Query 013505
Match_columns 441
No_of_seqs 235 out of 1594
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 11:50:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 6E-100 2E-104 780.4 49.9 418 18-440 4-431 (490)
2 2j6l_A Aldehyde dehydrogenase 100.0 3E-97 1E-101 765.0 52.6 436 4-440 8-444 (500)
3 3ifg_A Succinate-semialdehyde 100.0 3.9E-97 1E-101 760.5 52.1 417 20-440 12-432 (484)
4 3ek1_A Aldehyde dehydrogenase; 100.0 2.1E-96 7E-101 757.4 51.8 414 21-440 33-450 (504)
5 4f3x_A Putative aldehyde dehyd 100.0 6.3E-97 2E-101 760.9 47.7 428 8-440 13-445 (498)
6 3ed6_A Betaine aldehyde dehydr 100.0 2.8E-96 1E-100 759.1 50.4 417 20-440 32-458 (520)
7 3rh9_A Succinate-semialdehyde 100.0 4.2E-96 1E-100 755.5 50.2 417 19-440 10-432 (506)
8 4e4g_A Methylmalonate-semialde 100.0 1.4E-96 5E-101 761.4 46.5 428 9-440 15-450 (521)
9 3iwj_A Putative aminoaldehyde 100.0 1.9E-95 7E-100 751.9 51.5 422 15-440 2-437 (503)
10 2o2p_A Formyltetrahydrofolate 100.0 1.7E-95 6E-100 752.8 49.9 416 21-440 37-465 (517)
11 3k2w_A Betaine-aldehyde dehydr 100.0 1.9E-95 6E-100 751.0 49.3 421 16-440 8-436 (497)
12 3u4j_A NAD-dependent aldehyde 100.0 4.8E-95 1.6E-99 751.2 51.3 418 19-440 21-446 (528)
13 3i44_A Aldehyde dehydrogenase; 100.0 4.3E-95 1.5E-99 747.1 50.3 415 19-440 24-447 (497)
14 3qan_A 1-pyrroline-5-carboxyla 100.0 6.7E-95 2.3E-99 751.7 50.0 416 19-440 36-461 (538)
15 3pqa_A Lactaldehyde dehydrogen 100.0 1.1E-94 3.9E-99 742.0 51.1 409 23-440 2-411 (486)
16 3jz4_A Succinate-semialdehyde 100.0 1.8E-94 6.2E-99 741.9 52.3 417 20-440 9-429 (481)
17 1a4s_A ALDH, betaine aldehyde 100.0 1.2E-94 4.2E-99 745.3 50.9 416 19-440 18-444 (503)
18 1bxs_A Aldehyde dehydrogenase; 100.0 1.8E-94 6.2E-99 743.1 51.5 416 20-440 20-444 (501)
19 3r31_A BADH, betaine aldehyde 100.0 8.7E-95 3E-99 747.5 48.8 416 17-440 11-436 (517)
20 1o04_A Aldehyde dehydrogenase, 100.0 1.8E-94 6.1E-99 743.0 50.0 415 21-440 20-443 (500)
21 2imp_A Lactaldehyde dehydrogen 100.0 2E-94 7E-99 741.2 50.0 418 19-440 5-427 (479)
22 2d4e_A 5-carboxymethyl-2-hydro 100.0 3.7E-94 1.3E-98 743.8 52.2 416 20-440 26-453 (515)
23 3b4w_A Aldehyde dehydrogenase; 100.0 2E-94 7E-99 742.3 49.2 416 20-440 8-431 (495)
24 3prl_A NADP-dependent glyceral 100.0 2.7E-94 9.4E-99 742.5 49.9 412 19-440 10-430 (505)
25 1wnd_A Putative betaine aldehy 100.0 4.9E-94 1.7E-98 738.9 49.5 415 20-440 23-443 (495)
26 2w8n_A Succinate-semialdehyde 100.0 6.4E-94 2.2E-98 737.9 50.1 417 19-440 11-434 (487)
27 1uzb_A 1-pyrroline-5-carboxyla 100.0 9.3E-94 3.2E-98 741.6 49.5 415 20-440 37-461 (516)
28 2ve5_A BADH, betaine aldehyde 100.0 1.8E-93 6E-98 736.7 50.4 420 16-440 2-431 (490)
29 4dng_A Uncharacterized aldehyd 100.0 3E-93 1E-97 734.0 48.9 416 18-440 4-425 (485)
30 3r64_A NAD dependent benzaldeh 100.0 6.9E-93 2.4E-97 733.7 51.4 415 18-440 10-432 (508)
31 4e3x_A Delta-1-pyrroline-5-car 100.0 4.4E-93 1.5E-97 739.6 49.2 426 10-440 53-494 (563)
32 3ju8_A Succinylglutamic semial 100.0 2.3E-92 8E-97 727.3 54.1 414 22-440 7-424 (490)
33 1euh_A NADP dependent non phos 100.0 5.1E-93 1.8E-97 730.0 47.7 412 19-440 3-421 (475)
34 3ros_A NAD-dependent aldehyde 100.0 6.1E-93 2.1E-97 728.9 47.6 400 35-440 5-406 (484)
35 1t90_A MMSDH, probable methylm 100.0 5.1E-93 1.8E-97 731.5 47.2 417 19-440 4-425 (486)
36 1uxt_A Glyceraldehyde-3-phosph 100.0 9.7E-93 3.3E-97 730.9 48.2 412 20-440 18-439 (501)
37 3ty7_A Putative aldehyde dehyd 100.0 2.7E-92 9.3E-97 725.7 45.2 413 19-440 6-426 (478)
38 3etf_A Putative succinate-semi 100.0 1.1E-90 3.8E-95 711.3 49.6 404 32-440 5-409 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 8E-90 2.7E-94 751.8 50.6 425 11-440 521-955 (1026)
40 4h7n_A Aldehyde dehydrogenase; 100.0 9.5E-90 3.3E-94 705.6 47.9 402 32-440 4-408 (474)
41 2y53_A Aldehyde dehydrogenase 100.0 1.2E-88 4.2E-93 706.5 44.1 411 20-440 7-455 (534)
42 3v4c_A Aldehyde dehydrogenase 100.0 1.3E-87 4.4E-92 698.0 42.4 419 7-440 16-458 (528)
43 3lns_A Benzaldehyde dehydrogen 100.0 8.1E-85 2.8E-89 666.2 47.1 392 34-440 6-403 (457)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 1E-84 3.6E-89 673.5 42.5 395 32-440 5-423 (510)
45 3sza_A Aldehyde dehydrogenase, 100.0 2.7E-83 9.2E-88 655.5 45.0 377 51-440 13-394 (469)
46 3haz_A Proline dehydrogenase; 100.0 6E-80 2E-84 672.6 46.0 382 50-440 544-932 (1001)
47 3k9d_A LMO1179 protein, aldehy 100.0 9.6E-75 3.3E-79 592.8 32.3 370 49-440 5-389 (464)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 6E-75 2E-79 592.4 29.4 357 37-440 10-379 (463)
49 3my7_A Alcohol dehydrogenase/a 100.0 4.1E-74 1.4E-78 586.3 28.7 364 50-438 1-382 (452)
50 1vlu_A Gamma-glutamyl phosphat 100.0 3.6E-73 1.2E-77 580.1 20.8 348 57-440 15-384 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 3.2E-70 1.1E-74 556.0 34.3 340 55-440 25-383 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 2.1E-70 7.2E-75 554.7 30.0 339 54-440 12-366 (427)
53 4gic_A HDH, histidinol dehydro 93.2 6.7 0.00023 38.2 23.7 163 143-326 118-293 (423)
54 2fiu_A Conserved hypothetical 74.1 9.1 0.00031 29.3 6.6 44 360-422 33-76 (99)
55 1kae_A HDH, histidinol dehydro 69.4 87 0.003 30.5 22.1 160 145-325 114-286 (434)
56 1b93_A Protein (methylglyoxal 55.4 21 0.00072 29.6 5.7 113 156-297 12-135 (152)
57 3lo3_A Uncharacterized conserv 55.3 23 0.00077 26.7 5.5 24 400-423 53-76 (94)
58 2xw6_A MGS, methylglyoxal synt 54.5 6 0.0002 32.3 2.2 58 207-265 43-110 (134)
59 2yvq_A Carbamoyl-phosphate syn 47.8 19 0.00065 29.4 4.3 61 206-267 61-132 (143)
60 1s7i_A Hypothetical protein PA 43.2 68 0.0023 25.4 6.8 28 395-423 81-108 (124)
61 3fgh_A Transcription factor A, 38.5 78 0.0027 21.6 5.8 36 64-99 29-64 (67)
62 1vmd_A MGS, methylglyoxal synt 36.1 26 0.00091 29.8 3.4 118 151-297 22-151 (178)
63 3hhl_A RPA0582; alpha-beta-bar 34.9 71 0.0024 26.0 5.8 66 342-423 45-111 (143)
64 2v9v_A Selenocysteine-specific 32.8 58 0.002 25.7 5.0 82 285-369 34-124 (135)
65 2eqz_A High mobility group pro 31.1 1.1E+02 0.0037 22.2 5.8 36 64-99 48-83 (86)
66 2co9_A Thymus high mobility gr 29.3 1.7E+02 0.0059 21.9 6.9 37 65-101 49-85 (102)
