0515 SPS1 Serine/threonine 99.9 6E-24 1.3E-28 204.4 23.9 260 99-379 2-275 (384)
411 KOG0590 Checkpoint kinase and 99.9 3.2E-26 6.9E-31 236.4 7.2 258 100-378 321-584 (601)
412 KOG0195 Integrin-linked kinase 99.9 1.4E-25 3.1E-30 200.1 7.0 246 104-384 197-447 (448)
413 PRK10359 lipopolysaccharide co 99.9 1.4E-23 3.1E-28 190.1 11.0 176 94-304 28-216 (232)
414 KOG1033 eIF-2alpha kinase PEK/ 99.9 4.1E-24 8.9E-29 207.6 3.2 171 178-374 331-507 (516)
415 cd05147 RIO1_euk RIO kinase fa 99.9 9.5E-23 2.1E-27 182.2 11.2 139 102-258 2-167 (190)
416 KOG0603 Ribosomal protein S6 k 99.9 1.1E-23 2.5E-28 208.3 3.8 229 104-373 1-232 (612)
417 KOG1240 Protein kinase contain 99.9 2.7E-23 5.8E-28 215.3 6.5 247 98-379 24-291 (1431)
418 PRK10345 hypothetical protein; 99.9 1.3E-21 2.9E-26 176.6 15.2 140 100-255 5-156 (210)
419 cd05145 RIO1_like RIO kinase f 99.9 9.9E-22 2.1E-26 176.1 14.2 140 102-259 2-168 (190)
420 PRK12274 serine/threonine prot 99.9 1.7E-21 3.6E-26 173.0 13.3 187 100-313 5-210 (218)
421 KOG4158 BRPK/PTEN-induced prot 99.9 7E-22 1.5E-26 185.1 10.6 261 97-380 157-511 (598)
422 PF14531 Kinase-like: Kinase-l 99.9 5.4E-21 1.2E-25 178.4 14.0 237 98-370 13-288 (288)
423 KOG1166 Mitotic checkpoint ser 99.8 9.7E-21 2.1E-25 199.8 15.0 252 95-387 696-957 (974)
424 KOG1023 Natriuretic peptide re 99.8 1.1E-20 2.4E-25 187.1 13.7 219 153-386 1-227 (484)
425 KOG0606 Microtubule-associated 99.8 2E-21 4.3E-26 201.4 8.3 216 97-378 83-311 (1205)
426 smart00090 RIO RIO-like kinase 99.8 2.3E-19 4.9E-24 165.9 12.3 142 98-258 29-198 (237)
427 PRK14879 serine/threonine prot 99.8 6.1E-19 1.3E-23 160.7 14.0 134 103-257 2-143 (211)
428 PRK09605 bifunctional UGMP fam 99.8 6.1E-19 1.3E-23 182.7 13.5 139 94-257 330-476 (535)
429 TIGR03724 arch_bud32 Kae1-asso 99.8 1.3E-18 2.8E-23 157.1 13.0 130 104-257 1-138 (199)
430 cd05144 RIO2_C RIO kinase fami 99.8 6.5E-18 1.4E-22 152.5 12.1 143 91-258 9-175 (198)
431 PRK01723 3-deoxy-D-manno-octul 99.7 4.9E-17 1.1E-21 150.6 14.3 139 102-257 36-191 (239)
432 KOG0590 Checkpoint kinase and 99.7 1E-18 2.2E-23 180.8 0.2 257 98-378 21-285 (601)
433 cd05120 APH_ChoK_like Aminogly 99.7 2E-16 4.2E-21 135.3 12.9 136 101-258 2-139 (155)
434 cd05119 RIO RIO kinase family, 99.7 2.4E-16 5.1E-21 140.8 11.0 135 102-258 2-164 (187)
435 KOG1266 Protein kinase [Signal 99.6 4.3E-15 9.2E-20 136.8 6.5 206 151-378 119-330 (458)
436 KOG0601 Cyclin-dependent kinas 99.5 2.4E-14 5.3E-19 142.3 7.7 250 97-378 114-378 (524)
437 TIGR01982 UbiB 2-polyprenylphe 99.5 1.2E-13 2.6E-18 138.9 11.3 141 103-259 123-308 (437)
438 cd05151 ChoK Choline Kinase (C 99.4 4.9E-13 1.1E-17 117.2 9.9 131 102-257 3-136 (170)
439 PRK04750 ubiB putative ubiquin 99.4 2.3E-12 5.1E-17 131.2 11.2 145 97-260 120-316 (537)
440 cd05146 RIO3_euk RIO kinase fa 99.3 1.1E-11 2.5E-16 110.1 12.2 141 103-258 3-174 (197)
441 KOG1243 Protein kinase [Genera 99.3 2.6E-11 5.6E-16 122.2 15.8 160 130-306 40-199 (690)
442 KOG0606 Microtubule-associated 99.3 3E-13 6.5E-18 141.3 1.8 248 97-374 804-1084(1205)
443 KOG0601 Cyclin-dependent kinas 99.3 1.6E-12 3.5E-17 129.5 5.2 247 96-381 264-516 (524)
444 KOG3087 Serine/threonine prote 99.3 5.6E-11 1.2E-15 101.8 12.4 143 101-257 11-165 (229)
445 COG3642 Mn2+-dependent serine/ 99.3 6E-11 1.3E-15 102.1 12.4 130 104-257 3-140 (204)
446 cd05154 ACAD10_11_like Acyl-Co 99.2 2.1E-10 4.6E-15 104.9 13.1 146 103-258 4-207 (223)
447 KOG3741 Poly(A) ribonuclease s 99.2 9.4E-10 2E-14 107.8 17.5 218 110-379 289-521 (655)
448 COG4248 Uncharacterized protei 99.1 8.7E-09 1.9E-13 98.8 18.6 267 100-387 14-304 (637)
449 PRK15123 lipopolysaccharide co 99.1 1.9E-09 4.1E-14 101.2 14.1 110 145-257 74-194 (268)
450 PF06293 Kdo: Lipopolysacchari 99.0 9E-09 2E-13 93.3 14.3 109 144-257 56-170 (206)
451 PF01163 RIO1: RIO1 family; I 99.0 4.6E-09 9.9E-14 93.1 10.8 96 146-257 55-155 (188)
452 PRK09902 hypothetical protein; 98.9 3.3E-08 7.2E-13 88.2 14.1 143 105-257 26-179 (216)
453 KOG2137 Protein kinase [Signal 98.8 8.2E-10 1.8E-14 111.9 1.3 150 213-378 107-264 (700)
454 COG0478 RIO-like serine/threon 98.8 3.6E-08 7.9E-13 90.1 11.1 136 98-257 92-251 (304)
455 COG1718 RIO1 Serine/threonine 98.5 1.4E-06 3.1E-11 79.0 12.3 154 86-259 34-217 (268)
456 KOG0576 Mitogen-activated prot 98.5 1.2E-08 2.6E-13 102.5 -2.1 190 95-311 240-431 (829)
457 PF01636 APH: Phosphotransfera 98.5 1.6E-06 3.5E-11 79.6 11.7 145 102-256 2-196 (239)
458 COG0661 AarF Predicted unusual 98.5 8.8E-07 1.9E-11 90.1 10.5 143 103-260 131-317 (517)
459 PF06176 WaaY: Lipopolysacchar 98.4 3.8E-06 8.2E-11 75.5 13.0 143 94-257 28-183 (229)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 5.6E-06 1.2E-10 76.1 13.1 139 103-257 7-182 (226)
461 PF12260 PIP49_C: Protein-kina 98.3 1.4E-05 2.9E-10 71.2 14.1 100 148-257 8-111 (188)
462 cd05150 APH Aminoglycoside 3'- 98.3 1.1E-05 2.5E-10 75.0 13.2 139 105-257 6-193 (244)
463 PF13095 FTA2: Kinetochore Sim 98.3 1.5E-05 3.3E-10 70.7 13.0 139 82-255 27-206 (207)
464 KOG1235 Predicted unusual prot 98.2 6.2E-06 1.3E-10 83.8 10.5 143 103-260 167-357 (538)
465 COG2112 Predicted Ser/Thr prot 98.2 1E-05 2.2E-10 69.6 9.4 130 100-257 25-155 (201)
466 PLN02876 acyl-CoA dehydrogenas 98.2 2.7E-05 5.9E-10 85.1 14.7 155 102-260 43-260 (822)
467 PF10707 YrbL-PhoP_reg: PhoP r 98.1 5.8E-05 1.2E-09 67.5 12.7 133 102-256 6-171 (199)
468 KOG1035 eIF-2alpha kinase GCN2 98.1 6.5E-06 1.4E-10 88.6 7.0 197 148-379 231-434 (1351)
469 cd05155 APH_ChoK_like_1 Unchar 98.0 9.4E-05 2E-09 68.4 11.6 31 227-257 164-194 (235)
470 PRK10593 hypothetical protein; 97.9 0.00022 4.9E-09 68.3 13.9 80 101-190 18-100 (297)
471 TIGR02721 ycfN_thiK thiamine k 97.8 0.00013 2.9E-09 68.3 10.5 137 105-257 4-175 (256)
472 cd05157 ETNK_euk Ethanolamine 97.8 0.00032 7E-09 64.7 12.0 31 227-257 170-201 (235)
473 cd05153 HomoserineK_II Homoser 97.8 0.00022 4.8E-09 68.3 11.1 146 102-257 19-205 (296)
474 PRK09550 mtnK methylthioribose 97.6 0.0016 3.4E-08 64.7 14.8 76 103-189 32-117 (401)
475 PRK05231 homoserine kinase; Pr 97.6 0.0023 5E-08 62.0 15.3 32 226-257 186-217 (319)
476 KOG1826 Ras GTPase activating 97.6 9.8E-06 2.1E-10 89.1 -1.7 177 130-310 1255-1440(2724)
477 TIGR00938 thrB_alt homoserine 97.4 0.0032 6.9E-08 60.7 13.4 147 102-257 27-217 (307)
478 cd05156 ChoK_euk Choline Kinas 97.3 0.0017 3.7E-08 62.4 11.0 32 226-257 178-213 (302)
479 KOG2268 Serine/threonine prote 97.2 0.00036 7.7E-09 65.9 4.3 145 87-256 79-250 (465)
480 PLN02236 choline kinase 97.0 0.0086 1.9E-07 58.7 12.5 144 104-257 43-231 (344)
481 KOG1093 Predicted protein kina 97.0 0.0014 3.1E-08 65.5 6.0 165 144-376 27-191 (725)
482 PF07387 Seadorna_VP7: Seadorn 96.9 0.0054 1.2E-07 55.1 8.7 135 130-305 88-223 (308)
483 PLN02756 S-methyl-5-thioribose 96.8 0.025 5.3E-07 56.2 13.2 73 102-187 37-119 (418)
484 COG3173 Predicted aminoglycosi 96.7 0.02 4.3E-07 55.0 11.8 35 226-260 197-231 (321)
485 KOG2270 Serine/threonine prote 96.7 0.012 2.5E-07 56.9 10.0 139 102-258 149-314 (520)
486 TIGR01767 MTRK 5-methylthiorib 96.7 0.029 6.3E-07 54.7 12.4 73 104-187 2-84 (370)
487 cd05152 MPH2' Macrolide 2'-Pho 96.6 0.02 4.3E-07 54.3 11.1 31 228-258 186-217 (276)
488 COG5072 ALK1 Serine/threonine 96.6 0.01 2.2E-07 57.2 8.5 71 178-258 301-371 (488)
489 TIGR02906 spore_CotS spore coa 96.3 0.059 1.3E-06 51.9 12.6 30 227-257 187-216 (313)
490 PF03881 Fructosamin_kin: Fruc 96.3 0.035 7.6E-07 52.8 10.4 74 101-188 21-97 (288)
491 PLN02421 phosphotransferase, a 95.9 0.085 1.8E-06 51.4 11.5 30 228-257 183-213 (330)
492 COG2334 Putative homoserine ki 95.7 0.14 3.1E-06 49.6 11.6 143 105-257 34-228 (331)
493 PRK12396 5-methylribose kinase 95.6 0.11 2.3E-06 51.5 10.4 75 102-187 34-117 (409)
494 PTZ00384 choline kinase; Provi 95.4 0.19 4E-06 50.0 11.5 29 227-256 227-255 (383)
495 PRK06148 hypothetical protein; 95.2 0.22 4.7E-06 56.0 12.5 32 226-257 202-236 (1013)
496 KOG1236 Predicted unusual prot 95.1 0.09 1.9E-06 51.7 8.0 60 179-244 321-381 (565)
497 COG3001 Uncharacterized protei 94.3 0.33 7.1E-06 44.2 8.9 56 129-191 41-99 (286)
498 PF05445 Pox_ser-thr_kin: Poxv 94.0 0.091 2E-06 50.4 5.1 80 179-258 247-347 (434)
499 PTZ00296 choline kinase; Provi 93.8 0.79 1.7E-05 46.5 11.8 81 101-190 109-193 (442)
500 PRK10271 thiK thiamine kinase; 93.4 0.071 1.5E-06 47.1 3.2 29 228-257 78-106 (188)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-55 Score=430.93 Aligned_cols=291 Identities=57% Similarity=0.939 Sum_probs=252.9
Q ss_pred CccccchHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCee
Q 013504 83 NLRVFTFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLV 162 (441)
Q Consensus 83 ~~~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv 162 (441)
..+.|++.+++.+|++|...++||+|+||.||+|...++. .||||++........++|.+|+.+|.+++|||+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~------~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv 134 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGT------VVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLV 134 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCC------EEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcc
Confidence 6788999999999999999999999999999999987752 3999988765533146699999999999999999
Q ss_pred eEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc
Q 013504 163 KLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242 (441)
Q Consensus 163 ~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~ 242 (441)
+|+|||.+.+. +++||+||+++|+|.++|.......++|..+++|+.++|.||.|||..+.+.||||||||+|||||
T Consensus 135 ~LlGyC~e~~~---~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 135 KLLGYCLEGGE---HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred cEEEEEecCCc---eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 99999998774 349999999999999999875433899999999999999999999998878899999999999999
Q ss_pred CCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 013504 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 243 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~ 322 (441)
+++++||+|||+|+..+.. .........||.+|+|||++..+..+.++|||||||+++||+||+.|.+...+.....++
T Consensus 212 ~~~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred CCCCEEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 9999999999999876541 111111118999999999999999999999999999999999999999877666666688
Q ss_pred HhhhhhcccccchhhhcCCCCC-CcchH-HHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 323 EWVRPHLTDAKKFTMILDPKLE-GKYSI-KLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
.|..+.+.+. .+.+++|+.+. ..+.. .....+..++.+|++.+|.+||+|.+|+++|+.+.
T Consensus 291 ~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 291 EWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 9988777766 88899999987 56554 57778999999999999999999999999996654
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-52 Score=384.76 Aligned_cols=251 Identities=29% Similarity=0.440 Sum_probs=211.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+.+....||+|..|+||++.++.++.. +|+|.+..... ...+++.+|+++++.++||+||.+||.|.....
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i-----~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~--- 151 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKI-----YALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE--- 151 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeE-----EEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc---
Confidence 445556799999999999999988765 99999954332 345789999999999999999999999998774
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..+|+||||++|+|.+++.. .+.+++....+|+.+|++||.|||.. .+||||||||+|||++..|+|||||||.++
T Consensus 152 ~isI~mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~ 227 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSG 227 (364)
T ss_pred eEEeehhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccH
Confidence 24899999999999999976 47899999999999999999999963 399999999999999999999999999999
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCC--chhHHHHHHhhhhhcccccc
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR--PKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~ 334 (441)
.+... ...+++||..|||||.+.+..|+.++||||||+.++|+.+|+.||.... ......++.++
T Consensus 228 ~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I--------- 294 (364)
T KOG0581|consen 228 ILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI--------- 294 (364)
T ss_pred Hhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH---------
Confidence 76554 5678999999999999999999999999999999999999999997541 22223333332
Q ss_pred hhhhcCCCCCCcchH-HHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSI-KLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
++.. ....+. .+++++..++..||++||.+||++.++++
T Consensus 295 ----v~~p-pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 295 ----VDEP-PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ----hcCC-CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2211 122333 48899999999999999999999999998
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-51 Score=396.53 Aligned_cols=264 Identities=33% Similarity=0.560 Sum_probs=217.5
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+.+.+.||+|+||+||+|.++++.. ||||.+....... .+.|.+|+.+|.+++|||||+++|+|.....
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~------vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~--- 113 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDV------VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG--- 113 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCcee------EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---
Confidence 3444459999999999999988753 8999998755433 4589999999999999999999999987652
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-eEecccCCCcEEEcCCC-cEEEeecCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ-IIFRDFKSSNILLDEQW-NAKLSDFGL 254 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-iiHrDlKp~NILl~~~~-~~kl~DFGl 254 (441)
.++|||||+++|+|.+++..+....+++..++.++.||+.||.|||++ + ||||||||+|||++.++ .+||+|||+
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 248999999999999999875467999999999999999999999998 7 99999999999999998 999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccc--cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQ--TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
++...... ...+...||+.|||||++. ...|+.++||||||+++|||+||+.||....+......+
T Consensus 191 sr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v---------- 258 (362)
T KOG0192|consen 191 SREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV---------- 258 (362)
T ss_pred ceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH----------
Confidence 98754422 2234478999999999999 568999999999999999999999999876542211111
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhhccCCC
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAAETGTP 392 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~p 392 (441)
+....+...+..+++.+..++.+||..||..||++.+++..|+.+........+
T Consensus 259 ------~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~ 312 (362)
T KOG0192|consen 259 ------VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGP 312 (362)
T ss_pred ------HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCc
Confidence 111122233344778899999999999999999999999999999876554443
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-51 Score=383.00 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=209.9
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-------hHHHHHHHHHhccCCCCCeeeEEe
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-------HKEWVTEVNVLGVVEHPNLVKLIG 166 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~il~~l~hpnIv~l~~ 166 (441)
...+.|.+.+.||+|+||.|-+|..+.+++. ||||++.++.... .....+|++||++|+|||||++++
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~-----vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d 243 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQ-----VAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKD 243 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcE-----EEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEee
Confidence 3456788999999999999999999888764 9999998764432 123569999999999999999999
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC--
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-- 244 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-- 244 (441)
+|...+.. ||||||++||+|.+++.. .+.+.+.....+++|++.||.|||++ ||+||||||+|||+..+
T Consensus 244 ~f~~~ds~----YmVlE~v~GGeLfd~vv~--nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e 314 (475)
T KOG0615|consen 244 FFEVPDSS----YMVLEYVEGGELFDKVVA--NKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAE 314 (475)
T ss_pred eeecCCce----EEEEEEecCccHHHHHHh--ccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCc
Confidence 99988865 999999999999999987 46788888999999999999999998 99999999999999765
Q ss_pred -CcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCC---CccccchhHHHHHHHHHhCCCCCCCCCchh-HH
Q 013504 245 -WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL---TYKSDIWSFGVFLYELITGRRPLDRNRPKS-EQ 319 (441)
Q Consensus 245 -~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlG~il~elltG~~P~~~~~~~~-~~ 319 (441)
..+||+|||+|+.... .....+.||||.|.|||++.+..+ ..++|+||+||+||-+|+|.+||....... ..
T Consensus 315 ~~llKItDFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~ 391 (475)
T KOG0615|consen 315 DCLLKITDFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK 391 (475)
T ss_pred ceEEEecccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH
Confidence 7799999999998653 335678999999999999987653 347899999999999999999997544332 11
Q ss_pred HHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 320 KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.+...+- .+.......++++..+||.+||..||++||++.|+|+
T Consensus 392 eQI~~G~y--------------~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 392 EQILKGRY--------------AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHHhcCcc--------------cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 11111100 0112334578889999999999999999999999998
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-50 Score=379.38 Aligned_cols=251 Identities=29% Similarity=0.496 Sum_probs=206.7
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
..+|...+.||+|+||+||+|+++.++. .||||.+.... ....+.+..|+.+|+.++|||||.+++++..++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~-----~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~- 82 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGT-----EVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD- 82 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCc-----eEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-
Confidence 3578888999999999999999988775 49999998763 334566789999999999999999999999887
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC------CcE
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ------WNA 247 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~------~~~ 247 (441)
.+|||||||+||+|.+||+.+ +.+++..+..++.||+.||++||++ +||||||||+||||+.+ -.+
T Consensus 83 ---~i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 83 ---FIYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred ---eEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceE
Confidence 459999999999999999874 6899999999999999999999998 99999999999999764 458
Q ss_pred EEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 248 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
||+|||+|+.+... ....+.+|+|.|||||++....|+.|+|+||+|+|+|+|++|+.||+.....+....++..
T Consensus 155 KIADFGfAR~L~~~---~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~-- 229 (429)
T KOG0595|consen 155 KIADFGFARFLQPG---SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG-- 229 (429)
T ss_pred EecccchhhhCCch---hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc--
Confidence 99999999987754 3456789999999999999999999999999999999999999999866554433222111
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+....+...+..+.+++...+..+|.+|-+..+.+.
T Consensus 230 -------------~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 230 -------------NEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred -------------ccccCchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence 11112233344555667888888888888877655443
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-50 Score=396.52 Aligned_cols=248 Identities=27% Similarity=0.496 Sum_probs=214.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
..|...++||+|||+.||.+++..+++. ||+|++.+.... ..+.+.+||+|.+.|+|||||+++++|++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~-----~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEV-----VAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcE-----EEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence 5799999999999999999999777765 999998874432 34678899999999999999999999998875
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. |||.|+|.+++|..+++. .+.+++.+++.+++||+.||.|||+. +|||||||..|+||+++.+|||+|||
T Consensus 93 V----YivLELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 V----YIVLELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred e----EEEEEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 4 999999999999999985 57999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
||..+..++ ....+.+|||.|+|||++....++..+||||+||++|-||+|++||+...-.+....+...
T Consensus 164 LAt~le~~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~-------- 233 (592)
T KOG0575|consen 164 LATQLEYDG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN-------- 233 (592)
T ss_pred eeeeecCcc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc--------
Confidence 999876543 3466799999999999999999999999999999999999999999865433322222111
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
....|..++....+||..+|+.||.+||++++|+.
T Consensus 234 ----------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 234 ----------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ----------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11233466788999999999999999999999998
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-50 Score=372.86 Aligned_cols=243 Identities=29% Similarity=0.439 Sum_probs=206.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
.++|++.++||+|+||+||.++.++++.. +|+|++++..... .+....|..||..++||+||+++-.|++.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~ki-----YAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKI-----YAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCce-----eehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC
Confidence 46899999999999999999999887765 9999998865433 356778999999999999999999998877
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
. +|||+||+.||.|..+|++ .+.+++..+..++.+|+.||.|||++ +||||||||+|||||.+|.++|+||
T Consensus 99 k----LylVld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 99 K----LYLVLDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred e----EEEEEeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 4 5999999999999999986 57899999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
|+++.....+ ....+++||+.|||||++.+..|+..+|+||||+++|||++|.+||...+.....+.+...+
T Consensus 170 gL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k------ 241 (357)
T KOG0598|consen 170 GLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK------ 241 (357)
T ss_pred ccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc------
Confidence 9999654432 24556899999999999999999999999999999999999999997654332222211110
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP 371 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 371 (441)
....+.-++.+..+++.++|..||++|.
T Consensus 242 -----------~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 -----------LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----------CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 0112223567889999999999999996
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-51 Score=363.21 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=208.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeE-Eecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGY-CAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~-~~~~~~ 173 (441)
.+|++.++||+|.||+||++....++.. +|.|.+.-... +.......|+.+|++|+|||||+++++ |.++..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l-----~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e 93 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKL-----VALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE 93 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcch-----hhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence 4688888999999999999998887765 88888874333 234567899999999999999999984 443333
Q ss_pred CCeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEecccCCCcEEEcCCCcEEE
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ--IIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--iiHrDlKp~NILl~~~~~~kl 249 (441)
-++||||||++|+|...++. ..+..+++..+|+++.|++.||..+|++ .+. |+||||||.||+|+.+|.+||
T Consensus 94 ---vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKL 169 (375)
T KOG0591|consen 94 ---VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKL 169 (375)
T ss_pred ---hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceee
Confidence 25899999999999999863 3457899999999999999999999984 234 999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhc
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
+|||++++..... ....+.+|||.||+||.+.+.+|+.++||||+||++|||+.-++||.+.+-.. +...+..
T Consensus 170 GDfGL~r~l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~---L~~KI~q-- 242 (375)
T KOG0591|consen 170 GDFGLGRFLSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS---LCKKIEQ-- 242 (375)
T ss_pred ccchhHhHhcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH---HHHHHHc--
Confidence 9999999876542 34567899999999999999999999999999999999999999997653222 2111110
Q ss_pred ccccchhhhcCCCCCCcch-HHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYS-IKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.-....+ ..++..+.+||..|+..||+.||+...++..+..
T Consensus 243 ------------gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 ------------GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred ------------CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 0111223 5688999999999999999999997555555444
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-48 Score=378.43 Aligned_cols=258 Identities=31% Similarity=0.506 Sum_probs=218.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+.+..++.||+|-||+||.|.+++..+ ||+|.++... .....|.+|+.+|++|+|+|||+++|+|...+.
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~------vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~p--- 275 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTK------VAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEP--- 275 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCc------ccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCc---
Confidence 345566779999999999999998754 8999887643 335778899999999999999999999988764
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
+|||||||+.|+|.+||....+..+...+.+.++.|||+|++||+++ ++|||||...||||++++.+||+|||+|+
T Consensus 276 -iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 276 -IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred -eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccc
Confidence 49999999999999999987788999999999999999999999998 99999999999999999999999999999
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....+ .........-..-|+|||.+..+.++.+||||||||+||||+| |+.|+......+....++
T Consensus 352 ~~~d~-~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le------------ 418 (468)
T KOG0197|consen 352 LIGDD-EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE------------ 418 (468)
T ss_pred ccCCC-ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh------------
Confidence 54433 2333334445668999999999999999999999999999999 999997765443333222
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
...+-..|..||+.+.+++..||..+|++|||++.+...|+++...
T Consensus 419 -----~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 419 -----RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred -----ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 2223345567899999999999999999999999999999988654
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-48 Score=372.64 Aligned_cols=255 Identities=25% Similarity=0.409 Sum_probs=214.7
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccC-CCCCeeeEEeEE
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVV-EHPNLVKLIGYC 168 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l-~hpnIv~l~~~~ 168 (441)
+...++|..++.||.|+|++|++|+.+.++. .+|||++.+..... .+.+.+|-.+|.+| .||.|++|+..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~k-----eYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGK-----EYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCc-----eeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence 4556899999999999999999999887765 49999998765432 24567899999999 899999999999
Q ss_pred eccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEE
Q 013504 169 AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248 (441)
Q Consensus 169 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~k 248 (441)
++... +|+|+||+++|+|.++|++ .+.|++..+..++.+|+.||+|||++ |||||||||+|||||.++.+|
T Consensus 144 QD~~s----LYFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEES----LYFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccc----eEEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 88774 5999999999999999987 48999999999999999999999998 999999999999999999999
Q ss_pred EeecCCCCCCCCCCCc---------ce--eeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchh
Q 013504 249 LSDFGLARLGPSDGLS---------HV--STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317 (441)
Q Consensus 249 l~DFGla~~~~~~~~~---------~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~ 317 (441)
|+|||.|+.+...... .. ...++||..|.+||++..+..+..+|+|+||||||+|+.|.+||...++-.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl 294 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL 294 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence 9999999976543211 11 256999999999999999999999999999999999999999996554322
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..+.+.. +.-.+++.+++.+.+|+.++|..||.+|++.++|-+.
T Consensus 295 iFqkI~~------------------l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 IFQKIQA------------------LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHHHH------------------hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1111111 1223455677889999999999999999999888873
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4e-48 Score=348.41 Aligned_cols=266 Identities=25% Similarity=0.346 Sum_probs=210.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-h-hHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-G-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
+.|+...++|+|+||+||+|+++.+++. ||||++...... . .+-.++|+++|++++|||+|.++.+|....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqI-----VAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr-- 74 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQI-----VAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR-- 74 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccE-----EEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc--
Confidence 4678888999999999999999999876 999998765542 2 245689999999999999999999998766
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++||+|||+. ++.+-|... ...++...+..+++|++.|+.|+|++ +||||||||+||||+.+|.+||||||+
T Consensus 75 --klhLVFE~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 75 --KLHLVFEYCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred --eeEEEeeecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 45999999966 555555543 56789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc--
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD-- 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-- 331 (441)
|+.+...+ ...+.++.|.+|.|||.+.+ ..|+..+||||+||++.||++|.+-|.+....+....+......+..
T Consensus 148 AR~L~~pg--d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prh 225 (396)
T KOG0593|consen 148 ARTLSAPG--DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRH 225 (396)
T ss_pred hHhhcCCc--chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHH
Confidence 99876433 34567899999999999987 68999999999999999999999999877655544333322211111
Q ss_pred ------ccchhhhcCCCCCCc-----chHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 ------AKKFTMILDPKLEGK-----YSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ------~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...+..+.-|..... --+..+.-+.+++..||..||.+|++.++++.
T Consensus 226 q~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 226 QSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111111221111 11245567889999999999999999999987
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-47 Score=360.64 Aligned_cols=258 Identities=30% Similarity=0.462 Sum_probs=206.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|...+.||+|+||.||++.+..++.. .|||.+........+.+.+|+.+|.+++|||||+++|....... .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~-----~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~--~ 89 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGEL-----MAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN--D 89 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcc-----eeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC--e
Confidence 4577788999999999999998876544 89999877644445678899999999999999999997544443 2
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC-CCcEEEeecCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAKLSDFGLA 255 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla 255 (441)
.++++|||+++|+|.+++....+ .+++..+..+.+||+.||.|||++ |||||||||+||||+. ++.+||+|||++
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLA 165 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccc
Confidence 46899999999999999987544 899999999999999999999998 9999999999999999 799999999999
Q ss_pred CCCCC-CCCcceeeceecccCcCCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 256 RLGPS-DGLSHVSTAVVGTIGYAAPEYIQTGR-LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 256 ~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+.... ...........||+.|||||++..+. ...++|||||||++.||+||+.||... ......+...
T Consensus 166 ~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~i--------- 235 (313)
T KOG0198|consen 166 KKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLI--------- 235 (313)
T ss_pred cccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHH---------
Confidence 87553 11122334589999999999998633 345999999999999999999999753 1111111111
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
.... ....++..++.+..+++.+|+..+|++|||+.++|+..
T Consensus 236 ----g~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 236 ----GRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred ----hccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 0111 11245556888999999999999999999999999853
No 13
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-47 Score=339.82 Aligned_cols=237 Identities=29% Similarity=0.456 Sum_probs=205.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh---HHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH---KEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|+..+.||.|+||.|.+++.+.++.. +|+|++.+...... +...+|..+|+.+.||+++++++.|.+.+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~y-----YAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~- 117 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNY-----YAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS- 117 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCce-----eehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-
Confidence 5789999999999999999999888765 99999988765444 34568999999999999999999988766
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
++||||||++||.|..++++ .+++++..+..++.||+.||.|||+. +|++|||||+|||||.+|.+||+|||
T Consensus 118 ---~lymvmeyv~GGElFS~Lrk--~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 118 ---NLYMVMEYVPGGELFSYLRK--SGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred ---eEEEEEeccCCccHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEecc
Confidence 45999999999999999976 57899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+|+.... ...+.||||.|+|||+++..+|+.++|+|||||++|||+.|.+||...++. .+.+.+
T Consensus 190 FAK~v~~-----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~---~iY~KI-------- 253 (355)
T KOG0616|consen 190 FAKRVSG-----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI---QIYEKI-------- 253 (355)
T ss_pred ceEEecC-----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH---HHHHHH--------
Confidence 9997643 366799999999999999999999999999999999999999999776652 222211
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCC
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGR 370 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 370 (441)
+... -.+|.-++..+.+|+..+|+.|-.+|
T Consensus 254 -----~~~~--v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 254 -----LEGK--VKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -----HhCc--ccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 1111 23555677889999999999999988
No 14
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-46 Score=366.88 Aligned_cols=268 Identities=26% Similarity=0.419 Sum_probs=209.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.+.||+|+||.||+|.+...........||||++..... .....+.+|+.+|..+ +||||++++++|...+.
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 467999999999999999999875443333445699999875432 2345688999999999 89999999998875443
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC-------------------------------------------------------
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF------------------------------------------------------- 198 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------- 198 (441)
..++||||+++|+|.+++....
T Consensus 86 ---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 86 ---PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred ---ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 3589999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecc
Q 013504 199 -----QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGT 273 (441)
Q Consensus 199 -----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt 273 (441)
...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...............++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 13477888999999999999999998 9999999999999999999999999999865432222222334567
Q ss_pred cCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHH
Q 013504 274 IGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLA 352 (441)
Q Consensus 274 ~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (441)
+.|+|||++.+..++.++|||||||++|||++ |..||........ ..... .... ....+..++
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~~~~----~~~~----------~~~~~~~~~ 303 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FCQRL----KDGT----------RMRAPENAT 303 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HHHHH----hcCC----------CCCCCCCCC
Confidence 89999999999999999999999999999997 9999975432211 11111 0000 001122455
Q ss_pred HHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 353 QKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 353 ~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
..+.+++.+||+.||.+||++.+|++.|++++.
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 679999999999999999999999999999875
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-46 Score=359.25 Aligned_cols=270 Identities=25% Similarity=0.348 Sum_probs=213.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.+.|+.++.||+|+||.||+|++..+++. ||+|++...... ...-..+||.||++|+||||++|.+...+...
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgki-----vALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~ 190 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKI-----VALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS 190 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcE-----EEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC
Confidence 45688888999999999999999888765 999999876532 23456799999999999999999999988743
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. .+|||+|||+. +|.-++.. .+-.|++.++..++.|++.||.|||++ +|+|||||.+|||||.+|.+||+|||
T Consensus 191 ~--siYlVFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 191 G--SIYLVFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred c--eEEEEEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 3 46999999965 88888764 356899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
||+++.... ....+..+-|.+|.|||++.+. .|+.++|+||.||||.||+.|++.|.+....+....+-.+.....+.
T Consensus 264 LAr~y~~~~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~ 342 (560)
T KOG0600|consen 264 LARFYTPSG-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTED 342 (560)
T ss_pred ceeeccCCC-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChh
Confidence 999876554 2335677889999999998874 69999999999999999999999998877665555443332211110
Q ss_pred -cc---hh--hhcCCCCC--Ccc---hHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 -KK---FT--MILDPKLE--GKY---SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 -~~---~~--~~~~~~~~--~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+. +. ..+.+... ..+ -..++....+|+..+|+.||.+|.|+.++|+
T Consensus 343 ~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 343 YWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 00 00 00101000 001 1235567889999999999999999999987
No 16
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-46 Score=367.91 Aligned_cols=244 Identities=25% Similarity=0.465 Sum_probs=208.9
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccC-CCCCeeeEEeEEec
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVV-EHPNLVKLIGYCAE 170 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 170 (441)
..++|...++||+|.||+|+++..+.+++. +|||.+++...- +.+..+.|.+|+... +||.+++++..|++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~-----yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEY-----YAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcE-----EEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc
Confidence 447899999999999999999999998875 999999986543 346678899998887 59999999999998
Q ss_pred cccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 171 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
.+. +|+||||+.||++..+.+ ...|++..+..|+..|+.||+|||++ +|||||||.+|||||.+|.+||+
T Consensus 441 ~~~----l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 441 KEH----LFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred CCe----EEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 884 599999999999554443 36899999999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
|||+++.....+ ..+++++|||.|||||++.+..|+.++|+|||||+|||||.|+.||.+.+..+.-+.+-
T Consensus 511 DFGlcKe~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~------- 581 (694)
T KOG0694|consen 511 DFGLCKEGMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV------- 581 (694)
T ss_pred ccccccccCCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh-------
Confidence 999999765333 35778999999999999999999999999999999999999999998665433222211
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
. .+..++..++.+...+++++|.++|++|.-+
T Consensus 582 ---------~--d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 582 ---------N--DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---------c--CCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1 1234666788899999999999999999876
No 17
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=364.63 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=216.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
..|.....||+|+.|.||.+....++.. ||||++........+-+++|+.+|+..+|+|||++++.|...+.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~-----VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de--- 344 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQE-----VAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDE--- 344 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCce-----EEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccce---
Confidence 4688888999999999999998877664 99999988876666778899999999999999999998877754
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
+++||||++||+|.+.+.. ..+++.++..|+++++.||+|||.+ +|+|||||.+|||++.+|.+||+|||+|.
T Consensus 345 -LWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 345 -LWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred -eEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 5999999999999999976 4699999999999999999999998 99999999999999999999999999999
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
.+..... ...+.+|||.|||||++....|++++||||||++++||+-|++||-...+.....++..
T Consensus 418 qi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~------------ 483 (550)
T KOG0578|consen 418 QISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT------------ 483 (550)
T ss_pred ccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh------------
Confidence 8765533 45678999999999999999999999999999999999999999976554433332211
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.....-..+..++..+.+++.+||+.|+++||++.|+|+
T Consensus 484 ---ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 484 ---NGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ---cCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 111222345578899999999999999999999999998
No 18
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-46 Score=362.62 Aligned_cols=250 Identities=29% Similarity=0.469 Sum_probs=207.9
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcccc----Cc-hhhHHHHHHHHHhccCC-CCCeeeEEeEE
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR----GL-QGHKEWVTEVNVLGVVE-HPNLVKLIGYC 168 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~il~~l~-hpnIv~l~~~~ 168 (441)
....|.+.+.||+|+||.|+.|.+..++. .||+|++.+. .. ...+.+.+|+.++++++ ||||++++.++
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~-----~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~ 89 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGE-----KVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF 89 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCC-----eEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE
Confidence 45689999999999999999999987764 3999977664 11 22345668999999998 99999999999
Q ss_pred eccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-CcE
Q 013504 169 AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-WNA 247 (441)
Q Consensus 169 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-~~~ 247 (441)
..... .|+|||||.||+|.+++.. .+++.+..+..+++|++.|+.|||++ ||+||||||+|||++.+ +++
T Consensus 90 ~t~~~----~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 90 ATPTK----IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred ecCCe----EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCE
Confidence 88774 4999999999999999987 57899999999999999999999998 99999999999999999 999
Q ss_pred EEeecCCCCCCCCCCCcceeeceecccCcCCccccccCC-CC-ccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-LT-YKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 248 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
||+|||++.... .......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||+..... .+...+
T Consensus 161 Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~---~l~~ki 235 (370)
T KOG0583|consen 161 KLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP---NLYRKI 235 (370)
T ss_pred EEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH---HHHHHH
Confidence 999999999763 1223466789999999999999877 86 6799999999999999999999863321 111111
Q ss_pred hhhcccccchhhhcCCCCCCcchHHH-HHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKL-AQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. . .-.++..+ +.++..|+.+||..||.+|+++.+|+.
T Consensus 236 ~~---~------------~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 236 RK---G------------EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred hc---C------------CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 11 0 01122233 788999999999999999999999994
No 19
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.8e-46 Score=360.19 Aligned_cols=254 Identities=25% Similarity=0.393 Sum_probs=209.9
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
..++|+.+..||+|+||.||+|+-+.+++. +|+|++++..... .+.++.|-.+|....+|+||+||-.|++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~i-----yAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEI-----YAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcE-----EeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC
Confidence 347899999999999999999999999886 9999999876543 34567899999999999999999999987
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+. +||||||++||++..+|.. ...|++..+..++.+++.||..||+. |+|||||||+|+|||..|++||+|
T Consensus 214 ~~----LYLiMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 214 EY----LYLIMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred Ce----eEEEEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecc
Confidence 74 5999999999999999976 47999999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCC----------------------CCCc------c-----------------eeeceecccCcCCccccccCC
Q 013504 252 FGLARLGPS----------------------DGLS------H-----------------VSTAVVGTIGYAAPEYIQTGR 286 (441)
Q Consensus 252 FGla~~~~~----------------------~~~~------~-----------------~~~~~~gt~~y~aPE~~~~~~ 286 (441)
|||+.-... .... . .....+|||.|||||++.+..
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 999853211 0000 0 012368999999999999999
Q ss_pred CCccccchhHHHHHHHHHhCCCCCCCCCchhH-HHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcc
Q 013504 287 LTYKSDIWSFGVFLYELITGRRPLDRNRPKSE-QKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLAR 365 (441)
Q Consensus 287 ~~~~~DvwSlG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 365 (441)
|+..+|+||||||+||||.|.+||....+... .+++.|-..... +....++.+..+||.+||+
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f---------------P~~~~~s~eA~DLI~rll~- 428 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF---------------PEEVDLSDEAKDLITRLLC- 428 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC---------------CCcCcccHHHHHHHHHHhc-
Confidence 99999999999999999999999987776544 344555422111 1112345789999999999
Q ss_pred cCCCCCC---HHHHHH
Q 013504 366 QAKGRPK---MSEVVE 378 (441)
Q Consensus 366 dP~~RPs---~~evl~ 378 (441)
||++|.. ++||-+
T Consensus 429 d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 429 DPENRLGSKGAEEIKK 444 (550)
T ss_pred CHHHhcCcccHHHHhc
Confidence 9999976 555544
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-47 Score=359.50 Aligned_cols=270 Identities=23% Similarity=0.338 Sum_probs=215.6
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHH-HHHHHHHhccCC-CCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKE-WVTEVNVLGVVE-HPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~-~~~E~~il~~l~-hpnIv~l~~~~~~~ 171 (441)
...++|.+++.||.|+||.||+|+...+++. ||||.+++.-....+. =+||+..|++|+ ||||+++.+++.+.
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~-----VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGEL-----VAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN 81 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCce-----eeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence 4557899999999999999999998887765 9999998765543222 258999999998 99999999999887
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+. .+|+||||| ..+|++.++.+ +..|++..+..|++||++||+|+|.+ |+.|||+||+|||+..+..+||+|
T Consensus 82 ~~---~L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaD 153 (538)
T KOG0661|consen 82 DR---ILYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIAD 153 (538)
T ss_pred Cc---eEeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecc
Confidence 64 469999999 56999999988 78999999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCcccc-ccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh--
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYI-QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH-- 328 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-- 328 (441)
||+||..... ...+.++.|.+|.|||++ +.+-|+.+.||||+|||++|+.+-++-|.+....+....+..+...
T Consensus 154 FGLARev~Sk---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~ 230 (538)
T KOG0661|consen 154 FGLAREVRSK---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPD 230 (538)
T ss_pred cccccccccC---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCc
Confidence 9999976543 345678999999999976 4577999999999999999999999999876654443322221111
Q ss_pred ---cccccchhhhcCCCCC-------CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 329 ---LTDAKKFTMILDPKLE-------GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 329 ---~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
+..+......+.-.+. ...-..++.+..++|.+|+..||.+|||+.++++.
T Consensus 231 ~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 231 KDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred cccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111111111111 11112367889999999999999999999999984
No 21
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-46 Score=328.94 Aligned_cols=250 Identities=24% Similarity=0.438 Sum_probs=215.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
.++|++++.||+|.||.||.|..+.+... ||+|++.+.... ..+++.+|++|-+.|+||||+++|++|.+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~I-----valKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFI-----VALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcE-----EEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 36799999999999999999998877664 999999876532 2467889999999999999999999999877
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
. .||++||.++|+|+..|.......+++.....++.|++.||.|+|.+ +||||||||+|+|++..+.+||+||
T Consensus 96 r----iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 96 R----IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred e----eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCC
Confidence 5 49999999999999999976678899999999999999999999988 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
|.+...+.. ...+.+||..|.|||+..+..++..+|+|++|++.||++.|.+||...... +....++.
T Consensus 169 GwsV~~p~~----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~---etYkrI~k----- 236 (281)
T KOG0580|consen 169 GWSVHAPSN----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS---ETYKRIRK----- 236 (281)
T ss_pred CceeecCCC----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH---HHHHHHHH-----
Confidence 999865422 456789999999999999999999999999999999999999999755422 22222211
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.+-.++..++....++|.+|+..+|.+|.+..++++.
T Consensus 237 ----------~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 237 ----------VDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ----------ccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1123345677889999999999999999999999873
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-45 Score=344.62 Aligned_cols=267 Identities=25% Similarity=0.417 Sum_probs=216.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|+....||.|..++||+|....++.. ||||++....... ...+.+|+..|+.++||||++++..|..+..
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~-----VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~-- 98 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEV-----VAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE-- 98 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCE-----EEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce--
Confidence 6799999999999999999999888765 9999998766554 4788899999999999999999999988774
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
+++||.||.+|++.+.+.......+++..+..|++++++||.|||++ |.||||||+.||||+.+|.|||+|||.+
T Consensus 99 --LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 99 --LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred --eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceee
Confidence 59999999999999999988888899999999999999999999998 9999999999999999999999999988
Q ss_pred CCCCCCCCcc-ee-eceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 256 RLGPSDGLSH-VS-TAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 256 ~~~~~~~~~~-~~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
..+...+... .. .+++||++|||||++.. ..|+.|+||||||++..||.+|..||....+.... ...+. +
T Consensus 174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL--l~tLq----n 247 (516)
T KOG0582|consen 174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL--LLTLQ----N 247 (516)
T ss_pred eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH--HHHhc----C
Confidence 7654443221 12 67899999999999543 57999999999999999999999999766543221 11111 1
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKI 383 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 383 (441)
...... -..+.......++..+.+++..||.+||++|||+++++. ++...
T Consensus 248 ~pp~~~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 248 DPPTLL--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred CCCCcc--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 100000 001111222345668999999999999999999999998 45443
No 23
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-45 Score=342.69 Aligned_cols=254 Identities=27% Similarity=0.390 Sum_probs=210.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
+.|+..+.||+|.-|+||++..+++... +|+|++.+..... ..+...|-+||..+.||.++.||+.|..+.-
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~-----fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCL-----FAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCce-----EEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 5688888999999999999999988644 9999998866543 3456789999999999999999999988774
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.|||||||+||+|...++.+.++.+++..+..++.+|+.||+|||.. |||+|||||+||||.++|.+.|+||.
T Consensus 152 ----~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 152 ----SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ----eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 49999999999999999998899999999999999999999999987 99999999999999999999999999
Q ss_pred CCCCCCC---------------------------------C-C--------------------CcceeeceecccCcCCc
Q 013504 254 LARLGPS---------------------------------D-G--------------------LSHVSTAVVGTIGYAAP 279 (441)
Q Consensus 254 la~~~~~---------------------------------~-~--------------------~~~~~~~~~gt~~y~aP 279 (441)
|+..... . . ....+..++||-.|+||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 8753211 0 0 00123467899999999
Q ss_pred cccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHH
Q 013504 280 EYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVA 359 (441)
Q Consensus 280 E~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 359 (441)
|++.+...+.++|||+|||++||||.|..||.+...... +..++-..+.-......+..+.+||
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T----------------l~NIv~~~l~Fp~~~~vs~~akDLI 368 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET----------------LRNIVGQPLKFPEEPEVSSAAKDLI 368 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh----------------HHHHhcCCCcCCCCCcchhHHHHHH
Confidence 999999999999999999999999999999976543322 1222222222222236778899999
Q ss_pred HHhhcccCCCCCC----HHHHHH
Q 013504 360 NKCLARQAKGRPK----MSEVVE 378 (441)
Q Consensus 360 ~~cl~~dP~~RPs----~~evl~ 378 (441)
+++|.+||++|.. +.||-+
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred HHHhccChhhhhccccchHHhhc
Confidence 9999999999998 666655
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-46 Score=360.54 Aligned_cols=264 Identities=28% Similarity=0.477 Sum_probs=212.3
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEec
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 170 (441)
....+++.+...||+|.||+||+|.|.++ ||||++...... ..+.|..|+.++++-+|.||+-+.|||..
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~whGd--------VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWHGD--------VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccCHHHhhccceeccccccceeecccccc--------eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 34456677788899999999999999876 999999876543 35789999999999999999999999987
Q ss_pred cccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 171 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
+.. .||+-+|+|.+|+.+|+.. ...|+..+.+.|++||++|+.|||.+ +|||||||..||||.+++.|||+
T Consensus 460 p~~-----AIiTqwCeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIg 530 (678)
T KOG0193|consen 460 PPL-----AIITQWCEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIG 530 (678)
T ss_pred Cce-----eeeehhccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEe
Confidence 652 7899999999999999864 36799999999999999999999999 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
||||+..-.............|...|||||+++. .+|+..+||||||+++|||++|..||...... +-+....+.
T Consensus 531 DFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d--qIifmVGrG 608 (678)
T KOG0193|consen 531 DFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD--QIIFMVGRG 608 (678)
T ss_pred cccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh--heEEEeccc
Confidence 9999875332222222334568889999999864 56899999999999999999999999733221 111110111
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
++. +. ......++++++.+|+..||..++++||.+.+|+..|+.++..
T Consensus 609 ~l~----------pd-~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 609 YLM----------PD-LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ccC----------cc-chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 100 00 1123346788999999999999999999999999999988763
No 25
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.7e-46 Score=376.41 Aligned_cols=267 Identities=27% Similarity=0.465 Sum_probs=227.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+....+.||+|+||+||+|...+.........||||.++..... ...+|.+|+++|..++|||||+|+|+|.+.+..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~- 564 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL- 564 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee-
Confidence 455566779999999999999887766667778999999987765 568899999999999999999999999998875
Q ss_pred eeEEEEEeccCCCChHHHHhhcC--------CCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF--------QAT----LPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~--------~~~----l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~ 243 (441)
|+|+|||..|+|.+||..+. +.. ++..+.+.|+.|||.|+.||-++ .+|||||..+|+||.+
T Consensus 565 ---~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 565 ---CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE 638 (774)
T ss_pred ---EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc
Confidence 99999999999999997431 223 88899999999999999999988 9999999999999999
Q ss_pred CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHH
Q 013504 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 244 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~ 322 (441)
+..|||+|||++|.....+.........-..+|||||.+..++|+.+||||||||+|||+++ |+.||.+....+..+.+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 99999999999998776665555545566789999999999999999999999999999999 99999765544333322
Q ss_pred HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
. . ..+ -..+.++|.++.+|+..||+.+|.+||+++||-..|+......
T Consensus 719 ~---~-------------g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 719 R---A-------------GQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred H---c-------------CCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 2 1 112 3456689999999999999999999999999999999987653
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.8e-46 Score=357.42 Aligned_cols=247 Identities=31% Similarity=0.497 Sum_probs=212.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|.+.+.||+|+||.||||+.+.+.+. ||+|.+.+... +..+.+.+|++|++.++||||+.++++|....+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~-----vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~- 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQV-----VAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAH- 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeE-----EEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccce-
Confidence 5788899999999999999998887765 99999987654 345678899999999999999999999988774
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
+++|.|||.| +|..+|.. .+.++++.+..++.+++.||.|||++ +|+|||+||.||||+.++.+|+||||+
T Consensus 76 ---~~vVte~a~g-~L~~il~~--d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 76 ---LWVVTEYAVG-DLFTILEQ--DGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred ---EEEEehhhhh-hHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 5999999966 99999977 68999999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
|+..... ....+.+.|||.|||||++.+.+|+..+|+||+|||+||+++|++||-.. ....++..+ +.+
T Consensus 147 Ar~m~~~--t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~---si~~Lv~~I---~~d--- 215 (808)
T KOG0597|consen 147 ARAMSTN--TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR---SITQLVKSI---LKD--- 215 (808)
T ss_pred hhhcccC--ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH---HHHHHHHHH---hcC---
Confidence 9976543 45667789999999999999999999999999999999999999999532 122222221 111
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+ ..++...+..+..++...|.+||..|.+-.+++.
T Consensus 216 ------~---v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 216 ------P---VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ------C---CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1 2344577889999999999999999999999987
No 27
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.1e-45 Score=360.13 Aligned_cols=266 Identities=24% Similarity=0.410 Sum_probs=209.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
.++|++.+.||+|+||.||+|++...+.......||+|.+...... ....+.+|+.+++.+ +||||++++++|.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 3579999999999999999999876555445556999999764432 345678999999999 89999999999987664
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC-------------------------------------------------------
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF------------------------------------------------------- 198 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------- 198 (441)
.++||||+++|+|.+++....
T Consensus 117 ----~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 117 ----VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred ----eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 499999999999999985421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcc
Q 013504 199 -------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSH 265 (441)
Q Consensus 199 -------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~ 265 (441)
..++++..++.++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++.........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 12478889999999999999999998 99999999999999999999999999998654332222
Q ss_pred eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCC
Q 013504 266 VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLE 344 (441)
Q Consensus 266 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (441)
......++..|+|||++.+..++.++|||||||++|||++ |+.||........ ....... ...
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~~~~~~--------------~~~ 333 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FYKMVKR--------------GYQ 333 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HHHHHHc--------------ccC
Confidence 2223345678999999988899999999999999999997 9999965432211 1111100 001
Q ss_pred CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 345 GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 345 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
...+...+.++.+++.+||+.||++||++.+|++.|++++
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1111124578999999999999999999999999999875
No 28
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-44 Score=359.13 Aligned_cols=265 Identities=25% Similarity=0.407 Sum_probs=207.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.+.||+|+||.||+|++...........||||++..... ...+.+.+|+.+|..+ +||||++++++|...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 357899999999999999999875443334455699999875432 2345688999999999 89999999999987764
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC-------------------------------------------------------
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF------------------------------------------------------- 198 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------- 198 (441)
.++|||||++|+|.+++..+.
T Consensus 114 ----~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 114 ----TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred ----ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 499999999999999986432
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 199 ------------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 199 ------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 12478889999999999999999998 999999999999999999999999999986544
Q ss_pred CCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 261 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
...........++..|+|||++.+..++.++|||||||++|||++ |..||....... .....+....
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~~---------- 334 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKEGY---------- 334 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHhCc----------
Confidence 322222223445678999999999999999999999999999998 889986543221 1111111110
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
....+...+.++.+|+.+||+.||++||++.+|++.|++.
T Consensus 335 ----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 ----RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0001112356789999999999999999999999999864
No 29
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-45 Score=344.40 Aligned_cols=265 Identities=27% Similarity=0.383 Sum_probs=210.1
Q ss_pred chHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--------------hhHHHHHHHHHh
Q 013504 88 TFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--------------GHKEWVTEVNVL 153 (441)
Q Consensus 88 ~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~il 153 (441)
.-.+-+...++|+++..||+|.||.|-+|+...++.. ||||++.+.... ..+...+|+.||
T Consensus 88 ~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l-----~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIail 162 (576)
T KOG0585|consen 88 DDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKL-----YAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAIL 162 (576)
T ss_pred cCcccceehhheehhhhhcCCccceEEEEeecCCCcE-----EEEEeechhhhhhhcccccccccccCcHHHHHHHHHHH
Confidence 3344456678999999999999999999998777654 999999864321 124678999999
Q ss_pred ccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 013504 154 GVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQAT-LPWNTRLKIAQDAARGLAYLHEGMDFQIIFR 232 (441)
Q Consensus 154 ~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHr 232 (441)
++++|||||+|+.+..+.... .+|||+|||..|.+...=. .+. +.+.++++|+++++.||.|||.+ |||||
T Consensus 163 Kkl~H~nVV~LiEvLDDP~s~--~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHR 234 (576)
T KOG0585|consen 163 KKLHHPNVVKLIEVLDDPESD--KLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHR 234 (576)
T ss_pred HhcCCcCeeEEEEeecCcccC--ceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhc---Ceecc
Confidence 999999999999998776654 6799999999988754432 344 89999999999999999999999 99999
Q ss_pred ccCCCcEEEcCCCcEEEeecCCCCCCCCC---CCcceeeceecccCcCCccccccCC----CCccccchhHHHHHHHHHh
Q 013504 233 DFKSSNILLDEQWNAKLSDFGLARLGPSD---GLSHVSTAVVGTIGYAAPEYIQTGR----LTYKSDIWSFGVFLYELIT 305 (441)
Q Consensus 233 DlKp~NILl~~~~~~kl~DFGla~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~ellt 305 (441)
||||+|+||+++|.+||+|||.+...... +........+|||.|+|||...++. .+.+.||||+||+||.|+.
T Consensus 235 DIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllf 314 (576)
T KOG0585|consen 235 DIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLF 314 (576)
T ss_pred ccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhh
Confidence 99999999999999999999999865322 1112223479999999999887633 3567899999999999999
Q ss_pred CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 306 GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 306 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
|+.||.+.... .+ +..+++..+.-...+++...+.+||.++|++||+.|.+..+|.....
T Consensus 315 G~~PF~~~~~~---~l-------------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 315 GQLPFFDDFEL---EL-------------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ccCCcccchHH---HH-------------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 99999754322 12 12233333433344467788999999999999999999999877543
No 30
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-44 Score=341.20 Aligned_cols=250 Identities=20% Similarity=0.353 Sum_probs=200.3
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
..||+|++|.||+|.+.+. .||||.+....... .+.+.+|+.+|.+++||||+++++++.+........+
T Consensus 26 ~~i~~g~~~~v~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNK-------EVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEECCE-------EEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence 5799999999999998432 49999987654332 3567799999999999999999999876222222468
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+||||+++|+|.+++.. ...+++...+.++.+++.||.|||+. .+++||||||+|||++.++.+||+|||+++...
T Consensus 99 lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 99 LILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred EEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 99999999999999976 35789999999999999999999973 278899999999999999999999999998643
Q ss_pred CCCCcceeeceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
.. .....||..|+|||++.+ ..++.++|||||||++|||++|..||......... ..+.. .
T Consensus 175 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~---~~i~~---~------ 237 (283)
T PHA02988 175 SP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY---DLIIN---K------ 237 (283)
T ss_pred cc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH---HHHHh---c------
Confidence 32 123568999999999976 68999999999999999999999999765432211 11100 0
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
......+..++..+.+++.+||+.||++||++.++++.|+.+.
T Consensus 238 ----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 238 ----NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 0011122346778999999999999999999999999998764
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-45 Score=356.95 Aligned_cols=248 Identities=26% Similarity=0.428 Sum_probs=210.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-c--hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-L--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.-|+.++.||.|+.|.|-+|++..|++. +|||++.+.. . .....+.+|+.||+.+.||||+++|+++.+...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGql-----aaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQL-----AAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH 86 (786)
T ss_pred cceeccccccCCCCceehhhhcccccce-----eEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence 4578888999999999999999998876 8999988752 1 123457799999999999999999999988764
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
+|+|.||++||.|+++|.. .+++++.++.++++||+.|+.|||.. +|+||||||+|+|||..+++||+|||
T Consensus 87 ----lylvlEyv~gGELFdylv~--kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 87 ----LYLVLEYVPGGELFDYLVR--KGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred ----EEEEEEecCCchhHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccc
Confidence 5999999999999999987 47999999999999999999999988 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCC-ccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
+|..-... ....+.||.|.|.+||++.+.+|+ .++||||.|||||.||||+.||++.+-. .++..+....
T Consensus 158 MAsLe~~g---klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir---~LLlKV~~G~--- 228 (786)
T KOG0588|consen 158 MASLEVPG---KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR---VLLLKVQRGV--- 228 (786)
T ss_pred eeecccCC---ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH---HHHHHHHcCc---
Confidence 99875443 245668999999999999999985 6899999999999999999999855422 2222222211
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
-..+..++.+..+|+.+||..||++|.|+++|++.
T Consensus 229 ------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 229 ------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 12344678899999999999999999999999984
No 32
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2e-44 Score=319.41 Aligned_cols=266 Identities=23% Similarity=0.362 Sum_probs=210.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.+|...+.||+|.||.||+|++..+++. ||||+++..+..+ .....+|+..|+.++|+||+.++++|...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~-----VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKR-----VAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcE-----EEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCce
Confidence 3577888999999999999998887765 9999998765432 35678999999999999999999999887754
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.||+||++ .+|+..++.+ ...+....+..++.++++||+|||.+ .|+||||||.|+|++.+|.+||+|||+
T Consensus 77 ----~lVfEfm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 ----SLVFEFMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred ----EEEEEecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 89999995 5999999865 46889999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh--------
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV-------- 325 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~-------- 325 (441)
|+........ ....+-|.+|.|||.+.| ..|+..+||||.|||+.||+-|.+-|.+....+....+-.+
T Consensus 148 Ar~f~~p~~~--~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~ 225 (318)
T KOG0659|consen 148 ARFFGSPNRI--QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQ 225 (318)
T ss_pred hhccCCCCcc--cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCccc
Confidence 9987765433 233478999999998877 46999999999999999999988878766554443332111
Q ss_pred hhhcccccchhhhc---CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 326 RPHLTDAKKFTMIL---DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 326 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
++.+..-..+..+. .+.+. ..-..++.++.+|+..+|..||.+|+++.+++++
T Consensus 226 WP~~~~lpdY~~~~~~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 226 WPEMTSLPDYVKIQQFPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CccccccccHHHHhcCCCCccc-cccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111111111 11111 1333456677999999999999999999999984
No 33
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.7e-44 Score=340.83 Aligned_cols=252 Identities=26% Similarity=0.457 Sum_probs=202.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.|+..+.||+|+||.||+|.+..++.. ||+|.+...... ....+.+|+.++..++|+||+++++++.+.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-- 73 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKM-----YACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCce-----EEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--
Confidence 377889999999999999998876654 999988654322 2345778999999999999999999987765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+|||+++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 74 --ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred --eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 359999999999999888654445789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+.. ....
T Consensus 149 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~---~~~~--- 219 (285)
T cd05631 149 AVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR---RVKE--- 219 (285)
T ss_pred cEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH---Hhhc---
Confidence 98653321 22345799999999999999999999999999999999999999976543221111110 0000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
....++..++..+.+|+.+||+.||.+||+ ++++++
T Consensus 220 --------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 220 --------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred --------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 011223345678999999999999999997 777776
No 34
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=333.00 Aligned_cols=282 Identities=24% Similarity=0.315 Sum_probs=218.2
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcc--ccCchhhHHHHHHHHHhccCCCCCeeeEEeEEec
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLS--RRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAE 170 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 170 (441)
......|...+.||+|+||.|+.+.+..++.. ||||++. -......++..+|+.+|+.++|+||+.+++++..
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~-----VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p 92 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEK-----VAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRP 92 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCE-----eehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccc
Confidence 34456677788999999999999999888754 9999998 3444556888999999999999999999999877
Q ss_pred c-ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 171 D-DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 171 ~-~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
+ .......|+|+|+| +.+|...++. +..++...+..+++|++.||.|+|+. +|+||||||.|+|++.+..+||
T Consensus 93 ~~~~~f~DvYiV~elM-etDL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI 166 (359)
T KOG0660|consen 93 PSRDKFNDVYLVFELM-ETDLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKI 166 (359)
T ss_pred ccccccceeEEehhHH-hhHHHHHHHc--CccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEe
Confidence 2 22233569999999 7799999976 45699999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccc-cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
+|||+|+...........+.++-|.+|.|||++. ...|+.+.||||.|||+.||++|++-|.+........++....+.
T Consensus 167 ~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGt 246 (359)
T KOG0660|consen 167 CDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGT 246 (359)
T ss_pred ccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCC
Confidence 9999999875432233446789999999999764 567999999999999999999999999877655544443322221
Q ss_pred cccc----------cchhhhcCCCCCCcch---HHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHh
Q 013504 329 LTDA----------KKFTMILDPKLEGKYS---IKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVD 385 (441)
Q Consensus 329 ~~~~----------~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 385 (441)
..+. ..+...+.......+. ++..+...+|+.+||..||.+|+|++|+++ .|....+
T Consensus 247 P~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd 318 (359)
T KOG0660|consen 247 PSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD 318 (359)
T ss_pred CCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence 1110 0000001111111111 145577889999999999999999999998 3555443
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=347.82 Aligned_cols=249 Identities=28% Similarity=0.440 Sum_probs=210.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
..|...++||+|.||.||+|.+..+.+. ||+|++...... ....+.+|+.+|..++++||.++|+.+.....
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~-----vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~-- 85 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKV-----VAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK-- 85 (467)
T ss_pred cccccchhccccccceeeeeeeccccce-----EEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc--
Confidence 4567778899999999999998887765 999999876543 35678899999999999999999999887664
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
++++||||.||++.+.|.. +..+++..+..++++++.||.|||.+ +.+|||||+.|||+..+|.+||+|||++
T Consensus 86 --LwiiMey~~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 86 --LWIIMEYCGGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred --HHHHHHHhcCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 4899999999999999976 45668889999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... ....+++|||.|||||++.+..|+.++||||||++.+||++|.+|+....+....
T Consensus 159 ~ql~~~~--~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl---------------- 220 (467)
T KOG0201|consen 159 GQLTNTV--KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL---------------- 220 (467)
T ss_pred eeeechh--hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE----------------
Confidence 8765543 2347899999999999999889999999999999999999999999765442111
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
-++.......+...+++.+++++..||.+||+.||++.++++
T Consensus 221 -flIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 221 -FLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -EeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111111222333467888999999999999999999999998
No 36
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.1e-43 Score=342.31 Aligned_cols=268 Identities=26% Similarity=0.452 Sum_probs=205.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCC-----------cccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeE
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTED-----------SHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKL 164 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l 164 (441)
++|.+.+.||+|+||.||+|.+..... ......||+|.+...... ....+.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578899999999999999998755331 123346999998764332 34578899999999999999999
Q ss_pred EeEEeccccCCeeEEEEEeccCCCChHHHHhhcC-----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 013504 165 IGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF-----------------QATLPWNTRLKIAQDAARGLAYLHEGMDF 227 (441)
Q Consensus 165 ~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 227 (441)
++++...+. .++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.
T Consensus 85 ~~~~~~~~~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~--- 157 (304)
T cd05096 85 LGVCVDEDP----LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL--- 157 (304)
T ss_pred EEEEecCCc----eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---
Confidence 999987654 499999999999999986421 12467888999999999999999998
Q ss_pred CeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh--
Q 013504 228 QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-- 305 (441)
Q Consensus 228 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-- 305 (441)
+|+||||||+|||++.++.+||+|||+++...............++..|+|||++.++.++.++|||||||++|||++
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999999999999999999999986543322222334456889999999988899999999999999999987
Q ss_pred CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 306 GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 306 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
|..||....... ............... .....+..++..+.+++.+||+.+|++||++.+|.+.|+
T Consensus 238 ~~~p~~~~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 238 KEQPYGELTDEQ---VIENAGEFFRDQGRQ-------VYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCCCcCCHHH---HHHHHHHHhhhcccc-------ccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 567776543222 222111111110000 000112235678999999999999999999999998875
No 37
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-43 Score=337.53 Aligned_cols=262 Identities=26% Similarity=0.481 Sum_probs=211.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||+|.+...........|++|.+...... ....+.+|+.++..++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~-- 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP-- 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc--
Confidence 468888999999999999999876654445567999998754432 24568899999999999999999999876553
Q ss_pred eeEEEEEeccCCCChHHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQ--------------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL 241 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl 241 (441)
.+++|||+++|+|.+++..... ..+++..++.++.|++.||.|||++ +++||||||+||++
T Consensus 83 --~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~ 157 (283)
T cd05048 83 --TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLV 157 (283)
T ss_pred --eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEE
Confidence 4899999999999999975321 4578899999999999999999998 99999999999999
Q ss_pred cCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHH
Q 013504 242 DEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQK 320 (441)
Q Consensus 242 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~ 320 (441)
++++.++|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--- 234 (283)
T cd05048 158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--- 234 (283)
T ss_pred cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999986543332223344567889999999988899999999999999999998 999997654332
Q ss_pred HHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 321 LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
....+... .....+..++..+.+|+.+||+.||.+||++.+|++.|++
T Consensus 235 ~~~~i~~~--------------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 VIEMIRSR--------------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcC--------------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 22211110 0112234567889999999999999999999999999875
No 38
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.7e-44 Score=347.85 Aligned_cols=245 Identities=25% Similarity=0.426 Sum_probs=201.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||+|.+..++.. ||+|.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 91 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEY-----YAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN- 91 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCE-----EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-
Confidence 5799999999999999999998876653 99999875432 23456789999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 92 ---~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 92 ---RVYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred ---EEEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 35999999999999999976 46789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......... ..+..
T Consensus 164 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~i~~------ 229 (329)
T PTZ00263 164 FAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY---EKILA------ 229 (329)
T ss_pred CceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH---HHHhc------
Confidence 99865432 22467999999999999999999999999999999999999999754432211 11110
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
.. ..++..++..+.+++.+||+.||.+||+ +.+++.
T Consensus 230 -------~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 230 -------GR--LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -------CC--cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00 0111224567889999999999999997 677775
No 39
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.4e-44 Score=346.26 Aligned_cols=242 Identities=27% Similarity=0.433 Sum_probs=197.5
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
++||+|+||.||+|.+..++.. ||+|++..... .....+.+|+.+++.++||||+++++++...+ ..|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~~~ 71 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKY-----YAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD----RLC 71 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC----EEE
Confidence 3699999999999998776653 99999875432 22356778999999999999999999988765 459
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 72 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 72 FVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 99999999999999976 46789999999999999999999998 99999999999999999999999999998543
Q ss_pred CCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
... ......+||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+.. .
T Consensus 147 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~~~~---~-------- 210 (323)
T cd05571 147 SDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFELILM---E-------- 210 (323)
T ss_pred cCC--CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHHHHc---C--------
Confidence 221 12345689999999999999999999999999999999999999996543221 1111110 0
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
...++..++..+.+++.+||+.||++|| ++.++++
T Consensus 211 ----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 211 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 0112234567889999999999999999 7888886
No 40
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.6e-43 Score=352.84 Aligned_cols=267 Identities=23% Similarity=0.379 Sum_probs=210.6
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCC-CCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.++||+|+||.||+|++...........||||++...... ....+.+|+.+|.++. ||||+++++++.....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 4688999999999999999999866554444556999999754432 2456889999999995 9999999999977653
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC-------------------------------------------------------
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF------------------------------------------------------- 198 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------- 198 (441)
.|||||||++|+|.+++....
T Consensus 116 ----~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 116 ----IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred ----eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 599999999999999886421
Q ss_pred ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcE
Q 013504 199 ---------------------------------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNI 239 (441)
Q Consensus 199 ---------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NI 239 (441)
...+++..++.++.||+.||.|||+. +|+||||||+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Ni 268 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhE
Confidence 12477888899999999999999998 999999999999
Q ss_pred EEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhH
Q 013504 240 LLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSE 318 (441)
Q Consensus 240 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~ 318 (441)
|++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 999999999999999986543322222233457788999999998899999999999999999997 9999965422111
Q ss_pred HHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 319 QKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
....+.. . .....+..++..+.+++.+||..+|++||++.+|.+.|+.++.
T Consensus 349 --~~~~~~~----~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 --FYNKIKS----G----------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred --HHHHHhc----C----------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111110 0 0111223456789999999999999999999999999998753
No 41
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.7e-44 Score=342.94 Aligned_cols=245 Identities=27% Similarity=0.385 Sum_probs=200.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|.+..++.. ||+|++..... .....+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHY-----YALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR- 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCE-----EEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC-
Confidence 3688999999999999999998766553 99999865432 23456788999999999999999998887655
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 75 ---FLYMLMEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred ---eEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 45999999999999999976 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...
T Consensus 147 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-------- 213 (291)
T cd05612 147 FAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-------- 213 (291)
T ss_pred cchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------
Confidence 99865332 23457999999999999989999999999999999999999999765432211111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
. ..++..++..+.+++.+||+.||.+||+ ++++++
T Consensus 214 --------~--~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 214 --------K--LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred --------C--cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 0 0122234567899999999999999995 777776
No 42
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-44 Score=348.00 Aligned_cols=253 Identities=25% Similarity=0.404 Sum_probs=216.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|..++.+|+|+||.++.+.++.... .+++|.+....... .....+|+.++++++|||||.+.+.|.+++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~-----~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~- 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDK-----LYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ- 77 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCc-----eEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCc-
Confidence 578899999999999999998877655 38999887655332 3467899999999999999999999988774
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++|||+||+||+|.+.|....+..++++.+..++.|++.|+.|||++ +|+|||||+.|||++.++.|||+|||+
T Consensus 78 --~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 78 --LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred --eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhh
Confidence 259999999999999999887778999999999999999999999988 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
|+...... ....+.+||+.||.||++.+.+|+.++|||||||++|||++-+++|...+.. .++..+.+.
T Consensus 153 aK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~ki~~~------ 221 (426)
T KOG0589|consen 153 AKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELILKINRG------ 221 (426)
T ss_pred hhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHHHHhhc------
Confidence 99876653 2456789999999999999999999999999999999999999999765432 222222111
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.....+..++.++..++..||..+|+.||++.++|..
T Consensus 222 --------~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 --------LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --------cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1223455788899999999999999999999999985
No 43
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.1e-43 Score=335.63 Aligned_cols=266 Identities=26% Similarity=0.452 Sum_probs=214.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|.+.+.||+|+||.||+|.+...........+++|.+........+.+.+|+.++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP--- 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc---
Confidence 46888899999999999999876654444555689999876665555778899999999999999999999987653
Q ss_pred eEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~ 242 (441)
.++||||+++++|.+++.... ...+++..++.++.||+.||.|||++ +|+||||||+|||++
T Consensus 82 -~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~ 157 (291)
T cd05094 82 -LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG 157 (291)
T ss_pred -eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc
Confidence 499999999999999996532 23488999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 013504 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKL 321 (441)
Q Consensus 243 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~ 321 (441)
.++.++|+|||++................++..|+|||++.+..++.++|||||||++|||++ |..||....... .
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~ 234 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---V 234 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---H
Confidence 999999999999986544322222334567889999999998899999999999999999999 999996554322 1
Q ss_pred HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 322 LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
.+...... ....+..++..+.+++.+||+.+|++||++.+|+++|+++...
T Consensus 235 ~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 235 IECITQGR--------------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHhCCC--------------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11111100 0011123456789999999999999999999999999998653
No 44
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.6e-43 Score=345.78 Aligned_cols=254 Identities=25% Similarity=0.409 Sum_probs=205.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|.+..++.. ||+|++..... .....+.+|+.++..++||||+++++++...+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~- 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEI-----VALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE- 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCE-----EEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-
Confidence 3689999999999999999998876553 99999875432 23456788999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 75 ---YLYLAMEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred ---EEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 45999999999999999975 45789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++.... ......||+.|+|||++.+..++.++|||||||++|||++|..||...........+......+.
T Consensus 147 ~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--- 218 (333)
T cd05600 147 LSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ--- 218 (333)
T ss_pred CCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc---
Confidence 9986433 23456899999999999999999999999999999999999999976544332221111000000
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.+. .......++..+.+++.+||..+|.+||++.+++..
T Consensus 219 ------~~~-~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 ------RPV-YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ------CCC-CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000 000012456788999999999999999999999974
No 45
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=332.40 Aligned_cols=274 Identities=25% Similarity=0.375 Sum_probs=211.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC-C
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER-G 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~-~ 175 (441)
-.|...+++|+|+||.||+|+...+++. ||||++..... .--+|+.+|+.+.|||||++.-+|...... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~-----vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEE-----VAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCce-----eEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence 4577788999999999999999888554 99998865432 223799999999999999999988776554 3
Q ss_pred eeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-CcEEEeec
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-WNAKLSDF 252 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DF 252 (441)
....|||||++. +|.+.++.. .+..++.-.+.-+.+||.+||.|||+. +|+||||||+|+|+|.+ |.+|||||
T Consensus 95 ~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDF 170 (364)
T KOG0658|consen 95 VYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDF 170 (364)
T ss_pred hHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccC
Confidence 456789999965 999998742 356788888999999999999999997 99999999999999876 89999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
|.|+.....+ ...++..|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|.+....+....+-.+......
T Consensus 171 GSAK~L~~~e---pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 171 GSAKVLVKGE---PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTR 247 (364)
T ss_pred CcceeeccCC---CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCH
Confidence 9999876543 2356788999999998877 56999999999999999999999999876655444333222111111
Q ss_pred cc------chhhhcCCCCC-----CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHhh
Q 013504 332 AK------KFTMILDPKLE-----GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVDA 386 (441)
Q Consensus 332 ~~------~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~ 386 (441)
.. .......|.+. ..+....++++.+|+.++|..+|.+|.++.+++. .++.+.+.
T Consensus 248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 00 00011112221 1234456788999999999999999999999987 56666554
No 46
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-43 Score=343.72 Aligned_cols=264 Identities=26% Similarity=0.371 Sum_probs=205.3
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|++.+.||+|+||.||++.+..++.. +|+|.+..... .....+.+|+.+|+.++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-----~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 76 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLI-----MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-- 76 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcE-----EEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--
Confidence 36899999999999999999998876643 88998875432 23467889999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ .+|+||||||+|||++.++.+||+|||+
T Consensus 77 --~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 77 --EISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred --EEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 35999999999999999976 35789999999999999999999975 2699999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc-c
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA-K 333 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~-~ 333 (441)
++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............. ....+. .
T Consensus 151 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~~ 223 (331)
T cd06649 151 SGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFG---RPVVDGEE 223 (331)
T ss_pred ccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc---cccccccc
Confidence 9765332 2234679999999999999999999999999999999999999996543322211111 000000 0
Q ss_pred --------------------------------chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 334 --------------------------------KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 334 --------------------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
....+............++.++.+|+.+||+.||++||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000011112356789999999999999999999999984
No 47
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.9e-43 Score=345.56 Aligned_cols=267 Identities=27% Similarity=0.409 Sum_probs=210.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|...+++.......||+|++..... ...+.+.+|+.++.++ +||||++++++|...+.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~- 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG- 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC-
Confidence 57999999999999999999876655444556799999875432 2345678899999999 89999999998875543
Q ss_pred CeeEEEEEeccCCCChHHHHhhcC--------------------------------------------------------
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRF-------------------------------------------------------- 198 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~-------------------------------------------------------- 198 (441)
..+++|||+++++|.+++....
T Consensus 86 --~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 86 --PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred --CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 3589999999999999986422
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccC
Q 013504 199 ---QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIG 275 (441)
Q Consensus 199 ---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~ 275 (441)
...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.++|+|||+++...............++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12688999999999999999999998 999999999999999999999999999987543322222334556788
Q ss_pred cCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHH
Q 013504 276 YAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQK 354 (441)
Q Consensus 276 y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (441)
|+|||++.+..++.++|||||||++|||++ |..||........ ....+ .... ....+...+..
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--~~~~~----~~~~----------~~~~~~~~~~~ 304 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--FCRRL----KEGT----------RMRAPEYATPE 304 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--HHHHH----hccC----------CCCCCccCCHH
Confidence 999999999999999999999999999998 9999965432211 11111 0000 00111234567
Q ss_pred HHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 355 LAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 355 l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
+.+++.+||+.+|++||++.+|++.|+.++.
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8999999999999999999999999999875
No 48
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.4e-43 Score=338.55 Aligned_cols=264 Identities=27% Similarity=0.459 Sum_probs=209.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|+..+.||+|+||.||+|.+..++.. ....||+|.+..... ....++.+|+.+++.++||||+++++++....
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~--- 82 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEK-VKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 82 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCc-cceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC---
Confidence 5799999999999999999998665432 234589999875432 33467889999999999999999999997643
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++|+||+++|+|.+++... ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 83 --~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a 156 (316)
T cd05108 83 --VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (316)
T ss_pred --ceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccc
Confidence 37999999999999999764 34688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+...............++..|+|||++.+..++.++|||||||++|||++ |..||............. . ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~---~----~~- 228 (316)
T cd05108 157 KLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---K----GE- 228 (316)
T ss_pred ccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh---C----CC-
Confidence 87654332222223345678999999999999999999999999999998 999997543322111111 0 00
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
....+..++..+.+++.+||..+|.+||++.+++..|..+....
T Consensus 229 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 229 ---------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 00111234467889999999999999999999999999887543
No 49
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.4e-43 Score=336.93 Aligned_cols=267 Identities=21% Similarity=0.294 Sum_probs=202.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|.+..++.. +|+|++..... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEI-----VAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-- 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcE-----EEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC--
Confidence 4689999999999999999998876653 89998875432 22456788999999999999999999997765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||++++.|..+... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 --~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 74 --KLYLVFEYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred --EEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 35999999998777655433 45789999999999999999999988 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc---
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD--- 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--- 331 (441)
++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......+..
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07848 147 ARNLSEGS-NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQM 225 (287)
T ss_pred cccccccc-cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHH
Confidence 98654322 11223467899999999999889999999999999999999999999765433322211111110000
Q ss_pred -----ccchhhhcCCCC------CCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 -----AKKFTMILDPKL------EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 -----~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.........+.. .......++..+.+++.+||+.||++||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000000 01112235678999999999999999999999885
No 50
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-43 Score=323.34 Aligned_cols=269 Identities=24% Similarity=0.326 Sum_probs=210.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.++|+..+.|++|+||.||+|++..++.. ||+|+++...... .-..++|+.+|.+++|||||.+-.+....+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eI-----VALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEI-----VALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCccee-----EEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 45688888999999999999999888775 9999998654221 1235799999999999999999999887765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. ..|||||||+ .+|...+... ..+|...++.-++.|++.||+|||.+ .|+||||||+|+|++..|.+||+|||
T Consensus 150 d--~iy~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 150 D--KIYIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred c--eeeeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 5 3599999995 4888888765 46899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh-------
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV------- 325 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~------- 325 (441)
+||.+.... ...+..+-|.+|.|||++.+. .|+..+|+||+|||+.||+++++-|.+....+..+.+-..
T Consensus 223 LAR~ygsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 223 LAREYGSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred hhhhhcCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 999876652 235567889999999998874 5999999999999999999999999876654443332211
Q ss_pred -hhhcccccchh-----hhcCCCCCCcchHH-HHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 326 -RPHLTDAKKFT-----MILDPKLEGKYSIK-LAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 326 -~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
++.+....... ......++..+... .++.-.+|+..+|..||.+|.|+++.|+
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11111111000 00001111122212 5577889999999999999999999987
No 51
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=347.94 Aligned_cols=241 Identities=25% Similarity=0.436 Sum_probs=203.2
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEE
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~l 180 (441)
..+-||+|+.|.||+|++++.. ||||+++... ..+|.-|++|+||||+.+.|+|.... .+||
T Consensus 128 ELeWlGSGaQGAVF~Grl~net-------VAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsP----cyCI 189 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLHNET-------VAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSP----CYCI 189 (904)
T ss_pred hhhhhccCcccceeeeeccCce-------ehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCc----eeEE
Confidence 3456999999999999987654 9999875322 26888999999999999999998655 4599
Q ss_pred EEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 181 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
|||||..|-|++.|+. +..+.......+..+||.|+.|||.+ .|||||||.-||||..+..|||+|||.++....