67 1hry_A Human SRY; DNA, DNA-bin 27.7 92 0.0031 21.8 4.8 30 66-95 37-66 (76)
68 1v63_A Nucleolar transcription 26.4 1.4E+02 0.0047 22.5 5.8 38 64-101 37-74 (101)
69 2crj_A SWI/SNF-related matrix- 25.6 1.1E+02 0.0038 22.4 5.1 35 65-99 39-73 (92)
70 3v42_A Folliculin; tumor suppr 25.6 33 0.0011 30.5 2.3 65 172-247 21-85 (226)
71 2ioj_A Hypothetical protein AF 25.4 49 0.0017 26.5 3.3 46 216-261 53-99 (139)
72 1gt0_D Transcription factor SO 24.4 1.1E+02 0.0037 21.7 4.7 31 65-95 34-64 (80)
73 4es6_A Uroporphyrinogen-III sy 22.5 3.9E+02 0.013 23.3 9.9 93 156-257 104-205 (254)
74 3u2b_C Transcription factor SO 22.1 1E+02 0.0035 21.7 4.1 31 65-95 34-64 (79)
75 3qqw_A Putative citrate lyase; 21.1 4.9E+02 0.017 24.1 9.8 170 181-365 110-321 (332)
76 1j46_A SRY, sex-determining re 20.9 1.8E+02 0.0061 20.9 5.3 30 66-95 37-66 (85)
77 3h75_A Periplasmic sugar-bindi 20.8 4.7E+02 0.016 23.7 15.5 178 158-354 115-309 (350)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.1e-100 Score=780.41 Aligned_cols=418 Identities=29% Similarity=0.536 Sum_probs=395.2
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
+...++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|+.+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999986 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||+.+++. ++..+++.++|++...+.+.+...+.. ++...+++++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999986 699999999999999988877665543 4566788999999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l----~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKL----AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHH----HHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 99999999999999999999999876 5667788999999999999 789999999999999999999999998887
Q ss_pred H-HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 254 Q-TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 254 ~-~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
+ .+++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp 318 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCC
Confidence 6 456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++++++||+++..+++++.++|++++++|+++++||.+.+ ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (490)
T 2wme_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEe
Confidence 99999999999999999999999999999999999998744 36999999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||++||||+|.+++++++
T Consensus 399 ~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~ 431 (490)
T 2wme_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI 431 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999999875
No 2
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3e-97 Score=764.95 Aligned_cols=436 Identities=56% Similarity=0.974 Sum_probs=415.1
Q ss_pred chhhHHHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHH
Q 013505 4 AKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83 (441)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~ 83 (441)
+++++..|+.++.. ...++||||+|+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++
T Consensus 8 ~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~ 86 (500)
T 2j6l_A 8 NQPQYAWLKELGLR-EENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEI 86 (500)
T ss_dssp GSGGGGGGGGGTCC-SEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccchhHHHHhcCCC-CCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 57889999999876 66789999999977788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcC
Q 013505 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (441)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 163 (441)
|+++++.|++++++|+++++.|+|||+.+++.|+..+++.++|++...+.+.+...+...++...+..++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P 166 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITA 166 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECC
Confidence 99999999999999999999999999999999999999999999988877766655443345556778999999999999
Q ss_pred CCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEee
Q 013505 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (441)
Q Consensus 164 ~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ft 243 (441)
||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|+.++++.|++||+|++|+||
T Consensus 167 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FT 246 (500)
T 2j6l_A 167 FNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFT 246 (500)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEE
T ss_pred CcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHH
Q 013505 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (441)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 323 (441)
||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 247 GS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (500)
T 2j6l_A 247 GSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKA 326 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceE
Q 013505 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (441)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~ 402 (441)
++++++|+|.++++++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||+
T Consensus 327 ~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 327 YAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred hhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999999999999999864456999999999 799999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 407 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (500)
T 2j6l_A 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWL 444 (500)
T ss_dssp EEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHH
T ss_pred EEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 99999999999999999999999999999999999875
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=3.9e-97 Score=760.54 Aligned_cols=417 Identities=28% Similarity=0.498 Sum_probs=397.3