T Consensus 190 iMEfCa~GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred eeeccccccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 9999999999999976 57888899999999999999999998 999999999999999999999999999986543
Q ss_pred CCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcC
Q 013504 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD 340 (441)
Q Consensus 261 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (441)
. .....++||..|||||++...+.+.|+|||||||+|||||||..||.+.... ..+..+-.
T Consensus 265 ~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----------------AIIwGVGs 325 (904)
T KOG4721|consen 265 K---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----------------AIIWGVGS 325 (904)
T ss_pred h---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----------------eeEEeccC
Confidence 2 2345689999999999999999999999999999999999999999543211 01111122
Q ss_pred CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 341 PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 341 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
..+.-..+..+++.+.-|+++||...|.+||++.+|+..|+-.
T Consensus 326 NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 326 NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 3344456678899999999999999999999999999988643
No 52
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=359.90 Aligned_cols=265 Identities=25% Similarity=0.342 Sum_probs=216.6
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-CCCeeeEEeE-Eecc-c
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-HPNLVKLIGY-CAED-D 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~-~~~~-~ 172 (441)
..++.+.+.|.+|||+.||+|.....+ ..+|+|++-..+....+.+.+||.+|++|+ |+|||.|++. .... .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~-----~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGG-----KKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCC-----ceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 357888899999999999999987764 349999998877777888999999999995 9999999993 3322 2
Q ss_pred cC-CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 173 ER-GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 173 ~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
.. ....+|+||||.||.|-+++..+.+..|++.++++|++++++|+.+||.. .++|||||||-+||||+.+|..||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 22 35678999999999999999988888899999999999999999999986 67899999999999999999999999
Q ss_pred cCCCCCCCCCC-Ccce------eeceecccCcCCcccc---ccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH
Q 013504 252 FGLARLGPSDG-LSHV------STAVVGTIGYAAPEYI---QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL 321 (441)
Q Consensus 252 FGla~~~~~~~-~~~~------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~ 321 (441)
||.+......- .... .-...-|+.|++||++ .+.+.+.|+|||+|||+||-|+....||+....
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------ 263 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------ 263 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc------
Confidence 99987432211 0000 0123468999999987 467889999999999999999999999975421
Q ss_pred HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 322 LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
..+++....-...+.++..+.+||..||+.||.+||++-+|+..+..+...
T Consensus 264 --------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 264 --------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred --------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 112333333333357899999999999999999999999999999887643
No 53
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-44 Score=334.91 Aligned_cols=248 Identities=20% Similarity=0.419 Sum_probs=208.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
..+|++.+.||+|+||.|-+|.....+. .||||.+++....+ .-.+.+|++||..|+||||+.+|.+|...+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR-----~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGR-----EVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCc-----EeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc
Confidence 3578888899999999999998765554 49999998766544 345779999999999999999999999877
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
. .+|||||..+|.|++|+.. .+.+++.++..+++||..|+.|+|++ +++|||||.+|||||.|+++||+||
T Consensus 127 K----IvivMEYaS~GeLYDYiSe--r~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADF 197 (668)
T KOG0611|consen 127 K----IVIVMEYASGGELYDYISE--RGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADF 197 (668)
T ss_pred e----EEEEEEecCCccHHHHHHH--hccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeecc
Confidence 5 4999999999999999987 47899999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCC-ccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
|++.++... ...++++|+|.|.+||++.+.+|. +.+|-|||||+||-|+.|..||++... ..++..+..
T Consensus 198 GLSNly~~~---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lvrQIs~---- 267 (668)
T KOG0611|consen 198 GLSNLYADK---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLVRQISR---- 267 (668)
T ss_pred chhhhhccc---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHHHHhhc----
Confidence 999876554 346789999999999999999884 789999999999999999999986543 222222211
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
+ .+ ..+..+....-||++||..+|++|.|+.+|...
T Consensus 268 G-aY-----------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 268 G-AY-----------REPETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred c-cc-----------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 0 00 011233456789999999999999999999874
No 54
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1e-42 Score=333.11 Aligned_cols=266 Identities=27% Similarity=0.445 Sum_probs=211.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||++.............+|+|.+..........+.+|+.++.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP--- 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc---
Confidence 57889999999999999999865533333445689999876654556678999999999999999999999987653
Q ss_pred eEEEEEeccCCCChHHHHhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRF-----------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
.++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+|||+++++
T Consensus 82 -~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 82 -LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred -cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 499999999999999986431 13589999999999999999999998 999999999999999999
Q ss_pred cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHh
Q 013504 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~ 324 (441)
.++|+|||+++...............++..|+|||++.+..++.++|||||||++|+|++ |..||....... ....
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~ 234 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIEC 234 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH
Confidence 999999999986543322222233456788999999998899999999999999999998 899996554322 1111
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
+.... . . ..+..++..+.+++.+||+.+|.+||++.+++..|+++...
T Consensus 235 i~~~~----~------~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGR----V------L----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCC----c------C----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 11100 0 0 01112456799999999999999999999999999998754
No 55
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.6e-43 Score=329.69 Aligned_cols=259 Identities=22% Similarity=0.416 Sum_probs=206.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||+|.+.... .....||+|.+...... ....+.+|+.++.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~--~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 80 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPS--KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT-- 80 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCC--CceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC--
Confidence 57899999999999999999875432 13346999998765332 23568899999999999999999999987654
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++|+|.+++... ...+++..++.++.|++.||.|||++ +++||||||+|||++.++.++++|||.+
T Consensus 81 --~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 81 --MMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred --cEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccc
Confidence 49999999999999999754 35789999999999999999999998 9999999999999999999999999987
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
....... ........++..|+|||.+.+..++.++|||||||++||+++ |..||........ ...+.. ..
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~---~~~~~~----~~- 225 (266)
T cd05064 155 QEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV---IKAVED----GF- 225 (266)
T ss_pred ccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHHHHC----CC-
Confidence 6542221 111122345678999999999999999999999999999875 9999976543322 111110 00
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
....+..++..+.+++.+||+.+|.+||++.+|++.|.++
T Consensus 226 ---------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 ---------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0112234667899999999999999999999999998765
No 56
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.3e-43 Score=333.15 Aligned_cols=261 Identities=27% Similarity=0.446 Sum_probs=209.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|.+.+.||+|+||.||+|.+...........||+|.+...... ..+.+.+|+.+|+.++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-- 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP-- 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC--
Confidence 568888899999999999998866533344556999998765444 34678899999999999999999999987653
Q ss_pred eeEEEEEeccCCCChHHHHhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~ 243 (441)
.++||||+++++|.+++.... ...+++..+..++.|++.||.|||++ +++||||||+||+++.
T Consensus 83 --~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~ 157 (280)
T cd05049 83 --PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY 157 (280)
T ss_pred --eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC
Confidence 599999999999999997532 24578899999999999999999998 9999999999999999
Q ss_pred CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHH
Q 013504 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 244 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~ 322 (441)
++.++|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||........ .
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~---~ 234 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV---I 234 (280)
T ss_pred CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---H
Confidence 99999999999986433322222334456789999999999999999999999999999998 9999965443222 2
Q ss_pred HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
..+... . ....+..++..+.+++.+||+.||++||++.+|++.|+
T Consensus 235 ~~~~~~-----~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 ECITQG-----R---------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHcC-----C---------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 211100 0 00112245678999999999999999999999999885
No 57
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-43 Score=348.81 Aligned_cols=265 Identities=29% Similarity=0.498 Sum_probs=214.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC---chhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG---LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++-...++||+|+||.||+|.+......... .||||...... .....++++|.++|+.++|||||++||++.....
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~-~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVV-PVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceee-eeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 4455567999999999999999876542222 28999988522 3456789999999999999999999999988876
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. +||||+|+||+|.++|... ...++..+.+.++.+.+.||+|||++ ++|||||..+|+|++.++.+||+|||
T Consensus 236 l----~ivmEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 236 L----MLVMELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred c----EEEEEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccc
Confidence 5 9999999999999999875 34799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
+++....... ......-...|+|||.+..+.|+.++|||||||++||+++ |..||.+.........+. .
T Consensus 308 Ls~~~~~~~~--~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~--~------ 377 (474)
T KOG0194|consen 308 LSRAGSQYVM--KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV--K------ 377 (474)
T ss_pred cccCCcceee--ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH--h------
Confidence 9987542111 1112235678999999999999999999999999999999 888997765443222210 0
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhhc
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAAE 388 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 388 (441)
.......+...+..+..++.+||..+|++||+|.++.+.|+.+.....
T Consensus 378 --------~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 378 --------NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred --------cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 011112223556788899999999999999999999999999886654
No 58
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.4e-43 Score=340.35 Aligned_cols=240 Identities=26% Similarity=0.384 Sum_probs=193.7
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccC---chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG---LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||+|+||.||+|.+..++. .||+|.+.... ......+.+|+.++.+++||||+++++++...+ ..|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 71 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQR-----IYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE----KLYLV 71 (312)
T ss_pred CCcCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC----eEEEE
Confidence 7999999999999877654 39999986532 223456778999999999999999999987665 45999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 72 ~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 72 LAFINGGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred EcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 999999999999976 45789999999999999999999998 9999999999999999999999999999854322
Q ss_pred CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
. .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+ ...
T Consensus 147 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~---~~~~~---~~~---------- 208 (312)
T cd05585 147 D--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE---MYRKI---LQE---------- 208 (312)
T ss_pred C--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH---HHHHH---HcC----------
Confidence 1 12345679999999999999999999999999999999999999997543221 11111 000
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCC---HHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPK---MSEVVE 378 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 378 (441)
...++..++..+.+++.+||..||.+||+ +.+++.
T Consensus 209 --~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 209 --PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred --CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 01122345678899999999999999986 455554
No 59
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.7e-42 Score=331.73 Aligned_cols=264 Identities=27% Similarity=0.440 Sum_probs=209.0
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+|++.+.||+|+||.||+|.............+++|.+..... .....+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL-- 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc--
Confidence 4778889999999999999876544333445689998875443 2346788999999999999999999998876643
Q ss_pred eEEEEEeccCCCChHHHHhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRF----------------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 234 (441)
++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||
T Consensus 79 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~di 153 (290)
T cd05045 79 --LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDL 153 (290)
T ss_pred --EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhh
Confidence 99999999999999986421 13578899999999999999999988 9999999
Q ss_pred CCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 013504 235 KSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRN 313 (441)
Q Consensus 235 Kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~ 313 (441)
||+|||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 154 kp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 154 AARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred hhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999986533322112233456778999999988889999999999999999998 99999654
Q ss_pred CchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 314 RPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
.+.. +.+...... ....+..++..+.+++.+||+.+|++||++.++++.|++++.
T Consensus 234 ~~~~---~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 234 APER---LFNLLKTGY--------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CHHH---HHHHHhCCC--------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 4322 222211110 111122355678999999999999999999999999999875
No 60
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.8e-43 Score=343.77 Aligned_cols=247 Identities=23% Similarity=0.374 Sum_probs=201.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||+|.+..+.. ..||+|.+..... .....+.+|+.++..++||||+++++++.+..
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~- 104 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDF----PPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES- 104 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCC----eEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC-
Confidence 579999999999999999998765432 2499998865322 23456788999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 105 ---~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG 176 (340)
T PTZ00426 105 ---YLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFG 176 (340)
T ss_pred ---EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCC
Confidence 45999999999999999976 46789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|..||........... +..
T Consensus 177 ~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~---i~~------ 242 (340)
T PTZ00426 177 FAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK---ILE------ 242 (340)
T ss_pred CCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH---Hhc------
Confidence 99865332 2346899999999999988899999999999999999999999976543221111 100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVEV 379 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 379 (441)
.. ..++..++..+.+++.+||+.||++|+ +++++++.
T Consensus 243 -------~~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 243 -------GI--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -------CC--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 00 011223456788999999999999995 88888773
No 61
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=5.1e-43 Score=341.44 Aligned_cols=243 Identities=25% Similarity=0.416 Sum_probs=197.1
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
+.||+|+||.||++....++.. ||+|++..... .....+.+|+.+++.++||||+++++++...+ ..|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~~~ 71 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKY-----YAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD----RLC 71 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC----EEE
Confidence 3699999999999998776553 99999875432 23456788999999999999999999988766 359
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+||||+++|+|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 72 lv~Ey~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 72 FVMEYVNGGELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred EEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 99999999999999865 45789999999999999999999998 99999999999999999999999999988543
Q ss_pred CCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+. ..
T Consensus 147 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~------~~-------- 210 (328)
T cd05593 147 TDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL------ME-------- 210 (328)
T ss_pred Ccc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc------cC--------
Confidence 221 12234679999999999999999999999999999999999999996543322111110 00
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVEV 379 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 379 (441)
...++..++..+.+++.+||..||++|| ++.++++.
T Consensus 211 ----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 211 ----DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ----CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0112234567789999999999999997 89998863
No 62
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.4e-43 Score=355.92 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=203.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
.|.+.+.||+|+||.||+|....+.. ..|++|.+..........+.+|+.+|+.++||||+++++++...+ .
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~----~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~----~ 139 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPK----EKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD----K 139 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCC----eEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC----E
Confidence 48889999999999999998765521 237888775554444556778999999999999999999998765 4
Q ss_pred EEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.||||||+++|+|.+++... ...++++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla 216 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFS 216 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCc
Confidence 59999999999999988643 235688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
+..............+||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+.. .
T Consensus 217 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~~~~~~---~---- 286 (478)
T PTZ00267 217 KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IMQQVLY---G---- 286 (478)
T ss_pred eecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHh---C----
Confidence 86543322223445679999999999999999999999999999999999999997543221 1111100 0
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ....+..++..+.+++.+||..+|++||++.+++.
T Consensus 287 ------~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 287 ------K-YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------C-CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0 00112245578999999999999999999999875
No 63
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.7e-42 Score=327.03 Aligned_cols=256 Identities=26% Similarity=0.463 Sum_probs=207.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|.+.+.||+|+||.||+|.+...+.. |++|.+.... .....+.+|+.+++.++||||+++++++...+.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~-----~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 76 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLT-----VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--- 76 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCce-----EEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCC---
Confidence 4588889999999999999998765543 9999886543 345678899999999999999999999887654
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++++|.+++.......+++..++.++.|++.||.|||++ +++||||||+|||+++++.+||+|||++.
T Consensus 77 -~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 77 -FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred -cEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 48999999999999999765556789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ........
T Consensus 153 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~~~~------- 221 (263)
T cd05052 153 LMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKG------- 221 (263)
T ss_pred ccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCC-------
Confidence 65432211 1112334678999999998999999999999999999998 999997543222 11111110
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
.....+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 222 -------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 -------YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 01112234567899999999999999999999999999875
No 64
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.3e-43 Score=334.16 Aligned_cols=266 Identities=24% Similarity=0.386 Sum_probs=201.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|.+.+.||.|+||.||+|....++.. ||+|.+...... ....+.+|+.+++.++||||+++++++....
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 76 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENL-----VALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER--- 76 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCE-----EEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC---
Confidence 5799999999999999999998776653 999988754322 2346778999999999999999999987655
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++ +|.+++... +..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 77 -~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 77 -CLTLVFEYLDS-DLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred -eEEEEEeCCCc-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 35999999974 999988653 34688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh-------
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP------- 327 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~------- 327 (441)
+...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+.....
T Consensus 151 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07871 151 RAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228 (288)
T ss_pred eeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence 7543221 12234578999999998865 5689999999999999999999999976554333222211100
Q ss_pred -hcccccchhhhcCCCCCCc----chHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 -HLTDAKKFTMILDPKLEGK----YSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 -~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.......+.....+..... .....+.++.+++.+||..||.+|||++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000111111111111100 01124567889999999999999999999985
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.3e-43 Score=340.64 Aligned_cols=242 Identities=27% Similarity=0.419 Sum_probs=196.2
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
+.||+|+||.||++....++.. ||+|.+..... .....+.+|+.+++.++||||+++++++...+ ..|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~----~~~ 71 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRY-----YAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----RLC 71 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCE-----EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC----EEE
Confidence 3699999999999998766553 99999875422 23345678999999999999999999998765 459
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+||||+++|+|..++.. ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 72 lv~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 72 FVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 99999999999998865 45789999999999999999999998 99999999999999999999999999987533
Q ss_pred CCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
... .......||+.|+|||++.+..++.++|||||||++|||++|..||...........+.. .
T Consensus 147 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~------~-------- 210 (323)
T cd05595 147 SDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM------E-------- 210 (323)
T ss_pred CCC--CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc------C--------
Confidence 221 122346799999999999999999999999999999999999999975443221111110 0
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
...++..+++.+.+++.+||+.||.+|| ++.++++
T Consensus 211 ----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 211 ----EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred ----CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 0012234567889999999999999998 8888876
No 66
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3e-42 Score=328.32 Aligned_cols=263 Identities=27% Similarity=0.452 Sum_probs=207.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||+|.+..++.. ....+++|.+..... ....++..|+.++..++||||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~---- 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDS-IKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA---- 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCc-eeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC----
Confidence 4688889999999999999998765443 223478888764432 2345677888899999999999999987532
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++++||+++|+|.+++... ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++
T Consensus 82 -~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~ 156 (279)
T cd05111 82 -SLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVA 156 (279)
T ss_pred -ccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccc
Confidence 247899999999999999754 35789999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+...............++..|+|||.+.++.++.++|||||||++|||++ |..||.........+.+.. ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-------~~~ 229 (279)
T cd05111 157 DLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK-------GER 229 (279)
T ss_pred eeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-------CCc
Confidence 86543332222334567789999999998899999999999999999998 9999976543322222210 000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
.. .+..++..+.+++.+||..+|++||++.++++.|..+.+.
T Consensus 230 ---~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 230 ---LA-------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ---CC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 00 0112345678899999999999999999999999887653
No 67
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.7e-42 Score=329.51 Aligned_cols=263 Identities=23% Similarity=0.414 Sum_probs=205.4
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
..++|++.+.||+|+||.||+|.+.+.........||+|.+..... ....++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999876543333345699998865332 234568899999999999999999999876553
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF--------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+|||+++++
T Consensus 84 ----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~ 156 (277)
T cd05062 84 ----TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 156 (277)
T ss_pred ----eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCC
Confidence 499999999999999986532 12457788999999999999999998 999999999999999999
Q ss_pred cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHh
Q 013504 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~ 324 (441)
.++|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.............
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~- 235 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM- 235 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-
Confidence 999999999986543322222223456788999999998899999999999999999999 788986544322211111
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. ... ...+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 236 --~----~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 236 --E----GGL----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred --c----CCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0 000 0111234567899999999999999999999999875
No 68
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=368.20 Aligned_cols=267 Identities=30% Similarity=0.480 Sum_probs=219.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+....+.||+|.||.||.|...+.........||||.+.+.. .+...+|++|..+|+.++|||||+++|+|.+....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~- 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP- 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc-
Confidence 4456677899999999999999876665557789999998754 34567899999999999999999999999986544
Q ss_pred eeEEEEEeccCCCChHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF-----QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
+|++|||+||+|..||.+.. ...+.....+.++.|||+|+.||+++ ++|||||..+|+||+....+||+
T Consensus 771 ---~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 771 ---LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred ---EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 89999999999999997631 35688899999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|||+|+.....+.........-...|||||.+..+.++.++|||||||++||++| |..||...+..+....+ ..
T Consensus 845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~--~~--- 919 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDV--LE--- 919 (1025)
T ss_pred ccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHH--Hh---
Confidence 9999995444333332222234568999999999999999999999999999999 89999765543332211 11
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
.. +-..+..|+..+.+++..||+.+|++||++..|++.+..+.+..
T Consensus 920 --gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 920 --GG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --CC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 11 12234568889999999999999999999999999999988654
No 69
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6e-43 Score=329.60 Aligned_cols=255 Identities=33% Similarity=0.578 Sum_probs=198.9
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
+.+.||.|.||.||+|.+.. ........|+||.+..... ...+.+.+|+.++++++||||++++|++...+. .+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~----~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP----LF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS----EE
T ss_pred EeeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccc----cc
Confidence 45689999999999999984 2333456799999965433 236789999999999999999999999995443 48
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+||||+++|+|.++|.......+++..++.|+.||+.||.|||++ +++|+||+++|||++.++.+||+|||++....
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~ 154 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS 154 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 999999999999999886567899999999999999999999998 99999999999999999999999999998763
Q ss_pred CCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
............+...|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~~~~~~~----~~---- 223 (259)
T PF07714_consen 155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---IIEKLKQG----QR---- 223 (259)
T ss_dssp TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HHHHHHTT----EE----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccc----cc----
Confidence 3322233344567889999999999899999999999999999999 789986653322 22211111 00
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
...+..++..+.+++..||..+|++||++.++++.|
T Consensus 224 ------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112224567788999999999999999999999876
No 70
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.9e-42 Score=331.77 Aligned_cols=266 Identities=26% Similarity=0.450 Sum_probs=210.9
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
..++|++.+.||+|+||.||+|.+...........+|+|.+..... .....+.+|+.++.++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3467899999999999999999987655434455699999875432 2345688999999999 8999999999997765
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhc--------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCc
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSR--------------FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~N 238 (441)
. .++||||+++|+|.+++..+ ....+++..++.++.|++.||.|||+. +|+||||||+|
T Consensus 90 ~----~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~N 162 (293)
T cd05053 90 P----LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARN 162 (293)
T ss_pred C----eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccceee
Confidence 4 49999999999999999642 235688999999999999999999988 99999999999
Q ss_pred EEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchh
Q 013504 239 ILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKS 317 (441)
Q Consensus 239 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~ 317 (441)
||++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 9999999999999999987554332222223345678999999988899999999999999999998 999986543322
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
...... . . .....+..++..+.+++.+||..+|++||++.++++.|++++
T Consensus 243 ~~~~~~---~----~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLK---E----G----------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHH---c----C----------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111111 0 0 001112234567899999999999999999999999999875
No 71
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.9e-42 Score=333.65 Aligned_cols=265 Identities=25% Similarity=0.412 Sum_probs=209.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.+.||+|+||.||+|.............+|+|.+..... .....+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357999999999999999999875443333455699999876532 2345688999999999 79999999999977654
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.++||||+++|+|.+++.......+++.++..++.|++.||.|||++ +|+|+||||+|||++.++.++|+|||
T Consensus 114 ----~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 114 ----ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ----eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 49999999999999999765445589999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......... .......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~--~~~~~~~---- 260 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF--YKLIKEG---- 260 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH--HHHHHcC----
Confidence 9986543322222233456788999999999899999999999999999998 99999654432211 1111100
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
.....+...+..+.+++.+||..+|++||++.++++.|+++
T Consensus 261 ----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 ----------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00011123456799999999999999999999999999875
No 72
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.5e-42 Score=341.35 Aligned_cols=254 Identities=25% Similarity=0.388 Sum_probs=197.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||+||+|.+..++.. ||+|++..... .....+.+|+.++..++||||+++++.+.+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~- 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHV-----YAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL- 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCE-----EEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-
Confidence 4789999999999999999998776553 99999875432 22346778999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||++||+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 75 ---NLYLIMEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred ---eEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 35999999999999999976 46799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCC---------------------------------cceeeceecccCcCCccccccCCCCccccchhHHHHH
Q 013504 254 LARLGPSDGL---------------------------------SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFL 300 (441)
Q Consensus 254 la~~~~~~~~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il 300 (441)
+++....... .......+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 9875432110 0011245899999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCchhHHHH-HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhc--ccCCCCCCHHHHH
Q 013504 301 YELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLA--RQAKGRPKMSEVV 377 (441)
Q Consensus 301 ~elltG~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl 377 (441)
|||++|..||........... ..+... + .+.+ ...++..+.+++.+++. .++..||++++|+
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~--------~~p~------~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~ 291 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKET-L--------IFPP------EVPISEKAKDLILRFCCEWEHRIGAPGVEEIK 291 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCc-c--------cCCC------cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHh
Confidence 999999999976543322211 111000 0 0000 01244667788887654 2333568999998
Q ss_pred HH
Q 013504 378 EV 379 (441)
Q Consensus 378 ~~ 379 (441)
+.
T Consensus 292 ~h 293 (363)
T cd05628 292 TN 293 (363)
T ss_pred CC
Confidence 84
No 73
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.7e-42 Score=344.71 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=197.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.|..++.||+|+||+||+|.+..++.. ||+|++..... .....+.+|+.+++.++||||+++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~-----~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-- 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHAL-----YAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-- 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCE-----EEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC--
Confidence 588899999999999999998776653 99999876432 22356789999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||||+.++.+||+|||+
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 75 --NLYFVMDYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred --EEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 45999999999999999976 35789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCC---------------------------------------------cceeeceecccCcCCccccccCCCCc
Q 013504 255 ARLGPSDGL---------------------------------------------SHVSTAVVGTIGYAAPEYIQTGRLTY 289 (441)
Q Consensus 255 a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ 289 (441)
++....... .......+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 764211000 00112457999999999999889999
Q ss_pred cccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhh--ccc
Q 013504 290 KSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCL--ARQ 366 (441)
Q Consensus 290 ~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl--~~d 366 (441)
++|||||||++|||++|..||.......... ...|.. .+.......+++++.+++.+|+ ..+
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~~~~~s~~~~dli~~ll~~~~~ 292 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN---------------TLHIPPQVKLSPEAVDLITKLCCSAEE 292 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc---------------ccCCCCCCCCCHHHHHHHHHHccCccc
Confidence 9999999999999999999997654332221 111110 0001111134567888998854 455
Q ss_pred CCCCCCHHHHHH
Q 013504 367 AKGRPKMSEVVE 378 (441)
Q Consensus 367 P~~RPs~~evl~ 378 (441)
|..||++.+++.
T Consensus 293 ~~~R~~~~~~l~ 304 (381)
T cd05626 293 RLGRNGADDIKA 304 (381)
T ss_pred ccCCCCHHHHhc
Confidence 666999999988
No 74
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.7e-42 Score=324.96 Aligned_cols=254 Identities=27% Similarity=0.467 Sum_probs=205.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|++.+.||+|+||.||+|...... .|++|.+.... ...+.+.+|+.+++.++||||+++++++...+.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~------~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 75 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNST------KVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEP--- 75 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCc------eEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC---
Confidence 57999999999999999999865432 38999876543 235678899999999999999999999876654
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++++|.+++.......+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||+++
T Consensus 76 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 76 -IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred -cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccce
Confidence 49999999999999999766567789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......++..|+|||++.+..++.++|||||||++|+|++ |..||......... ..+....
T Consensus 152 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~---~~~~~~~------ 221 (261)
T cd05072 152 VIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM---SALQRGY------ 221 (261)
T ss_pred ecCCCce-eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH---HHHHcCC------
Confidence 6543221 11223456778999999988889999999999999999998 99999654332211 1111100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.. .....++..+.+++.+||..+|++||+++++++.|++
T Consensus 222 ----~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 222 ----RM----PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CC----CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00 0112345678899999999999999999999999985
No 75
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.7e-42 Score=338.88 Aligned_cols=270 Identities=23% Similarity=0.361 Sum_probs=200.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC-
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER- 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~- 174 (441)
+|++.+.||+|+||.||+|.+..++. .||||.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGE-----KVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE 75 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCC-----EEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCC
Confidence 47888999999999999999877655 39999886432 22345688999999999999999999988654322
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
....|+||||+ +++|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 76 FKDIYVVFELM-ESDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred CceEEEEEecC-CCCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcc
Confidence 22469999999 5789999865 35799999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCC-cceeeceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc-
Q 013504 255 ARLGPSDGL-SHVSTAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT- 330 (441)
Q Consensus 255 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~- 330 (441)
++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229 (338)
T ss_pred ccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 985432211 112234679999999999865 6789999999999999999999999976543222111110000000
Q ss_pred -------c--ccchhhhcCCCCCCcch---HHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 -------D--AKKFTMILDPKLEGKYS---IKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 -------~--~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. .......+.+....... ...+..+.+++.+||+.||++||+++++++
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0 00000000000011111 123567889999999999999999999997
No 76
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.9e-43 Score=344.70 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=200.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|.+..++. .||||++..... .....+.+|+.+|..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGH-----IYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN- 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-
Confidence 479999999999999999999887665 399999875432 22345778999999999999999999998766
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 75 ---YLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred ---eEEEEECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 35999999999999999976 35799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCc------------------------------------ceeeceecccCcCCccccccCCCCccccchhHH
Q 013504 254 LARLGPSDGLS------------------------------------HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFG 297 (441)
Q Consensus 254 la~~~~~~~~~------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG 297 (441)
+++........ ......+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 98754321100 001134799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCchhHHHH-HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC---H
Q 013504 298 VFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK---M 373 (441)
Q Consensus 298 ~il~elltG~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~ 373 (441)
|++|||++|..||........... ..|.. .+.......+++.+.+++.+|+. +|.+|++ +
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~ 290 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKE---------------TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGV 290 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCC---------------ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCH
Confidence 999999999999976543322111 11100 00000111345678899999997 8999998 8
Q ss_pred HHHHH
Q 013504 374 SEVVE 378 (441)
Q Consensus 374 ~evl~ 378 (441)
.+++.
T Consensus 291 ~~ll~ 295 (364)
T cd05599 291 NEIKS 295 (364)
T ss_pred HHHhc
Confidence 88887
No 77
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.2e-43 Score=340.33 Aligned_cols=253 Identities=24% Similarity=0.338 Sum_probs=200.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||+|....++.. ||+|.+..... .....+.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~- 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDI-----YAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD- 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-
Confidence 4689999999999999999998776653 99999876432 23356778999999999999999999987655
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++|+|.+++... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 75 ---NLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred ---eEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 359999999999999999764 35799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccc------cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQ------TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
++........ .......||+.|+|||++. ...++.++|||||||++|||++|..||...........+. .
T Consensus 148 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~---~ 223 (330)
T cd05601 148 SAARLTANKM-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIM---N 223 (330)
T ss_pred CCeECCCCCc-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHH---c
Confidence 9986543321 1233457999999999986 4567899999999999999999999997554322111110 0
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. .. .+.......++..+.+|+..||. +|.+||++.+++.
T Consensus 224 ~----~~-------~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 224 F----QR-------FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred C----CC-------ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 00 00001112355778899999998 9999999999986
No 78
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.4e-42 Score=329.50 Aligned_cols=271 Identities=24% Similarity=0.350 Sum_probs=199.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccC---CCCCeeeEEeEEecc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVV---EHPNLVKLIGYCAED 171 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~ 171 (441)
++|.+.+.||+|+||.||+|.+...+. ..||+|.+...... ....+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~ 76 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGG----RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 76 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCC----eEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecc
Confidence 368899999999999999998754321 24899988654322 224556777777665 699999999998643
Q ss_pred cc-CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 172 DE-RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 172 ~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
.. .....++||||++ ++|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+
T Consensus 77 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 77 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred cCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 21 2224689999995 6999999765556789999999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhhc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPHL 329 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~ 329 (441)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|.+||......... .+........
T Consensus 153 Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 153 DFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred cccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 99999865432 1234567899999999998889999999999999999999999999765443222 1111111000
Q ss_pred ccccc-----hhhhcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 330 TDAKK-----FTMILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 330 ~~~~~-----~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..... ....+.+.... .....++..+.+++.+||+.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 00000000000 111235567889999999999999999999985
No 79
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.1e-42 Score=323.63 Aligned_cols=261 Identities=27% Similarity=0.491 Sum_probs=207.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||+|.+...+. ....|+||.+...... ....+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-- 79 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGK--KEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP-- 79 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCC--CcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc--
Confidence 578999999999999999999865422 2335899988754332 34568899999999999999999999876654
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||+++++.++|+|||++
T Consensus 80 --~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 153 (266)
T cd05033 80 --VMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (266)
T ss_pred --eEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchh
Confidence 49999999999999999764 34789999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... ....+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~~----- 225 (266)
T cd05033 154 RRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIKAVEDGY----- 225 (266)
T ss_pred hcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHHHHHcCC-----
Confidence 87642221222223345678999999998899999999999999999998 999996543222 112111100
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
....+..++..+.+++.+||+.+|++||++.+|++.|++++
T Consensus 226 ---------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 226 ---------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 00112235577899999999999999999999999998763
No 80
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.6e-42 Score=326.49 Aligned_cols=256 Identities=29% Similarity=0.490 Sum_probs=210.3
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
...+|.+.+.||.|+||.||+|.+.. +. .+++|.+..........+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 76 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RV-----RVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEP- 76 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CC-----cEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCC-
Confidence 34678999999999999999999876 33 399999887665556778899999999999999999999987664
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++||||+++++|.+++....+..+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 77 ---~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 77 ---VYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred ---eEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 49999999999999999876567899999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ........
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~----- 220 (261)
T cd05148 151 ARLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQITAG----- 220 (261)
T ss_pred hhhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHHhC-----
Confidence 986543221 1223456778999999988889999999999999999998 899996544222 11111110
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.....+..++..+.+++.+||..+|.+||++.++++.|+.
T Consensus 221 ---------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 221 ---------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ---------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 0111223456788999999999999999999999999985
No 81
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-42 Score=337.69 Aligned_cols=266 Identities=24% Similarity=0.359 Sum_probs=202.6
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|++.+.||+|+||.||+|.+..++.. +|+|.+..... .....+.+|+.+++.++||||++++++|...+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~-----~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 76 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLI-----MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-- 76 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcE-----EEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--
Confidence 46899999999999999999998776543 88888765432 23456889999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+
T Consensus 77 --~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 77 --EISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred --EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 45999999999999999976 35789999999999999999999974 2799999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh-hcccc-
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP-HLTDA- 332 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~-~~~~~- 332 (441)
+...... ......||..|+|||++.+..++.++|||||||++|+|++|+.||................. .....
T Consensus 151 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (333)
T cd06650 151 SGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESE 226 (333)
T ss_pred chhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccc
Confidence 8754322 22345789999999999988899999999999999999999999975433222111100000 00000
Q ss_pred ----------------------c----chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 ----------------------K----KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 ----------------------~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ....+............++.++.+|+.+||+.||++||++.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 227 TSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0 000000000000001124567899999999999999999999987
No 82
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.4e-42 Score=327.65 Aligned_cols=261 Identities=26% Similarity=0.439 Sum_probs=205.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|++.+.||+|+||.||+|.+...+. .....+++|.+..... .....+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 81 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGM-DHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP-- 81 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCC-CCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc--
Confidence 468888999999999999998754332 1234589999875433 233678899999999999999999999887664
Q ss_pred eeEEEEEeccCCCChHHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEE
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF---------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NIL 240 (441)
.++||||+++++|.+++..+. ...+++..++.++.|++.||.|||++ +|+||||||+|||
T Consensus 82 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 82 --VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred --eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 499999999999999985321 23578889999999999999999998 9999999999999
Q ss_pred EcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHH
Q 013504 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQ 319 (441)
Q Consensus 241 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~ 319 (441)
++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~- 235 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV- 235 (283)
T ss_pred EcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-
Confidence 99999999999999986544332223344556788999999988889999999999999999998 9999965433221
Q ss_pred HHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 320 KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.+.+.... ....+..++..+.+++.+||+.+|++||++.+|++.|..
T Consensus 236 --~~~~~~~~--------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 --IEMVRKRQ--------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHcCC--------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22111100 001222456788999999999999999999999998863
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.8e-43 Score=339.80 Aligned_cols=243 Identities=26% Similarity=0.402 Sum_probs=195.9
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
+.||+|+||.||++.+..++. .||+|.+..... .....+.+|+.++..++||||+++++++...+ ..|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~----~~~ 71 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----RLC 71 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC----EEE
Confidence 369999999999999877654 499999875432 22356678999999999999999999987765 359
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHE-GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
+||||+++|+|..++.. ...+++..+..++.||+.||.|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 lv~E~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 72 FVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 99999999999998865 3578999999999999999999997 5 8999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------------- 211 (325)
T cd05594 147 IKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------------- 211 (325)
T ss_pred CCCC--cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC-------------
Confidence 3221 1223467999999999999999999999999999999999999999654332211111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVEV 379 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 379 (441)
...++..+++.+.+++.+||+.||++|+ ++.++++.
T Consensus 212 -----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 212 -----EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -----CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 0011223556789999999999999996 89998863
No 84
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.1e-42 Score=328.58 Aligned_cols=262 Identities=23% Similarity=0.415 Sum_probs=207.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|.+.+.||+|+||.||+|.+..+........||+|.+....... ...+.+|+.++..++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~-- 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP-- 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc--
Confidence 3477778899999999999998765444455679999997554332 3567889999999999999999999987664
Q ss_pred eeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL 241 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl 241 (441)
.++++||+++++|.+++..+. ...+++..++.++.|++.||.|||+. +|+||||||+|||+
T Consensus 83 --~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 83 --LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred --eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 489999999999999985321 23578889999999999999999988 99999999999999
Q ss_pred cCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHH
Q 013504 242 DEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQK 320 (441)
Q Consensus 242 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~ 320 (441)
++++.+||+|||+++...............+++.|+|||.+.++.++.++|||||||++|||++ |..||.......
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--- 234 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--- 234 (283)
T ss_pred cCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999886543322222334456789999999988899999999999999999998 888986543322
Q ss_pred HHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 321 LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
....+... . ....+..++..+.+++..||+.+|.+||++.+|+..|+.
T Consensus 235 ~~~~i~~~-------------~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRNR-------------Q-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHcC-------------C-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 22211110 0 011233567789999999999999999999999998863
No 85
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.9e-42 Score=354.14 Aligned_cols=261 Identities=25% Similarity=0.341 Sum_probs=208.2
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|.+.+.||+|+||.||+|.+..++. .||||.+..... .....+.+|+.++..++|+||+++++.+...
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~-----~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGE-----PFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCC-----EEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 345789999999999999999999876654 499999876433 2345678899999999999999998877654
Q ss_pred ccC----CeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 172 DER----GIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 172 ~~~----~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
+.. ....++||||+++|+|.+++..+ ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~ 180 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNG 180 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCC
Confidence 321 12357999999999999999653 235789999999999999999999998 999999999999999999
Q ss_pred cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~---~~~~~ 257 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE---VMHKT 257 (496)
T ss_pred CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH---HHHHH
Confidence 999999999986543322223445789999999999999999999999999999999999999997543221 11111
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
. .. . ....+..+++.+.+++.+||+.||.+||++.+++..
T Consensus 258 ~---~~----------~-~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 L---AG----------R-YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred h---cC----------C-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0 00 0 011223456789999999999999999999999873
No 86
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.1e-42 Score=336.61 Aligned_cols=245 Identities=26% Similarity=0.441 Sum_probs=194.8
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHh---ccCCCCCeeeEEeEEeccc
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVL---GVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~ 172 (441)
|.+.+.||+|+||.||+|.+..++.. ||||.+..... .....+.+|+.++ +.++||||+++++++...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGEL-----YAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 67788999999999999998776653 99999875431 2234566666654 5678999999999998665
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..|+||||+++|+|..++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 76 ----~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 ----HVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ----EEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 45999999999999988854 5799999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
|+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+...
T Consensus 146 g~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------- 216 (324)
T cd05589 146 GLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------- 216 (324)
T ss_pred cCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------
Confidence 9987543221 2234568999999999999999999999999999999999999999765432211111100
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
...++..++..+.+++.+||..||.+|| ++.++++
T Consensus 217 -----------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 217 -----------EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0012223567788999999999999999 4666665
No 87
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.6e-42 Score=344.02 Aligned_cols=266 Identities=23% Similarity=0.403 Sum_probs=208.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCC-CCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.+.||+|+||.||+|.+.+.........||+|++....... ...+.+|+.+|.++. ||||+++++++.....
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 35688889999999999999998765444455679999997653322 346889999999997 9999999999987654
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC-------------------------------------------------------
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF------------------------------------------------------- 198 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~------------------------------------------------------- 198 (441)
.++||||+++|+|.+++....
T Consensus 116 ----~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 116 ----IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred ----cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 499999999999999996421
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCC
Q 013504 199 -----------------------------------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237 (441)
Q Consensus 199 -----------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~ 237 (441)
...+++..++.++.|++.||.|||+. +|+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 12367778899999999999999987 9999999999
Q ss_pred cEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCch
Q 013504 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPK 316 (441)
Q Consensus 238 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~ 316 (441)
|||+++++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999986433221112223467889999999998889999999999999999998 89998654322
Q ss_pred hHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
.. ....+... .....+..++..+.+++.+||..+|.+||++.+|++.|++++
T Consensus 349 ~~--~~~~~~~~--------------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 EQ--FYNAIKRG--------------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HH--HHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11 11111100 001112235678999999999999999999999999999875
No 88
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.2e-42 Score=326.17 Aligned_cols=275 Identities=29% Similarity=0.448 Sum_probs=206.7
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
|...+.||+|+||+||++.+.... ......||+|.+..... .....+.+|+.+|+.++||||+++++++...... .
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPAN-DGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK--G 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEcccc-CCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc--e
Confidence 488899999999999988754322 12234599999876533 2346788999999999999999999998765432 4
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++||||+++++|.+++.. ..+++..++.++.|++.||.|||++ +|+||||||+|||++.++.++|+|||+++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 5899999999999999975 4699999999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCCcc-eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 258 GPSDGLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 258 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
........ ......++..|+|||++.+..++.++||||||+++|+|++|..||....... .......... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~ 234 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQ-MTVVRLI 234 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccc-cchhhhh
Confidence 54322111 1122345677999999988889999999999999999999999986433211 1111111000 0001111
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
...+.......+..++..+.+++.+||+.+|++||++++|++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111122223456678999999999999999999999999999864
No 89
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1e-41 Score=347.85 Aligned_cols=274 Identities=20% Similarity=0.311 Sum_probs=199.3
Q ss_pred HHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC------CCCeee
Q 013504 90 SELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE------HPNLVK 163 (441)
Q Consensus 90 ~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~ 163 (441)
+++...+++|.+.++||+|+||.||+|.+..++. .||||++.... .....+..|+.++..++ |++|++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~-----~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~ 195 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKE-----YCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMK 195 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCe-----EEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceee
Confidence 3444556889999999999999999999876654 49999986432 22334556777766664 456899
Q ss_pred EEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC
Q 013504 164 LIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243 (441)
Q Consensus 164 l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~ 243 (441)
+++++..... +.|+|||++ +++|.+++.. ...+++..+..|+.||+.||.|||++ .+||||||||+|||++.
T Consensus 196 i~~~~~~~~~---~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 196 IQRYFQNETG---HMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMET 267 (467)
T ss_pred eEEEEEcCCc---eEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEec
Confidence 9998875432 468999998 8899999876 36799999999999999999999973 28999999999999987
Q ss_pred CC----------------cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCC
Q 013504 244 QW----------------NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGR 307 (441)
Q Consensus 244 ~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~ 307 (441)
++ .+||+|||++..... .....+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence 65 499999998864322 234578999999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHhhhhhccccc-------chhhhc------CCCCCCc----------c-hHHHHHHHHHHHHHhh
Q 013504 308 RPLDRNRPKSEQKLLEWVRPHLTDAK-------KFTMIL------DPKLEGK----------Y-SIKLAQKLAAVANKCL 363 (441)
Q Consensus 308 ~P~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~------~~~~~~~----------~-~~~~~~~l~~li~~cl 363 (441)
.||...........+......+.... ....+. .+..... . .......+.+||.+||
T Consensus 343 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 422 (467)
T PTZ00284 343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLL 422 (467)
T ss_pred CCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhC
Confidence 99976654333332222111100000 000000 0000000 0 0012356789999999
Q ss_pred cccCCCCCCHHHHHH--HHHH
Q 013504 364 ARQAKGRPKMSEVVE--VLNK 382 (441)
Q Consensus 364 ~~dP~~RPs~~evl~--~L~~ 382 (441)
+.||++||++.++++ +|.+
T Consensus 423 ~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 423 HYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred CcChhhCCCHHHHhcCccccc
Confidence 999999999999998 5544
No 90
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6e-42 Score=326.39 Aligned_cols=261 Identities=26% Similarity=0.445 Sum_probs=206.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|...+.||+|+||.||++.............+++|.+..........+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP--- 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc---
Confidence 46788889999999999999865433333445689999876665556788999999999999999999999887653
Q ss_pred eEEEEEeccCCCChHHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQ-------------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~ 243 (441)
.++||||+++++|.+++..... ..+++..++.++.|++.||.|||+. +|+||||||+|||+++
T Consensus 82 -~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~ 157 (280)
T cd05092 82 -LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ 157 (280)
T ss_pred -eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC
Confidence 4999999999999999875321 3588999999999999999999988 9999999999999999
Q ss_pred CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHH
Q 013504 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 244 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~ 322 (441)
++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||............
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 99999999999975543222222233456788999999998899999999999999999998 89999654332221111
Q ss_pred HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. .. . ....+..++..+.+++.+||+.||++||++.+|++.|+
T Consensus 238 ~---~~----~----------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 T---QG----R----------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred H---cC----c----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1 00 0 00111235567899999999999999999999999886
No 91
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.5e-42 Score=337.64 Aligned_cols=249 Identities=27% Similarity=0.404 Sum_probs=193.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|+..+.||+|+||.||+|.+..++. .||||++...... ....+.+|+.+++.++|+||+++++++...+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 145 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGR-----LYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--- 145 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCC-----EEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC---
Confidence 456677789999999999999876654 4999998654332 2456889999999999999999999987665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++|+|.+.. ..++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 146 -~~~lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 146 -EIQVLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred -eEEEEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 359999999999986532 345678889999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
+...... .......||..|+|||++.. ...+.++|||||||++|||++|+.||..................
T Consensus 216 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-- 291 (353)
T PLN00034 216 RILAQTM--DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS-- 291 (353)
T ss_pred eeccccc--ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc--
Confidence 8654321 12234679999999998743 23456899999999999999999999743332222222111000
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
........++..+.+|+.+||..||++||++.++++.
T Consensus 292 ------------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 ------------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011223456789999999999999999999999983
No 92
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-42 Score=341.87 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=204.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||+|.+..++. .||||++..... .....+.+|+.++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQ-----VYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE- 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCC-----EEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-
Confidence 468999999999999999999886654 499999875432 23456788999999999999999999987765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 75 ---HLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred ---eEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 459999999999999999764 6799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCC---------------------------CcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhC
Q 013504 254 LARLGPSDG---------------------------LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITG 306 (441)
Q Consensus 254 la~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG 306 (441)
++....... .........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 998654332 00123346799999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHH-HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-HHHHHHH
Q 013504 307 RRPLDRNRPKSEQKL-LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-MSEVVEV 379 (441)
Q Consensus 307 ~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 379 (441)
+.||........... ..|.. .+.......+++.+.+++.+||. +|.+||+ +.++++.
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKE---------------SLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCC---------------cccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 999976553222111 11100 00000111256788999999997 9999999 9999983
No 93
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.1e-42 Score=325.89 Aligned_cols=262 Identities=25% Similarity=0.428 Sum_probs=208.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|.+.+.||+|+||.||+|.............|++|.+..... .....+.+|+.++..++||||+++++++.....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~- 83 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP- 83 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC-
Confidence 367899999999999999999987655334456699999875432 334567899999999999999999999987654
Q ss_pred CeeEEEEEeccCCCChHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRF--------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~ 246 (441)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.
T Consensus 84 ---~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~ 157 (277)
T cd05032 84 ---TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLT 157 (277)
T ss_pred ---cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCC
Confidence 499999999999999996532 23478889999999999999999988 9999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhh
Q 013504 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 325 (441)
+||+|||+++...............+|..|+|||.+.+..++.++|||||||++||+++ |..||.......... ..
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~---~~ 234 (277)
T cd05032 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK---FV 234 (277)
T ss_pred EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH---HH
Confidence 99999999986544332222334567889999999988889999999999999999998 999996544332222 11
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. ... ....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 235 ~----~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 I----DGG----------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred h----cCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1 000 00112234678999999999999999999999999885
No 94
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.9e-42 Score=324.57 Aligned_cols=263 Identities=26% Similarity=0.439 Sum_probs=207.9
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|++.+.||+|+||.||+|.+..++.. ....||+|.+...... ....+.+|+.++..++||||+++++++....
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~-~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGEN-VKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTST-- 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCc-cceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCC--
Confidence 36788999999999999999998765543 2345899998754332 3467889999999999999999999987533
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.+++|||+++|+|.+++... ...+++..++.++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 83 ---~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~ 155 (279)
T cd05109 83 ---VQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGL 155 (279)
T ss_pred ---cEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCc
Confidence 37999999999999999753 35689999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.......... ++....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~---~~~~~~---- 228 (279)
T cd05109 156 ARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD---LLEKGE---- 228 (279)
T ss_pred eeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HHHCCC----
Confidence 986543322111222345678999999988899999999999999999998 899996543322211 111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
....+..++..+.+++.+||..||++||++.++++.|..+..
T Consensus 229 ----------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 229 ----------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred ----------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 001122355678999999999999999999999999887754
No 95
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.6e-42 Score=337.60 Aligned_cols=268 Identities=25% Similarity=0.396 Sum_probs=208.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|.+.+.........||||.+..... .....+.+|+.+|.++ +||||+++++++...+.
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~- 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC-
Confidence 57999999999999999999977655555566799999975432 2345688999999999 78999999998865543
Q ss_pred CeeEEEEEeccCCCChHHHHhhcC--------------------------------------------------------
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRF-------------------------------------------------------- 198 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~-------------------------------------------------------- 198 (441)
..++||||+++|+|.+++....
T Consensus 86 --~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 86 --PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred --ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 3589999999999999986431
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeec
Q 013504 199 ---------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTA 269 (441)
Q Consensus 199 ---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 269 (441)
...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 12467888899999999999999998 999999999999999999999999999986533222122223
Q ss_pred eecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcch
Q 013504 270 VVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYS 348 (441)
Q Consensus 270 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (441)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||........ ...... .... ...+
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~~~~~----~~~~----------~~~~ 304 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLK----EGTR----------MRAP 304 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HHHHHh----ccCC----------CCCC
Confidence 446678999999988899999999999999999997 9999965432111 111110 0000 0011
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 349 IKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 349 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
...++.+.+++..||+.+|++||++.+|++.|+.+++.
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 12345788999999999999999999999999998754
No 96
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.7e-42 Score=343.45 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=196.7
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.|..++.||+|+||.||+|....++.. ||+|++..... .....+.+|+.+++.++||||+++++.+.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~-----~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-- 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKAL-----YAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-- 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCE-----EEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--
Confidence 588999999999999999998776654 99999875432 22356788999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..|+|||||++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 75 --NLYFVMDYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred --EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 45999999999999999976 35789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCC---------------------------------------------CcceeeceecccCcCCccccccCCCCc
Q 013504 255 ARLGPSDG---------------------------------------------LSHVSTAVVGTIGYAAPEYIQTGRLTY 289 (441)
Q Consensus 255 a~~~~~~~---------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ 289 (441)
++...... ........+||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 75321000 000112357999999999999999999
Q ss_pred cccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCC
Q 013504 290 KSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK 368 (441)
Q Consensus 290 ~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 368 (441)
++|||||||++|||++|+.||....+...... ..+.. .+.......+++.+.+++.+|+ .+|.
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~~~~~s~~~~~li~~l~-~~p~ 291 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT---------------SLHIPPQAKLSPEASDLIIKLC-RGPE 291 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCC---------------CcCCCCcccCCHHHHHHHHHHc-cCHh
Confidence 99999999999999999999976543322211 11100 0011111234567788888865 5999
Q ss_pred CCCC---HHHHHH
Q 013504 369 GRPK---MSEVVE 378 (441)
Q Consensus 369 ~RPs---~~evl~ 378 (441)
+|++ +.+++.
T Consensus 292 ~R~~~~~~~ei~~ 304 (382)
T cd05625 292 DRLGKNGADEIKA 304 (382)
T ss_pred HcCCCCCHHHHhc
Confidence 9987 887775
No 97
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.6e-42 Score=334.93 Aligned_cols=242 Identities=26% Similarity=0.448 Sum_probs=194.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCC-CCeeeEEeEEecccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEH-PNLVKLIGYCAEDDE 173 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~ 173 (441)
+|.+.+.||+|+||.||+|....++. .||+|++..... .....+..|..++..+.| ++|+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDE-----LYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD- 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-
Confidence 58889999999999999999877654 399999875422 234567789999999966 46888888887655
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 75 ---RLYFVMEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred ---EEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 35999999999999999975 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+...
T Consensus 147 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~~i~~~----- 216 (324)
T cd05587 147 MCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQSIMEH----- 216 (324)
T ss_pred cceecCCCC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHcC-----
Confidence 987532221 12345679999999999999999999999999999999999999997554322 11111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
...++..++..+.+++.+||..||.+|++.
T Consensus 217 ----------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 217 ----------NVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 011222355678899999999999999976
No 98
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.4e-42 Score=333.94 Aligned_cols=242 Identities=25% Similarity=0.451 Sum_probs=191.9
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||+|.+..++.. ||+|.+..... .....+..|..++..+ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~----~~ 71 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEF-----FAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE----HL 71 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EE
Confidence 3699999999999998876654 99999875421 2234456677777654 8999999999987665 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
++||||++||+|..++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 72 FFVMEYLNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 999999999999999976 35789999999999999999999998 9999999999999999999999999999854
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+...
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~~i~~~---------- 211 (316)
T cd05592 147 MNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFDSILND---------- 211 (316)
T ss_pred CCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHcC----------
Confidence 3222 22345679999999999999899999999999999999999999997544321 11111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH-HHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS-EVVE 378 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 378 (441)
...++..++..+.+++.+||+.+|.+||++. ++++
T Consensus 212 -----~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 212 -----RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred -----CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 0112223556788999999999999999875 4543
No 99
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.1e-41 Score=325.89 Aligned_cols=267 Identities=22% Similarity=0.408 Sum_probs=207.4
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
..++|++.+.||+|+||.||+|..+..........||+|.+..... .....+.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3578999999999999999999876533333345699998865432 223457789999999999999999999876654
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF--------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
.++||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++
T Consensus 84 ----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~ 156 (288)
T cd05061 84 ----TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 156 (288)
T ss_pred ----cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCC
Confidence 499999999999999996532 13456678899999999999999998 999999999999999999
Q ss_pred cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHh
Q 013504 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~ 324 (441)
.++|+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~~ 233 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLKF 233 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH
Confidence 999999999986543322222223355778999999998899999999999999999998 788986543322 1111
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
... ... ...+..++..+.+++.+||+.+|++||++.++++.|.+.+.
T Consensus 234 ~~~----~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 234 VMD----GGY----------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred HHc----CCC----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 110 000 01112345789999999999999999999999999988653
No 100
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.2e-42 Score=342.35 Aligned_cols=253 Identities=24% Similarity=0.343 Sum_probs=197.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||++....++.. ||||++..... .....+.+|+.++..++||||+++++++.+..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~- 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKI-----YAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ- 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCE-----EEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Confidence 4789999999999999999998776653 99999865432 22356778999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 75 ---YLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred ---eeEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 35999999999999999975 46789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCC-----------c----------------------------------ceeeceecccCcCCccccccCCCC
Q 013504 254 LARLGPSDGL-----------S----------------------------------HVSTAVVGTIGYAAPEYIQTGRLT 288 (441)
Q Consensus 254 la~~~~~~~~-----------~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~ 288 (441)
+++....... . ......+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 9963211000 0 000125799999999999999999
Q ss_pred ccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccC
Q 013504 289 YKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQA 367 (441)
Q Consensus 289 ~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 367 (441)
.++|||||||++|||++|..||.......... ...|... +.......++..+.+++.+||. +|
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p~~~~~s~~~~dli~~lL~-~~ 290 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRET---------------LYFPDDIHLSVEAEDLIRRLIT-NA 290 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCc---------------cCCCCCCCCCHHHHHHHHHHhc-CH
Confidence 99999999999999999999997654322111 1111000 0000011245678899999997 66
Q ss_pred CCC---CCHHHHHHH
Q 013504 368 KGR---PKMSEVVEV 379 (441)
Q Consensus 368 ~~R---Ps~~evl~~ 379 (441)
.+| +++.+++..
T Consensus 291 ~~r~~r~~~~~~l~h 305 (377)
T cd05629 291 ENRLGRGGAHEIKSH 305 (377)
T ss_pred hhcCCCCCHHHHhcC
Confidence 665 599998874
No 101
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6.2e-42 Score=330.11 Aligned_cols=267 Identities=21% Similarity=0.325 Sum_probs=197.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|.+.+.||+|+||.||+|....++. .||+|++...... ....+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGK-----LVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-- 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCC-----EEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC--
Confidence 3689999999999999999999876654 3999998754322 2345678999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||++ ++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 77 --~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 77 --TLTLVFEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred --eEEEEEECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 3599999995 6888888653 35688999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhhcccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPHLTDA 332 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~~~~ 332 (441)
++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||......... ..+..........
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 227 (303)
T cd07869 150 ARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 227 (303)
T ss_pred ceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChh
Confidence 87543221 12234578999999998865 45788999999999999999999999764332111 1111110000000
Q ss_pred -----cchhhhcCCCCC----CcchH-----HHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 -----KKFTMILDPKLE----GKYSI-----KLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 -----~~~~~~~~~~~~----~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
............ ..... ..+..+.+++.+||+.||++|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000000 00000 12356889999999999999999999986
No 102
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=9.7e-42 Score=323.07 Aligned_cols=262 Identities=25% Similarity=0.422 Sum_probs=201.9
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEecccc--C
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE--R 174 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~ 174 (441)
|.+.+.||+|+||.||+|.+...+. ...+|+|.+.... ......+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~---~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 77 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDS---ILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEG 77 (272)
T ss_pred CccccccCcccCceEEEeEEccCCC---eeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccC
Confidence 3567789999999999999866543 2348999886542 2334678899999999999999999998754322 1
Q ss_pred CeeEEEEEeccCCCChHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSR----FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
....++||||+++|+|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+
T Consensus 78 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 154 (272)
T cd05075 78 YPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVA 154 (272)
T ss_pred CCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEEC
Confidence 12358999999999999987421 124588999999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|||+++...............+++.|++||++.+..++.++|||||||++|||++ |..||....... ....+..
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~-- 229 (272)
T cd05075 155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---IYDYLRQ-- 229 (272)
T ss_pred CCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHc--
Confidence 9999987543322111223356778999999998899999999999999999999 889996543221 1111111
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
... ...+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 230 --~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 --GNR----------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --CCC----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 011123556789999999999999999999999999875
No 103
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.6e-42 Score=321.70 Aligned_cols=255 Identities=26% Similarity=0.425 Sum_probs=204.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|++.+.||+|+||.||+|.+..+. .||+|.+.... ...+.+.+|+.++++++||||+++++++.....
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~------~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-- 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTT------PVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEP-- 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCe------EEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCC--
Confidence 457899999999999999999865432 48999987543 235678899999999999999999999877653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|.+++....+..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++
T Consensus 76 --~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 76 --IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred --eeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 49999999999999999765556789999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||......... ..+....
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---~~~~~~~----- 221 (261)
T cd05068 151 RVIKEDIYE-AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL---QQVDQGY----- 221 (261)
T ss_pred EEccCCccc-ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH---HHHHcCC-----
Confidence 865432111 1111223457999999998899999999999999999999 99999754432211 1111000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
....+..++..+.+++.+||+.+|.+||++.++++.|++
T Consensus 222 ---------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 222 ---------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 001122355789999999999999999999999999985
No 104
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.5e-42 Score=320.09 Aligned_cols=271 Identities=24% Similarity=0.319 Sum_probs=206.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCC-eeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPN-LVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~ 173 (441)
..|..+++||+|+||+||+|+...++.. ||+|++...... -.....+|+.+|+.++|+| |+++++++.....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~-----VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKF-----VALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCE-----EEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc
Confidence 4566677899999999999999888754 999999866442 2355689999999999999 9999999988662
Q ss_pred --CCeeEEEEEeccCCCChHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 174 --RGIQRLLIYEYMPNRSVQDHLTSRFQ--ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 174 --~~~~~~lv~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
....+++|+||+ .-+|..++..... ..++...+..+++||+.||+|||++ +|+||||||+||||+++|.+||
T Consensus 86 ~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKl 161 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKL 161 (323)
T ss_pred ccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEee
Confidence 122468999999 5699999986532 3677789999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
+|||+|+...... ...+..++|.+|.|||++.+. .|+...||||+|||++||++++.-|.+.........+-....
T Consensus 162 aDFGlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG- 238 (323)
T KOG0594|consen 162 ADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG- 238 (323)
T ss_pred eccchHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC-
Confidence 9999999654332 235567899999999999886 799999999999999999999999987665333322211110
Q ss_pred cccccchhhhc---C--CCCC-----CcchH---HHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 329 LTDAKKFTMIL---D--PKLE-----GKYSI---KLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 329 ~~~~~~~~~~~---~--~~~~-----~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.+....+..+. + .... ..+.. .......+++.+||+.+|.+|.|++.++..
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 01111111110 0 0000 01111 112478899999999999999999999885
No 105
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.6e-42 Score=327.05 Aligned_cols=251 Identities=27% Similarity=0.452 Sum_probs=201.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
+|++.++||+|+||.||++.+..++. .||+|.+...... ....+.+|+.+++.++||||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCc-----eEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--
Confidence 47888999999999999999876554 4999998754322 2245678999999999999999999987665
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 74 --ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 359999999999999988765456799999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH-Hhhhhhccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAK 333 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~~~~~~~ 333 (441)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...........+ ..+..
T Consensus 149 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~------ 219 (285)
T cd05605 149 AVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE------ 219 (285)
T ss_pred ceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh------
Confidence 98653321 123457899999999999889999999999999999999999999754332211111 11100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
....++..++..+.+++.+||..||.+|| ++.+++.
T Consensus 220 ---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 220 ---------DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ---------cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 01122334677889999999999999999 7777765
No 106
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-42 Score=334.71 Aligned_cols=253 Identities=25% Similarity=0.374 Sum_probs=214.1
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCC-CCCeeeEEeEEec
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVE-HPNLVKLIGYCAE 170 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~-hpnIv~l~~~~~~ 170 (441)
....|++.+.||+|.||.||+++.+.++.. +|+|.+.+..... ...+.+|+.+|+++. |||||.++++|.+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~-----~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKE-----VACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCce-----eEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence 346788889999999999999999988664 9999998766543 357889999999997 9999999999998
Q ss_pred cccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC----CCc
Q 013504 171 DDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWN 246 (441)
Q Consensus 171 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~----~~~ 246 (441)
.+. .++|||+|.||.|.+.+..+ .+++..+..++.|++.++.|||+. ||+||||||+|+|+.. ++.
T Consensus 108 ~~~----~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 108 PDS----VYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred CCe----EEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 874 49999999999999999875 399999999999999999999997 9999999999999953 357
Q ss_pred EEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhh
Q 013504 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~ 326 (441)
+|++|||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|.+||...........+. .
T Consensus 178 ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~--~ 252 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAIL--R 252 (382)
T ss_pred EEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHH--c
Confidence 99999999998665 335667899999999999999999999999999999999999999997654332222111 0
Q ss_pred hhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.+..+.......++..+.+++..|+..||..|+++.++++.
T Consensus 253 ------------~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 253 ------------GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------------CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11123344556778899999999999999999999999983
No 107
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.2e-42 Score=334.32 Aligned_cols=245 Identities=29% Similarity=0.434 Sum_probs=194.9
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc----hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL----QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||++...... .....||+|.+..... .....+..|+.+|+.++||||+++++++...+ ..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~----~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGA--DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG----KL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccC--CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC----eE
Confidence 57999999999999864322 1234599999875322 22345678999999999999999999998765 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 76 YLILEYLSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKES 150 (323)
T ss_pred EEEEeCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence 999999999999999976 46788899999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..
T Consensus 151 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~---~~~~~~----------- 214 (323)
T cd05584 151 IHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT---IDKILK----------- 214 (323)
T ss_pred ccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH---HHHHHc-----------
Confidence 3221 123346799999999999988899999999999999999999999976443221 111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
.. ...+..+++.+.+++.+||+.+|++|| ++.+++.
T Consensus 215 --~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 215 --GK--LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --CC--CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 00 011223456789999999999999999 7888877
No 108
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-42 Score=343.91 Aligned_cols=253 Identities=25% Similarity=0.333 Sum_probs=198.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.+|++.+.||+|+||.||+|....++. .||||++..... .....+.+|+.+|+.++||||+++++.+.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNA-----LYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD- 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCC-----EEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Confidence 368999999999999999999877654 499999865432 12355778999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 75 ---NLYFVMDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred ---EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 45999999999999999976 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCC-----------------------------------------CcceeeceecccCcCCccccccCCCCcccc
Q 013504 254 LARLGPSDG-----------------------------------------LSHVSTAVVGTIGYAAPEYIQTGRLTYKSD 292 (441)
Q Consensus 254 la~~~~~~~-----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 292 (441)
++....... ........+||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 975321000 000112357999999999999999999999
Q ss_pred chhHHHHHHHHHhCCCCCCCCCchhHHHHH-HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC
Q 013504 293 IWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP 371 (441)
Q Consensus 293 vwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 371 (441)
||||||++|||++|+.||...........+ .|.. .+.......++..+.+++.+|+ .+|.+|+
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~~~~~s~~~~~li~~l~-~~p~~R~ 290 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWET---------------TLHIPSQAKLSREASDLILRLC-CGAEDRL 290 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCc---------------cccCCCCCCCCHHHHHHHHHHh-cCHhhcC
Confidence 999999999999999999765543322211 1100 0000111234567788888876 5999999
Q ss_pred ---CHHHHHHH
Q 013504 372 ---KMSEVVEV 379 (441)
Q Consensus 372 ---s~~evl~~ 379 (441)
++.+++..
T Consensus 291 ~~~t~~ell~h 301 (376)
T cd05598 291 GKNGADEIKAH 301 (376)
T ss_pred CCCCHHHHhCC
Confidence 88998873
No 109
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-41 Score=319.28 Aligned_cols=248 Identities=25% Similarity=0.455 Sum_probs=196.3
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
.||+|+||.||+|.+..++. .+|+|.+..... .....+.+|+.+++.++||||+++++++..... .++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~ 72 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNT-----PVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP----IYIVM 72 (252)
T ss_pred ccCcccCccEEEEEEecCCc-----eEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCC----eEEEE
Confidence 69999999999999876654 389998765432 234568899999999999999999999987654 49999
Q ss_pred eccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCC
Q 013504 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262 (441)
Q Consensus 183 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 262 (441)
||+++++|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 73 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 148 (252)
T cd05084 73 ELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGV 148 (252)
T ss_pred eeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccc
Confidence 999999999999653 35689999999999999999999998 99999999999999999999999999987543221
Q ss_pred CcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 263 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
.........++..|+|||.+.++.++.++|||||||++|||++ |..||..............
T Consensus 149 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~----------------- 211 (252)
T cd05084 149 YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ----------------- 211 (252)
T ss_pred ccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-----------------
Confidence 1111111223457999999999899999999999999999998 8899965433222111110
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
......+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0011122345678999999999999999999999999875
No 110
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.3e-41 Score=326.93 Aligned_cols=263 Identities=28% Similarity=0.461 Sum_probs=205.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|....++.. ..+++|.+.... ....+.+.+|+.++.++ +||||+++++++.....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~- 77 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLK---MNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGY- 77 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCc---ceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCc-
Confidence 4788999999999999999988765432 236788776422 23346788999999999 79999999999877653
Q ss_pred CeeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEE
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NIL 240 (441)
.++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+|||
T Consensus 78 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil 151 (297)
T cd05089 78 ---LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVL 151 (297)
T ss_pred ---ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEE
Confidence 499999999999999996531 13588899999999999999999998 9999999999999
Q ss_pred EcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHH
Q 013504 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQ 319 (441)
Q Consensus 241 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~ 319 (441)
++.++.+||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~-- 226 (297)
T cd05089 152 VGENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE-- 226 (297)
T ss_pred ECCCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 999999999999998743211 01111233557999999988889999999999999999997 999997544322
Q ss_pred HHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhhcc
Q 013504 320 KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAAET 389 (441)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 389 (441)
....... ......+..++..+.+++.+||+.+|.+||++.++++.|..+.+....
T Consensus 227 -~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 227 -LYEKLPQ--------------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred -HHHHHhc--------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111100 001112223567789999999999999999999999999998876533
No 111
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.9e-42 Score=333.90 Aligned_cols=242 Identities=25% Similarity=0.441 Sum_probs=194.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
+|.+.+.||+|+||.||+|.+..++.. ||+|.+..... .....+..|..++..+ +||+|+++++++...+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDEL-----YAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD- 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-
Confidence 588899999999999999998776543 99999875432 2234566788888877 6899999999987765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 75 ---RLYFVMEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---EEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 35999999999999999875 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +...+...
T Consensus 147 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~~~~i~~~----- 216 (323)
T cd05616 147 MCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIMEH----- 216 (323)
T ss_pred CceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---HHHHHHhC-----
Confidence 997543221 12345679999999999999999999999999999999999999997654322 11111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
...++...+..+.+++.+||+.+|.+|++.
T Consensus 217 ----------~~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 217 ----------NVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----------CCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 011223456778999999999999999984
No 112
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-42 Score=341.02 Aligned_cols=260 Identities=24% Similarity=0.327 Sum_probs=196.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|++.+.||+|+||.||+|.+..++.. ||+|.... ..+.+|+.+|++++||||+++++++.....
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~-----vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~--- 157 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEH-----VVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKF--- 157 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCE-----EEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCe---
Confidence 5799999999999999999998877654 89997532 346789999999999999999999976553
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++|||++ +++|..++..+ ..+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 158 -~~lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 158 -TCLILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred -eEEEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 49999999 57899988663 5789999999999999999999998 99999999999999999999999999997
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchh-----HH---HHHHhhhhh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS-----EQ---KLLEWVRPH 328 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~-----~~---~~~~~~~~~ 328 (441)
...... ........||+.|+|||++.+..++.++|||||||++|||++|..||....... .. .++......
T Consensus 231 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~ 309 (391)
T PHA03212 231 FPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTH 309 (391)
T ss_pred cccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCC
Confidence 533221 112334689999999999999999999999999999999999998874322110 00 111100000
Q ss_pred c---c--cccchhhh---------cCCCCCC--cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 L---T--DAKKFTMI---------LDPKLEG--KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 ~---~--~~~~~~~~---------~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. . ........ ..+.... ......+..+.+|+.+||+.||++|||++++++
T Consensus 310 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 310 PNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0 00000000 0000000 011235668999999999999999999999997
No 113
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.9e-42 Score=334.11 Aligned_cols=237 Identities=26% Similarity=0.443 Sum_probs=191.1
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
++||+|+||.||+|.+..++.. ||+|++..... .....+..|..++..+ +||||+++++++...+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~----~~ 71 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRL-----YAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD----RL 71 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCE-----EEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC----EE
Confidence 3699999999999998776543 99999875421 2345667888888876 7999999999997765 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~iv~Ey~~~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred EEEEcCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 999999999999999876 35799999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+.. ..
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~~i~~---~~------ 212 (320)
T cd05590 147 IFNG--KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LFEAILN---DE------ 212 (320)
T ss_pred CcCC--CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHHHHhc---CC------
Confidence 3221 12344679999999999999999999999999999999999999997654322 1111110 00
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
...+..++..+.+++.+||+.||++||++
T Consensus 213 ------~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 213 ------VVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ------CCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 01122355778999999999999999998
No 114
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.6e-41 Score=322.83 Aligned_cols=262 Identities=25% Similarity=0.429 Sum_probs=204.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|.+.+.||+|+||.||+|.+...........|++|.+...... ....+.+|+.+++.++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4679999999999999999999876332223445899988654322 235688999999999999999999998876543
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC---c
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQ-----ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW---N 246 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~---~ 246 (441)
++||||+++++|.+++..... ..+++..++.++.||+.||.|||++ +++||||||+|||++.++ .
T Consensus 85 ----~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 85 ----FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred ----EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcc
Confidence 899999999999999975421 2589999999999999999999998 999999999999998765 5
Q ss_pred EEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhh
Q 013504 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~ 325 (441)
+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...........+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-- 235 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-- 235 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH--
Confidence 89999999986533221111122334568999999998999999999999999999997 999997544332222111
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.. .....+..++..+.+++.+||+.+|++||++.+|++.|+
T Consensus 236 -~~--------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 -GG--------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -cC--------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00 001112345678899999999999999999999999885
No 115
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.5e-42 Score=333.82 Aligned_cols=242 Identities=25% Similarity=0.451 Sum_probs=194.5
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
++||+|+||.||+|.+..++.. ||+|++..... .....+..|..++..+ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~----~~ 71 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEV-----YAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD----RL 71 (321)
T ss_pred CccccCCCeEEEEEEECCCCCE-----EEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----eE
Confidence 3699999999999998776543 99999875422 2334567888998866 8999999999998765 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 72 FFVMEYVNGGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 999999999999999875 45789999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+.. ..
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~~i~~---~~------ 212 (321)
T cd05591 147 ILNG--VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFESILH---DD------ 212 (321)
T ss_pred ccCC--ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHHHHHc---CC------
Confidence 3221 12344679999999999999999999999999999999999999997654322 1111111 00
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-------CHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-------KMSEVVE 378 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~ 378 (441)
...+..++..+.+++.+||..||++|| ++.++++
T Consensus 213 ------~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 213 ------VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 011123456788999999999999999 7777776
No 116
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.7e-42 Score=346.40 Aligned_cols=274 Identities=22% Similarity=0.349 Sum_probs=200.9
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccc---
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD--- 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--- 172 (441)
..+|.+.+.||+|+||.||+|.+..++.. ||||++.... ....+|+.+|+.++||||+++++++....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~-----vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEK-----VAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCE-----EEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 46799999999999999999998776553 9999885432 23347999999999999999999875432
Q ss_pred -cCCeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC-cEE
Q 013504 173 -ERGIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-NAK 248 (441)
Q Consensus 173 -~~~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~-~~k 248 (441)
.....+++||||++ ++|.+++.. +....+++..+..++.||+.||.|||+. +|+||||||+||||+.++ .+|
T Consensus 136 ~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vk 211 (440)
T PTZ00036 136 NEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLK 211 (440)
T ss_pred CCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCcee
Confidence 22234679999996 478777653 2356799999999999999999999998 999999999999998665 699
Q ss_pred EeecCCCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhh
Q 013504 249 LSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVR 326 (441)
Q Consensus 249 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~ 326 (441)
|+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.......... .+....
T Consensus 212 L~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 212 LCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred eeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 99999998654322 22346789999999988664 68999999999999999999999997654332211 111110
Q ss_pred hhccc-----ccchhh-----hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHh
Q 013504 327 PHLTD-----AKKFTM-----ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVD 385 (441)
Q Consensus 327 ~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 385 (441)
....+ ...+.. .....+...++...+.++.+|+.+||..||.+||++.+++. +++.+.+
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 00000 000000 00001111122234578999999999999999999999996 5666544
No 117
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.2e-42 Score=335.17 Aligned_cols=249 Identities=25% Similarity=0.437 Sum_probs=194.7
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
++||+|+||.||+|.+..++.. ||+|++..... .....+.+|..++..+ +||||+++++++.... ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~-----~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~----~~ 71 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRI-----YAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES----RL 71 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC----EE
Confidence 3699999999999998876653 99999876432 2234577899999888 7999999999998765 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 999999999999999865 46799999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchh--HHHHHHhhhhhcccccchh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS--EQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 336 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||+...... ......+.....
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~------- 217 (329)
T cd05588 147 IRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI------- 217 (329)
T ss_pred ccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH-------
Confidence 2221 12345689999999999999999999999999999999999999996322111 100111110000
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC------HHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK------MSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 378 (441)
.... ...+..++..+.+++.+||+.||.+||+ +.++++
T Consensus 218 --~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 218 --LEKQ--IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred --HcCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 0000 1122235567899999999999999997 567764
No 118
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.4e-41 Score=319.38 Aligned_cols=251 Identities=25% Similarity=0.503 Sum_probs=199.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||++.+.... .+|+|.+.... .....+.+|+.+|++++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~------~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 73 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQI------KVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKP--- 73 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCc------eEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCC---
Confidence 46888899999999999999876532 38999876443 234678899999999999999999999877653
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++|+|.+++.... ..+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 74 -~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 74 -LYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred -EEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 499999999999999987542 4689999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......++..|+|||++.+..++.++||||||+++|+|++ |+.||....... ....+.... .
T Consensus 149 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~~~~i~~~~----~- 219 (256)
T cd05114 149 YVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---VVEMISRGF----R- 219 (256)
T ss_pred ccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCC----C-
Confidence 6533221 11122345678999999988889999999999999999999 899996544322 222211100 0
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
... +...+..+.+++.+||+.+|++||++.++++.|
T Consensus 220 --~~~-------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 220 --LYR-------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --CCC-------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000 112346789999999999999999999999876
No 119
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2e-41 Score=320.82 Aligned_cols=263 Identities=27% Similarity=0.462 Sum_probs=205.1
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc--C
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE--R 174 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~ 174 (441)
|.+.+.||+|+||.||+|.+..... ....||+|.+..... .....+.+|+.+++.++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDG--SQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCC--CcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 5677899999999999998765331 224599999875432 234578899999999999999999998876543 1
Q ss_pred CeeEEEEEeccCCCChHHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSR----FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
....++||||+++|+|..++... ....+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 12358999999999999998542 224689999999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||...... ....+....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~~~~- 231 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYLRHG- 231 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC-
Confidence 9999986544322222222345678999999988889999999999999999999 88999654322 222221110
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
. ....+..++..+.+++.+||..||++||++.++++.|+++
T Consensus 232 ---~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 ---N----------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---C----------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0112234567899999999999999999999999999876
No 120
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-41 Score=328.26 Aligned_cols=268 Identities=26% Similarity=0.423 Sum_probs=209.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCc--ccceeEEEEEccccC-chhhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDS--HKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
.++|.+.+.||+|+||.||++.+...... .....+|+|.+.... ......+.+|+.++..+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 35799999999999999999987543321 223459999987543 23345688899999999 899999999999876
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCC
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~ 237 (441)
+. .++||||+++|+|.+++..+. ...+++.+++.++.|++.||.|||+. +++||||||+
T Consensus 97 ~~----~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~ 169 (307)
T cd05098 97 GP----LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 169 (307)
T ss_pred Cc----eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHH
Confidence 53 499999999999999997532 13588899999999999999999987 9999999999
Q ss_pred cEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCch
Q 013504 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPK 316 (441)
Q Consensus 238 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~ 316 (441)
|||++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 99999999999999999876543221111222334578999999988889999999999999999998 88998654332
Q ss_pred hHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
.....+. .. .....+..++..+.+++.+||..+|++||++.+|++.|+.++...
T Consensus 250 ~~~~~~~---~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 250 ELFKLLK---EG--------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHH---cC--------------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 2111111 00 001122245678899999999999999999999999999988653
No 121
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2e-41 Score=319.58 Aligned_cols=255 Identities=27% Similarity=0.467 Sum_probs=204.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||+|.+..+. .||+|.+..... ....+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~------~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 73 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT------RVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE----- 73 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc------eEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCC-----
Confidence 56999999999999999999876543 389999875432 346788999999999999999999987532
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 74 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCcee
Confidence 248999999999999999765456789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......++..|+|||+..+..++.++|||||||++|+|++ |..||............. . .
T Consensus 151 ~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~---~----~--- 219 (262)
T cd05071 151 LIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE---R----G--- 219 (262)
T ss_pred eccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh---c----C---
Confidence 65433211 1223456778999999988899999999999999999999 888986554322111110 0 0
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
........++..+.+++.+|++.+|++||++.+++++|++.+
T Consensus 220 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 220 -------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred -------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 001122346678899999999999999999999999998764
No 122
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8e-42 Score=331.29 Aligned_cols=242 Identities=27% Similarity=0.468 Sum_probs=192.9
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhcc-CCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGV-VEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||+|.+..++.. ||+|.+..... .....+..|..++.. ++||||+++++++.+.+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~----~~ 71 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQF-----FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE----NL 71 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCE-----EEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC----EE
Confidence 3699999999999998876554 99999876421 223456678888876 49999999999998765 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 72 FFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 999999999999999975 35789999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+...
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i~~~---------- 211 (316)
T cd05619 147 MLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSIRMD---------- 211 (316)
T ss_pred CCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhC----------
Confidence 2221 12345679999999999999899999999999999999999999997544322 22111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH-HHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS-EVVE 378 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 378 (441)
.+ .++..++..+.+++.+||+.||++||++. ++++
T Consensus 212 -~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 212 -NP----CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -CC----CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 01 11223456788999999999999999997 5544
No 123
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.5e-42 Score=338.32 Aligned_cols=257 Identities=22% Similarity=0.355 Sum_probs=200.3
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEe
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCA 169 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 169 (441)
....++|++.+.||+|+||.||++.+..++.. +|+|.+.+... .....+.+|+.+++.++||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKV-----YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ 113 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 33457899999999999999999998876654 89999865321 22345778999999999999999999998
Q ss_pred ccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 170 EDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 170 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
... ..|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||
T Consensus 114 ~~~----~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 114 DDK----YLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred cCC----EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEE
Confidence 765 45999999999999999965 3588999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCC----CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR----LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
+|||+++...... ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||........... +
T Consensus 184 ~DFG~a~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~---i 259 (370)
T cd05621 184 ADFGTCMKMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK---I 259 (370)
T ss_pred EecccceecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH---H
Confidence 9999998654322 11234568999999999987543 78899999999999999999999975543221111 1
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCC--CCCHHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKG--RPKMSEVVEV 379 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 379 (441)
.. .. ..+.......++..+.+++..||..++.+ |+++.++++.
T Consensus 260 ~~---~~--------~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 260 MD---HK--------NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred Hh---CC--------cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00 00 00011111235677889999999855543 8899999884
No 124
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.7e-42 Score=333.74 Aligned_cols=254 Identities=28% Similarity=0.379 Sum_probs=197.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc----hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL----QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
+|++.+.||+|+||.||++...... .....||+|++.+... ...+.+..|+.++..+ +||||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGH--DTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence 5888999999999999999864321 1234599999865322 2234577899999999 5999999999887665
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 79 ----~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Df 149 (332)
T cd05614 79 ----KLHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDF 149 (332)
T ss_pred ----EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeC
Confidence 35999999999999999976 35789999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhhcc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPHLT 330 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~~~ 330 (441)
|+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|..||.......... ....+..
T Consensus 150 G~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--- 225 (332)
T cd05614 150 GLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--- 225 (332)
T ss_pred cCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc---
Confidence 99986433221 123346799999999998765 47889999999999999999999996433221111 1111100
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
.++ ..+..++..+.+++.+||..||++|| +++++++
T Consensus 226 --------~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 --------CDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred --------CCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 111 12234567789999999999999999 6778776
No 125
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.7e-42 Score=339.98 Aligned_cols=255 Identities=23% Similarity=0.348 Sum_probs=201.0
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
..++|++.+.||+|+||.||+|.+..++.. ||+|.+..... .....+.+|+.+++.++||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQV-----YAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCE-----EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 457899999999999999999998876654 99999865321 2234567899999999999999999988766
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
. ..|+||||++||+|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 116 ~----~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 K----YLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred C----EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 5 45999999999999999865 3688899999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccC----CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG----RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|..||........... +..
T Consensus 186 fG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~---i~~ 261 (370)
T cd05596 186 FGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMD 261 (370)
T ss_pred ccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHH---HHc
Confidence 999986543221 122346799999999998653 478899999999999999999999976443211111 100
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCC--CCCHHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKG--RPKMSEVVEV 379 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 379 (441)
.. ..+.......++..+.+++.+||..+|.+ ||++.+++..
T Consensus 262 ---~~--------~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 262 ---HK--------NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred ---CC--------CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 00000111135678899999999999987 9999999873
No 126
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.2e-41 Score=324.76 Aligned_cols=269 Identities=26% Similarity=0.435 Sum_probs=208.9
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCc-----------ccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeee
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDS-----------HKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVK 163 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~-----------~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~ 163 (441)
.++|++.+.||+|+||.||+|.+...+.. .....||+|.+...... ....+.+|+.++..++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 35789999999999999999988764432 13456899998765433 3467889999999999999999
Q ss_pred EEeEEeccccCCeeEEEEEeccCCCChHHHHhhcC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc
Q 013504 164 LIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF---------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234 (441)
Q Consensus 164 l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 234 (441)
+++++...+. .++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +|+||||
T Consensus 84 ~~~~~~~~~~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dl 156 (296)
T cd05051 84 LLGVCTVDPP----LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDL 156 (296)
T ss_pred EEEEEecCCC----cEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccccccc
Confidence 9999987653 499999999999999997532 12689999999999999999999988 9999999
Q ss_pred CCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh--CCCCCCC
Q 013504 235 KSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT--GRRPLDR 312 (441)
Q Consensus 235 Kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--G~~P~~~ 312 (441)
||+||+++.++.++|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred chhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999986544332233344567889999999988889999999999999999998 6788864
Q ss_pred CCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 313 NRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
..... .+........... .......+..++.++.+++.+||+.||++||++.+|++.|+
T Consensus 237 ~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 237 LTDQQ---VIENAGHFFRDDG-------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cChHH---HHHHHHhcccccc-------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 43222 2221111110000 00001112235578999999999999999999999999885
No 127
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=304.28 Aligned_cols=271 Identities=24% Similarity=0.322 Sum_probs=215.2
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
...++|.+.+.||.|||+-||+++...++.. +|+|++.-....+.+..++|++..++++||||++++++...+..
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~-----YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHL-----YALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccc-----hhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 3457899999999999999999997776665 99999987777778889999999999999999999988765443
Q ss_pred -CCeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 174 -RGIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 174 -~~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
.....||+++|...|+|.+.+... .+..+++.+++.|+.+|++||.+||.. .++.+||||||.|||+.+.+.++|.
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~ 171 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLM 171 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEE
Confidence 334579999999999999998743 345799999999999999999999987 3469999999999999999999999
Q ss_pred ecCCCCCCCCCCCcc-------eeeceecccCcCCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH
Q 013504 251 DFGLARLGPSDGLSH-------VSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK 320 (441)
Q Consensus 251 DFGla~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~ 320 (441)
|||.+....-.-... .......|..|.|||.+.- ...+.++|||||||+||.|+.|..||+.....
T Consensus 172 D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---- 247 (302)
T KOG2345|consen 172 DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---- 247 (302)
T ss_pred eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc----
Confidence 999988643221110 1123467899999998864 45688999999999999999999999632110
Q ss_pred HHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 321 LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
.+.....+..+.........++..+.++++.||+.||.+||++.+++..+++++
T Consensus 248 ----------GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 ----------GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ----------CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 011111112222222222347889999999999999999999999999998875
No 128
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.3e-41 Score=326.20 Aligned_cols=267 Identities=25% Similarity=0.440 Sum_probs=209.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCC--CcccceeEEEEEccccC-chhhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTE--DSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~--~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
..+|.+.+.||+|+||.||+|.+.... .......+++|.+.... ......+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 467889999999999999999864321 12233468999887543 23346788999999999 899999999999876
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCC
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~ 237 (441)
.. .++||||+++|+|.+++..+. ...+++..++.++.||+.||.|||++ +|+||||||+
T Consensus 94 ~~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 166 (304)
T cd05101 94 GP----LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAAR 166 (304)
T ss_pred Cc----eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccc
Confidence 53 499999999999999997532 23578889999999999999999998 9999999999
Q ss_pred cEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCch
Q 013504 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPK 316 (441)
Q Consensus 238 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~ 316 (441)
|||++.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 99999999999999999986544332222333456778999999988889999999999999999998 78888654322
Q ss_pred hHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
. ....+.. .. ....+..++..+.+++.+||..+|.+||++.++++.|++++.-
T Consensus 247 ~---~~~~~~~----~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 247 E---LFKLLKE----GH----------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred H---HHHHHHc----CC----------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2 2211110 00 0011224567899999999999999999999999999998754
No 129
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.2e-42 Score=331.64 Aligned_cols=241 Identities=26% Similarity=0.473 Sum_probs=192.4
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||+|.+..++.. ||+|.+..... .....+..|..++..+ +||||+++++++...+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~----~~ 71 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEY-----FAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE----HL 71 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC----EE
Confidence 3699999999999998876653 99999875421 2334566788888764 8999999999998765 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|..++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 72 FFVMEFLNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEECCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 999999999999999876 36789999999999999999999998 9999999999999999999999999998743
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|||++|..||...... .....+...
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~~~~~~---------- 211 (316)
T cd05620 147 VFGD--NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFESIRVD---------- 211 (316)
T ss_pred ccCC--CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhC----------
Confidence 2211 1234568999999999999999999999999999999999999999754432 222211110
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH-HHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS-EVV 377 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 377 (441)
.+ .++..++..+.+++.+||+.||++||++. +++
T Consensus 212 -~~----~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 212 -TP----HYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -CC----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 01 11123456788999999999999999984 555
No 130
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.6e-42 Score=333.33 Aligned_cols=244 Identities=27% Similarity=0.453 Sum_probs=190.5
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||+|.+..++.. +|+|++..... .....+.+|+.++.++ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~----~~ 71 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERI-----YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----RL 71 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC----EE
Confidence 3699999999999998877654 99999876422 2334567888888776 8999999999988765 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
++||||+++|+|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~E~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 999999999999998865 46799999999999999999999998 9999999999999999999999999999753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchh--HHHHHHhhhhhcccccchh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS--EQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 336 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ......+....
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------- 216 (329)
T cd05618 147 LRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------- 216 (329)
T ss_pred cCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH--------
Confidence 3221 12345689999999999999999999999999999999999999995321110 00001111000
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
+.... ...+..++..+.+++.+||..||++||++
T Consensus 217 -i~~~~--~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 217 -ILEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -HhcCC--CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 00000 11233456778899999999999999984
No 131
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.1e-41 Score=316.98 Aligned_cols=250 Identities=30% Similarity=0.477 Sum_probs=201.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||+|...+. .+++|.+.... ..+.+.+|+.++++++|+||+++++++...+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-------~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--- 73 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGN-------KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG--- 73 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCC-------cEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC---
Confidence 5788999999999999999976543 38999886443 34578899999999999999999998755432
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++..+....+++..++.++.|++.||.|||++ +|+||||||+||++++++.+||+|||+++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 74 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccce
Confidence 358999999999999999876555689999999999999999999998 99999999999999999999999999988
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
..... .....++..|+|||++.+..++.++|||||||++|+|++ |+.||....... ....+...
T Consensus 151 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~~~------- 215 (256)
T cd05082 151 EASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEKG------- 215 (256)
T ss_pred ecccc-----CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhcC-------
Confidence 54332 122345678999999998889999999999999999998 999996543221 11111110
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
.....+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 216 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 216 -------YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00111224567889999999999999999999999998753
No 132
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.3e-41 Score=326.24 Aligned_cols=262 Identities=27% Similarity=0.476 Sum_probs=204.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|.+..++. ...+++|.+.... ......+.+|+.++.++ +||||+++++++...+.
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~---~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~- 82 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGL---RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY- 82 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCc---eeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC-
Confidence 578899999999999999999865542 2236777766432 22345788899999999 89999999999977654
Q ss_pred CeeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEE
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NIL 240 (441)
.++||||+++++|.+++.... ...+++..++.++.|++.||.|||++ +|+||||||+|||
T Consensus 83 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nil 156 (303)
T cd05088 83 ---LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 156 (303)
T ss_pred ---ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEE
Confidence 499999999999999996432 23578999999999999999999988 9999999999999
Q ss_pred EcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHH
Q 013504 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQ 319 (441)
Q Consensus 241 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~ 319 (441)
++.++.+||+|||+++..... .......++..|+|||++.+..++.++|||||||++|||+| |..||........
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 232 (303)
T cd05088 157 VGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL- 232 (303)
T ss_pred ecCCCcEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH-
Confidence 999999999999998742211 11112234668999999988889999999999999999998 9999965433221
Q ss_pred HHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhhc
Q 013504 320 KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAAE 388 (441)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 388 (441)
....... .....+..++..+.+++.+||+.+|++||++.+++..|..++....
T Consensus 233 --~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 233 --YEKLPQG--------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred --HHHHhcC--------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 1111100 0001112345678999999999999999999999999999876554
No 133
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=9e-42 Score=331.30 Aligned_cols=242 Identities=26% Similarity=0.466 Sum_probs=195.1
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||+|.+..++.. ||+|++..... .....+.+|..++..+ +||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~----~~ 71 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDEL-----YAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD----RL 71 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC----EE
Confidence 3699999999999998776553 99999875422 2345567899999887 7999999999987765 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|..++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 72 FFVMEYVNGGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 999999999999999876 35799999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+..
T Consensus 147 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~~~i~~----------- 210 (318)
T cd05570 147 ILGG--VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LFQSILE----------- 210 (318)
T ss_pred CcCC--CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HHHHHHc-----------
Confidence 2221 12334679999999999999999999999999999999999999997544221 1111110
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH-----HHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM-----SEVVE 378 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 378 (441)
. ...++..++..+.+++.+||..||.+||++ .+++.
T Consensus 211 --~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 211 --D--EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred --C--CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0 001122356778999999999999999999 77765
No 134
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.8e-41 Score=323.46 Aligned_cols=276 Identities=25% Similarity=0.401 Sum_probs=205.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|++.+.||+|+||.||+|....... .....|++|.+........+.+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQD-NTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR-- 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcC-CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC--
Confidence 578899999999999999998643211 12335999998776655567888999999999999999999988654432
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccc
Confidence 358999999999999999753 34689999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcc-eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc---cc
Q 013504 257 LGPSDGLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT---DA 332 (441)
Q Consensus 257 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~---~~ 332 (441)
......... ......++..|+|||++.+..++.++|||||||++|||++|..|+...... .......... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 232 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQGQMIV 232 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccccccch
Confidence 754432111 111223445699999999889999999999999999999998776432111 0000000000 00
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
......+........+..++..+.+++.+||..+|++|||+.+|++.|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000001111111112234567899999999999999999999999999865
No 135
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=3.5e-41 Score=317.31 Aligned_cols=253 Identities=28% Similarity=0.472 Sum_probs=202.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|++.+.||+|+||.||+|...... .+++|.+..... ....+.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~----- 73 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNT------KVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEE----- 73 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCc------eeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCC-----
Confidence 57889999999999999999876433 389998876443 345788999999999999999999987532
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.......+++..++.++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 74 PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeee
Confidence 248999999999999999765456789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......++..|+|||++.+..++.++||||||+++|+|++ |..||....... ........
T Consensus 151 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~------- 219 (260)
T cd05070 151 LIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLEQVERG------- 219 (260)
T ss_pred eccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHcC-------
Confidence 65432211 1122345678999999988889999999999999999999 899996543322 11111100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.....+...+..+.+++.+||..+|.+||++.+++++|++
T Consensus 220 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 220 -------YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -------CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111223456779999999999999999999999999875
No 136
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.2e-41 Score=335.87 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=200.5
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
...+|.+.+.||+|+||.||+|...+.. ....|++|.+... ....+|+.+|+.++||||+++++++....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~---~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~-- 159 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDE---QRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS-- 159 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCc---cceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC--
Confidence 3467999999999999999999865432 2345889987643 23458999999999999999999987655
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..|+|||++. ++|.+++.. ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.++|+|||+
T Consensus 160 --~~~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~ 231 (392)
T PHA03207 160 --TVCMVMPKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGA 231 (392)
T ss_pred --EEEEEehhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcc
Confidence 3599999994 789998844 46899999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc---
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD--- 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--- 331 (441)
++...............||+.|+|||++.+..++.++|||||||++|||++|+.||...........+..+...+..
T Consensus 232 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~ 311 (392)
T PHA03207 232 ACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPL 311 (392)
T ss_pred ccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcc
Confidence 97654433222334568999999999999999999999999999999999999999654432211111111000000
Q ss_pred ----cc---------chhhhcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 332 ----AK---------KFTMILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 332 ----~~---------~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. .+.....+.... .....++..+.++|.+||..||++||++.+++..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 312 EFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000000000 0001235578899999999999999999999984
No 137
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.2e-41 Score=323.86 Aligned_cols=268 Identities=24% Similarity=0.420 Sum_probs=203.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCC---------cccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTED---------SHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIG 166 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~---------~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~ 166 (441)
++|++.+.||+|+||.||+|....+.. ......||+|.+...... ....+.+|+.++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999998764321 122345899998754322 2356889999999999999999999
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhhcC----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCC
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF----------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp 236 (441)
++..... .++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++||||||
T Consensus 85 ~~~~~~~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp 157 (295)
T cd05097 85 VCVSDDP----LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLAT 157 (295)
T ss_pred EEcCCCc----cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccCh
Confidence 9987654 499999999999999986431 12468889999999999999999998 999999999
Q ss_pred CcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh--CCCCCCCCC
Q 013504 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT--GRRPLDRNR 314 (441)
Q Consensus 237 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--G~~P~~~~~ 314 (441)
+|||+++++.+||+|||+++...............++..|+|||++.++.++.++|||||||++|+|++ |..||....
T Consensus 158 ~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 158 RNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred hhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999999986543322222233455778999999988899999999999999999998 667876543
Q ss_pred chhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
..... ............ ......+..++..+.+++.+||+.+|++||++.+|++.|+
T Consensus 238 ~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 238 DEQVI---ENTGEFFRNQGR-------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred hHHHH---HHHHHhhhhccc-------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 32211 111110000000 0000111234578999999999999999999999999885
No 138
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=309.72 Aligned_cols=255 Identities=25% Similarity=0.368 Sum_probs=204.6
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++.|++.+.||+|.|+.||++.+..++.....+.+-+|++... ..+++.+|++|-+.|+|||||+|.+.+.+...
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~---~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~- 84 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR---DFQKLEREARICRKLQHPNIVRLHDSIQEESF- 84 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc---cHHHHHHHHHHHHhcCCCcEeehhhhhcccce-
Confidence 45678888899999999999999988877633333333333332 46788899999999999999999988876653
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC---CCcEEEee
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE---QWNAKLSD 251 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~---~~~~kl~D 251 (441)
.|||+|++.|++|..-|..+ ..+++..+-.+++||+.+|.|+|.+ +|||||+||+|+||-. ..-+||+|
T Consensus 85 ---~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~ 156 (355)
T KOG0033|consen 85 ---HYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLAD 156 (355)
T ss_pred ---eEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecc
Confidence 49999999999999888765 5678888999999999999999998 9999999999999943 34489999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
||+|..+.. .......+|||+|||||++...+|+..+|||+.|||||-||.|.+||.+.... .+.+.+...
T Consensus 157 FGvAi~l~~---g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rlye~I~~g--- 227 (355)
T KOG0033|consen 157 FGLAIEVND---GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYEQIKAG--- 227 (355)
T ss_pred cceEEEeCC---ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHHHHHhcc---
Confidence 999997763 23445689999999999999999999999999999999999999999753221 222222111
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+-...+.+...++++..+|+++||..||.+|.|+.|.|.
T Consensus 228 --------~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 228 --------AYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred --------ccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 011223345567889999999999999999999999886
No 139
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.4e-42 Score=332.24 Aligned_cols=238 Identities=27% Similarity=0.425 Sum_probs=188.8
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHH-HhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVN-VLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||+||+|.+..++.. ||+|++...... ....+..|.. +++.++||||+++++++...+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~----~~ 71 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKF-----YAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD----KL 71 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC----EE
Confidence 3699999999999998776653 999998754321 2234555555 467799999999999987765 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
++||||+++|+|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 72 YFVLDYVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred EEEEcCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 999999999999999976 46789999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+. .
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---~~~~i~---~-------- 210 (323)
T cd05575 147 IEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYDNIL---N-------- 210 (323)
T ss_pred ccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH---HHHHHH---c--------
Confidence 3221 12344679999999999999999999999999999999999999997543221 111110 0
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 374 (441)
... ..+...+..+.+++.+||+.||.+||++.
T Consensus 211 --~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 211 --KPL--RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --CCC--CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 000 11123467789999999999999999985
No 140
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.2e-41 Score=319.15 Aligned_cols=267 Identities=24% Similarity=0.391 Sum_probs=210.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|.+.+.||+|+||.||+|.+..+. ......|++|.+..... .....+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~- 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEK-PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE- 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC-
Confidence 467899999999999999999987632 12234588998865432 234668899999999999999999999876432
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEE
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQ------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~k 248 (441)
..++++||+++++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||++++++.+|
T Consensus 83 --~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 83 --PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred --CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEE
Confidence 34899999999999999865322 4689999999999999999999988 999999999999999999999
Q ss_pred EeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhh
Q 013504 249 LSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 249 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 327 (441)
|+|||+++...............++..|+|||++.+..++.++|||||||++||+++ |+.||....+.. ...+...
T Consensus 158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~ 234 (280)
T cd05043 158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLKD 234 (280)
T ss_pred ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHHc
Confidence 999999986543322222233456778999999988889999999999999999999 999997654322 2222211
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
.. .......++..+.+++.+||..+|++||++.++++.|+++.+.
T Consensus 235 ~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 235 GY--------------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CC--------------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 10 0011123456789999999999999999999999999988653
No 141
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.6e-41 Score=316.78 Aligned_cols=252 Identities=28% Similarity=0.476 Sum_probs=200.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||+|.+.+.. .+|+|.+.... .....+.+|+.++.+++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~------~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 73 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQY------DVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRP--- 73 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCC------cEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCC---
Confidence 46888899999999999999875532 38999887543 234678899999999999999999999976654
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++|+|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+|||++.++.+||+|||+++
T Consensus 74 -~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 74 -IYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred -cEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 49999999999999999754 23789999999999999999999998 99999999999999999999999999988
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......++..|+|||++.+..++.++|||||||++|+|++ |..||......... ..+.....
T Consensus 149 ~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~---~~~~~~~~----- 219 (256)
T cd05113 149 YVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV---EKVSQGLR----- 219 (256)
T ss_pred ecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH---HHHhcCCC-----
Confidence 6543221 11122345678999999988889999999999999999998 99999654432211 11110000
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
...+...+..+.+++.+||+.+|.+||++.+|+..|+
T Consensus 220 ---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 ---------LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0011123567899999999999999999999998763
No 142
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.2e-41 Score=322.63 Aligned_cols=245 Identities=27% Similarity=0.405 Sum_probs=194.6
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||+|+||+||++.+..++.. +|+|.+...... ....+..|+.+++.++||||+++.+++.... ..++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~----~~~lv 71 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKL-----YACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT----DLCLV 71 (280)
T ss_pred CCCCCceeEEEEEEccCCcE-----EEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC----eEEEE
Confidence 79999999999998776553 999998754332 2345678999999999999999999887665 35999
Q ss_pred EeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
|||+++|+|..++... ....+++..+..++.||+.||.|||++ +|+||||||+||+++.++.++|+|||++....
T Consensus 72 ~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 72 MTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred EeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 9999999999887532 245789999999999999999999998 99999999999999999999999999997654
Q ss_pred CCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhH-HHHHHhhhhhcccccchhhh
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSE-QKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......
T Consensus 149 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~------------- 213 (280)
T cd05608 149 DGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI------------- 213 (280)
T ss_pred CCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh-------------
Confidence 3221 22346799999999999999999999999999999999999999975432211 1111110
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
.... ..++..++..+.+++.+||+.||++|| +++++++
T Consensus 214 ~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 214 LNDS--VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred cccC--CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 0000 112334667899999999999999999 6677776
No 143
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.6e-41 Score=315.31 Aligned_cols=250 Identities=28% Similarity=0.437 Sum_probs=204.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|.+.+.||+|+||.||+|.+..++.. |++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~-----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRV-----YAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG--- 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcE-----EEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC---
Confidence 478888999999999999998766543 8999876543 234567889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++
T Consensus 73 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 73 -KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred -EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 459999999999999999875567899999999999999999999988 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
+....... ......|++.|+|||++.+..++.++|||||||++++|++|..||...... .........
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~------- 216 (256)
T cd08529 149 KLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALILKIIRG------- 216 (256)
T ss_pred eeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcC-------
Confidence 86543321 223457899999999999989999999999999999999999999755421 111111100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.....+..++..+.+++.+||+.+|++||++.++++
T Consensus 217 -------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 217 -------VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred -------CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 011122245678999999999999999999999986
No 144
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4e-41 Score=316.35 Aligned_cols=251 Identities=27% Similarity=0.470 Sum_probs=199.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|.+.+.||+|+||.||+|.+.... .+|+|.+..... ....+.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~------~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--- 73 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKI------DVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRP--- 73 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCc------cEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc---
Confidence 35788889999999999999876432 389998865432 34568889999999999999999999876653
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++++|.+++..+ ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 74 -~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 74 -IFIVTEYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred -eEEEEecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 49999999999999999754 24789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.......... .....
T Consensus 149 ~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~---~~~~~------- 217 (256)
T cd05059 149 YVLDDQYT-SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVE---SVSAG------- 217 (256)
T ss_pred eccccccc-ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHH---HHHcC-------
Confidence 65432111 1112234567999999998899999999999999999999 899997544322111 11100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
. ....+..++..+.+++.+||..+|++||++.++++.|
T Consensus 218 ---~----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 ---Y----RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---C----cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0 0011123567899999999999999999999999876
No 145
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-41 Score=324.01 Aligned_cols=267 Identities=25% Similarity=0.456 Sum_probs=207.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCC--cccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTED--SHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
.++|.+.+.||+|+||.||+|....... ......+|+|.+..... .....+..|+.+++.+ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 3578899999999999999998654322 12344589998875432 2345678899999999 699999999998765
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCC
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~ 237 (441)
.. .++||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+
T Consensus 91 ~~----~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~ 163 (314)
T cd05099 91 GP----LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAAR 163 (314)
T ss_pred Cc----eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccce
Confidence 53 499999999999999996532 23588899999999999999999998 9999999999
Q ss_pred cEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCch
Q 013504 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPK 316 (441)
Q Consensus 238 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~ 316 (441)
|||++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 164 NVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred eEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999986543221111122334567999999988899999999999999999999 88999654432
Q ss_pred hHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
..... .... . ....+..++..+.+++.+||..+|++||++.++++.|+++...
T Consensus 244 ~~~~~---~~~~----~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 244 ELFKL---LREG----H----------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HHHHH---HHcC----C----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 22211 1110 0 0011224456788999999999999999999999999998754
No 146
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-42 Score=305.20 Aligned_cols=260 Identities=27% Similarity=0.409 Sum_probs=209.9
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch----h----hHHHHHHHHHhccC-CCCCeee
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ----G----HKEWVTEVNVLGVV-EHPNLVK 163 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----~----~~~~~~E~~il~~l-~hpnIv~ 163 (441)
+..-+.|...+.||+|..++|-++.++.++.. +|+|++...... . .+.-.+|+.||+++ .||+|+.
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e-----~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~ 87 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKE-----FAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIID 87 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccc-----eeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 44557788899999999999999999888765 888887542211 1 23446799999997 7999999
Q ss_pred EEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC
Q 013504 164 LIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243 (441)
Q Consensus 164 l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~ 243 (441)
+.+++..+.. .++|+|.|+.|.|.++|.. ...+++.....|++|+..|+.|||.+ +||||||||+|||+++
T Consensus 88 l~D~yes~sF----~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 88 LQDVYESDAF----VFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred eeeeccCcch----hhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 9999988764 4999999999999999987 46899999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc------CCCCccccchhHHHHHHHHHhCCCCCCCCCchh
Q 013504 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT------GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317 (441)
Q Consensus 244 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~ 317 (441)
|.++||+|||++....... .....+|||+|+|||.+.. ..|+..+|+|++|||+|-||.|.+||-.-....
T Consensus 159 n~~i~isDFGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml 235 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML 235 (411)
T ss_pred ccceEEeccceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH
Confidence 9999999999999876543 3456899999999998854 457889999999999999999999994221100
Q ss_pred HHHHHHhhhhhcccccchhhhcCCC--CCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHh
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPK--LEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVD 385 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 385 (441)
.+..++... +......+.+....+||.+||+.||.+|.|++|+|+ ++..+..
T Consensus 236 ----------------MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 236 ----------------MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred ----------------HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence 111111111 122334577889999999999999999999999998 4544443
No 147
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6.5e-41 Score=315.09 Aligned_cols=249 Identities=24% Similarity=0.423 Sum_probs=196.7
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
.||+|+||.||+|.+..... ...+|+|++..... ...+.+.+|+.+++.+.||||+++++++... ..++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~lv 73 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKS---EKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE-----SWMLV 73 (257)
T ss_pred cCCCcCCcceEEeEEecCCC---ceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CcEEE
Confidence 58999999999998653322 23599999865432 2346788999999999999999999988543 24899
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||.|||++.++.+||+|||+++.....
T Consensus 74 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~ 148 (257)
T cd05116 74 MELAELGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD 148 (257)
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence 999999999999975 35789999999999999999999998 9999999999999999999999999999865433
Q ss_pred CCcc-eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 262 GLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 262 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
.... ......++..|+|||.+....++.++|||||||++|||++ |..||........ ...+...
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~i~~~----------- 214 (257)
T cd05116 149 ENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV---TQMIESG----------- 214 (257)
T ss_pred CCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHCC-----------
Confidence 2111 1122334678999999988889999999999999999998 9999976543322 2221110
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.....+..++..+.++|.+||+.||++||++.+|...|++
T Consensus 215 ---~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 215 ---ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 0011222456789999999999999999999999999875
No 148
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.2e-41 Score=316.23 Aligned_cols=259 Identities=24% Similarity=0.407 Sum_probs=206.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|+...++. .||||.+..... .....+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRK-----PVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN- 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCC-----EEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-
Confidence 478999999999999999999876654 389998764322 22356788999999999999999999988665
Q ss_pred CCeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
..++||||+++|+|.+++... ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|
T Consensus 76 ---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d 149 (267)
T cd08228 76 ---ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ---eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECc
Confidence 348999999999999988532 234688999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
||++....... .......|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ......+..
T Consensus 150 ~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~~~~~~~~~---- 222 (267)
T cd08228 150 LGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-FSLCQKIEQ---- 222 (267)
T ss_pred cccceeccchh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-HHHHHHHhc----
Confidence 99988654322 11234578899999999988889999999999999999999999996443211 111111110
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
..........++..+.+++.+||..+|++||++.+|++.|+.+
T Consensus 223 ---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 223 ---------CDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ---------CCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 0001112234567899999999999999999999999999875
No 149
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.1e-41 Score=320.24 Aligned_cols=245 Identities=27% Similarity=0.427 Sum_probs=193.9
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||+|+||.||++....++.. +|+|.+...... ....+..|+.+++.++||||+++++++.... ..++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~-----~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~----~~~lv 71 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKM-----YACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT----HLCLV 71 (277)
T ss_pred CCCCCceEEEEEEEccCCcE-----EEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC----eEEEE
Confidence 79999999999998776554 999988653322 2234567999999999999999999987655 45999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||++|++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++......
T Consensus 72 ~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 72 MSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred EecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 9999999999998765556789999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhH-HHHHHhhhhhcccccchhhhcC
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSE-QKLLEWVRPHLTDAKKFTMILD 340 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 340 (441)
. ......||+.|+|||++.+..++.++|||||||++|||++|..||........ ..... .....
T Consensus 149 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~---~~~~~--------- 213 (277)
T cd05607 149 K---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR---RTLED--------- 213 (277)
T ss_pred c---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH---Hhhcc---------
Confidence 1 22345789999999999988899999999999999999999999965432111 11111 11100
Q ss_pred CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 341 PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 341 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
... .....++.++.+++.+||+.||++||++.++++
T Consensus 214 -~~~-~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 214 -EVK-FEHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred -ccc-cccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 000 011235677899999999999999999987764
No 150
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.5e-41 Score=330.31 Aligned_cols=268 Identities=24% Similarity=0.293 Sum_probs=199.6
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
..++|++.+.||+|+||.||+|.+..++. .||+|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGI-----NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCc-----eeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence 45789999999999999999999876654 49999986542 233466789999999999999999999987554
Q ss_pred cC--CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 173 ER--GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 173 ~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
.. ....|+||||+++ +|.+.+. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 94 SLEEFQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred CccccceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 21 1246999999965 6766663 3578899999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhh----
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWV---- 325 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~---- 325 (441)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .....
T Consensus 166 Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 242 (359)
T cd07876 166 DFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242 (359)
T ss_pred cCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 99999854322 12334678999999999999999999999999999999999999997554321110 00000
Q ss_pred -----------hhhccccc-----chhhhcCCCC---CCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 326 -----------RPHLTDAK-----KFTMILDPKL---EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 326 -----------~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........ .+........ ........+..+.+++.+||+.||++||++.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0000000000 00011123467889999999999999999999998
No 151
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.9e-41 Score=316.93 Aligned_cols=260 Identities=25% Similarity=0.478 Sum_probs=205.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|++.+.||+|+||.||+|.+..++.. ...|+||.+.... ......+..|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~-- 79 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP-- 79 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCC--ceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCc--
Confidence 4578889999999999999998765431 3458999987542 2234678899999999999999999999876653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|.+++... ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++
T Consensus 80 --~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~ 153 (269)
T cd05065 80 --VMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLS 153 (269)
T ss_pred --eEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccc
Confidence 49999999999999999754 35689999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceee-ce--ecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 256 RLGPSDGLSHVST-AV--VGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 256 ~~~~~~~~~~~~~-~~--~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
............. .. ..+..|+|||++.+..++.++|||||||++|||++ |..||...... ....++....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~~~-- 228 (269)
T cd05065 154 RFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQDY-- 228 (269)
T ss_pred cccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCC--
Confidence 7654322111111 11 12457999999998999999999999999999886 99999654432 2222221110
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
....+.+++..+.+++.+||..+|++||++.+|+..|+++
T Consensus 229 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 ------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111224566789999999999999999999999999875
No 152
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.8e-41 Score=315.03 Aligned_cols=250 Identities=30% Similarity=0.507 Sum_probs=204.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|++.+.||+|+||.||+|...+. .|++|.+..... ..+++.+|+.+++.++|+||+++++++...+.
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~-------~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-- 74 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQ-------KVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNP-- 74 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCc-------EEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCC--
Confidence 35788999999999999999987532 399999976654 45778899999999999999999999886443
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++
T Consensus 75 --~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 75 --LYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred --eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 49999999999999999875555799999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+...... ....++..|+|||++....++.++||||||+++++|++ |..||....... +.......
T Consensus 150 ~~~~~~~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~~------ 215 (256)
T cd05039 150 KEASQGQ-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHVEKG------ 215 (256)
T ss_pred ccccccc-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHhcC------
Confidence 8653221 12345678999999988889999999999999999997 999996543322 11111110
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.....+..+++.+.+++.+||..+|++||++.+++++|+.
T Consensus 216 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 216 --------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred --------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0011122356789999999999999999999999999975
No 153
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.6e-41 Score=328.73 Aligned_cols=242 Identities=25% Similarity=0.452 Sum_probs=194.0
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCC-CCCeeeEEeEEecccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDE 173 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 173 (441)
+|...+.||+|+||.||+|.+..++.. ||+|++..... ...+.+..|..++..+. |++|+++++++...+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDEL-----YAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD- 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-
Confidence 477889999999999999998776653 99999875422 22355778899998885 578888988887765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++.. ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~Ey~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 75 ---RLYFVMEYVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---EEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 35999999999999999875 36799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+...
T Consensus 147 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~~i~~~----- 216 (323)
T cd05615 147 MCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LFQSIMEH----- 216 (323)
T ss_pred cccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHHhC-----
Confidence 988543221 12334679999999999999999999999999999999999999997654321 11111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
...++..++..+.+++.+||+.+|.+|++.
T Consensus 217 ----------~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 217 ----------NVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----------CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 011223455678899999999999999985
No 154
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.8e-41 Score=320.56 Aligned_cols=269 Identities=25% Similarity=0.352 Sum_probs=199.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccC---CCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVV---EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~ 172 (441)
+|++.+.||+|+||.||+|.+..++.. ||+|.+...... ....+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~ 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHF-----VALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcE-----EEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc
Confidence 488889999999999999998877654 999988754322 123456777777665 7999999999886532
Q ss_pred c-CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 173 E-RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 173 ~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
. .....++||||++ ++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 76 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~d 151 (288)
T cd07863 76 TDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLAD 151 (288)
T ss_pred CCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECc
Confidence 2 2234689999997 5899998765556689999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhhcc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPHLT 330 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~~ 330 (441)
||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|.+||......... ...........
T Consensus 152 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 152 FGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred cCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 99998654321 123457899999999999889999999999999999999999999655433221 11111100000
Q ss_pred ccc----c-hhhhcCCCCC---CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAK----K-FTMILDPKLE---GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~----~-~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
... . ......+... ......++..+.+++.+||+.||++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 0 0000000000 0111235667899999999999999999999885
No 155
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.9e-41 Score=316.26 Aligned_cols=262 Identities=24% Similarity=0.491 Sum_probs=206.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|...+.||+|+||.||+|....++. ....+++|.+.... ......+..|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~- 80 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGR--KEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP- 80 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCC--CceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC-
Confidence 3578888999999999999999865432 12358999886543 2334678899999999999999999999987664
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 81 ---~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 81 ---AMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred ---cEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcc
Confidence 49999999999999999754 35789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcce-eeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 255 ARLGPSDGLSHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 255 a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
+........... ......+..|+|||++.+..++.++|||||||++|||++ |..||....... ....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~~i~~~---- 226 (268)
T cd05063 154 SRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMKAINDG---- 226 (268)
T ss_pred ceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHHHhcC----
Confidence 986543221111 111223457999999988889999999999999999998 999996543322 11111110
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
........++..+.+++.+||..+|++||++.+|++.|++++
T Consensus 227 ----------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 227 ----------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 000112235577899999999999999999999999998763
No 156
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2e-41 Score=330.05 Aligned_cols=244 Identities=26% Similarity=0.421 Sum_probs=191.2
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
++||+|+||.||+|....++.. +|+|++..... ...+.+.+|+.++.++ +||||+++++++.... ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~ 71 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQI-----YAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS----RL 71 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC----EE
Confidence 3699999999999998776553 99999876432 2235577899999888 6999999999987665 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 999999999999998865 35799999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.............+.... +
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~---------~ 215 (327)
T cd05617 147 LGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQV---------I 215 (327)
T ss_pred cCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHH---------H
Confidence 2221 1234568999999999999999999999999999999999999999643221111111111000 0
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
.... ...+...+..+.+++.+||..||.+|+++
T Consensus 216 ~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 216 LEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0000 11223355678899999999999999985
No 157
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.6e-41 Score=315.45 Aligned_cols=254 Identities=28% Similarity=0.476 Sum_probs=204.3
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|++.++||+|+||.||+|..... ..+|+|.+..... ....+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~------~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 73 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGH------TKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQE---- 73 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCC------ceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEccC----
Confidence 46799999999999999999986543 2499999875443 346788999999999999999999987432
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++....+..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++
T Consensus 74 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 74 -PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred -CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 249999999999999999765566889999999999999999999987 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
........ .......++..|+|||++....++.++||||||+++|||++ |+.||........... .....
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~---~~~~~----- 220 (260)
T cd05067 150 RLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN---LERGY----- 220 (260)
T ss_pred eecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH---HHcCC-----
Confidence 76542221 11223456778999999988889999999999999999999 9999975443222111 11000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
....+...+..+.+++.+||..+|++||++++++..|++
T Consensus 221 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 ---------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 001122345679999999999999999999999999875
No 158
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.7e-41 Score=334.59 Aligned_cols=260 Identities=23% Similarity=0.349 Sum_probs=201.4
Q ss_pred HHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEe
Q 013504 90 SELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIG 166 (441)
Q Consensus 90 ~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~ 166 (441)
.++....++|++.+.||+|+||.||+|.+..++.. +|+|++..... .....+.+|+.+++.++||||+++++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~-----~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~ 110 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV-----YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 110 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcE-----EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 34445568999999999999999999998877654 89999865322 22345678999999999999999999
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~ 246 (441)
++.... ..|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.
T Consensus 111 ~~~~~~----~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ 180 (371)
T cd05622 111 AFQDDR----YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 180 (371)
T ss_pred EEEcCC----EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCC
Confidence 987655 45999999999999999865 3588899999999999999999998 9999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCC----CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 013504 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR----LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~ 322 (441)
+||+|||+++...... ........||+.|+|||++.+.. ++.++|||||||++|||++|..||...........
T Consensus 181 ikL~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~- 258 (371)
T cd05622 181 LKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK- 258 (371)
T ss_pred EEEEeCCceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH-
Confidence 9999999998654322 11234568999999999987543 78899999999999999999999975443221111
Q ss_pred HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCC--CCCHHHHHHH
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKG--RPKMSEVVEV 379 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 379 (441)
+.. .. ..+.......++..+.+++..||..++.+ |+++.++++.
T Consensus 259 --i~~---~~--------~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 259 --IMN---HK--------NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred --HHc---CC--------CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 100 00 00011111245677889999999844433 7899998884
No 159
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.1e-41 Score=322.33 Aligned_cols=264 Identities=28% Similarity=0.480 Sum_probs=207.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|+..+.||+|+||.||+|.+..++... ...+|+|.+....... ...+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--- 82 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETV-KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT--- 82 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcc-eeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC---
Confidence 56888899999999999999987665432 3458999887544322 346789999999999999999999987543
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++++||+++|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 83 --~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~ 156 (303)
T cd05110 83 --IQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLA 156 (303)
T ss_pred --ceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccc
Confidence 37899999999999998754 34688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+...............++..|+|||++.+..++.++|||||||++|||++ |..||...........+. .. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~---~~----~~ 229 (303)
T cd05110 157 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE---KG----ER 229 (303)
T ss_pred ccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---CC----CC
Confidence 86543322212223456778999999998899999999999999999997 899996543322222211 10 00
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
...+..++..+.+++..||..+|++||++.++++.|..+.+..
T Consensus 230 ----------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 230 ----------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 0011123457889999999999999999999999999886543
No 160
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-40 Score=328.76 Aligned_cols=261 Identities=22% Similarity=0.353 Sum_probs=193.1
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
...+|.+.+.||+|+||.||+|....++.. ||+|..... ....|+.++++++||||+++++++.....
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~- 131 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDP-----VVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAI- 131 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCce-----EEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCe-
Confidence 346799999999999999999998776543 888875432 23469999999999999999999987653
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++||||+ .++|.+++... ...+++..++.|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 132 ---~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 132 ---TCMVLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred ---eEEEEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcc
Confidence 48999999 56898888653 46799999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCC-CCCCchhH-------HHHHHhhh
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPL-DRNRPKSE-------QKLLEWVR 326 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~-~~~~~~~~-------~~~~~~~~ 326 (441)
++..... .......||+.|+|||++.+..++.++|||||||++|||+++..|+ ........ ..+...+.
T Consensus 204 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~ 280 (357)
T PHA03209 204 AQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIIS 280 (357)
T ss_pred ccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHH
Confidence 9753221 1223467999999999999999999999999999999999965554 33221111 11111111
Q ss_pred hhcccccch---------hhhcC------CCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 327 PHLTDAKKF---------TMILD------PKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 327 ~~~~~~~~~---------~~~~~------~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........+ ...++ ..... .....++..+.++|.+||+.||++|||+.++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 281 TLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000000000 00000 00000 000123456778999999999999999999986
No 161
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.3e-41 Score=315.81 Aligned_cols=260 Identities=25% Similarity=0.474 Sum_probs=205.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|.+.+.||+|+||.||+|.+..++. ....+|+|.+..... .....+.+|+.++..++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-- 79 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGK--REIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP-- 79 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCC--CceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc--
Confidence 578889999999999999998764432 123589998865432 234578899999999999999999999976653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +++||||||+|||++.++.++|+|||++
T Consensus 80 --~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd05066 80 --VMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLS 153 (267)
T ss_pred --cEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcc
Confidence 49999999999999999764 35689999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcce-eeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 256 RLGPSDGLSHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 256 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+.......... .....++..|+|||.+.+..++.++|||||||++|++++ |..||........ ...+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~---~~~~~~~~---- 226 (267)
T cd05066 154 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV---IKAIEEGY---- 226 (267)
T ss_pred cccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH---HHHHhCCC----
Confidence 86543321111 112234568999999998899999999999999999887 9999965443221 11111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
....+..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 227 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 ----------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011223466789999999999999999999999999875
No 162
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.8e-41 Score=330.18 Aligned_cols=241 Identities=26% Similarity=0.389 Sum_probs=189.7
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHH-HhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVN-VLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||.||+|.+..++.. ||+|++..... .....+..|.. +++.++||||+++++++...+ ..
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~----~~ 71 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKF-----YAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----KL 71 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC----eE
Confidence 3699999999999998776543 99999875432 12234444444 567789999999999988765 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 72 YFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 999999999999999976 45788899999999999999999998 9999999999999999999999999999754
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+..
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~----------- 210 (325)
T cd05602 147 IEHN--GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILN----------- 210 (325)
T ss_pred ccCC--CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HHHHHHh-----------
Confidence 3221 12345679999999999999999999999999999999999999997544322 1111110
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVV 377 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 377 (441)
.. ......++..+.+++.+||+.+|.+||++.+.+
T Consensus 211 --~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 211 --KP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred --CC--cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 00 011224567789999999999999999987543
No 163
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.2e-40 Score=313.76 Aligned_cols=253 Identities=28% Similarity=0.458 Sum_probs=202.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||+|.+..+. .+++|.+.... .....+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~------~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 73 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTT------KVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEE----- 73 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCc------eEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----
Confidence 56888899999999999999876543 28999876543 2345688999999999999999999987532
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.......+++..+..++.|++.||.|||+. +|+|+||||+||++++++.++|+|||+++
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 74 PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 248999999999999999765556689999999999999999999988 99999999999999999999999999997
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......++..|+|||...+..++.++||||||+++|+|++ |..||....... ...+.....
T Consensus 151 ~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~------ 220 (260)
T cd05069 151 LIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQVERGY------ 220 (260)
T ss_pred EccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC------
Confidence 65332211 1222346778999999988899999999999999999999 899997543322 111111100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
....+...+..+.+++.+||..+|++||++.+|+++|++
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 --------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011223456789999999999999999999999999875
No 164
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3e-41 Score=319.74 Aligned_cols=257 Identities=27% Similarity=0.404 Sum_probs=202.9
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
++..|++.+.||+|+||.||+|....++. .+|+|.+.... .....+.+|+.++.++ +||||+++++++.....
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQ-----LAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCc-----EEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 45678889999999999999999876654 38999886543 3345678899999998 79999999999876543
Q ss_pred C--CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 174 R--GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 174 ~--~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
. ....++||||+++++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 78 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 2 12468999999999999999865556789999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhh
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~ 326 (441)
||++....... .......|++.|+|||++. +..++.++|||||||++|||++|..||.............
T Consensus 155 fg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~--- 229 (272)
T cd06637 155 FGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--- 229 (272)
T ss_pred CCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh---
Confidence 99998643221 1234467899999999986 3457889999999999999999999996543221111100
Q ss_pred hhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. .. ........++..+.+++.+||..+|.+||++.++++
T Consensus 230 ~-----~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 R-----NP--------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred c-----CC--------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 00 001111234567899999999999999999999875
No 165
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.8e-41 Score=334.79 Aligned_cols=252 Identities=24% Similarity=0.387 Sum_probs=197.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|+..+.||+|+||.||++....++.. ||+|++..... .....+.+|+.++..++||||+++++.+.+.+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHI-----YAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR- 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCE-----EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 4688999999999999999998876654 99999875322 22456778999999999999999999988765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||++||+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 75 ---NLYLIMEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred ---EEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 45999999999999999976 36789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCC---------------------------------cceeeceecccCcCCccccccCCCCccccchhHHHHH
Q 013504 254 LARLGPSDGL---------------------------------SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFL 300 (441)
Q Consensus 254 la~~~~~~~~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il 300 (441)
+++....... .......+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 9875422110 0011235799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCchhHHHHH-HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC---HHHH
Q 013504 301 YELITGRRPLDRNRPKSEQKLL-EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK---MSEV 376 (441)
Q Consensus 301 ~elltG~~P~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev 376 (441)
|||++|+.||....+......+ .|.. . ..+.+ ...++..+.+++.+|+ .+|.+|++ +.++
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~-------~--~~~p~------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 290 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKE-------T--LVFPP------EVPISEKAKDLILRFC-TDSENRIGSNGVEEI 290 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCC-------c--eecCC------CCCCCHHHHHHHHHhc-cChhhcCCCCCHHHH
Confidence 9999999999765443222111 1100 0 00000 0124567888888876 49999985 5666
Q ss_pred HH
Q 013504 377 VE 378 (441)
Q Consensus 377 l~ 378 (441)
+.
T Consensus 291 ~~ 292 (360)
T cd05627 291 KS 292 (360)
T ss_pred hc
Confidence 65
No 166
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.7e-41 Score=320.61 Aligned_cols=252 Identities=29% Similarity=0.480 Sum_probs=201.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.|+..+.||+|+||.||++.+..++.. +|+|.+...... ....+.+|+.+++.++|+||+++++.+...+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-- 73 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKM-----YACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCce-----EEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--
Confidence 377788999999999999998877654 999988654322 2245678999999999999999999987765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 74 --~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 74 --ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred --EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 359999999999999998765455799999999999999999999987 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||...................
T Consensus 149 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~----- 220 (285)
T cd05630 149 AVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----- 220 (285)
T ss_pred eeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh-----
Confidence 87643321 1223578999999999999999999999999999999999999997543221111111110000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
....+..++..+.+++.+||+.||++||+ +.++++
T Consensus 221 ---------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 221 ---------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ---------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 01122235567899999999999999999 788887
No 167
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.4e-41 Score=330.89 Aligned_cols=240 Identities=27% Similarity=0.400 Sum_probs=189.2
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHH-HhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVN-VLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||+|+||+||+|.+..++.. +|+|++..... .....+..|.. +++.++||||+++++++...+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~----~~ 71 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKC-----YAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE----KL 71 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC----EE
Confidence 3699999999999998766543 99999875422 22344556655 467789999999999988765 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|..++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 72 YFVLDFVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 999999999999998865 46799999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+.. .
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~~~~---~------- 211 (325)
T cd05604 147 IAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE---MYDNILH---K------- 211 (325)
T ss_pred CCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH---HHHHHHc---C-------
Confidence 3221 12345679999999999999999999999999999999999999997543222 1111100 0
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV 376 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 376 (441)
.+ ......+..+.+++.+||+.+|.+||++.+.
T Consensus 212 ---~~--~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 212 ---PL--VLRPGASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred ---Cc--cCCCCCCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 00 0111345678899999999999999988643
No 168
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.7e-41 Score=315.61 Aligned_cols=253 Identities=26% Similarity=0.405 Sum_probs=202.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-----hhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-----GHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
++|...+.||+|+||.||+|....++. .+++|.+...... ....+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~-----~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGR-----ELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCc-----EEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence 578999999999999999998776554 4899987643221 234678899999999999999999999876
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+ ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++|+|
T Consensus 77 ~----~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 E----TLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred C----eEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 5 45999999999999999976 35788999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcc-eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 252 FGLARLGPSDGLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 252 FGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
||+++......... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||......... .. ..
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~-~~---- 220 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI--FK-IA---- 220 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH--HH-Hh----
Confidence 99987543321111 113356888999999999988999999999999999999999999654322111 11 00
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
........+..++..+.+++.+||..+|.+||++.+++..
T Consensus 221 ---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 221 ---------TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---------ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0001112333466788999999999999999999999863
No 169
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-40 Score=313.30 Aligned_cols=250 Identities=24% Similarity=0.476 Sum_probs=197.1
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEe
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E 183 (441)
||+|+||.||+|.+..... ...||+|.+...... ..+.+.+|+.++++++||||+++++++... ..++|||
T Consensus 3 ig~G~~g~v~~~~~~~~~~---~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~-----~~~lv~e 74 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKK---QIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE-----ALMLVME 74 (257)
T ss_pred cCCCCcccEEEEEEecCCC---ceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC-----CeEEEEE
Confidence 8999999999998764322 234899998765432 235688999999999999999999988533 2489999
Q ss_pred ccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCC
Q 013504 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL 263 (441)
Q Consensus 184 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 263 (441)
|+++++|.+++..+ ...+++..++.++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.......
T Consensus 75 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 75 MASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150 (257)
T ss_pred eCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence 99999999998753 35789999999999999999999998 999999999999999999999999999986443321
Q ss_pred cce-eeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 264 SHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 264 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
... .....++..|+|||++.+..++.++|||||||++|++++ |..||...........+. ..
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~------------- 214 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE---QG------------- 214 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH---CC-------------
Confidence 111 112234678999999988889999999999999999996 999997654332221111 10
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
.....+..++.++.+++.+||..+|++||++.+|++.|+.+
T Consensus 215 -~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 215 -KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 01112234567899999999999999999999999998764
No 170
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.1e-41 Score=330.62 Aligned_cols=242 Identities=26% Similarity=0.376 Sum_probs=192.5
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~l 180 (441)
+.||+|+||.||++...... ..+..+|+|++...... ....+.+|+.+|++++||||+++++++...+ ..|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGP--DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG----KLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC----EEEE
Confidence 57999999999998764221 12335999998764322 2345678999999999999999999998765 4599
Q ss_pred EEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 181 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 76 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 150 (318)
T cd05582 76 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 150 (318)
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCC
Confidence 9999999999999965 35789999999999999999999998 999999999999999999999999999986433
Q ss_pred CCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcC
Q 013504 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD 340 (441)
Q Consensus 261 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (441)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 151 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---~~~i~~~------------ 213 (318)
T cd05582 151 HE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---MTMILKA------------ 213 (318)
T ss_pred CC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH---HHHHHcC------------
Confidence 21 123346799999999999988899999999999999999999999975433221 1111100
Q ss_pred CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHH
Q 013504 341 PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSE 375 (441)
Q Consensus 341 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 375 (441)
....+..++..+.+++.+||+.||++||++.+
T Consensus 214 ---~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 214 ---KLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred ---CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00122235677889999999999999999554
No 171
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.8e-41 Score=313.94 Aligned_cols=251 Identities=26% Similarity=0.382 Sum_probs=203.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+|++.+.||.|+||.||++.+..++. .+++|.+.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 71 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQ-----KYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG---- 71 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCc-----eEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC----
Confidence 57888999999999999999876654 38999876432 233467788999999999999999999987665
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.......+++..++.++.|++.||.|||++ +|+|+||||+||++++++.++|+|||+++
T Consensus 72 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 72 HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 459999999999999998765566789999999999999999999998 99999999999999999999999999997
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...... .......|++.|+|||++.+..++.++|+||||+++|+|++|..||........... .... .
T Consensus 149 ~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~---~~~~-----~-- 216 (255)
T cd08219 149 LLTSPG--AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILK---VCQG-----S-- 216 (255)
T ss_pred eecccc--cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHH---HhcC-----C--
Confidence 654322 123346789999999999988899999999999999999999999975432211111 1000 0
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
....+..++..+.+++.+||+.||++||++.+++..
T Consensus 217 -------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 -------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 011223455678899999999999999999999864
No 172
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1e-40 Score=322.44 Aligned_cols=266 Identities=26% Similarity=0.367 Sum_probs=202.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||++.+..++. .+++|.+...... ...++.+|+.++.+++||||+++++++...+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGL-----IMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG--- 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCe-----EEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC---
Confidence 368999999999999999999877654 3888887654322 2356889999999999999999999998766
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. .+++||||||+|||++.++.++|+|||++
T Consensus 73 -~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 73 -EISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred -EEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 45999999999999999976 36789999999999999999999973 28999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc-
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK- 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~- 334 (441)
...... ......|++.|+|||++.+..++.++|||||||++|+|++|..||........................
T Consensus 148 ~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (308)
T cd06615 148 GQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESH 223 (308)
T ss_pred cccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCc
Confidence 754332 123467899999999998888999999999999999999999999654322222111110000000000
Q ss_pred -------------------hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 335 -------------------FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 335 -------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
................++..+.+++.+||..+|++||++.+|+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 224 RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000011256679999999999999999999999884
No 173
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.1e-41 Score=331.02 Aligned_cols=274 Identities=24% Similarity=0.298 Sum_probs=202.8
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|.+.+.||+|+||.||++.+..++. .||||.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDR-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCc-----eEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecc
Confidence 345789999999999999999998766554 399999875432 2345677899999999999999999998754
Q ss_pred cc--CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 172 DE--RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 172 ~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
.. .....|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||
T Consensus 89 ~~~~~~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl 160 (355)
T cd07874 89 KSLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 160 (355)
T ss_pred ccccccceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEE
Confidence 32 11246899999964 67777643 588899999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhh---
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWV--- 325 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~--- 325 (441)
+|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.......... .+...
T Consensus 161 ~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (355)
T cd07874 161 LDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237 (355)
T ss_pred eeCcccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999999864332 12344678999999999999999999999999999999999999997544222111 11100
Q ss_pred ------------hhhcccccchhhhcCCCC--------CCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHH
Q 013504 326 ------------RPHLTDAKKFTMILDPKL--------EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKI 383 (441)
Q Consensus 326 ------------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 383 (441)
...............+.. ........+..+.+++.+||..||++|||+.++++ ++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred CHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 000000000000000000 00111223467889999999999999999999998 35443
No 174
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.3e-40 Score=319.81 Aligned_cols=268 Identities=25% Similarity=0.425 Sum_probs=202.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCC-----------cccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeE
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTED-----------SHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKL 164 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l 164 (441)
++|++.+.||+|+||.||++.+..... ......+|+|.+..... .....+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 569999999999999999987543211 11234589999875432 234678899999999999999999
Q ss_pred EeEEeccccCCeeEEEEEeccCCCChHHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccC
Q 013504 165 IGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQ---------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235 (441)
Q Consensus 165 ~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlK 235 (441)
++++...+. .++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|||||
T Consensus 85 ~~~~~~~~~----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlk 157 (296)
T cd05095 85 LAVCITSDP----LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLA 157 (296)
T ss_pred EEEEecCCc----cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCC
Confidence 999987664 4999999999999999875321 2467889999999999999999998 99999999
Q ss_pred CCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh--CCCCCCCC
Q 013504 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT--GRRPLDRN 313 (441)
Q Consensus 236 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--G~~P~~~~ 313 (441)
|+|||++.++.++|+|||+++...............+++.|++||...++.++.++|||||||++|||++ |..||...
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999999986543322122223345678999999888899999999999999999998 77888654
Q ss_pred CchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 314 RPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
....... ........... .. ....+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 238 ~~~~~~~---~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 238 SDEQVIE---NTGEFFRDQGR--QV-----YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ChHHHHH---HHHHHHhhccc--cc-----cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 3322111 11000000000 00 00111235578899999999999999999999999886
No 175
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.6e-41 Score=317.71 Aligned_cols=255 Identities=24% Similarity=0.334 Sum_probs=201.3
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|++.+.||+|+||.||+|....++. .+|+|++..........+.+|+.++..++||||+++++++...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--- 79 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGE-----LAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--- 79 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCe-----EEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC---
Confidence 3579999999999999999999876654 49999987654444566788999999999999999999997665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 80 -~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 80 -KLWICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred -EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 45999999999999999865 35789999999999999999999988 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
+...... .......|++.|+|||.+. ...++.++|||||||++|||++|+.||....+..... ....
T Consensus 154 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~~~~------ 223 (267)
T cd06646 154 AKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LMSK------ 223 (267)
T ss_pred eeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--eeec------
Confidence 8653221 1123457899999999874 3457889999999999999999999986433221110 0000
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. ...+.. .....++..+.+++.+||..+|++||+++++++.
T Consensus 224 ~~---~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 224 SN---FQPPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CC---CCCCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00 000111 1112356789999999999999999999999874
No 176
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-40 Score=336.15 Aligned_cols=264 Identities=20% Similarity=0.268 Sum_probs=196.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
...|.+.+.||+|+||.||+|.+..++. .||||.... ..+.+|+.+|++++|||||++++++.....
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~-----~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~-- 234 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQ-----RVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGL-- 234 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCC-----EEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCE--
Confidence 4579999999999999999999877654 389986422 345689999999999999999999877653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++|||++ .++|.+++..+ ...+++..++.|+.||+.||.|||++ +|+||||||+||||+.++.+||+|||++
T Consensus 235 --~~lv~e~~-~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 235 --TCLVLPKY-RSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred --EEEEEEcc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 48999999 57999988654 34799999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCch--------hHHHHHHhhhh
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPK--------SEQKLLEWVRP 327 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~--------~~~~~~~~~~~ 327 (441)
+...............||+.|+|||++.+..++.++|||||||++|||++|..|+...... .....+.....
T Consensus 308 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~ 387 (461)
T PHA03211 308 CFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQV 387 (461)
T ss_pred eecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcc
Confidence 8654332222233467999999999999999999999999999999999988765322111 11112221111
Q ss_pred hcccccc-----hh--------hhcCCCCCCcch---HHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 328 HLTDAKK-----FT--------MILDPKLEGKYS---IKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 328 ~~~~~~~-----~~--------~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
....... .. ....+....... ......+.+||.+||+.||++|||+.|+|+.
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 388 HVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 00 000000000000 0234578899999999999999999999973
No 177
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=325.23 Aligned_cols=252 Identities=25% Similarity=0.394 Sum_probs=213.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh--HHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH--KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
=|...+.||+|.|.+|-+|++.-++.. ||||++.+...... ..+.+|++.|+.++|||||+||.+.....
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGek-----VAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT--- 90 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEK-----VAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT--- 90 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccce-----eEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc---
Confidence 466667899999999999998888765 99999998766543 56889999999999999999999987655
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE-cCCCcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl-~~~~~~kl~DFGl 254 (441)
.+|||+|+-++|+|++||-+. ...+.+..+.+++.||+.|+.|+|+- ++|||||||+||.+ ..-|-|||+|||+
T Consensus 91 -KlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGF 165 (864)
T KOG4717|consen 91 -KLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGF 165 (864)
T ss_pred -eEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccc
Confidence 459999999999999999765 46899999999999999999999987 99999999999887 5668899999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCc-cccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY-KSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+..+.+.. ..++.+|...|-|||++.+..|+. ++||||||||||.|++|++||+..+.. +
T Consensus 166 SNkf~PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----------------E 226 (864)
T KOG4717|consen 166 SNKFQPGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----------------E 226 (864)
T ss_pred cccCCCcc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----------------h
Confidence 98665532 456789999999999999999974 689999999999999999999755432 2
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKI 383 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 383 (441)
.+.+++|-+. ..+..++.+..+||..||..||.+|.+.++|+. +|+.+
T Consensus 227 TLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~ 276 (864)
T KOG4717|consen 227 TLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG 276 (864)
T ss_pred hhhhhhcccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence 3344454432 356778899999999999999999999999987 45543
No 178
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.1e-41 Score=315.54 Aligned_cols=260 Identities=25% Similarity=0.419 Sum_probs=206.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|....++. .++||.+..... .....+.+|+.+++.++||||+++++++...+.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGV-----PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCc-----eEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence 468888899999999999999876654 389998765332 234578899999999999999999999987653
Q ss_pred CCeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
.++||||+++++|.+++.. .....+++..++.++.||+.||.|||++ +++|+||||+||+++.++.++|+|
T Consensus 77 ----~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~d 149 (267)
T cd08229 77 ----LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ----EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECc
Confidence 4899999999999999863 2235689999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
||++....... .......|+..|+|||++.+..++.++||||||+++|+|++|..||...... ..........
T Consensus 150 fg~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~---- 222 (267)
T cd08229 150 LGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQ---- 222 (267)
T ss_pred chhhhccccCC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhhhhhc----
Confidence 99987654322 1123457899999999998888999999999999999999999999643321 1111111100
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
...+ ......++..+.+++.+||..+|++||++.+|++.+.++.
T Consensus 223 ------~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 223 ------CDYP---PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ------CCCC---CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0001 1112246678999999999999999999999999998763
No 179
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-40 Score=319.05 Aligned_cols=262 Identities=27% Similarity=0.456 Sum_probs=203.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++|++.+.||+|+||.||+|.+...........+|+|.+..... .....+.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~- 82 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP- 82 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc-
Confidence 467999999999999999999875421112234699999875433 234668899999999999999999999887654
Q ss_pred CeeEEEEEeccCCCChHHHHhhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRF--------------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 234 (441)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||.+ +++||||
T Consensus 83 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl 156 (288)
T cd05050 83 ---MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDL 156 (288)
T ss_pred ---cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceecccc
Confidence 499999999999999996421 12478888999999999999999998 9999999
Q ss_pred CCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCC
Q 013504 235 KSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRN 313 (441)
Q Consensus 235 Kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~ 313 (441)
||+|||++.++.++|+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 157 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 157 ATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred cHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999875433221112223345678999999988899999999999999999998 88898654
Q ss_pred CchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 314 RPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.... ....+.. .. . ...+..++..+.+++.+||+.+|.+||++.++++.|+
T Consensus 237 ~~~~---~~~~~~~----~~---------~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 237 AHEE---VIYYVRD----GN---------V-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CHHH---HHHHHhc----CC---------C-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 3322 1111110 00 0 0112235678999999999999999999999999886
No 180
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.2e-41 Score=317.76 Aligned_cols=261 Identities=25% Similarity=0.422 Sum_probs=207.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|+..+.||+|+||.||+|.............+++|.+...... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP-- 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc--
Confidence 578899999999999999999877655555667999988765443 34678899999999999999999999877654
Q ss_pred eeEEEEEeccCCCChHHHHhhcCC-------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEE
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQ-------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~k 248 (441)
.++||||+++|+|.+++..... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++
T Consensus 83 --~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 83 --HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred --ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEE
Confidence 4999999999999999975431 1689999999999999999999988 999999999999999999999
Q ss_pred EeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhh
Q 013504 249 LSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 249 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 327 (441)
|+|||+++...... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||....... .......
T Consensus 158 l~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~~~~~~ 233 (275)
T cd05046 158 VSLLSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VLNRLQA 233 (275)
T ss_pred EcccccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HHHHHHc
Confidence 99999987543221 112233466788999999988889999999999999999999 788986433221 2211110
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.......+..++..+.+++.+||+.+|++||++.+++..|.
T Consensus 234 -------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 -------------GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -------------CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00001112235578999999999999999999999999875
No 181
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.2e-40 Score=315.34 Aligned_cols=262 Identities=28% Similarity=0.453 Sum_probs=208.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|++.+.||+|+||.||+|.+..++.. ....+++|.+...... ....+.+|+.++..++||||+++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~-~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--- 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEK-VKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S--- 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCC-cceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C---
Confidence 5688889999999999999998765532 2445899988765432 34678899999999999999999999976 2
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 82 -~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~ 156 (279)
T cd05057 82 -QVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLA 156 (279)
T ss_pred -ceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccc
Confidence 358999999999999999764 34689999999999999999999997 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+...............++..|+|||.+....++.++||||||+++||+++ |..||.......... .+... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~---~~~~~----~- 228 (279)
T cd05057 157 KLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD---LLEKG----E- 228 (279)
T ss_pred ccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH---HHhCC----C-
Confidence 87653322211222234678999999988889999999999999999998 999997654332221 11110 0
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
....+..++..+.+++.+||..+|.+||++.++++.|..+.+
T Consensus 229 ---------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 229 ---------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 001111244568899999999999999999999999999865
No 182
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8e-41 Score=352.64 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=204.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.++||+|+||.||+|.+..++. .||+|++..... ...+++.+|+.+++.++||||+++++++.+.+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~-----~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~- 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSR-----RVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD- 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCc-----EEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-
Confidence 579999999999999999999877654 399999875322 22457889999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcC---------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRF---------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
..++||||++||+|.+++.... ...+++..++.++.||+.||.|||++ +|+||||||+|||++.+
T Consensus 76 ---~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~d 149 (932)
T PRK13184 76 ---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLF 149 (932)
T ss_pred ---EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCC
Confidence 3599999999999999986421 23456678899999999999999998 99999999999999999
Q ss_pred CcEEEeecCCCCCCCCCCC----------------cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCC
Q 013504 245 WNAKLSDFGLARLGPSDGL----------------SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRR 308 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~ 308 (441)
+.++|+|||+++....... .......+||+.|+|||++.+..++.++|||||||++|||+||..
T Consensus 150 g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~ 229 (932)
T PRK13184 150 GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSF 229 (932)
T ss_pred CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCC
Confidence 9999999999986521110 001123579999999999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-CHHHHHHHHHHHHhhh
Q 013504 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-KMSEVVEVLNKIVDAA 387 (441)
Q Consensus 309 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 387 (441)
||........ ... .... ++. .......+++.+.+++.+||+.||++|| +++++++.|+..+...
T Consensus 230 PF~~~~~~ki---~~~--~~i~---------~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 230 PYRRKKGRKI---SYR--DVIL---------SPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred CCCCcchhhh---hhh--hhcc---------Chh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 9965322111 000 0000 000 0001124567788999999999999995 6777888888877643
No 183
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-40 Score=312.89 Aligned_cols=253 Identities=27% Similarity=0.425 Sum_probs=202.6
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
+.||+|+||.||+|.+.... .....||+|.+..... ...+.+.+|+.++++++||||+++++++.. . ..++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~----~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSG--GKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H----PLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCC--CCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C----eEEEE
Confidence 36899999999999986532 2233589999987766 456788899999999999999999999876 3 45999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+++.....
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccc
Confidence 9999999999999765335789999999999999999999998 9999999999999999999999999999876442
Q ss_pred CCc-ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 262 GLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 262 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
... .......++..|+|||++.+..++.++|||||||++|+|++ |..||............. .. ..
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~---~~---~~------ 218 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKID---KE---GE------ 218 (257)
T ss_pred ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---hc---CC------
Confidence 211 11223467889999999998899999999999999999999 999996544332211111 00 00
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
....+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 219 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 ----RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ----cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00112235678999999999999999999999999875
No 184
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-40 Score=329.54 Aligned_cols=273 Identities=24% Similarity=0.292 Sum_probs=202.3
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
..++|.+.+.||+|+||.||+|.+..++. .||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~ 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILER-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCc-----EEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence 35789999999999999999999876654 39999987542 223456789999999999999999999886543
Q ss_pred c--CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 173 E--RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 173 ~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
. .....|+||||++ ++|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~ 168 (364)
T cd07875 97 SLEEFQDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 168 (364)
T ss_pred cccccCeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEE
Confidence 2 1224699999996 477777743 578899999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhhh--
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRP-- 327 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~~-- 327 (441)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........... +.....
T Consensus 169 DfG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 169 DFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred eCCCccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99999865332 123346789999999999999999999999999999999999999976543222111 110000
Q ss_pred -------------hcccccc-----hhhhcCCCC---CCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHH
Q 013504 328 -------------HLTDAKK-----FTMILDPKL---EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKI 383 (441)
Q Consensus 328 -------------~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 383 (441)
...+... +........ ...........+.+++.+||+.||.+|||+.++++ +++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 0000000 000000000 00111123457889999999999999999999998 45443
No 185
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.7e-40 Score=312.18 Aligned_cols=252 Identities=29% Similarity=0.518 Sum_probs=199.7
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
+.||+|+||.||+|.+..... ....+|+|.+...... ..+.+.+|+.+++.+.||||+++++++... ..++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSG--KEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE-----PLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCC--CcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC-----ceEEE
Confidence 369999999999998765542 2235999998866543 346788999999999999999999987643 24899
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++|+|.+++... ..+++..++.++.|++.||.|||.. +++|+||||+|||++.++.+||+|||+++.....
T Consensus 74 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 74 MELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred EEeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 9999999999999763 4789999999999999999999988 9999999999999999999999999999865433
Q ss_pred CCcc-eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhc
Q 013504 262 GLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMIL 339 (441)
Q Consensus 262 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (441)
.... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ...++....
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~~~~~---------- 215 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAMLESGE---------- 215 (257)
T ss_pred CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHHcCC----------
Confidence 2111 1112234568999999998899999999999999999998 999997554322 222221110
Q ss_pred CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 340 DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 340 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
....+..++..+.+++.+||..+|++||++.++++.|+++
T Consensus 216 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 216 ----RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ----cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 0011223456889999999999999999999999999875
No 186
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.1e-40 Score=318.58 Aligned_cols=251 Identities=28% Similarity=0.451 Sum_probs=199.5
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
|+..+.||+|+||+||+|.+..++. .+|+|.+...... ....+.+|+.+|+.++|+||+++++++...+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--- 73 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGK-----MYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD--- 73 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCc-----EEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC---
Confidence 6777899999999999999877654 3999988654322 2245678999999999999999999887765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 74 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 74 -ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred -EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 359999999999999998765455799999999999999999999988 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... ......|+..|+|||++.+..++.++|||||||++|+|++|..||...........+... ....
T Consensus 150 ~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~---~~~~--- 220 (285)
T cd05632 150 VKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR---VLET--- 220 (285)
T ss_pred eecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh---hhcc---
Confidence 7543221 123457899999999999889999999999999999999999999754332211111110 0000
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
...+...++..+.+|+..||+.||++||+ +.+++.
T Consensus 221 --------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 221 --------EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred --------ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01122345667889999999999999999 556665
No 187
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-40 Score=319.84 Aligned_cols=250 Identities=26% Similarity=0.423 Sum_probs=204.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|.+.+.||+|+||.||+|....++. .+++|.+..........+.+|+.+++.++||||+++++++....
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~---- 90 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQ-----EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD---- 90 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCc-----EEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC----
Confidence 689999999999999999999766554 39999988766555677889999999999999999999987654
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.. ..+++.++..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++.
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 91 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred EEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 45999999999999999864 4688999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...... .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||....+... .......
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~--~~~~~~~--------- 231 (296)
T cd06654 165 QITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA--LYLIATN--------- 231 (296)
T ss_pred hccccc--cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh--HHHHhcC---------
Confidence 643321 112345789999999999888899999999999999999999999965443211 1111100
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.......+..++..+.+++.+||..+|++||++.+++.
T Consensus 232 ----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 232 ----GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ----CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 00001122345677899999999999999999999998
No 188
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.4e-40 Score=314.02 Aligned_cols=245 Identities=24% Similarity=0.419 Sum_probs=191.5
Q ss_pred eeecccceeEEEEEEcCCCC-------cccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 104 MIGEGGFGGVYRGVIRSTED-------SHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.||+|+||.||+|+...... ......+++|.+..........+.+|+.++..++||||+++++++......
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~-- 79 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN-- 79 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC--
Confidence 58999999999998654321 233456899988765544456788899999999999999999999876543
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc-------EEE
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN-------AKL 249 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~-------~kl 249 (441)
++||||+++|+|..++..+ ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++. +++
T Consensus 80 --~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 --IMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred --EEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 8999999999999888653 35689999999999999999999998 9999999999999987664 899
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccc-cCCCCccccchhHHHHHHHHH-hCCCCCCCCCchhHHHHHHhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELI-TGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~ell-tG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
+|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||............. .
T Consensus 154 ~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~---~ 224 (262)
T cd05077 154 SDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYE---G 224 (262)
T ss_pred CCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHh---c
Confidence 999998754321 2356788999999886 466899999999999999998 5888886443222111100 0
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. .. .....+..+.+|+.+||+.||++||++.+|++.|+
T Consensus 225 ------~--------~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 225 ------Q--------CM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred ------C--------cc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 0 00 00112457889999999999999999999998763
No 189
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.1e-41 Score=326.42 Aligned_cols=238 Identities=25% Similarity=0.371 Sum_probs=187.8
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHH-HhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVN-VLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
++||+|+||.||+|.+..++.. ||+|++..... .....+..|.. +++.++||||+++++++...+ ..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~----~~ 71 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSF-----YAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE----KL 71 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCE-----EEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC----EE
Confidence 3699999999999998776543 99999875432 12334555554 578899999999999987665 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|..++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 72 YFVLDYVNGGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred EEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 999999999999998865 46788999999999999999999998 9999999999999999999999999998753
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.... .......||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+..
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~----------- 210 (321)
T cd05603 147 VEPE--ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ---MYDNILH----------- 210 (321)
T ss_pred CCCC--CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH---HHHHHhc-----------
Confidence 2221 12344679999999999998899999999999999999999999997543221 1111100
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 374 (441)
.. ...+...+..+.+++.+||+.+|.+||++.
T Consensus 211 --~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 211 --KP--LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred --CC--CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 00 011223456788999999999999999864
No 190
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-40 Score=311.61 Aligned_cols=253 Identities=33% Similarity=0.558 Sum_probs=204.3
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
+.||+|+||.||+|...... .....+++|.+....... ...+.+|+.++..++|+||+++++++.... ..++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~----~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKD--GKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE----PLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCC--CCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCC----ceEEE
Confidence 36999999999999987541 123359999988765443 567889999999999999999999998744 35999
Q ss_pred EeccCCCChHHHHhhcC-------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 182 YEYMPNRSVQDHLTSRF-------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
|||+++++|.+++.... ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.++|+|||.
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~ 151 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGL 151 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccc
Confidence 99999999999997642 36799999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+................++..|+|||.+....++.++||||||+++|+|++ |..||....... ....... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~----~- 223 (262)
T cd00192 152 SRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYLRK----G- 223 (262)
T ss_pred ccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHc----C-
Confidence 987655432223345678899999999988889999999999999999999 699997653222 2221111 0
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 224 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 ---------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011122345678999999999999999999999998873
No 191
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.6e-41 Score=323.85 Aligned_cols=266 Identities=23% Similarity=0.388 Sum_probs=200.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|.+.+.||+|+||.||+|....++.. ||+|.+...... ....+.+|+.++++++||||+++++++...+.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 78 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENL-----VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKS-- 78 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCe-----EEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCe--
Confidence 5789999999999999999998766553 999988754322 23457789999999999999999999987653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++ +|.+++... +..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 79 --~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 79 --LTLVFEYLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred --EEEEEeCCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 5999999964 888888653 35688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh------
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH------ 328 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~------ 328 (441)
+...... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+......
T Consensus 152 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
T cd07872 152 RAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229 (309)
T ss_pred eecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 7543221 12234578999999998865 46889999999999999999999999765543332222111100
Q ss_pred --cccccchhhhcCCCCCC----cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 --LTDAKKFTMILDPKLEG----KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 --~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.....+.....+.... .....++.++.+++.+||..||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 230 PGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000000000000 011235667899999999999999999999998
No 192
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.5e-40 Score=312.20 Aligned_cols=260 Identities=23% Similarity=0.406 Sum_probs=207.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|....++. .+++|.+..... .....+.+|+.++++++|+||+++++++...+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~- 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGR-----VVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN- 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCC-----EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-
Confidence 578999999999999999999875554 389998764322 23467889999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
..++||||+++++|.+++... ....+++..++.++.+++.||.|||+. +|+||||||+||+++.++.++|+|
T Consensus 76 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d 149 (267)
T cd08224 76 ---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred ---eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEec
Confidence 349999999999999998642 235689999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
||+++....... ......|++.|+|||.+.+..++.++|||||||++|+|++|..||...... ..........
T Consensus 150 ~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~---- 222 (267)
T cd08224 150 LGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEK---- 222 (267)
T ss_pred cceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHHhhhhc----
Confidence 999876543221 123357899999999998888999999999999999999999999543311 1111111100
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
..........++..+.+++.+||..+|++||++.+|++.|+++.
T Consensus 223 ---------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 ---------CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---------CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00011111255678999999999999999999999999998763
No 193
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.2e-40 Score=317.34 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=196.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.++||+|+||.||+|.+..++. .+|+|.+.... ......+.+|+.++.+++||||+++++++...+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRR-----ILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENR-- 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCc-----EEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCE--
Confidence 368888999999999999999876654 39999886542 2234578899999999999999999999987653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|..+ ..+++..+..++.|++.||.|||+. +|+|+||||+|||++.++.++|+|||++
T Consensus 74 --~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 74 --ISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred --EEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 4899999999999654 2467888999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (441)
...... ......||..|+|||++.+..++.++|||||||++|+|++|+.||........... .....
T Consensus 143 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-------- 210 (279)
T cd06619 143 TQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQ-------- 210 (279)
T ss_pred eecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHH--------
Confidence 764332 23346789999999999998999999999999999999999999964322111000 00000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
...+...........+..+.+++.+||+.+|++||+++++++.
T Consensus 211 --~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 211 --CIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred --HHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000001112345678999999999999999999999873
No 194
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.4e-41 Score=333.56 Aligned_cols=269 Identities=23% Similarity=0.304 Sum_probs=200.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|+||.||+|.+..++. .||+|.+.... ....+.+.+|+.+++.++||||+++++++...+...
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGK-----RVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP 75 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCC-----EEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc
Confidence 58889999999999999999866554 49999986532 233467889999999999999999999987655211
Q ss_pred -eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 176 -IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 176 -~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
...|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~lv~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~ 149 (372)
T cd07853 76 FEEIYVVTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGL 149 (372)
T ss_pred cceEEEEeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccc
Confidence 24699999995 688888865 46799999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc-
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA- 332 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~- 332 (441)
++...... ........+|+.|+|||++.+. .++.++|||||||++|||++|+.||....+......+..........
T Consensus 150 a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 150 ARVEEPDE-SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred eeecccCc-cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 98643322 1122345689999999998774 47899999999999999999999997665433222211110000000
Q ss_pred -----cchh-hhcC-CCCCC------cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 -----KKFT-MILD-PKLEG------KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 -----~~~~-~~~~-~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.... .+.. +.... ......++.+.+++.+||+.||++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000 0000 00000 111223567889999999999999999999987
No 195
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.2e-40 Score=310.95 Aligned_cols=257 Identities=28% Similarity=0.481 Sum_probs=196.5
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
+.||+|+||.||+|.+..... ....+|+|.+.... ......+.+|+.+++.++||||+++++++...+. ..++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv 75 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDG--QKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG---SPLVV 75 (262)
T ss_pred CcccccCCceEEEEEEecCCC--ceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC---CcEEE
Confidence 368999999999998754321 23459999886432 2345678899999999999999999998765432 24899
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+.+|+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 76 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 76 LPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred EecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCC
Confidence 9999999999999754 34567788899999999999999988 9999999999999999999999999999754332
Q ss_pred CCc--ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhC-CCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 262 GLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITG-RRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 262 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
... .......++..|+|||.+.+..++.++|||||||++|||++| .+||....... ....... ..
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~~~~~~----~~----- 219 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---ITVYLLQ----GR----- 219 (262)
T ss_pred cceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhc----CC-----
Confidence 111 111234567789999999888999999999999999999995 56665433221 1111110 00
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
....+..++..+.+++.+||..+|++||++.+|+..|+++..
T Consensus 220 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 220 -----RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -----CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 001112345678999999999999999999999999998764
No 196
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.6e-40 Score=313.22 Aligned_cols=261 Identities=27% Similarity=0.455 Sum_probs=206.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|.+.+.||+|+||.||+|.+.... .....|+||...... ....+.+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--- 80 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPE--NEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENP--- 80 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCC--CCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCC---
Confidence 56888899999999999999876542 122348999887654 234567889999999999999999999886532
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +++||||||+|||++.++.++|+|||++
T Consensus 81 --~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 81 --VWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred --cEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCcee
Confidence 38999999999999999753 34689999999999999999999988 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... .......++..|+|||.+....++.++||||||+++|||++ |..||........... ... ...
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~---~~~----~~~ 226 (270)
T cd05056 155 RYLEDESY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR---IEN----GER 226 (270)
T ss_pred eecccccc-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH---HHc----CCc
Confidence 86543321 11222344568999999988889999999999999999986 9999975543222111 110 000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
...+..++..+.+++.+|+..+|.+||++.+++..|+++.+.
T Consensus 227 ----------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 227 ----------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011224567899999999999999999999999999998654
No 197
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-40 Score=323.93 Aligned_cols=267 Identities=26% Similarity=0.442 Sum_probs=208.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCC--cccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTED--SHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
.+|.+.+.||+|+||.||+|.+..... ......+|+|.+..... .....+.+|+.+++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468999999999999999998754332 22334689998875432 2346788999999999 8999999999998765
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCc
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSN 238 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~N 238 (441)
. .++||||+++|+|.+++..+. ...+++..++.++.|++.||.|||++ +|+||||||+|
T Consensus 92 ~----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 164 (334)
T cd05100 92 P----LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARN 164 (334)
T ss_pred c----eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence 3 499999999999999997532 23478889999999999999999998 99999999999
Q ss_pred EEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchh
Q 013504 239 ILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKS 317 (441)
Q Consensus 239 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~ 317 (441)
||++.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999999986543221111222344568999999999999999999999999999998 889986543322
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
.... +... .....+..++..+.+++.+||..+|++||++.++++.|+++....
T Consensus 245 ~~~~---~~~~--------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 245 LFKL---LKEG--------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHH---HHcC--------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 2111 1100 001112234567889999999999999999999999999987543
No 198
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-42 Score=337.03 Aligned_cols=244 Identities=26% Similarity=0.441 Sum_probs=204.5
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEe
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E 183 (441)
+||+|+||+||.|++..+.. .+|||.+........+-+..|+.+.++|+|.|||+++|.+.+.+ .+-|.||
T Consensus 582 VLGKGTYG~VYA~RD~~tqv-----rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFME 652 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQV-----RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFME 652 (1226)
T ss_pred EeecCceeEEEeecccccee-----EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEee
Confidence 69999999999999887764 49999998877766677889999999999999999999987665 3467899
Q ss_pred ccCCCChHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc-CCCcEEEeecCCCCCCCC
Q 013504 184 YMPNRSVQDHLTSRFQATL--PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD-EQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 184 ~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla~~~~~ 260 (441)
-++||+|.+.|..+. +++ ++.++..+.+||++||.|||.+ .|||||||-+|||++ -.|.+||+|||.++.+..