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999985 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|++++++|+|||+.+++.|+..+++.++|++...++..+...+...++...+++++|+|||++|+|||||+...++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999888776655554334567788999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAM----AFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999876 5668889999999999999 778999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 248 a~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 248 APTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~ 415 (441)
+++||+++..++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999875557999999999 8999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 416 INNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 416 ~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+++|||+++|||+|.+++++++
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~ 432 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVA 432 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHH
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999998874
No 4
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.1e-96 Score=757.37 Aligned_cols=414 Identities=28% Similarity=0.497 Sum_probs=395.3
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|++++++|
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 112 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDI 112 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999986 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
+++++.|+|||+.+++.|+..+++.++|++...++..+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 113 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 192 (504)
T 3ek1_A 113 ALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPA 192 (504)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766655544455677889999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.++
T Consensus 193 LaaGN~VVlKPs~~tp~t~~~l----~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 193 LAAGCTMIVRPADLTPLTALAL----GVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHcCCEEEEECCCcChHHHHHH----HHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 9999999999999999999875 5678889999999999998 7789999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 337 (441)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 348 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGV 348 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~ 416 (441)
++||+++..++++++++|++++++|+++++||.. .+|+|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus 349 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 349 VIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 36899999999 89999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEecCCHHHHHhhh
Q 013505 417 NNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 417 ~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+++|||+++|||+|.+++++++
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHH
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHH
Confidence 999999999999999999998874
No 5
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=6.3e-97 Score=760.88 Aligned_cols=428 Identities=25% Similarity=0.424 Sum_probs=397.1
Q ss_pred HHHHHhccCCCCCCCceecCeeccCCC-eEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 8 YEFLSEIGLSPETPGCFVNGKWKAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 8 ~~~~~~~~~~~~~~~~~I~g~~~~~~~-~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
+++++-....|...++||||+|+.+.. +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|+.+|.++|++
T Consensus 13 ~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~ 92 (498)
T 4f3x_A 13 LGTENLYFQSMMDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLK 92 (498)
T ss_dssp ----------CCCCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCccchhhhhccccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 356666667778889999999987433 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCC
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
+++.|+++.++|+++++.|+|||+.++ +.|+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||
T Consensus 93 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 172 (498)
T 4f3x_A 93 IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWN 172 (498)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCc
Confidence 999999999999999999999999999 8899999999999999888766554443234566788999999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|+++..+ .+++.++ +|+|++|+|+| +.++++.|+.||+|++|+|||
T Consensus 173 ~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l----~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTG 247 (498)
T 4f3x_A 173 YPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKL----ARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITG 247 (498)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEES
T ss_pred hHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHH----HHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEEC
Confidence 99999999999999999999999999999999976 5567788 99999999999 788999999999999999999
Q ss_pred ChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHH
Q 013505 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (441)
Q Consensus 245 s~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 324 (441)
|+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 248 S~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (498)
T 4f3x_A 248 DIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327 (498)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCC-EEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceE
Q 013505 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (441)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~ 402 (441)
+++++|+|+++++++||+++..+++++.++|++++++|+ ++++||...+..|+|++|||+ +++++|++++||+||||+
T Consensus 328 ~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 407 (498)
T 4f3x_A 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVV 407 (498)
T ss_dssp TTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEE
Confidence 999999999999999999999999999999999999999 999999876568999999999 899999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 408 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 445 (498)
T 4f3x_A 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAA 445 (498)
T ss_dssp EEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999999999999998874
No 6
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.8e-96 Score=759.08 Aligned_cols=417 Identities=31% Similarity=0.519 Sum_probs=396.8
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh--HHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 557899999986 57899999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
++|++++++|+|||+.+++.|+..+++.+++++...+++.+...+...++...++.++|+|||++|+|||||+...++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999888766555443245667889999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l----~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRV----FELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHH----HHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHH----HHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999876 5667789999999999999 7899999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 268 ~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 268 NAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred HhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+++++||+++..++++++++|++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 46999999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||+++|||+|.+++++++
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 458 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVA 458 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999998874
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.2e-96 Score=755.49 Aligned_cols=417 Identities=28% Similarity=0.479 Sum_probs=397.2
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4557899999986 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEE-eccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETW-NPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|+++++.|+|||+.+++.|+..+++.+++++...+++.+...+.. ++...++.+ +|+|||++|+|||||+...++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999988876655433 345677788 99999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~ 244 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAF----FSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHH----HHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHH----HHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999876 5667889999999999999 7789999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 245 ~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp HTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred HhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC-CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
+++++||+++..+++++.++|++++++|+++++||...+. .|+|++|||+ +++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986554 7999999999 8999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||+++|||+|.+++++++
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~ 432 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVA 432 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999875
No 8
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-96 Score=761.44 Aligned_cols=428 Identities=26% Similarity=0.418 Sum_probs=397.1
Q ss_pred HHHHhccCCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 9 EFLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 9 ~~~~~~~~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
....|++.+|...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus 15 ~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~ 94 (521)
T 4e4g_A 15 TENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMK 94 (521)
T ss_dssp ---------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred chhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 45678888888889999999986 4689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCc
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNF 166 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 166 (441)
+++.|++++++|++++++|+|||+.+++.|+..+++.++|++...+.+.+...+...++...++.++|+|||++|+||||
T Consensus 95 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 174 (521)
T 4e4g_A 95 FVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNF 174 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcc
Confidence 99999999999999999999999999999999999999999988777666544322234567889999999999999999
Q ss_pred hHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCCh
Q 013505 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246 (441)
Q Consensus 167 P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~ 246 (441)
|+...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+
T Consensus 175 P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~ 250 (521)
T 4e4g_A 175 PGMIPMWMFAPAIACGNAFILKPSERDPSVPIRL----AELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250 (521)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCH
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCH
Confidence 9999999999999999999999999999999876 566788999999999999977888999999999999999999
Q ss_pred HHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecc-cHHHHHHHHHHHHH
Q 013505 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYK 325 (441)
Q Consensus 247 ~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~ 325 (441)
.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++
T Consensus 251 ~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~ 330 (521)
T 4e4g_A 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVE 330 (521)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc----CCCCceEeeEEE-EcCCCCCccccccccc
Q 013505 326 QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI----ESEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 326 ~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++|+|.++++++||+++..+++++.++|++++++|+++++||... +.+|+|++|||+ +++++|++++||+|||