T Consensus 653 qVPGGSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred cCCCCcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 999999999998765 456 7888999999999999999998 999999999999995 578899999999987543
Q ss_pred CCCcceeeceecccCcCCccccccC--CCCccccchhHHHHHHHHHhCCCCCCCCCc-hhHHHHHHhhhhhcccccchhh
Q 013504 261 DGLSHVSTAVVGTIGYAAPEYIQTG--RLTYKSDIWSFGVFLYELITGRRPLDRNRP-KSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 261 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
......++.||..|||||++..+ .|+.++|||||||++.||.||++||-.... ...+-.+. .
T Consensus 729 --inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG----------m--- 793 (1226)
T KOG4279|consen 729 --INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG----------M--- 793 (1226)
T ss_pred --CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc----------c---
Confidence 34456789999999999999875 488999999999999999999999953321 11111111 0
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
-+.....+.+.+.+...+|.+|+.+||.+||+++++++
T Consensus 794 ---yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 794 ---YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ---eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 11234567788999999999999999999999999987
No 199
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.7e-40 Score=312.54 Aligned_cols=255 Identities=30% Similarity=0.495 Sum_probs=204.9
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|.+.+.||+|+||.||+|.+.... .++||.+..... ....+.+|+.++++++||||+++++++.....
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~------~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-- 75 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTT------KVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEP-- 75 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCc------eEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCc--
Confidence 467999999999999999999875432 389998875443 34678899999999999999999999876553
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++++|.+++....+..+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++
T Consensus 76 --~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 76 --IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred --eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 49999999999999999876556799999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... .......++..|+|||.+.+..++.++||||||+++++|++ |+.||....... .........
T Consensus 151 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~~~~~~----- 221 (261)
T cd05034 151 RLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLEQVERGY----- 221 (261)
T ss_pred eeccchhh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-----
Confidence 86543211 11122335678999999998889999999999999999999 999996543221 222111100
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
....+...+..+.+++.+||..+|++||++.++++.|+.
T Consensus 222 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 ---------RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001112335678999999999999999999999999875
No 200
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.9e-41 Score=331.16 Aligned_cols=266 Identities=22% Similarity=0.308 Sum_probs=207.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-C-----CCeeeEEeEEecc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-H-----PNLVKLIGYCAED 171 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h-----pnIv~l~~~~~~~ 171 (441)
+|.+.++||+|+||.|.+|.+..+++. ||||+++... ....+...|+.+|..|+ | -|+|+++++|...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~-----VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEI-----VAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcE-----EEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 688899999999999999999988875 9999997653 33466678999999996 4 3999999999988
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC--CcEEE
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ--WNAKL 249 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~--~~~kl 249 (441)
++ +|||+|.+ ..+|+++|+.+.-..++...+..|+.||+.||.+||+. +|||+||||+||||.+. ..|||
T Consensus 261 ~H----lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 261 NH----LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cc----eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 75 49999999 67999999987778899999999999999999999987 99999999999999643 46999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh-
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH- 328 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~- 328 (441)
+|||.|...... ..+++-+..|.|||++.+.+|+.+.||||||||++||++|.+-|.+.+..+....+..+...
T Consensus 333 IDFGSSc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~P 407 (586)
T KOG0667|consen 333 IDFGSSCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLP 407 (586)
T ss_pred EecccccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCC
Confidence 999999875432 22678899999999999999999999999999999999998888776654443222111100
Q ss_pred --------------ccc---------ccc-----------------hhhhcCC----CCCCcchHHHHHHHHHHHHHhhc
Q 013504 329 --------------LTD---------AKK-----------------FTMILDP----KLEGKYSIKLAQKLAAVANKCLA 364 (441)
Q Consensus 329 --------------~~~---------~~~-----------------~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~ 364 (441)
... ... ......| .+...........+.+++.+||.
T Consensus 408 p~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~ 487 (586)
T KOG0667|consen 408 PPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLE 487 (586)
T ss_pred CHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhc
Confidence 000 000 0000001 00011111234568999999999
Q ss_pred ccCCCCCCHHHHHH--HHHH
Q 013504 365 RQAKGRPKMSEVVE--VLNK 382 (441)
Q Consensus 365 ~dP~~RPs~~evl~--~L~~ 382 (441)
.||.+|+|..++++ +|..
T Consensus 488 ~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 488 WDPAERITPAQALNHPFLTG 507 (586)
T ss_pred cCchhcCCHHHHhcCccccc
Confidence 99999999999998 4553
No 201
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-40 Score=316.75 Aligned_cols=244 Identities=23% Similarity=0.422 Sum_probs=190.4
Q ss_pred eeecccceeEEEEEEcCCC-------------------CcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeE
Q 013504 104 MIGEGGFGGVYRGVIRSTE-------------------DSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKL 164 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~-------------------~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l 164 (441)
.||+|+||.||+|.+..++ .......|++|.+..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5999999999999865322 122345689999876554445678889999999999999999
Q ss_pred EeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 165 IGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 165 ~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
++++..... .++||||+++|+|..++... .+.+++..++.++.||+.||.|||++ +|+||||||+|||++..
T Consensus 82 ~~~~~~~~~----~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGSE----NIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCCc----eEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999987664 49999999999999988643 45789999999999999999999988 99999999999999764
Q ss_pred C-------cEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHH-hCCCCCCCCCc
Q 013504 245 W-------NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELI-TGRRPLDRNRP 315 (441)
Q Consensus 245 ~-------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~ell-tG~~P~~~~~~ 315 (441)
+ .+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||.....
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred CcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 3 3899999988643221 22457888999998865 56899999999999999995 69999975543
Q ss_pred hhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 316 KSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
.......... .. .+......+.+++.+||+.+|++||++.+|++.|
T Consensus 228 ~~~~~~~~~~---------------~~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 SEKERFYEKK---------------HR----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHHHhc---------------cC----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 3222111100 00 0111234688999999999999999999999876
No 202
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.5e-40 Score=324.50 Aligned_cols=256 Identities=22% Similarity=0.343 Sum_probs=196.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||++.+..++.. ||+|++.+... ...+.+.+|+.++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQV-----YAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCE-----EEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-
Confidence 4789999999999999999998876653 99999865321 22355778999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 75 ---NLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred ---eEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 459999999999999999653 45789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
++........ .......||+.|+|||++.. ..++.++|||||||++|+|++|+.||...........+.
T Consensus 148 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~----- 221 (331)
T cd05597 148 SCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM----- 221 (331)
T ss_pred ceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHH-----
Confidence 9875433221 12233579999999999863 457889999999999999999999997543322111110
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCC--CCCCHHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAK--GRPKMSEVVEV 379 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 379 (441)
...... .+. .....++..+.+++.+||+.+++ .||++.+++..
T Consensus 222 -~~~~~~------~~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 222 -NHKEHF------QFP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -cCCCcc------cCC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000000 000 01112567788999998865443 37899998884
No 203
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.7e-40 Score=316.94 Aligned_cols=276 Identities=25% Similarity=0.400 Sum_probs=204.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+.|++.+.||+|+||.||++.+...+. .....||+|.+.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~- 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN- 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCC-CccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC-
Confidence 457888999999999999998653221 223459999987543 23346788999999999999999999998775332
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.++|+|||++
T Consensus 82 -~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 -GIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred -ceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 358999999999999999653 34689999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCc-ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc--c
Q 013504 256 RLGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD--A 332 (441)
Q Consensus 256 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~ 332 (441)
+........ .......++..|+|||++.+..++.++|||||||++|+|++++.|........ ... ..+.... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~-~~~---~~~~~~~~~~ 232 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF-LKM---IGPTHGQMTV 232 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh-hhh---cccccccccH
Confidence 865433211 11224567778999999988889999999999999999999877653211000 000 0000000 0
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
......+........+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000000000111224567899999999999999999999999999876
No 204
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.9e-40 Score=313.05 Aligned_cols=251 Identities=29% Similarity=0.501 Sum_probs=195.9
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCeeEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
+||+|+||.||+|.+..++.. ..+++|.+.... ......+.+|+.++.++ +||||+++++++..... .++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~----~~lv 74 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY----LYLA 74 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCe---eEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCC----ceEE
Confidence 689999999999998765432 347888887433 23345788999999999 89999999999987654 4999
Q ss_pred EeccCCCChHHHHhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcE
Q 013504 182 YEYMPNRSVQDHLTSRF--------------QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~ 247 (441)
|||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+|||+++++.+
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~ 151 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 151 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeE
Confidence 99999999999996532 13578999999999999999999988 99999999999999999999
Q ss_pred EEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhh
Q 013504 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVR 326 (441)
Q Consensus 248 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~ 326 (441)
||+|||++...... ........+..|+|||++....++.++|||||||++|||++ |..||....... ......
T Consensus 152 kl~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~~~ 225 (270)
T cd05047 152 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEKLP 225 (270)
T ss_pred EECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HHHHHh
Confidence 99999998632211 11112234567999999988889999999999999999997 999996543221 111111
Q ss_pred hhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 327 PHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
.. .....+..++..+.+++.+||..+|.+||++.+++..|+.++
T Consensus 226 ~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 226 QG--------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CC--------------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00 000111234567889999999999999999999999999875
No 205
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3e-40 Score=312.65 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=191.2
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
.||+|+||.||+|.+..... ...+++|.+..... .....+.+|+.+++.++||||+++++++.+... .++||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~lv~ 74 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYT---PAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP----YLLVM 74 (269)
T ss_pred cccccCCceEEEEEEcCCCC---ceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCC----cEEEE
Confidence 59999999999998754322 23489998876543 233568889999999999999999999877654 48999
Q ss_pred eccCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 183 EYMPNRSVQDHLTSRF---QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 183 E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
||+++|+|.+++.... ....++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999999997532 23466778889999999999999998 99999999999999999999999999997544
Q ss_pred CCCCcceeeceecccCcCCccccccC-------CCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQTG-------RLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
............|+..|+|||++.+. .++.++||||||+++|||++ |..||........... ....
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~--~~~~---- 225 (269)
T cd05087 152 KEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY--TVRE---- 225 (269)
T ss_pred CcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH--Hhhc----
Confidence 33222222345678899999988642 35789999999999999996 9999965443221111 0000
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.......+.+ ....+..+.+++..|+ .+|++||++.+|+..|+
T Consensus 226 --~~~~~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 --QQLKLPKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred --ccCCCCCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 0000111111 1124456888999999 68999999999998874
No 206
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6.9e-41 Score=314.64 Aligned_cols=252 Identities=33% Similarity=0.553 Sum_probs=202.1
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhH--HHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHK--EWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
|++++.||+|+||.||++....++. .+|+|.+......... ...+|+.++++++||||+++++++....
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~---- 71 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQ-----KVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN---- 71 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTE-----EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS----
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCe-----EEEEEEeccccccccccchhhhhhhccccccccccccccccccccc----
Confidence 6778899999999999999887765 3999999877644332 3456999999999999999999998855
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.. ...+++..++.++.|++.||.+||+. +|+|+||||+||+++.++.++|+|||.+.
T Consensus 72 ~~~~v~~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 72 YLYIVMEYCPGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEEEEETTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 35899999999999999983 36889999999999999999999998 99999999999999999999999999997
Q ss_pred CCCCCCCcceeeceecccCcCCccccc-cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh-hcccccc
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQ-TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP-HLTDAKK 334 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~-~~~~~~~ 334 (441)
.... .........+|..|+|||++. +..++.++||||||+++++|++|..||................. ......
T Consensus 147 ~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 223 (260)
T PF00069_consen 147 KLSE--NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS- 223 (260)
T ss_dssp ESTS--TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT-
T ss_pred cccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc-
Confidence 5311 122345578899999999998 78899999999999999999999999986532233222221111 000000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.........+.+++.+||+.||++||++.++++
T Consensus 224 -----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 224 -----------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -----------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -----------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000011278999999999999999999999885
No 207
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.5e-41 Score=353.83 Aligned_cols=258 Identities=26% Similarity=0.429 Sum_probs=200.6
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|.+.+.||+|+||.||+|.+..++. .+|+|.+..... .....+..|+.+|..++|||||+++++|...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~-----~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de 84 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQE-----FFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK 84 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCe-----EEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec
Confidence 445789999999999999999999877654 488888865432 2346788999999999999999999998765
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCC----CCeEecccCCCcEEEcC--
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRF--QATLPWNTRLKIAQDAARGLAYLHEGMD----FQIIFRDFKSSNILLDE-- 243 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~----~~iiHrDlKp~NILl~~-- 243 (441)
... .+||||||+++|+|.++|.... ...+++..++.|+.||+.||.|||+... .+||||||||+||||+.
T Consensus 85 ~~~--~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 85 ANQ--KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred CCC--EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 433 4699999999999999997532 3579999999999999999999998421 25999999999999964
Q ss_pred ---------------CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhC
Q 013504 244 ---------------QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITG 306 (441)
Q Consensus 244 ---------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG 306 (441)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||||||+|++|
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred cccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence 2348999999998653321 2334679999999999864 4588999999999999999999
Q ss_pred CCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 307 RRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 307 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..||....... .++..+.. . +.+. ....+..+.+||..||..+|.+||++.+++.
T Consensus 240 k~PF~~~~~~~--qli~~lk~----~--------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 240 KTPFHKANNFS--QLISELKR----G--------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCcCCcHH--HHHHHHhc----C--------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 99996543211 11111110 0 0000 0123567899999999999999999999995
No 208
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.3e-40 Score=322.22 Aligned_cols=256 Identities=20% Similarity=0.334 Sum_probs=196.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||++.+..++. .+|+|.+.+... .....+..|+.++..++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADK-----VFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN- 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCC-----EEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-
Confidence 478999999999999999999877654 399999864321 12344778999999999999999999988765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+++|+|.+++... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 75 ---NLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred ---EEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 359999999999999999753 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
++....... ........||+.|+|||++. ...++.++|||||||++|||++|+.||........... +..
T Consensus 148 ~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~---i~~- 222 (332)
T cd05623 148 SCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMN- 222 (332)
T ss_pred hheecccCC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH---HhC-
Confidence 987543322 12233467999999999986 34688999999999999999999999975433221111 100
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCC--CCCHHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKG--RPKMSEVVEV 379 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 379 (441)
..... .. ......++..+.+++.+|++.++.. |+++.++++.
T Consensus 223 --~~~~~------~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 223 --HKERF------QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred --CCccc------cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00000 00 0111235677889999988654444 6889999875
No 209
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6e-41 Score=326.53 Aligned_cols=261 Identities=27% Similarity=0.496 Sum_probs=218.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+.....++||.|-||.||+|++.... ......||||.-+... ....+.|+.|..+|+.++||||++++|+|.+..
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P--- 464 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP--- 464 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc---
Confidence 44556678999999999999987653 3345669999988743 344678999999999999999999999998754
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.+||||+++-|.|..||+.+ ...++......+++||+.+|.|||+. .+|||||...|||+.....|||+|||++
T Consensus 465 --~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 465 --MWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred --eeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchh
Confidence 38999999999999999865 46899999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....+.... .+...-..-|||||-+.-..++.++|||.|||++||++. |..||.+....+
T Consensus 539 R~~ed~~yYk-aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------- 600 (974)
T KOG4257|consen 539 RYLEDDAYYK-ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------- 600 (974)
T ss_pred hhccccchhh-ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-----------------
Confidence 9876654332 334455678999999999999999999999999999987 999997543322
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
.-..+....+...+++|++.|..|+.+||..+|.+||.+.++...|.+++.
T Consensus 601 VI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 601 VIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred eEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 111222233456777899999999999999999999999999999988875
No 210
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=299.68 Aligned_cols=253 Identities=30% Similarity=0.484 Sum_probs=199.7
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCC-CCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ 173 (441)
.++.+.+..||+|+.|.|+++.++.++.. +|||.+.+.... ..++++..+.++...+ +|.||+.+|||..+..
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~i-----iAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHI-----IAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceE-----EEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 35566677799999999999999988765 999999887644 4577888888887764 9999999999998776
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. ++.||.| ..-++. |..+..+++++..+-++...++.||.||-.+ .+|||||+||+|||||+.|++||||||
T Consensus 166 V----~IcMelM-s~C~ek-Llkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFG 237 (391)
T KOG0983|consen 166 V----FICMELM-STCAEK-LLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFG 237 (391)
T ss_pred H----HHHHHHH-HHHHHH-HHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeeccc
Confidence 5 7789987 323333 4344567899999999999999999999987 499999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
++..+.... ..+...|-+.|||||.+.- ..|+.++||||||+.++||.||+.||...... ...+..+..
T Consensus 238 IsGrlvdSk---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~ltkvln--- 309 (391)
T KOG0983|consen 238 ISGRLVDSK---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEVLTKVLN--- 309 (391)
T ss_pred ccceeeccc---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHHHHHHHh---
Confidence 998765543 2344678899999998864 46899999999999999999999999764321 111111111
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...|.+.+ ...+++.+.+++..||.+|+.+||.+.++++
T Consensus 310 -------~ePP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 310 -------EEPPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred -------cCCCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 11122322 2238889999999999999999999999886
No 211
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.3e-40 Score=309.02 Aligned_cols=251 Identities=22% Similarity=0.387 Sum_probs=202.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|++|.||++.+..++. .+++|.+..... ...+.+.+|+.++++++||||+++++.+...+.
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~-- 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGK-----QYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDG-- 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCc-----EEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCC--
Confidence 48889999999999999999876654 389999865432 234567889999999999999999988754332
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..|+||||+++++|.+++.......+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 74 -~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 74 -LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred -EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 358999999999999999875556799999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......|++.|+|||++.+..++.++||||||+++++|++|+.||.......... ......
T Consensus 150 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~--~~~~~~------- 218 (257)
T cd08223 150 RVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVY--RIIEGK------- 218 (257)
T ss_pred EEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHhcC-------
Confidence 8653322 12334678999999999999999999999999999999999999997543211110 000000
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
....+..++..+.+++.+||+.+|++||++.++++
T Consensus 219 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 219 --------LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --------CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 01122346678999999999999999999999986
No 212
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.1e-40 Score=313.40 Aligned_cols=255 Identities=29% Similarity=0.503 Sum_probs=198.9
Q ss_pred ceeecccceeEEEEEEcCCCC-cccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTED-SHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLL 180 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~l 180 (441)
+.||+|+||.||+|.+..... ......+++|.+..... .....+.+|+.+++.++||||+++++++...+. .++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~~ 76 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP----QYI 76 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCC----eEE
Confidence 369999999999998765331 12234588888765432 335678899999999999999999999876653 499
Q ss_pred EEeccCCCChHHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC-----cEEEe
Q 013504 181 IYEYMPNRSVQDHLTSRF-----QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-----NAKLS 250 (441)
Q Consensus 181 v~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~-----~~kl~ 250 (441)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++ .++|+
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEEC
Confidence 999999999999997532 23478899999999999999999988 999999999999999887 89999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|||+++...............++..|+|||++.++.++.++|||||||++|+|++ |..||....... ....+..
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~-- 228 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---VLQHVTA-- 228 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---HHHHHhc--
Confidence 9999976543322222233456788999999999999999999999999999998 999996543222 1111110
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. .....+..++..+.+++.+||..+|.+||++.+|++.|+
T Consensus 229 --~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 --G----------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred --C----------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 001122345678899999999999999999999999886
No 213
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.9e-40 Score=306.66 Aligned_cols=248 Identities=29% Similarity=0.502 Sum_probs=197.9
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
++||.|+||.||+|.+.. +. .|++|.+...... ....+.+|+.+++.+.||||+++++++..... .++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~-----~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----~~~v 70 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NT-----EVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQP----IYIV 70 (251)
T ss_pred CccccCCCceEEEEEEeC-CC-----cEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCC----eEEE
Confidence 369999999999999765 33 3999988765443 45678899999999999999999999887664 4999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++++|.+++... ...+++..++.++.+++.||.|||++ +++||||||+|||++.++.++|+|||++......
T Consensus 71 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 71 MELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred EEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 9999999999999654 34688999999999999999999998 9999999999999999999999999999865422
Q ss_pred CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcC
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD 340 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (441)
..........++..|+|||.+.++.++.++|||||||++|+|++ |..||...........+. ..
T Consensus 147 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~---~~------------ 211 (251)
T cd05041 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE---SG------------ 211 (251)
T ss_pred cceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh---cC------------
Confidence 21111122334667999999988899999999999999999999 888986554322221111 00
Q ss_pred CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 341 PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 341 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.....+...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 212 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 212 --YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 001122345678999999999999999999999999886
No 214
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.9e-40 Score=314.97 Aligned_cols=250 Identities=24% Similarity=0.430 Sum_probs=199.3
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
|++.+.||.|+||.||+|.+..++. .+++|.+..........+.+|+.+++.++||||+++++++.... ..
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~~ 77 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGV-----LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN----NL 77 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCe-----EEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC----EE
Confidence 5777889999999999999877654 38888887665555677889999999999999999999988765 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
++||||+++++|..++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 78 ~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 78 WILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 9999999999999887643 35789999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
... ........||+.|+|||++. +..++.++|||||||++|+|++|..||....... .........
T Consensus 154 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~~~----- 224 (282)
T cd06643 154 TRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSE----- 224 (282)
T ss_pred ccc--ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHHHHhhcC-----
Confidence 322 11233467899999999874 3457789999999999999999999996543221 111111000
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+. ...+..++..+.+++.+||..+|.+||++.++++
T Consensus 225 ------~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 225 ------PPT--LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ------CCC--CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0112235678999999999999999999998876
No 215
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.2e-41 Score=315.02 Aligned_cols=245 Identities=24% Similarity=0.438 Sum_probs=192.6
Q ss_pred eeecccceeEEEEEEcCCCC--cccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTED--SHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
.||+|+||.||+|.....+. ......+++|.+........+.+..|+.+++.+.||||+++++++...... ++|
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~----~lv 77 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDES----IMV 77 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCc----EEE
Confidence 59999999999998865432 223445888888665544556788999999999999999999999876543 899
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc--------EEEeecC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN--------AKLSDFG 253 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~--------~kl~DFG 253 (441)
|||+++|+|.+++..+ +..+++..++.++.||+.||.|||++ +|+||||||+|||++.++. ++++|||
T Consensus 78 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 78 QEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999999754 34689999999999999999999998 9999999999999987765 6999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCC-CCCCCCCchhHHHHHHhhhhhccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGR-RPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~-~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
++..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|. .||............. .
T Consensus 154 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-------~ 220 (258)
T cd05078 154 ISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-------D 220 (258)
T ss_pred cccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-------c
Confidence 8875432 233568899999999876 45789999999999999999984 6665433222111110 0
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. ...+......+.+++.+||+.+|++||+++++++.|+
T Consensus 221 ~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 R------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred c------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0111223457899999999999999999999998863
No 216
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=338.96 Aligned_cols=262 Identities=26% Similarity=0.470 Sum_probs=218.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
...+.++||.|.||+||+|.++..++ ....||||.++.-.. +...+|+.|+.||.++.||||++|.|+.......
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgk--re~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv-- 705 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGK--REITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV-- 705 (996)
T ss_pred heEEEEEEecccccceecccccCCCC--cceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee--
Confidence 45577899999999999999987653 355799999986543 3456799999999999999999999999876654
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.||+|||++|+|..||..+. +.|.+.+...++++|+.|++||-+. +.|||||...|||++.|..+|++|||++|
T Consensus 706 --MIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSR 779 (996)
T KOG0196|consen 706 --MIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 779 (996)
T ss_pred --EEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEecccccee
Confidence 89999999999999998775 5699999999999999999999976 99999999999999999999999999999
Q ss_pred CCCCCCCcc-eeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 257 LGPSDGLSH-VSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 257 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
.+.++.... ......-...|.|||.+...+++.++||||||+++||.++ |..||.+....+..+.++
T Consensus 780 vledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe----------- 848 (996)
T KOG0196|consen 780 VLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE----------- 848 (996)
T ss_pred ecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHH-----------
Confidence 764433111 1111222468999999999999999999999999999887 999997665444333222
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
...+-..+.+|+..|.+|+..||++|-.+||.+.+|+..|++++.+
T Consensus 849 ------~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 849 ------QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred ------hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 1223345568999999999999999999999999999999999864
No 217
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-40 Score=314.02 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=200.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|.+.+.||+|+||.||+|.+..++. .||+|.+..........+.+|+.+++.++||||+++++++...+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--- 79 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGE-----LAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--- 79 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCc-----EEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC---
Confidence 3578888899999999999998876654 38999987655445566788999999999999999999987765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.. .+.+++.+++.++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 80 -KLWICMEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred -EEEEEEeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceee
Confidence 35999999999999999875 35789999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
...... ........|++.|+|||++. ...++.++|||||||++|+|++|..||....+........ ...
T Consensus 154 ~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~--~~~---- 225 (267)
T cd06645 154 AQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT--KSN---- 225 (267)
T ss_pred eEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh--ccC----
Confidence 754322 11223457899999999874 4568889999999999999999999986543322111100 000
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...+... ....++..+.+++.+||..+|++||++.+|++
T Consensus 226 -----~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 226 -----FQPPKLK--DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -----CCCCccc--ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0001110 01124567889999999999999999999875
No 218
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.2e-40 Score=315.56 Aligned_cols=276 Identities=25% Similarity=0.422 Sum_probs=207.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+|...+.||+|+||.||+|.+.... ......+|||.+...... ....+.+|+.+++.+.||||+++++++......
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~- 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR- 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC-
Confidence 45777889999999999999876442 123446999998765543 456789999999999999999999998764432
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++
T Consensus 82 -~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 -SLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred -ceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 458999999999999999764 23689999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCc-ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh--cccc
Q 013504 256 RLGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH--LTDA 332 (441)
Q Consensus 256 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~--~~~~ 332 (441)
......... .......++..|++||.+.+..++.++||||||++++||++|..|+......... +.... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~ 232 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR----MIGIAQGQMIV 232 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc----ccccccccccH
Confidence 876532211 1112234566799999998889999999999999999999999998543221100 00000 0000
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
......+........+..++..+.+++.+||..+|++||++.+|+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 233 TRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000001111111112234557899999999999999999999999999875
No 219
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=329.47 Aligned_cols=246 Identities=32% Similarity=0.454 Sum_probs=203.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
+-|.-.+.||.|+||.||-+.+..+... ||||++.-...+. +..++.|+..|++++|||++.+.|+|..+..
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~ev-----VAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~T 100 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEV-----VAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHT 100 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccce-----eeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccch
Confidence 3466677899999999999998877765 9999998766543 5678899999999999999999999987664
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.+|||||| -|+-.|.+.-. .+++.+..+..|+.+.+.||.|||+. +.||||||..||||++.|.|||+|||
T Consensus 101 ----aWLVMEYC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFG 171 (948)
T KOG0577|consen 101 ----AWLVMEYC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFG 171 (948)
T ss_pred ----HHHHHHHH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeecccc
Confidence 39999999 56777877543 47899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
.|.... ..++++|||.|||||++. .+.|+-++||||||+++.||.-.++|+...+..... .. +.
T Consensus 172 SAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL--YH-IA---- 238 (948)
T KOG0577|consen 172 SASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YH-IA---- 238 (948)
T ss_pred chhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH--HH-HH----
Confidence 987643 356799999999999874 578999999999999999999999998765432211 11 10
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..-.|-+ ...+++..+..++..||++-|.+|||.++++.
T Consensus 239 ------QNesPtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 239 ------QNESPTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred ------hcCCCCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 0001111 24578899999999999999999999999886
No 220
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.9e-40 Score=323.80 Aligned_cols=256 Identities=21% Similarity=0.335 Sum_probs=196.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||++.+..++.. ||+|.+..... .....+.+|+.++..++|+||+++++++...+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~- 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERI-----YAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCE-----EEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 4789999999999999999998776543 99999865321 22345778999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||++||+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 ---~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 75 ---YLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred ---EEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 359999999999999999753 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
+++....... .......||+.|+|||++.+ +.++.++|||||||++|+|++|+.||........... +..
T Consensus 148 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~---i~~- 222 (331)
T cd05624 148 SCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMN- 222 (331)
T ss_pred ceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHH---HHc-
Confidence 9976543321 12234679999999999875 5678899999999999999999999975443221111 100
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCC--CCCHHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKG--RPKMSEVVEV 379 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 379 (441)
..... .+. .....++..+.+++.+||+.++++ |++++++++.
T Consensus 223 --~~~~~------~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 223 --HEERF------QFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred --CCCcc------cCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00000 000 011234678889999999865544 4678888763
No 221
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.2e-40 Score=317.16 Aligned_cols=250 Identities=26% Similarity=0.446 Sum_probs=204.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|++.+.||.|+||.||+|....++.. |++|.+........+.+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~-----v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 89 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQE-----VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD---- 89 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcE-----EEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc----
Confidence 4699999999999999999987766543 9999887665555677889999999999999999999997655
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.. ..+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.
T Consensus 90 ~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred eEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 45999999999999999865 4689999999999999999999998 99999999999999999999999999988
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
....... ......|++.|+|||.+.+..++.++|||||||++|+|++|..||............. ....
T Consensus 164 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~---~~~~------ 232 (296)
T cd06655 164 QITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGT------ 232 (296)
T ss_pred hcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCC------
Confidence 6443221 1234578999999999998889999999999999999999999997654322211111 0000
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+ ....+..++..+.+++.+||..||++||++.+++.
T Consensus 233 ----~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 233 ----P--ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ----c--ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 00112245677889999999999999999999997
No 222
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.2e-40 Score=308.93 Aligned_cols=254 Identities=26% Similarity=0.454 Sum_probs=203.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|.+.+.||+|+||.||+|.+.... .+++|.+.... .....+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~------~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--- 73 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHT------KVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--- 73 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCc------cEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C---
Confidence 467899999999999999999865433 28999876543 234678899999999999999999999876 2
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..+++|||+++++|.+++.......+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 74 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 74 -PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred -CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 248999999999999999765556788999999999999999999988 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
........ .......++..|+|||++....++.++|+|||||++|++++ |..||........ ..+.....
T Consensus 150 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~~~~~~~----- 220 (260)
T cd05073 150 RVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IRALERGY----- 220 (260)
T ss_pred eeccCCCc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---HHHHhCCC-----
Confidence 76533221 11222345678999999988889999999999999999999 9999975433221 11111100
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
........+..+.+++.+||+.+|++||++.+++..|+.
T Consensus 221 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 ---------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---------CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001112355679999999999999999999999999875
No 223
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=320.59 Aligned_cols=250 Identities=28% Similarity=0.443 Sum_probs=207.6
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
.+.|..-++||+||||.||-++.+.++.. +|.|.+.+...+ .....+.|-.||.+++.+.||.+--.|.+.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKM-----YAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKM-----YACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhh-----HHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 36799999999999999999999999876 777776554332 2345678999999999999999977777777
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
. +||||..|+||+|.-+|.+.....|++..++.++.+|+.||.+||.. +||+|||||+|||||+.|+++|+|.
T Consensus 259 ~----LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 A----LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred c----eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 5 49999999999999999887777999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
|+|....... .....+||.+|||||++.++.|+...|+|||||+||||+.|+.||.........+-++ +..+.
T Consensus 332 GLAvei~~g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd--rr~~~-- 404 (591)
T KOG0986|consen 332 GLAVEIPEGK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD--RRTLE-- 404 (591)
T ss_pred ceEEecCCCC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH--HHHhc--
Confidence 9998766543 2344599999999999999999999999999999999999999996543332221111 11111
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 374 (441)
....++..++++..+|....|.+||.+|....
T Consensus 405 ----------~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 405 ----------DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred ----------chhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 12356678899999999999999999997543
No 224
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5e-40 Score=311.08 Aligned_cols=255 Identities=26% Similarity=0.400 Sum_probs=189.5
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
.||+|+||.||+|...... ....+++|.+..... .....+.+|+.+++.++||||+++++++..... .++||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~----~~lv~ 74 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGM---SKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIP----YLLVL 74 (269)
T ss_pred cCCccCCceEEEEEEecCC---CCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCc----eEEEE
Confidence 5999999999999764432 233488888765432 234567899999999999999999999987654 49999
Q ss_pred eccCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 183 EYMPNRSVQDHLTSRF---QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 183 E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
||+++|+|.+++.... ....++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 9999999999997532 13356788899999999999999998 99999999999999999999999999987543
Q ss_pred CCCCcceeeceecccCcCCcccccc-------CCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 260 SDGLSHVSTAVVGTIGYAAPEYIQT-------GRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 260 ~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
............+++.|+|||++.. ..++.++|||||||++|||++ |..||.......... .......
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~--~~~~~~~-- 227 (269)
T cd05042 152 PEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLK--QVVREQD-- 227 (269)
T ss_pred cchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH--HHhhccC--
Confidence 3221112233456778999998743 356789999999999999999 788886543322111 1010000
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
..... ...+..++..+.+++..|+ .||++||++++|++.|.
T Consensus 228 ----~~~~~----~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 ----IKLPK----PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ----ccCCC----CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 00011 1223345677788999998 59999999999999873
No 225
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.8e-40 Score=314.53 Aligned_cols=252 Identities=25% Similarity=0.421 Sum_probs=201.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+.|++.+.||.|+||.||+|.+..++. .+++|.+..........+.+|+.+++.++||||+++++++..+.
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 82 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGA-----LAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG---- 82 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCc-----eEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC----
Confidence 568999999999999999999877654 38999987766555677889999999999999999999987665
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|..++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++.
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 359999999999999887653 35689999999999999999999988 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
..... ........+++.|+|||++. ...++.++|||||||++|+|++|..||....... .........
T Consensus 159 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~--- 231 (292)
T cd06644 159 KNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLLKIAKSE--- 231 (292)
T ss_pred ecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH--HHHHHhcCC---
Confidence 53322 11223457899999999884 3456789999999999999999999996543221 111111000
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+ ....+..++..+.+++.+||..+|++||+++++++
T Consensus 232 --------~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 232 --------PP--TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --------Cc--cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00 00112245567889999999999999999999986
No 226
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.8e-40 Score=314.68 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=202.7
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|++.+.||.|+||.||+|.+..++. .+++|.+..........+.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGL-----FAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN--- 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCc-----EEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC---
Confidence 3568899999999999999999876544 49999987665555677889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+|+||||+||+++.++.++|+|||++
T Consensus 76 -~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 76 -KLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred -eEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 359999999999999998753 35799999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
....... .......||+.|+|||++. ...++.++||||||+++|+|++|+.||........ ........
T Consensus 151 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~-- 224 (280)
T cd06611 151 AKNKSTL--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV--LLKILKSE-- 224 (280)
T ss_pred hhhcccc--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH--HHHHhcCC--
Confidence 7643321 1233467899999999875 34567899999999999999999999975433211 11111000
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+.+ ..+..++..+.+++.+||..+|.+||++.++++
T Consensus 225 ---------~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 225 ---------PPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ---------CCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 0000 112245667889999999999999999999987
No 227
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.2e-40 Score=309.41 Aligned_cols=250 Identities=26% Similarity=0.458 Sum_probs=199.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---------hhHHHHHHHHHhccCCCCCeeeEEeEE
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---------GHKEWVTEVNVLGVVEHPNLVKLIGYC 168 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~E~~il~~l~hpnIv~l~~~~ 168 (441)
+|.+...||.|+||.||+|.+..++. .+++|.+...... ..+.+.+|+.++++++||||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGE-----LMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCc-----EEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 36778899999999999999765544 4899987654322 124577899999999999999999998
Q ss_pred eccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEE
Q 013504 169 AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248 (441)
Q Consensus 169 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~k 248 (441)
...+. .++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++
T Consensus 76 ~~~~~----~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 76 LDADH----LNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred EeCCc----cEEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 87654 4899999999999999976 36789999999999999999999988 999999999999999999999
Q ss_pred EeecCCCCCCCCCCC----cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHh
Q 013504 249 LSDFGLARLGPSDGL----SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 249 l~DFGla~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~ 324 (441)
|+|||+++....... ........|+..|+|||.+.+..++.++|||||||++|+|++|+.||....... .. ..
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~-~~ 223 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ--AI-FK 223 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH--HH-HH
Confidence 999999986542211 111223568899999999998889999999999999999999999997543211 11 10
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
... .. ....+..++..+.+++.+||+.||.+||++.+|++
T Consensus 224 ~~~----------~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 224 IGE----------NA----SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred Hhc----------cC----CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 00 11122345678899999999999999999999886
No 228
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.7e-40 Score=309.27 Aligned_cols=247 Identities=28% Similarity=0.494 Sum_probs=198.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||+|...+. .+++|.+.... ....+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~-------~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---- 72 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQ-------KVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG---- 72 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCC-------ceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC----
Confidence 5688999999999999999875322 38999886532 3457889999999999999999999986543
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++++|.+++.......+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 73 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 73 -LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred -cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 38999999999999999865555789999999999999999999988 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
..... ......+..|+|||.+.+..++.++|||||||++|+|++ |..||............. ..
T Consensus 149 ~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~------- 213 (254)
T cd05083 149 VGSMG-----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE---KG------- 213 (254)
T ss_pred ecccc-----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh---CC-------
Confidence 54321 112334568999999988899999999999999999998 999997554332211111 00
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.....+..++..+.+++.+||+.+|++||++.++++.|++
T Consensus 214 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 214 -------YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -------CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0001122456778999999999999999999999998863
No 229
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.9e-40 Score=307.98 Aligned_cols=254 Identities=27% Similarity=0.406 Sum_probs=205.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|++.+.||.|+||.||+|.+..++. .+++|.+........+.+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~---- 73 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGE-----LVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD---- 73 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCC-----EEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC----
Confidence 578999999999999999999876554 38999987665555678889999999999999999999987655
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..+++|||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+|+||||+||+++.++.++|+|||++.
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 359999999999999998753 25789999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccccC---CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTG---RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
...... .......++..|+|||.+.+. .++.++|||||||++|+|++|..||............. ...+
T Consensus 150 ~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~--~~~~---- 221 (262)
T cd06613 150 QLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLIS--KSNF---- 221 (262)
T ss_pred hhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccC----
Confidence 654321 122346789999999998776 78899999999999999999999997544322211110 0000
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+ .........+..+.+++.+||..+|.+||++++|+.
T Consensus 222 ------~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 222 ------PP-PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred ------CC-ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 011123356678999999999999999999999875
No 230
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.9e-40 Score=306.07 Aligned_cols=246 Identities=29% Similarity=0.510 Sum_probs=194.6
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
+||+|+||.||+|...... .+|+|.+....... ...+.+|+.+++.++||||+++++++..... .++||
T Consensus 2 ~ig~g~~g~vy~~~~~~~~------~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~ 71 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKT------PVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQP----IYIVM 71 (250)
T ss_pred ccCCCCCceEEEEEecCCc------EEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCc----cEEEE
Confidence 6999999999999865322 48999887654322 3467899999999999999999999987654 49999
Q ss_pred eccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCC
Q 013504 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262 (441)
Q Consensus 183 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 262 (441)
||+++++|.+++... ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 72 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 72 ELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred ECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 999999999998654 34688999999999999999999988 99999999999999999999999999987543221
Q ss_pred CcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 263 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
. .......++..|+|||++.+..++.++||||||+++|++++ |..||...........+. ..
T Consensus 148 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~---~~------------- 210 (250)
T cd05085 148 Y-SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE---KG------------- 210 (250)
T ss_pred c-ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH---cC-------------
Confidence 1 11122344677999999998889999999999999999998 999997554322211111 00
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.....+..++..+.+++.+||..+|++||++.++++.|.
T Consensus 211 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 -YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001112235678999999999999999999999998874
No 231
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.4e-40 Score=314.36 Aligned_cols=264 Identities=27% Similarity=0.385 Sum_probs=206.2
Q ss_pred chHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEe
Q 013504 88 TFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIG 166 (441)
Q Consensus 88 ~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 166 (441)
++.++......|++.+.||.|+||.||+|.+..++. .+|+|.+.... .....+..|+.++.++ +||||+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~ 80 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQ-----LAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYG 80 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCc-----EEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEee
Confidence 444555667899999999999999999999876654 38999876543 2345678899999998 7999999999
Q ss_pred EEecccc--CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 167 YCAEDDE--RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 167 ~~~~~~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
++..... .....|++|||+++|+|.+++.......+++..++.++.||+.||.|||+. +|+|+||||+||+++++
T Consensus 81 ~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 81 AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred ehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 9864321 123569999999999999999765556788999999999999999999998 99999999999999999
Q ss_pred CcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH
Q 013504 245 WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~ 319 (441)
+.++|+|||++....... .......|++.|+|||.+. ...++.++|||||||++|+|++|..||....+....
T Consensus 158 ~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~ 235 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL 235 (282)
T ss_pred CCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh
Confidence 999999999987543221 1223467899999999875 346788999999999999999999999654322111
Q ss_pred HHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 320 KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..... ..........++..+.+++.+||..||.+||++.++++
T Consensus 236 ~~~~~----------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 FLIPR----------------NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhHhh----------------CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11100 00001111245678999999999999999999999875
No 232
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-40 Score=316.80 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=204.3
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
..+|.+.+.||+|+||.||+|....++. .||+|.+........+.+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--- 89 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQ-----EVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--- 89 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCC-----EEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 3689999999999999999999766554 39999987665555677889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++
T Consensus 90 -~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 90 -ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred -EEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccc
Confidence 45999999999999999865 4688999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......+++.|+|||.+.+..++.++|||||||++|+|++|..||....+...... ..
T Consensus 163 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~--~~---------- 228 (297)
T cd06656 163 AQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL--IA---------- 228 (297)
T ss_pred eEccCCc--cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee--ec----------
Confidence 7643322 112345789999999999988899999999999999999999999965432111000 00
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.........+...+..+.+++.+||..+|++||++.++++
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 229 ---TNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000001122345677899999999999999999999998
No 233
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-39 Score=315.69 Aligned_cols=201 Identities=27% Similarity=0.432 Sum_probs=161.1
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
...||+|+||.||+|.+..... ...+|+|.+..... ...+.+|+.+|++++||||+++++++...... ..++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~---~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKD---DRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADR--KVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCC---CceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCc--EEEEE
Confidence 3579999999999998764321 23599999865432 34567899999999999999999998754433 46899
Q ss_pred EeccCCCChHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE----cCCCcEEEe
Q 013504 182 YEYMPNRSVQDHLTSR-------FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL----DEQWNAKLS 250 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl----~~~~~~kl~ 250 (441)
|||+. ++|.+++... ....+++..+..++.||+.||.|||++ +|+||||||+|||+ +.++.+||+
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 79 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 99994 5888887532 123588999999999999999999998 99999999999999 456789999
Q ss_pred ecCCCCCCCCCCC-cceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCC
Q 013504 251 DFGLARLGPSDGL-SHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRN 313 (441)
Q Consensus 251 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~ 313 (441)
|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|+|++|++||...
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9999986543221 112234688999999999876 45899999999999999999999999643
No 234
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.9e-41 Score=326.35 Aligned_cols=241 Identities=27% Similarity=0.383 Sum_probs=187.0
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccC---CCCCeeeEEeEEeccccCCeeE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVV---EHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
||+|+||.||+|.+..++.. ||+|++...... ....+..|..++..+ +||||+++++++...+. .
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~----~ 71 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRI-----YAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSD----L 71 (330)
T ss_pred CCCCCceEEEEEEECCCCCE-----EEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCe----E
Confidence 79999999999998776554 999998654322 223445677777655 79999999999987663 4
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 72 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 72 YLVTDYMSGGELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEEcCCCCChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 999999999999999875 46789999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
.... .......||+.|+|||++.+. .++.++|||||||++|+|++|..||........ ...+... .
T Consensus 147 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~---~~~i~~~---~----- 213 (330)
T cd05586 147 LTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM---YRNIAFG---K----- 213 (330)
T ss_pred CCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH---HHHHHcC---C-----
Confidence 3221 123456799999999998754 488999999999999999999999965432221 1111000 0
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC----CHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP----KMSEVVE 378 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 378 (441)
..+. ...++..+.+++.+||+.||.+|| ++.++++
T Consensus 214 ---~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 214 ---VRFP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ---CCCC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0000 012456788999999999999998 5666665
No 235
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=8.7e-40 Score=306.90 Aligned_cols=251 Identities=24% Similarity=0.393 Sum_probs=203.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|+..+.||.|+||.||.+....++. .+++|.+.... ......+.+|+.++++++|+||+++++++.+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--- 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDS-----LVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN--- 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCc-----EEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC---
Confidence 48889999999999999998776554 38888876543 233467889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++
T Consensus 73 -~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 73 -TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred -eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 459999999999999999875456789999999999999999999988 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......|++.|+|||++.+..++.++||||||+++|+|++|..||...........+. ..
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~--~~-------- 216 (256)
T cd08221 149 KILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIV--QG-------- 216 (256)
T ss_pred EEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH--cC--------
Confidence 86543321 2334678999999999988889999999999999999999999996543322111110 00
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. ......++..+.+++.+||+.+|.+||++.++++.
T Consensus 217 ------~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 217 ------NY-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ------CC-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 00 01113456778999999999999999999999874
No 236
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1e-39 Score=308.57 Aligned_cols=253 Identities=26% Similarity=0.424 Sum_probs=197.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-----hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-----QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
.+|...+.||+|+||.||+|....++. .|++|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGR-----ELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCc-----EEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence 478999999999999999999876654 389998764321 2234678899999999999999999988754
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
... ..+++|||+++++|.+++.. ...+++...+.++.|++.||.|||+. +|+||||||+||+++.++.++|+|
T Consensus 77 ~~~--~~~l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 77 AEK--TLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CCC--EEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 322 45899999999999999975 35689999999999999999999988 999999999999999999999999
Q ss_pred cCCCCCCCCCCC-cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 252 FGLARLGPSDGL-SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 252 FGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
||+++....... ........++..|+|||++.+..++.++|||||||++|+|++|+.||......... .. ...
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~--~~-~~~--- 223 (266)
T cd06651 150 FGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI--FK-IAT--- 223 (266)
T ss_pred CCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH--HH-Hhc---
Confidence 999875432111 11112356889999999999888999999999999999999999999654321111 10 000
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.......+..+...+.+++ +||..+|++||++++|++
T Consensus 224 ----------~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 224 ----------QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ----------CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0001122334556677787 688899999999999976
No 237
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.3e-40 Score=324.76 Aligned_cols=268 Identities=24% Similarity=0.328 Sum_probs=199.3
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|.+.+.||+|+||.||+|.+..++. .||||.+..... .....+.+|+.+|+.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQ-----KVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA 86 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCC-----EEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence 356789999999999999999999876654 399999875432 2335677899999999999999999988643
Q ss_pred cc--CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 172 DE--RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 172 ~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
.. .....|++||++ +++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||
T Consensus 87 ~~~~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl 159 (343)
T cd07878 87 TSIENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRI 159 (343)
T ss_pred ccccccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEE
Confidence 22 122458999988 8899888754 4699999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH-Hhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRP 327 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~ 327 (441)
+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...........+ .....
T Consensus 160 ~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07878 160 LDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234 (343)
T ss_pred cCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999865332 234678999999999876 56889999999999999999999999754432211111 10000
Q ss_pred hccc------ccchhhhcC--CCCCC----cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTD------AKKFTMILD--PKLEG----KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~------~~~~~~~~~--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.... ......... +.... .......+.+.+|+.+||..||.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000000000 00000 000112346789999999999999999999997
No 238
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.2e-40 Score=316.36 Aligned_cols=266 Identities=23% Similarity=0.380 Sum_probs=199.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|.+.+.||+|+||.||+|.+..++. .||+|.+...... ....+.+|+.+++.++||||+++++++....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~--- 77 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDN-----LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK--- 77 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCc-----EEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC---
Confidence 578999999999999999999876654 3999988654322 2345778999999999999999999998665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||++ ++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++
T Consensus 78 -~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 78 -SLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred -eEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 3599999996 5999888654 45688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh-ccc--
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH-LTD-- 331 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-~~~-- 331 (441)
....... .......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+...... ...
T Consensus 152 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 229 (301)
T cd07873 152 RAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW 229 (301)
T ss_pred hccCCCC--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhc
Confidence 7543221 11233467899999998865 35788999999999999999999999765433222111111000 000
Q ss_pred -----ccchhhhcCCCCCC----cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 -----AKKFTMILDPKLEG----KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 -----~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...+.....+.... .....+++.+.+|+.+||+.||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 230 PGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000000011100 111234667899999999999999999999997
No 239
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=8.8e-40 Score=311.81 Aligned_cols=266 Identities=23% Similarity=0.327 Sum_probs=197.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQ-----IVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES--- 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCc-----EEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC---
Confidence 57888999999999999999876654 499998865432 22356788999999999999999999998755
Q ss_pred eeEEEEEeccCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF-QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||++ ++|.+++.... +..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.++|+|||+
T Consensus 73 -~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 147 (285)
T cd07861 73 -RLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGL 147 (285)
T ss_pred -eEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccc
Confidence 3599999996 68988886532 36789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhhh-----
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRP----- 327 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~~----- 327 (441)
+....... .......+++.|+|||++.+. .++.++|||||||++|+|++|+.||........... ......
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T cd07861 148 ARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDV 225 (285)
T ss_pred eeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 87543221 122334678999999988654 478899999999999999999999975443221111 110000
Q ss_pred --hcccccchhhhcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 --HLTDAKKFTMILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 --~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.......+....+..... .....+++++.+++.+||+.||++||++.+|+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 226 WPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000000000000 011125678889999999999999999999875
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.2e-40 Score=309.43 Aligned_cols=256 Identities=24% Similarity=0.398 Sum_probs=200.6
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
+..++++.....||+|+||.||+|.+..++. .|++|.+........+.+.+|+.+++.++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQV-----RIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCc-----EEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC
Confidence 3445666677789999999999999876554 49999887766556678899999999999999999999988765
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC-CCcEEE
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATL--PWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAKL 249 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~-~~~~kl 249 (441)
..++||||+++++|.+++.... ..+ ++..+..++.||+.||.|||++ +|+||||||+||+++. ++.++|
T Consensus 79 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l 150 (268)
T cd06624 79 ----FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKI 150 (268)
T ss_pred ----EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEE
Confidence 3599999999999999997542 344 7888999999999999999998 9999999999999976 678999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR--LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
+|||++....... .......|++.|+|||++.... ++.++||||||+++|+|++|..||.......... +...
T Consensus 151 ~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~---~~~~ 225 (268)
T cd06624 151 SDFGTSKRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM---FKVG 225 (268)
T ss_pred ecchhheecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH---hhhh
Confidence 9999987543221 1122346899999999986644 7889999999999999999999996432211110 0000
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. ......+..+++.+.+++.+||+.+|.+||++.+++.
T Consensus 226 ~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 226 MF------------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hh------------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 0011223345678999999999999999999999886
No 241
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=7.5e-40 Score=319.05 Aligned_cols=264 Identities=21% Similarity=0.298 Sum_probs=195.6
Q ss_pred ccceeecc--cceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 101 RSLMIGEG--GFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 101 ~~~~LG~G--~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+..+||+| +||+||++....++.. ||+|.+..... .....+.+|+.+++.++||||+++++++..++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~--- 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEY-----VTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE--- 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcE-----EEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCE---
Confidence 45679999 7899999998877664 99999875432 223456789999999999999999999987663
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++|+|.+++..+....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.++++|||.+.
T Consensus 74 -~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 74 -LWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred -EEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 59999999999999999765456789999999999999999999998 99999999999999999999999998654
Q ss_pred CCCCCCCc-----ceeeceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhc
Q 013504 257 LGPSDGLS-----HVSTAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 257 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
........ .......++..|+|||++.+ ..++.++|||||||++|||++|..||........ .........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 227 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTV 227 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHHhcCCc
Confidence 33211110 01122356788999999876 4588999999999999999999999975332111 111110000
Q ss_pred c---cc-----cch----------------------hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 330 T---DA-----KKF----------------------TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 330 ~---~~-----~~~----------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. +. ... ...............+++.+.+++.+||+.||++|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 228 PCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 00 000 0000000001122345678999999999999999999999997
No 242
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.8e-40 Score=307.34 Aligned_cols=250 Identities=28% Similarity=0.445 Sum_probs=203.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|+..+.||+|+||.||+|.+..++. .+++|.+..... ...+.+|+.+++.++||||+++++++....
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~---- 71 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQ-----VVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT---- 71 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCc-----EEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC----
Confidence 578999999999999999999876543 389998865432 567889999999999999999999998765
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..|++|||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|||++.
T Consensus 72 ~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 72 DLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred cEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 359999999999999998653 46789999999999999999999998 99999999999999999999999999988
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||....+....... ..
T Consensus 148 ~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~---~~--------- 213 (256)
T cd06612 148 QLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI---PN--------- 213 (256)
T ss_pred hcccCc--cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh---cc---------
Confidence 654332 1223456899999999999989999999999999999999999999754332211110 00
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........+..++..+.+++.+||+.+|++||++.+++.
T Consensus 214 ---~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 214 ---KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000011123345678999999999999999999999986
No 243
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.3e-39 Score=307.45 Aligned_cols=253 Identities=27% Similarity=0.391 Sum_probs=199.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-----chhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-----LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
++|.+.+.||+|+||.||+|.+..++. .|++|.+.... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGR-----ELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCc-----EEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence 578999999999999999999877654 49999875322 12235678899999999999999999988764
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
... ..++||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+|+||||+||+++.++.++|+|
T Consensus 77 ~~~--~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 77 MER--TLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred CCc--eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 432 458999999999999998753 5688899999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCc-ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 252 FGLARLGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 252 FGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
||+++........ .......|+..|+|||++.+..++.++|||||||++|+|++|+.||........ .....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~----- 222 (265)
T cd06652 150 FGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--IFKIA----- 222 (265)
T ss_pred CccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--HHHHh-----
Confidence 9998854321111 112335689999999999888899999999999999999999999965422211 11100
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........+...+..+.+++.+|+. +|++||++++|++
T Consensus 223 ---------~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 223 ---------TQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ---------cCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0001122344566778899999995 8999999999885
No 244
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=9.9e-40 Score=306.76 Aligned_cols=244 Identities=27% Similarity=0.478 Sum_probs=192.3
Q ss_pred ceeecccceeEEEEEEcCCCC-----cccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 103 LMIGEGGFGGVYRGVIRSTED-----SHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
+.||+|+||.||+|.+..+.. ......+++|.+...... ...+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~---- 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DE---- 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CC----
Confidence 369999999999999987652 223345788877654433 5778899999999999999999999877 33
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC-------cEEEe
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-------NAKLS 250 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~-------~~kl~ 250 (441)
.++||||+++|+|.+++... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++ .+||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 38999999999999999764 23789999999999999999999988 999999999999999887 79999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccC--CCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhh
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG--RLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~ 327 (441)
|||++..... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||..............
T Consensus 151 Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~--- 221 (259)
T cd05037 151 DPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD--- 221 (259)
T ss_pred CCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc---
Confidence 9999986433 2234567889999998876 78999999999999999999 5778865432221111110
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
.. ... ......+.+++.+||..+|.+||++.++++.|+
T Consensus 222 ----~~--------~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 ----QH--------RLP----MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ----CC--------CCC----CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 000 001167889999999999999999999998763
No 245
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.6e-40 Score=314.04 Aligned_cols=267 Identities=28% Similarity=0.396 Sum_probs=204.8
Q ss_pred cchHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEE
Q 013504 87 FTFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLI 165 (441)
Q Consensus 87 ~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 165 (441)
+.++.+....++|++.+.||+|+||.||+|.+..++. .+++|.+.... .....+.+|+.+++.+ +||||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~ 81 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGS-----KAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFY 81 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCc-----eeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeee
Confidence 3445556678899999999999999999999876654 38999876532 2235677899999999 799999999
Q ss_pred eEEeccc-cCCeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc
Q 013504 166 GYCAEDD-ERGIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242 (441)
Q Consensus 166 ~~~~~~~-~~~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~ 242 (441)
+++.... ..+...++||||+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~ 158 (286)
T cd06638 82 GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEEC
Confidence 9886432 2233569999999999999987532 245688999999999999999999998 999999999999999
Q ss_pred CCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCchh
Q 013504 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317 (441)
Q Consensus 243 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~ 317 (441)
.++.++|+|||+++...... .......|++.|+|||++.. ..++.++|||||||++|+|++|+.||.......
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~ 236 (286)
T cd06638 159 TEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR 236 (286)
T ss_pred CCCCEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH
Confidence 99999999999988654321 12234579999999998753 457889999999999999999999996543221
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
. ...... . . .+. ...+..++..+.+++.+||+.+|++||++.+|++.
T Consensus 237 ~--~~~~~~-----~-~-----~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 237 A--LFKIPR-----N-P-----PPT--LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred H--Hhhccc-----c-C-----CCc--ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1 111000 0 0 000 00111244678899999999999999999999874
No 246
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=7.9e-40 Score=317.19 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=202.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|+..+.||+|+||.||+|....++. .+|+|.+...... ..+.+..|+.++..++||||+++++++....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGK-----LFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET- 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCc-----EEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-
Confidence 368889999999999999999877554 4999998765433 3456788999999999999999999987655
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..|+||||+.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||
T Consensus 75 ---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 75 ---YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred ---EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 459999999999999999865567899999999999999999999988 99999999999999999999999999
Q ss_pred CCCCCCCCCCc---------------------------ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhC
Q 013504 254 LARLGPSDGLS---------------------------HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITG 306 (441)
Q Consensus 254 la~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG 306 (441)
++......... .......||..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 98754321100 011235789999999999988899999999999999999999
Q ss_pred CCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC----HHHHHH
Q 013504 307 RRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK----MSEVVE 378 (441)
Q Consensus 307 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 378 (441)
..||......... ... .+...........+..+.+++.+||+.+|++||+ +.+++.
T Consensus 229 ~~pf~~~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 229 TTPFKGSNRDETF--SNI--------------LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCCCCCchHHHH--HHH--------------hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 9999654432111 110 0001111111125678999999999999999999 667666
No 247
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.7e-40 Score=310.61 Aligned_cols=249 Identities=31% Similarity=0.455 Sum_probs=202.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||.|+||.||+|.+..++. .+++|.+.... ......+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 72 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQ-----VVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--- 72 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCe-----EEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC---
Confidence 368888999999999999999876654 49999987553 233456789999999999999999999988764
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++|+||+++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++
T Consensus 73 -~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 73 -KLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred -eEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 45999999999999999975 3789999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
+...... .......|++.|+|||++.+..++.++|||||||++|+|++|..||....+... ...+...
T Consensus 146 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~---~~~~~~~------- 213 (274)
T cd06609 146 GQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV---LFLIPKN------- 213 (274)
T ss_pred eeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH---HHHhhhc-------
Confidence 8754432 123346788999999999988899999999999999999999999965442211 1111100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+.+.. ..++..+.+++.+||..+|++||++++++.
T Consensus 214 ---~~~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 214 ---NPPSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ---CCCCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0011111 115667899999999999999999999987
No 248
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-40 Score=316.39 Aligned_cols=264 Identities=27% Similarity=0.443 Sum_probs=217.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh-HHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH-KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+...+.+.||+|-||.|.+|...+. ..||||.++....... ++|.+|+++|.+|+||||++++|+|..++..
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~------lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePi- 610 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGP------LKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPL- 610 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCc------eEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCch-
Confidence 4566778899999999999987662 3499999988765554 7899999999999999999999999998875
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
++|+||+++|+|.+|+.......+.-.....|+.||+.|++||.+- ++|||||.+.|+|++.++++||+|||++
T Consensus 611 ---cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 611 ---CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred ---HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 9999999999999999876444456667788999999999999987 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh--CCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT--GRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+-+......+.....+-...|||+|.+..++++.++|||+||+++||+++ ...||....... .++.....+....
T Consensus 685 R~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~ 761 (807)
T KOG1094|consen 685 RNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQG 761 (807)
T ss_pred cccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCC
Confidence 97777666666667788899999999999999999999999999999876 678986544332 2222222222222
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
... ....+.-|+..+.+++.+||..|-.+||+++++...|++.
T Consensus 762 ~~~-------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQV-------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cce-------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111 1223345788999999999999999999999999998864
No 249
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.2e-39 Score=307.12 Aligned_cols=263 Identities=25% Similarity=0.430 Sum_probs=202.0
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC-
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG- 175 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~- 175 (441)
|.+.+.||+|+||.||+|.+.... .....+|||.+..... ...+++.+|+.+++.++||||+++++++......+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSED--GSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccC--CCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 567788999999999999876432 1234599998875432 23467889999999999999999999887643322
Q ss_pred -eeEEEEEeccCCCChHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 176 -IQRLLIYEYMPNRSVQDHLTSRF----QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 176 -~~~~lv~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
...++++||+++|+|.+++.... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 12378899999999998875321 12578899999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|||+++...............+++.|++||.+....++.++|||||||++|+|++ |..||....... ...+...
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~-- 230 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE---IYNYLIK-- 230 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH---HHHHHHc--
Confidence 9999986543322222233456678999999988889999999999999999999 889986543322 1111110
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
... ...+..++..+.+++.+||..+|++||++.++++.|+++
T Consensus 231 --~~~----------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 --GNR----------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --CCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 001123456899999999999999999999999999875
No 250
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-39 Score=304.69 Aligned_cols=256 Identities=32% Similarity=0.572 Sum_probs=202.7
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
|.+.+.||.|+||.||+|.+...+. .....||+|.+...... ..+.+..|+.++..++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---- 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG-EKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEP---- 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC-CCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCe----
Confidence 4567789999999999999876542 22345999999765543 45678899999999999999999999987653
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.+++|||+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~ 152 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRD 152 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCcee
Confidence 49999999999999999764333389999999999999999999998 999999999999999999999999999986
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
........ .....+++.|+|||.+.+..++.++||||||+++++|++ |..||....... .........
T Consensus 153 ~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~~~~------- 221 (258)
T smart00219 153 LYDDDYYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE---VLEYLKKGY------- 221 (258)
T ss_pred cccccccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhcCC-------
Confidence 55432211 112347889999999988889999999999999999998 788886533221 111111100
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
....+...+..+.+++.+||..+|++||++.++++.|
T Consensus 222 -------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 -------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0011123567899999999999999999999998864
No 251
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=309.05 Aligned_cols=249 Identities=27% Similarity=0.421 Sum_probs=212.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
-|.++.+||+|+||.||++.++.++.. +|||++.-. .+.+++..|+.|+.+++.|+||++||.+.....
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v-----~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD---- 102 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHV-----LAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD---- 102 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcE-----EEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCc----
Confidence 366677899999999999999988775 999998654 356889999999999999999999997765554
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
+++|||||..|++.+.+..+ .+++.+.++..+++..+.||+|||.- .-||||||..||||+.+|..||+|||.|..
T Consensus 103 LWIVMEYCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 103 LWIVMEYCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred eEeehhhcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence 49999999999999999865 58999999999999999999999976 789999999999999999999999999987
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
+... ....+++.|||.|||||++..-.|+.++||||||++..||..|++||.+..+.- ..+-.
T Consensus 179 LTDT--MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---------------AIFMI 241 (502)
T KOG0574|consen 179 LTDT--MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR---------------AIFMI 241 (502)
T ss_pred hhhh--HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc---------------eeEec
Confidence 6543 234567899999999999999999999999999999999999999997544321 01111
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
-..|...-..+..++.++.++++.||-+.|++|-++-++++
T Consensus 242 PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 242 PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 12344445567789999999999999999999999998887
No 252
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.8e-39 Score=308.69 Aligned_cols=249 Identities=27% Similarity=0.428 Sum_probs=203.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
..|+..+.||.|+||.||+|.+..++. .||+|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQ-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--- 75 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCE-----EEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC---
Confidence 357778889999999999999876554 489998875432 33567889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 76 -~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 76 -KLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred -EEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 45999999999999999864 4688999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......++..|+|||++.+..++.++|+|||||++|||++|..||....+........
T Consensus 149 ~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~------------ 214 (277)
T cd06640 149 GQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP------------ 214 (277)
T ss_pred eeccCCc--cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhh------------
Confidence 7654322 12234568899999999988889999999999999999999999997543322111110
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..........++..+.+++.+||+.+|++||++.+++..
T Consensus 215 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 215 -----KNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -----cCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 001122344577889999999999999999999999874
No 253
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.1e-39 Score=305.03 Aligned_cols=253 Identities=25% Similarity=0.392 Sum_probs=203.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||.|+||.||++.+..++.. +++|.+..... .....+..|+.+++.++||||+++++++......
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~- 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKI-----LVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ- 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCE-----EEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC-
Confidence 478889999999999999998776543 88998865432 2345678899999999999999999988754432
Q ss_pred eeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCeEecccCCCcEEEcCCCcEE
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLH-----EGMDFQIIFRDFKSSNILLDEQWNAK 248 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~~~iiHrDlKp~NILl~~~~~~k 248 (441)
..+++|||+++++|.+++... ....+++..++.++.|++.||.||| +. +++|+||||+||+++.++.+|
T Consensus 75 -~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~k 150 (265)
T cd08217 75 -TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVK 150 (265)
T ss_pred -EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEE
Confidence 468999999999999998653 2467899999999999999999999 65 999999999999999999999
Q ss_pred EeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 249 LSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 249 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
|+|||++........ ......|++.|+|||.+.+..++.++||||||+++++|++|..||...... .....+...
T Consensus 151 l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~ 225 (265)
T cd08217 151 LGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKIKEG 225 (265)
T ss_pred EecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHHhcC
Confidence 999999987644321 123457899999999999888999999999999999999999999754421 122211110
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.....+..++..+.+++.+||..+|++||++.+|++.
T Consensus 226 --------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 --------------KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --------------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0112333566789999999999999999999999863
No 254
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=306.39 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=207.7
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhH---HHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHK---EWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
..++|...++||+|.||+|.+++.+.++.. +|+|++++....... .-+.|-++|...+||.+..|--.|+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~-----YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKL-----YAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCce-----eehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC
Confidence 347889999999999999999998887765 999999876544333 346799999999999999988778776
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+ ++|+||||+.||.|.-+|.+ ...+++.....+-.+|+.||.|||++ +||+||||.+|+|||.+|.+||+|
T Consensus 241 d----rlCFVMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 241 D----RLCFVMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred c----eEEEEEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeee
Confidence 6 45999999999999999976 46899999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
||+++.....+ ....+++|||.|+|||++....|+.++|+|.+||++|||++|+.||-.... .++...+.
T Consensus 312 FGLCKE~I~~g--~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh---~kLFeLIl----- 381 (516)
T KOG0690|consen 312 FGLCKEEIKYG--DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH---EKLFELIL----- 381 (516)
T ss_pred cccchhccccc--ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---hHHHHHHH-----
Confidence 99999755443 346789999999999999999999999999999999999999999954322 22222111
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
-. .-.++..++++...|+..+|.+||.+|.. +.||.+
T Consensus 382 --------~e--d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 382 --------ME--DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred --------hh--hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 00 12355567788999999999999999953 555554
No 255
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-41 Score=329.99 Aligned_cols=243 Identities=23% Similarity=0.406 Sum_probs=193.8
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccC----chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG----LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
.+||+|+|-+||+|.+..++.. ||.-.++... .....+|..|+.+|+.|+||||+++|.++.+.... ..
T Consensus 46 evLGrGafKtVYka~De~~giE-----VAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~--~i 118 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIE-----VAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK--TI 118 (632)
T ss_pred hhcccccceeeeeccccccchh-----hHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc--ee
Confidence 3699999999999998776654 4443333221 12347899999999999999999999999987764 45
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc-CCCcEEEeecCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD-EQWNAKLSDFGLARL 257 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla~~ 257 (441)
.+|+|++..|+|..|+.+ .+.++...+..|++||++||.|||++ .++|||||||.+||+|+ ..|.|||+|+|||..
T Consensus 119 n~iTEL~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeeecccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 789999999999999977 46788899999999999999999997 78999999999999996 458899999999987
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCch--hHHHHHHhhhhhcccccch
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPK--SEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~ 335 (441)
.... ....++|||.|||||+.. ..|+..+||||||++++||+|+..||..-... ...++...+.|. .+
T Consensus 196 ~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~-----sl 265 (632)
T KOG0584|consen 196 LRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPA-----AL 265 (632)
T ss_pred hhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHH-----Hh
Confidence 5443 234489999999999876 79999999999999999999999999543221 111222211111 11
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+ -.+++.++|.+||.. ..+||++.|+|.
T Consensus 266 ~kV------------~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 266 SKV------------KDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hcc------------CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 111 135789999999999 999999999997
No 256
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.5e-39 Score=306.97 Aligned_cols=251 Identities=29% Similarity=0.462 Sum_probs=197.4
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc------hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL------QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
+|.+.+.||+|+||.||+|.... +. .+|+|.+..... .....+.+|+.+++.++|+||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~-~~-----~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQ-GQ-----LIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEcC-CC-----eEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 47888999999999999997643 22 389998764321 1234578899999999999999999999876
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+ ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|
T Consensus 75 ~----~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 N----TISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred C----eEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 4 45999999999999999975 35788999999999999999999988 999999999999999999999999
Q ss_pred cCCCCCCCCCC----CcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 252 FGLARLGPSDG----LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 252 FGla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
||++....... .........|+..|+|||++.+..++.++|||||||++|+|++|..||................
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~- 224 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR- 224 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc-
Confidence 99987543211 1112234578999999999998889999999999999999999999996543222111100000
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...+ ..+..++..+.+++.+||..+|.+||++.+++.
T Consensus 225 ----------~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 ----------GLMP----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ----------CCCC----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0001 122245677899999999999999999999875
No 257
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.3e-39 Score=304.74 Aligned_cols=255 Identities=21% Similarity=0.385 Sum_probs=188.6
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
.||+|+||.||+|....... ...+++|.+..... ...+.+.+|+.+++.++||||+++++++..... .|+||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~----~~lv~ 74 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTG---VARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIP----YLLVF 74 (268)
T ss_pred cCCCCcCceEEEEEEEcCCC---cceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCc----cEEEE
Confidence 59999999999997654332 22356776654432 345678999999999999999999999987653 49999
Q ss_pred eccCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 183 EYMPNRSVQDHLTSRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 183 E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
||+++|+|.+++.... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.++|+|||++.....
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYK 151 (268)
T ss_pred ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCc
Confidence 9999999999997532 23567778889999999999999998 999999999999999999999999999864322
Q ss_pred CCCcceeeceecccCcCCcccccc-------CCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 261 DGLSHVSTAVVGTIGYAAPEYIQT-------GRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 261 ~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
...........|+..|+|||++.. ..++.++|||||||++|||++ |..||........... ....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~--~~~~----- 224 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNH--VIKD----- 224 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH--HHhh-----
Confidence 211122234578899999998753 245778999999999999997 5678864433211111 0100
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
......++.+. ..++..+.+++..|| .+|++||++++|++.|.
T Consensus 225 -~~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 225 -QQVKLFKPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -cccccCCCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 00111222222 224567888999999 67999999999998874
No 258
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-39 Score=310.75 Aligned_cols=257 Identities=25% Similarity=0.395 Sum_probs=203.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||++.+..++. .+|+|++..... ...+.+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 76 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGT-----VMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN--- 76 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCc-----EEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC---
Confidence 568888899999999999999876554 388888765432 23467889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.+++||||+++++|.+++.. .+.+++..+..++.+++.||.|||+. .+++||||||+||+++.++.++|+|||++
T Consensus 77 -~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 77 -NICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred -EEEEEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 45999999999999999865 45789999999999999999999963 27999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchh-----HHHHHHhhhhhcc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKS-----EQKLLEWVRPHLT 330 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~-----~~~~~~~~~~~~~ 330 (441)
...... ......|+..|+|||++.+..++.++|||||||++|+|++|..||....... .............
T Consensus 152 ~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd06620 152 GELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ 227 (284)
T ss_pred cchhhh----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh
Confidence 754222 1234578999999999988899999999999999999999999997544321 1111111111110
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
.. .+. .....++..+.+++.+||..||.+||++.++++..
T Consensus 228 ~~-------~~~---~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 228 EP-------PPR---LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred cc-------CCC---CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00 011 11123667899999999999999999999999863
No 259
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=329.08 Aligned_cols=252 Identities=23% Similarity=0.427 Sum_probs=207.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+-|.++..||.|+||.||+|+.+.++-. .|.|++..........++-|+.||..+.||+||+|++.|+..+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~l-----AAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enk--- 103 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLL-----AAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK--- 103 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhh-----hhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc---
Confidence 4577888899999999999998866543 56677777666677889999999999999999999998776664
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
++|+.|||.||.+...+... +..+.+.++..+++|++.||.|||++ +|||||||..|||++-+|.++|+|||.+.
T Consensus 104 -LwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 104 -LWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred -eEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccc
Confidence 48999999999998887654 67899999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
..... .....++.|||+|||||+.. ..+|+.++||||||++|.||..+.+|....++. .++-.+... +
T Consensus 179 Kn~~t--~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---RVllKiaKS--e 251 (1187)
T KOG0579|consen 179 KNKST--RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKS--E 251 (1187)
T ss_pred cchhH--HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH---HHHHHHhhc--C
Confidence 54332 23456799999999999764 468999999999999999999999998654432 222111110 0
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.| .--.+..++..+.+++.+||.+||..||++.++++
T Consensus 252 --------PP--TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 252 --------PP--TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred --------CC--cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 01 11234567888999999999999999999999987
No 260
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.9e-39 Score=310.81 Aligned_cols=266 Identities=29% Similarity=0.387 Sum_probs=205.7
Q ss_pred cchHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEE
Q 013504 87 FTFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLI 165 (441)
Q Consensus 87 ~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 165 (441)
+.++++...+++|.+.+.||+|+||.||+|....++. .+|+|.+.... .....+.+|+.++.++ +||||++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~-----~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~ 85 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGS-----LAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFY 85 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCC-----EEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 4445555667899999999999999999999876654 38999886532 2235677899999998 899999999
Q ss_pred eEEecccc-CCeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc
Q 013504 166 GYCAEDDE-RGIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242 (441)
Q Consensus 166 ~~~~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~ 242 (441)
+++...+. .+...++||||+++++|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+||+++
T Consensus 86 ~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~ 162 (291)
T cd06639 86 GMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLT 162 (291)
T ss_pred EEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEc
Confidence 99876442 223569999999999999988632 245789999999999999999999988 999999999999999
Q ss_pred CCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccC-----CCCccccchhHHHHHHHHHhCCCCCCCCCchh
Q 013504 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-----RLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317 (441)
Q Consensus 243 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltG~~P~~~~~~~~ 317 (441)
.++.+||+|||++........ ......|+..|+|||.+... .++.++|||||||++|+|++|+.||.......
T Consensus 163 ~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~ 240 (291)
T cd06639 163 TEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK 240 (291)
T ss_pred CCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence 999999999999886543221 12345789999999987643 36889999999999999999999997543221
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. +........ +. ...+......+.+++.+||..+|++||++.++++
T Consensus 241 ~--~~~~~~~~~-----------~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 241 T--LFKIPRNPP-----------PT--LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred H--HHHHhcCCC-----------CC--CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 111110000 00 0112234567999999999999999999999986
No 261
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-39 Score=310.84 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=199.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||+|.+..++. .+|+|.+.... ......+.+|+.++.+++||||+++++++...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGV-----TMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG--- 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCc-----EEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC---
Confidence 368888999999999999999876654 38999886542 223467889999999999999999999887755
Q ss_pred eeEEEEEeccCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF-QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|..++.... ...+++..+..++.|++.||.|||++ .+|+||||||+||+++.++.++|+|||+
T Consensus 73 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 149 (286)
T cd06622 73 -AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGV 149 (286)
T ss_pred -eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCC
Confidence 4599999999999999886521 24789999999999999999999963 2899999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCC------CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR------LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
+...... ......|++.|+|||++.+.. ++.++|||||||++|+|++|..||...............
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~--- 222 (286)
T cd06622 150 SGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI--- 222 (286)
T ss_pred cccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH---
Confidence 8764322 123356888999999985543 478999999999999999999999654322211111111
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+. .....+..++..+.+++.+||..+|++||++.+++.
T Consensus 223 ----------~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 223 ----------VDG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ----------hhc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 000 011223346788999999999999999999999987
No 262
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.7e-39 Score=313.37 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=201.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||++.+..++. .|++|.+..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQ-----RFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR- 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCc-----EEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-
Confidence 468899999999999999999877654 399998875432 22356778999999999999999999987655
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||++|++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||
T Consensus 75 ---~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 75 ---HLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred ---EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 35999999999999999976 35789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCC-------------cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH
Q 013504 254 LARLGPSDGL-------------SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK 320 (441)
Q Consensus 254 la~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~ 320 (441)
+++....... ........|+..|+|||.+.+..++.++|||||||++|||++|..||.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~--- 223 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE--- 223 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---
Confidence 9874211100 001123467889999999988889999999999999999999999996543221
Q ss_pred HHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 321 LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
........ . ...+. ....++..+.+++.+||+.+|++||++.++++.|+.
T Consensus 224 ~~~~~~~~---~-----~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 224 LFGQVISD---D-----IEWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHhc---c-----cCCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11111000 0 00010 111356778999999999999999998777666654
No 263
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.3e-40 Score=314.49 Aligned_cols=250 Identities=27% Similarity=0.403 Sum_probs=199.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
.|.....||+|+||.||++....++. .||||.+........+.+.+|+.+++.++||||+++++.+...+ .
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~----~ 93 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGK-----QVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD----E 93 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCC-----EEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC----e
Confidence 34444569999999999998766554 39999987655555667889999999999999999999987665 3
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++||||+++++|.+++.. ..+++..+..++.||+.||.|||++ +|+||||||+||+++.++.++|+|||++..
T Consensus 94 ~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 94 LWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 5999999999999998854 4688999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
..... .......|+..|+|||.+.+..++.++||||||+++|||++|..||...........+ ...
T Consensus 168 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~--------- 233 (292)
T cd06658 168 VSKEV--PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI---RDN--------- 233 (292)
T ss_pred ccccc--ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hhc---------
Confidence 43321 1223467899999999998888999999999999999999999999754432211111 110
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..+.+. .....+..+.+++.+||..||.+||+++++++.
T Consensus 234 -~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 234 -LPPRVK--DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -CCCccc--cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111111 111345678899999999999999999999973
No 264
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.2e-39 Score=304.12 Aligned_cols=250 Identities=25% Similarity=0.404 Sum_probs=202.4
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|+||.||++....++. .+++|.+.... ....+++.+|+.+++.++||||+++++++...+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGK-----QYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG--- 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCC-----EEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC---
Confidence 48889999999999999999876554 49999886432 233457889999999999999999999987665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||+|+|||++.++.++|+|||++
T Consensus 73 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 73 -NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred -eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 459999999999999999765455789999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......|++.|+|||++.+..++.++|+|||||++++|++|..||......... .......
T Consensus 149 ~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~--~~~~~~~------- 217 (256)
T cd08218 149 RVLNSTV--ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLV--LKIIRGS------- 217 (256)
T ss_pred eecCcch--hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHH--HHHhcCC-------
Confidence 8654322 1123456889999999999888999999999999999999999999654322111 1111000
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
....+..++..+.+++.+||+.+|.+||++.+|++
T Consensus 218 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 218 --------YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --------CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 01122345678999999999999999999999986
No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.3e-40 Score=311.82 Aligned_cols=248 Identities=28% Similarity=0.448 Sum_probs=199.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.|+..+.||+|+||.||+|.+..++. .||+|.+..... ...+.+.+|+.+++.++||||+++++++....
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 75 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKE-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT---- 75 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCe-----EEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC----
Confidence 46667789999999999999866543 489998875432 23456889999999999999999999987655
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 76 KLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred ceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 35999999999999999864 5789999999999999999999988 99999999999999999999999999997
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...... .......|+..|+|||++.+..++.++|||||||++|||++|..||....+... ......
T Consensus 150 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~~~~~--------- 215 (277)
T cd06642 150 QLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---LFLIPK--------- 215 (277)
T ss_pred cccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---Hhhhhc---------
Confidence 654321 122335688999999999988999999999999999999999999864332211 111100
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.........++..+.+++.+||..+|++||++.+++..
T Consensus 216 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 216 -----NSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -----CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00111223456778999999999999999999999983
No 266
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.5e-39 Score=303.45 Aligned_cols=249 Identities=25% Similarity=0.405 Sum_probs=201.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|+..+.||+|+||.||++....++. .+++|.+..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQK-----LVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK--- 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCc-----EEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC---
Confidence 58888999999999999999876554 489998865432 23467889999999999999999999887655
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-CcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-WNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DFGl 254 (441)
..++||||+++++|.+++.......+++..+..++.|++.||.|||++ +|+|+||||+||+++.+ +.++|+|||+
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 73 -ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred -EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 359999999999999999876556789999999999999999999998 99999999999999855 4589999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||........ ........
T Consensus 149 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~----- 217 (256)
T cd08220 149 SKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL---VLKIMSGT----- 217 (256)
T ss_pred ceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH---HHHHHhcC-----
Confidence 98654332 22345789999999999988899999999999999999999999975443221 11110000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
....+..++..+.+++.+||..+|.+||++.+++.
T Consensus 218 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 218 ---------FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00112235677899999999999999999999986
No 267
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3e-39 Score=305.92 Aligned_cols=258 Identities=31% Similarity=0.427 Sum_probs=203.8
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
.+++|++.+.||+|+||.||+|.+..++. .+++|.+..... ....+.+|+.+++++ .||||+++++++.....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQ-----LVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP 77 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCc-----EEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence 45789999999999999999999876544 389998875543 346788999999998 79999999999977552
Q ss_pred --CCeeEEEEEeccCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 174 --RGIQRLLIYEYMPNRSVQDHLTSRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 174 --~~~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
.+...++||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|
T Consensus 78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l 154 (275)
T cd06608 78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKL 154 (275)
T ss_pred CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEE
Confidence 2345699999999999999986533 46789999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~ 324 (441)
+|||++....... .......|+..|+|||++.. ..++.++|||||||++|+|++|..||........ ....
T Consensus 155 ~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~ 230 (275)
T cd06608 155 VDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--LFKI 230 (275)
T ss_pred CCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--HHHh
Confidence 9999987643321 12334678999999998754 3467889999999999999999999964332211 1111
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. ........+..++..+.+++.+||..||++||++.++++
T Consensus 231 ~~-------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PR-------------NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hc-------------cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 10 000011122346678999999999999999999999986
No 268
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.4e-39 Score=310.72 Aligned_cols=267 Identities=25% Similarity=0.361 Sum_probs=202.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|.+..++. .|++|.+..... ...+.+.+|+.+++.++|+||+++++++...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~-----~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGE-----IVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-- 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCc-----EEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC--
Confidence 368899999999999999999877654 499998865432 23467889999999999999999999998755
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||++++.+..++.. ...+++..+..++.||+.||.|||++ +++|+||+|+||++++++.+||+|||+
T Consensus 74 --~~~iv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 74 --RLYLVFEYVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred --EEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 45999999998777665544 35689999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc--
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD-- 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-- 331 (441)
+........ .......++..|+|||++.+. .++.++||||||+++|+|++|..||..................+..
T Consensus 147 ~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (288)
T cd07833 147 ARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSH 225 (288)
T ss_pred ccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 987554332 123346788999999999888 7899999999999999999999999754432221111111000000
Q ss_pred ------ccchhh--hcCCC----CCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 ------AKKFTM--ILDPK----LEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ------~~~~~~--~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...... ..+.. ....++..++..+.+++.+||..+|++||++++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 226 QELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred hhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000 00000 000112234778999999999999999999999875
No 269
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3e-39 Score=313.11 Aligned_cols=200 Identities=27% Similarity=0.436 Sum_probs=160.5
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
..||+|+||.||+|....... ...||+|.+..... ...+.+|+.+++.++||||+++++++...... ..++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~---~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKD---EKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDR--KVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCc---cceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCC--eEEEEE
Confidence 579999999999999764322 23599998865432 34577899999999999999999998754433 468999
Q ss_pred eccCCCChHHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE----cCCCcEEEee
Q 013504 183 EYMPNRSVQDHLTSR-------FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL----DEQWNAKLSD 251 (441)
Q Consensus 183 E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl----~~~~~~kl~D 251 (441)
||++ ++|.+++... ....+++..+..++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 80 DYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred eeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 9985 5788877421 123588899999999999999999998 99999999999999 5667899999
Q ss_pred cCCCCCCCCCCCc-ceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCC
Q 013504 252 FGLARLGPSDGLS-HVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRN 313 (441)
Q Consensus 252 FGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~ 313 (441)
||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+||.+||...
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 9999865432211 12234678999999999876 45789999999999999999999999643
No 270
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3e-39 Score=304.75 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=204.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||.|+||+||+|....++. .+++|++..... .....+.+|+.+++.++|+||+++++.+....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNE-----KVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD--- 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCc-----EEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC---
Confidence 478999999999999999999776544 489999875432 24567889999999999999999999887655
Q ss_pred eeEEEEEeccCCCChHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQ-ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 73 -~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~ 148 (267)
T cd06610 73 -ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGV 148 (267)
T ss_pred -EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccch
Confidence 45999999999999999976432 5789999999999999999999988 999999999999999999999999999
Q ss_pred CCCCCCCCCc--ceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 255 ARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 255 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
+......... .......|+..|+|||++... .++.++|+|||||++|+|++|+.||........ ....... .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~---~ 223 (267)
T cd06610 149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LMLTLQN---D 223 (267)
T ss_pred HHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHHHhcC---C
Confidence 8765443222 123445789999999998776 789999999999999999999999965433211 1111110 0
Q ss_pred ccchhhhcCCCCCCc-chHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKFTMILDPKLEGK-YSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+.+... ....++..+.+++.+||..||++||++.+++.
T Consensus 224 --------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 --------PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --------CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0111111 11256678899999999999999999999886
No 271
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=322.13 Aligned_cols=256 Identities=27% Similarity=0.461 Sum_probs=215.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
+..+..+||-|-||.||.|+|+.-.- .||||.++... ...++|+.|..+|+.++|||+|+|+|+|.....
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkysl-----TvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP---- 337 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP---- 337 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccce-----eeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC----
Confidence 44556689999999999999986543 39999997654 446899999999999999999999999987664
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
+|||+|||..|+|.+||.+.....++.-..+.++.||..|+.||..+ ++|||||...|+|+.++..||++|||++++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhh
Confidence 49999999999999999987777888888999999999999999998 999999999999999999999999999998
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...+.... .....-.+-|.|||-+....++.++|||+|||+|||+.| |..||.+........+++
T Consensus 415 MtgDTYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE------------- 480 (1157)
T KOG4278|consen 415 MTGDTYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE------------- 480 (1157)
T ss_pred hcCCceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh-------------
Confidence 76554322 122334567999999999999999999999999999998 899997654333322222
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
...+-..+..|++.+.+|++.||+.+|.+||++.|+-+.++.++
T Consensus 481 ----kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 481 ----KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ----ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 22333445678999999999999999999999999999998877
No 272
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.6e-39 Score=305.57 Aligned_cols=255 Identities=25% Similarity=0.440 Sum_probs=198.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch----------hhHHHHHHHHHhccCCCCCeeeEEeE
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ----------GHKEWVTEVNVLGVVEHPNLVKLIGY 167 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~E~~il~~l~hpnIv~l~~~ 167 (441)
+|...+.||.|+||.||+|....++. .+|+|.+...... ..+.+..|+.+++.++||||++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 76 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGE-----MMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF 76 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCc-----eeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 47778899999999999999776554 3899987532110 12457789999999999999999999
Q ss_pred EeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcE
Q 013504 168 CAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247 (441)
Q Consensus 168 ~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~ 247 (441)
+...+ ..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+
T Consensus 77 ~~~~~----~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 77 ETTEE----YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred eccCC----ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 87655 349999999999999999763 6789999999999999999999998 99999999999999999999
Q ss_pred EEeecCCCCCCCCCCCcceeeceecccCcCCccccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR--LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 248 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
+|+|||+++...............|+..|+|||.+.... ++.++||||||+++|++++|..||....... ......
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~ 225 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA--AMFKLG 225 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH--HHHHhh
Confidence 999999998644322122233457899999999987654 7899999999999999999999996432211 111100
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ....+.+.......++..+.+++.+||..+|.+||++.+|++
T Consensus 226 ~----------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 226 N----------KRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred c----------cccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 0 000111111222345678999999999999999999999886
No 273
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.4e-39 Score=304.80 Aligned_cols=254 Identities=26% Similarity=0.447 Sum_probs=201.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc------hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL------QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
+|+..+.||+|+||.||+|....++. .+|+|.+..... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGT-----LMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCc-----EEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC
Confidence 47888999999999999998766654 399998865331 1246788999999999999999999999876
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC-cEEEe
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-NAKLS 250 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~-~~kl~ 250 (441)
+. .++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++ .++|+
T Consensus 76 ~~----~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SH----FNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred Ce----EEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 53 4999999999999999975 35789999999999999999999998 999999999999998776 59999
Q ss_pred ecCCCCCCCCCCCc--ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 251 DFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 251 DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
|||++......... .......||..|+|||.+.+..++.++||||||+++++|++|..||.................
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~- 225 (268)
T cd06630 147 DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS- 225 (268)
T ss_pred ccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-
Confidence 99998865443211 112345789999999999888899999999999999999999999964433222221111100
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.......+...+..+.+++.+||..+|.+||++.+++.
T Consensus 226 ------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 226 ------------ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ------------cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00112233456788999999999999999999999985
No 274
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.8e-39 Score=308.39 Aligned_cols=266 Identities=25% Similarity=0.355 Sum_probs=200.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|+....||+|+||.||+|.+..++. .||+|.+..... ...+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-- 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQ-----IVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-- 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCc-----EEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC--
Confidence 468889999999999999999876654 389998765432 22355778999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|..++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 74 --~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 74 --KLHLVFEYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred --EEEEEEeccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 35999999999888887754 35689999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHH-hhhhhccc-
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE-WVRPHLTD- 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~-~~~~~~~~- 331 (441)
+........ ......++..|+|||++.+ ..++.++||||||+++|+|++|..||...........+. ........
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07847 147 ARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRH 224 (286)
T ss_pred ceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence 986544321 1233567889999999876 457889999999999999999999997655433222111 11000000
Q ss_pred ------ccchhhhcCCCCCCc-----chHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 ------AKKFTMILDPKLEGK-----YSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ------~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.........+..... .....+..+.+++.+||+.+|++||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 225 QQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred hhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000110000 01134677899999999999999999999875
No 275
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-39 Score=313.40 Aligned_cols=250 Identities=26% Similarity=0.387 Sum_probs=199.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
.|.....||+|+||.||+|....++. .|++|.+........+.+.+|+.++..++||||+++++++...+ .
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~----~ 92 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGR-----QVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE----E 92 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCC-----EEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC----e
Confidence 34455579999999999998765544 49999987655455567889999999999999999999987755 3
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++||||+++++|..++.. ..+++..++.++.|++.||.|||++ +|+||||||+||+++.++.++|+|||++..
T Consensus 93 ~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~ 166 (297)
T cd06659 93 LWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQ 166 (297)
T ss_pred EEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhh
Confidence 5999999999999998754 4689999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||........... ......
T Consensus 167 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~------- 234 (297)
T cd06659 167 ISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR---LRDSPP------- 234 (297)
T ss_pred ccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HhccCC-------
Confidence 43321 122346789999999999988999999999999999999999999975443222111 111000
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
+ ........+..+.+++.+||+.+|.+||++.++++.
T Consensus 235 ---~--~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 235 ---P--KLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---C--CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 001112345678899999999999999999999984
No 276
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.6e-39 Score=305.73 Aligned_cols=260 Identities=26% Similarity=0.362 Sum_probs=203.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|...+.||.|++|.||+|.+..++. .+|+|.+..... .....+.+|++++++++||||+++++++......
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~- 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGM-----IFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSS- 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCe-----EEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCC-
Confidence 368888999999999999999876543 499998875433 3346788999999999999999999998765432
Q ss_pred eeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||
T Consensus 75 -~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg 150 (287)
T cd06621 75 -SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG 150 (287)
T ss_pred -eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecc
Confidence 469999999999999987532 245688999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCc--hhHHHHHHhhhhhccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP--KSEQKLLEWVRPHLTD 331 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~--~~~~~~~~~~~~~~~~ 331 (441)
++....... .....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ....+...+......
T Consensus 151 ~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~- 225 (287)
T cd06621 151 VSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN- 225 (287)
T ss_pred ccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc-
Confidence 987543321 1235678899999999989999999999999999999999999975522 112222232221000
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. +.... ......+..+.+++.+||..+|.+||++.++++
T Consensus 226 ----~~-~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 226 ----PE-LKDEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ----hh-hccCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00 00000 011235678899999999999999999999998
No 277
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.3e-39 Score=309.12 Aligned_cols=245 Identities=25% Similarity=0.432 Sum_probs=199.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||++.+..++. .+|+|.+..... .....+.+|+.++++++||||+++++++....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGK-----YYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS- 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-
Confidence 468899999999999999999876554 499998865432 23456788999999999999999999997765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+|+||+|+|||++.++.+||+|||
T Consensus 75 ---~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 75 ---NLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred ---eEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 359999999999999999763 6789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++..... .....|++.|+|||.+.+..++.++||||||+++|+|++|..||....... ...... ..
T Consensus 147 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~---~~-- 213 (290)
T cd05580 147 FAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ---IYEKIL---EG-- 213 (290)
T ss_pred CccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHh---cC--
Confidence 99865433 234578999999999988888999999999999999999999997544221 111110 00
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
....+..++..+.+++.+||..+|.+|+ ++++++.
T Consensus 214 ----------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 214 ----------KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ----------CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0012223467889999999999999998 6666654
No 278
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.1e-39 Score=302.31 Aligned_cols=251 Identities=27% Similarity=0.521 Sum_probs=198.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|.+.+.||.|+||.||+|.+.... .+++|.+..... ....+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~------~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~--- 73 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKR------KVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSP--- 73 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCC------eEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCc---
Confidence 46888899999999999999875322 389998865432 34578899999999999999999999876653
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++||||+++++|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.++|+|||+++
T Consensus 74 -~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 74 -ICLVFEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred -eEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 49999999999999998753 34688999999999999999999988 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
....... .......++..|+|||++.++.++.++||||||+++|||++ |..||....... ........ .
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~----~-- 218 (256)
T cd05112 149 FVLDDQY-TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVETINAG----F-- 218 (256)
T ss_pred ecccCcc-cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHhCC----C--
Confidence 5433211 11122345678999999988899999999999999999998 999996543221 12111100 0
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
....+ ...+..+.+++.+||+.+|++||++.++++.|
T Consensus 219 -~~~~~-------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 219 -RLYKP-------RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -CCCCC-------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 00111 11346799999999999999999999999887
No 279
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=296.37 Aligned_cols=258 Identities=23% Similarity=0.306 Sum_probs=209.0
Q ss_pred HhcCCccc-ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 95 ATKNFSRS-LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 95 ~~~~f~~~-~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
.+++|++. ++||-|-.|.|-.+.++.+++. +|+|++... ....+|+++.-.. .|||||.+++++...-
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ek-----fALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~ 128 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEK-----FALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSY 128 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhh-----hHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence 45677764 5799999999999999998876 999998543 4566899886655 7999999999998766
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc---CCCcEEE
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD---EQWNAKL 249 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~---~~~~~kl 249 (441)
.....+++|||.++||.|...+.++....+++.++..|+.||+.|+.|||+. +|.||||||+|+|.. .|..+||
T Consensus 129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 5555678999999999999999998888999999999999999999999987 999999999999995 4556999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPH 328 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~ 328 (441)
+|||+|+.... .....+.+.||.|.|||++....|+..+|+||+||++|-||+|.+||-.+...... ..-..++.
T Consensus 206 tDfGFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~- 281 (400)
T KOG0604|consen 206 TDFGFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT- 281 (400)
T ss_pred cccccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc-
Confidence 99999996543 22345678999999999999999999999999999999999999999544321100 00000000
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
-.-.+.......+++...++|+.+|..+|.+|.++.++++.
T Consensus 282 ----------gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 282 ----------GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ----------cCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 00112233445788899999999999999999999999883
No 280
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7e-39 Score=301.68 Aligned_cols=252 Identities=28% Similarity=0.451 Sum_probs=207.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|++|.||+|.+..++. .+++|.+..... .....+.+|+.++.+++||||+++++++....
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~-----~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGK-----IYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG--- 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCc-----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC---
Confidence 368889999999999999999887654 399999876654 34567889999999999999999999998765
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHE-GMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|.+++... ..+++..++.++.|++.||.|||+ . +++||||+|+||+++.++.++|+|||+
T Consensus 73 -~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 73 -EISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred -eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 459999999999999999763 678999999999999999999998 7 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+........ ......++..|+|||.+.+..++.++||||||+++|+|++|..||..................
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~------ 218 (264)
T cd06623 147 SKVLENTLD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG------ 218 (264)
T ss_pred ceecccCCC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC------
Confidence 986543321 123457899999999999888999999999999999999999999765432222333222110
Q ss_pred hhhhcCCCCCCcchHH-HHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIK-LAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ....+.. ++..+.+++.+||..+|++||++.++++
T Consensus 219 -------~-~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 219 -------P-PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred -------C-CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0 0111223 5678999999999999999999999998
No 281
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-39 Score=311.08 Aligned_cols=266 Identities=26% Similarity=0.367 Sum_probs=199.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|.+..++. .+|+|.+...... ..+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQ-----IVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK-- 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCC-----EEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC--
Confidence 468899999999999999999876554 4999987654322 2356778999999999999999999997655
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|.++... ...+++..++.++.||+.||.|||+. +|+|+||+|+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 74 --RLYLVFEFVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred --eEEEEEecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 45999999999999887754 34689999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc-
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA- 332 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~- 332 (441)
+....... .......++..|+|||++.+ ..++.++||||||+++|||++|..||...........+......+...
T Consensus 147 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07846 147 ARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRH 224 (286)
T ss_pred eeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhh
Confidence 88654332 12234568899999998865 347789999999999999999999997544322111111100000000
Q ss_pred -------cchhhhcCCCCCC-----cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 -------KKFTMILDPKLEG-----KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 -------~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........+.... .....++..+.+++.+||..+|++||++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 225 QEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000000010000 011245678999999999999999999999885
No 282
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.9e-39 Score=301.73 Aligned_cols=248 Identities=28% Similarity=0.453 Sum_probs=199.0
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-----hhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-----QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
+|+..+.||+|+||.||+|....++. .|++|.+..... ...+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGD-----FFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCc-----EEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC
Confidence 46777899999999999999875544 389998765432 23467889999999999999999999987665
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+|+||+|+||+++.++.+||+||
T Consensus 76 ----~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 ----NLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred ----eEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 35999999999999999976 35689999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
|++....... ......|+..|++||.+.... ++.++|+||||+++|+|++|..||....... ....... . .
T Consensus 147 ~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~-~-~- 218 (258)
T cd06632 147 GMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA--AVFKIGR-S-K- 218 (258)
T ss_pred ccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH--HHHHHHh-c-c-
Confidence 9988654332 234467899999999987766 8999999999999999999999996544211 1111110 0 0
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ....+..++..+.+++.+||..+|.+||++.+++.
T Consensus 219 --~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 219 --E---------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --c---------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 01122245677889999999999999999999985
No 283
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-39 Score=332.45 Aligned_cols=276 Identities=19% Similarity=0.285 Sum_probs=190.9
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccc--------------eeEEEEEccccCchhhHHHHHHHHHhccCCC
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKK--------------IDIAVKQLSRRGLQGHKEWVTEVNVLGVVEH 158 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~--------------~~vavK~~~~~~~~~~~~~~~E~~il~~l~h 158 (441)
....++|++++.||+|+||+||+|.++........ ..++.|.+.. .......+.+|+.+|++++|
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~H 222 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNH 222 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCC
Confidence 34567899999999999999999876543221100 0011111111 11223567899999999999
Q ss_pred CCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccC
Q 013504 159 PNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF---QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK 235 (441)
Q Consensus 159 pnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlK 235 (441)
|||+++++++...+. .|+|+|++ +++|.+++.... ........+..|+.||+.||.|||++ +|+|||||
T Consensus 223 pnIv~l~~~~~~~~~----~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLK 294 (501)
T PHA03210 223 ENILKIEEILRSEAN----TYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIK 294 (501)
T ss_pred CCcCcEeEEEEECCe----eEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 999999999987664 48999998 567888775321 12234567788999999999999998 99999999
Q ss_pred CCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCC-CCCCCC
Q 013504 236 SSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRR-PLDRNR 314 (441)
Q Consensus 236 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~-P~~~~~ 314 (441)
|+||||+.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|.. |+....
T Consensus 295 P~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~ 373 (501)
T PHA03210 295 LENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG 373 (501)
T ss_pred HHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC
Confidence 9999999999999999999986543221 12334689999999999999999999999999999999999875 454433
Q ss_pred chhHHHHHHhhhhhccccc-------chhhhcCCC-C---CCcc-----hHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 315 PKSEQKLLEWVRPHLTDAK-------KFTMILDPK-L---EGKY-----SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~---~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
......+...+........ .....++.. + .... ....+..+.+++.+||..||.+||++.|++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 374 GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 3322222221111000000 000000000 0 0000 0113456788899999999999999999987
No 284
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.4e-39 Score=304.48 Aligned_cols=255 Identities=25% Similarity=0.428 Sum_probs=199.0
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC----------chhhHHHHHHHHHhcc-CCCCCeeeEEe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG----------LQGHKEWVTEVNVLGV-VEHPNLVKLIG 166 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~il~~-l~hpnIv~l~~ 166 (441)
+|++.+.||+|+||.||+|.+..+.. ..+|+|.+.... .....++.+|+.++.+ ++||||+++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~----~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQ----NLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCC----ceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 47788899999999999999876221 248888875322 1223456788888875 79999999999
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
++...+ ..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+. .+++|+||||+|||++.+
T Consensus 77 ~~~~~~----~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 77 TFLEND----RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGED 150 (269)
T ss_pred eEccCC----eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCC
Confidence 998765 35999999999999998853 2245789999999999999999999963 289999999999999999
Q ss_pred CcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHh
Q 013504 245 WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~ 324 (441)
+.++|+|||++....... ......|+..|+|||.+.+..++.++||||||+++|+|++|..||...........+.
T Consensus 151 ~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~- 226 (269)
T cd08528 151 DKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV- 226 (269)
T ss_pred CcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHh-
Confidence 999999999998654332 2345678999999999998889999999999999999999999996543222111110
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
. ..........++..+.+++.+||+.||++||++.++..++.
T Consensus 227 --~-------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 --E-------------AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --h-------------ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 0 00000011134567899999999999999999999998875
No 285
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.5e-38 Score=303.34 Aligned_cols=266 Identities=24% Similarity=0.374 Sum_probs=200.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||.|+||.||+|.+..++. .|++|.+..... .....+.+|+.++++++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGE-----TVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS--- 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCc-----eEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC---
Confidence 47888999999999999999876654 389999876542 23467889999999999999999999998754
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+ +++|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++
T Consensus 73 -~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 73 -GFVLVMEYM-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred -eeEEEeccc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 459999999 99999998754 36799999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhh-------
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVR------- 326 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~------- 326 (441)
........ .......|+..|+|||++.+. .++.++|||||||++++|++|.+||........... .....
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (286)
T cd07832 147 RLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETW 225 (286)
T ss_pred ccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHH
Confidence 86544321 122345789999999988654 468899999999999999999888865443221111 11100
Q ss_pred hhcccccchhhhcCCCCC----CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 327 PHLTDAKKFTMILDPKLE----GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.............+... .....+.+..+.+++.+||..+|++||++++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 226 PGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000000000000 0011134578999999999999999999999986
No 286
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-38 Score=313.46 Aligned_cols=276 Identities=24% Similarity=0.286 Sum_probs=205.1
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|+..+.||+|+||.||+|.+..++.. ||+|.+.... ......+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQN-----VAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQ 87 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCE-----EEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccC
Confidence 3457899999999999999999998776553 9999986532 22345677899999999999999999998754
Q ss_pred cc--CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 172 DE--RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 172 ~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
.. .....|+||||+. ++|.+.+.. .++...+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 88 ~~~~~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL 159 (353)
T cd07850 88 KSLEEFQDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKI 159 (353)
T ss_pred CCccccCcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEE
Confidence 32 1124599999995 588888854 288899999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhh-
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRP- 327 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~- 327 (441)
+|||+++...... ......+|..|+|||++.+..++.++|||||||++|+|++|+.||......... ........
T Consensus 160 ~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 236 (353)
T cd07850 160 LDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTP 236 (353)
T ss_pred ccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999998654321 123456899999999999999999999999999999999999999654322111 11110000
Q ss_pred --------------hcccc-----cchhhhcCC----CCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHH
Q 013504 328 --------------HLTDA-----KKFTMILDP----KLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNK 382 (441)
Q Consensus 328 --------------~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 382 (441)
..... ..+...... ..........+..+.+++.+||+.||++||++.+++. +|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 237 SDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred CHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence 00000 000000000 0000112234667889999999999999999999997 4554
Q ss_pred HHh
Q 013504 383 IVD 385 (441)
Q Consensus 383 ~~~ 385 (441)
...
T Consensus 317 ~~~ 319 (353)
T cd07850 317 WYD 319 (353)
T ss_pred ccC
Confidence 443
No 287
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-40 Score=323.17 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=210.0
Q ss_pred cccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 100 SRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 100 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
...++||+|.||.|++|.|.... .+.+.||||.+...... ....|++|+.+|.+|+|||+++|||+..+.. .
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~ps--gk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp-----~ 185 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPS--GKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQP-----A 185 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCC--CcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccch-----h
Confidence 34457999999999999998743 45678999999876544 5688999999999999999999999998733 3
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
.+|||+++.|+|.+.|..-....|.....-.++.||+.|+.||.++ ++|||||...|+||-..-.|||+||||.+-+
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceecc
Confidence 7999999999999999875567888899999999999999999998 9999999999999999989999999999977
Q ss_pred CCCCCcce-eeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 259 PSDGLSHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 259 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...+.... .....-...|+|||.+....++.++|||+|||++|||+| |+.||-+-......+.+
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i-------------- 328 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI-------------- 328 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc--------------
Confidence 65443322 223344567999999999999999999999999999999 78999765543333222
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
|....-.-+..|++++.++++.||..+|++||++..|.+.
T Consensus 329 ---D~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 329 ---DAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ---cccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 2222223445789999999999999999999999999853
No 288
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=9.1e-39 Score=305.35 Aligned_cols=249 Identities=27% Similarity=0.425 Sum_probs=199.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
.|...+.||+|++|.||++....++. .+++|.+........+.+.+|+.+++.++||||+++++++...+ .
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~----~ 90 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGR-----QVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD----E 90 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCC-----EEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC----e
Confidence 45556789999999999999776554 38999886555445567889999999999999999999987655 3
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++|+||+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||++..
T Consensus 91 ~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 91 LWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 5999999999999999876 4689999999999999999999998 999999999999999999999999998875
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
..... .......|++.|+|||.+.+..++.++|||||||++|+|++|..||....+...... .....
T Consensus 165 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~---~~~~~-------- 231 (285)
T cd06648 165 VSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNL-------- 231 (285)
T ss_pred hccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH---HHhcC--------
Confidence 43321 122345789999999999888899999999999999999999999965443222111 11110
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+... ....++..+.+++.+||..+|++||++.++++
T Consensus 232 --~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 232 --PPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --CCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 00000 11125567999999999999999999999986
No 289
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.2e-39 Score=307.92 Aligned_cols=263 Identities=24% Similarity=0.340 Sum_probs=195.2
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|+||.||+|.+..++. .+++|.+...... ....+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~-----~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK--- 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCc-----EEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC---
Confidence 47888999999999999999877665 3899988653221 2345778999999999999999999987665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++|+||++ ++|.+++... ...+++..++.++.||+.||.|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 73 -~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 73 -KLTLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred -ceEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 3599999996 5888887653 35799999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc--c
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD--A 332 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~--~ 332 (441)
+...... .......+++.|+|||++.+. .++.++|||||||++|+|++|..|+......... ...+...... .
T Consensus 147 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~ 222 (284)
T cd07839 147 RAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ--LKRIFRLLGTPTE 222 (284)
T ss_pred hccCCCC--CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH--HHHHHHHhCCCCh
Confidence 8543321 112335678999999988764 4789999999999999999999886433322111 1111000000 0
Q ss_pred cc---hhhhcC----CCCC-----CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 KK---FTMILD----PKLE-----GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 ~~---~~~~~~----~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. .....+ +... ......++..+.+++.+||+.||.+|||+++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 223 ESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 000000 0000 0111235678899999999999999999999875
No 290
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8e-39 Score=306.99 Aligned_cols=251 Identities=27% Similarity=0.434 Sum_probs=202.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
++|.+.+.||+|+||.||+|....++. .|++|.+..........+.+|+.+++.++||||+++++++...+.
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~--- 90 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQ-----EVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDE--- 90 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCC-----EEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCc---
Confidence 689999999999999999998765544 399999875554555678899999999999999999999987653
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++|+||+++++|.+++.. ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++.
T Consensus 91 -~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 91 -LWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred -EEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 4999999999999999865 3578999999999999999999998 99999999999999999999999999887
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
....... ......|++.|+|||.+....++.++|||||||++|++++|..||............ .
T Consensus 164 ~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~--~----------- 228 (293)
T cd06647 164 QITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI--A----------- 228 (293)
T ss_pred ccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh--h-----------
Confidence 5443321 223457899999999998888999999999999999999999999754332111000 0
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.........+...+..+.+++.+||..+|++||++.+++..
T Consensus 229 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 229 --TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000111223456678999999999999999999999974
No 291
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-38 Score=305.51 Aligned_cols=265 Identities=23% Similarity=0.349 Sum_probs=194.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|++.+.||+|+||.||+|....++. .||+|.+...... ....+.+|+.+++.++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 76 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQ-----LVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK--- 76 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCc-----EEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC---
Confidence 578999999999999999999875544 4999998654322 2245678999999999999999999998665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||++ ++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 77 -~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 77 -TLTLVFEYLD-TDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred -eEEEEEecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 4599999997 4999988754 34789999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhH-HHHHHhhhhhccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSE-QKLLEWVRPHLTDAK 333 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~ 333 (441)
+...... .......++..|+|||++.+ ..++.++||||||+++|+|++|..||........ ............ ..
T Consensus 151 ~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 227 (291)
T cd07844 151 RAKSVPS--KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPT-EE 227 (291)
T ss_pred cccCCCC--ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCC-hh
Confidence 7543221 11223457889999998865 4588999999999999999999999965442111 111110000000 00
Q ss_pred chhhh---------cCCCC-CCc---chHHH--HHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMI---------LDPKL-EGK---YSIKL--AQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~---------~~~~~-~~~---~~~~~--~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..... ..+.. ... ..... ...+.+++.+||+.+|++||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 228 TWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000 00000 000 00011 267789999999999999999999875
No 292
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.3e-38 Score=305.81 Aligned_cols=264 Identities=17% Similarity=0.198 Sum_probs=190.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh-----------HHHHHHHHHhccCCCCCeeeE
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH-----------KEWVTEVNVLGVVEHPNLVKL 164 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-----------~~~~~E~~il~~l~hpnIv~l 164 (441)
.++|.+.++||+|+||.||+|.+..+... ...+++|.......... .....+...+..+.|+||+++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~--~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCI--NNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCccc--ccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 36899999999999999999998765221 12256665432221110 112234455667799999999
Q ss_pred EeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 165 IGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 165 ~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
++++..........+++||++ ..++.+.+.. ....++..+..++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 997765544333457888887 4467666654 23467888999999999999999998 99999999999999999
Q ss_pred CcEEEeecCCCCCCCCCCCc-----ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH
Q 013504 245 WNAKLSDFGLARLGPSDGLS-----HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~ 319 (441)
+.++|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|..||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 99999999999865322111 1123357999999999999999999999999999999999999999765322111
Q ss_pred -HH--HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 320 -KL--LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 320 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
.. .++... +.. ... ....++..+.+++..|+..+|++||++.++++.|
T Consensus 243 ~~~~~~~~~~~-~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFIKR-LHE---------GKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHHHH-hhh---------hhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 10 111111 000 100 0113457799999999999999999999999876
No 293
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.8e-39 Score=306.70 Aligned_cols=266 Identities=22% Similarity=0.346 Sum_probs=197.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|+..+.||.|+||.||+|.+..++. .|+||.+...... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-- 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK-- 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCC-----EEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCc--
Confidence 48888999999999999999876654 3899988654322 23567899999999999999999999876553
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+. ++|.+++.......+++..++.++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++
T Consensus 74 --~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 74 --LYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred --EEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 499999995 6899998765567889999999999999999999988 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhhcc---
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPHLT--- 330 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~~--- 330 (441)
....... .......+++.|+|||++.+.. ++.++|||||||++|+|+||+.||......... ...........
T Consensus 148 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07860 148 RAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 225 (284)
T ss_pred hhcccCc--cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Confidence 7543321 1123345788999999887644 588899999999999999999999754432211 11111100000
Q ss_pred ----cccchhhhcCCCCC---CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 ----DAKKFTMILDPKLE---GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ----~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........+..... ......++..+.+++.+||+.||.+||++++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 226 PGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000000000000 0001134567889999999999999999999885
No 294
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.6e-39 Score=304.17 Aligned_cols=254 Identities=30% Similarity=0.419 Sum_probs=201.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
++|+..+.||.|+||.||++.+..++.. +++|.+..... ....++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKI-----MAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG--- 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcE-----EEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC---
Confidence 3678888999999999999998766543 89998876543 33467889999999999999999999988764
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHE-GMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+ . +++|+||||+||+++.++.++|+|||.
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 73 -DISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred -EEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 4599999999999999997642 678999999999999999999998 6 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... .....++..|+|||.+.+..++.++||||||+++|+|++|..||........ ..........
T Consensus 148 ~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~----- 217 (265)
T cd06605 148 SGQLVNSL----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIFELLQYIV----- 217 (265)
T ss_pred chhhHHHH----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHHHHHHHHh-----
Confidence 87543221 1126789999999999999999999999999999999999999965421111 0111111100
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...........++..+.++|.+||..+|++||++.+++.
T Consensus 218 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 218 -----NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -----cCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 000000111126678999999999999999999999986
No 295
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-38 Score=302.07 Aligned_cols=248 Identities=28% Similarity=0.435 Sum_probs=199.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
-|+..+.||+|+||.||+|.+..++. .+|+|.+..... .....+.+|+.++..++||||+++++++....
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 75 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT---- 75 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCc-----EEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC----
Confidence 47778889999999999998766554 499998765432 23456888999999999999999999998765
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 76 KLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred eEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 35999999999999999864 4689999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...... .......|+..|+|||.+.+..++.++|||||||++|+|++|..||........... +.. .
T Consensus 150 ~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~----~---- 216 (277)
T cd06641 150 QLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL---IPK----N---- 216 (277)
T ss_pred ecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH---Hhc----C----
Confidence 654321 122345788999999999888889999999999999999999999965432211111 100 0
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
........++..+.+++.+||+.+|.+||++.+++..
T Consensus 217 ------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 ------NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ------CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0011223456778899999999999999999999983
No 296
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-39 Score=314.81 Aligned_cols=253 Identities=25% Similarity=0.389 Sum_probs=200.1
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
....|++.+.||+||-+.||++...+... +|+|++.... .+...-|..|+..|.+| .|.+|++|++|-..+
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~i------yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d 432 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQI------YALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD 432 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcc------hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC
Confidence 34679999999999999999998655443 6776665432 23456789999999999 699999999998876
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+ .+|+||||= ..+|..+|.++......| .+..+..|++.++.++|+. ||||.||||.|+|+-. |.+||+|
T Consensus 433 ~----~lYmvmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLID 502 (677)
T KOG0596|consen 433 G----YLYMVMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLID 502 (677)
T ss_pred c----eEEEEeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeee
Confidence 5 469999975 679999998765444444 8889999999999999998 9999999999999975 4899999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCC-----------CCccccchhHHHHHHHHHhCCCCCCCCCchhHHH
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-----------LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK 320 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~ 320 (441)
||+|.....+.........+||+.||+||.+.... .+.++||||||||||+|+.|+.||.....
T Consensus 503 FGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n----- 577 (677)
T KOG0596|consen 503 FGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN----- 577 (677)
T ss_pred echhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----
Confidence 99999888877777778899999999999886433 45789999999999999999999964221
Q ss_pred HHHhhhhhcccccchhhhcCCCCCCcchHHHH-HHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 321 LLEWVRPHLTDAKKFTMILDPKLEGKYSIKLA-QKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+ .++..+.+|...-.++.--. .++.++++.||..||.+||+..++|+
T Consensus 578 ~~----------aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 578 QI----------AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HH----------HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11 12333444433222222111 12899999999999999999999987
No 297
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=321.92 Aligned_cols=277 Identities=28% Similarity=0.404 Sum_probs=208.0
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc--CC
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE--RG 175 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~~ 175 (441)
|...+.||+|+||.||+|+++.++.. ||||.++.... ...+.+.+|+++|++++|||||+++++-.+... ..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~-----vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRL-----VAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred eeehhhhcCCccceeeeecccccccc-----hhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccc
Confidence 44556799999999999999888875 99999987553 334678899999999999999999887655441 12
Q ss_pred eeEEEEEeccCCCChHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc--CCCc--EEEe
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSR-FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD--EQWN--AKLS 250 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~--~~~~--~kl~ 250 (441)
...++|||||.||+|...|.+- +...+++.+.+.++.++..||.|||++ +|+||||||.||++- .+|+ .||+
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeee
Confidence 2458999999999999999743 356899999999999999999999998 999999999999993 3343 7999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh-
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH- 328 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~- 328 (441)
|||.|+...... ...+++||+.|++||++.. +.|+..+|.|||||++|+++||..||..........-+.|....
T Consensus 167 DfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tk 243 (732)
T KOG4250|consen 167 DFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITK 243 (732)
T ss_pred cccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhcc
Confidence 999999876543 5677999999999999984 88999999999999999999999999654332211111111110
Q ss_pred cccc----------cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC--CHHHHHHHHHHHHhh
Q 013504 329 LTDA----------KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP--KMSEVVEVLNKIVDA 386 (441)
Q Consensus 329 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~ 386 (441)
.++. +.+.....-.............+...+..+|.-+|++|. ...+....+.++++.
T Consensus 244 kp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 244 KPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred CCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 0110 000000000112223334455677788889999999999 888888888887753
No 298
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.4e-38 Score=304.81 Aligned_cols=267 Identities=22% Similarity=0.337 Sum_probs=196.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
+++|.+.+.||+|+||.||+|....++.. |++|.+....... ...+.+|+.+++.++|+||+++++++...+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~-----~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-- 76 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQL-----VALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-- 76 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcE-----EEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC--
Confidence 46899999999999999999998766553 9999987543322 245678999999999999999999987655
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+. ++|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+|||++.++.++|+|||+
T Consensus 77 --~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 77 --TLTFVFEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred --eEEEEEeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEecccc
Confidence 3599999995 6887777543 35678888999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc--
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD-- 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-- 331 (441)
++...... .......+++.|+|||++.+. .++.++|||||||++|+|++|..||.........-...|.......
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 227 (291)
T cd07870 150 ARAKSIPS--QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTED 227 (291)
T ss_pred ccccCCCC--CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChh
Confidence 87543321 112334678999999998754 5788999999999999999999999755432211111010000000
Q ss_pred -------ccchh-hhcCCCCCCcch-----HHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 -------AKKFT-MILDPKLEGKYS-----IKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 -------~~~~~-~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..... ............ ...+..+.+++.+|+..||++|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 228 TWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000 000000000000 012457889999999999999999999875
No 299
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.1e-38 Score=303.93 Aligned_cols=252 Identities=29% Similarity=0.423 Sum_probs=193.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHH-hccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNV-LGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|+||.||+|.+..++.. ||+|.+..... .....+..|+.+ ++.++||||+++++++.....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~- 74 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTI-----MAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGD- 74 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcE-----EEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCc-
Confidence 4788999999999999999998876654 99998875432 233456667765 556799999999999986653
Q ss_pred CeeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
.++||||++ |+|.+++... ....+++..++.++.||+.||.|||++ .+++||||||+|||++.++.+||+||
T Consensus 75 ---~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~df 148 (283)
T cd06617 75 ---VWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDF 148 (283)
T ss_pred ---EEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeec
Confidence 499999995 6888887642 235789999999999999999999974 27999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCcccccc----CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT----GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
|+++...... ......|+..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ...+......
T Consensus 149 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~- 223 (283)
T cd06617 149 GISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQLKQVVEE- 223 (283)
T ss_pred cccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHHHHHHhc-
Confidence 9998653221 1233568899999998865 45688999999999999999999999643211 1111111100
Q ss_pred cccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 LTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+.+ ....++..+.+++.+||..+|.+||++.+++.
T Consensus 224 ----------~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 ----------PSPQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ----------CCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011 11235678999999999999999999999987
No 300
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.8e-38 Score=297.76 Aligned_cols=253 Identities=31% Similarity=0.471 Sum_probs=200.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|.+.+.||+|+||.||+|....++. .+++|.+...... ..+.+.+|+.+++.++|+||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--- 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGE-----LMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE--- 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCc-----EEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC---
Confidence 47888999999999999999876554 3999998766543 4577889999999999999999999987655
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+|+||+|+||++++++.+||+|||++
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 73 -KVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred -EEEEEEecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 35999999999999999976 35688999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcce--eeceecccCcCCccccccCC---CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 256 RLGPSDGLSHV--STAVVGTIGYAAPEYIQTGR---LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 256 ~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
........... .....+++.|+|||++.+.. ++.++||||||+++++|++|..||........ ....... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~--~~~~~~~--~ 222 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ--IMFHVGA--G 222 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH--HHHHHhc--C
Confidence 87543322111 12356889999999998766 88999999999999999999999965432111 1111100 0
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+.+. ....++..+.+++.+||+.+|.+||++.+++.
T Consensus 223 --------~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 --------HKPPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --------CCCCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001111 11134677889999999999999999999875
No 301
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.2e-39 Score=314.96 Aligned_cols=277 Identities=23% Similarity=0.307 Sum_probs=202.9
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc-
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE- 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~- 173 (441)
+++|++.+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGV-----KVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE 78 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCC-----eEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence 4689999999999999999999877654 399999864322 234567889999999999999999998765442
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.....|+||||++ ++|.+.+.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 79 SFNDVYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred ccceEEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccc
Confidence 1224689999995 588887754 5799999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCc-ceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 254 LARLGPSDGLS-HVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 254 la~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
+++........ .......||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.................. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~-~~ 230 (336)
T cd07849 152 LARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT-PS 230 (336)
T ss_pred ceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC-CC
Confidence 98865332211 11233578999999998654 56889999999999999999999999654322211111000000 00
Q ss_pred ccchhhhcCC-----------CCCCc---chHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH--HHHHHh
Q 013504 332 AKKFTMILDP-----------KLEGK---YSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV--LNKIVD 385 (441)
Q Consensus 332 ~~~~~~~~~~-----------~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 385 (441)
......+.+. ..... .....+..+.+++.+||+.+|++||++.++++. ++....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 0000000000 00000 011245678999999999999999999999984 665543
No 302
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.6e-38 Score=304.73 Aligned_cols=268 Identities=24% Similarity=0.337 Sum_probs=199.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||.|+||.||+|.+..++. .+++|.+...... ....+.+|+.++++++||||+++++++...+..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGE-----IVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCc-----EEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCC
Confidence 578888999999999999999876654 3899988654322 123567899999999999999999998766322
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..|+||||++ ++|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+|||++.++.++|+|||+
T Consensus 80 --~~~lv~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 80 --KIYMVMEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred --cEEEEehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 4699999996 5999988754 24689999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH-Hhhhh-----
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRP----- 327 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~----- 327 (441)
+....... .......+++.|+|||.+.+. .++.++||||||+++|+|++|..||...........+ .....
T Consensus 153 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (293)
T cd07843 153 AREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKI 230 (293)
T ss_pred eeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Confidence 98654432 122335678899999988764 4688999999999999999999999755433222111 10000
Q ss_pred --h---cccc--cchhhhcCCCCCCcchHH-HHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 --H---LTDA--KKFTMILDPKLEGKYSIK-LAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 --~---~~~~--~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. +... ..........+...++.. +++.+.+++.+||+.+|++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 0000 000000001111112222 4677899999999999999999999985
No 303
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.5e-38 Score=305.57 Aligned_cols=265 Identities=22% Similarity=0.290 Sum_probs=198.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-----hhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-----GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
+|...+.||+|+||.||+|.+..++. .|++|.+...... ....+..|+.+++.++|+||+++++++.+.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGR-----IVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCc-----EEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC
Confidence 47788899999999999999876654 4999998765432 2345678999999999999999999998754
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..++||||+ +|+|.+++.... ..+++..++.++.||+.||.|||++ +|+|+||||+|||++.++.++|+||
T Consensus 76 ----~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 ----NINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred ----EEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 459999999 999999997642 4799999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH-Hhhhhhcc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRPHLT 330 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~~~~ 330 (441)
|+++....... ......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||............ ........
T Consensus 147 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
T cd07841 147 GLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTE 224 (298)
T ss_pred eeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCch
Confidence 99986544321 1223456889999998855 45788999999999999999998888654432221111 11000000
Q ss_pred cc----cchhhhcCCCCC-----CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DA----KKFTMILDPKLE-----GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~----~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. ............ .......+..+.+++.+||..+|++||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 225 ENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00 000000000000 0011234678899999999999999999999998
No 304
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.3e-38 Score=293.45 Aligned_cols=250 Identities=30% Similarity=0.501 Sum_probs=203.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
+|...+.||+|++|.||++.+..++. .+++|++..........+.+|+.+++.++||||+++++++.... .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~ 71 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGK-----EVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD----E 71 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCc-----EEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----e
Confidence 47788899999999999999876544 39999987765545678889999999999999999999988765 3
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++++||+++++|.+++.... ..+++..+..++.|++.||.|||.. +++||||+|+||++++++.++|+|||.+..
T Consensus 72 ~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 72 LWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 599999999999999987642 5789999999999999999999997 999999999999999999999999999987
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTM 337 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (441)
...... .....|+..|+|||.+.+..++.++||||||+++++|++|..||............. .. ..
T Consensus 148 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~-----~~-- 214 (253)
T cd05122 148 LSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA---TN-----GP-- 214 (253)
T ss_pred cccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH---hc-----CC--
Confidence 554321 345678999999999988889999999999999999999999997543222111111 00 00
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 338 ILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 338 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.+ .....++..+.+++.+||..||++||++.++++
T Consensus 215 ---~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 215 ---PGL--RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ---CCc--CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 011123577999999999999999999999885
No 305
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.5e-39 Score=301.45 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=202.0
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
+|++.+.||.|+||.||+|.+..++. .+++|.+..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKK-----MFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE-- 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCc-----EEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC--
Confidence 48889999999999999999876554 399999875432 23567889999999999999999999887655
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++||||+.+++|.+++... ..+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||+
T Consensus 74 --~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 74 --NMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred --eEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 459999999999999999763 5889999999999999999999988 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... ......|+..|+|||++.+..++.++|+||||+++|+|++|..||.................
T Consensus 147 ~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 216 (258)
T cd05578 147 ATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------- 216 (258)
T ss_pred ccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-------
Confidence 88654432 22345788999999999888899999999999999999999999976554322222211110
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH--HHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM--SEVV 377 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 377 (441)
.....+...+..+.+++.+||..||.+||++ ++++
T Consensus 217 --------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 --------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0112233456889999999999999999999 5544
No 306
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.1e-38 Score=348.53 Aligned_cols=264 Identities=28% Similarity=0.477 Sum_probs=207.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
...|....+||+|+||.||+|.+..++. .||||.+...... ...|+.++++++|||||+++++|.+.+..
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~- 758 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGM-----QFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGA- 758 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCc-----EEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCC-
Confidence 4567788899999999999999866554 4999988654321 13568899999999999999999876643
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
|+||||+++|+|.+++. .++|..+..++.|++.||.|||..+..+|+||||||+||+++.++.+++. ||..
T Consensus 759 ---~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~ 829 (968)
T PLN00113 759 ---YLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLP 829 (968)
T ss_pred ---EEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccc
Confidence 99999999999999995 38899999999999999999996555699999999999999999888875 6665
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||+.... .......|.+..... ...
T Consensus 830 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~-~~~ 901 (968)
T PLN00113 830 GLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSD-CHL 901 (968)
T ss_pred ccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCc-cch
Confidence 53321 1224689999999999999999999999999999999999999954322 122344444433222 223
Q ss_pred hhhcCCCCCC--cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 336 TMILDPKLEG--KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 336 ~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
...+++.+.. ........++.+++.+||+.+|++||+|.+|++.|+++...
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred hheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 3445555433 23345566788999999999999999999999999998754
No 307
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-38 Score=299.00 Aligned_cols=250 Identities=26% Similarity=0.436 Sum_probs=200.2
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|+||.||+|....++.. +++|.+..... ...+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~--- 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEH-----CVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG--- 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCce-----EEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC---
Confidence 478889999999999999998776554 89998865422 23456789999999999999999999987665
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc-EEEeecCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN-AKLSDFGL 254 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~-~kl~DFGl 254 (441)
..++|+||+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++. ++|+|||.
T Consensus 73 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 73 -RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred -eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 359999999999999999765555689999999999999999999998 9999999999999988864 69999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... .......|++.|+|||++.+..++.++|+||||+++++|++|..||........ .......
T Consensus 149 ~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~------- 217 (257)
T cd08225 149 ARQLNDSM--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL--VLKICQG------- 217 (257)
T ss_pred chhccCCc--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHhcc-------
Confidence 88654322 122335689999999999888899999999999999999999999965432111 1111100
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+ ......++..+.+++.+||..+|++||++.+++.
T Consensus 218 -------~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 218 -------YF-APISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -------cC-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00 0111234567999999999999999999999986
No 308
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.2e-38 Score=311.59 Aligned_cols=272 Identities=21% Similarity=0.282 Sum_probs=204.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
..+|++.+.||.|+||.||+|....++. .|++|.+..... .....+.+|+.+|+.++||||+++++++.....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGK-----KVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCC-----EEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 3689999999999999999999887665 399998875432 234567789999999999999999998876554
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.....++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 79 DFKDVYVVMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred CCceEEEEEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 4456799999995 689999865 35699999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCc--ceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 254 LARLGPSDGLS--HVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 254 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
++......... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~ 232 (334)
T cd07855 153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS 232 (334)
T ss_pred cceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence 99764332211 11234578999999998765 4688999999999999999999999976543322211111000000
Q ss_pred c-------ccchhh---hcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 D-------AKKFTM---ILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~-------~~~~~~---~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ...... ........ ......+..+.+++.+||+.+|++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 000000 00000000 011235678999999999999999999999988
No 309
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.2e-38 Score=301.48 Aligned_cols=253 Identities=30% Similarity=0.474 Sum_probs=204.6
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.++.|+....||.|+||.||+|.+..++. .+++|++..... ....+.+|+.+++.++|+||+++++++....
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 88 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGK-----EVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD-- 88 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCc-----EEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC--
Confidence 45678888999999999999999875543 489999876543 4567889999999999999999999998765
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
..++|+||+++++|.+++.... ..+++..+..++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|||+
T Consensus 89 --~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 89 --ELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred --EEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 4599999999999999998742 4799999999999999999999997 999999999999999999999999998
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (441)
+....... .......+++.|+|||++.+..++.++|||||||++|+|++|..||....+...... ......
T Consensus 163 ~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~--~~~~~~----- 233 (286)
T cd06614 163 AAQLTKEK--SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL--ITTKGI----- 233 (286)
T ss_pred hhhhccch--hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhcCC-----
Confidence 87543321 122345688999999999888899999999999999999999999975443221111 110000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+. ......++..+.+++.+||+.+|.+||++.+++.
T Consensus 234 ------~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 234 ------PP--LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ------CC--CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00 0111235678999999999999999999999987
No 310
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.8e-38 Score=297.47 Aligned_cols=253 Identities=24% Similarity=0.385 Sum_probs=199.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcccc-----CchhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR-----GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
.+|.+.+.||+|+||.||+|.+..++. .+++|.+... .......+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGR-----ELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCC-----EEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence 478999999999999999999876654 4899987432 122345788999999999999999999998664
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
... ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|
T Consensus 77 ~~~--~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 77 EEK--KLSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CCC--EEEEEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 432 45899999999999999975 35688999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCC-cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 252 FGLARLGPSDGL-SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 252 FGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
||+++....... ........|+..|+|||++.+..++.++|||||||++++|++|+.||....... ...+..
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~----- 222 (264)
T cd06653 150 FGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA--AIFKIA----- 222 (264)
T ss_pred cccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH--HHHHHH-----
Confidence 999986432111 111234568999999999988889999999999999999999999996542211 111111
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........+..+++.+.+++.+||. +|..||++.+++.
T Consensus 223 ---------~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 223 ---------TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ---------cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0111122344567889999999999 5799999998775
No 311
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=336.63 Aligned_cols=256 Identities=26% Similarity=0.376 Sum_probs=208.8
Q ss_pred HHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC---chhhHHHHHHHHHhccCCCCCeeeEEeE
Q 013504 91 ELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG---LQGHKEWVTEVNVLGVVEHPNLVKLIGY 167 (441)
Q Consensus 91 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~ 167 (441)
+++...++|.++++||+|+||.|..++++.++.. ||+|++++-. ......|..|-.||..-+.+-|++++-.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~V-----YAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA 143 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKV-----YAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA 143 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccc-----hhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence 4555668999999999999999999999998875 9999998732 2334568889999999999999999888
Q ss_pred EeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcE
Q 013504 168 CAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNA 247 (441)
Q Consensus 168 ~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~ 247 (441)
|++.. ++|+||||++||+|...+... ..+|+..+.+++..|+.||.-||+- |+|||||||+|||||..|.+
T Consensus 144 FQD~~----~LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHi 214 (1317)
T KOG0612|consen 144 FQDER----YLYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHI 214 (1317)
T ss_pred hcCcc----ceEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcE
Confidence 88776 459999999999999999764 3899999999999999999999987 99999999999999999999
Q ss_pred EEeecCCCCCCCCCCCcceeeceecccCcCCccccc----c-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 013504 248 KLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ----T-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 248 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~ 322 (441)
||+|||.|-....++ ...+...+|||.|++||+++ + +.|+..+|+||+||++|||+.|..||-...- +
T Consensus 215 kLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl------v 287 (1317)
T KOG0612|consen 215 KLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL------V 287 (1317)
T ss_pred eeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH------H
Confidence 999999998776555 33566789999999999985 2 5789999999999999999999999953322 2
Q ss_pred HhhhhhcccccchhhhcCCCCCCcch--HHHHHHHHHHHHHhhcccCCCCCC---HHHHHH
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYS--IKLAQKLAAVANKCLARQAKGRPK---MSEVVE 378 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 378 (441)
..... +++-.-.-.+| .+++....+||.+.++ +|+.|.. ++++-.
T Consensus 288 eTY~K----------Im~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 288 ETYGK----------IMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred HHHHH----------HhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 11111 11111111122 3477889999999887 6888888 777766
No 312
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.6e-38 Score=303.69 Aligned_cols=247 Identities=31% Similarity=0.447 Sum_probs=196.6
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
+.|...+.||+|+||.||+|....++. .|++|.+..... .....+.+|+.+++.++||||+++++++...+.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNE-----VVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCc-----EEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCe
Confidence 568888999999999999999876554 499998864432 223568899999999999999999999987653
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.++||||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||
T Consensus 90 ----~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 ----AWLVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred ----EEEEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 499999996 6777777543 35789999999999999999999988 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
++...... ....|++.|+|||++. ...++.++||||||+++|||++|..||..............
T Consensus 161 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~------ 228 (307)
T cd06607 161 SASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ------ 228 (307)
T ss_pred cceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc------
Confidence 98764322 2357889999999874 45688899999999999999999999965432221111100
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. .+ ......++..+.+++.+||..+|++||++.+|+..
T Consensus 229 -~~------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 229 -ND------SP---TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -CC------CC---CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 00 01122466789999999999999999999999874
No 313
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=346.82 Aligned_cols=254 Identities=29% Similarity=0.383 Sum_probs=205.4
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
.+-+|+....||.|.||.||-|+...+++. .|+|.+..... ...+.+.+|..+|..++|||+|++||+-..++
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGel-----lAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe 1307 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGEL-----LAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE 1307 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccch-----hhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH
Confidence 446788889999999999999999998886 67777654332 23456779999999999999999999988877
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
.. +|.||||++|+|.+.+.. +...++.....+..|++.|+.|||+. |||||||||+||||+.+|.+|++||
T Consensus 1308 kv----~IFMEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1308 KV----YIFMEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred HH----HHHHHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecc
Confidence 65 889999999999999976 56778888888999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCC--CcceeeceecccCcCCccccccC---CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 253 GLARLGPSDG--LSHVSTAVVGTIGYAAPEYIQTG---RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 253 Gla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
|.|....... .........||+.|||||++.+. ....+.|||||||+++||+||+.||...... .+-+.
T Consensus 1379 Gsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy----- 1452 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMY----- 1452 (1509)
T ss_pred cceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHHh-----
Confidence 9998765432 11223467899999999999764 3566899999999999999999999643321 00000
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+...-.+..|..++.+-.+++.+||..||+.|.++.++++
T Consensus 1453 ----------~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1453 ----------HVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ----------HHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 01111233455668889999999999999999988887765
No 314
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.1e-38 Score=308.12 Aligned_cols=275 Identities=25% Similarity=0.365 Sum_probs=202.5
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcccc--CchhhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR--GLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
..++|++.+.||+|+||.||+|.+..++. .+++|.+... .......+.+|+.+++++ +||||+++++++...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKE-----VVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCe-----EEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 45789999999999999999999876554 3899987542 223345677899999999 999999999998764
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
+.. ..++||||++ ++|..++.. ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 ~~~--~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 80 NDK--DIYLVFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred CCc--eEEEEecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 432 4699999996 599998865 2788999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCc---ceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 252 FGLARLGPSDGLS---HVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 252 FGla~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
||+++........ .......||..|+|||.+.+ ..++.++||||||+++|+|++|+.||.................
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 230 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9999865433211 12334678999999998755 4578899999999999999999999965443322111111100
Q ss_pred hcccc-------cchhhhcC----CCC--CCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH--HHHH
Q 013504 328 HLTDA-------KKFTMILD----PKL--EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV--LNKI 383 (441)
Q Consensus 328 ~~~~~-------~~~~~~~~----~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~ 383 (441)
..... .....+++ ... .......++..+.+++.+||+.+|++||++.++++. +...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 00000 00000000 000 001111256789999999999999999999999983 4444
No 315
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-39 Score=335.99 Aligned_cols=260 Identities=24% Similarity=0.379 Sum_probs=195.4
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
....+|+..++||+||||.||+++++-++.. ||||++.... ......+.+|+.+|++|+|||||+++..+.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~-----YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGRE-----YAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVEST 550 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchh-----hhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence 4567899999999999999999998876654 9999998764 223467889999999999999999987665432
Q ss_pred --------------------------------------------------------------------------------
Q 013504 173 -------------------------------------------------------------------------------- 172 (441)
Q Consensus 173 -------------------------------------------------------------------------------- 172 (441)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred ---------------------------cCC--------eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 013504 173 ---------------------------ERG--------IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARG 217 (441)
Q Consensus 173 ---------------------------~~~--------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~ 217 (441)
... ..+||-||||+..+|.+++..+... -.....++++++|++|
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEG 709 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHH
Confidence 000 2457889999988888777653211 1467889999999999
Q ss_pred HHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC----C------------CCCcceeeceecccCcCCccc
Q 013504 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP----S------------DGLSHVSTAVVGTIGYAAPEY 281 (441)
Q Consensus 218 L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~----~------------~~~~~~~~~~~gt~~y~aPE~ 281 (441)
|.|+|++ |||||||||.||+|++++.|||+|||+|.... . .......+..+||.-|+|||+
T Consensus 710 LaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999998 99999999999999999999999999998621 0 001113456899999999999
Q ss_pred cccCC---CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHH
Q 013504 282 IQTGR---LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAV 358 (441)
Q Consensus 282 ~~~~~---~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 358 (441)
+.+.. |+.|+|+||||||++||+. ||.... +....+..++....+ .. ..+..+..+.-..+
T Consensus 787 l~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--ERa~iL~~LR~g~iP----------~~-~~f~~~~~~~e~sl 850 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--ERASILTNLRKGSIP----------EP-ADFFDPEHPEEASL 850 (1351)
T ss_pred hcccccccccchhhhHHHHHHHHHHhc---cCCchH--HHHHHHHhcccCCCC----------CC-cccccccchHHHHH
Confidence 97654 9999999999999999984 575332 222222222211110 00 11222233456689
Q ss_pred HHHhhcccCCCCCCHHHHHH
Q 013504 359 ANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 359 i~~cl~~dP~~RPs~~evl~ 378 (441)
|++|++.||.+|||+.++|.
T Consensus 851 I~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 851 IRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhcCCCccCCCHHHHhh
Confidence 99999999999999999986
No 316
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.5e-38 Score=300.42 Aligned_cols=242 Identities=27% Similarity=0.405 Sum_probs=186.6
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhc---cCCCCCeeeEEeEEeccccCCee
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLG---VVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~---~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
+||+|+||.||++....++. .+|+|.+...... ....+.+|..++. ..+||||+.+++++...+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---- 71 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDK---- 71 (279)
T ss_pred CcccCCCeEEEEEEECCCCc-----EEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCe----
Confidence 48999999999999876554 4899988654321 1223344544433 3479999999999887653
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++..
T Consensus 72 ~~lv~e~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 4999999999999999875 35799999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
..... .....||+.|+|||.+.. ..++.++|||||||++|+|++|..||................
T Consensus 147 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---------- 212 (279)
T cd05633 147 FSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---------- 212 (279)
T ss_pred ccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh----------
Confidence 43221 223578999999998864 568899999999999999999999996543322211111100
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
......+..++..+.+++.+||..||.+|| +++++++
T Consensus 213 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 213 -----TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred -----cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 001122344667899999999999999999 5888877
No 317
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.5e-38 Score=300.59 Aligned_cols=248 Identities=29% Similarity=0.448 Sum_probs=197.2
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCC---CCCeeeEEeEEecccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVE---HPNLVKLIGYCAEDDE 173 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~ 173 (441)
.|+..+.||+|+||.||+|.+..++. .+++|.+..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~- 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGR-----VVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP- 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCc-----EEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-
Confidence 47778899999999999999876654 499998865432 33456788999999986 999999999987654
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++++|.+++.. ..+++..++.++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|||
T Consensus 76 ---~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 76 ---RLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred ---EEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 45999999999999999865 3789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
++....... .......|+..|+|||.+.++ .++.++|||||||++|+|++|..||......... ..... .
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~---~~~~~----~ 217 (277)
T cd06917 147 VAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM---MLIPK----S 217 (277)
T ss_pred ceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh---hcccc----C
Confidence 998654432 122345789999999988654 4688999999999999999999999754322111 11000 0
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+.+.. ..++..+.+++.+||..||++||++.+++.
T Consensus 218 ------~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 ------KPPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ------CCCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0011111 125567899999999999999999999987
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5e-38 Score=299.55 Aligned_cols=266 Identities=22% Similarity=0.360 Sum_probs=198.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
+|+..+.||.|++|.||+|.+..++. .||||.+...... ....+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGE-----IVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENK--- 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCe-----EEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCc---
Confidence 58889999999999999999876654 4999988754332 24567789999999999999999999987653
Q ss_pred eEEEEEeccCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRF-QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+++ +|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++
T Consensus 73 -~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~ 147 (284)
T cd07836 73 -LMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLA 147 (284)
T ss_pred -EEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchh
Confidence 4999999975 8988886532 24689999999999999999999988 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhh-----
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPH----- 328 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~----- 328 (441)
+...... .......+|..|++||++.+. .++.++|||||||++|+|++|..||.......... ........
T Consensus 148 ~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07836 148 RAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTW 225 (284)
T ss_pred hhhcCCc--cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhH
Confidence 7543321 112335678999999988664 56889999999999999999999997554322211 11111000
Q ss_pred --cccccchhhhcCCCC---CCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 --LTDAKKFTMILDPKL---EGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 --~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.....+........ ........+..+.+++.+||+.||.+||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 226 PGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000000 00111234678899999999999999999999885
No 319
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2e-38 Score=310.26 Aligned_cols=278 Identities=23% Similarity=0.325 Sum_probs=206.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.+.||+|+||.||+|.+..++. .||||.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNE-----KVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCC-----eEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence 4579999999999999999999876654 39999886532 2234567789999999999999999998865432
Q ss_pred -CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 174 -RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 174 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
.....|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 152 (337)
T cd07858 79 EAFNDVYIVYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDF 152 (337)
T ss_pred cccCcEEEEEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcC
Confidence 1124699999995 789998865 46799999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
|+++...... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.....................
T Consensus 153 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 153 GLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred ccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 9998654332 12334578999999998765 46889999999999999999999999654322211111100000000
Q ss_pred -------ccchhhh---c----CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH--HHHHHhhh
Q 013504 332 -------AKKFTMI---L----DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV--LNKIVDAA 387 (441)
Q Consensus 332 -------~~~~~~~---~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~~ 387 (441)
....... . ++... .....+++.+.+++.+||+.+|++||+++++++. +..+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 0000000 0 00000 1112456788999999999999999999999984 76665443
No 320
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-38 Score=304.84 Aligned_cols=254 Identities=29% Similarity=0.426 Sum_probs=193.7
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCC-CCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~ 175 (441)
+|...+.||+|+||.||++.+..++. .+|+|.+..... .....+.+|+.++.++. ||||+++++++.....
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~-- 77 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGT-----IMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGD-- 77 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCC-----EEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCc--
Confidence 45566789999999999999877654 399999875432 23456789999999995 9999999999876553
Q ss_pred eeEEEEEeccCCCChHHHH---hhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 176 IQRLLIYEYMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
.+++|||+. ++|.++. .......+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.++|+||
T Consensus 78 --~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 78 --CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred --EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeec
Confidence 489999985 4555543 333346799999999999999999999963 28999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccC---CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG---RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|+++...... ......|++.|+|||++.+. .++.++|||||||++|+|++|+.||..... ..........
T Consensus 153 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~--- 225 (288)
T cd06616 153 GISGQLVDSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQVVK--- 225 (288)
T ss_pred chhHHhccCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhhhcC---
Confidence 9987543321 12334689999999998776 688999999999999999999999964431 1111111000
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ..+.+.......++..+.+++.+||..+|++||++.+|+.
T Consensus 226 -~-------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 226 -G-------DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred -C-------CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0011111222346778999999999999999999999988
No 321
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.8e-38 Score=300.55 Aligned_cols=245 Identities=28% Similarity=0.438 Sum_probs=193.2
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||+|+||+||+|....++.. +++|.+..... .....+..|+.+|+.++||||+++++++...+ ..|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~lv 71 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKM-----YACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD----DLCLV 71 (277)
T ss_pred CCCCCceeEEEEEEcCCCcE-----EEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC----eEEEE
Confidence 69999999999988766543 89998865332 22345678999999999999999999987665 35999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++++|.+++.......+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 72 MTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred EecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 9999999999999765445799999999999999999999998 9999999999999999999999999998764331
Q ss_pred CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
.......++..|+|||++.+..++.++|||||||++++|++|+.||...........+... ...
T Consensus 149 ---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------- 212 (277)
T cd05577 149 ---KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR--TLE----------- 212 (277)
T ss_pred ---CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc--ccc-----------
Confidence 1223456788999999998888999999999999999999999999654432111111100 000
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
.....+..+++.+.+++.+||+.+|.+|| ++.+++.
T Consensus 213 -~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 213 -MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred -ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 01112234567889999999999999999 6666664
No 322
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-39 Score=315.26 Aligned_cols=246 Identities=27% Similarity=0.426 Sum_probs=208.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
...|.+...||+|.|+.|.+|++..++.. ||||.+.+..... ...+.+|+++|..++|||||+++.+......
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~-----VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTE-----VAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCce-----EEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 45789999999999999999999887654 9999998765433 3457899999999999999999999987764
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
+|+||||+.+|.+++++.. .+...+..+..++.|+..+++|||++ .|+|||||.+||||+.+.++||+|||
T Consensus 130 ----lylV~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 130 ----LYLVMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred ----eEEEEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccc
Confidence 5999999999999999987 46677789999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRL-TYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
++.++... ....+.+|++.|.|||++.+..| ++.+|+||+|+++|-|+.|..||++..-..
T Consensus 201 fS~~~~~~---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------------- 262 (596)
T KOG0586|consen 201 FSTFFDYG---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------------- 262 (596)
T ss_pred cceeeccc---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc---------------
Confidence 99987643 35677899999999999999887 478999999999999999999998643221
Q ss_pred cchhhhcCCCCCCcchH--HHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSI--KLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.++.+.+.+.. -.+.+..++|+++|-.+|.+|++++++.+
T Consensus 263 -----Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 263 -----LRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred -----ccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 122222222222 24457889999999999999999999988
No 323
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=6.1e-38 Score=298.50 Aligned_cols=263 Identities=23% Similarity=0.289 Sum_probs=193.3
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCC-CCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~ 176 (441)
|++.+.||+|+||.||+|....++.. +|+|.+...... ......+|+.++.++. ||||+++++++.+....
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~-----~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~-- 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKY-----YAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTG-- 73 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcE-----EEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCC--
Confidence 66788999999999999998766543 899988754221 2234457889998884 99999999999876222
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||++ ++|.+++..+ ...+++..++.++.|++.||.|||+. +++||||||+||+++. +.+||+|||+++
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 74 RLALVFELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred cEEEEEecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 4599999996 5888888653 35789999999999999999999998 9999999999999999 999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc----
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD---- 331 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~---- 331 (441)
...... ......++..|+|||++.. ..++.++|||||||++|||++|..||......+..............
T Consensus 148 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (282)
T cd07831 148 GIYSKP---PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLK 224 (282)
T ss_pred ccccCC---CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 654322 1223568899999997654 55788999999999999999999999765432221111100000000
Q ss_pred ----ccchhhhcCCCCCC----cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 ----AKKFTMILDPKLEG----KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ----~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.... ....+.... .....++..+.+++.+||..+|++||++.++++
T Consensus 225 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 225 KFRKSRHM-NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred hhcccccc-cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000 000000000 011245788999999999999999999999986
No 324
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.2e-38 Score=300.82 Aligned_cols=265 Identities=22% Similarity=0.326 Sum_probs=197.0
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
|++.+.||.|++|.||+|.+..++. .|++|++..... .....+.+|+.+++.++||||+++++++.+.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~---- 71 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGE-----IVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN---- 71 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCC-----EEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC----
Confidence 6677899999999999999876554 489998865432 22356788999999999999999999987664
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||++ ++|.+++.......+++..++.++.|++.||.|||++ +++||||+|+||+++.++.++|+|||+++
T Consensus 72 ~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 72 KLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred eEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 4599999994 6999999765445789999999999999999999998 99999999999999999999999999997
Q ss_pred CCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhhc-----
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPHL----- 329 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~----- 329 (441)
....... ......+++.|+|||++.+. .++.++||||||+++|+|++|+.||......... ..........
T Consensus 148 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (283)
T cd07835 148 AFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWP 225 (283)
T ss_pred ccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhh
Confidence 5433211 12234568899999987664 5788999999999999999999999765432211 1111110000
Q ss_pred --ccccchhhhcC---CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 330 --TDAKKFTMILD---PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 330 --~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.....+..... ..........++..+.+++.+||+.+|.+||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 226 GVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000000000 00001112234567889999999999999999999985
No 325
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.3e-38 Score=300.63 Aligned_cols=269 Identities=20% Similarity=0.278 Sum_probs=197.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
++|++.+.||+|+||.||+|.+..++. .||+|.+...... ....+.+|+.+++.+ +||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGK-----LVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCc-----EEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence 468899999999999999999877654 3899987654322 235678899999999 46999999999876554
Q ss_pred -CCeeEEEEEeccCCCChHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC-CCcEE
Q 013504 174 -RGIQRLLIYEYMPNRSVQDHLTSRF---QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAK 248 (441)
Q Consensus 174 -~~~~~~lv~E~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~-~~~~k 248 (441)
.....|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||++ +|+||||||+||+++. ++.+|
T Consensus 76 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 76 NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEE
Confidence 22235899999975 8988886432 34689999999999999999999998 9999999999999998 88999
Q ss_pred EeecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhh
Q 013504 249 LSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVR 326 (441)
Q Consensus 249 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~ 326 (441)
|+|||+++....... ......+++.|+|||++.+ ..++.++||||||+++|+|++|..||.......... ......
T Consensus 152 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 229 (295)
T cd07837 152 IADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLG 229 (295)
T ss_pred EeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999885433211 1223467889999998765 457899999999999999999999997544322211 111110
Q ss_pred hhcccccchhhhc-------CCCCC----CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 327 PHLTDAKKFTMIL-------DPKLE----GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 327 ~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. .....+.... .+... ....+.++..+.++|.+||..||.+||++.+++.
T Consensus 230 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 230 T--PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred C--CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 0000000000 00000 0011235677899999999999999999999875
No 326
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=6.2e-38 Score=302.57 Aligned_cols=273 Identities=22% Similarity=0.329 Sum_probs=199.6
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.++|++.+.||+|+||.||+|....++. .||||.+...... ....+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQ-----IVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT 85 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCc-----EEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence 4579999999999999999999877654 4999988643322 22345689999999999999999999876542
Q ss_pred C----CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 174 R----GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 174 ~----~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
. ....++||||+. ++|.+++... ...+++..++.++.||+.||.|||++ +++|+||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 86 PYNRYKGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred cccCCCceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 1 234699999995 5888888653 34789999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCc--ceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhh
Q 013504 250 SDFGLARLGPSDGLS--HVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVR 326 (441)
Q Consensus 250 ~DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~ 326 (441)
+|||++......... .......++..|+|||++.+. .++.++||||||+++|+|++|..||...........+..+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999865432211 112335678899999988664 47889999999999999999999997665443333333222
Q ss_pred hhcccc-----cc---hhhhc-CCCCCCcchH-----HHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 327 PHLTDA-----KK---FTMIL-DPKLEGKYSI-----KLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 327 ~~~~~~-----~~---~~~~~-~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...... .. ..... .......... .....+.++|.+||..||.+||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 111100 00 00000 0000000000 12346779999999999999999999885
No 327
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8e-38 Score=294.71 Aligned_cols=243 Identities=26% Similarity=0.407 Sum_probs=194.9
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||.|+||.||+|.+..++. .+++|.+...... ..+.+.+|+.+++.++||||+++++++.+... .++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv 71 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNR-----TFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKY----IYML 71 (262)
T ss_pred CCCCCceEEEEEEECCCCc-----EEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCc----cEEE
Confidence 6999999999999876544 4999998754332 34568899999999999999999999876654 4999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++++|.+++... ..+++..+..++.||+.||.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 72 MEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred EecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 9999999999999763 5689999999999999999999998 9999999999999999999999999999865443
Q ss_pred CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
. ......|++.|++||.+.+..++.++|+||||+++|+|++|..||....... ........ ..
T Consensus 147 ~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~-------------~~ 209 (262)
T cd05572 147 Q---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-MEIYNDIL-------------KG 209 (262)
T ss_pred c---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-HHHHHHHh-------------cc
Confidence 2 2234578999999999988889999999999999999999999997554211 11111110 00
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCC-----HHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPK-----MSEVVE 378 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 378 (441)
.....++...+..+.+++.+||+.+|++||+ +.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 210 NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0111222334678999999999999999999 666665
No 328
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.8e-38 Score=293.33 Aligned_cols=254 Identities=28% Similarity=0.432 Sum_probs=204.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|...+.||+|++|.||+|....++. .|++|++..... .....+.+|+.++++++||||+++++.+.... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~ 73 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGE-----LMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE--K 73 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCc-----EEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC--C
Confidence 47788899999999999999876554 399998876543 34567889999999999999999999998763 1
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
...++||||+++++|.+++... ..+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 74 NTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred CeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 2459999999999999999764 4899999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
................++..|+|||.+.+..++.++||||||+++++|++|..||...... .......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~---------- 216 (260)
T cd06606 149 KRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP--MAALYKI---------- 216 (260)
T ss_pred EecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHhc----------
Confidence 8765443211133467899999999998888999999999999999999999999765411 1111100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.........+...+..+.+++.+||..+|++||++.+++.
T Consensus 217 ---~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 217 ---GSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---cccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0011112233345788999999999999999999999986
No 329
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=7.1e-38 Score=303.12 Aligned_cols=272 Identities=22% Similarity=0.324 Sum_probs=196.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC---chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG---LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
+|.+.+.||+|+||.||+|.....+ ....||+|.+.... ......+.+|+.++..++||||+++++++......
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGK---DGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCC---CCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc
Confidence 4788889999999999999987620 12349999988733 23345677899999999999999999999876322
Q ss_pred CeeEEEEEeccCCCChHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC----CCcE
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSR---FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE----QWNA 247 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~----~~~~ 247 (441)
..++||||+++ +|.+++... ....+++..++.++.||+.||.|||+. +|+||||||+|||++. ++.+
T Consensus 78 --~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 78 --SVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred --eEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceE
Confidence 46999999964 777766432 123789999999999999999999998 9999999999999999 9999
Q ss_pred EEeecCCCCCCCCCCC-cceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhH-------
Q 013504 248 KLSDFGLARLGPSDGL-SHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSE------- 318 (441)
Q Consensus 248 kl~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~------- 318 (441)
||+|||+++....... ........+|+.|+|||++.+ ..++.++|||||||++++|++|..||........
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
T cd07842 152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQR 231 (316)
T ss_pred EECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHH
Confidence 9999999986543322 112234578999999998766 4578999999999999999999999975543220
Q ss_pred HHH---HHhhhh-------hcccccchhhh---c-CCCCC-Cc----chH--HHHHHHHHHHHHhhcccCCCCCCHHHHH
Q 013504 319 QKL---LEWVRP-------HLTDAKKFTMI---L-DPKLE-GK----YSI--KLAQKLAAVANKCLARQAKGRPKMSEVV 377 (441)
Q Consensus 319 ~~~---~~~~~~-------~~~~~~~~~~~---~-~~~~~-~~----~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl 377 (441)
..+ +..+.. ........... . ..... .. ... ..+..+.+++.+||+.||++||++.+++
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil 311 (316)
T cd07842 232 DQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEAL 311 (316)
T ss_pred HHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 000 000000 00000000000 0 00000 00 000 2345788999999999999999999998
Q ss_pred H
Q 013504 378 E 378 (441)
Q Consensus 378 ~ 378 (441)
.
T Consensus 312 ~ 312 (316)
T cd07842 312 E 312 (316)
T ss_pred c
Confidence 5
No 330
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.9e-38 Score=301.44 Aligned_cols=267 Identities=24% Similarity=0.332 Sum_probs=197.0
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
++|++.+.||+|++|.||+|.+..++. .|++|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNE-----TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-- 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCc-----EEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC--
Confidence 478899999999999999999876654 399998865432 22356788999999999999999999998665
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC-CCcEEEeecC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAKLSDFG 253 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFG 253 (441)
..++||||++ ++|.+++.......+++..+..++.||+.||.|||++ +|+||||+|+||+++. ++.+||+|||
T Consensus 75 --~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 75 --RLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred --eEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 4599999995 5888888665445578889999999999999999998 9999999999999985 5679999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhhccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPHLTD 331 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~ 331 (441)
++....... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.......... ...........
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 226 (294)
T PLN00009 149 LARAFGIPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEE 226 (294)
T ss_pred cccccCCCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 997543321 11233567899999998866 457889999999999999999999997654322211 11110000000
Q ss_pred -------ccchhhhcC---CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 -------AKKFTMILD---PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 -------~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
......... +..........++.+.+++.+||..+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 227 TWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 00000011234567899999999999999999999997
No 331
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=301.18 Aligned_cols=242 Identities=27% Similarity=0.457 Sum_probs=204.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
.+|..+.+||+|+||.|.+|..+++.+. +|||++++..... .+--+.|-++|... +-|.+++++.+|+..+
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdEL-----yAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDEL-----YAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchh-----hhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 5788899999999999999999988876 9999998765432 23345788888887 6789999999998887
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
. +|+||||+.||+|.-++++ -+.+.+..+..++.+|+.||-+||++ |||+||||.+||||+.+|.+||+||
T Consensus 424 R----LyFVMEyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 424 R----LYFVMEYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred h----eeeEEEEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeec
Confidence 5 4999999999999999987 46888999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
|+++.....+ ....+++|||.|+|||++...+|+..+|+|||||+||||+.|++||++.... .+.+.+
T Consensus 495 GmcKEni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~---elF~aI------- 562 (683)
T KOG0696|consen 495 GMCKENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQAI------- 562 (683)
T ss_pred ccccccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH-------
Confidence 9999755443 3456799999999999999999999999999999999999999999875433 222222
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK 372 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 372 (441)
.+. ...++..++.+..+++...|.+.|.+|..
T Consensus 563 ------~eh--nvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 563 ------MEH--NVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ------HHc--cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 111 12456678889999999999999999954
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.9e-38 Score=303.16 Aligned_cols=269 Identities=26% Similarity=0.317 Sum_probs=198.9
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.++|++.+.||+|+||.||+|.+..++.. ||+|.+...... ....+.+|+.++++++|+||+++++++.....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEI-----VALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHL 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcE-----EEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCC
Confidence 46899999999999999999998776553 899988644322 12345689999999999999999999876542
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. ..++||||+. ++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 81 ~--~~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 81 D--SIFLVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred C--eEEEEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 2 4599999996 5888888653 36789999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH-Hhhhhhccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTD 331 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~~~~~ 331 (441)
++........ ......+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...........+ .........
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07845 154 LARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNES 231 (309)
T ss_pred eeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 9986543221 1223356888999998865 45789999999999999999999999765443322211 111000000
Q ss_pred c-------cchhhh-cC-CCCC--CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 A-------KKFTMI-LD-PKLE--GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~-------~~~~~~-~~-~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ...... .. .... .......++.+.++|.+||+.||++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 232 IWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 000000 00 0000 0000124667889999999999999999999997
No 333
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.8e-38 Score=301.44 Aligned_cols=244 Identities=27% Similarity=0.421 Sum_probs=196.3
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
..||+|+||.||++....++. .|++|++..........+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~ 96 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGK-----LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD----ELWVVM 96 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCe-----EEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC----EEEEEE
Confidence 469999999999999876655 39999886554445567889999999999999999999998765 359999
Q ss_pred eccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCC
Q 013504 183 EYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDG 262 (441)
Q Consensus 183 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 262 (441)
||+++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 97 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 99999999998754 4689999999999999999999998 99999999999999999999999999987543321
Q ss_pred CcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCC
Q 013504 263 LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPK 342 (441)
Q Consensus 263 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (441)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||............ ..... +.
T Consensus 171 --~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~---~~~~~----------~~ 235 (292)
T cd06657 171 --PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLP----------PK 235 (292)
T ss_pred --ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhhCC----------cc
Confidence 1223457899999999998888999999999999999999999999754332221111 11110 11
Q ss_pred CCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 343 LEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 343 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+. ....++..+.+++.+||..+|.+||++.+++.
T Consensus 236 ~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 236 LK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred cC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 10 01134567889999999999999999999998
No 334
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.5e-38 Score=292.76 Aligned_cols=250 Identities=26% Similarity=0.433 Sum_probs=204.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|.+.+.||+|+||.||++.+..++. .+++|.+..... .....+.+|+++++.++|||++++++.+....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--- 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGK-----LYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG--- 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCc-----EEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC---
Confidence 57888999999999999999876544 499999876543 34567889999999999999999999987764
Q ss_pred eeEEEEEeccCCCChHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRF--QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++++|.+++.... ...+++..+..++.+++.||.|||+. +++|+||+|+||+++.++.++|+|||
T Consensus 73 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~ 148 (258)
T cd08215 73 -KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFG 148 (258)
T ss_pred -EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCcc
Confidence 4599999999999999997643 47899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
++....... .......|++.|+|||.+.+..++.++||||||+++++|++|..||....... .......
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~~~~~~~------ 217 (258)
T cd08215 149 ISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE---LALKILK------ 217 (258)
T ss_pred ceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH---HHHHHhc------
Confidence 998654432 23344678999999999988889999999999999999999999996543221 1111100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.. ....+..++..+.+++.+||..+|++||++.++++
T Consensus 218 -------~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 218 -------GQ-YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -------CC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 01122245677899999999999999999999986
No 335
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.1e-37 Score=302.37 Aligned_cols=250 Identities=30% Similarity=0.441 Sum_probs=197.2
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.|...+.||+|+||.||+|.+..++. .+|+|.+..... .....+.+|+.+++.++|||++++++++.....
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~-----~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~- 99 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNE-----VVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT- 99 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCc-----EEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe-
Confidence 47778889999999999999876654 399998865432 223568889999999999999999999987653
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++||||++ |+|.+.+... ...+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||+
T Consensus 100 ---~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 100 ---AWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred ---EEEEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 499999996 5787777543 45789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
+..... .....|++.|+|||++. .+.++.++|||||||++|+|++|..||.......... .+....