T Consensus 331 ~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 410 (521)
T 4e4g_A 331 SLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGP 410 (521)
T ss_dssp TCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred hccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCc
Confidence 99999999999999999999999999999999999999999999753 247999999999 8999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 411 Vl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 450 (521)
T 4e4g_A 411 VLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFA 450 (521)
T ss_dssp EEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999999999999998875
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.9e-95 Score=751.92 Aligned_cols=422 Identities=31% Similarity=0.515 Sum_probs=396.5
Q ss_pred cCCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-----HhhCCCHHHHHHHHHHH
Q 013505 15 GLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-----IWMELPAPKRGEVVRQI 87 (441)
Q Consensus 15 ~~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~ 87 (441)
+++....++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++
T Consensus 2 ~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~ 81 (503)
T 3iwj_A 2 DIPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAI 81 (503)
T ss_dssp --CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHH
T ss_pred CCCCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHH
Confidence 45566778999999986 567899999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccc---cCCCCCceeEEEEeccceEEEEcCC
Q 013505 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI---PSERPNHMMLETWNPLGVVGVITAF 164 (441)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~ 164 (441)
++.|++|+++|++++++|+|||+.+++.|+..+++.+++++...+.+.+... .....+...++.++|+|||++|+||
T Consensus 82 a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 161 (503)
T 3iwj_A 82 AAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPW 161 (503)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCC
Confidence 9999999999999999999999999999999999999999998877654331 1112345678899999999999999
Q ss_pred CchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEee
Q 013505 165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFT 243 (441)
Q Consensus 165 n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ft 243 (441)
|||+...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||
T Consensus 162 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FT 237 (503)
T 3iwj_A 162 NYPMLMATWKVAPALAAGCAAILKPSELASLTCLEL----GEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFT 237 (503)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEE
T ss_pred chHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999876 5667889999999999999 67899999999999999999
Q ss_pred CChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHH
Q 013505 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (441)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 323 (441)
||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 238 GS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 317 (503)
T 3iwj_A 238 GSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKW 317 (503)
T ss_dssp SCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccc
Q 013505 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++++|+|+++++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+ +++++|++++||+|||
T Consensus 318 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 397 (503)
T 3iwj_A 318 IKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGP 397 (503)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCc
Confidence 99999999999999999999999999999999999999999999998654 57999999999 8999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 398 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 437 (503)
T 3iwj_A 398 VLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVT 437 (503)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999999999999998874
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.7e-95 Score=752.80 Aligned_cols=416 Identities=26% Similarity=0.503 Sum_probs=393.0
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|+.+|.++|+++++.|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999986 367899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCC---CCCceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
+|++++++|+|||+.+++ .|+..+++.++|++...+++.+..++.. .++...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999998888766544432 123356788999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~ 272 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKF----AELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHH----HHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999876 5667889999999999999 7789999999999999999999999999
Q ss_pred HHHHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 252 i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG 352 (517)
T 2o2p_A 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352 (517)
T ss_dssp HHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
||+++++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 353 dp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 999999999999999999999999999999999999999864446999999999 8999999999999999999999999
Q ss_pred --HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 --FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 --~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|||+++|+++|||+++|||+|.+++++++
T Consensus 433 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 465 (517)
T 2o2p_A 433 GDVDAVLSRANATEFGLASGVFTRDINKALYVS 465 (517)
T ss_dssp TCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHH
Confidence 9999999999999999999999999998874
No 11
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.9e-95 Score=751.03 Aligned_cols=421 Identities=28% Similarity=0.511 Sum_probs=396.6