T Consensus 172 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~--~~~~~~--- 240 (317)
T cd06635 172 ASIASP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQNE--- 240 (317)
T ss_pred ccccCC------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHhcc---
Confidence 875432 22357889999999874 4568899999999999999999999986543221111 111000
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
........++..+.+++.+||+.+|.+||++.++++.+...
T Consensus 241 -----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 241 -----------SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred -----------CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence 00111224566789999999999999999999999865543
No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-37 Score=303.56 Aligned_cols=268 Identities=22% Similarity=0.288 Sum_probs=196.5
Q ss_pred eeecc--cceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 104 MIGEG--GFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 104 ~LG~G--~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
.||+| +||+||++.+..++.. ||+|.+..... ...+.+.+|+.+++.++||||++++++|...+. .+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~----~~ 75 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTL-----VTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSW----LW 75 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcE-----EEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCc----eE
Confidence 46666 9999999998766554 99999875432 234667889999999999999999999987653 49
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+||||+.+++|.+++.......+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++++|||.+....
T Consensus 76 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 76 VISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 999999999999999875556789999999999999999999988 99999999999999999999999998654322
Q ss_pred CCCCcc-----eeeceecccCcCCccccccC--CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc-c
Q 013504 260 SDGLSH-----VSTAVVGTIGYAAPEYIQTG--RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT-D 331 (441)
Q Consensus 260 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~-~ 331 (441)
...... ......++..|+|||++.+. .++.++|||||||++|+|++|..||........ .......... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~ 230 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSP 230 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCC
Confidence 111000 01112356679999998763 478899999999999999999999975432211 1111100000 0
Q ss_pred --------c-----------------cc-----hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--H
Q 013504 332 --------A-----------------KK-----FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--V 379 (441)
Q Consensus 332 --------~-----------------~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~ 379 (441)
. .. ........+.......++..+.+|+.+||+.||++|||+.++++ +
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0 00 00011111222233457788999999999999999999999987 5
Q ss_pred HHHHHh
Q 013504 380 LNKIVD 385 (441)
Q Consensus 380 L~~~~~ 385 (441)
+..+.+
T Consensus 311 ~~~~~~ 316 (328)
T cd08226 311 FKQVKE 316 (328)
T ss_pred HHHHHH
Confidence 555544
No 337
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.7e-37 Score=290.39 Aligned_cols=248 Identities=31% Similarity=0.485 Sum_probs=202.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|++|.||+|.....+. .+++|.+..... .....+.+|++++++++|||++++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGD-----FVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD--- 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCc-----EEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC---
Confidence 47888999999999999999876654 399999877654 34567889999999999999999999987654
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 73 -~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 73 -SLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred -EEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 359999999999999999763 6799999999999999999999988 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
........ ......++..|+|||.+.+..++.++|||+||+++++|++|..||........ ..... .
T Consensus 147 ~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~--~~~~~-~-------- 213 (254)
T cd06627 147 TKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA--LFRIV-Q-------- 213 (254)
T ss_pred eecCCCcc--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHh-c--------
Confidence 86544321 12345789999999999888889999999999999999999999965432111 11100 0
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
......+...+..+.+++.+||..+|++||++.+++.
T Consensus 214 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 214 ------DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ------cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0011122345678899999999999999999999875
No 338
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.2e-37 Score=293.05 Aligned_cols=244 Identities=27% Similarity=0.351 Sum_probs=188.9
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHh-ccCCCCCeeeEEeEEeccccCCeeE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVL-GVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il-~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+.||.|+||.||+|....++. .||+|.+....... ...+..|..++ ...+||||+++++++...+ ..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~----~~ 72 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGD-----YFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD----YL 72 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCC-----eEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC----eE
Confidence 468999999999999876654 39999987543221 23344555544 4458999999999998665 35
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||+++..
T Consensus 73 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 73 YLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEEeccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 999999999999999976 35789999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 259 PSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 259 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
.. .....|+..|++||.+.+..++.++||||||+++|+|++|..||................
T Consensus 148 ~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------ 209 (260)
T cd05611 148 LE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR------------ 209 (260)
T ss_pred cc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc------------
Confidence 32 233568899999999988888999999999999999999999996544322111111000
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
..........++..+.+++.+||..+|++||++.++.+.|
T Consensus 210 --~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 210 --INWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred --cCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0001111224567899999999999999999876555543
No 339
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.9e-37 Score=292.14 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=193.1
Q ss_pred HHHHHHhcCCccccee--ecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEe
Q 013504 90 SELKTATKNFSRSLMI--GEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIG 166 (441)
Q Consensus 90 ~~~~~~~~~f~~~~~L--G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~ 166 (441)
.+.....++|.+.+.+ |+|+||.||++....++.. +++|.+....... .|+.+...+ +||||+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~-----~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~ 76 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKL-----FVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYY 76 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcE-----EEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEE
Confidence 3445556778887777 9999999999998776543 8888876543221 123222222 7999999999
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC-
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW- 245 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~- 245 (441)
++...+ ..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus 77 ~~~~~~----~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~ 147 (267)
T PHA03390 77 SVTTLK----GHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKD 147 (267)
T ss_pred EEecCC----eeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCC
Confidence 998766 359999999999999999763 4899999999999999999999998 999999999999999988
Q ss_pred cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
.++|+|||+++..... ....|+..|+|||++.+..++.++||||||+++|+|++|..||........ ....+.
T Consensus 148 ~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~ 220 (267)
T PHA03390 148 RIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL-DLESLL 220 (267)
T ss_pred eEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh-hHHHHH
Confidence 9999999998764322 234689999999999988999999999999999999999999974432211 111111
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC-HHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK-MSEVVE 378 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 378 (441)
... ... ......++..+.+++.+||+.+|.+||+ ++++++
T Consensus 221 ~~~-----------~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 221 KRQ-----------QKK--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred Hhh-----------ccc--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 100 000 0112246678999999999999999996 588874
No 340
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.9e-37 Score=298.38 Aligned_cols=273 Identities=25% Similarity=0.334 Sum_probs=201.2
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|++.+.||+|+||.||+|.+..++. .|++|.+..... .....+.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGE-----LVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCc-----EEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 456789999999999999999999876654 389998865432 2234567899999999999999999998765
Q ss_pred cc------CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 172 DE------RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 172 ~~------~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
.. .....++||||+++ +|...+... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~ 153 (302)
T cd07864 79 QDALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKG 153 (302)
T ss_pred chhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 41 11246999999975 777777653 35789999999999999999999998 999999999999999999
Q ss_pred cEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHh
Q 013504 246 NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~ 324 (441)
.+||+|||++........ .......++..|+|||++.+ ..++.++|||||||++++|++|+.||...........+..
T Consensus 154 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 154 QIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred cEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 999999999986543321 11223456888999998765 3578899999999999999999999976544333222222
Q ss_pred hhhhcccccchhhh--------cCCCC--C---CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 325 VRPHLTDAKKFTMI--------LDPKL--E---GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 325 ~~~~~~~~~~~~~~--------~~~~~--~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
....... ..+..+ .++.. . ......++..+.+++.+||..+|.+||++.+++.
T Consensus 233 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 233 LCGSPCP-AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HhCCCCh-hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1100000 000000 00000 0 0001124678999999999999999999999885
No 341
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-37 Score=291.60 Aligned_cols=248 Identities=27% Similarity=0.428 Sum_probs=201.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|++.+.||+|+||.||++....++. .+++|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQ-----FYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGN--- 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCC-----EEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC---
Confidence 47888999999999999998876654 389998875432 23456778999999999999999999987764
Q ss_pred eeEEEEEeccCCCChHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSR--FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+++++|.+++... ....+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 73 -~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 73 -KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred -EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeecc
Confidence 459999999999999998652 235689999999999999999999988 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+++..... ......+++.|+|||.+.+..++.++|+||||+++|+|++|+.||........... ...
T Consensus 149 ~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~---~~~------ 215 (256)
T cd08530 149 ISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYK---VQR------ 215 (256)
T ss_pred chhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---Hhc------
Confidence 99876543 12235688999999999998899999999999999999999999975543211111 100
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
......+..++.++.+++.+||..+|++||++.++++
T Consensus 216 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 216 --------GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --------CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0011222356778999999999999999999999986
No 342
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.1e-37 Score=297.20 Aligned_cols=267 Identities=25% Similarity=0.346 Sum_probs=198.3
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
|++.+.||.|+||.||+|....++. .+++|.+.... ......+.+|+.+++.++|||++++++++.... ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--~~ 73 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGE-----LVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG--KG 73 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCe-----EEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC--CC
Confidence 6678899999999999999877654 49999988653 223456788999999999999999999998762 12
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||++ ++|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 74 SIYMVFEYMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred cEEEEecccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 4599999997 4898888654 25789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc---
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA--- 332 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--- 332 (441)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+..........
T Consensus 149 ~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 149 PYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred eccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 6544321 11233467889999998765 457899999999999999999999997655332222111110000000
Q ss_pred --cch--hhhc------CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 --KKF--TMIL------DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 --~~~--~~~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
... .... ...+...+...++..+.+++.+||..+|.+||+++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 0000 000000011113678899999999999999999999986
No 343
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.7e-37 Score=294.06 Aligned_cols=242 Identities=26% Similarity=0.394 Sum_probs=186.9
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHH---HhccCCCCCeeeEEeEEeccccCCee
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVN---VLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~---il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
+||+|+||.||+|.+..++. .||+|.+....... ...+..|.. +++...||||+.+++++...+ .
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~ 71 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD----K 71 (278)
T ss_pred CcccCCCeEEEEEEEecCCC-----EEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC----E
Confidence 48999999999998876554 39999887643221 122334433 444568999999999988765 3
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.++||||++||+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 72 ~~~v~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 72 LSFILDLMNGGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 5999999999999998865 46799999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
.... ......|+..|+|||++.++ .++.++||||+||++|+|++|..||................
T Consensus 147 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------- 212 (278)
T cd05606 147 FSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---------- 212 (278)
T ss_pred cCcc----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh----------
Confidence 4322 12345789999999998754 68999999999999999999999997553222211111000
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
... ...+..++..+.+++.+||..+|.+|| ++.++++
T Consensus 213 -~~~----~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 213 -TMA----VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -ccC----CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 001 112223467899999999999999999 8888875
No 344
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.2e-37 Score=303.64 Aligned_cols=278 Identities=26% Similarity=0.327 Sum_probs=207.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccc-cC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD-ER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~~ 174 (441)
+|.+.+.||.|+||.||+|....++. .+++|.+.... ....+.+.+|+.+++.++||||+++++++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGR-----KVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPED 75 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCc-----EEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccc
Confidence 47888999999999999999876554 39999887643 233467889999999999999999999987765 12
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
....|+||||++ ++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.++|+|||+
T Consensus 76 ~~~~~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~ 149 (330)
T cd07834 76 FNDVYIVTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGL 149 (330)
T ss_pred ccceEEEecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCc
Confidence 224699999996 589998865 34899999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCC-cceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHh-hhhhccc
Q 013504 255 ARLGPSDGL-SHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW-VRPHLTD 331 (441)
Q Consensus 255 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~-~~~~~~~ 331 (441)
+........ ........+|+.|+|||++.+. .++.++||||||+++|+|++|..||...........+.. .......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 150 ARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE 229 (330)
T ss_pred eEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChh
Confidence 986544321 0112345689999999999887 789999999999999999999999976553322211110 0000000
Q ss_pred ------ccchhhh---cCCCCC---CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHhh
Q 013504 332 ------AKKFTMI---LDPKLE---GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVDA 386 (441)
Q Consensus 332 ------~~~~~~~---~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~ 386 (441)
....... ...... .......+..+.+++.+||+.+|.+||++.+++. +++.+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0000000 000000 0011225678899999999999999999999998 57766543
No 345
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-37 Score=300.12 Aligned_cols=273 Identities=25% Similarity=0.320 Sum_probs=198.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.++|.+.+.||+|+||.||+|.+..++.. +++|.+...... ....+.+|+.+++.++||||+++++++.....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRV-----VALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD 81 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcE-----EEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence 47899999999999999999998776553 899987654322 12456789999999999999999998765442
Q ss_pred C----CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 174 R----GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 174 ~----~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
. ....++||||+. ++|...+... ...+++..+..++.|++.||.|||+. +|+|+||||+|||+++++.++|
T Consensus 82 ~~~~~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l 156 (311)
T cd07866 82 KSKRKRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKI 156 (311)
T ss_pred cccccCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 2 234689999995 4777777543 45799999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCc---------ceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHH
Q 013504 250 SDFGLARLGPSDGLS---------HVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ 319 (441)
Q Consensus 250 ~DFGla~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~ 319 (441)
+|||+++........ .......|++.|+|||.+.+. .++.++|||||||++|||++|+.||.........
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999864332211 112345778999999987654 5789999999999999999999999765443322
Q ss_pred HHHHhhhhhccc-c----cchhh----hcCCCCCCcch---HHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 320 KLLEWVRPHLTD-A----KKFTM----ILDPKLEGKYS---IKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 320 ~~~~~~~~~~~~-~----~~~~~----~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+........+ . ..... ........... ......+.+++.+||..+|.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 221111000000 0 00000 00000000000 123367889999999999999999999875
No 346
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.1e-38 Score=294.28 Aligned_cols=247 Identities=27% Similarity=0.427 Sum_probs=194.8
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||.|+||.||++++..++. .+++|.+..... .....+.+|+.++++++||||+++++.+.... ..|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----~~~lv 71 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGD-----IYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK----NLYLV 71 (265)
T ss_pred CCCCCceEEEEEEECCCCC-----EEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc----EEEEE
Confidence 6899999999999876654 399999876543 23456888999999999999999998887654 45999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++++|.+++... ..+++..++.++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 72 MEYLPGGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred EecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999999999763 4789999999999999999999998 9999999999999999999999999998864433
Q ss_pred CC------cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccch
Q 013504 262 GL------SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKF 335 (441)
Q Consensus 262 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (441)
.. ........++..|++||.+....++.++||||||+++|+|++|..||......... .....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~---~~~~~-------- 215 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF---QNILN-------- 215 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHhc--------
Confidence 21 11233457888999999998888999999999999999999999999755432211 11100
Q ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 336 TMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
...........+..+.+++.+||+.+|.+||++..+.+.|+
T Consensus 216 -----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 216 -----GKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -----CCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00000001113678899999999999999999966555443
No 347
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=296.97 Aligned_cols=268 Identities=28% Similarity=0.400 Sum_probs=206.6
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhcc--CCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV--VEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~ 171 (441)
....+....+.||+|.||+||+|.|++.. ||||++..++ ...+.+|.+|... |+|+||+.+++.-..+
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wrGe~-------VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~ 277 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWRGED-------VAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKD 277 (513)
T ss_pred hhhheeEEEEEecCccccceeeccccCCc-------eEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccC
Confidence 45567888899999999999999999865 9999998765 3456677777665 6999999999887666
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEecccCCCcEEEcCCCc
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEG-----MDFQIIFRDFKSSNILLDEQWN 246 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~iiHrDlKp~NILl~~~~~ 246 (441)
...-.+++||++|.+.|+|+|||.. ..++....++++..++.||++||.. .++.|.|||||..|||+..++.
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 6666788999999999999999986 6899999999999999999999963 4678999999999999999999
Q ss_pred EEEeecCCCCCCCCC--CCcceeeceecccCcCCccccccCC----C--CccccchhHHHHHHHHHhC----------CC
Q 013504 247 AKLSDFGLARLGPSD--GLSHVSTAVVGTIGYAAPEYIQTGR----L--TYKSDIWSFGVFLYELITG----------RR 308 (441)
Q Consensus 247 ~kl~DFGla~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwSlG~il~elltG----------~~ 308 (441)
+.|+|+|||...... ......+..+||.+|||||++...- + -..+||||||+++||+... +.
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 999999999765433 2233445689999999999986532 1 2358999999999999862 24
Q ss_pred CCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcc-----hHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHH
Q 013504 309 PLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY-----SIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKI 383 (441)
Q Consensus 309 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 383 (441)
||.+..+.+... ......+...++++.. ..+....+.++++.||..+|.-|.|+=.|-+.|.++
T Consensus 435 Pyyd~Vp~DPs~-----------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 435 PYYDVVPSDPSF-----------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred CcccCCCCCCCH-----------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 664332221110 0000001111111111 124566789999999999999999999999999888
Q ss_pred Hh
Q 013504 384 VD 385 (441)
Q Consensus 384 ~~ 385 (441)
.+
T Consensus 504 ~~ 505 (513)
T KOG2052|consen 504 SN 505 (513)
T ss_pred hc
Confidence 74
No 348
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=299.64 Aligned_cols=277 Identities=26% Similarity=0.376 Sum_probs=203.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhcc--CCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGV--VEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~hpnIv~l~~~~~~~~~~~ 175 (441)
.....++||+|+||.||+|.+.+. .||||++.... ...|..|-+|.+. ++|+||++++++-...+...
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~-------~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNR-------LVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred chhhHHHhhcCccceeehhhccCc-------eeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 345566799999999999998763 39999997643 4567777777665 58999999998876655445
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEecccCCCcEEEcCCCcEEE
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGM------DFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
...+||+||.+.|+|.+||+. ..++|....+|+..+++||+|||+.. +++|+|||||..||||..++.+.|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred cceeEEeeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 567999999999999999986 58999999999999999999999743 568999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccccCC-CC-----ccccchhHHHHHHHHHhCCCCCCCCCchhHH-HHH
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-LT-----YKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-KLL 322 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DvwSlG~il~elltG~~P~~~~~~~~~~-~~~ 322 (441)
+|||+|..+.........-..+||.+|||||++.+.- +. .+.||||+|.+||||++...-++.....+.+ -..
T Consensus 358 aDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 358 ADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred eccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 9999999876554444445589999999999997642 22 3589999999999999976544311110000 000
Q ss_pred HhhhhhcccccchhhhcCCCCCCcchH-----HHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYSI-----KLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
..+..+..-......++..+.+..++. ....-+.+.+..||..||+.|.|+.=+.+.+.++....
T Consensus 438 ~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred HHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 000000000001111111222222222 23456889999999999999999999999988886544
No 349
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.9e-37 Score=304.08 Aligned_cols=272 Identities=25% Similarity=0.342 Sum_probs=200.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.++|.....||+|+||.||+|++..++. .||+|.+..... .....+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGE-----KVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCc-----EEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence 4789999999999999999999876654 399998865322 223567889999999999999999999875432
Q ss_pred C--CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 174 R--GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 174 ~--~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
. ....++||||+. .+|..++ +..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~d 160 (342)
T cd07879 89 GDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILD 160 (342)
T ss_pred CCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEee
Confidence 1 124589999995 4777665 24689999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh--
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH-- 328 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~-- 328 (441)
||+++..... .....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+......
T Consensus 161 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 161 FGLARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred CCCCcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9999864322 233577899999999876 46889999999999999999999999765432221111111000
Q ss_pred ------cccc--cchhhhcCCCCCCcc---hHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHh
Q 013504 329 ------LTDA--KKFTMILDPKLEGKY---SIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVD 385 (441)
Q Consensus 329 ------~~~~--~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 385 (441)
..+. ............... ....+..+.+++.+||+.||.+||++.+++. +++...+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0000 000000000000000 1124567889999999999999999999995 5777654
No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.8e-37 Score=295.21 Aligned_cols=264 Identities=25% Similarity=0.324 Sum_probs=199.4
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
|.+.+.||.|++|.||+|....++. .+++|.+...... ....+.+|+.++++++||||+++++++...+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 71 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGE-----IVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG---- 71 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCc-----EEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC----
Confidence 5677889999999999999865554 3899988765433 3456788999999999999999999987664
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+++ +|.+++..+ ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||.+.
T Consensus 72 ~~~~v~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 72 DLYLVFEFMDT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred CEEEEEeccCC-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 35999999965 888888764 35789999999999999999999998 99999999999999999999999999987
Q ss_pred CCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH-Hhhhhhcccc-c
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL-EWVRPHLTDA-K 333 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~-~~~~~~~~~~-~ 333 (441)
...... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||............ .......... .
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd05118 147 SFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWP 224 (283)
T ss_pred ecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcc
Confidence 654432 122335688899999998776 7899999999999999999999999665433221111 1100000000 0
Q ss_pred chhh-------hc---CCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTM-------IL---DPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~-------~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.... .. +..........++..+.+++.+||..||.+||++++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 225 KFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000 00 000001122356788999999999999999999999985
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.3e-37 Score=291.70 Aligned_cols=268 Identities=24% Similarity=0.353 Sum_probs=197.3
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccC---CCCCeeeEEeEEecccc
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVV---EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~ 173 (441)
|++.+.||+|+||.||+|.+..++. .+|+|.+...... ....+.+|+.++.++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGR-----FVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCC-----EEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC
Confidence 6678899999999999999876543 4999998743322 123456788777665 69999999999987654
Q ss_pred -CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 174 -RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 174 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
.....+++|||++ ++|.+++.......+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+||
T Consensus 76 ~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~df 151 (287)
T cd07838 76 DRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADF 151 (287)
T ss_pred CCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEecc
Confidence 2223689999996 5899988765445699999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhhccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPHLTD 331 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~ 331 (441)
|++....... ......++..|+|||++.+..++.++|||||||++|+|++|..||.......... ...........
T Consensus 152 g~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 152 GLARIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEE 228 (287)
T ss_pred CcceeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChH
Confidence 9998654332 1223457889999999999899999999999999999999999997544322211 11111000000
Q ss_pred ccch-----hhhcCCCCC---CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 332 AKKF-----TMILDPKLE---GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 332 ~~~~-----~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.... ......... .......+..+.+++.+||+.||.+||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000 000000000 1112245677889999999999999999999885
No 352
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.5e-37 Score=300.12 Aligned_cols=272 Identities=21% Similarity=0.241 Sum_probs=195.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
+|.+.+.||+|+||.||++....... ...||+|.+..... ...+.+.+|+.+++++ +||||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSE---EETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCc---CceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc
Confidence 47888999999999999999876511 22499998864321 2245678899999999 599999999876543222
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
....+++|||+. ++|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 78 ~~~~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 78 FNELYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred CCcEEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 234588899985 689999865 46789999999999999999999998 999999999999999999999999999
Q ss_pred CCCCCCCCCc--ceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhh--
Q 013504 255 ARLGPSDGLS--HVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPH-- 328 (441)
Q Consensus 255 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~-- 328 (441)
++........ .......||+.|+|||.+.+ ..++.++|||||||++|+|++|..||.......... ........
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9865432211 11234578999999998765 468999999999999999999999997544221111 11100000
Q ss_pred -----ccc--ccchhhhcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 -----LTD--AKKFTMILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 -----~~~--~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.. .............. ......+..+.+++.+||+.||++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 00000000000000 011123567899999999999999999999987
No 353
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.7e-37 Score=300.16 Aligned_cols=269 Identities=22% Similarity=0.314 Sum_probs=200.5
Q ss_pred HHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEE
Q 013504 91 ELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYC 168 (441)
Q Consensus 91 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~ 168 (441)
++..++++|++.+.||.|+||.||+|....++.. ||+|.+..... ...+.+.+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~-----vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 78 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQN-----VAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIF 78 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCE-----EEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeE
Confidence 3445678999999999999999999998776654 99998764322 2345677899999999999999999998
Q ss_pred eccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEE
Q 013504 169 AEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAK 248 (441)
Q Consensus 169 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~k 248 (441)
..... ..++||||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||+|+|||++.++.++
T Consensus 79 ~~~~~---~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 79 ISPLE---DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred ecCCC---cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEE
Confidence 65432 358999999 6789888864 4688888999999999999999998 999999999999999999999
Q ss_pred EeecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHH-hhh
Q 013504 249 LSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE-WVR 326 (441)
Q Consensus 249 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~-~~~ 326 (441)
|+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...........+. ...
T Consensus 149 l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~ 223 (328)
T cd07856 149 ICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLG 223 (328)
T ss_pred eCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999998754321 233567889999998765 568999999999999999999999997554322211111 100
Q ss_pred hh-------cccccchhhhcCCCCCCcch-----HHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 327 PH-------LTDAKKFTMILDPKLEGKYS-----IKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 327 ~~-------~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. ...................+ ..++..+.+++.+||+.+|++||++.+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 224 TPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000000000000111 1245789999999999999999999998773
No 354
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1e-37 Score=305.93 Aligned_cols=274 Identities=19% Similarity=0.297 Sum_probs=200.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC-
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG- 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~- 175 (441)
.+|.+.+.||.|+||.||+|....++.. |++|.+........+.+.+|+.+++.++||||+++++++.......
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~-----v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKR-----VAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcE-----EEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence 6799999999999999999998776553 9999987766555677889999999999999999998776543211
Q ss_pred ---------eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc-CCC
Q 013504 176 ---------IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD-EQW 245 (441)
Q Consensus 176 ---------~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~-~~~ 245 (441)
...++||||++ ++|.+++.. ..+++..+..++.||+.||.|||+. +|+||||||+||+++ +++
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 14589999996 589888854 4689999999999999999999988 999999999999997 456
Q ss_pred cEEEeecCCCCCCCCCCCc-ceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHH
Q 013504 246 NAKLSDFGLARLGPSDGLS-HVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~ 323 (441)
.++|+|||+++........ .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||.............
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 7899999999764322111 11123467889999997654 567889999999999999999999997654433222111
Q ss_pred hhhhhccc--ccchh----h-h----cCCCCC-CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHH
Q 013504 324 WVRPHLTD--AKKFT----M-I----LDPKLE-GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNK 382 (441)
Q Consensus 324 ~~~~~~~~--~~~~~----~-~----~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~ 382 (441)
...+.... ..... . . ..+... .......+..+.+++.+||..||.+||++.+++. +++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 11000000 00000 0 0 000000 0011134567889999999999999999999996 4543
No 355
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5e-37 Score=297.19 Aligned_cols=262 Identities=23% Similarity=0.313 Sum_probs=191.2
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeE
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 178 (441)
+++.+|.|+++.||++ ..++. .||||++.... ......+.+|+.+++.++||||+++++++...+. .
T Consensus 6 i~~~~~~~~~v~~~~~--~~~~~-----~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~----~ 74 (314)
T cd08216 6 IGKCFEDLMIVHLAKH--KPTNT-----LVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE----L 74 (314)
T ss_pred hhHhhcCCceEEEEEe--cCCCC-----EEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCe----E
Confidence 3334455555544444 44333 49999987642 2345678899999999999999999999887653 4
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
+++|||+++|+|.+++.......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 75 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 75 YVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred EEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceee
Confidence 9999999999999999876566789999999999999999999998 9999999999999999999999999988754
Q ss_pred CCCCC-----cceeeceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc-
Q 013504 259 PSDGL-----SHVSTAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT- 330 (441)
Q Consensus 259 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~- 330 (441)
..... ........++..|+|||++.. ..++.++|||||||++|||++|..||........ ..+.......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~ 229 (314)
T cd08216 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPC 229 (314)
T ss_pred ccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCcc
Confidence 32211 111234567889999999876 3588999999999999999999999975432211 1111110000
Q ss_pred --ccc-------chhh----hcC----CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 --DAK-------KFTM----ILD----PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 --~~~-------~~~~----~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
... .... ..+ ..........++..+.+++.+||..||++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 230 LLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred ccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 0000 000 00112233356678999999999999999999999998
No 356
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.6e-37 Score=301.03 Aligned_cols=275 Identities=24% Similarity=0.319 Sum_probs=202.3
Q ss_pred chHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEE
Q 013504 88 TFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLI 165 (441)
Q Consensus 88 ~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~ 165 (441)
...++...+++|.+.+.||+|+||.||+|....++. .||+|++..... ...+.+.+|+.++++++||||++++
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~ 82 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGL-----RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCe-----EEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccccee
Confidence 344566778999999999999999999998766554 499998875322 2245677899999999999999999
Q ss_pred eEEeccccC--CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC
Q 013504 166 GYCAEDDER--GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE 243 (441)
Q Consensus 166 ~~~~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~ 243 (441)
+++...... ....|++++++ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.
T Consensus 83 ~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~ 155 (345)
T cd07877 83 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE 155 (345)
T ss_pred eeeeecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcC
Confidence 988654321 12357888887 8899888864 4689999999999999999999998 9999999999999999
Q ss_pred CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-
Q 013504 244 QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL- 321 (441)
Q Consensus 244 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~- 321 (441)
++.+||+|||+++..... .....||..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........
T Consensus 156 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~ 230 (345)
T cd07877 156 DCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 230 (345)
T ss_pred CCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999999999998864321 234578999999998766 5688899999999999999999999965433221111
Q ss_pred HHhhh-------hhccccc--chhhhcCCCCCCcc---hHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 322 LEWVR-------PHLTDAK--KFTMILDPKLEGKY---SIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 322 ~~~~~-------~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..... ..+.... .....+.......+ ....+..+.+++.+||+.||.+||++.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11100 0000000 00000000000000 01235678899999999999999999999983
No 357
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=292.27 Aligned_cols=267 Identities=21% Similarity=0.308 Sum_probs=207.5
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-C-C----CeeeEEe
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-H-P----NLVKLIG 166 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h-p----nIv~l~~ 166 (441)
...+++|.+...+|+|+||.|..+.++.++. .||||+++.-. ...+..+-|+++|.++. + | -+|.+.+
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~-----~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKE-----HVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCc-----eehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 3457899999999999999999999887744 49999986543 22355677999999993 2 2 4667777
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC---
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE--- 243 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~--- 243 (441)
||...+.. |||+|.+ |-+++++|..+.-.+++...+..|++|++.++.|||+. +++|.||||+|||+.+
T Consensus 159 wFdyrghi----Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 159 WFDYRGHI----CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEY 230 (415)
T ss_pred hhhccCce----EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccce
Confidence 78766644 9999998 77999999987778999999999999999999999998 9999999999999931
Q ss_pred -----------------CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhC
Q 013504 244 -----------------QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITG 306 (441)
Q Consensus 244 -----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG 306 (441)
+..++|+|||.|++.... .+..+.|..|.|||++.+-+++..+||||+||||+|++||
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG 305 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTG 305 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeecc
Confidence 345999999999875443 3568899999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHHHhhhhhcccc------------------------cchhhhcCCCCC----CcchHHHHHHHHHH
Q 013504 307 RRPLDRNRPKSEQKLLEWVRPHLTDA------------------------KKFTMILDPKLE----GKYSIKLAQKLAAV 358 (441)
Q Consensus 307 ~~P~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~----~~~~~~~~~~l~~l 358 (441)
..-|+.....+...+.+.+...++.. .+...+.++... ..........|.+|
T Consensus 306 ~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDL 385 (415)
T KOG0671|consen 306 ETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDL 385 (415)
T ss_pred ceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHH
Confidence 99998877665554444332221110 000111111111 01112345579999
Q ss_pred HHHhhcccCCCCCCHHHHHH
Q 013504 359 ANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 359 i~~cl~~dP~~RPs~~evl~ 378 (441)
+++||..||.+|+|+.|++.
T Consensus 386 l~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 386 LRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHccCccccccHHHHhc
Confidence 99999999999999999986
No 358
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.6e-37 Score=295.10 Aligned_cols=250 Identities=26% Similarity=0.432 Sum_probs=200.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCC-CCCeeeEEeEEeccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDD 172 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 172 (441)
++|.+.+.||+|+||.||+|....++. .|++|++..... .....+.+|+.++++++ ||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNK-----EYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCC-----EEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 478899999999999999999876554 389998865322 23456788999999998 999999999887655
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+||
T Consensus 76 ----~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 ----NLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred ----eEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 35999999999999999976 35799999999999999999999988 9999999999999999999999999
Q ss_pred CCCCCCCCCCCc------------------ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 013504 253 GLARLGPSDGLS------------------HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNR 314 (441)
Q Consensus 253 Gla~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~ 314 (441)
|++......... .......|+..|+|||.+....++.++||||||++++++++|..||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 998865432210 12234568899999999988889999999999999999999999997544
Q ss_pred chhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH----HHHHH
Q 013504 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM----SEVVE 378 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 378 (441)
.. ........ .....+..+++.+.+++.+||..+|.+||++ ++++.
T Consensus 227 ~~---~~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 227 EY---LTFQKILK---------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HH---HHHHHHHh---------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 21 11111110 0112223446778999999999999999999 66654
No 359
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.3e-37 Score=297.14 Aligned_cols=247 Identities=30% Similarity=0.433 Sum_probs=194.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
+.|...+.||+|+||.||+|....++. .+++|.+..... ....++.+|+.+++.++|||++++++++....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 88 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSE-----VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH- 88 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCc-----EEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-
Confidence 447777889999999999999876554 389998764322 23456788999999999999999999998765
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..++||||+. |+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||
T Consensus 89 ---~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 89 ---TAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred ---eeEEEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 3499999996 6888877543 35689999999999999999999988 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
++..... .....|++.|+|||.+. ...++.++|||||||++|+|++|..||.......... .......
T Consensus 161 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~~~- 231 (308)
T cd06634 161 SASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQNES- 231 (308)
T ss_pred cceeecC------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH--HHhhcCC-
Confidence 9876432 22356889999999874 3567889999999999999999999986543221111 1110000
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
+ ......++..+.+++.+||..+|++||++.+++..
T Consensus 232 ----------~---~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 232 ----------P---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ----------C---CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 0 01122456778999999999999999999999975
No 360
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=313.59 Aligned_cols=264 Identities=30% Similarity=0.434 Sum_probs=220.4
Q ss_pred hHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeE
Q 013504 89 FSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGY 167 (441)
Q Consensus 89 ~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 167 (441)
++.+..-+..|++...||.|.+|.||+++.+.++.. .|+|++.... ....++..|.++|+.. .|||++.++|+
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~-----aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~ 84 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQL-----AAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGA 84 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCce-----eeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEE
Confidence 333444567899999999999999999998877654 7788776543 3346677899999987 79999999998
Q ss_pred Eecccc-CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc
Q 013504 168 CAEDDE-RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN 246 (441)
Q Consensus 168 ~~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~ 246 (441)
+.-.+. .+.+++||||||.||+..|.++...+..+.|..+..|++.++.||.+||.+ .++|||||-.|||++.++.
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 865433 345789999999999999999887788999999999999999999999998 8999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCcceeeceecccCcCCccccccC-----CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH
Q 013504 247 AKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-----RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL 321 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~ 321 (441)
|||+|||++..+... .....+.+|||.|||||++... .|+..+|+||||++..||--|.+|+.+..+.-.
T Consensus 162 VKLvDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra--- 236 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA--- 236 (953)
T ss_pred EEEeeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---
Confidence 999999999876543 3456778999999999998653 477899999999999999999999976654221
Q ss_pred HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 322 LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+....+|...-..+..+.+++.++|..||.+|-+.||++.++++
T Consensus 237 ------------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ------------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 222334455555667889999999999999999999999999886
No 361
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.1e-37 Score=293.11 Aligned_cols=264 Identities=24% Similarity=0.324 Sum_probs=196.2
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCC-CCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~ 176 (441)
|.+.+.||+|+||.||+|....++. .|+||.+...... ......+|+..+++++ ||||+++++++...+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~---- 71 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGE-----LVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND---- 71 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCc-----EEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC----
Confidence 5678899999999999999876654 3899988654321 2234457999999998 999999999987754
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||+ +|+|.+++.......+++..+..++.|++.+|.|||++ +++|+||+|+||++++++.++|+|||++.
T Consensus 72 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 72 ELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred cEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 359999999 88999999765445789999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhhhhcc----
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLT---- 330 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~~~~~---- 330 (441)
...... ......++..|+|||++.. ..++.++|+||||+++++|++|+.||........... .........
T Consensus 148 ~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd07830 148 EIRSRP---PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWP 224 (283)
T ss_pred eccCCC---CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhh
Confidence 654322 1233568899999998754 4578999999999999999999999965543322111 111100000
Q ss_pred ccc----chhhhcCCCCC---CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAK----KFTMILDPKLE---GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~----~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
+.. .....+..... .......+..+.+++.+||+.+|++||++++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 225 EGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000 00000000000 0001112467999999999999999999999875
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.8e-37 Score=300.26 Aligned_cols=267 Identities=22% Similarity=0.313 Sum_probs=195.1
Q ss_pred cCCcc-cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--------------hHHHHHHHHHhccCCCCCe
Q 013504 97 KNFSR-SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--------------HKEWVTEVNVLGVVEHPNL 161 (441)
Q Consensus 97 ~~f~~-~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~il~~l~hpnI 161 (441)
++|.. .+.||.|+||.||+|.+..++. .||||.+....... ...+.+|+.+++.++||||
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 82 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGK-----IVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI 82 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCC-----eEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce
Confidence 45554 4679999999999999876554 49999886543221 1246789999999999999
Q ss_pred eeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE
Q 013504 162 VKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL 241 (441)
Q Consensus 162 v~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl 241 (441)
+++++++...+. .++||||++ |+|.+++.. ...+++.....++.|++.||.|||+. +|+|+||||+||++
T Consensus 83 v~~~~~~~~~~~----~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 83 MGLVDVYVEGDF----INLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred eeeeEEEecCCc----EEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 999999987653 599999996 699999865 35689999999999999999999988 99999999999999
Q ss_pred cCCCcEEEeecCCCCCCCCCC------------CcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCC
Q 013504 242 DEQWNAKLSDFGLARLGPSDG------------LSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRR 308 (441)
Q Consensus 242 ~~~~~~kl~DFGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~ 308 (441)
+.++.++|+|||+++...... .........+++.|+|||.+.+. .++.++|||||||++|+|++|..
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~ 232 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKP 232 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 999999999999997654111 01112234578899999998764 46889999999999999999999
Q ss_pred CCCCCCchhHHHHH-Hhhhhhccc----ccchh--hhcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 309 PLDRNRPKSEQKLL-EWVRPHLTD----AKKFT--MILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 309 P~~~~~~~~~~~~~-~~~~~~~~~----~~~~~--~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
||...........+ ......... ..... ......... ......+..+.+++.+||+.+|++||++.+++.
T Consensus 233 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 233 LFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 99765543222111 111000000 00000 000000000 001123567889999999999999999999997
No 363
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.9e-37 Score=300.66 Aligned_cols=273 Identities=25% Similarity=0.352 Sum_probs=202.3
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|.+.+.||+|+||.||+|....++. .||||.+..... .....+.+|+.+|+.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGA-----KVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPD 86 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCc-----EEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCC
Confidence 356789999999999999999999876654 399998864322 2235678999999999999999999998765
Q ss_pred ccCC--eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 172 DERG--IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 172 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
.... ...++||||+ +++|.+++.. ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.++|
T Consensus 87 ~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 87 LSLDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred ccccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 4321 2358999999 7899888864 5789999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRP 327 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~ 327 (441)
+|||++...... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||.......... .......
T Consensus 160 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07880 160 LDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGT 234 (343)
T ss_pred eecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 999999864332 223567899999998876 458889999999999999999999997544321111 1110000
Q ss_pred -------hccc--ccchhhhcCCCCC----CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHH
Q 013504 328 -------HLTD--AKKFTMILDPKLE----GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIV 384 (441)
Q Consensus 328 -------~~~~--~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 384 (441)
.+.. .......+ +... ......++..+.+++.+||+.||++||++.+++. +++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 235 PSKEFVQKLQSEDAKNYVKKL-PRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred CCHHHHHhhcchhHHHHHHhc-cccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 0000 00000000 0000 0011234567889999999999999999999995 555543
No 364
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.4e-36 Score=294.20 Aligned_cols=245 Identities=31% Similarity=0.446 Sum_probs=192.8
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
|...+.||+|+||.||+|+...++. .|++|.+..... .....+.+|+.+++.++|||++++++++.+...
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 95 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNE-----VVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHT-- 95 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCc-----EEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE--
Confidence 5666779999999999999866654 389998865432 223567889999999999999999999987653
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||+. |+|.+++... ...+++..++.++.|++.||.|||+. +|+|+||+|+||+++.++.++|+|||++
T Consensus 96 --~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 96 --AWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred --EEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 499999995 5788877643 35789999999999999999999998 9999999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQ---TGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
..... .....|+..|+|||++. ...++.++|||||||++|+|++|..||.............. ..
T Consensus 169 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~---- 236 (313)
T cd06633 169 SKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--ND---- 236 (313)
T ss_pred cccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cC----
Confidence 64322 23457899999999974 45688899999999999999999999965433221111100 00
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
........++..+.+++.+||+.+|.+||++.+++..
T Consensus 237 ----------~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 237 ----------SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ----------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001112345678899999999999999999999963
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.9e-37 Score=292.55 Aligned_cols=258 Identities=26% Similarity=0.357 Sum_probs=198.8
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc----hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL----QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
+|++.+.||+|+||.||++....... ....||||.+..... .....+.+|+.++.++ +||||+++++.+....
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHD--AGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEecccc--CCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC
Confidence 47888999999999999998654321 234599998865322 2235677899999999 6999999999887655
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+||
T Consensus 79 ----~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df 149 (288)
T cd05583 79 ----KLHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDF 149 (288)
T ss_pred ----EEEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEEC
Confidence 35899999999999999875 35789999999999999999999988 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCchh-HHHHHHhhhhhc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR--LTYKSDIWSFGVFLYELITGRRPLDRNRPKS-EQKLLEWVRPHL 329 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltG~~P~~~~~~~~-~~~~~~~~~~~~ 329 (441)
|+++....... .......|+..|+|||.+.+.. .+.++||||||+++|+|++|..||....... ..........
T Consensus 150 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-- 226 (288)
T cd05583 150 GLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-- 226 (288)
T ss_pred ccccccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--
Confidence 99886543321 1223456899999999987655 7889999999999999999999996432211 1111111100
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNK 382 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 382 (441)
.. ...+..++..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 227 ---------~~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 227 ---------SK----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ---------cC----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 00 11223355678999999999999999999888776654
No 366
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6e-37 Score=294.32 Aligned_cols=253 Identities=29% Similarity=0.477 Sum_probs=192.7
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
++|.+.+.||+|+||.||+|.+..++. .||||.+...... ....+..|+.++.++ .||||+++++++.+...
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~- 88 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGH-----VMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD- 88 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCe-----EEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe-
Confidence 678889999999999999999876554 4999998754332 335566788777666 59999999999987653
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.|+||||+. ++|.+++... ...+++..+..++.|++.||.|||+. .+|+||||+|+||+++.++.+||+|||+
T Consensus 89 ---~~~v~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~ 161 (296)
T cd06618 89 ---VFICMELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGI 161 (296)
T ss_pred ---EEEEeeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECcccc
Confidence 599999984 5777776543 35889999999999999999999973 2899999999999999999999999999
Q ss_pred CCCCCCCCCcceeeceecccCcCCccccccCC----CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 255 ARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR----LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 255 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
+....... ......++..|+|||++.+.. ++.++||||||+++|+|++|+.||...... ....... ..
T Consensus 162 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~---~~ 233 (296)
T cd06618 162 SGRLVDSK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKI---LQ 233 (296)
T ss_pred chhccCCC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHH---hc
Confidence 87643321 122345788999999987554 788999999999999999999999643211 1111111 00
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
... +.. .....++..+.+++.+||..||.+||++.+++..
T Consensus 234 ~~~-------~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 234 EEP-------PSL--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCC-------CCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 000 0011345678999999999999999999999874
No 367
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7e-37 Score=287.95 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=192.9
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccc---cCc--hhhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSR---RGL--QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
+|.+.+.||+|+||.||++.+...... +++|.++. ... .....+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAE-----ERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCc-----ceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC
Confidence 478889999999999999988765432 44444332 111 12345667999999999999999999987665
Q ss_pred cCCeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
. .++||||+++++|.+++.. .....+++..++.++.|++.||.|||+. +++|+||||+||+++. +.++|+
T Consensus 76 ~----~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~ 147 (260)
T cd08222 76 A----FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIG 147 (260)
T ss_pred c----eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeec
Confidence 3 4899999999999998864 2245789999999999999999999998 9999999999999975 569999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcc
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLT 330 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 330 (441)
|||+++...... .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||....... .......
T Consensus 148 d~g~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~---~~~~~~~--- 219 (260)
T cd08222 148 DFGVSRLLMGSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS---VVLRIVE--- 219 (260)
T ss_pred ccCceeecCCCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHHc---
Confidence 999987654322 12234568899999999988889999999999999999999999996433211 1111100
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
......+..++..+.+++.+||..+|++||++.++++
T Consensus 220 -----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 220 -----------GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -----------CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0011123456678999999999999999999999986
No 368
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=312.46 Aligned_cols=261 Identities=28% Similarity=0.452 Sum_probs=220.6
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
....++||+|+||+||+|.+...++ ..+++||||++..... +...++++|+.+|.+++|||+++|+|+|....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege-~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~----- 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGE-NVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST----- 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCc-eecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----
Confidence 4445689999999999999987744 4567799999876543 34678999999999999999999999998776
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
..||++|++.|+|.+|++.. ...+-....+.|..||++||.|||.+ .++||||..+|||+..-..+||.|||+++.
T Consensus 772 ~qlvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~l 847 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKL 847 (1177)
T ss_pred HHHHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhc
Confidence 36899999999999999864 46788899999999999999999988 999999999999999999999999999999
Q ss_pred CCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 258 GPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 258 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
...++.........-.+-|||-|.+....|+.++|||||||++||++| |..|+++....+..++++.-
T Consensus 848 l~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g----------- 916 (1177)
T KOG1025|consen 848 LAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG----------- 916 (1177)
T ss_pred cCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc-----------
Confidence 877765554555555678999999999999999999999999999999 99999876655444433311
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
.+-..++.++.++..++.+||..|+..||+++++...+..+...
T Consensus 917 ------eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 917 ------ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ------ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 12234556888999999999999999999999999999887653
No 369
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=280.65 Aligned_cols=284 Identities=24% Similarity=0.370 Sum_probs=212.6
Q ss_pred cchHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEE
Q 013504 87 FTFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLI 165 (441)
Q Consensus 87 ~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 165 (441)
-.|+++...|. ++||+|+|+.|--++...++.. +|||++.+.......++.+|++++..+ .|+||+.|+
T Consensus 73 g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~E-----YAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLi 142 (463)
T KOG0607|consen 73 GKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKE-----YAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLI 142 (463)
T ss_pred chHHHHHHhHH-----HHhcCccceeeeeeeeeccchh-----hhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 34667666665 4799999999999988777654 999999988666678899999999998 699999999
Q ss_pred eEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 166 GYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 166 ~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
+||.+++. +|||||-|.||+|..+|++ ...|++.++..+..+|+.||.|||.+ ||.||||||+|||-.+..
T Consensus 143 efFEdd~~----FYLVfEKm~GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn 213 (463)
T KOG0607|consen 143 EFFEDDTR----FYLVFEKMRGGPLLSHIQK--RKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPN 213 (463)
T ss_pred HHhcccce----EEEEEecccCchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCC
Confidence 99988774 5999999999999999987 46899999999999999999999998 999999999999997655
Q ss_pred c---EEEeecCCCCCCCCCC-----CcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCC
Q 013504 246 N---AKLSDFGLARLGPSDG-----LSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITGRRPLDR 312 (441)
Q Consensus 246 ~---~kl~DFGla~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG~~P~~~ 312 (441)
. +|||||.+..-..... ......+.+|+..|||||++. ...|+.++|.||||||+|-||+|.+||.+
T Consensus 214 ~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG 293 (463)
T KOG0607|consen 214 KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVG 293 (463)
T ss_pred CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 5 7999998865322111 111234578999999999763 24588999999999999999999999975
Q ss_pred CCchhHHHHHHhhhhhccc---ccchhhhcCCC--CCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH--HHHHHHh
Q 013504 313 NRPKSEQKLLEWVRPHLTD---AKKFTMILDPK--LEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE--VLNKIVD 385 (441)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~ 385 (441)
.-..+-. |-+...-. ...+..+-+.. +...-...++.+..+++..+|..|+.+|.++..++. +++....
T Consensus 294 ~Cg~dCG----WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 294 HCGADCG----WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred ccCCcCC----ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 4321110 00000000 00111111111 122233467888999999999999999999999988 4544444
Q ss_pred hhccCCCC
Q 013504 386 AAETGTPQ 393 (441)
Q Consensus 386 ~~~~~~p~ 393 (441)
....++|+
T Consensus 370 ekalptp~ 377 (463)
T KOG0607|consen 370 EKALPTPQ 377 (463)
T ss_pred hccCCCCc
Confidence 33333443
No 370
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-36 Score=290.47 Aligned_cols=254 Identities=27% Similarity=0.392 Sum_probs=194.3
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc----hhhHHHHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL----QGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
+|++.+.||.|+||.||++...... .....||+|.+..... ...+.+.+|+.++..+ +||||+++++++....
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~--~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGH--DSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCC--CCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence 4788899999999999999875321 1223599999875332 2235677899999999 6999999998887654
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+||
T Consensus 79 ----~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 149 (290)
T cd05613 79 ----KLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDF 149 (290)
T ss_pred ----eEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeC
Confidence 35899999999999999976 35788999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccC--CCCccccchhHHHHHHHHHhCCCCCCCCCchh-HHHHHHhhhhhc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG--RLTYKSDIWSFGVFLYELITGRRPLDRNRPKS-EQKLLEWVRPHL 329 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltG~~P~~~~~~~~-~~~~~~~~~~~~ 329 (441)
|+++....... .......|+..|+|||.+... .++.++||||||+++|+|++|..||....... ..........
T Consensus 150 g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-- 226 (290)
T cd05613 150 GLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK-- 226 (290)
T ss_pred ccceecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--
Confidence 99986533221 122345789999999998653 46789999999999999999999996432211 1111111100
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC-----CHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP-----KMSEVVE 378 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 378 (441)
. ...++..++..+.+++.+||..+|.+|| ++.+++.
T Consensus 227 ---------~----~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 227 ---------S----EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------c----CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 0112234567789999999999999997 5666655
No 371
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-38 Score=299.16 Aligned_cols=245 Identities=24% Similarity=0.403 Sum_probs=201.2
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
.++||+|-||+||-|+++.++.. ||||++.+..... ...+..|+.||..++||.||.+...|...+. .|
T Consensus 569 devLGSGQFG~VYgg~hRktGrd-----VAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er----vF 639 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRD-----VAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER----VF 639 (888)
T ss_pred HhhccCCcceeeecceecccCce-----eeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce----EE
Confidence 35899999999999999988875 9999998765433 3568899999999999999999999988775 49
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC---CcEEEeecCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ---WNAKLSDFGLAR 256 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~ 256 (441)
+|||-+ .|+..+.|-....+.+++.....++.||+.||.|||.+ +|+|+||||+||||... .++||||||+|+
T Consensus 640 VVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 640 VVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred EEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 999999 55666666555578999999999999999999999998 99999999999999644 569999999999
Q ss_pred CCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchh
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFT 336 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (441)
+.... ......+|||.|+|||+++...|...-|+||.|||+|--|+|..||...... .+.++...
T Consensus 716 iIgEk---sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--ndQIQNAa---------- 780 (888)
T KOG4236|consen 716 IIGEK---SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--NDQIQNAA---------- 780 (888)
T ss_pred ecchh---hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch--hHHhhccc----------
Confidence 87654 3456789999999999999999999999999999999999999999644321 11121111
Q ss_pred hhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 337 MILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
++-| .....+++....+||..+|+..-++|-+....+.
T Consensus 781 -FMyP---p~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 781 -FMYP---PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred -cccC---CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 1111 1223467788999999999999999999888766
No 372
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=292.08 Aligned_cols=259 Identities=25% Similarity=0.413 Sum_probs=202.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-ch------hhHHHHHHHHHhccCCCCCeeeEEeEEe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQ------GHKEWVTEVNVLGVVEHPNLVKLIGYCA 169 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~------~~~~~~~E~~il~~l~hpnIv~l~~~~~ 169 (441)
++|-...+||+|||+.||++.+...... ||||+-.... +. ..+...+|.+|.+.|.||.||++|+||.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRY-----vAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRY-----VAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhhe-----eeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee
Confidence 5688889999999999999987665544 8888754321 11 1245678999999999999999999998
Q ss_pred ccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc---CCCc
Q 013504 170 EDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD---EQWN 246 (441)
Q Consensus 170 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~---~~~~ 246 (441)
-+... +|-|+|||+|.+|.-||+. ...+++.++..|+.||+.||.||... +++|||-||||.||||- .-|.
T Consensus 538 lDtds---FCTVLEYceGNDLDFYLKQ--hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 538 LDTDS---FCTVLEYCEGNDLDFYLKQ--HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred ecccc---ceeeeeecCCCchhHHHHh--hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccce
Confidence 76654 5899999999999999977 57899999999999999999999986 78999999999999994 4578
Q ss_pred EEEeecCCCCCCCCCCCcc-----eeeceecccCcCCccccccC----CCCccccchhHHHHHHHHHhCCCCCCCCCchh
Q 013504 247 AKLSDFGLARLGPSDGLSH-----VSTAVVGTIGYAAPEYIQTG----RLTYKSDIWSFGVFLYELITGRRPLDRNRPKS 317 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~elltG~~P~~~~~~~~ 317 (441)
+||+|||+++....+.... ......||.+|++||++.-+ ..+.++||||+|||+|+++.|+.||+.+..
T Consensus 612 IKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-- 689 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-- 689 (775)
T ss_pred eEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--
Confidence 9999999999876554332 23457899999999987543 468899999999999999999999986543
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+++++.- ..+... .+.-..-+.++.+..++|++||++..++|....++..
T Consensus 690 QQdILqeN-TIlkAt---------EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 690 QQDILQEN-TILKAT---------EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HHHHHhhh-chhcce---------eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 23333221 111100 0011112245678899999999999999988877765
No 373
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=257.39 Aligned_cols=265 Identities=24% Similarity=0.340 Sum_probs=201.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+|...++||+|.||+||+|+.+.+.+. ||+|.++..... -....++|+.+|+.++|.|||+++++...+..
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~ei-----valkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkk-- 75 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEI-----VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK-- 75 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccce-----EEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCce--
Confidence 456667899999999999999888775 999998764432 23578899999999999999999999877664
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
+-+|+||| ..+|..+.... .+.++.+.+..++.|++.||.|+|+. ++.||||||+|.||+.||++||+|||++
T Consensus 76 --ltlvfe~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 76 --LTLVFEFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred --eEEeHHHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 58999999 56888888764 57899999999999999999999998 9999999999999999999999999999
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCC-CCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccc-
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-LTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDA- 332 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~- 332 (441)
+...-. -...+..+-|.+|.+|.++.+.. |+...|+||.|||+.|+.. |++-|.++...+....+-|......+.
T Consensus 149 rafgip--vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~ 226 (292)
T KOG0662|consen 149 RAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQ 226 (292)
T ss_pred hhcCCc--eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCcccc
Confidence 965432 22345567899999999998865 7889999999999999987 555566555444444443332222111
Q ss_pred -cchhhhcCCCCCCcchH---------HHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 -KKFTMILDPKLEGKYSI---------KLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 -~~~~~~~~~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+..+-|-.....++. .....=.+++.+.|.-+|..|.++++.++
T Consensus 227 wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 227 WPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 01111111111111111 22234568899999999999999988775
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.1e-37 Score=301.13 Aligned_cols=268 Identities=24% Similarity=0.318 Sum_probs=200.4
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEecc
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAED 171 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 171 (441)
...++|.+.+.||+|+||.||+|.+..++.. ||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRK-----VAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPA 86 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcE-----EEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcc
Confidence 3467899999999999999999998776543 9999886532 22335677899999999999999999877654
Q ss_pred cc--CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 172 DE--RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 172 ~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
+. .....++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|
T Consensus 87 ~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL 159 (343)
T cd07851 87 SSLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKI 159 (343)
T ss_pred ccccccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEE
Confidence 43 122368999999 6799999865 5799999999999999999999998 9999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhh
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPH 328 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~ 328 (441)
+|||++...... .....+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........+......
T Consensus 160 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~ 234 (343)
T cd07851 160 LDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGT 234 (343)
T ss_pred cccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Confidence 999999865332 234578899999998865 36788999999999999999999999755432221111100000
Q ss_pred ccc----------ccchhhhcCCCCCCcc---hHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 329 LTD----------AKKFTMILDPKLEGKY---SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 329 ~~~----------~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+ ...+...+.......+ ...++..+.+++.+||..+|++||++.+|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000 0000000000000001 1123678999999999999999999999987
No 375
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.1e-36 Score=287.73 Aligned_cols=264 Identities=26% Similarity=0.355 Sum_probs=198.0
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
|+....||+|+||.||+|+...++. .+++|.+.... ......+..|+.+++.++||||+++++++...+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---- 71 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGE-----IVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER---- 71 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCc-----EEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC----
Confidence 5667789999999999999877654 39999987653 223456778999999999999999999988764
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
..++||||++ ++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||+|+||++++++.++|+|||+++
T Consensus 72 ~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 72 KLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred ceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 3599999997 59999997642 4799999999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhh-------
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRP------- 327 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~------- 327 (441)
....... ......++..|+|||.+.+. .++.++|||||||+++||++|..||.......... .......
T Consensus 147 ~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (282)
T cd07829 147 AFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224 (282)
T ss_pred ccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHH
Confidence 6543321 22334567889999998776 78999999999999999999999996654322211 1111000
Q ss_pred hcccccchhhhcCCCCCC---cchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEG---KYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...+.............. ......+..+.+++.+||..+|++||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 225 GVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred hhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000000000000 001123567999999999999999999999885
No 376
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-39 Score=283.31 Aligned_cols=265 Identities=28% Similarity=0.431 Sum_probs=201.4
Q ss_pred CCccccchHHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccC-CCC
Q 013504 82 SNLRVFTFSELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVV-EHP 159 (441)
Q Consensus 82 ~~~~~~~~~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~hp 159 (441)
..+..|+-++++... .||.|+||+|++-.++..+.. +|||+++.... ...++++.|.+...+- +.|
T Consensus 56 ~~~~~F~~~~Lqdlg-------~iG~G~fG~V~KM~hk~sg~~-----mAVKrIr~~n~~keq~rll~e~d~~mks~~cp 123 (361)
T KOG1006|consen 56 AHLHTFTSDNLQDLG-------EIGNGAFGTVNKMLHKPSGKL-----MAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCP 123 (361)
T ss_pred ccccccccchHHHHH-------HhcCCcchhhhhhhcCccCcE-----EEEEEeeeccchHHHHHHHHHHHHHHhhcCCc
Confidence 344556655655544 499999999999998877764 99999987665 5567888898876665 899
Q ss_pred CeeeEEeEEeccccCCeeEEEEEeccCCCChHHHH---hhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCC
Q 013504 160 NLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHL---TSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKS 236 (441)
Q Consensus 160 nIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp 236 (441)
|||++||.+..++. +++.||+| ..+|..+. .......++++..-+|....+.||.||-.. ..||||||||
T Consensus 124 ~IVkfyGa~F~EGd----cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKP 196 (361)
T KOG1006|consen 124 NIVKFYGALFSEGD----CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKP 196 (361)
T ss_pred HHHHHhhhhhcCCc----eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCCh
Confidence 99999999877664 38999999 44665543 333456899999999999999999999976 5899999999
Q ss_pred CcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 013504 237 SNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT--GRLTYKSDIWSFGVFLYELITGRRPLDRNR 314 (441)
Q Consensus 237 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltG~~P~~~~~ 314 (441)
+||||+..|.+||||||++..+... ...+.-.|-..|||||.+.. ..|+.++||||||++|||+.||..|+....
T Consensus 197 SNILldr~G~vKLCDFGIcGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~ 273 (361)
T KOG1006|consen 197 SNILLDRHGDVKLCDFGICGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD 273 (361)
T ss_pred hheEEecCCCEeeecccchHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH
Confidence 9999999999999999999765432 22344578889999998854 458999999999999999999999997544
Q ss_pred chhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. .+.+...... ....+. ......+++..+..+|..||.+|..+||.+.++..+
T Consensus 274 sv-----feql~~Vv~g--dpp~l~----~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 274 SV-----FEQLCQVVIG--DPPILL----FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HH-----HHHHHHHHcC--CCCeec----CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 31 1111111111 000111 111223567889999999999999999999998874
No 377
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.9e-37 Score=280.27 Aligned_cols=209 Identities=26% Similarity=0.395 Sum_probs=171.4
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
...|+.+..||+|+||.||+|+..++... ..+.+|||+++..... --....+|+.+++.++||||+.|..+|...+.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~k-r~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDK-RTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcc-cchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 35799999999999999999987665442 2346999998765321 12456799999999999999999999887532
Q ss_pred CCeeEEEEEeccCCCChHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC----Cc
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSR---FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ----WN 246 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~----~~ 246 (441)
..++++||.+. +|.+.|+.. ....++...+..|+.||+.|+.|||++ =|+||||||.|||+..+ |.
T Consensus 102 ---~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~ 174 (438)
T KOG0666|consen 102 ---KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGR 174 (438)
T ss_pred ---eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCe
Confidence 46999999954 888888532 235789999999999999999999998 79999999999999776 89
Q ss_pred EEEeecCCCCCCCCCCCcc-eeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCC
Q 013504 247 AKLSDFGLARLGPSDGLSH-VSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDR 312 (441)
Q Consensus 247 ~kl~DFGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~ 312 (441)
|||+|||+++.....-... ....++-|.+|.|||.+.+. .|+.+.|||+.|||+.||+|-.+-|..
T Consensus 175 VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 175 VKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred eEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999999865543221 34457889999999998875 589999999999999999998887754
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.1e-36 Score=318.53 Aligned_cols=146 Identities=27% Similarity=0.400 Sum_probs=128.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
++|.+.+.||+|+||.||+|.+..++. .||||++...... ....+.+|+.++..++||||+++++++....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~-----~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~- 77 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSK-----LYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN- 77 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCc-----EEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-
Confidence 679999999999999999999886554 3999998754322 2356788999999999999999998887655
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..||||||+++++|.+++.. ...+++..++.|+.||+.||.|||.. +|+||||||+||||+.++.+||+|||
T Consensus 78 ---~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 78 ---NVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred ---EEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 45999999999999999975 35688999999999999999999998 99999999999999999999999999
Q ss_pred CCC
Q 013504 254 LAR 256 (441)
Q Consensus 254 la~ 256 (441)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 986
No 379
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.2e-36 Score=280.62 Aligned_cols=237 Identities=30% Similarity=0.445 Sum_probs=191.3
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
||.|+||.||++.....+. .+++|.+...... ....+..|+.+++.++||||+++++.+.... ..++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~~v 71 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGK-----LYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE----KLYLV 71 (250)
T ss_pred CCCCCceEEEEEEECCCCc-----EEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC----eeEEE
Confidence 6999999999999876544 4899988765432 3457888999999999999999999887655 35999
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
|||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 72 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 72 LEYAPGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999999999763 4789999999999999999999997 9999999999999999999999999998865432
Q ss_pred CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
. .......++..|++||.+.+...+.++|+||||+++|+|++|..||..... ......+.. .
T Consensus 147 ~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~---~---------- 208 (250)
T cd05123 147 G--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILK---D---------- 208 (250)
T ss_pred C--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhc---C----------
Confidence 1 123446789999999999888889999999999999999999999965432 111111110 0
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSE 375 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 375 (441)
....+...+..+.+++.+||..||++||++.+
T Consensus 209 --~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 209 --PLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred --CCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 01122233677899999999999999999954
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-36 Score=312.25 Aligned_cols=266 Identities=28% Similarity=0.485 Sum_probs=211.8
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCc--ccceeEEEEEccccCch-hhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDS--HKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~--~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
.++..+.+.||+|.||.|++|...+.... .....||||.++..... ..+.+..|+.+|+.+ +||||+.++|+|...
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 34556666899999999999987654433 23677999999865443 457788999999998 699999999999885
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcC------C--------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCC
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRF------Q--------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSS 237 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~ 237 (441)
.. .++|+||+..|+|.++|..+. . ..++....+.++.||+.|+.||++. ++|||||..+
T Consensus 375 ~~----~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 375 GP----LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred Cc----eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 43 499999999999999998653 0 1388899999999999999999998 8999999999
Q ss_pred cEEEcCCCcEEEeecCCCCCCCCCCCcceeecee--cccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCC
Q 013504 238 NILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVV--GTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNR 314 (441)
Q Consensus 238 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~ 314 (441)
|||+..+..+||+|||+|+........... ... -...|||||.+....|+.++|||||||+||||+| |..||.+..
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~-~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTK-SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEec-CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 999999999999999999965544332211 122 2345999999999999999999999999999999 889997532
Q ss_pred chhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 315 PKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
. ...+.++++.. .+...+..+++++.++++.||+.+|++||++.++.+.|+..+.
T Consensus 527 ~--~~~l~~~l~~G--------------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 527 P--TEELLEFLKEG--------------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred c--HHHHHHHHhcC--------------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 1 12223333221 1123344578899999999999999999999999999999654
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=297.69 Aligned_cols=242 Identities=25% Similarity=0.340 Sum_probs=196.8
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 173 (441)
+++.|.....+|.|+|+.|-.+.+..+... .++|++.+... ...+|+.++... .||||+++.+.+.+...
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~-----~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQE-----PAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccc-----hhheecccccc----ccccccchhhhhcCCCcceeecceecCCce
Confidence 456788888899999999999998877654 89999877622 223577676665 79999999999987654
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE-cCCCcEEEeec
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-DEQWNAKLSDF 252 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl-~~~~~~kl~DF 252 (441)
.|+|||++.|+-|.+.+... +.....+..|+.+|+.++.|||.+ |||||||||+|||+ +..++++|+||
T Consensus 391 ----~~~v~e~l~g~ell~ri~~~---~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 391 ----IYLVMELLDGGELLRRIRSK---PEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred ----eeeeehhccccHHHHHHHhc---chhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 49999999999998888653 233377788999999999999998 99999999999999 68999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
|.++..... ..+.+-|..|.|||++...+|+.++||||||++||+||+|+.||...... ..+...+
T Consensus 461 G~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i------- 526 (612)
T KOG0603|consen 461 GFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRI------- 526 (612)
T ss_pred chhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhh-------
Confidence 999876543 33456789999999999999999999999999999999999999754433 1111111
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..+.+...++...++|+.+||+.||.+||++.++...
T Consensus 527 ----------~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 527 ----------QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ----------cCCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1123335678899999999999999999999999873
No 382
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-37 Score=273.61 Aligned_cols=273 Identities=22% Similarity=0.360 Sum_probs=203.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
..|+...+||+|.||+||+|....++.. ||+|++...+.. .....++|+.+|..++|+|++.++..|......
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kk-----valkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp 91 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKK-----VALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 91 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccch-----hHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence 4566677899999999999998887754 777765443221 224567999999999999999999988765443
Q ss_pred Ce----eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEe
Q 013504 175 GI----QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLS 250 (441)
Q Consensus 175 ~~----~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~ 250 (441)
.. .+|+||.+|+ .+|.-.|..+ ...++...+.+++.++..||.|+|.. .|+|||+||+|+||+.+|.+||+
T Consensus 92 ~~r~r~t~ylVf~~ce-hDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklA 166 (376)
T KOG0669|consen 92 TNRDRATFYLVFDFCE-HDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLA 166 (376)
T ss_pred cccccceeeeeHHHhh-hhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEee
Confidence 33 3799999995 4888888654 46789999999999999999999998 99999999999999999999999
Q ss_pred ecCCCCCCCCCC--CcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhh
Q 013504 251 DFGLARLGPSDG--LSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 251 DFGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~ 327 (441)
|||+++...... .....+..+-|.+|.+||.+.+ ..|+++.|||+.|||+.||+||.+-++++.......++..+..
T Consensus 167 DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcG 246 (376)
T KOG0669|consen 167 DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCG 246 (376)
T ss_pred ccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhc
Confidence 999998654322 1222455677999999998876 5699999999999999999999999987766555444433221
Q ss_pred hc--------ccccchhhhc-CCCCCCcchH--H------HHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 328 HL--------TDAKKFTMIL-DPKLEGKYSI--K------LAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 328 ~~--------~~~~~~~~~~-~~~~~~~~~~--~------~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.. .+...+..+- .|...+.+.. + -.++..+|+..++..||.+|+.+.+++..
T Consensus 247 s~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 247 SITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 11 1111111111 1111111110 1 12367799999999999999999999874
No 383
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=295.11 Aligned_cols=243 Identities=23% Similarity=0.354 Sum_probs=203.3
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
.+++.+..||-||||.|=++....... .+|+|.+++....+ .+.+..|-.||..++.|.||++|..|.+...
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~-----~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKA-----TFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccch-----HHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence 456677789999999999988766543 27888888766543 3457789999999999999999998887664
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
.|++||-|-||.|+..|.. .+.|+..++..++..+++|+.|||++ +||+|||||+|.||+.+|.+||.|||
T Consensus 495 ----vYmLmEaClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 ----VYMLMEACLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred ----hhhhHHhhcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 4999999999999999977 47899999999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhccccc
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAK 333 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 333 (441)
+|+..... ..+.+++|||.|.|||++.+...+.++|.||||+++||||+|.+||...++.....++- ..+.
T Consensus 566 FAKki~~g---~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL---kGid--- 636 (732)
T KOG0614|consen 566 FAKKIGSG---RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL---KGID--- 636 (732)
T ss_pred hHHHhccC---CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH---hhhh---
Confidence 99987654 35788999999999999999999999999999999999999999998766543332221 1110
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK 372 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 372 (441)
...+|..++....+|+++++..+|.+|..
T Consensus 637 ----------~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 637 ----------KIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ----------hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 11234456677889999999999999976
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.3e-35 Score=275.86 Aligned_cols=222 Identities=21% Similarity=0.248 Sum_probs=176.8
Q ss_pred ccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCC
Q 013504 108 GGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187 (441)
Q Consensus 108 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 187 (441)
|.||.||++.+..++.. +|+|.+.... ...+|...+....||||+++++++...+ ..++||||+++
T Consensus 4 g~~~~v~~~~~~~~~~~-----~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~lv~e~~~~ 69 (237)
T cd05576 4 GVIDKVLLVMDTRTQQT-----FILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED----SVFLVLQHAEG 69 (237)
T ss_pred cccceEEEEEEccCCcE-----EEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC----eEEEEEecCCC
Confidence 89999999998877654 9999987643 2234555555567999999999988765 35999999999
Q ss_pred CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCccee
Q 013504 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267 (441)
Q Consensus 188 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 267 (441)
|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||.+...... .
T Consensus 70 ~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~ 139 (237)
T cd05576 70 GKLWSHISKF--LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----C 139 (237)
T ss_pred CCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc-----c
Confidence 9999999763 4689999999999999999999998 9999999999999999999999999987654332 2
Q ss_pred eceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcc
Q 013504 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347 (441)
Q Consensus 268 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (441)
....++..|+|||.+.+..++.++||||+|+++|||++|..|+....... .. ......
T Consensus 140 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~~----------~~~~~~ 197 (237)
T cd05576 140 DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------NT----------HTTLNI 197 (237)
T ss_pred ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------cc----------ccccCC
Confidence 23456778999999988889999999999999999999998875321100 00 000012
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCCCHHH
Q 013504 348 SIKLAQKLAAVANKCLARQAKGRPKMSE 375 (441)
Q Consensus 348 ~~~~~~~l~~li~~cl~~dP~~RPs~~e 375 (441)
+..++..+.+++.+||+.||++||++.+
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 2335677899999999999999999743
No 385
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=275.54 Aligned_cols=274 Identities=24% Similarity=0.378 Sum_probs=223.9
Q ss_pred HHHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEE
Q 013504 90 SELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYC 168 (441)
Q Consensus 90 ~~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~ 168 (441)
.++.....+++...++-+|.||.||.|.++......+...|-+|.++....+ ....++.|--.+..+.|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 3444555678888899999999999999998777777777888888765433 346788999999999999999999999
Q ss_pred eccccCCeeEEEEEeccCCCChHHHHhh------cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc
Q 013504 169 AEDDERGIQRLLIYEYMPNRSVQDHLTS------RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242 (441)
Q Consensus 169 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~ 242 (441)
.++.. ..+.++.++.-|+|..||.. .....+...+...++.|++.|+.|||.. +|||.||..+|.+||
T Consensus 357 ie~~~---~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 357 IEDYA---TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred eeccC---cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 87654 35888999999999999972 2234677788899999999999999998 999999999999999
Q ss_pred CCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHH
Q 013504 243 EQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKL 321 (441)
Q Consensus 243 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~ 321 (441)
+..++||+|=.++|.+-+.+.............||+||.+....|+.++|||||||++|||+| |+.|+...++.+....
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y 510 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY 510 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH
Confidence 999999999999997666555544455556778999999999999999999999999999999 9999976655433322
Q ss_pred HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhh
Q 013504 322 LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDA 386 (441)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 386 (441)
+ .++.. -..+.+||+++..++.-||...|++||++++++.-|.+.-.+
T Consensus 511 l-------kdGyR----------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 511 L-------KDGYR----------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred H-------hccce----------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 2 12211 123447899999999999999999999999999999876543
No 386
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-36 Score=274.91 Aligned_cols=250 Identities=25% Similarity=0.442 Sum_probs=199.0
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
.++|...++||+|+|.+|.++.+..+... +|+|++++.-.. +..-...|-.+.... +||.+|-++.+|+..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qi-----yamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQI-----YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehccccee-----eehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 36899999999999999999999888765 999998764332 223345677777765 899999999999877
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
. .+++|.||++||+|.-++++ +..++++.+..+..+|+.||.|||++ |||+||||.+|||||..|.+||+|
T Consensus 324 s----rlffvieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 S----RLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred c----eEEEEEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 6 45999999999999988876 57899999999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCc-hhHHHHHHhhhhhcc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRP-KSEQKLLEWVRPHLT 330 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~-~~~~~~~~~~~~~~~ 330 (441)
+|+++.....+ ...++++|||.|+|||++.+..|...+|+|+|||+++||+.|+.||+.... ...+...+++-.
T Consensus 395 ygmcke~l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq--- 469 (593)
T KOG0695|consen 395 YGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ--- 469 (593)
T ss_pred cchhhcCCCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH---
Confidence 99999765443 346789999999999999999999999999999999999999999963221 111111111111
Q ss_pred cccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCC
Q 013504 331 DAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPK 372 (441)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 372 (441)
.++...+ ..+...+.....+++.-|.+||.+|..
T Consensus 470 ------vilekqi--riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 470 ------VILEKQI--RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ------HHhhhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 1111111 123344556778899999999999854
No 387
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-35 Score=289.15 Aligned_cols=244 Identities=26% Similarity=0.380 Sum_probs=193.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh---HHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH---KEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
-|..++.||-|+||+|.++...++... +|+|.+.+.+.-.. .....|-.||.....+-||+||-.|++++.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~l-----YAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdn- 703 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRAL-----YAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN- 703 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhH-----HHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCc-
Confidence 477888999999999999988777554 89999887654332 235679999999999999999999998885
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
+|+||+|++||++..+|.+ .+.|++..+..++.++.+|+.+.|.- |+|||||||+|||||.+|.+||+||||
T Consensus 704 ---LYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 704 ---LYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred ---eEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccc
Confidence 5999999999999999987 47899999999999999999999986 999999999999999999999999999
Q ss_pred CCCCCC--------CCCc--------------------------------ceeeceecccCcCCccccccCCCCccccch
Q 013504 255 ARLGPS--------DGLS--------------------------------HVSTAVVGTIGYAAPEYIQTGRLTYKSDIW 294 (441)
Q Consensus 255 a~~~~~--------~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw 294 (441)
|.-+.. .+.. ......+||+.|+|||++....|+..+|+|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 853211 0000 011246899999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCCchhHH-HHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCC
Q 013504 295 SFGVFLYELITGRRPLDRNRPKSEQ-KLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRP 371 (441)
Q Consensus 295 SlG~il~elltG~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 371 (441)
|.|||||||+.|+.||-...+.+.+ +++.|-. .+ .-.+..+++.+..++|.++++ ++++|.
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~-----------~l----~~~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGETQYKVINWRN-----------FL----HIPYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCcceeeeeehhh-----------cc----ccccccccCHHHHHHHHHHhc-Chhhhh
Confidence 9999999999999999777665443 3334432 11 222334555666677766544 566664
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.1e-34 Score=297.68 Aligned_cols=271 Identities=18% Similarity=0.206 Sum_probs=170.7
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEec-c-c
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAE-D-D 172 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~-~ 172 (441)
..++|.+.+.||+|+||.||+|++..+.. .....||+|++...... +.+..| .+....+.+++.++..+.. . .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 45789999999999999999999887622 22345999987643321 111111 1122223333332222111 0 0
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCC------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQ------------------ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 234 (441)
......+|||||+++++|.+++..... .......+..++.||+.||.|||++ +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 122246999999999999999865311 0112334668999999999999998 9999999
Q ss_pred CCCcEEEcC-CCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccC----------------------CCCccc
Q 013504 235 KSSNILLDE-QWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG----------------------RLTYKS 291 (441)
Q Consensus 235 Kp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~ 291 (441)
||+|||++. ++.+||+|||+++...... ........||+.|+|||.+... .++.++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~-~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGI-NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccc-ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999985 6789999999998643322 2233457899999999965432 234567
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcch------HHHHHHHHHHHHHhhcc
Q 013504 292 DIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYS------IKLAQKLAAVANKCLAR 365 (441)
Q Consensus 292 DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~ 365 (441)
|||||||++|||+++..|++... ..+...+...-.+...+.....+....... ........+|+.+||+.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNL----IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHH----HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 99999999999999877654221 111000000000000111111111000000 00123456899999999
Q ss_pred cCCCCCCHHHHHH
Q 013504 366 QAKGRPKMSEVVE 378 (441)
Q Consensus 366 dP~~RPs~~evl~ 378 (441)
||++|||+.++++
T Consensus 437 dP~kR~ta~e~L~ 449 (566)
T PLN03225 437 KGRQRISAKAALA 449 (566)
T ss_pred CcccCCCHHHHhC
Confidence 9999999999998
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=285.90 Aligned_cols=274 Identities=18% Similarity=0.259 Sum_probs=183.8
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCC-----------cccceeEEEEEccccCchhhHH--------------HHHH
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTED-----------SHKKIDIAVKQLSRRGLQGHKE--------------WVTE 149 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~-----------~~~~~~vavK~~~~~~~~~~~~--------------~~~E 149 (441)
..++|++.++||+|+||.||+|.+...+. ......||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 45789999999999999999998643321 1233469999986543222222 3347
Q ss_pred HHHhccCCCCCe-----eeEEeEEecccc----CCeeEEEEEeccCCCChHHHHhhcC----------------------
Q 013504 150 VNVLGVVEHPNL-----VKLIGYCAEDDE----RGIQRLLIYEYMPNRSVQDHLTSRF---------------------- 198 (441)
Q Consensus 150 ~~il~~l~hpnI-----v~l~~~~~~~~~----~~~~~~lv~E~~~~gsL~~~l~~~~---------------------- 198 (441)
+.++.+++|.++ ++++++|..... .....+|||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677787764311 1123599999999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCC
Q 013504 199 QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAA 278 (441)
Q Consensus 199 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 278 (441)
...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ........+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-NFNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC-ccCccccCCCcceeC
Confidence 12346778899999999999999998 99999999999999999999999999997543321 111122345899999
Q ss_pred ccccccCC--------------------C--CccccchhHHHHHHHHHhCCC-CCCCCCchh-HHHHHHhhhhhcccccc
Q 013504 279 PEYIQTGR--------------------L--TYKSDIWSFGVFLYELITGRR-PLDRNRPKS-EQKLLEWVRPHLTDAKK 334 (441)
Q Consensus 279 PE~~~~~~--------------------~--~~~~DvwSlG~il~elltG~~-P~~~~~~~~-~~~~~~~~~~~~~~~~~ 334 (441)
||.+.... + ..+.||||+||++++|++|.. ||....... ........ ...
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~------~~~ 452 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDND------LNR 452 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccch------HHH
Confidence 99875432 1 124799999999999999875 764321110 00000000 000
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccC---CCCCCHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQA---KGRPKMSEVVE 378 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 378 (441)
+.........-......+....+|+.+||..+| .+|+|++++++
T Consensus 453 ~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 453 WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 000000111111122356788999999999766 68999999986
No 390
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.8e-33 Score=260.35 Aligned_cols=239 Identities=31% Similarity=0.478 Sum_probs=191.7
Q ss_pred cceeEEEEEEcCCCCcccceeEEEEEccccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCC
Q 013504 109 GFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN 187 (441)
Q Consensus 109 ~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~ 187 (441)
+||.||+|.+..++. .+++|++....... .+.+.+|+.++++++|+||+++++++.... ..+++|||+++
T Consensus 1 ~~g~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~l~~e~~~~ 71 (244)
T smart00220 1 SFGKVYLARDKKTGK-----LVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED----KLYLVMEYCDG 71 (244)
T ss_pred CceEEEEEEECCCCc-----EEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC----EEEEEEeCCCC
Confidence 589999999876554 39999987765444 678889999999999999999999998764 35999999999
Q ss_pred CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCccee
Q 013504 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267 (441)
Q Consensus 188 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 267 (441)
++|.+++... ..+++..++.++.+++.+|.|||+. +++|+||+|.||+++.++.++|+|||.+....... ..
T Consensus 72 ~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~ 143 (244)
T smart00220 72 GDLFDLLKKR--GRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LL 143 (244)
T ss_pred CCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc---cc
Confidence 9999999763 3389999999999999999999998 99999999999999999999999999998755432 23
Q ss_pred eceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcc
Q 013504 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347 (441)
Q Consensus 268 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (441)
....++..|++||.+.+..++.++|||+||+++++|++|..||..... .....+......... ...
T Consensus 144 ~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~--~~~~~~~~~~~~~~~------------~~~ 209 (244)
T smart00220 144 TTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ--LLELFKKIGKPKPPF------------PPP 209 (244)
T ss_pred ccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHhccCCCC------------ccc
Confidence 446788999999999888899999999999999999999999965211 111222111100000 000
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 348 SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 348 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
...++..+.+++.+||..+|++||++.++++
T Consensus 210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0015568999999999999999999999986
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-33 Score=265.21 Aligned_cols=138 Identities=20% Similarity=0.302 Sum_probs=122.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-----C---CCeeeEEeE
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-----H---PNLVKLIGY 167 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----h---pnIv~l~~~ 167 (441)
..+|.+.++||=|.|++||+|.+...... ||+|+.+... ...+..+.||.+|++++ | .+||+|+++
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~-----VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRY-----VALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeE-----EEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 36899999999999999999998776654 9999987543 23456788999999873 2 489999999
Q ss_pred EeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc
Q 013504 168 CAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD 242 (441)
Q Consensus 168 ~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~ 242 (441)
|...+..+.+.|+|+|++ |.+|..+|.......++...+..|++||+.||.|||..| +|||.||||+|||+.
T Consensus 151 FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 151 FKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred ceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 999999999999999999 889999998877889999999999999999999999985 999999999999993
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=6e-34 Score=247.60 Aligned_cols=262 Identities=21% Similarity=0.355 Sum_probs=197.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-CCCeeeEEeEEeccccC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDER 174 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 174 (441)
.++|++++.+|+|.|++||.|....+... +.||+++.. ..+.+.+|+.||..|+ ||||+++++...+....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK-----~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk 108 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEK-----CVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESK 108 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCce-----EEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCcccc
Confidence 47899999999999999999987665543 889998764 3467789999999996 99999999999876654
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-CcEEEeecC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-WNAKLSDFG 253 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-~~~kl~DFG 253 (441)
...||+||+++.+..... ..++...+..++.+++.||.|||+. ||+|||+||.|++||.. -.++|+|+|
T Consensus 109 --tpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 109 --TPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred --CchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecc
Confidence 458999999887776554 3577788999999999999999998 99999999999999864 569999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCchhHH-----------HH
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQT-GRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQ-----------KL 321 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~-----------~~ 321 (441)
+|.+..... ..+..+.+..|..||.+.. ..|+..-|+|||||++..|+..+.||........+ ++
T Consensus 179 LAEFYHp~~---eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el 255 (338)
T KOG0668|consen 179 LAEFYHPGK---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL 255 (338)
T ss_pred hHhhcCCCc---eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHH
Confidence 999876643 2344577888999998865 56899999999999999999999999654433222 11
Q ss_pred HHhhhhhcc-cccchhhhcCCCCCCcc--------hHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 322 LEWVRPHLT-DAKKFTMILDPKLEGKY--------SIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..++...-. -...+..++....+..+ ..-..++..+++.++|..|-.+|||+.|.+.
T Consensus 256 ~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 256 YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 111111100 01111111111111000 0113477889999999999999999999887
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-34 Score=243.07 Aligned_cols=202 Identities=25% Similarity=0.375 Sum_probs=165.8
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~ 174 (441)
++...+..||+|+||.|=+-++..++.. .|+|.+..+- .+..++.++|+.+..+. .+|.+|.+||........
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~i-----mAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTI-----MAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeE-----EEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 4455556699999999988888777654 8999987643 34567788999987775 899999999977766543
Q ss_pred CeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
++.||.| .-+|..+..+ ..++.+++..+-+|+..|+.||.|||++ +.|||||+||+||||+.+|++|+|||
T Consensus 121 ----wIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDF 193 (282)
T KOG0984|consen 121 ----WICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDF 193 (282)
T ss_pred ----EEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEccc
Confidence 8999999 4588777543 2367899999999999999999999997 58999999999999999999999999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCcccccc----CCCCccccchhHHHHHHHHHhCCCCCCCC
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQT----GRLTYKSDIWSFGVFLYELITGRRPLDRN 313 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltG~~P~~~~ 313 (441)
|++..+...- ..+...|-..|||||.+.. ..|+.++||||||+++.||.+++.||+..
T Consensus 194 GIsG~L~dSi---Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 194 GISGYLVDSI---AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ccceeehhhh---HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 9998764432 2233567788999998753 46899999999999999999999999754
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=284.22 Aligned_cols=245 Identities=28% Similarity=0.414 Sum_probs=182.7
Q ss_pred Ccccceeeccccee-EEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCCe
Q 013504 99 FSRSLMIGEGGFGG-VYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 99 f~~~~~LG~G~~g~-Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~~ 176 (441)
|...+++|.|+-|+ ||+|.+.+. .||||.+-... ..-..+|+..|+.- +|||||++|+.-.++.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R-------~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q---- 576 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGR-------EVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQ---- 576 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCc-------eehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCc----
Confidence 44445789999876 799998765 39999885432 33456899999998 7999999966544433
Q ss_pred eEEEEEeccCCCChHHHHhhc-CCC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC---C--CcEEE
Q 013504 177 QRLLIYEYMPNRSVQDHLTSR-FQA-TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE---Q--WNAKL 249 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~-~~~-~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~---~--~~~kl 249 (441)
.+||..|.| ..+|.+++... ... .......+.+..|++.||++||+- +||||||||+||||+. + ..++|
T Consensus 577 F~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~i 652 (903)
T KOG1027|consen 577 FLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKI 652 (903)
T ss_pred eEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEe
Confidence 569999999 67999999763 111 111134578899999999999986 9999999999999965 2 46899
Q ss_pred eecCCCCCCCCCCCc-ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhC-CCCCCCCCchhHHHHHHhhhh
Q 013504 250 SDFGLARLGPSDGLS-HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITG-RRPLDRNRPKSEQKLLEWVRP 327 (441)
Q Consensus 250 ~DFGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG-~~P~~~~~~~~~~~~~~~~~~ 327 (441)
+|||+++........ .......||.+|+|||++....-+.++|||||||++|+.++| .+||+..-..+..-+
T Consensus 653 SDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl------ 726 (903)
T KOG1027|consen 653 SDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL------ 726 (903)
T ss_pred cccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh------
Confidence 999999987654422 224567899999999999998888899999999999999996 899975432211100
Q ss_pred hcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 328 HLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
........ +.+. .++ +..+||.+|+..+|..||++.+|+.
T Consensus 727 --~~~~~L~~-L~~~------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 727 --TGNYTLVH-LEPL------PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --cCccceee-eccC------chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00000000 0000 112 7889999999999999999999986
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=255.78 Aligned_cols=272 Identities=23% Similarity=0.308 Sum_probs=200.9
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcccc--CchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR--GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
.+.+..+.||-|+||.||.+++...+.. ||+|++... +....+++.+|+.+|.-++|.|++..+++.......
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrr-----valkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d 127 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKR-----VALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS 127 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccc-----hhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch
Confidence 3566678899999999999987666544 899888653 223457889999999999999999998877654322
Q ss_pred C-eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 175 G-IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 175 ~-~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. ...|+|+|++ ..+|...|.. ...++...+.-+++||++||.|||+. +|+||||||.|.|++.|..+||||||
T Consensus 128 fFqEiYV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 128 FFQELYVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred HHHHHHHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccc
Confidence 1 1247788888 5688888866 46788888999999999999999998 99999999999999999999999999
Q ss_pred CCCCCCCCCCcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhc---
Q 013504 254 LARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHL--- 329 (441)
Q Consensus 254 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~--- 329 (441)
+++....... ...+..+-|-.|.|||++.+. .|+.++||||.|||+.||+..+.-|+...+....+++..+....
T Consensus 202 LARvee~d~~-~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E 280 (449)
T KOG0664|consen 202 LARTWDQRDR-LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE 280 (449)
T ss_pred cccccchhhh-hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence 9997654432 234445779999999999874 58999999999999999999999998776665554433221100
Q ss_pred -----ccccchhhhc----CCCCCCcc----hHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 330 -----TDAKKFTMIL----DPKLEGKY----SIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 330 -----~~~~~~~~~~----~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
-++.+...+. .|.+...+ +..-..+...+...++..||++|.+..+.+..+
T Consensus 281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 0011111111 11111111 112233566788889999999999998888754
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=2.7e-33 Score=275.49 Aligned_cols=254 Identities=25% Similarity=0.359 Sum_probs=207.2
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.++|.....+|+|+||.||++++..+++. .|+|+++........-+.+|+-+++..+||||+.++|.+...+..
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~el-----aavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dkl- 87 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGEL-----AAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKL- 87 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCch-----hhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCc-
Confidence 36799999999999999999998877765 888888877666667777899999999999999999999887754
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
+++||||.||+|.+..+- .+++++.++..++++.+.||.|||+. +-+|||||-.|||+++.|.+|++|||.+
T Consensus 88 ---wicMEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 88 ---WICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred ---EEEEEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 999999999999998865 68999999999999999999999998 8899999999999999999999999998
Q ss_pred CCCCCCCCcceeeceecccCcCCcccc---ccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYI---QTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDA 332 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 332 (441)
..+...- .....+.||+.|||||+. ..+.|...+|||++|+...|+---++|.....+.....+... .
T Consensus 160 aqitati--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk---S---- 230 (829)
T KOG0576|consen 160 AQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK---S---- 230 (829)
T ss_pred hhhhhhh--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc---c----
Confidence 7654432 234568999999999975 457899999999999999999888888654443322222111 0
Q ss_pred cchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 333 KKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+|. ...-.....+.+.++++.||.++|++||+++.++.
T Consensus 231 -----~~qpp-~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 231 -----GFQPP-TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -----CCCCC-cccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 01111 11122356778999999999999999999988765
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=262.50 Aligned_cols=197 Identities=25% Similarity=0.437 Sum_probs=168.5
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--------hHHHHHHHHHhccCC---CCCeeeEE
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--------HKEWVTEVNVLGVVE---HPNLVKLI 165 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~il~~l~---hpnIv~l~ 165 (441)
.+|...+.||.|+||.|++|+++.... .|.||.+.+...-. .-..-.|+.||..++ |+||++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~-----eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNY-----EVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred ccceeeeeccccccceEEEeeecccce-----EEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 468999999999999999999987643 48999987654211 112346999999997 99999999
Q ss_pred eEEeccccCCeeEEEEEecc-CCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 166 GYCAEDDERGIQRLLIYEYM-PNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 166 ~~~~~~~~~~~~~~lv~E~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
++|.+++. .||+||-- +|.+|.++|.. ...+++..+..|+.||+.|+++||++ +|||||||-+||.++.+
T Consensus 636 dfFEddd~----yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 636 DFFEDDDY----YYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSN 706 (772)
T ss_pred heeecCCe----eEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecC
Confidence 99998874 49999974 67899999976 47899999999999999999999998 99999999999999999
Q ss_pred CcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCC-ccccchhHHHHHHHHHhCCCCCC
Q 013504 245 WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT-YKSDIWSFGVFLYELITGRRPLD 311 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltG~~P~~ 311 (441)
|-+||+|||.+...... ....++||..|.|||++.+..|- ..-|||++|++||-++....||-
T Consensus 707 g~~klidfgsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CeEEEeeccchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999999998765443 34568999999999999998874 55899999999999999888873
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.2e-30 Score=231.32 Aligned_cols=211 Identities=38% Similarity=0.613 Sum_probs=179.9
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEe
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYE 183 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E 183 (441)
||+|++|.||++....++. .+++|.+...... ....+.+|+.+++.+.|++|+++++++.... ..+++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~----~~~~~~e 71 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGK-----KVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN----HLYLVME 71 (215)
T ss_pred CCcCCceEEEEEEecCCCc-----EEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC----eEEEEEe
Confidence 6899999999999876443 3899998765432 2467889999999999999999999998764 3599999
Q ss_pred ccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC-CCcEEEeecCCCCCCCCCC
Q 013504 184 YMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAKLSDFGLARLGPSDG 262 (441)
Q Consensus 184 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~~~~~ 262 (441)
|+++++|.+++.... ..+++..+..++.+++.+|.+||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 72 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 72 YCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred cCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 999999999997632 4689999999999999999999998 9999999999999999 8999999999998654332
Q ss_pred CcceeeceecccCcCCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCC
Q 013504 263 LSHVSTAVVGTIGYAAPEYIQTG-RLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDP 341 (441)
Q Consensus 263 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (441)
. ......+...|++||.+... .++.+.|+|++|+++++|
T Consensus 148 ~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------- 187 (215)
T cd00180 148 S--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------- 187 (215)
T ss_pred c--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------
Confidence 1 12335678899999998877 788999999999999998
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 342 KLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 342 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..+.+++..|++.+|.+||++.++++.
T Consensus 188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -----------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -----------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 347789999999999999999999864
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=4e-31 Score=240.60 Aligned_cols=266 Identities=25% Similarity=0.292 Sum_probs=194.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcccc--CchhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR--GLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
..+|...+.+|.|.- .|..+.+.-.+ .+||+|++... +....++..+|..++..+.|+||++++.+|.....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~-----~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLG-----RPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT 89 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhcc-----CceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcccc
Confidence 356777788999988 56666544333 34899887754 22345778899999999999999999999876442
Q ss_pred C--CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEee
Q 013504 174 R--GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSD 251 (441)
Q Consensus 174 ~--~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~D 251 (441)
. ....|+||||| .++|...+. -.++-..+..|++|++.|+.|||+. +|+||||||+||++..++.+||.|
T Consensus 90 l~~~~e~y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~d 161 (369)
T KOG0665|consen 90 LEEFQEVYLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILD 161 (369)
T ss_pred HHHHHhHHHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeecc
Confidence 2 12358999999 568888886 3577889999999999999999998 999999999999999999999999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhH-H-----------
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSE-Q----------- 319 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~-~----------- 319 (441)
||+|+..... ...+.++.|..|.|||++.+..|...+||||+||++.||++|..-|.+....+. .
T Consensus 162 fg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 162 FGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred chhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCH
Confidence 9999864432 345668899999999999998899999999999999999999998864322111 0
Q ss_pred ----HHHHhhhhhcccc-----cchhhhc-CCCCCCc--chHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 320 ----KLLEWVRPHLTDA-----KKFTMIL-DPKLEGK--YSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 320 ----~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
++...++...... ..+...+ |..+... .+.--...+.+++.+||-.+|++|.++.++|.
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 1111111111100 0011111 1111100 01112345779999999999999999999998
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=2.3e-31 Score=255.11 Aligned_cols=269 Identities=22% Similarity=0.294 Sum_probs=201.9
Q ss_pred HHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC------CCCeeeEE
Q 013504 92 LKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE------HPNLVKLI 165 (441)
Q Consensus 92 ~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~l~ 165 (441)
.+.....|.+....|+|=|++|..|.+...+. .||||++...... .+.=+.|++||++|+ .-|+++|+
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~-----~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQ-----EVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCC-----eeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 34567889999999999999999998876655 4999999876533 344468999999995 24889988
Q ss_pred eEEeccccCCeeEEEEEeccCCCChHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 166 GYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRF-QATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 166 ~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
-.|...+ ++|||+|-+ .-+|.+.|+... ...|....+..+++|+..||..|-.. +|+|.||||+|||+++.
T Consensus 501 r~F~hkn----HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 501 RHFKHKN----HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred HHhhhcc----eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 8877665 469999988 669999997542 34678889999999999999999976 99999999999999876
Q ss_pred C-cEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHH
Q 013504 245 W-NAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323 (441)
Q Consensus 245 ~-~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~ 323 (441)
- .+||||||.|....... -+.+.-+..|.|||++.+.+|+...|+||.||+||||+||+..|.+........+..
T Consensus 573 k~iLKLCDfGSA~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~m 648 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFM 648 (752)
T ss_pred cceeeeccCcccccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHH
Confidence 4 57999999998765543 233455678999999999999999999999999999999999997665444333322
Q ss_pred hhhhhccc-----ccchhhhcC--------------------------C------CC-----CCcchHHHHHHHHHHHHH
Q 013504 324 WVRPHLTD-----AKKFTMILD--------------------------P------KL-----EGKYSIKLAQKLAAVANK 361 (441)
Q Consensus 324 ~~~~~~~~-----~~~~~~~~~--------------------------~------~~-----~~~~~~~~~~~l~~li~~ 361 (441)
-+...+++ ..-....+| | .+ ...........|.+|+..
T Consensus 649 e~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdk 728 (752)
T KOG0670|consen 649 ELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDK 728 (752)
T ss_pred HhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHH
Confidence 11111111 000000000 0 00 011122455678999999
Q ss_pred hhcccCCCCCCHHHHHH
Q 013504 362 CLARQAKGRPKMSEVVE 378 (441)
Q Consensus 362 cl~~dP~~RPs~~evl~ 378 (441)
||..||++|.+..++|.
T Consensus 729 ml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 729 MLILDPEKRITVNQALK 745 (752)
T ss_pred HhccChhhcCCHHHHhc
Confidence 99999999999988875
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=2.2e-29 Score=230.67 Aligned_cols=199 Identities=34% Similarity=0.509 Sum_probs=170.2
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
|...+.||.|++|.||+|....++. .+++|.+...... ..+.+.+|+..+.+++|+|++++++++.....
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~---- 71 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGE-----LVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEP---- 71 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCc-----EEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCc----
Confidence 5667889999999999999876544 3999999876554 56788899999999999999999999877653
Q ss_pred EEEEEeccCCCChHHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQAT-LPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
.++++||+++++|.+++... .. +++..+..++.+++.+|.+||+. +++|+||+|.||+++.++.++|+|||++.
T Consensus 72 ~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~ 146 (225)
T smart00221 72 LYLVMEYCEGGDLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLAR 146 (225)
T ss_pred eEEEEeccCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceee
Confidence 48999999999999999763 23 88999999999999999999998 99999999999999999999999999988
Q ss_pred CCCCCCCcceeeceecccCcCCcccc-ccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 013504 257 LGPSDGLSHVSTAVVGTIGYAAPEYI-QTGRLTYKSDIWSFGVFLYELITGRRPLDR 312 (441)
Q Consensus 257 ~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~elltG~~P~~~ 312 (441)
....... .......++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 147 ~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 147 FIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 7544320 122346788899999998 666788899999999999999999999954
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=229.36 Aligned_cols=251 Identities=22% Similarity=0.378 Sum_probs=185.9
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEE-eccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYC-AEDD 172 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~-~~~~ 172 (441)
..+.|.+.+.||+|.||.+-++.++.+... +++|.+.+.. ...++|.+|..---.| .|.||+.-|+.. +..+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~-----ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTR-----IVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceE-----EEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 346788999999999999999999988754 8999987654 3467899998776566 689999988654 4333
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE-c-CCCcEEEe
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL-D-EQWNAKLS 250 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl-~-~~~~~kl~ 250 (441)
..+++|||++.|+|...+.. ..+.+.....++.|++.||.|+|++ ++||||||.+|||| + +...+|||
T Consensus 96 ----~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlc 165 (378)
T KOG1345|consen 96 ----AYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLC 165 (378)
T ss_pred ----eEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEee
Confidence 24789999999999998865 5688888999999999999999998 99999999999999 2 33479999
Q ss_pred ecCCCCCCCCCCCcceeeceecccCcCCccccccC-----CCCccccchhHHHHHHHHHhCCCCCCCCCc--hhHHHHHH
Q 013504 251 DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG-----RLTYKSDIWSFGVFLYELITGRRPLDRNRP--KSEQKLLE 323 (441)
Q Consensus 251 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltG~~P~~~~~~--~~~~~~~~ 323 (441)
|||+.+..... ......+..|.+||..... ...+.+|||.||++++.++||+.||+.... .......+
T Consensus 166 DFG~t~k~g~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~ 240 (378)
T KOG1345|consen 166 DFGLTRKVGTT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ 240 (378)
T ss_pred ecccccccCce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH
Confidence 99998864332 1223446679999976432 246779999999999999999999973321 11122333
Q ss_pred hhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 324 WVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
|...... .+.. .-..+++.+.++.++-|..++++|-...++-+
T Consensus 241 w~~rk~~-----------~~P~-~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 241 WLKRKNP-----------ALPK-KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred HhcccCc-----------cCch-hhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 3322111 1111 11235677889999999999999944444333
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=8.9e-30 Score=239.89 Aligned_cols=270 Identities=24% Similarity=0.356 Sum_probs=195.6
Q ss_pred HHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEecc
Q 013504 93 KTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAED 171 (441)
Q Consensus 93 ~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 171 (441)
....+.|..+.+||.|.|++||++.+... ......||+|.+..... ..++..|+++|..+ .+.||+++.+++...
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhh--ccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34567899999999999999999987762 22334599999977653 46788999999998 699999999999887
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC-CCcEEEe
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE-QWNAKLS 250 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~-~~~~kl~ 250 (441)
+.. ++||||++.....+++. .++...+..+++.++.||.++|++ |||||||||.|+|.+. .+.-.|+
T Consensus 108 d~v----~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~Lv 175 (418)
T KOG1167|consen 108 DQV----AIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLV 175 (418)
T ss_pred Cee----EEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEE
Confidence 754 99999999999888875 366889999999999999999998 9999999999999975 4567999
Q ss_pred ecCCCCCCC-----------------C-CC------------------------CcceeeceecccCcCCcccccc-CCC
Q 013504 251 DFGLARLGP-----------------S-DG------------------------LSHVSTAVVGTIGYAAPEYIQT-GRL 287 (441)
Q Consensus 251 DFGla~~~~-----------------~-~~------------------------~~~~~~~~~gt~~y~aPE~~~~-~~~ 287 (441)
|||+|.... . .+ .........||++|.|||++.. ...
T Consensus 176 DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Q 255 (418)
T KOG1167|consen 176 DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQ 255 (418)
T ss_pred echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCc
Confidence 999997210 0 00 0001123579999999998864 557
Q ss_pred CccccchhHHHHHHHHHhCCCCCCCCCchhH--HHHH---------Hh---hhh--hcc--c---cc----chhhh----
Q 013504 288 TYKSDIWSFGVFLYELITGRRPLDRNRPKSE--QKLL---------EW---VRP--HLT--D---AK----KFTMI---- 338 (441)
Q Consensus 288 ~~~~DvwSlG~il~elltG~~P~~~~~~~~~--~~~~---------~~---~~~--~~~--~---~~----~~~~~---- 338 (441)
+.++||||.|||++.+++++.||........ .++. +. ... .+. + .. .+..+
T Consensus 256 ttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 256 TTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIES 335 (418)
T ss_pred CCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhh
Confidence 8899999999999999999999954321111 1100 00 000 000 0 00 00000
Q ss_pred cCC--C--CC-CcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 339 LDP--K--LE-GKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 339 ~~~--~--~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
..+ . .. ......++..+.+++.+||+.||.+|.++++.|.
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000 0 01 1111224457889999999999999999999987
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=3.8e-29 Score=270.55 Aligned_cols=200 Identities=17% Similarity=0.208 Sum_probs=139.7
Q ss_pred cCCC-CCeeeEEeEEeccc---cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 013504 155 VVEH-PNLVKLIGYCAEDD---ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQII 230 (441)
Q Consensus 155 ~l~h-pnIv~l~~~~~~~~---~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ii 230 (441)
.++| +||++++++|.... .....++++|||+ +++|.++|... ...+++..++.++.||+.||.|||++ +|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 3455 68888888873322 1112346778887 67999999753 45699999999999999999999998 999
Q ss_pred ecccCCCcEEEcCCC-------------------cEEEeecCCCCCCCCCCC--------------cceeeceecccCcC
Q 013504 231 FRDFKSSNILLDEQW-------------------NAKLSDFGLARLGPSDGL--------------SHVSTAVVGTIGYA 277 (441)
Q Consensus 231 HrDlKp~NILl~~~~-------------------~~kl~DFGla~~~~~~~~--------------~~~~~~~~gt~~y~ 277 (441)
||||||+||||+..+ .+||+|||+++....... .......+||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996544 455566666553211000 00011246899999
Q ss_pred CccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHH
Q 013504 278 APEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAA 357 (441)
Q Consensus 278 aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 357 (441)
|||++.+..|+.++|||||||+||||++|..|+..... ........ ...+.. .........
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~~~~~~~---------~~~~~~-----~~~~~~~~~ 243 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TMSSLRHR---------VLPPQI-----LLNWPKEAS 243 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HHHHHHHh---------hcChhh-----hhcCHHHHH
Confidence 99999999999999999999999999999888742111 11100000 001100 011234568
Q ss_pred HHHHhhcccCCCCCCHHHHHH
Q 013504 358 VANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 358 li~~cl~~dP~~RPs~~evl~ 378 (441)
++.+||+.+|.+||++.++++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 889999999999999999987
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=2.9e-27 Score=209.24 Aligned_cols=169 Identities=25% Similarity=0.281 Sum_probs=129.3
Q ss_pred CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCccee
Q 013504 188 RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVS 267 (441)
Q Consensus 188 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 267 (441)
|+|.+++..+ +..+++..++.++.||+.||.|||++ + ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999754 45799999999999999999999987 4 999999999999999 9998865432
Q ss_pred eceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcc
Q 013504 268 TAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKY 347 (441)
Q Consensus 268 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (441)
...||+.|||||++.+..++.++|||||||++|||++|+.||........ ........ .... ++. ....
T Consensus 63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~-~~~~-------~~~-~~~~ 131 (176)
T smart00750 63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNG-MPAD-------DPR-DRSN 131 (176)
T ss_pred -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHH-hccC-------Ccc-cccc
Confidence 12689999999999999999999999999999999999999965432111 11111100 0000 000 0011
Q ss_pred hHHHHH--HHHHHHHHhhcccCCCCCCHHHHHHHHHHHHh
Q 013504 348 SIKLAQ--KLAAVANKCLARQAKGRPKMSEVVEVLNKIVD 385 (441)
Q Consensus 348 ~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 385 (441)
...+.. .+.+++.+||..+|.+||++.++++.+..+..
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 223444 69999999999999999999999998877654
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-26 Score=224.90 Aligned_cols=264 Identities=23% Similarity=0.281 Sum_probs=200.4
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCC----CCeeeEEeEEe-ccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEH----PNLVKLIGYCA-EDD 172 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h----pnIv~l~~~~~-~~~ 172 (441)
+|.+.+.||+|+||.||.|...... ...+|+|............+..|+.++..+.. +++..+++... ...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~----~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK----NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC----CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 7999999999999999999987654 33588888776543333367789999988863 58888888874 332
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-----CcE
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-----WNA 247 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-----~~~ 247 (441)
..|+||+.+ |.+|.++......+.++..+++.|+.|++.+|.+||+. |++||||||+|+++... ..+
T Consensus 95 ----~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 ----FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred ----eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 349999998 99999988665567899999999999999999999998 99999999999999765 459
Q ss_pred EEeecCCCC--CCCCCCC-----cce-eeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhH-
Q 013504 248 KLSDFGLAR--LGPSDGL-----SHV-STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSE- 318 (441)
Q Consensus 248 kl~DFGla~--~~~~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~- 318 (441)
.|.|||+++ ....... ... .....||..|+++....+.+.+.+.|+||++.++.+++.|..||........
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~ 246 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK 246 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchH
Confidence 999999998 3221111 111 2345699999999999999999999999999999999999999965543222
Q ss_pred HHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 319 QKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
..+.......... . .....+..+.++...+-..+..++|.+..+...|.+.....
T Consensus 247 ~~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 247 SKFEKDPRKLLTD---------R-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHHhhhhccc---------c-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111111111100 0 11223456667777777789999999999999998887654
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.3e-26 Score=209.40 Aligned_cols=265 Identities=16% Similarity=0.251 Sum_probs=207.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeEEeccccCC
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~ 175 (441)
-.|.++++||+|.||+++.|+..-++. +||||.-.... ...++..|.+..+.| ..++|...|-|..+.-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne-----~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~-- 98 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNE-----PVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY-- 98 (449)
T ss_pred ccceeccccccCcceeeecccccccCc-----eEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccch--
Confidence 369999999999999999998766655 49999876543 345677888888887 57888888755544332
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-----CcEEEe
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-----WNAKLS 250 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-----~~~kl~ 250 (441)
-.||||++ |.+|+|++.- .+..|+..+++.++.|++.-++|+|++ .+|+|||||+|+||... ..+.|+
T Consensus 99 --NiLVidLL-GPSLEDLFD~-CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 99 --NILVIDLL-GPSLEDLFDL-CGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred --hhhhhhhh-CcCHHHHHHH-hcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 38999999 9999998864 367899999999999999999999998 99999999999999643 458999
Q ss_pred ecCCCCCCCCCCCc-----ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 251 DFGLARLGPSDGLS-----HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 251 DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
|||+|+.+...... .......||..||+--...+.+.+.+.|+-|||-+++..|-|..||++..........+.+
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 99999987655422 2345678999999999888999999999999999999999999999876655444433333
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
....... . ...+...+|.++..-+.-.-..+-.+-|.+.-+...+.++++..
T Consensus 252 Ge~Kr~T-~---------i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 252 GETKRST-P---------IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred ccccccC-C---------HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 2111100 0 01233456777777777778888999999999999988888643
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=5.2e-26 Score=220.92 Aligned_cols=171 Identities=18% Similarity=0.154 Sum_probs=128.8
Q ss_pred HHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-----chhhHHHHHHHHHhccCCCCCeeeEEe
Q 013504 92 LKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-----LQGHKEWVTEVNVLGVVEHPNLVKLIG 166 (441)
Q Consensus 92 ~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~ 166 (441)
......+|.+.+.||+|+||+||+|.+..+... .+|||++.... ......+.+|+.+|+.++|+||++.+.
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~----~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~ 88 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGT----ARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLL 88 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCe----EEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEE
Confidence 344567899999999999999999987653221 37998865331 112456889999999999999985332
Q ss_pred EEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc-CCCcEEEcCCC
Q 013504 167 YCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF-KSSNILLDEQW 245 (441)
Q Consensus 167 ~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl-Kp~NILl~~~~ 245 (441)
.+ + ..||||||++|++|.. +.. .. ...++.|++.+|.|||+. ||+|||| ||+|||++.++
T Consensus 89 ~~---~----~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~ 149 (365)
T PRK09188 89 AT---G----KDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDG 149 (365)
T ss_pred Ec---C----CcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCC
Confidence 21 2 2399999999999963 211 11 146789999999999998 9999999 99999999999
Q ss_pred cEEEeecCCCCCCCCCCCcce------eeceecccCcCCccccccC
Q 013504 246 NAKLSDFGLARLGPSDGLSHV------STAVVGTIGYAAPEYIQTG 285 (441)
Q Consensus 246 ~~kl~DFGla~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 285 (441)
.+||+|||+|+.......... .....+++.|+|||.+...
T Consensus 150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999999999997644331111 1356789999999988643
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=9.7e-26 Score=197.96 Aligned_cols=264 Identities=19% Similarity=0.272 Sum_probs=204.3
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCC-CCeeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEH-PNLVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~ 173 (441)
...+|.+++.||+|+||.+|.|.....+.. ||||.-+... ...++..|..+.+.|++ ..|..+..|..+...
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~-----VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEE-----VAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCce-----EEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 346799999999999999999998877664 9999876543 34567789999988864 677777777766664
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcC---CCcEEEe
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDE---QWNAKLS 250 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~---~~~~kl~ 250 (441)
. .+||+.+ |.+|++.+.-. ...++..+++-++-|++.-++|+|.+ ++|||||||+|+|..- ...+.|+
T Consensus 86 n----vlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 86 N----VLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred c----eeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEE
Confidence 4 8999999 99999988632 46789999999999999999999998 9999999999999953 3568999
Q ss_pred ecCCCCCCCCCCC-----cceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhh
Q 013504 251 DFGLARLGPSDGL-----SHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWV 325 (441)
Q Consensus 251 DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~ 325 (441)
|||+|+...+... ........||..|.+--...+...+.+.|+-|+|.+|..+.-|..||++..+....+..+.+
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI 236 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI 236 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH
Confidence 9999987544321 12234678999999988777778889999999999999999999999987766555444433
Q ss_pred hhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 326 RPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
....... .....+..+|.++.-.+.-|-..--++-|...-+-+.+.-+.
T Consensus 237 ~EkK~s~----------~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 237 SEKKMST----------PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred HHhhcCC----------CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 2211110 011233456677888888899988999999887777665554
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=6e-24 Score=204.37 Aligned_cols=260 Identities=32% Similarity=0.480 Sum_probs=196.5
Q ss_pred CcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh---hHHHHHHHHHhccCCCC-CeeeEEeEEeccccC
Q 013504 99 FSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---HKEWVTEVNVLGVVEHP-NLVKLIGYCAEDDER 174 (441)
Q Consensus 99 f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~~ 174 (441)
|.....||.|+||.||++.+. ..+++|.+....... ...+.+|+.++..+.|+ +|+++++++.....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~- 72 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGS- 72 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCE-
Confidence 667788999999999999987 248888887655432 56788999999999988 79999999954443
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC-cEEEeec
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQ-ATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW-NAKLSDF 252 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~-~~kl~DF 252 (441)
.+++++|+.+++|.+++..... ..++......++.|++.++.|+|.. +++||||||+||+++..+ .++++||
T Consensus 73 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~df 146 (384)
T COG0515 73 ---LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDF 146 (384)
T ss_pred ---EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEecc
Confidence 4899999999999977765321 2788999999999999999999998 899999999999999998 7999999
Q ss_pred CCCCCCCCCCCcc----eeeceecccCcCCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCch-hHHHHHHh
Q 013504 253 GLARLGPSDGLSH----VSTAVVGTIGYAAPEYIQT---GRLTYKSDIWSFGVFLYELITGRRPLDRNRPK-SEQKLLEW 324 (441)
Q Consensus 253 Gla~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltG~~P~~~~~~~-~~~~~~~~ 324 (441)
|+++......... ......||..|++||.+.+ ..+....|+|++|++++++++|..||...... ........
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 226 (384)
T COG0515 147 GLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI 226 (384)
T ss_pred CcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHH
Confidence 9998554432221 3466899999999999987 57888999999999999999999997654431 01111111
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
+...... .................+.+++..|+..+|..|.+..+....
T Consensus 227 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 227 ILELPTP------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHhcCCc------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111110 000000000002233578899999999999999998887764
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=3.2e-26 Score=236.41 Aligned_cols=258 Identities=21% Similarity=0.287 Sum_probs=190.5
Q ss_pred cccceeecccceeEEEEEEcCCCCcccceeEEEEEc-cccCchh-hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCee
Q 013504 100 SRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQL-SRRGLQG-HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 100 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~-~~~~~~~-~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 177 (441)
....++|.|++|.|+...............++++ . ....... ...+..|+.+-..++|||++..+..+.+....
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~--- 396 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI--- 396 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc---
Confidence 4567899999998888776655443233333333 2 1111111 12266788888889999998887776665543
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
+-+||||++ +|..++.. ...+....+--++.|++.||.|||+. ||.||||||+|+++..+|.+||+|||.+..
T Consensus 397 -~~~mE~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~v 469 (601)
T KOG0590|consen 397 -LQSMEYCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASV 469 (601)
T ss_pred -hhhhhcccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCccee
Confidence 344999999 99999976 24688888999999999999999998 999999999999999999999999999886
Q ss_pred CCCCCCc--ceeeceecccCcCCccccccCCCCcc-ccchhHHHHHHHHHhCCCCCCCCCchhHHH-HHHhhhhhccccc
Q 013504 258 GPSDGLS--HVSTAVVGTIGYAAPEYIQTGRLTYK-SDIWSFGVFLYELITGRRPLDRNRPKSEQK-LLEWVRPHLTDAK 333 (441)
Q Consensus 258 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlG~il~elltG~~P~~~~~~~~~~~-~~~~~~~~~~~~~ 333 (441)
....... ......+|+..|+|||.+.+..|++. .||||.|++++.|++|+.||........+. .... .
T Consensus 470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~--------~ 541 (601)
T KOG0590|consen 470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY--------S 541 (601)
T ss_pred eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc--------c
Confidence 5444333 55677899999999999999999875 899999999999999999996543322211 0000 0
Q ss_pred chhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 334 KFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
. ..-...-.......++.....++.+||+.+|.+|.++++|++
T Consensus 542 ~--~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 542 D--QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred c--ccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0 000000011233356778889999999999999999999997
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.4e-25 Score=200.06 Aligned_cols=246 Identities=24% Similarity=0.423 Sum_probs=191.2
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLI 181 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv 181 (441)
+|.....|+.|+|++.+.. +++|++.-+.... .+.|..|.-.|+.+.||||+.++|.|..... +.++
T Consensus 197 kl~e~hsgelwrgrwqgnd-------ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppn----lv~i 265 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQGND-------IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPN----LVII 265 (448)
T ss_pred hhccCCCcccccccccCcc-------hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCC----ceEe
Confidence 4888899999999998765 5667766544322 3568889999999999999999999987753 4899
Q ss_pred EeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCC
Q 013504 182 YEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSD 261 (441)
Q Consensus 182 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 261 (441)
..||+.|+|+..|+...+...+..++.+++.+++.|+.|||+- .+-|.---|....+++|++...+|+ .+-+++
T Consensus 266 sq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kf---- 339 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKF---- 339 (448)
T ss_pred eeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-ccccee----
Confidence 9999999999999987667788899999999999999999986 3334455799999999999888775 222221
Q ss_pred CCcceeeceecccCcCCccccccCCCC---ccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhh
Q 013504 262 GLSHVSTAVVGTIGYAAPEYIQTGRLT---YKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMI 338 (441)
Q Consensus 262 ~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (441)
+.........|.||+||.++..+-+ .++|+|||++++|||.|...||....+.+..-.+
T Consensus 340 --sfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki---------------- 401 (448)
T KOG0195|consen 340 --SFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI---------------- 401 (448)
T ss_pred --eeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh----------------
Confidence 1112223557899999999876644 4689999999999999999999766543321111
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 339 LDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
--..++...++..+..+.+|+.-|+..||.+||.+..|+-.|++++
T Consensus 402 aleglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 402 ALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 0112334556677888999999999999999999999999998864
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1.4e-23 Score=190.06 Aligned_cols=176 Identities=11% Similarity=0.093 Sum_probs=133.4
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHH---------HHHHHHHhccCCCCCeeeE
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKE---------WVTEVNVLGVVEHPNLVKL 164 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~il~~l~hpnIv~l 164 (441)
...++|...++||.|+||.||+.... .. .++||.+.......... +.+|+..+.++.||+|..+
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~~--~~-----~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~ 100 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDTD--YG-----KYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL 100 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEecC--CC-----cEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence 45689999999999999999996542 22 39999997544332222 5789999999999999999
Q ss_pred EeEEeccccC----CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEE
Q 013504 165 IGYCAEDDER----GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240 (441)
Q Consensus 165 ~~~~~~~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NIL 240 (441)
.+++...... ....+|||||++|.+|.++.. ++. ....+++.+|..||.. |++||||||+||+
T Consensus 101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nil 167 (232)
T PRK10359 101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFI 167 (232)
T ss_pred eEeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEE
Confidence 9987654321 123589999999999988742 222 3456999999999998 9999999999999
Q ss_pred EcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHH
Q 013504 241 LDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304 (441)
Q Consensus 241 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 304 (441)
++.++ ++|+|||........... ..++....|+.++|+|+||+++..+.
T Consensus 168 i~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 168 VSKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EeCCC-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99988 999999988754322100 01334455778899999999988655
No 414
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.89 E-value=4.1e-24 Score=207.60 Aligned_cols=171 Identities=25% Similarity=0.353 Sum_probs=129.3
Q ss_pred EEEEEeccCCCChHHHHhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTS-RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
+||.|++|...+|.+||.. +.....++...+.++.|++.|+.| + +.+|||+||.||++..+..+||.|||+..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhee
Confidence 5788999999999999973 345667888999999999999999 5 89999999999999999999999999987
Q ss_pred CCCCCC----CcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhccc
Q 013504 257 LGPSDG----LSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTD 331 (441)
Q Consensus 257 ~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 331 (441)
...... .....+..+||..||+||.+.+..|+.++||||||+||+|+++ =..++...
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------------------ 466 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------------------ 466 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH------------------
Confidence 654443 1223456799999999999999999999999999999999997 22222110
Q ss_pred ccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHH
Q 013504 332 AKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374 (441)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 374 (441)
..+..+.+..+...+..+.+ .-..|+.+++...|.+||++.
T Consensus 467 -~t~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 467 -ATLTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred -HhhhhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCchHH
Confidence 01111112222111112222 344799999999999999443
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=9.5e-23 Score=182.22 Aligned_cols=139 Identities=13% Similarity=0.104 Sum_probs=105.5
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--h-------h-----------------HHHHHHHHHhcc
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--G-------H-----------------KEWVTEVNVLGV 155 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~il~~ 155 (441)
...||+|+||.||+|.+. ++. .||||+++..... . . .....|+.+|.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~-----~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGE-----ERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKR 75 (190)
T ss_pred CCccccccceEEEEEECC-CCC-----EEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 357999999999999875 333 4999998754211 0 0 112349999999
Q ss_pred CCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEeccc
Q 013504 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYL-HEGMDFQIIFRDF 234 (441)
Q Consensus 156 l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~iiHrDl 234 (441)
+.++++.....+... . .+|||||++|++|...+.. ...++...+..++.|++.+|.|| |+. +|+||||
T Consensus 76 l~~~~v~~p~~~~~~--~----~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 76 LVTAGIPCPEPILLK--S----HVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred HHHCCCCCCcEEEec--C----CEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 988776443332221 1 2899999998877655432 35788999999999999999999 676 9999999
Q ss_pred CCCcEEEcCCCcEEEeecCCCCCC
Q 013504 235 KSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 235 Kp~NILl~~~~~~kl~DFGla~~~ 258 (441)
||+|||++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 478999999999753
No 416
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.1e-23 Score=208.27 Aligned_cols=229 Identities=27% Similarity=0.363 Sum_probs=181.0
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHHHHHHHHHhccCC-CCCeeeEEeEEeccccCCeeEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDERGIQRLL 180 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~l 180 (441)
.+|.|.||.|+++.-.... ....-+|+|++.+..... ......|..++..++ ||.+|++.-.++.+... ++
T Consensus 1 vlg~g~~gkvfLvrk~~g~--da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl----~l 74 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGA--DAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKL----YL 74 (612)
T ss_pred CCCcCCCcchHHHHHhccc--cccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccch----hH
Confidence 3799999999986543322 223347777776543321 113346788888886 99999999888877654 99
Q ss_pred EEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 181 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
+++|..||.|...+.. ...+.+.....+...++.++.++|+. +|+|||+|++||+++.+|.+++.|||+++....
T Consensus 75 ~ld~~rgg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~ 149 (612)
T KOG0603|consen 75 ILDFLRGGDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVK 149 (612)
T ss_pred hhhhcccchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHh
Confidence 9999999999998876 46778888889999999999999988 999999999999999999999999999997544
Q ss_pred CCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcC
Q 013504 261 DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILD 340 (441)
Q Consensus 261 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (441)
... .+||..|||||++. .....+|+||||++++||+||..||.. +....+.
T Consensus 150 ~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il----------------- 200 (612)
T KOG0603|consen 150 EKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL----------------- 200 (612)
T ss_pred hhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh-----------------
Confidence 321 29999999999987 677889999999999999999999975 1111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHhhcccCCCCCCH
Q 013504 341 PKLEGKYSIKLAQKLAAVANKCLARQAKGRPKM 373 (441)
Q Consensus 341 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 373 (441)
+.....+...+..+.+++..++..+|.+|.-.
T Consensus 201 -~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 201 -KAELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred -hhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 11234566788889999999999999999765
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=2.7e-23 Score=215.32 Aligned_cols=247 Identities=22% Similarity=0.277 Sum_probs=175.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc----hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL----QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
+|...+.||++.|=+|.+|+++.+. |.||++-+... ...++-+.|+. ...++|||++++.-+...+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-------vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-------VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-------EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHH
Confidence 6778888999999999999876543 77888766542 22334445555 556799999998766544443
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
. |||-+|+ ..+|+|.|..+ .-+..-+...|+.|++.||..+|.. ||+|+|||.+||||+.-+.+.|+||.
T Consensus 96 A----ylvRqyv-khnLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFA 165 (1431)
T KOG1240|consen 96 A----YLVRQYV-KHNLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFA 165 (1431)
T ss_pred H----HHHHHHH-hhhhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccc
Confidence 3 7888888 56999998763 4567778899999999999999998 99999999999999999999999998
Q ss_pred CCCCC--CCCC---CcceeeceecccCcCCccccccC----------C-CCccccchhHHHHHHHHHh-CCCCCCCCCch
Q 013504 254 LARLG--PSDG---LSHVSTAVVGTIGYAAPEYIQTG----------R-LTYKSDIWSFGVFLYELIT-GRRPLDRNRPK 316 (441)
Q Consensus 254 la~~~--~~~~---~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DvwSlG~il~ellt-G~~P~~~~~~~ 316 (441)
.-+.. +.+. ......+...-.+|+|||.+... . .+++-||||+||+++||++ |++||.-.
T Consensus 166 sFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--- 242 (1431)
T KOG1240|consen 166 SFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--- 242 (1431)
T ss_pred ccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---
Confidence 76632 2211 11112222334479999987542 2 5778999999999999998 68888521
Q ss_pred hHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 317 SEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
++..+-+.. ......++.. + ....++.++..|++.||.+|.++++.|+.
T Consensus 243 ---QL~aYr~~~---~~~~e~~Le~-I-------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 243 ---QLLAYRSGN---ADDPEQLLEK-I-------EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ---HHHhHhccC---ccCHHHHHHh-C-------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 222221110 0000111100 0 11257899999999999999999999985
No 418
>PRK10345 hypothetical protein; Provisional
Probab=99.87 E-value=1.3e-21 Score=176.57 Aligned_cols=140 Identities=18% Similarity=0.238 Sum_probs=107.7
Q ss_pred cccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-----CCCCeeeEEeEEeccccC
Q 013504 100 SRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-----EHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 100 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~ 174 (441)
....+||+|+||.||. +..+.. .+||++........+.+.+|+.+++.+ .||||++++|++.++...
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~------k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~ 76 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQ------RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT 76 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcC------eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence 3456899999999995 433322 468887665444557789999999999 579999999999887543
Q ss_pred CeeEEEEEec--cCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCeEecccCCCcEEEcC----CCcE
Q 013504 175 GIQRLLIYEY--MPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGL-AYLHEGMDFQIIFRDFKSSNILLDE----QWNA 247 (441)
Q Consensus 175 ~~~~~lv~E~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~~~iiHrDlKp~NILl~~----~~~~ 247 (441)
+....+|||| +++|+|.+++.+ ..+++. ..++.+++.++ .|||++ +|+||||||+|||++. ++.+
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcE
Confidence 3333478999 557999999965 245555 35678888888 899998 9999999999999974 3479
Q ss_pred EEeecCCC
Q 013504 248 KLSDFGLA 255 (441)
Q Consensus 248 kl~DFGla 255 (441)
+|+||+.+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995544
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=9.9e-22 Score=176.12 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=108.3
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---------------------h-----hHHHHHHHHHhcc
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---------------------G-----HKEWVTEVNVLGV 155 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~il~~ 155 (441)
...||+|+||.||+|.+. ++. .||||++...... . ...+..|...+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~-----~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGE-----ELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR 75 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCC-----EEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 457999999999999876 333 4999998764211 0 1123578999999
Q ss_pred CCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccc
Q 013504 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHE-GMDFQIIFRDF 234 (441)
Q Consensus 156 l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrDl 234 (441)
+.|++|.....+.... .+|||||++|+++...... ...++......++.|++.+|.+||+ . ||+||||
T Consensus 76 l~~~~i~~p~~~~~~~------~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDl 144 (190)
T cd05145 76 LYEAGVPVPEPILLKK------NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDL 144 (190)
T ss_pred HHhCCCCCceEEEecC------CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 9999875554443322 2899999998865443222 2467788999999999999999999 7 9999999
Q ss_pred CCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 235 KSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 235 Kp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
||+|||++ ++.++|+|||++....
T Consensus 145 kP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 145 SEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred ChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999 7899999999998644
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.7e-21 Score=172.95 Aligned_cols=187 Identities=18% Similarity=0.115 Sum_probs=135.3
Q ss_pred cccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh----hHHHHHHHHHhccCC-CCCeeeEEeEEeccccC
Q 013504 100 SRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG----HKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDER 174 (441)
Q Consensus 100 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 174 (441)
.+...|++|+||+||.+...+ ..++.+.+.....-. ...+.+|+++|++|. |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~-------~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------ 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGE-------RKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------ 71 (218)
T ss_pred ccceeecCCCcceEEEeecCC-------ceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------
Confidence 456689999999999765421 125655555433211 124778999999994 58899998861
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc-CCCcEEEcCCCcEEEeecC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF-KSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl-Kp~NILl~~~~~~kl~DFG 253 (441)
..+++|||+.|.+|...+.. ....++.|++.+|.++|.+ ||+|||| ||+|||++.++.++|+|||
T Consensus 72 --~~~lvmeyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 72 --GRHLDRSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred --CEEEEEeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 13899999999998755421 1235788999999999998 9999999 7999999999999999999
Q ss_pred CCCCCCCCCCc----ce-------eeceecccCcCCccccccC-CCC-ccccchhHHHHHHHHHhCCCCCCCC
Q 013504 254 LARLGPSDGLS----HV-------STAVVGTIGYAAPEYIQTG-RLT-YKSDIWSFGVFLYELITGRRPLDRN 313 (441)
Q Consensus 254 la~~~~~~~~~----~~-------~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlG~il~elltG~~P~~~~ 313 (441)
++......... .. ..-..+++.|+.|+...-. ..+ ...++++.|+-+|.++|+..|+-..
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 99865433210 00 0112368888888854322 223 4578999999999999999887443
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=7e-22 Score=185.07 Aligned_cols=261 Identities=20% Similarity=0.272 Sum_probs=175.2
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCc------------------------------ccceeEEEEEccccCchh-h--
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDS------------------------------HKKIDIAVKQLSRRGLQG-H-- 143 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~------------------------------~~~~~vavK~~~~~~~~~-~-- 143 (441)
++|+++..||+|....||.+.....+.. .+..+.|||.+..-..+. .
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~~ 236 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDAH 236 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchHH
Confidence 5799999999999999999877652210 123456777765433221 1
Q ss_pred --HHHHHHH------HH-----------hc----c-CCCCCeeeEEeEEeccc-----------------------cCCe
Q 013504 144 --KEWVTEV------NV-----------LG----V-VEHPNLVKLIGYCAEDD-----------------------ERGI 176 (441)
Q Consensus 144 --~~~~~E~------~i-----------l~----~-l~hpnIv~l~~~~~~~~-----------------------~~~~ 176 (441)
+.+-+|. .. +. + -+|||||++.++|.+.- ..+.
T Consensus 237 iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~ 316 (598)
T KOG4158|consen 237 ILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPK 316 (598)
T ss_pred HHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCc
Confidence 1111221 01 11 1 26999999999887642 1234
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEE--cCCC--cEEEeec
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILL--DEQW--NAKLSDF 252 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl--~~~~--~~kl~DF 252 (441)
.+|+||..+ ..+|.+++.. ...+.....-|+.|+++|+.|||++ ||.|||+|.+|||| |+++ .+.|+||
T Consensus 317 tlylvMkrY-~~tLr~yl~~---~~~s~r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 317 TLYLVMKRY-RQTLREYLWT---RHRSYRTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred eEEEehhcc-hhhHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEccc
Confidence 679999887 4599999975 3455667778899999999999998 99999999999999 4443 4789999
Q ss_pred CCCCCCCCCCCc----ceeeceecccCcCCccccccCC------CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHH
Q 013504 253 GLARLGPSDGLS----HVSTAVVGTIGYAAPEYIQTGR------LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLL 322 (441)
Q Consensus 253 Gla~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~ 322 (441)
|++--....+.. ...-..-|.-.-||||+....+ .-.+.|.|+.|.+.||+++...||-.-. +...+.
T Consensus 390 GCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG-em~L~~- 467 (598)
T KOG4158|consen 390 GCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG-EMLLDT- 467 (598)
T ss_pred ceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc-hheech-
Confidence 987543321111 0111245777899999876432 1247999999999999999999995311 100000
Q ss_pred HhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHH
Q 013504 323 EWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVL 380 (441)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 380 (441)
..+.+.- -...+..+++.+.+++...|+.||.+|++..-....|
T Consensus 468 ----------r~Yqe~q----LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 468 ----------RTYQESQ----LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred ----------hhhhhhh----CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 0111111 1234456778899999999999999999976555544
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=5.4e-21 Score=178.37 Aligned_cols=237 Identities=22% Similarity=0.326 Sum_probs=149.6
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---hhHHHHHHHHHhccCCC----------CCeeeE
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---GHKEWVTEVNVLGVVEH----------PNLVKL 164 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~il~~l~h----------pnIv~l 164 (441)
.+...+.||.|+++.||.+++..+++. +|+|+....... ..+++.+|.-....+.+ -.++-.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~-----~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEE-----FAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEE-----EEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCce-----EEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 456677899999999999999888765 899887654422 34566666655554322 122222
Q ss_pred EeEEec---------cccC-Ce---eEEEEEeccCCCChHHHHh---hcCC--CCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 013504 165 IGYCAE---------DDER-GI---QRLLIYEYMPNRSVQDHLT---SRFQ--ATLPWNTRLKIAQDAARGLAYLHEGMD 226 (441)
Q Consensus 165 ~~~~~~---------~~~~-~~---~~~lv~E~~~~gsL~~~l~---~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~ 226 (441)
++.... .... .. +.+++|+-+ .++|.+++. .... ..+....++.+..|+++.+++||..
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-- 164 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-- 164 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc--
Confidence 222211 1100 01 347788877 678888754 2211 1233445567778999999999998
Q ss_pred CCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccC--------CCCccccchhHHH
Q 013504 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTG--------RLTYKSDIWSFGV 298 (441)
Q Consensus 227 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~DvwSlG~ 298 (441)
||+|+||||+|+|++.+|.++|+||+........ ......+..|.|||..... .++.+.|.|+||+
T Consensus 165 -GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~-----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 165 -GLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR-----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp -TEEEST-SGGGEEE-TTS-EEE--GGGEEETTEE-----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred -ceEecccceeeEEEcCCCCEEEcChHHHeecCce-----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 9999999999999999999999999877643221 1113456789999976442 4688899999999
Q ss_pred HHHHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCC
Q 013504 299 FLYELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGR 370 (441)
Q Consensus 299 il~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 370 (441)
++|.|++|..||+...+..... . .+ ..+. +.++.+..||..+|+.+|++|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~------------~--------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPE------------W--------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSG------------G--------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCcccccc------------c--------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999999999997543211100 0 11 1233 788999999999999999987
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=9.7e-21 Score=199.80 Aligned_cols=252 Identities=18% Similarity=0.208 Sum_probs=177.8
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC---CCCeeeEEeEEecc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE---HPNLVKLIGYCAED 171 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~ 171 (441)
..+.|.+.+.||+|+||.||+|...+ ++ .||+|+-+....- +|.-=.+++.+|+ -+-|+.+.......
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~-----~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GK-----LVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-Cc-----EEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 34678899999999999999999776 32 4999997765432 1111122333333 23344444333333
Q ss_pred ccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEc-------CC
Q 013504 172 DERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLD-------EQ 244 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~-------~~ 244 (441)
+.. +||+||.+.|+|.+++.. .+.+++..++.++.|++..+..||.. +|||+||||+|+||. ++
T Consensus 767 ~~S----~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 767 NAS----VLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred Ccc----eeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcc
Confidence 333 899999999999999974 67899999999999999999999998 999999999999993 23
Q ss_pred CcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHh
Q 013504 245 WNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEW 324 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~ 324 (441)
-.++|+|||.+-..............++|-.+-.+|+..|..++..+|.|.|+-+++-||.|+.-=
T Consensus 838 ~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------------- 903 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------------- 903 (974)
T ss_pred cceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--------------
Confidence 458999999987543333334556788999999999999999999999999999999999987421
Q ss_pred hhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHHhhh
Q 013504 325 VRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 387 (441)
..++ ....++..+......+... ++...+|..|-..=|...++...|+..+...
T Consensus 904 ----~~~g--~~~~~~~~~~Ry~~~~~W~---~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 904 ----VKNG--SSWMVKTNFPRYWKRDMWN---KFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred ----hcCC--cceeccccchhhhhHHHHH---HHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 0000 0011111122222233444 4444555555555588888888888877543
No 424
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=1.1e-20 Score=187.08 Aligned_cols=219 Identities=28% Similarity=0.460 Sum_probs=163.2
Q ss_pred hccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 013504 153 LGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFR 232 (441)
Q Consensus 153 l~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHr 232 (441)
|+.+.|.|+.+++|.+.+... .++|.+||..|+|.+.+... ...+++.....++++|+.||.|||.. +-..|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~----~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPE----MIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNS--PIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCc----eEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcC--cceeee
Confidence 467899999999999998743 48999999999999999763 56789999999999999999999986 223999
Q ss_pred ccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCC-------CCccccchhHHHHHHHHHh
Q 013504 233 DFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGR-------LTYKSDIWSFGVFLYELIT 305 (441)
Q Consensus 233 DlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlG~il~ellt 305 (441)
.+++.|.+++....+||+|||+.................-..-|.|||.+.... .+.+.||||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 999999999999999999999988764211111122223445699999987642 4567999999999999999
Q ss_pred CCCCCCCCCchhH-HHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHH
Q 013504 306 GRRPLDRNRPKSE-QKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLNKIV 384 (441)
Q Consensus 306 G~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 384 (441)
...||+....... .+++..+.... .....|.+... .+..+.+..++..||..+|.+||++..|-..+..+.
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~------~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGG------SNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcC------CCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9999975332221 33444332200 01111221111 144557899999999999999999999998887765
Q ss_pred hh
Q 013504 385 DA 386 (441)
Q Consensus 385 ~~ 386 (441)
..
T Consensus 226 ~~ 227 (484)
T KOG1023|consen 226 KG 227 (484)
T ss_pred cc
Confidence 43
No 425
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.84 E-value=2e-21 Score=201.39 Aligned_cols=216 Identities=25% Similarity=0.408 Sum_probs=150.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCe
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 176 (441)
.+|..+++|-.|+||.||...++.+... +|+| +++.+.. .+- +|.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqr-----fa~k-iNkq~li-----lRn--ilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQR-----FAMK-INKQNLI-----LRN--ILTFAGNPFVV-------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccc-----hhhc-ccccchh-----hhc--cccccCCccee--------------
Confidence 6899999999999999999998877654 7773 3332211 110 22222333333
Q ss_pred eEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 177 QRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 177 ~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
|+-...++. -+.++... +.+++|||+. +|+|||+||+|.+|+.-|.+|++|||+++
T Consensus 136 -----------gDc~tllk~--~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 136 -----------GDCATLLKN--IGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred -----------chhhhhccc--CCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhh
Confidence 343444433 23444332 7899999987 99999999999999999999999999988
Q ss_pred CCCCCCCc-------------ceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHH
Q 013504 257 LGPSDGLS-------------HVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLE 323 (441)
Q Consensus 257 ~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~ 323 (441)
...-.... .....++|||.|+|||++....|+..+|||++|+|+||.+.|+.||++..+++....+-
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi 271 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 271 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh
Confidence 64221100 11234689999999999999999999999999999999999999998876654332211
Q ss_pred hhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 324 WVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
.+...+.+ -....+.++.+++.++|+.+|.+|--....++
T Consensus 272 ------sd~i~wpE---------~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e 311 (1205)
T KOG0606|consen 272 ------SDDIEWPE---------EDEALPPEAQDLIEQLLRQNPLCRLGTGGALE 311 (1205)
T ss_pred ------hhhccccc---------cCcCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence 11111110 12235578999999999999999954434333
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=2.3e-19 Score=165.86 Aligned_cols=142 Identities=15% Similarity=0.130 Sum_probs=108.5
Q ss_pred CCcccceeecccceeEEEEE-EcCCCCcccceeEEEEEccccCch------------------------hhHHHHHHHHH
Q 013504 98 NFSRSLMIGEGGFGGVYRGV-IRSTEDSHKKIDIAVKQLSRRGLQ------------------------GHKEWVTEVNV 152 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~-~~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~i 152 (441)
-|.+.+.||+|+||.||+|. +..++. .||+|.+...... ....+.+|+.+
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 103 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGK-----ERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN 103 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCc-----EEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence 48889999999999999998 433433 4999998753210 01234679999
Q ss_pred hccCCCC--CeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-e
Q 013504 153 LGVVEHP--NLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQ-I 229 (441)
Q Consensus 153 l~~l~hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-i 229 (441)
+.++.+. .+.+++++ . . .+|||||++|++|...+.. ...+.......++.|++.+|.+||+. + |
T Consensus 104 L~~L~~~~i~~p~~~~~---~-~----~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 104 LQRLYEAGVPVPKPIAW---R-R----NVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred HHHHHhcCCCCCeeeEe---c-C----ceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 9999753 34444432 1 1 2899999999888776533 23556667789999999999999998 8 9
Q ss_pred EecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 230 IFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 230 iHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
+||||||+||+++ ++.++|+|||.+...
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999999999 889999999998753
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=6.1e-19 Score=160.70 Aligned_cols=134 Identities=20% Similarity=0.345 Sum_probs=108.2
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--------hhHHHHHHHHHhccCCCCCeeeEEeEEeccccC
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--------GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 174 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 174 (441)
+.||+|++|.||+|.+.+.. +++|+....... ....+.+|+.++..+.|++|.....++.....
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~-------~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~- 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIK-------AVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN- 73 (211)
T ss_pred cccccCceEEEEEEeeCCCc-------eEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC-
Confidence 46999999999999874332 788875533211 12356789999999999998777766655443
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCC
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGL 254 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGl 254 (441)
.++||||++|++|.+++... . . ....++.+++.+|.+||+. +++|+|++|.|||++ ++.++|+|||+
T Consensus 74 ---~~lv~e~~~G~~L~~~~~~~--~---~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 74 ---FIIVMEYIEGEPLKDLINSN--G---M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred ---CEEEEEEeCCcCHHHHHHhc--c---H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 38999999999999998642 1 1 7889999999999999998 999999999999999 78899999998
Q ss_pred CCC
Q 013504 255 ARL 257 (441)
Q Consensus 255 a~~ 257 (441)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 874
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.79 E-value=6.1e-19 Score=182.67 Aligned_cols=139 Identities=18% Similarity=0.315 Sum_probs=109.4
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEcccc--Cc------hhhHHHHHHHHHhccCCCCCeeeEE
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR--GL------QGHKEWVTEVNVLGVVEHPNLVKLI 165 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~il~~l~hpnIv~l~ 165 (441)
.....|...+.||+|+||.||+|.+.... +++|+.... .. ....++.+|+.++..++|++|+...
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-------~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGRD-------AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCcc-------ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 33455677889999999999999876543 222221111 00 1124678999999999999998887
Q ss_pred eEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC
Q 013504 166 GYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW 245 (441)
Q Consensus 166 ~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~ 245 (441)
.++...... ++||||++|++|.+++. ....++.+++.+|.+||+. +|+||||||+|||+ .++
T Consensus 403 ~~~~~~~~~----~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~ 464 (535)
T PRK09605 403 IYDVDPEEK----TIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDD 464 (535)
T ss_pred EEEEeCCCC----EEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECC
Confidence 776654433 89999999999999885 3467899999999999998 99999999999999 677
Q ss_pred cEEEeecCCCCC
Q 013504 246 NAKLSDFGLARL 257 (441)
Q Consensus 246 ~~kl~DFGla~~ 257 (441)
.++|+|||+++.
T Consensus 465 ~~~liDFGla~~ 476 (535)
T PRK09605 465 RLYLIDFGLGKY 476 (535)
T ss_pred cEEEEeCccccc
Confidence 899999999985
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=1.3e-18 Score=157.10 Aligned_cols=130 Identities=19% Similarity=0.363 Sum_probs=101.7
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--------hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--------GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
+||+|+||.||+|.+.+. .+++|........ ...++.+|+.++..+.|+++.....++.....
T Consensus 1 ~ig~G~~~~vy~~~~~~~-------~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-- 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGL-------KAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN-- 71 (199)
T ss_pred CCCCCceEEEEEeecCCc-------cEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC--
Confidence 489999999999985432 3888875543211 12456789999999988875554444444333
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.++||||++|++|.+++... .. .++.+++.+|.+||+. +++|+|++|.||+++ ++.++++|||++
T Consensus 72 --~~lv~e~~~g~~l~~~~~~~--~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 72 --KTIVMEYIEGKPLKDVIEEG--ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred --CEEEEEEECCccHHHHHhhc--HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 38999999999999987542 11 7899999999999998 999999999999999 789999999998
Q ss_pred CC
Q 013504 256 RL 257 (441)
Q Consensus 256 ~~ 257 (441)
+.
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 75
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.75 E-value=6.5e-18 Score=152.46 Aligned_cols=143 Identities=16% Similarity=0.124 Sum_probs=106.9
Q ss_pred HHHHHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch----------------------hhHHHHH
Q 013504 91 ELKTATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ----------------------GHKEWVT 148 (441)
Q Consensus 91 ~~~~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~ 148 (441)
++......|.+.+.||+|+||.||+|.... +. .||||++...... ....+.+
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~-g~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPD-GN-----PVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQK 82 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCC-CC-----EEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHH
Confidence 333333458888999999999999998752 32 4999986543200 0112567
Q ss_pred HHHHhccCCCC--CeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 013504 149 EVNVLGVVEHP--NLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMD 226 (441)
Q Consensus 149 E~~il~~l~hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 226 (441)
|+.++..+.|+ .++..++. .. .++||||++|++|...... .....++.+++.++.++|+.
T Consensus 83 E~~~l~~l~~~~i~v~~~~~~----~~----~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~-- 144 (198)
T cd05144 83 EFAALKALYEEGFPVPKPIDW----NR----HAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH-- 144 (198)
T ss_pred HHHHHHHHHHcCCCCCceeec----CC----ceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC--
Confidence 88899988777 44444432 11 2899999999998765431 34567889999999999997
Q ss_pred CCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 227 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
+|+||||||+||++++++.++|+|||++...
T Consensus 145 -gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 145 -GIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred -CCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999999999999654
No 431
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.73 E-value=4.9e-17 Score=150.58 Aligned_cols=139 Identities=20% Similarity=0.225 Sum_probs=104.9
Q ss_pred cceee-cccceeEEEEEEcCCCCcccceeEEEEEccccCc-------------hhhHHHHHHHHHhccCCCCCe--eeEE
Q 013504 102 SLMIG-EGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-------------QGHKEWVTEVNVLGVVEHPNL--VKLI 165 (441)
Q Consensus 102 ~~~LG-~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~il~~l~hpnI--v~l~ 165 (441)
...|| .||.|+||.+...+. .++||.+..... .....+.+|+.++.++.|++| +..+
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~-------~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl 108 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGV-------NWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPI 108 (239)
T ss_pred CceeecCCCCccEEEEEeCCc-------eEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeE
Confidence 34688 889999999876532 378887754221 122457889999999998875 6777
Q ss_pred eEEeccccCCeeEEEEEeccCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC
Q 013504 166 GYCAEDDERGIQRLLIYEYMPN-RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 166 ~~~~~~~~~~~~~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~ 244 (441)
++...........++||||++| .+|.+++.. ..++.. .+.+|+.+|.+||+. ||+||||||.|||++.+
T Consensus 109 ~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 109 AARVVRHGLFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPD 178 (239)
T ss_pred eeeeeecCcceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC
Confidence 7655443322233699999997 699988854 345443 367899999999998 99999999999999999
Q ss_pred CcEEEeecCCCCC
Q 013504 245 WNAKLSDFGLARL 257 (441)
Q Consensus 245 ~~~kl~DFGla~~ 257 (441)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 9999999998875
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1e-18 Score=180.84 Aligned_cols=257 Identities=23% Similarity=0.317 Sum_probs=189.5
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccC--chhhHHHHHHHHHhccCC-CCCeeeEEeEEeccccC
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG--LQGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDER 174 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~ 174 (441)
.|...+-||+|+|+.|-......... ..+|+|.+.... .........|..+-..+. |+|++.+++.....+..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~----~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~ 96 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPE----SSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY 96 (601)
T ss_pred cccccccccccccchhhhhhhcCCCc----ceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccc
Confidence 45556669999999998776533322 236667666554 122234445777777776 99999999887776644
Q ss_pred CeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEecccCCCcEEEcCCC-cEEEeec
Q 013504 175 GIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQIIFRDFKSSNILLDEQW-NAKLSDF 252 (441)
Q Consensus 175 ~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~iiHrDlKp~NILl~~~~-~~kl~DF 252 (441)
+++++|..|+++.+.+........+...+-.++.|+..++.|+| .. ++.||||||+|.+++..+ .++++||
T Consensus 97 ----~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df 169 (601)
T KOG0590|consen 97 ----LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADF 169 (601)
T ss_pred ----ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCc
Confidence 88999999999999883222225666778889999999999999 76 999999999999999999 9999999
Q ss_pred CCCCCCCC-CCCcceeeceec-ccCcCCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhc
Q 013504 253 GLARLGPS-DGLSHVSTAVVG-TIGYAAPEYIQTGR-LTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 253 Gla~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
|+|..... .+........+| ++.|+|||...+.. .....|+||.|+++.-+++|..|++........ ...|....
T Consensus 170 ~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~~~~- 247 (601)
T KOG0590|consen 170 GLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWKSNK- 247 (601)
T ss_pred hhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeecccc-
Confidence 99997766 555555666788 99999999988754 466789999999999999999999755433211 11111000
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
................+++.+++..+|..|.+.+++-.
T Consensus 248 -----------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 -----------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred -----------cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00011122345566788999999999999999887765
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.70 E-value=2e-16 Score=135.35 Aligned_cols=136 Identities=21% Similarity=0.233 Sum_probs=110.1
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCC--CCeeeEEeEEeccccCCeeE
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEH--PNLVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~~~~ 178 (441)
+.+.||+|.++.||++..... .+++|....... ...+.+|+.++..++| .++++++++....+ ..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~-------~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~----~~ 68 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDE-------DYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDG----WS 68 (155)
T ss_pred cceecccccccceEEEEecCC-------eEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC----cc
Confidence 456799999999999987542 389998866543 4567889999999976 58999888776543 34
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
+++|||++++.+..+ +......++.+++.+|.+||.....+++|+|++|.||+++..+.++++|||.++..
T Consensus 69 ~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 69 YLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred EEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 999999998877644 44566788999999999999853347999999999999999899999999998753
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=2.4e-16 Score=140.79 Aligned_cols=135 Identities=19% Similarity=0.141 Sum_probs=93.8
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh--hHH----------------------HHHHHHHhccCC
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG--HKE----------------------WVTEVNVLGVVE 157 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~il~~l~ 157 (441)
.+.||+|+||.||+|.+. ++ ..||||++....... ... ...|...+..+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~-----~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 75 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DG-----EPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY 75 (187)
T ss_pred CcccccccceeEEEEECC-CC-----CEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence 457999999999999876 22 249999876532111 111 124555666654
Q ss_pred CC--CeeeEEeEEeccccCCeeEEEEEeccCCCChHHH-HhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEecc
Q 013504 158 HP--NLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH-LTSRFQATLPWNTRLKIAQDAARGLAYLHE-GMDFQIIFRD 233 (441)
Q Consensus 158 hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~iiHrD 233 (441)
+. .+.+.+++. ..++||||++++++... +... ... ..+..++.+++.++.++|. . +|+|||
T Consensus 76 ~~~~~~~~~~~~~--------~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 76 EAGVPVPKPIDLN--------RHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred HcCCCCCceEecC--------CCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 33 244444321 13899999999554322 2111 011 5678899999999999998 6 999999
Q ss_pred cCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 234 FKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 234 lKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
|||+||+++ ++.++|+|||.+...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 889999999999754
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=4.3e-15 Score=136.83 Aligned_cols=206 Identities=23% Similarity=0.270 Sum_probs=143.8
Q ss_pred HHhccCCCCCeeeEEeEEecccc-CCeeEEEEEeccCCCChHHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 013504 151 NVLGVVEHPNLVKLIGYCAEDDE-RGIQRLLIYEYMPNRSVQDHLTS--RFQATLPWNTRLKIAQDAARGLAYLHEGMDF 227 (441)
Q Consensus 151 ~il~~l~hpnIv~l~~~~~~~~~-~~~~~~lv~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 227 (441)
.-|-.+.|-|||+++.|+.+... ......+++||+..|+|..+|++ +.+..+....-.+|+-||+.||.|||+. ++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 34555679999999999877544 23345788999999999999974 3456788888889999999999999985 88
Q ss_pred CeEecccCCCcEEEcCCCcEEEeecCCCCCCCC--CCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHh
Q 013504 228 QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS--DGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELIT 305 (441)
Q Consensus 228 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt 305 (441)
.|+|+++..+.|++..+|-+|+.--.-...... ...........+-++|.+||.=...+.+.++|||+||+..++|..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999999999999999999888752111100000 001111223456789999998666677889999999999999998
Q ss_pred CCCCCCCC-CchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 306 GRRPLDRN-RPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 306 G~~P~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
|..--... ........+......+.+ ..-..++..|++.+|..||+|.+++.
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~~len---------------------~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVIIGLEN---------------------GLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcceeehhhhhhhheeeccC---------------------ccccCcCcccccCCCCCCcchhhhhc
Confidence 87543221 111111111111001111 11236889999999999999999876
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=2.4e-14 Score=142.30 Aligned_cols=250 Identities=24% Similarity=0.263 Sum_probs=179.5
Q ss_pred cCCcccceeec--ccceeEEEEEE--cCCCCcccceeEEEEEccccCc--hhhHHHHHHHHHhccC-CCCCeeeEEeEEe
Q 013504 97 KNFSRSLMIGE--GGFGGVYRGVI--RSTEDSHKKIDIAVKQLSRRGL--QGHKEWVTEVNVLGVV-EHPNLVKLIGYCA 169 (441)
Q Consensus 97 ~~f~~~~~LG~--G~~g~Vy~~~~--~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 169 (441)
..|.+...+|. |.+|.||.+.. ..... .+|+|.-+.... .....-++|+.-..++ .|+|.++.+..+.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~-----~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPH-----KFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCc-----ccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence 45777788999 99999999887 33333 378877333222 2223345677777777 5999999888887
Q ss_pred ccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCeEecccCCCcEEEcCC-
Q 013504 170 EDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR----GLAYLHEGMDFQIIFRDFKSSNILLDEQ- 244 (441)
Q Consensus 170 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~~~iiHrDlKp~NILl~~~- 244 (441)
..+.. |+-+|+| +.+|..+.... ...++....+.++.+... ||.++|+. +++|-|+||.||+...+
T Consensus 189 ~~~~l----fiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~ 259 (524)
T KOG0601|consen 189 GSGIL----FIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDW 259 (524)
T ss_pred cCCcc----eeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccc
Confidence 76654 8888988 57888887654 345788888999999999 99999998 99999999999999999
Q ss_pred CcEEEeecCCCCCCCCCCCcce---eeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH
Q 013504 245 WNAKLSDFGLARLGPSDGLSHV---STAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL 321 (441)
Q Consensus 245 ~~~kl~DFGla~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~ 321 (441)
..++++|||+............ .....|...|++||..+ +-++...|+|++|.++.+..+|..+........
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~---- 334 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS---- 334 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC----
Confidence 8899999999987665542221 12236778899999864 578889999999999999999876653221100
Q ss_pred HHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHH
Q 013504 322 LEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVE 378 (441)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 378 (441)
|. .+..-.+...+...-..++...+..+++.+|..|++.+.+..
T Consensus 335 --W~-----------~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 --WS-----------QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --cc-----------ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 10 000000111222233445666999999999999999877765
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49 E-value=1.2e-13 Score=138.86 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=94.6
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh------------------------------H--------
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH------------------------------K-------- 144 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------~-------- 144 (441)
+.||+|++|.||+|+..++. .||||+......... +
T Consensus 123 ~plasaSigQVh~A~l~~G~------~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGK------EVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred cceeeeehhheEEEEecCCC------EEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 57999999999999986532 499999764321100 0
Q ss_pred --HHHHHHHHhccC----CCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHH-H
Q 013504 145 --EWVTEVNVLGVV----EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAAR-G 217 (441)
Q Consensus 145 --~~~~E~~il~~l----~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-~ 217 (441)
.+.+|...+.++ +|.+-+.+..++.+... ..+|||||++|++|.++..... ... ....++..++. .
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~---~~vLvmE~i~G~~L~~~~~~~~-~~~---~~~~ia~~~~~~~ 269 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTS---ERVLTMEWIDGIPLSDIAALDE-AGL---DRKALAENLARSF 269 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcC---CceEEEEeECCcccccHHHHHh-cCC---CHHHHHHHHHHHH
Confidence 133455554444 23333333333332211 2389999999999998765321 122 23456666655 4
Q ss_pred HHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 218 LAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 218 L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+..+|.. |++|+|+||.||+++.++.++|+|||++....
T Consensus 270 l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 270 LNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 6788887 99999999999999999999999999987643
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.44 E-value=4.9e-13 Score=117.24 Aligned_cols=131 Identities=18% Similarity=0.124 Sum_probs=93.3
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCee-eEEeEEeccccCCeeEEE
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLV-KLIGYCAEDDERGIQRLL 180 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~~~~l 180 (441)
++.|+.|.++.||++...+ ..+++|....... ....+..|+.++..+.+.+++ +++.+.. .. .++
T Consensus 3 ~~~l~~G~~~~vy~~~~~~-------~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~----~~l 68 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVAN-------KKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ET----GVL 68 (170)
T ss_pred eeecCCcccCceEEEEECC-------eEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CC----CeE
Confidence 3568999999999988642 2389998755431 123456899999988655544 4444332 21 289
Q ss_pred EEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 181 IYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGM--DFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 181 v~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
||||++|.++.... .....++.+++.+|..||... ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 69 v~e~i~G~~l~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 69 ITEFIEGSELLTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred EEEecCCCcccccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 99999998876430 111345678999999999872 12369999999999999 66899999998764
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.37 E-value=2.3e-12 Score=131.25 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=92.1
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh----------------------------------
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG---------------------------------- 142 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------------------- 142 (441)
.+|+. +.||+|++|+||+|+++.++. .||||+....-...
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~-----~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~ 193 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGR-----EVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF 193 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCC-----EEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence 35666 689999999999999987444 39999987432100
Q ss_pred hH------HHHHHHHHhccC----CCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCC----CCCHHHHH
Q 013504 143 HK------EWVTEVNVLGVV----EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQA----TLPWNTRL 208 (441)
Q Consensus 143 ~~------~~~~E~~il~~l----~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~----~l~~~~~~ 208 (441)
.+ .+.+|+..+.++ .+.+.+.+-.++.+-.. ..+|||||++|+.+.+.-.-...+ .+....+.
T Consensus 194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st---~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~ 270 (537)
T PRK04750 194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCS---ETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVE 270 (537)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCC---CceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHH
Confidence 01 133444444444 24444444444432111 248999999999998753211111 12222333
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCC----cEEEeecCCCCCCCC
Q 013504 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQW----NAKLSDFGLARLGPS 260 (441)
Q Consensus 209 ~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~----~~kl~DFGla~~~~~ 260 (441)
.++.|+. .. |++|+|+||.||+++.++ .++++|||++.....
T Consensus 271 ~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3344433 34 999999999999999888 999999999886644
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.34 E-value=1.1e-11 Score=110.07 Aligned_cols=141 Identities=15% Similarity=0.111 Sum_probs=96.1
Q ss_pred ceeecccceeEEEEEEcCCC-CcccceeEEEEEccccCc--h-------------------h-hHHH----HHHHHHhcc
Q 013504 103 LMIGEGGFGGVYRGVIRSTE-DSHKKIDIAVKQLSRRGL--Q-------------------G-HKEW----VTEVNVLGV 155 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~-~~~~~~~vavK~~~~~~~--~-------------------~-~~~~----~~E~~il~~ 155 (441)
..||.|--+.||.|...... .......+|||+.+.... + . .+.+ .+|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999754310 011233589998753110 0 0 1112 379999998
Q ss_pred CCC--CCeeeEEeEEeccccCCeeEEEEEeccCCCChHH-HHhhcCCCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCeEe
Q 013504 156 VEH--PNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQD-HLTSRFQATLPWNTRLKIAQDAARGLAYL-HEGMDFQIIF 231 (441)
Q Consensus 156 l~h--pnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~~~iiH 231 (441)
+.. -++...+++ . .. +|||||+.++.+.. .+.. ..++......+..+++.+|..| |.. +|||
T Consensus 83 l~~~Gv~vP~pi~~--~--~~----~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~---glVH 148 (197)
T cd05146 83 MQKAGIPCPEVVVL--K--KH----VLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVH 148 (197)
T ss_pred HHHcCCCCCeEEEe--c--CC----EEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 843 456666654 2 22 89999997654422 2222 2445556678889999999998 776 9999
Q ss_pred cccCCCcEEEcCCCcEEEeecCCCCCC
Q 013504 232 RDFKSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 232 rDlKp~NILl~~~~~~kl~DFGla~~~ 258 (441)
+||++.|||+++ +.+.|+|||.+...
T Consensus 149 GDLs~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 149 ADLSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CCCCHHHEEEEC-CcEEEEECCCceeC
Confidence 999999999974 67999999988754
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.34 E-value=2.6e-11 Score=122.16 Aligned_cols=160 Identities=16% Similarity=0.244 Sum_probs=118.2
Q ss_pred EEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHH
Q 013504 130 IAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLK 209 (441)
Q Consensus 130 vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~ 209 (441)
|.|...............+-+.-|+.++||||+++++.+..++ ..|||+|.+. .|..++.+. .......
T Consensus 40 vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~----~~ylvTErV~--Pl~~~lk~l-----~~~~v~~ 108 (690)
T KOG1243|consen 40 VSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG----TLYLVTERVR--PLETVLKEL-----GKEEVCL 108 (690)
T ss_pred eEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC----ceEEEeeccc--cHHHHHHHh-----HHHHHHH
Confidence 7777766655433345667788899999999999999888776 3599999873 677777653 2556677
Q ss_pred HHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCc
Q 013504 210 IAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTY 289 (441)
Q Consensus 210 i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 289 (441)
-+.||+.||.|||..+ +++|++|.-+.|+++..|..||++|-++........ ......---.|..|+.+.... -
T Consensus 109 Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~ 182 (690)
T KOG1243|consen 109 GLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--W 182 (690)
T ss_pred HHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--c
Confidence 7899999999999653 899999999999999999999999988764322211 111122223456666543322 4
Q ss_pred cccchhHHHHHHHHHhC
Q 013504 290 KSDIWSFGVFLYELITG 306 (441)
Q Consensus 290 ~~DvwSlG~il~elltG 306 (441)
..|.|.|||+++|++.|
T Consensus 183 s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 183 SIDSWGLGCLIEELFNG 199 (690)
T ss_pred chhhhhHHHHHHHHhCc
Confidence 56999999999999998
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.33 E-value=3e-13 Score=141.34 Aligned_cols=248 Identities=19% Similarity=0.218 Sum_probs=166.4
Q ss_pred cCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc---hhhHHHHHHHHHhccCCCCCeeeEEeEEecccc
Q 013504 97 KNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL---QGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDE 173 (441)
Q Consensus 97 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 173 (441)
+.|.+..-+-+|.++.++.+.-...+.. .++|....... ...+....+-.++-..++|.++...--+.-..