Q ss_pred CCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh
Q 013505 16 LSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93 (441)
Q Consensus 16 ~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 93 (441)
.++...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 87 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRE 87 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 3456678999999986 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+.++|+++++.|+|||+.+++.|+..+++.+++++...+++.+...+...++...+..++|+|||++|+|||||+...++
T Consensus 88 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 167 (497)
T 3k2w_A 88 NKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGR 167 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999998887766554433456678899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 168 ~~~~ALaaGN~VVlKps~~tp~t~~~l----~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i 243 (497)
T 3k2w_A 168 KIGPALITGNTMVLKPTQETPLATTEL----GRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI 243 (497)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHH----HHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 999999999999999999999999876 5667889999999999999 78899999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 244 YKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcc--cCC--CCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++++++||+++..+++++.++|++++++|+++++||.. .+. .|+|++|||+ +++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 333 6999999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 436 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAI 436 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999998874
No 12
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.8e-95 Score=751.21 Aligned_cols=418 Identities=28% Similarity=0.500 Sum_probs=396.9
Q ss_pred CCCCceecCeecc--CCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHh--HHhhCCCHHHHHHHHHHHHHHHHh
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALRE 93 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 93 (441)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++..+|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4567999999986 467999999999 99999999999999999999999999 789999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
++++|+++++.|+|||+.+++.|+..+++.++++++..+++.+...+...++...++.++|+|||++|+|||||+...++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999998887665554432455678899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRL----AELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHH----HHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 999999999999999999999999876 5567788999999999999 88999999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC-CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
+++++++||+++..+++++.++|++++++|+++++||...+. .|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 999999999999999999999999999999999999987544 7999999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||+++|||+|.+++++++
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 446 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTI 446 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 999999999999999999999999998874
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=4.3e-95 Score=747.08 Aligned_cols=415 Identities=24% Similarity=0.441 Sum_probs=388.9
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999986 45689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEE-EeccceEEEEcCCCchHHhHHHH
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET-WNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
+|+++++.|+|||+.+++ .|+..+++.+++++...+......... ++...++. ++|+|||++|+|||||+...+++
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 999999999999999999 899999999999988766543322111 13345667 99999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|+
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLF----AEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHH----HHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 99999999999999999999999875 6678899999999999999 789999999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
+.+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 258 ~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 336 (497)
T 3i44_A 258 KNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGH 336 (497)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCc-ccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS-VIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
++++++||++++.++++++++|++++++|+++++||. ..+ ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 416 (497)
T 3i44_A 337 QTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT 416 (497)
T ss_dssp SCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC
Confidence 9999999999999999999999999999999999994 332 26999999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 417 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 447 (497)
T 3i44_A 417 EDEAVTLANDTEYGLTNYIQSQDRSKCRRIA 447 (497)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999998874
No 14
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=6.7e-95 Score=751.68 Aligned_cols=416 Identities=30% Similarity=0.515 Sum_probs=395.7
Q ss_pred CCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
...++||||+|+.++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|++++++
T Consensus 36 ~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 36 KEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp EEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999988888999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHh-hhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
|+++++.|+|||+.+++.|+..+++.+++++.. .+...+...+.. ++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 194 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAV 194 (538)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999988 566666655432 355678899999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.
T Consensus 195 ~ALaaGN~VVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 195 APIVTGNTVVLKPASTTPVVAAKF----VEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHTTCEEEEECCTTSHHHHHHH----HHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCccHHHHHHH----HHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999875 6678889999999999999 78899999999999999999999999999999
Q ss_pred hhcc------CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc
Q 013505 256 VHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 256 a~~~------~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 329 (441)
++++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 271 aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp HTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 9988 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeC
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~ 408 (441)
|+|+++++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 999999875447999999999 899999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|||+++|+++|||+++|||+|.+++++++
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 461 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAK 461 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 99999999999999999999999999998874
No 15
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.1e-94 Score=741.98 Aligned_cols=409 Identities=30% Similarity=0.544 Sum_probs=386.6
Q ss_pred ceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 013505 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL 102 (441)
Q Consensus 23 ~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 102 (441)
+||||+|+.+++ ++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999998777 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCC
Q 013505 103 SIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182 (441)
Q Consensus 103 ~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaG 182 (441)
+.|+|||..+++.|+..+++.+++++...+.+.+...+. ++...++.++|+|||++|+|||||+...++++++||++|
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999988876655543 255678899999999999999999999999999999999
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCC
Q 013505 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (441)
Q Consensus 183 N~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (441)
|+||+|||+.+|+++..+++++.++++++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ ++
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~ 236 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FK 236 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CC
Confidence 99999999999999999999999999999999999999999 7788999999999999999999999999999887 89
Q ss_pred ceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCC
Q 013505 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341 (441)
Q Consensus 262 ~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 341 (441)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||
T Consensus 237 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 316 (486)
T 3pqa_A 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGP 316 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCC
T ss_pred ceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCC
Q 013505 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP 421 (441)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~ 421 (441)
+++..+++++.++|++++++|+++++||.. .|+|++|||++++++|++++||+||||++|++|+| ||||+++|+++
T Consensus 317 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~ 392 (486)
T 3pqa_A 317 LISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTE 392 (486)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCC
Confidence 999999999999999999999999999975 68999999999999999999999999999999999 99999999999
Q ss_pred CCcEEEEecCCHHHHHhhh
Q 013505 422 QGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 422 ~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|||+|.+++++++
T Consensus 393 ~gL~a~v~t~d~~~a~~~~ 411 (486)
T 3pqa_A 393 YGLHSAIFTNDINKSLKFA 411 (486)
T ss_dssp CCSEEEEECSBHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHH
Confidence 9999999999999998874
No 16
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.8e-94 Score=741.91 Aligned_cols=417 Identities=28% Similarity=0.545 Sum_probs=396.4
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999986 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|+++++.|+|||..+++.|+..+++.+++++.......+...+...++...+.+++|+|||++|+|||||+...++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998877766555544334566788999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALAL----AELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999876 5668889999999999999 789999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 245 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp TTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred hhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~ 415 (441)
+++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 999999999999999999999999999999999875556899999999 8999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 416 INNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 416 ~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+++|||+++|||+|.+++++++
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~ 429 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVG 429 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred HHhcCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999998874
No 17
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.2e-94 Score=745.32 Aligned_cols=416 Identities=27% Similarity=0.486 Sum_probs=393.1
Q ss_pred CCCCceecCeecc--CCCe-EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 19 ETPGCFVNGKWKA--HGPT-VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~-~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
...++||||+|+. ++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|.