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~-----~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs- 877 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHT-----RPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS- 877 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccc-----cchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCC-
Confidence 4455555677788888887665555432 23333222111 11222233334444445666665543322222
Q ss_pred CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecC
Q 013504 174 RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFG 253 (441)
Q Consensus 174 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFG 253 (441)
..+|||+|+.+++|...|+.- +..+.+.....+..+..+++|||.. .+.|||++|.|+|+..++..+++|||
T Consensus 878 ---P~~L~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~ 949 (1205)
T KOG0606|consen 878 ---PLPLVGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFG 949 (1205)
T ss_pred ---CcchhhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccc
Confidence 348999999999999999763 4566667777888899999999986 69999999999999999999999998
Q ss_pred CCCCCCCC-----------------------------CCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHH
Q 013504 254 LARLGPSD-----------------------------GLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELI 304 (441)
Q Consensus 254 la~~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 304 (441)
........ ..........||+.|.+||.+.+......+|+|++|++++|.+
T Consensus 950 t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 950 TLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred cccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhh
Confidence 43221100 0001233568999999999999999999999999999999999
Q ss_pred hCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCC-CCcchHHHHHHHHHHHHHhhcccCCCCCCHH
Q 013504 305 TGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKL-EGKYSIKLAQKLAAVANKCLARQAKGRPKMS 374 (441)
Q Consensus 305 tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 374 (441)
+|.+||....+.... +.+ ..... ....+...+....+++...+..+|.+|-.+.
T Consensus 1030 ~g~pp~na~tpq~~f---~ni-------------~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIF---ENI-------------LNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cCCCCCCCcchhhhh---hcc-------------ccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 999999765543221 111 00000 0112234556788999999999999997765
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=1.6e-12 Score=129.49 Aligned_cols=247 Identities=20% Similarity=0.189 Sum_probs=172.5
Q ss_pred hcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHH--HHHHHHHhccC-CCCCeeeEEeEEeccc
Q 013504 96 TKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKE--WVTEVNVLGVV-EHPNLVKLIGYCAEDD 172 (441)
Q Consensus 96 ~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~E~~il~~l-~hpnIv~l~~~~~~~~ 172 (441)
..+|..+..||.|.|+.|+....+..++ ..+++|.+.+.......+ -+.|+.+...+ -|.+++.++..+....
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~----~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGD----CIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCC----ceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 4579999999999999999987553322 237888776544333222 24677777766 5888888776666555
Q ss_pred cCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCC-CcEEEee
Q 013504 173 ERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQ-WNAKLSD 251 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~-~~~kl~D 251 (441)
.. |+--|||+++++...+.- ...+++...+.+..|++.++.++|+. .++|+|+||+||++..+ +..++.|
T Consensus 340 ~~----~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~ 410 (524)
T KOG0601|consen 340 QG----YIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGD 410 (524)
T ss_pred cc----cCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccc
Confidence 43 788899999998877632 45678888999999999999999987 99999999999999876 7789999
Q ss_pred cCCCCCCCCCCCcceeeceecccCcC--CccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHHHHhhhhhc
Q 013504 252 FGLARLGPSDGLSHVSTAVVGTIGYA--APEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKLLEWVRPHL 329 (441)
Q Consensus 252 FGla~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~~~~~~~~~ 329 (441)
||+....... .....++.+++ ++.......+..+.|++|||.-+.+.++|..--.... +|..
T Consensus 411 ~~~~t~~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~~--- 474 (524)
T KOG0601|consen 411 FGCWTRLAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSLT--- 474 (524)
T ss_pred ccccccccee-----cccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------ccee---
Confidence 9988642211 22233444555 4555556678889999999999999998864322110 0110
Q ss_pred ccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHH
Q 013504 330 TDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEVLN 381 (441)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 381 (441)
+. .......+ .....+..+.+.+...++..||.+.++.....
T Consensus 475 --------i~-~~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 475 --------IR-SGDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred --------ee-cccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 00 00001111 22266778888999999999999887766443
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.28 E-value=5.6e-11 Score=101.83 Aligned_cols=143 Identities=21% Similarity=0.250 Sum_probs=102.2
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-----h---hhHHHHHHHHHhccCCCCCeeeEEeEEeccc
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-----Q---GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDD 172 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----~---~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 172 (441)
...+|-+|+-+.|+++.+.+.. ..||.-....+ . ..++..+|+++|.+++--.|.-..-++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~-------~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEA-------AIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY 83 (229)
T ss_pred cceeeeccceeeEeeeccCCce-------eEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 5567899999999999876543 33443222111 1 1245678999999886444444444555544
Q ss_pred cCCeeEEEEEeccCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc---EE
Q 013504 173 ERGIQRLLIYEYMPN-RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN---AK 248 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~---~k 248 (441)
.. .|+|||++| .++.+++...............++..|-..|.-||.+ +|||+||..+||+|..++. +.
T Consensus 84 ~~----~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GG----QIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CC----eEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 43 899999977 5888888765444444444478899999999999998 9999999999999965543 58
Q ss_pred EeecCCCCC
Q 013504 249 LSDFGLARL 257 (441)
Q Consensus 249 l~DFGla~~ 257 (441)
++|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999864
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=6e-11 Score=102.12 Aligned_cols=130 Identities=22% Similarity=0.343 Sum_probs=95.3
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCch--------hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCC
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ--------GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERG 175 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 175 (441)
.+++|+-+.+|.+.+.+.. +.+|.-...... ...+-.+|+.+|.+++--.|...+=|..+.+..
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-------av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~- 74 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-------AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNG- 74 (204)
T ss_pred hhhCCcceeEEeeeccCcc-------eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-
Confidence 5789999999998764432 444442222211 123456899999988655554444445555543
Q ss_pred eeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 176 IQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 176 ~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.|+|||++|..|.+.+... ...++..|-.-+.-||.. +|+|+||.++||++...+ +.++|||++
T Consensus 75 ---~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg 138 (204)
T COG3642 75 ---LIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLG 138 (204)
T ss_pred ---EEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcc
Confidence 7999999999999898653 256777888888999998 999999999999998775 999999998
Q ss_pred CC
Q 013504 256 RL 257 (441)
Q Consensus 256 ~~ 257 (441)
..
T Consensus 139 ~~ 140 (204)
T COG3642 139 EF 140 (204)
T ss_pred cc
Confidence 75
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.20 E-value=2.1e-10 Score=104.87 Aligned_cols=146 Identities=19% Similarity=0.244 Sum_probs=106.8
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-hhhHHHHHHHHHhccCCC--CCeeeEEeEEeccccCCeeEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-QGHKEWVTEVNVLGVVEH--PNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~~~~~ 179 (441)
+.||.|..+.||++...++ ..+++|....... .....+..|+.++..+.+ .++.+++.+....... ...+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g------~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~-~~~~ 76 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGG------RRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVL-GTPF 76 (223)
T ss_pred eecCCCccceEEEEEecCC------cceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCcc-CCce
Confidence 4689999999999986541 2388998765432 134567889999999865 3457777776543211 1238
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGM---------------------------------- 225 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------------------- 225 (441)
+||||++|.+|.+.+.. ..++......++.+++.+|..||+..
T Consensus 77 ~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 77 YVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 99999999988776532 35677777788888888888888520
Q ss_pred -------------------CCCeEecccCCCcEEEcC--CCcEEEeecCCCCCC
Q 013504 226 -------------------DFQIIFRDFKSSNILLDE--QWNAKLSDFGLARLG 258 (441)
Q Consensus 226 -------------------~~~iiHrDlKp~NILl~~--~~~~kl~DFGla~~~ 258 (441)
...++|+|+.|.||+++. ++.+.|+||+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 246799999999999998 666899999988753
No 447
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.19 E-value=9.4e-10 Score=107.82 Aligned_cols=218 Identities=16% Similarity=0.229 Sum_probs=152.3
Q ss_pred ceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCC-C
Q 013504 110 FGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPN-R 188 (441)
Q Consensus 110 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~-g 188 (441)
-.+.|++....++.. |.+|++.............-+++++++.|+|||++.++|.........+++|++|.++ +
T Consensus 289 ~~Ttyk~~s~~DG~~-----YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 289 SITTYKATSNVDGNA-----YVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred cceeEeeeeccCCce-----eeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 356789988777665 8889885444443434445688999999999999999998665555567999999886 6
Q ss_pred ChHHHHhhc-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 189 SVQDHLTSR-------------FQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 189 sL~~~l~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
+|.+..... .+...++...|.++.|+..||.++|+. |+..+-|.|.+||++.+..++|+..|+.
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccce
Confidence 888765321 123567889999999999999999998 9999999999999999999999988877
Q ss_pred CCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCchhHHHH-HHhhhhhcccccc
Q 013504 256 RLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLDRNRPKSEQKL-LEWVRPHLTDAKK 334 (441)
Q Consensus 256 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~~~~~~~~~~~-~~~~~~~~~~~~~ 334 (441)
.....+. . |-+.+ -.+-|.=.||.+++.|.||..--.... ..++. ..
T Consensus 441 Dvl~~d~--------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d--~~~~s~~~----------- 488 (655)
T KOG3741|consen 441 DVLQEDP--------------T--EPLES---QQQNDLRDLGLLLLALATGTENSNRTD--STQSSHLT----------- 488 (655)
T ss_pred eeecCCC--------------C--cchhH---HhhhhHHHHHHHHHHHhhccccccccc--chHHHHHH-----------
Confidence 6544331 0 11111 134688899999999999965421111 00110 11
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 335 FTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
.....++.++.+++.-....++++ -+..+++.+
T Consensus 489 -----------~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 489 -----------RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred -----------HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 112245566667777777777765 556666554
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.09 E-value=8.7e-09 Score=98.83 Aligned_cols=267 Identities=16% Similarity=0.216 Sum_probs=160.5
Q ss_pred cccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC-CCCCeeeEEeE----EeccccC
Q 013504 100 SRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV-EHPNLVKLIGY----CAEDDER 174 (441)
Q Consensus 100 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~----~~~~~~~ 174 (441)
..++-||+|+-+.+|-.-.-.+ .+.|+.......... .-+..|... .||-+..-+.+ ....+.
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d--------~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~- 81 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD--------QVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRR- 81 (637)
T ss_pred CCCccccCCccceeeecchhhc--------hhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCc-
Confidence 4556799999999995422111 233555543322222 223334443 56644331111 111111
Q ss_pred CeeEEEEEeccCCC-ChHHHHh---h-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEE
Q 013504 175 GIQRLLIYEYMPNR-SVQDHLT---S-RFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKL 249 (441)
Q Consensus 175 ~~~~~lv~E~~~~g-sL~~~l~---~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl 249 (441)
+...-++|..+.|. ....++. . +......|...++.++.++.+..-||.. |.+-+|+.++|+|+.+++.+.|
T Consensus 82 ~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~L 158 (637)
T COG4248 82 GKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVL 158 (637)
T ss_pred cceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEE
Confidence 11134677777664 2222221 1 1124578999999999999999999988 8999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeeceecccCcCCccccc-----cCCCCccccchhHHHHHHHHHhC-CCCCCCCCc-----hh-
Q 013504 250 SDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQ-----TGRLTYKSDIWSFGVFLYELITG-RRPLDRNRP-----KS- 317 (441)
Q Consensus 250 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltG-~~P~~~~~~-----~~- 317 (441)
.|=..-..... ....-..+|.+.|.+||.-. +..-+...|.|.||++++++|.| ++||.+... ..
T Consensus 159 VdsDsfqi~~n---g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~ 235 (637)
T COG4248 159 VDSDSFQINAN---GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPL 235 (637)
T ss_pred EcccceeeccC---CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcc
Confidence 97543332211 22334568999999999644 34456789999999999999986 999965321 11
Q ss_pred HHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcc--cCCCCCCHHHHHHHHHHHHhhh
Q 013504 318 EQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLAR--QAKGRPKMSEVVEVLNKIVDAA 387 (441)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~~~~~~ 387 (441)
+..+... .+....+...-..+.-...-..-+++.+..+..+|+.. ++.-||+++..+..|..+.++.
T Consensus 236 E~~Ia~g---~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 236 ETDIAHG---RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred hhhhhcc---eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 1111111 01111110000001101111124567889999999964 3678999999999888876543
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.09 E-value=1.9e-09 Score=101.17 Aligned_cols=110 Identities=13% Similarity=0.099 Sum_probs=82.0
Q ss_pred HHHHHHHHhccCCCC--CeeeEEeEEeccccC-CeeEEEEEeccCCC-ChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 013504 145 EWVTEVNVLGVVEHP--NLVKLIGYCAEDDER-GIQRLLIYEYMPNR-SVQDHLTSRFQATLPWNTRLKIAQDAARGLAY 220 (441)
Q Consensus 145 ~~~~E~~il~~l~hp--nIv~l~~~~~~~~~~-~~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~ 220 (441)
.+.+|...+.+|..- .++..+++....... ...-+||||++++. +|.+++........+......++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 477899988887432 333445555332111 12348999999886 89999864323455667778999999999999
Q ss_pred HhhCCCCCeEecccCCCcEEEcC-------CCcEEEeecCCCCC
Q 013504 221 LHEGMDFQIIFRDFKSSNILLDE-------QWNAKLSDFGLARL 257 (441)
Q Consensus 221 LH~~~~~~iiHrDlKp~NILl~~-------~~~~kl~DFGla~~ 257 (441)
||.. ||+|+|+++.|||++. ++.+.|+||+.++.
T Consensus 154 LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 154 MHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 9998 9999999999999975 46799999998863
No 450
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.00 E-value=9e-09 Score=93.27 Aligned_cols=109 Identities=25% Similarity=0.257 Sum_probs=86.0
Q ss_pred HHHHHHHHHhccCC--CCCeeeEEeEEeccccCCeeEEEEEeccCCC-ChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 013504 144 KEWVTEVNVLGVVE--HPNLVKLIGYCAEDDERGIQRLLIYEYMPNR-SVQDHLTSRFQATLPWNTRLKIAQDAARGLAY 220 (441)
Q Consensus 144 ~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~ 220 (441)
....+|...+..|. .=.+...+++..........-+||+|++++. +|.+++.... ..+......++.+++..+.-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHHH
Confidence 46778888887774 3345566666665443334558999999884 8999987632 26667788999999999999
Q ss_pred HhhCCCCCeEecccCCCcEEEcCCC---cEEEeecCCCCC
Q 013504 221 LHEGMDFQIIFRDFKSSNILLDEQW---NAKLSDFGLARL 257 (441)
Q Consensus 221 LH~~~~~~iiHrDlKp~NILl~~~~---~~kl~DFGla~~ 257 (441)
||.. ||+|+|+++.|||++.++ .+.|+||+-++.
T Consensus 134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9998 999999999999998887 899999998775
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.97 E-value=4.6e-09 Score=93.08 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=64.1
Q ss_pred HHHHHHHhccCCCC--CeeeEEeEEeccccCCeeEEEEEeccC--CCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH-
Q 013504 146 WVTEVNVLGVVEHP--NLVKLIGYCAEDDERGIQRLLIYEYMP--NRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAY- 220 (441)
Q Consensus 146 ~~~E~~il~~l~hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~- 220 (441)
..+|.+.|.++..- ++.+++++- .. +|||||++ |..+..+... .++......++.+++..+..
T Consensus 55 ~~~E~~~L~~l~~~Gv~vP~p~~~~--~~------~ivME~I~~~G~~~~~l~~~----~~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 55 AKKEFRNLKRLYEAGVPVPKPYDYN--RN------VIVMEYIGEDGVPLPRLKDV----DLSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHCCCTT-SS--EEEEE--TT------EEEEE--EETTEEGGCHHHC----GGGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCccCCcEEEEe--CC------EEEEEecCCCccchhhHHhc----cccchhHHHHHHHHHHHHHHH
Confidence 46799999999765 456665442 22 89999998 5555443322 22234566778888886665
Q ss_pred HhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 221 LHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 221 LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
+|.. ||+|+||.+.|||++++ .+.|+|||.+..
T Consensus 123 ~~~~---givHGDLs~~NIlv~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 123 LHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp HHCT---TEEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred HHhc---CceecCCChhhEEeecc-eEEEEecCccee
Confidence 4666 99999999999999988 999999998764
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.91 E-value=3.3e-08 Score=88.24 Aligned_cols=143 Identities=19% Similarity=0.135 Sum_probs=104.0
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccC------chhhHHHHHHHHHhccCCC--CCeeeEEeEEeccccCCe
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG------LQGHKEWVTEVNVLGVVEH--PNLVKLIGYCAEDDERGI 176 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~~~~ 176 (441)
-|+||.+.|+.-...+. .+-+|.-.... ......|.+|+..|.+|.. -.+.+...+.........
T Consensus 26 ~~rgG~SgV~r~~~~g~-------~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~ 98 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-------KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEW 98 (216)
T ss_pred cCCCCcceEEEEEeCCc-------EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCce
Confidence 47799999998776543 27777754211 1134678999999998842 235555422223333334
Q ss_pred eEEEEEeccCC-CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCc--EEEeecC
Q 013504 177 QRLLIYEYMPN-RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWN--AKLSDFG 253 (441)
Q Consensus 177 ~~~lv~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~--~kl~DFG 253 (441)
.-+||+|-++| .+|.+++....-.+.+......++.+|+..|.-||.. |+.|+|+.+.|||++.++. ++++||.
T Consensus 99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 56899997754 6899998664334567777889999999999999998 9999999999999986667 9999998
Q ss_pred CCCC
Q 013504 254 LARL 257 (441)
Q Consensus 254 la~~ 257 (441)
-++.
T Consensus 176 k~r~ 179 (216)
T PRK09902 176 KSRR 179 (216)
T ss_pred ccch
Confidence 7764
No 453
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.84 E-value=8.2e-10 Score=111.89 Aligned_cols=150 Identities=21% Similarity=0.332 Sum_probs=105.8
Q ss_pred HHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCC-------cceeeceecccCcCCccccccC
Q 013504 213 DAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGL-------SHVSTAVVGTIGYAAPEYIQTG 285 (441)
Q Consensus 213 qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~ 285 (441)
+++.||.|+|.. .++||++|.|++|.++.++..||+.|+.+........ ........-...|.|||++.+.
T Consensus 107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 345999999975 5899999999999999999999999998765433111 0111123445679999999988
Q ss_pred CCCccccchhHHHHHHHHHh-CCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhc
Q 013504 286 RLTYKSDIWSFGVFLYELIT-GRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLA 364 (441)
Q Consensus 286 ~~~~~~DvwSlG~il~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 364 (441)
..+.++|+||+||++|.+.. |+.-+............. . .+..-...+..+++.++.+-+.+++.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~----~----------~~~~~~~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR----N----------LLNAGAFGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh----c----------ccccccccccccCcHHHHHHHHHHhc
Confidence 88999999999999999995 444444332221111110 0 11111123445788899999999999
Q ss_pred ccCCCCCCHHHHHH
Q 013504 365 RQAKGRPKMSEVVE 378 (441)
Q Consensus 365 ~dP~~RPs~~evl~ 378 (441)
.++.-||++..+..
T Consensus 251 ~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 251 GDSAVRPTLDLLLS 264 (700)
T ss_pred CCcccCcchhhhhc
Confidence 99999997766654
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.82 E-value=3.6e-08 Score=90.10 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=93.1
Q ss_pred CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch----------------------hhHHHHHHHHHhcc
Q 013504 98 NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ----------------------GHKEWVTEVNVLGV 155 (441)
Q Consensus 98 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~il~~ 155 (441)
=..++..||-|.-+.||.|...... +++||.-+.-... ......+|.++|.+
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~------~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~ 165 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGR------KVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQR 165 (304)
T ss_pred HHhhccccccCccceEEEEECCCCC------EEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHH
Confidence 3556778999999999999876433 4888874321000 11235689999999
Q ss_pred CCCC--CeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecc
Q 013504 156 VEHP--NLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233 (441)
Q Consensus 156 l~hp--nIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrD 233 (441)
|.-. .|.+.+++- .-.+||||++|-.|...- ++....-.++..|+.-+.-+-.. ||||+|
T Consensus 166 L~~~G~~VP~P~~~n--------RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~---GiVHGD 227 (304)
T COG0478 166 LYPEGVKVPKPIAWN--------RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR---GIVHGD 227 (304)
T ss_pred hhhcCCCCCCccccc--------cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc---CccccC
Confidence 8644 566655432 128999999986665432 12333444555555555544444 999999
Q ss_pred cCCCcEEEcCCCcEEEeecCCCCC
Q 013504 234 FKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 234 lKp~NILl~~~~~~kl~DFGla~~ 257 (441)
+.+-||+++++|.+.++||-.+..
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred CchheEEEecCCCEEEEeCccccc
Confidence 999999999999999999986654
No 455
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.52 E-value=1.4e-06 Score=78.98 Aligned_cols=154 Identities=16% Similarity=0.117 Sum_probs=99.0
Q ss_pred ccchHHHHHHhcCCcccceeec---ccceeEEEEEEcCCCCcccceeEEEEEccccCchh-------------------h
Q 013504 86 VFTFSELKTATKNFSRSLMIGE---GGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-------------------H 143 (441)
Q Consensus 86 ~~~~~~~~~~~~~f~~~~~LG~---G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------~ 143 (441)
..+++.+....+...+..+.|. |.-+.||+|..... ..+|||+........ .
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~------~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~r 107 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDG------RYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNR 107 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCC------ceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCH
Confidence 3456666666677766666554 55567999875322 249999976432211 0
Q ss_pred HH-----HHHHHHHhccCC--CCCeeeEEeEEeccccCCeeEEEEEeccCCC-ChHHHHhhcCCCCCCHHHHHHHHHHHH
Q 013504 144 KE-----WVTEVNVLGVVE--HPNLVKLIGYCAEDDERGIQRLLIYEYMPNR-SVQDHLTSRFQATLPWNTRLKIAQDAA 215 (441)
Q Consensus 144 ~~-----~~~E~~il~~l~--hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~ 215 (441)
++ ...|+.-|.++. +-.+.+-+++.. -.|||||+... .-.-.|.. .++.......+..+++
T Consensus 108 r~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~--------nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v 176 (268)
T COG1718 108 RKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRN--------NVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVV 176 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCceeecC--------CeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHH
Confidence 11 135777777763 344455554442 18999999543 11111221 2333346778888899
Q ss_pred HHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCC
Q 013504 216 RGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGP 259 (441)
Q Consensus 216 ~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 259 (441)
+.+.-|-.. .++||+||..-|||+. ++.+.|+|||.|....
T Consensus 177 ~~~~~l~~~--a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 177 EYMRRLYKE--AGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHHHHHHHh--cCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999888763 2999999999999999 7799999999887543
No 456
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.48 E-value=1.2e-08 Score=102.49 Aligned_cols=190 Identities=21% Similarity=0.152 Sum_probs=131.1
Q ss_pred HhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCC-eeeEEeEEecccc
Q 013504 95 ATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPN-LVKLIGYCAEDDE 173 (441)
Q Consensus 95 ~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~ 173 (441)
.+..+....-+++|+++++||.+-..+.- ...+.+... ....-++++|.+++||| .+..++-+..++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaekl------L~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~- 307 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKL------LQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGED- 307 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhh------eeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCccc-
Confidence 34445555568999999999875433221 224443322 34456889999999999 555444433333
Q ss_pred CCeeEEEEEeccCCC-ChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeec
Q 013504 174 RGIQRLLIYEYMPNR-SVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDF 252 (441)
Q Consensus 174 ~~~~~~lv~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DF 252 (441)
...++|+++.++ +........ ...+...+...+.+.-+++|++||+. .=+||| ||+..+ +..+..||
T Consensus 308 ---~~~i~~~i~s~~rs~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~ 375 (829)
T KOG0576|consen 308 ---YLWIPMRICSTGRSSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDF 375 (829)
T ss_pred ---ccchhhhhhcCCccccccCChh-hHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccc
Confidence 347889999877 222211110 12233445566777778999999975 458998 777766 57899999
Q ss_pred CCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 013504 253 GLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYELITGRRPLD 311 (441)
Q Consensus 253 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltG~~P~~ 311 (441)
+....+.... ...+..+|+.++|||+...+.+....|+|++|+-..++--|-+|-.
T Consensus 376 ~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 376 AVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 9987665432 3456789999999999999999999999999998788887877754
No 457
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.47 E-value=1.6e-06 Score=79.61 Aligned_cols=145 Identities=19% Similarity=0.210 Sum_probs=83.0
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCC--CeeeEEeEEeccccCCeeEE
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHP--NLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~~~~~~~~~~~ 179 (441)
++.|+.|..+.||+....+ + .+++|..... .....+.+|..+++.+... .+.+++.+.......+ ..+
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~------~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~-~~~ 71 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-G------RYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNG-FPY 71 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-S------EEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETS-EEE
T ss_pred CccCCCCCeeeEEEEEECC-c------EEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccc-cce
Confidence 3578999999999998765 2 3889987554 3446677898888887432 3566666553333322 358
Q ss_pred EEEeccCCCChHH----------------HHh---hc--CCCCCCHHH---------HHHH------------HHHHHH-
Q 013504 180 LIYEYMPNRSVQD----------------HLT---SR--FQATLPWNT---------RLKI------------AQDAAR- 216 (441)
Q Consensus 180 lv~E~~~~gsL~~----------------~l~---~~--~~~~l~~~~---------~~~i------------~~qi~~- 216 (441)
++|++++|..+.. .+. .. ....+.... .... ...+..
T Consensus 72 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (239)
T PF01636_consen 72 LLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEER 151 (239)
T ss_dssp EEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred EEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999988877 111 11 001111110 0000 111222
Q ss_pred HHHHHhh----CCCCCeEecccCCCcEEEc-CCCcEEEeecCCCC
Q 013504 217 GLAYLHE----GMDFQIIFRDFKSSNILLD-EQWNAKLSDFGLAR 256 (441)
Q Consensus 217 ~L~~LH~----~~~~~iiHrDlKp~NILl~-~~~~~kl~DFGla~ 256 (441)
.+..++. .....++|+|+.|.|||++ .++.+.|+||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 152 LLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 2333332 1234799999999999999 66666899998765
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.46 E-value=8.8e-07 Score=90.14 Aligned_cols=143 Identities=18% Similarity=0.132 Sum_probs=89.3
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhh------------------------------H--------
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGH------------------------------K-------- 144 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------~-------- 144 (441)
.-|+.++-|+||+|++..+. .||||+....-.... .
T Consensus 131 ~PiAsASIaQVH~A~L~sG~------~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGE------EVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred CchhhhhHhhheeEEecCCC------EEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 46899999999999998743 499999764221100 0
Q ss_pred --HHHHHHHHhccC----CCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 013504 145 --EWVTEVNVLGVV----EHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGL 218 (441)
Q Consensus 145 --~~~~E~~il~~l----~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L 218 (441)
.+.+|..-+.++ +...-+.+-.++.+-.. ..+|+|||++|-.+.+...-+. ..++...+.....++.--.
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~---~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q 280 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTT---RRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQ 280 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccC---CcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence 123444444443 22222333333332111 2389999999999988853221 4455333333333322222
Q ss_pred HHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 219 AYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 219 ~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
-+-| |++|.|..|-||+++.+|.+.+.|||+......
T Consensus 281 ~~~d-----gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 281 LLRD-----GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHhc-----CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2223 899999999999999999999999999876544
No 459
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.45 E-value=3.8e-06 Score=75.45 Aligned_cols=143 Identities=12% Similarity=0.095 Sum_probs=91.0
Q ss_pred HHhcCCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHH---------HHHHHHhccCC---CCCe
Q 013504 94 TATKNFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEW---------VTEVNVLGVVE---HPNL 161 (441)
Q Consensus 94 ~~~~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~il~~l~---hpnI 161 (441)
....+|...+++-.....-|.+-...+. .+.+|..........+.| .+++..+.+++ --..
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~~~-------kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~ 100 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEIDGK-------KYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEP 100 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEECCc-------EEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccc
Confidence 3557888888888877777777655443 278888765443322222 24444444442 2233
Q ss_pred eeEEeEEecccc-CCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEE
Q 013504 162 VKLIGYCAEDDE-RGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNIL 240 (441)
Q Consensus 162 v~l~~~~~~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NIL 240 (441)
+.++.+..-... .....+|||||++|..|.+... ++. .++..+..++.-||.. |++|+|..|.|++
T Consensus 101 ~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFl 167 (229)
T PF06176_consen 101 ADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFL 167 (229)
T ss_pred ccceeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEE
Confidence 333322222111 1123368999999988876542 222 3456677889999998 9999999999999
Q ss_pred EcCCCcEEEeecCCCCC
Q 013504 241 LDEQWNAKLSDFGLARL 257 (441)
Q Consensus 241 l~~~~~~kl~DFGla~~ 257 (441)
++++ .++++||+..+.
T Consensus 168 v~~~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 168 VSNN-GIRIIDTQGKRM 183 (229)
T ss_pred EECC-cEEEEECccccc
Confidence 9965 499999987653
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.39 E-value=5.6e-06 Score=76.07 Aligned_cols=139 Identities=18% Similarity=0.163 Sum_probs=79.3
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCC--eeeEEeEEeccccCCeeEEE
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPN--LVKLIGYCAEDDERGIQRLL 180 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~~~~~~~l 180 (441)
..||+|..+.||+.. +. .+++|...... ......+|.++++.+..-+ +.+.+++....+. ..+
T Consensus 7 ~~i~~G~t~~~y~~~----~~-----~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~----~gl 71 (226)
T TIGR02172 7 TQTGEGGNGESYTHK----TG-----KWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGR----LGL 71 (226)
T ss_pred eeecCCCCcceeEec----CC-----CEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCe----eee
Confidence 468999999999831 11 26777765432 2345678999998885333 4556666644443 368
Q ss_pred EEeccCCCC-hHHHH---------------------hhcCCCCCCHHHHH-HHHH----------HHHH-HHHHHhhC-C
Q 013504 181 IYEYMPNRS-VQDHL---------------------TSRFQATLPWNTRL-KIAQ----------DAAR-GLAYLHEG-M 225 (441)
Q Consensus 181 v~E~~~~gs-L~~~l---------------------~~~~~~~l~~~~~~-~i~~----------qi~~-~L~~LH~~-~ 225 (441)
|||+++|.+ +...+ +.......+..... .+.. .+.. ...+|... .
T Consensus 72 v~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 151 (226)
T TIGR02172 72 IYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPD 151 (226)
T ss_pred eeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCC
Confidence 999998864 21111 10000011111100 0000 0111 11222211 1
Q ss_pred CCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 226 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
...++|+|+.|.||++++++ +.|+||+.+..
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 23578999999999999888 99999998764
No 461
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.35 E-value=1.4e-05 Score=71.18 Aligned_cols=100 Identities=24% Similarity=0.305 Sum_probs=80.4
Q ss_pred HHHHHhccCCC-CCeeeEEeEEeccccCCeeEEEEEeccCCCChHHH---HhhcCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013504 148 TEVNVLGVVEH-PNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDH---LTSRFQATLPWNTRLKIAQDAARGLAYLHE 223 (441)
Q Consensus 148 ~E~~il~~l~h-pnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~---l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 223 (441)
.|.-+|..+.+ +++.+++|+|.. ++|.||...+++... +.+ -...+|..+.+|+.+++..+.+|+.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~--------~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR--------FYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC--------EEEEEeecCcccccccccccc--ccccCHHHHHHHHHHHHHHHHHHhc
Confidence 57888888865 699999999942 789999987766421 111 1246899999999999999999998
Q ss_pred CCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 224 GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 224 ~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.....+.-.|++|+|+-+++++.+|++|...+..
T Consensus 78 ~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred CCCCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence 6433577799999999999999999999987654
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.30 E-value=1.1e-05 Score=74.97 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=79.5
Q ss_pred eecccc-eeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-CCCeeeEEeEEeccccCCeeEEEEE
Q 013504 105 IGEGGF-GGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-HPNLVKLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 105 LG~G~~-g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~lv~ 182 (441)
|-.|.. ..||+....+ . .+.+|...... ...+.+|+.+++.+. +--+.+++++....+. .++||
T Consensus 6 ~~~g~~~~~v~~~~~~~-~------~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~----~~lv~ 71 (244)
T cd05150 6 VTEGQSGATVYRLDGKN-P------GLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGR----AWLLT 71 (244)
T ss_pred cCCCCCcCeEEEEcCCC-C------cEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCc----cEEEE
Confidence 334444 7899886432 2 27788775543 334667998888873 4445667766654432 38999
Q ss_pred eccCCCChHHHH-------------------hhcC--CCCCCHH--HHHHHHH--------------------HHHHHHH
Q 013504 183 EYMPNRSVQDHL-------------------TSRF--QATLPWN--TRLKIAQ--------------------DAARGLA 219 (441)
Q Consensus 183 E~~~~gsL~~~l-------------------~~~~--~~~l~~~--~~~~i~~--------------------qi~~~L~ 219 (441)
|+++|.+|.... +... ..++... ....... .+...+.
T Consensus 72 e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (244)
T cd05150 72 SAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYA 151 (244)
T ss_pred EeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHH
Confidence 999998776432 1000 0011100 0000000 0111112
Q ss_pred HHhh----CCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 220 YLHE----GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 220 ~LH~----~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.|-. ...+.++|+|+.|.|||++.+..+.|+||+.+..
T Consensus 152 ~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 152 ELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred HHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 2211 1124689999999999999987788999997764
No 463
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.30 E-value=1.5e-05 Score=70.73 Aligned_cols=139 Identities=24% Similarity=0.318 Sum_probs=95.3
Q ss_pred CCccccchHHHHHHhcCCcccceeecccc-eeEEEEEEcCCCCcccceeEEEEEccc---cCc-----------------
Q 013504 82 SNLRVFTFSELKTATKNFSRSLMIGEGGF-GGVYRGVIRSTEDSHKKIDIAVKQLSR---RGL----------------- 140 (441)
Q Consensus 82 ~~~~~~~~~~~~~~~~~f~~~~~LG~G~~-g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~----------------- 140 (441)
..+..|+. .+.+++..+.||.|.- |.||++...+. .+|+|.+.. ...
T Consensus 27 PKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I~g~-------~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (207)
T PF13095_consen 27 PKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEIDGR-------IYALKLFRFWDYTEPDYTRERFAGHETSLSTP 94 (207)
T ss_pred CCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEECCe-------EEEEEEeeccccCCCccccccccccccccchh
Confidence 34555555 2278999999999999 99999988664 399999321 100
Q ss_pred -hhhHHHHHHHHHhccC---CCCCe--eeEEeEEeccc--------------cCCeeEEEEEeccCCCChHHHHhhcCCC
Q 013504 141 -QGHKEWVTEVNVLGVV---EHPNL--VKLIGYCAEDD--------------ERGIQRLLIYEYMPNRSVQDHLTSRFQA 200 (441)
Q Consensus 141 -~~~~~~~~E~~il~~l---~hpnI--v~l~~~~~~~~--------------~~~~~~~lv~E~~~~gsL~~~l~~~~~~ 200 (441)
....-|..|.+...+| .+.++ |+++||..-.. .....+-||.||++...
T Consensus 95 ~~y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------- 163 (207)
T PF13095_consen 95 AHYADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------- 163 (207)
T ss_pred hhhcChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------
Confidence 0112467788887776 45566 99999985431 11223467888876543
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCC
Q 013504 201 TLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLA 255 (441)
Q Consensus 201 ~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla 255 (441)
.+. ..-+.+|..-|..+|.. ||+-+|+++.|.. .-+|+|||.+
T Consensus 164 ~~~----~~~~~~~~~dl~~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 164 PLQ----IRDIPQMLRDLKILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ccc----hhHHHHHHHHHHHHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 111 23356677888899987 9999999999985 2389999864
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.24 E-value=6.2e-06 Score=83.80 Aligned_cols=143 Identities=18% Similarity=0.136 Sum_probs=87.3
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchh-------------------------------hH------H
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQG-------------------------------HK------E 145 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~------~ 145 (441)
+.||.-+.|.||+|+.++.. .||||+-+..-... .+ .
T Consensus 167 ~piaaASlaQVhrA~L~~G~------~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGE------DVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred chhhhcchhheEEEEecCCC------EEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 46999999999999998843 39999865422110 00 1
Q ss_pred HHHHHHHh----ccCCCCC---eeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 013504 146 WVTEVNVL----GVVEHPN---LVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGL 218 (441)
Q Consensus 146 ~~~E~~il----~~l~hpn---Iv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L 218 (441)
|.+|.+-. +.++|-+ -|.+-.++.+-.. .+.|+||||+|..+.+.-.-. ...++...+..-+.++..-+
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st---~RVLtME~~~G~~i~Dl~~i~-~~gi~~~~i~~~l~~~~~~q 316 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLST---KRVLTMEYVDGIKINDLDAID-KRGISPHDILNKLVEAYLEQ 316 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhcCc---ceEEEEEecCCccCCCHHHHH-HcCCCHHHHHHHHHHHHHHH
Confidence 23343322 2334555 1222223322211 359999999998777653211 13455555444444443333
Q ss_pred HHHhhCCCCCeEecccCCCcEEEcC----CCcEEEeecCCCCCCCC
Q 013504 219 AYLHEGMDFQIIFRDFKSSNILLDE----QWNAKLSDFGLARLGPS 260 (441)
Q Consensus 219 ~~LH~~~~~~iiHrDlKp~NILl~~----~~~~kl~DFGla~~~~~ 260 (441)
-+.| |++|.|-.|-||+++. ++.+.+-|||+......
T Consensus 317 If~~-----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 317 IFKT-----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHhc-----CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 3333 8999999999999984 67799999999876543
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.20 E-value=1e-05 Score=69.61 Aligned_cols=130 Identities=17% Similarity=0.192 Sum_probs=86.4
Q ss_pred cccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEE
Q 013504 100 SRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRL 179 (441)
Q Consensus 100 ~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 179 (441)
...+.||+|++|.||+|.+.+.. +|+|+-.... ....+..|+++|..+.--++.+=+ |+...+ +
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~~~~-------~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~v-y~yg~~------~ 88 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWRGGE-------VALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEV-YFYGED------F 88 (201)
T ss_pred hhhhhhhcccccEEEEeeccCce-------EEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceE-EEechh------h
Confidence 34567999999999999987653 8888865543 346778899999998766655433 222222 5
Q ss_pred EEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccC-CCcEEEcCCCcEEEeecCCCCC
Q 013504 180 LIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFK-SSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 180 lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlK-p~NILl~~~~~~kl~DFGla~~ 257 (441)
+.|||+.|-.|.++-.. .+-... ..+++.---|-.. ||-|..|. |..++|..++.+.|+||.-|..
T Consensus 89 i~me~i~G~~L~~~~~~-----~~rk~l----~~vlE~a~~LD~~---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 89 IRMEYIDGRPLGKLEIG-----GDRKHL----LRVLEKAYKLDRL---GIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhcCcchhhhhhc-----ccHHHH----HHHHHHHHHHHHh---ccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 67999999888776542 022222 2344442223333 89999887 4444444444899999998874
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.18 E-value=2.7e-05 Score=85.09 Aligned_cols=155 Identities=19% Similarity=0.257 Sum_probs=91.4
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccC-chhhHHHHHHHHHhccCC-CCCe--eeEEeEEeccccCCee
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG-LQGHKEWVTEVNVLGVVE-HPNL--VKLIGYCAEDDERGIQ 177 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~-hpnI--v~l~~~~~~~~~~~~~ 177 (441)
++.|+.|.++.+|+......+. ...+++|+..... ......+.+|+.+|+.+. |++| .+++.+|.+....+ .
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~---~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G-~ 118 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGS---VKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIG-T 118 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCc---ceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCC-C
Confidence 5668999999999987644321 1236667654322 123356789999999985 6665 77777776543222 2
Q ss_pred EEEEEeccCCCChHH--------------------HH---hhcC---------CCCCCH--HHHHHHHH-----------
Q 013504 178 RLLIYEYMPNRSVQD--------------------HL---TSRF---------QATLPW--NTRLKIAQ----------- 212 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~--------------------~l---~~~~---------~~~l~~--~~~~~i~~----------- 212 (441)
.|+||||++|..+.+ .| +... +.+..+ .++..+..
T Consensus 119 ~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~ 198 (822)
T PLN02876 119 AFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKP 198 (822)
T ss_pred ceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCC
Confidence 489999998865321 11 1100 001011 11211111
Q ss_pred ----HHHHHHHHHhhCCC--------CCeEecccCCCcEEEcC-CCc-EEEeecCCCCCCCC
Q 013504 213 ----DAARGLAYLHEGMD--------FQIIFRDFKSSNILLDE-QWN-AKLSDFGLARLGPS 260 (441)
Q Consensus 213 ----qi~~~L~~LH~~~~--------~~iiHrDlKp~NILl~~-~~~-~kl~DFGla~~~~~ 260 (441)
.+...+.+|..+.. ..+||+|+++.|||++. ++. +-|.||+++.....
T Consensus 199 ~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdP 260 (822)
T PLN02876 199 PRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQ 260 (822)
T ss_pred CCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCCh
Confidence 12233556644321 35999999999999985 333 57999999886543
No 467
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.10 E-value=5.8e-05 Score=67.54 Aligned_cols=133 Identities=17% Similarity=0.263 Sum_probs=86.6
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccC----------------chhhHHHHHHHHHhccCC------CC
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRG----------------LQGHKEWVTEVNVLGVVE------HP 159 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~il~~l~------hp 159 (441)
...||+|+.-.||.-- .... ..||+..... ....++..+|+.-...+. +.
T Consensus 6 ~~~i~~G~~R~cy~HP--~dp~------~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~ 77 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP--DDPN------LCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWS 77 (199)
T ss_pred CcccccCCCceEEECC--CCCC------eEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccc
Confidence 4579999999999632 2221 6777776655 112345566666554444 88
Q ss_pred CeeeEEeEEeccccCCeeEEEEEeccCC------CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecc
Q 013504 160 NLVKLIGYCAEDDERGIQRLLIYEYMPN------RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRD 233 (441)
Q Consensus 160 nIv~l~~~~~~~~~~~~~~~lv~E~~~~------gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrD 233 (441)
+|.+++|+..++-.. -+|+|.+.+ -+|.+++.. ..++. .....+.+ -..||-.. +|+.+|
T Consensus 78 ~i~r~~G~veT~~G~----Glv~e~I~d~dG~~s~TL~~~l~~---~~~~~-~~~~~L~~---f~~~l~~~---~Iv~~d 143 (199)
T PF10707_consen 78 HIPRFYGFVETNLGL----GLVVELIRDADGNISPTLEDYLKE---GGLTE-ELRQALDE---FKRYLLDH---HIVIRD 143 (199)
T ss_pred ccccEeEEEecCCce----EEEEEEEECCCCCcCccHHHHHHc---CCccH-HHHHHHHH---HHHHHHHc---CCeecC
Confidence 999999999887655 567776522 478888854 34554 33333333 34566655 799999
Q ss_pred cCCCcEEEcCCC----cEEEee-cCCCC
Q 013504 234 FKSSNILLDEQW----NAKLSD-FGLAR 256 (441)
Q Consensus 234 lKp~NILl~~~~----~~kl~D-FGla~ 256 (441)
|+|.||++..+. .+.|+| ||-..
T Consensus 144 l~~~NIv~~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 144 LNPHNIVVQRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred CCcccEEEEecCCCceEEEEEeCCCCcc
Confidence 999999995332 578887 55433
No 468
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.07 E-value=6.5e-06 Score=88.55 Aligned_cols=197 Identities=23% Similarity=0.275 Sum_probs=138.3
Q ss_pred HHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 013504 148 TEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDF 227 (441)
Q Consensus 148 ~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 227 (441)
-|+..+.++.|+|++.+++|-.+....+....+..|+|..-++...+.. -...+....+.+..++.+||.|+|+.
T Consensus 231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~--v~~i~~~~~r~~~~~~~~GL~~~h~~--- 305 (1351)
T KOG1035|consen 231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS--VGSIPLETLRILHQKLLEGLAYLHSL--- 305 (1351)
T ss_pred HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh--ccccCHHHHHHHHHHHhhhHHHHHHh---
Confidence 4666777889999999999988776555333455789999999988876 46788899999999999999999986
Q ss_pred CeEecccCCC---cEEEcCCCcEEEe--ecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCcc--ccchhHHHHH
Q 013504 228 QIIFRDFKSS---NILLDEQWNAKLS--DFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYK--SDIWSFGVFL 300 (441)
Q Consensus 228 ~iiHrDlKp~---NILl~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~--~DvwSlG~il 300 (441)
...|.-+... +.-.+..+.+.++ ||+.++....... .-....+..+.++|......++.+ .|+|.+|.++
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~---~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK---SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCccc---chhhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence 4444444443 4444556667777 8888876554321 122344556778887776666554 7999999999
Q ss_pred HHHHhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHHHHH
Q 013504 301 YELITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEVVEV 379 (441)
Q Consensus 301 ~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 379 (441)
..+..|..+-..... ...+++. .......+...+|+..++++|+++.+++..
T Consensus 383 ~~~~~~~~i~~~~~~-------------------~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 383 LQLSQGEDISEKSAV-------------------PVSLLDV--------LSTSELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred hhhhhcCcccccccc-------------------hhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence 999988765321110 0000100 111146688899999999999999999875
No 469
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.95 E-value=9.4e-05 Score=68.42 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=26.5
Q ss_pred CCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 227 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
..++|+|+.|.|||++.+...-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3589999999999998776567999998764
No 470
>PRK10593 hypothetical protein; Provisional
Probab=97.92 E-value=0.00022 Score=68.34 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=53.3
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCC---CCeeeEEeEEeccccCCee
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEH---PNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h---pnIv~l~~~~~~~~~~~~~ 177 (441)
..+.||.|..+.||.....+.. +.+|..+. ......+..|...|+.+.- -.+.++++++......+ .
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~-------~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g-~ 87 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGN-------PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPG-P 87 (297)
T ss_pred eeeecCCccceeEEEEEcCCCC-------EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCC-C
Confidence 3456999999999987543321 56666432 1123467789999988842 36788888775432211 2
Q ss_pred EEEEEeccCCCCh
Q 013504 178 RLLIYEYMPNRSV 190 (441)
Q Consensus 178 ~~lv~E~~~~gsL 190 (441)
.+||||+++|+++
T Consensus 88 ~~LVmE~i~G~~~ 100 (297)
T PRK10593 88 DVLLLERLRGVSV 100 (297)
T ss_pred eEEEEeccCCEec
Confidence 4999999998765
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.83 E-value=0.00013 Score=68.34 Aligned_cols=137 Identities=15% Similarity=0.077 Sum_probs=74.7
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCe-eeEEeEEeccccCCeeEEEEEe
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNL-VKLIGYCAEDDERGIQRLLIYE 183 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnI-v~l~~~~~~~~~~~~~~~lv~E 183 (441)
+..|-.+.+|+....+ . .+.+|..........-...+|..+++.+..-++ .+++... .+ ++|||
T Consensus 4 ~~~G~tn~~y~~~~~~--~-----~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~~------~~v~e 68 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPG--I-----SFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--EH------WLLVE 68 (256)
T ss_pred CCCcCcCCeEEEEeCC--c-----cEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--CC------EEEEE
Confidence 5567788999876322 1 277776544322110124578888888854333 3333332 11 68999
Q ss_pred ccCCCChHHH-----------------HhhcC--CCCCCHH-HHHHHHHHH---------HHHHHHHhhC-----CCCCe
Q 013504 184 YMPNRSVQDH-----------------LTSRF--QATLPWN-TRLKIAQDA---------ARGLAYLHEG-----MDFQI 229 (441)
Q Consensus 184 ~~~~gsL~~~-----------------l~~~~--~~~l~~~-~~~~i~~qi---------~~~L~~LH~~-----~~~~i 229 (441)
|++|..+... |+... ..+++.. ....+..++ ...+..+-.. ....+
T Consensus 69 ~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 148 (256)
T TIGR02721 69 WLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAP 148 (256)
T ss_pred eccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCee
Confidence 9998765421 11110 1112211 111211111 1111212111 12358
Q ss_pred EecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 230 IFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 230 iHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
+|+|+.|.||++++++ +.|+||..+..
T Consensus 149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 149 LHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred ecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 9999999999999877 78999998764
No 472
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.78 E-value=0.00032 Score=64.68 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=27.1
Q ss_pred CCeEecccCCCcEEEcC-CCcEEEeecCCCCC
Q 013504 227 FQIIFRDFKSSNILLDE-QWNAKLSDFGLARL 257 (441)
Q Consensus 227 ~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~ 257 (441)
..++|+|+.+.|||++. ++.+.|+||..|..
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 46999999999999998 57899999987764
No 473
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.76 E-value=0.00022 Score=68.30 Aligned_cols=146 Identities=18% Similarity=0.148 Sum_probs=80.9
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCC--eeeEEeEEeccc--cCCee
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPN--LVKLIGYCAEDD--ERGIQ 177 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~--~~~~~ 177 (441)
++.|..|....+|+....+. .+++|+... .....+..|+.++..+.+-+ +.+++....... .....
T Consensus 19 i~~i~~G~~n~~y~v~~~~~-------~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~ 88 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSG-------RYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGK 88 (296)
T ss_pred eecccCccccceEEEEeCCC-------cEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCc
Confidence 45677788789998764332 278888754 22345667888887774322 444433110000 00113
Q ss_pred EEEEEeccCCCChHH----H----------Hhhc---CCC------CCCHHHHH----------HHHHHHHHHHHHHhh-
Q 013504 178 RLLIYEYMPNRSVQD----H----------LTSR---FQA------TLPWNTRL----------KIAQDAARGLAYLHE- 223 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~----~----------l~~~---~~~------~l~~~~~~----------~i~~qi~~~L~~LH~- 223 (441)
.++|++|++|..+.. . ++.. ... ...|.... .....+...+.++..
T Consensus 89 ~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 168 (296)
T cd05153 89 PAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAF 168 (296)
T ss_pred eEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhh
Confidence 488999999876532 0 1100 000 01111110 011112333444442
Q ss_pred ---CCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 224 ---GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 224 ---~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
....+++|+|+.|.|||+++++.+.|+||+.+..
T Consensus 169 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 169 DPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 1234799999999999999987778999997764
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.63 E-value=0.0016 Score=64.71 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=50.0
Q ss_pred ceeecccceeEEEEEEcCCCCcccceeEEEEEcccc------C-chhhHHHHHHHHHhccCC---CCCeeeEEeEEeccc
Q 013504 103 LMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR------G-LQGHKEWVTEVNVLGVVE---HPNLVKLIGYCAEDD 172 (441)
Q Consensus 103 ~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~-~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~ 172 (441)
+.||.|.++.||++....+.. .+.||.-... . .-...+...|.+.|..+. -.++.+++.+-. +
T Consensus 32 ~elggGn~N~VyrV~~~~g~~-----svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~ 104 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGK-----SVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--E 104 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCe-----EEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--C
Confidence 468999999999998754321 3888874321 1 113456677888888762 245777776633 2
Q ss_pred cCCeeEEEEEeccCCCC
Q 013504 173 ERGIQRLLIYEYMPNRS 189 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~gs 189 (441)
. .++||||+++..
T Consensus 105 ~----~~lVME~L~~~~ 117 (401)
T PRK09550 105 L----AVTVMEDLSDHK 117 (401)
T ss_pred C----CEEEEecCCCcc
Confidence 2 289999998744
No 475
>PRK05231 homoserine kinase; Provisional
Probab=97.58 E-value=0.0023 Score=61.97 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=27.0
Q ss_pred CCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 226 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
..++||+|+.|.|||++.+...-|+||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 34899999999999999765568999998764
No 476
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.57 E-value=9.8e-06 Score=89.13 Aligned_cols=177 Identities=11% Similarity=0.038 Sum_probs=123.3
Q ss_pred EEEEEccccCchhhHH-----HHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCC--CCC
Q 013504 130 IAVKQLSRRGLQGHKE-----WVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQ--ATL 202 (441)
Q Consensus 130 vavK~~~~~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--~~l 202 (441)
+.+++.+....+...+ ...|..-++...|+++...+.-....... ..+.+++|+.+|.+.+.|.+... ..+
T Consensus 1255 Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~--ee~~r~~~~~~g~~f~iIikg~ee~~~l 1332 (2724)
T KOG1826|consen 1255 FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSEST--EEYIRSLYVEFGKLFSIIIKGLEESPDL 1332 (2724)
T ss_pred eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCCh--HHHHHHHHHHHhHHHHHHHhccccCCcc
Confidence 4566665544443333 33455555667899988776554433322 44889999999999999864321 223
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCC--CeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCcc
Q 013504 203 PWNTRLKIAQDAARGLAYLHEGMDF--QIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPE 280 (441)
Q Consensus 203 ~~~~~~~i~~qi~~~L~~LH~~~~~--~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE 280 (441)
+..-+.....+.+.+..-+|+..+. -.+|+++|+-|.+|..+..+|++++|+.+..... ........+++.|+.|+
T Consensus 1333 d~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~--~sf~Gl~l~sp~~v~ql 1410 (2724)
T KOG1826|consen 1333 DRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV--LSFFGLELCSPIYVLQL 1410 (2724)
T ss_pred hhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCch--HhhhhhhhCCHHHHHHH
Confidence 3222333333336666666654322 3689999999999999999999999999943322 22345678899999999
Q ss_pred ccccCCCCccccchhHHHHHHHHHhCCCCC
Q 013504 281 YIQTGRLTYKSDIWSFGVFLYELITGRRPL 310 (441)
Q Consensus 281 ~~~~~~~~~~~DvwSlG~il~elltG~~P~ 310 (441)
+...-.++.++|+|..|+.+|+..-|..+|
T Consensus 1411 i~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1411 IKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 988888999999999999999998888776
No 477
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.39 E-value=0.0032 Score=60.71 Aligned_cols=147 Identities=15% Similarity=0.122 Sum_probs=78.3
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCC--eeeEEeEEecc--ccCCee
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPN--LVKLIGYCAED--DERGIQ 177 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~--~~~~~~ 177 (441)
++.++.|....+|+....+. .+.+|+..... ....+..|+.++..|...+ +.+++...... ......
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-------~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~ 97 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-------RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGK 97 (307)
T ss_pred ccccCCccccceEEEEeCCC-------cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCe
Confidence 45677777789998764322 26778764421 1234556777777663222 34443321100 000113
Q ss_pred EEEEEeccCCCChHH-----------H---HhhcC-C--CC-------CCHHHHH------------HHHHHHHHHHHHH
Q 013504 178 RLLIYEYMPNRSVQD-----------H---LTSRF-Q--AT-------LPWNTRL------------KIAQDAARGLAYL 221 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~-----------~---l~~~~-~--~~-------l~~~~~~------------~i~~qi~~~L~~L 221 (441)
.++||+|++|..+.. . ++... + .. -.|.... .....+...+.++
T Consensus 98 ~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l 177 (307)
T TIGR00938 98 PACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYL 177 (307)
T ss_pred EEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHH
Confidence 589999998854321 1 11100 0 00 0111100 0011223345555
Q ss_pred hh----CCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 222 HE----GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 222 H~----~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.. ....+++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 178 ~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 178 DKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 32 2245899999999999999887778999997753
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.35 E-value=0.0017 Score=62.38 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=27.8
Q ss_pred CCCeEecccCCCcEEEcCC----CcEEEeecCCCCC
Q 013504 226 DFQIIFRDFKSSNILLDEQ----WNAKLSDFGLARL 257 (441)
Q Consensus 226 ~~~iiHrDlKp~NILl~~~----~~~kl~DFGla~~ 257 (441)
...++|+|+.|.|||++++ +.+.|+||..|..
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 4578999999999999985 7899999998764
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.21 E-value=0.00036 Score=65.92 Aligned_cols=145 Identities=15% Similarity=0.123 Sum_probs=90.6
Q ss_pred cchHHHHHHhc---CCcccceeecccceeEEEEEEcCCCCcccceeEEEEEccc--cCc---------------hhh---
Q 013504 87 FTFSELKTATK---NFSRSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSR--RGL---------------QGH--- 143 (441)
Q Consensus 87 ~~~~~~~~~~~---~f~~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~---------------~~~--- 143 (441)
+.+-.+++..+ =+++++.||-|.-+.||.+.+..... .++|.-+. ... ..+
T Consensus 79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~------~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyL 152 (465)
T KOG2268|consen 79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNP------LILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYL 152 (465)
T ss_pred chHHHHHHHHhcchhhhhccccccccccceEEEecCCCCc------hhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhh
Confidence 33444444443 36788899999999999998764432 45544221 000 001
Q ss_pred --HHHHHHHHHhccCC-CC-CeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 013504 144 --KEWVTEVNVLGVVE-HP-NLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLA 219 (441)
Q Consensus 144 --~~~~~E~~il~~l~-hp-nIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 219 (441)
-...+|+..|+.|. |- -|.+.+++. ..++|||++.|-.|...-+- .+.. .+...+..-+.
T Consensus 153 SRlaa~kEfafmkaL~e~gfpVPkpiD~~--------RH~Vvmelv~g~Pl~~v~~v-----~d~~---~ly~~lm~~Iv 216 (465)
T KOG2268|consen 153 SRLAATKEFAFMKALYERGFPVPKPIDHN--------RHCVVMELVDGYPLRQVRHV-----EDPP---TLYDDLMGLIV 216 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccccc--------ceeeHHHhhcccceeeeeec-----CChH---HHHHHHHHHHH
Confidence 12357888888873 32 233443332 23889999999887654322 1222 23333333444
Q ss_pred HHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 220 YLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 220 ~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
-|-.. |+||+|..-=||++++++.++++||-...
T Consensus 217 ~la~~---GlIHgDFNEFNimv~dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 217 RLANH---GLIHGDFNEFNIMVKDDDKIVVIDFPQMV 250 (465)
T ss_pred HHHHc---CceecccchheeEEecCCCEEEeechHhh
Confidence 55555 99999999999999999999999997554
No 480
>PLN02236 choline kinase
Probab=97.05 E-value=0.0086 Score=58.70 Aligned_cols=144 Identities=14% Similarity=0.172 Sum_probs=78.4
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCee-eEEeEEeccccCCeeEEEEE
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLV-KLIGYCAEDDERGIQRLLIY 182 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~~~~lv~ 182 (441)
.|-.|-...+|+........ .....+.+|........... -.+|..++..+..-++. ++++++.. ..|+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~-~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~--------g~v~ 112 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEG-NLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN--------GRVE 112 (344)
T ss_pred EcCCcccceeEEEEeCCCCC-CCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECC--------ceEE
Confidence 45457788999987543211 11234778877654322222 25788888888543333 44555421 2478
Q ss_pred eccCCCChHHH-----------------HhhcC--CC--CCCHHHHHHHHHHH-----------------HHHHHHH---
Q 013504 183 EYMPNRSVQDH-----------------LTSRF--QA--TLPWNTRLKIAQDA-----------------ARGLAYL--- 221 (441)
Q Consensus 183 E~~~~gsL~~~-----------------l~~~~--~~--~l~~~~~~~i~~qi-----------------~~~L~~L--- 221 (441)
+|+++.+|... ++... .. ...+..+..+..++ ...+..|
T Consensus 113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~ 192 (344)
T PLN02236 113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE 192 (344)
T ss_pred EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence 99988776421 11100 00 11123332332211 1111112
Q ss_pred -hh-CCCCCeEecccCCCcEEEcC-CCcEEEeecCCCCC
Q 013504 222 -HE-GMDFQIIFRDFKSSNILLDE-QWNAKLSDFGLARL 257 (441)
Q Consensus 222 -H~-~~~~~iiHrDlKp~NILl~~-~~~~kl~DFGla~~ 257 (441)
.. .....++|+|+++.|||+++ ++.+.|+||..+..
T Consensus 193 ~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 193 LSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred hcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 21 11336899999999999986 46799999987764
No 481
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.96 E-value=0.0014 Score=65.48 Aligned_cols=165 Identities=21% Similarity=0.267 Sum_probs=92.2
Q ss_pred HHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 013504 144 KEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHE 223 (441)
Q Consensus 144 ~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 223 (441)
.+++-...+++.+.|+|...++++....... ..+|||++ +.+|++.+..+. +-. .... -|
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r---~IVV~e~~-~~Sled~~~~~~---l~~------~s~~------~~- 86 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHER---VIVVMEHY-TMSLEDILKTGN---LKD------ESLL------AH- 86 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccce---EEEEehhh-ccchHHHHHhcc---cch------hhhc------cc-
Confidence 4555667888899999999999887655443 57899999 779999987642 111 1101 11
Q ss_pred CCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCCccccchhHHHHHHHH
Q 013504 224 GMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLTYKSDIWSFGVFLYEL 303 (441)
Q Consensus 224 ~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~el 303 (441)
++.|-.+ ++++| -++... |- ...+++|||++|.++.|+
T Consensus 87 ----~~~~~~~------------~~~td-~~~t~~--------------------~~-----~~~pKsdVwsl~~i~~el 124 (725)
T KOG1093|consen 87 ----GVLHLNI------------IYITD-HFLTKY--------------------PS-----PIGPKSDVWSLGFIILEL 124 (725)
T ss_pred ----ccceehh------------hhccc-cccccC--------------------CC-----CCCcchhhhhHHHHHHHH
Confidence 3333221 23333 111000 00 111499999999999999
Q ss_pred HhCCCCCCCCCchhHHHHHHhhhhhcccccchhhhcCCCCCCcchHHHHHHHHHHHHHhhcccCCCCCCHHHH
Q 013504 304 ITGRRPLDRNRPKSEQKLLEWVRPHLTDAKKFTMILDPKLEGKYSIKLAQKLAAVANKCLARQAKGRPKMSEV 376 (441)
Q Consensus 304 ltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 376 (441)
.-|..-+..... .+....+............... .......+...+.++...|+-..|..||...+.
T Consensus 125 ~L~~~l~~~~~~---s~~l~~i~k~~~~d~~~~~~a~---e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 125 YLGISLEAELTE---SEYLEILLKYYTDDQELLSTAM---EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHhhHHHHHHHH---HHHHHHHHHhccCchhHHHHHH---HHHHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 998766532221 1111222121111111110000 012333566778889999999999888754443
No 482
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.92 E-value=0.0054 Score=55.06 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=82.2
Q ss_pred EEEEEccccCch-hhHHHHHHHHHhccCCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChHHHHhhcCCCCCCHHHHH
Q 013504 130 IAVKQLSRRGLQ-GHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQDHLTSRFQATLPWNTRL 208 (441)
Q Consensus 130 vavK~~~~~~~~-~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~ 208 (441)
..+|++...... ...-+..+.+++.+++ .|+++. .+ .+...-++.|+|-... ....-
T Consensus 88 L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~----ND--n~~~yGvIlE~Cy~~~--------------i~~~N 145 (308)
T PF07387_consen 88 LFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLK----ND--NNYKYGVILERCYKIK--------------INFSN 145 (308)
T ss_pred hhhhhccCCCcccchhhhhhhhhHHHHhh--heeEee----cC--CCceeEEEEeeccCcc--------------cchhH
Confidence 556666554433 3345677888888875 477775 22 2234467889883211 11112
Q ss_pred HHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCCCCCcceeeceecccCcCCccccccCCCC
Q 013504 209 KIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGRLT 288 (441)
Q Consensus 209 ~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 288 (441)
.|..+ +..|.-.|+. +.+.+|+|-.|+||+-|..|.+||.|-+..-.- +..|.-- .....+
T Consensus 146 ~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~~--------------~V~~vN~---~Y~~lT 206 (308)
T PF07387_consen 146 FITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLEN--------------QVNMVNI---EYESLT 206 (308)
T ss_pred HHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhhh--------------eeeEEee---eccccC
Confidence 22222 4678888965 458999999999999999999999998754310 1112111 123456
Q ss_pred ccccchhHHHHHHHHHh
Q 013504 289 YKSDIWSFGVFLYELIT 305 (441)
Q Consensus 289 ~~~DvwSlG~il~ellt 305 (441)
.++.+-+|=.-++++..
T Consensus 207 ~~aE~~~fv~s~l~~v~ 223 (308)
T PF07387_consen 207 QEAEVKVFVKSCLKLVE 223 (308)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 66666666666666655
No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.79 E-value=0.025 Score=56.18 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=47.6
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCc-------hhhHHHHHHHHHhccCC---CCCeeeEEeEEecc
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGL-------QGHKEWVTEVNVLGVVE---HPNLVKLIGYCAED 171 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~ 171 (441)
.+.||-|....||+..... + .+.||+-..... -...+-..|...|..+. ..++.+++.++.+.
T Consensus 37 ~~eiggGn~N~VyrV~~~~-~------svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~ 109 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSS-G------SFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTM 109 (418)
T ss_pred EEEcCCCceeeEEEEEcCC-c------cEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCC
Confidence 4568999999999977532 1 277877542111 12334455677776653 24788888887743
Q ss_pred ccCCeeEEEEEeccCC
Q 013504 172 DERGIQRLLIYEYMPN 187 (441)
Q Consensus 172 ~~~~~~~~lv~E~~~~ 187 (441)
. +++|||+++
T Consensus 110 ~------vlvME~L~~ 119 (418)
T PLN02756 110 A------LIGMRYLEP 119 (418)
T ss_pred C------EEEEeecCC
Confidence 3 889999977
No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.75 E-value=0.02 Score=54.97 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=30.7
Q ss_pred CCCeEecccCCCcEEEcCCCcEEEeecCCCCCCCC
Q 013504 226 DFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPS 260 (441)
Q Consensus 226 ~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 260 (441)
...++|+|+.+.||+++.+.-+=+.||+++.....
T Consensus 197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred CceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 34699999999999999988899999999987554
No 485
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.74 E-value=0.012 Score=56.93 Aligned_cols=139 Identities=15% Similarity=0.172 Sum_probs=90.1
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEccccCch---------------------hhHH-----HHHHHHHhcc
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQ---------------------GHKE-----WVTEVNVLGV 155 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------~~~~-----~~~E~~il~~ 155 (441)
-..|..|.-+.||.+...++. .+|||+++..-.. ..+. ...|++-|.+
T Consensus 149 nGCiSTGKEANVYHat~~dG~------~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkR 222 (520)
T KOG2270|consen 149 NGCISTGKEANVYHATEEDGS------EFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKR 222 (520)
T ss_pred ccccccCccceeEeeecCCCc------eEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHH
Confidence 346777888889998765543 3899987632110 0011 2357777888
Q ss_pred CCCCCeeeEEeEEeccccCCeeEEEEEeccCCCChH-HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccc
Q 013504 156 VEHPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQ-DHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDF 234 (441)
Q Consensus 156 l~hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~-~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDl 234 (441)
|+.-.|.-.--+.. .. .+|||+|+...... -.|. ...++...+..+-.|++.-+.-|-+.| ++||.||
T Consensus 223 l~~aGIP~PePIlL-k~-----hVLVM~FlGrdgw~aPkLK---d~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADL 291 (520)
T KOG2270|consen 223 LNNAGIPCPEPILL-KN-----HVLVMEFLGRDGWAAPKLK---DASLSTSKARELYQQCVRIMRRLYQKC--RLVHADL 291 (520)
T ss_pred HHhcCCCCCCceee-ec-----ceEeeeeccCCCCcCcccc---cccCChHHHHHHHHHHHHHHHHHHHHh--ceeccch
Confidence 76544332111111 11 27999999532211 1122 245667778888888988888888765 8999999
Q ss_pred CCCcEEEcCCCcEEEeecCCCCCC
Q 013504 235 KSSNILLDEQWNAKLSDFGLARLG 258 (441)
Q Consensus 235 Kp~NILl~~~~~~kl~DFGla~~~ 258 (441)
.--|+|+.++ .+.|+|-+.+...
T Consensus 292 SEfN~LyhdG-~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 292 SEFNLLYHDG-KLYIIDVSQSVEH 314 (520)
T ss_pred hhhhheEECC-EEEEEEccccccC
Confidence 9999998754 7999999887643
No 486
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.66 E-value=0.029 Score=54.73 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=43.9
Q ss_pred eeecccceeEEEEEEcCCCCcccceeEEEEEcccc------C-chhhHHHHHHHHHhccCC--CC-CeeeEEeEEecccc
Q 013504 104 MIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR------G-LQGHKEWVTEVNVLGVVE--HP-NLVKLIGYCAEDDE 173 (441)
Q Consensus 104 ~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~-~~~~~~~~~E~~il~~l~--hp-nIv~l~~~~~~~~~ 173 (441)
.||-|....||++....+. ..|.||.-... . .-...+...|...|+... -| .+.+++.|-. +.
T Consensus 2 EigdGnlN~VfrV~~~~g~-----~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~--e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGD-----RAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDT--EM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCC-----eeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEcc--cc
Confidence 4799999999999864321 23788774321 1 112345567888887653 34 4555544432 22
Q ss_pred CCeeEEEEEeccCC
Q 013504 174 RGIQRLLIYEYMPN 187 (441)
Q Consensus 174 ~~~~~~lv~E~~~~ 187 (441)
..+|||+++.
T Consensus 75 ----~~~vMEdL~~ 84 (370)
T TIGR01767 75 ----AVTVMEDLSH 84 (370)
T ss_pred ----ceehHhhCcc
Confidence 2789999955
No 487
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.65 E-value=0.02 Score=54.29 Aligned_cols=31 Identities=29% Similarity=0.527 Sum_probs=26.1
Q ss_pred CeEecccCCCcEEEcCCCc-EEEeecCCCCCC
Q 013504 228 QIIFRDFKSSNILLDEQWN-AKLSDFGLARLG 258 (441)
Q Consensus 228 ~iiHrDlKp~NILl~~~~~-~kl~DFGla~~~ 258 (441)
.++|+|+.|.|||+++++. .-|+||+.+...
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 5899999999999997555 569999988754
No 488
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.58 E-value=0.01 Score=57.19 Aligned_cols=71 Identities=24% Similarity=0.290 Sum_probs=55.0
Q ss_pred EEEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 178 RLLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEGMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 178 ~~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.|++|++- |+++.- + +.-.+.++..++.+.+..+.-+..+ ...=|||+.-.||||+ +|+|-|+||-++|.
T Consensus 301 ~yl~~kdh-gt~is~-i-----k~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 301 LYLHFKDH-GTPISI-I-----KADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred EEEEEecC-Cceeee-e-----ecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEeeeeec
Confidence 46666664 444431 1 2346788999999988877777764 5889999999999999 99999999999995
Q ss_pred C
Q 013504 258 G 258 (441)
Q Consensus 258 ~ 258 (441)
.
T Consensus 371 ~ 371 (488)
T COG5072 371 S 371 (488)
T ss_pred c
Confidence 3
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.35 E-value=0.059 Score=51.85 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=26.2
Q ss_pred CCeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 227 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
.+++|+|+.+.||+++. +.+.|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 48999999999999988 6789999997654
No 490
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.29 E-value=0.035 Score=52.79 Aligned_cols=74 Identities=20% Similarity=0.264 Sum_probs=42.6
Q ss_pred ccceeecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccC---CCCCeeeEEeEEeccccCCee
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVV---EHPNLVKLIGYCAEDDERGIQ 177 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~~~~~ 177 (441)
..+.|+.|....+|+.. ..+. .+.||.-.. .....|..|..-|+.| .--.+.+++++....+..
T Consensus 21 ~~~~v~GG~i~~a~~~~--~~~~-----~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~--- 87 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD--TDGG-----SYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA--- 87 (288)
T ss_dssp EEEEE--SSSSEEEEEE--TTS------EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC---
T ss_pred eeEecCCCChhheEEEE--CCCc-----cEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc---
Confidence 34568889999999876 2222 388888652 2234566788777776 334577788877665544
Q ss_pred EEEEEeccCCC
Q 013504 178 RLLIYEYMPNR 188 (441)
Q Consensus 178 ~~lv~E~~~~g 188 (441)
||||||++.+
T Consensus 88 -fLlle~l~~~ 97 (288)
T PF03881_consen 88 -FLLLEFLEMG 97 (288)
T ss_dssp -EEEEE-----
T ss_pred -eEEEEeecCC
Confidence 9999999776
No 491
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.94 E-value=0.085 Score=51.41 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=25.6
Q ss_pred CeEecccCCCcEEEcC-CCcEEEeecCCCCC
Q 013504 228 QIIFRDFKSSNILLDE-QWNAKLSDFGLARL 257 (441)
Q Consensus 228 ~iiHrDlKp~NILl~~-~~~~kl~DFGla~~ 257 (441)
-++|+|+.+.|||+++ ++.++++||..|..
T Consensus 183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 4789999999999975 56899999997753
No 492
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.68 E-value=0.14 Score=49.64 Aligned_cols=143 Identities=22% Similarity=0.297 Sum_probs=77.7
Q ss_pred eecccceeEEEEEEcCCCCcccceeEEEEEccccCchhhHHHHHHHHHhccCC-C--CC---eeeEEeEEeccccCCeeE
Q 013504 105 IGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVE-H--PN---LVKLIGYCAEDDERGIQR 178 (441)
Q Consensus 105 LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h--pn---Iv~l~~~~~~~~~~~~~~ 178 (441)
|.+ .-..||+....+.. +.+|+.... ....++..|...|..|. + += |..+-|-....-..+...
T Consensus 34 l~s-~eN~~f~~~~~~g~-------~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~ 103 (331)
T COG2334 34 LNS-EENSNFRVQTEDGR-------YILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRP 103 (331)
T ss_pred ccc-ccCceEEEEecCCC-------eEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCcee
Confidence 444 45568887765543 677777654 23455566777777663 1 11 222212111110111245
Q ss_pred EEEEeccCCCChHH-H--------------Hhh--c-C-------CCCCCHHH-------------HHHHHHHHHHHHHH
Q 013504 179 LLIYEYMPNRSVQD-H--------------LTS--R-F-------QATLPWNT-------------RLKIAQDAARGLAY 220 (441)
Q Consensus 179 ~lv~E~~~~gsL~~-~--------------l~~--~-~-------~~~l~~~~-------------~~~i~~qi~~~L~~ 220 (441)
+-|++|++|..+.. . |+. + . .....|.. ......++...+..
T Consensus 104 a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~ 183 (331)
T COG2334 104 AALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDR 183 (331)
T ss_pred EEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHH
Confidence 77899999987772 1 110 0 0 00122220 01123334444444
Q ss_pred HhhCC----CC-C--eEecccCCCcEEEcCCCc-EEEeecCCCCC
Q 013504 221 LHEGM----DF-Q--IIFRDFKSSNILLDEQWN-AKLSDFGLARL 257 (441)
Q Consensus 221 LH~~~----~~-~--iiHrDlKp~NILl~~~~~-~kl~DFGla~~ 257 (441)
+.... .. + +||+|+.|.||+++.+.. +.++|||-+..
T Consensus 184 ~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 184 LLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred HHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 44321 22 3 999999999999999885 89999997763
No 493
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.57 E-value=0.11 Score=51.50 Aligned_cols=75 Identities=20% Similarity=0.189 Sum_probs=45.9
Q ss_pred cceeecccceeEEEEEEcCCCCcccceeEEEEEcccc-----C-chhhHHHHHHHHHhccCC--CC-CeeeEEeEEeccc
Q 013504 102 SLMIGEGGFGGVYRGVIRSTEDSHKKIDIAVKQLSRR-----G-LQGHKEWVTEVNVLGVVE--HP-NLVKLIGYCAEDD 172 (441)
Q Consensus 102 ~~~LG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~-~~~~~~~~~E~~il~~l~--hp-nIv~l~~~~~~~~ 172 (441)
.+.||-|.-.-||++....... .|.||+-... . .-...+...|..+|+... -| ++.+++.+-. +
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~-----svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~--e 106 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNI-----SVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDS--V 106 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCc-----eEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECc--H
Confidence 4568999999999998742122 2777774321 1 112356667888888763 34 4555654432 2
Q ss_pred cCCeeEEEEEeccCC
Q 013504 173 ERGIQRLLIYEYMPN 187 (441)
Q Consensus 173 ~~~~~~~lv~E~~~~ 187 (441)
. ..+|||+++.
T Consensus 107 ~----~~~vMEdL~~ 117 (409)
T PRK12396 107 M----NCCVMEDLSD 117 (409)
T ss_pred H----hhHHHHhCcc
Confidence 2 2789999865
No 494
>PTZ00384 choline kinase; Provisional
Probab=95.37 E-value=0.19 Score=49.98 Aligned_cols=29 Identities=28% Similarity=0.237 Sum_probs=24.0
Q ss_pred CCeEecccCCCcEEEcCCCcEEEeecCCCC
Q 013504 227 FQIIFRDFKSSNILLDEQWNAKLSDFGLAR 256 (441)
Q Consensus 227 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 256 (441)
...+|.|+-+.|||.+++ .+.++||-.|.
T Consensus 227 ~VfCHNDL~~gNIL~~~~-~l~lID~EYA~ 255 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFNQ-GIYFIDFDFAG 255 (383)
T ss_pred eeeeeccCCcccEEecCC-CEEEEEecccc
Confidence 367899999999997654 69999997664
No 495
>PRK06148 hypothetical protein; Provisional
Probab=95.17 E-value=0.22 Score=55.97 Aligned_cols=32 Identities=38% Similarity=0.391 Sum_probs=26.7
Q ss_pred CCCeEecccCCCcEEEcCCC--cEE-EeecCCCCC
Q 013504 226 DFQIIFRDFKSSNILLDEQW--NAK-LSDFGLARL 257 (441)
Q Consensus 226 ~~~iiHrDlKp~NILl~~~~--~~k-l~DFGla~~ 257 (441)
..++||+|+.+.|||++.++ .+. |+|||-+..
T Consensus 202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 44799999999999998875 554 999998764
No 496
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.10 E-value=0.09 Score=51.66 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=42.2
Q ss_pred EEEEeccCCCChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEecccCCCcEEEcCC
Q 013504 179 LLIYEYMPNRSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLH-EGMDFQIIFRDFKSSNILLDEQ 244 (441)
Q Consensus 179 ~lv~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~~iiHrDlKp~NILl~~~ 244 (441)
.|+=+|..|-++..++... ..++....+++.--+.||--+- -. +++|.|+.|.||++..+
T Consensus 321 vl~E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vD---NFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVD---NFVHADLHPGNVLIRFN 381 (565)
T ss_pred eeeeeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhh---cceecccCCCcEEEEec
Confidence 6677889999999999763 4455555666655555554322 22 79999999999999543
No 497
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.26 E-value=0.33 Score=44.19 Aligned_cols=56 Identities=23% Similarity=0.335 Sum_probs=35.9
Q ss_pred eEEEEEccccCchhhHHHHHHHHHhccCC---CCCeeeEEeEEeccccCCeeEEEEEeccCCCChH
Q 013504 129 DIAVKQLSRRGLQGHKEWVTEVNVLGVVE---HPNLVKLIGYCAEDDERGIQRLLIYEYMPNRSVQ 191 (441)
Q Consensus 129 ~vavK~~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~~~~~~~lv~E~~~~gsL~ 191 (441)
++.||.-... ....|..|+.-|..|. --++.+++.+-...+. .|+||||++-|.+.
T Consensus 41 ~~FvK~n~~~---~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~----sylVle~L~~~~~d 99 (286)
T COG3001 41 PFFVKCNQRE---QLSMFTAEADGLELLARSNTITVPKVIAVGASRDH----SYLVLEYLPTGPLD 99 (286)
T ss_pred ceEEEecchh---hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCe----eEEEEeeccCCCCC
Confidence 3777765432 2345667877776663 3456666665555443 49999999887665
No 498
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=94.00 E-value=0.091 Score=50.41 Aligned_cols=80 Identities=16% Similarity=0.139 Sum_probs=44.4
Q ss_pred EEEEeccCC--CChHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-CCCCeEecccCCCcEEEcCC-----------
Q 013504 179 LLIYEYMPN--RSVQDHLTSRFQATLPWNTRLKIAQDAARGLAYLHEG-MDFQIIFRDFKSSNILLDEQ----------- 244 (441)
Q Consensus 179 ~lv~E~~~~--gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~~~iiHrDlKp~NILl~~~----------- 244 (441)
.+|++++-. ..+..-.....+-..-.+-+..++.||+.-.--+-.. +-.+.+|-||||+|||+-+.
T Consensus 247 IIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~ 326 (434)
T PF05445_consen 247 IIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNR 326 (434)
T ss_pred EEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCe
Confidence 577776422 2222222222233333455667777875433113222 12379999999999999332
Q ss_pred -------CcEEEeecCCCCCC
Q 013504 245 -------WNAKLSDFGLARLG 258 (441)
Q Consensus 245 -------~~~kl~DFGla~~~ 258 (441)
-.++|.||.+++..
T Consensus 327 ~~vF~Epi~~~LnDFDfSqv~ 347 (434)
T PF05445_consen 327 NYVFKEPIRCCLNDFDFSQVA 347 (434)
T ss_pred EEEecccceeeecccCHHHhc
Confidence 23677888887753
No 499
>PTZ00296 choline kinase; Provisional
Probab=93.78 E-value=0.79 Score=46.46 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=45.3
Q ss_pred ccceeecccceeEEEEEEcCCCCc---ccceeEEEEEccccCchhhHHHHHHHHHhccCCCCCee-eEEeEEeccccCCe
Q 013504 101 RSLMIGEGGFGGVYRGVIRSTEDS---HKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLV-KLIGYCAEDDERGI 176 (441)
Q Consensus 101 ~~~~LG~G~~g~Vy~~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~~~~ 176 (441)
.++.|..|-...+|++........ .....|.+++......... .-.+|..++..+..-+|. ++++.+. +
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lI-dR~~E~~v~~~ls~~gi~P~l~~~f~--g---- 181 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELY-NPISEFEVYKTMSKYRIAPQLLNTFS--G---- 181 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCcccee-CHHHHHHHHHHHHHCCCCCceEEEeC--C----
Confidence 345566677788998875432111 1123477777654322211 224678887777544444 3444442 1
Q ss_pred eEEEEEeccCCCCh
Q 013504 177 QRLLIYEYMPNRSV 190 (441)
Q Consensus 177 ~~~lv~E~~~~gsL 190 (441)
..|.||++|.+|
T Consensus 182 --g~I~efi~g~~l 193 (442)
T PTZ00296 182 --GRIEEWLYGDPL 193 (442)
T ss_pred --CEEEEeeCCccC
Confidence 568999998754
No 500
>PRK10271 thiK thiamine kinase; Provisional
Probab=93.42 E-value=0.071 Score=47.10 Aligned_cols=29 Identities=17% Similarity=0.196 Sum_probs=25.9
Q ss_pred CeEecccCCCcEEEcCCCcEEEeecCCCCC
Q 013504 228 QIIFRDFKSSNILLDEQWNAKLSDFGLARL 257 (441)
Q Consensus 228 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 257 (441)
-.+|+|+.|.||++++++ ++|+||+.+..
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 568999999999998887 89999998864
Done!