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4467899999986 3567 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
++|+++++.|+|||+.+++.|+..+++.++|++...+++.+...+.. ++...++.++|+|||++|+|||||+...++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999998888765544432 34456788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| + ++++.|+.||+|++|+||||+.+|+.|++
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l----~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 251 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVIL----AEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999876 5667889999999999999 6 89999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 252 ~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc--C----CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI--E----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++++||+++..++++++++|++++++|+++++||+.. + ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 99999999999999999999999999999999999764 2 35899999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVA 444 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999999998874
No 18
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=1.8e-94 Score=743.12 Aligned_cols=416 Identities=29% Similarity=0.519 Sum_probs=393.0
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 446899999986 367899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+++|++++++|+|||+.++. .|+..+++.+++++...+++.+...+. .++...++.++|+|||++|+|||||+...++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999874 699999999999999888876654443 2344567889999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i 254 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHM----GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 254 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHH----HHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999876 5667889999999999999 88899999999999999999999999999
Q ss_pred HHHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCC
Q 013505 253 QQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (441)
Q Consensus 253 ~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 331 (441)
++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 255 ~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (501)
T 1bxs_A 255 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334 (501)
T ss_dssp HHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
|+++++++||+++..++++++++|++++++|+++++||+..+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 335 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999999864446999999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||||+++|+++|||+++|||+|.+++++++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVS 444 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHH
Confidence 999999999999999999999999998874
No 19
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.7e-95 Score=747.49 Aligned_cols=416 Identities=28% Similarity=0.495 Sum_probs=393.8
Q ss_pred CCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 17 ~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
++...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 355678999999985 567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhh----hcCccccCCCCCceeEEEEeccceEEEEcCCCchHHh
Q 013505 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ----LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAV 170 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 170 (441)
+++|+++++.|+|||+.++ |+..+++.+++++...+. +.+...+.. ++. .++.++|+|||++|+|||||+..
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~-~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPLG-GDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS-SSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccccC-CCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999998 999999999999998887 666655432 344 78899999999999999999999
Q ss_pred HHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHH
Q 013505 171 LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250 (441)
Q Consensus 171 ~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (441)
.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l----~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKI----AEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHH----HHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHH----HHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 999999999999999999999999999876 5667889999999999999888999999999999999999999999
Q ss_pred HHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 251 ~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCCceEeeEEE-EcCCCCCccccccccceEEEEE
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~ 406 (441)
+|+++++++||++++.++++++++|++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993122 36999999999 8999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 436 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999875
No 20
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.8e-94 Score=742.98 Aligned_cols=415 Identities=29% Similarity=0.497 Sum_probs=392.1
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999986 467899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|+++++.|+|||+.++. .|+..+++.++|+++..+++.+..++. .++...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 178 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHH
Confidence 9999999999999999874 699999999999999888776654443 23445678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|+
T Consensus 179 ~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 179 LGPALATGNVVVMKVAEQTPLTALYV----ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccChHHHHHH----HHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999876 5667889999999999999 888999999999999999999999999999
Q ss_pred HHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 254 QTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 254 ~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
+.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 334 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 334 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++++++||+++..++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 335 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 9999999999999999999999999999999999999764346999999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLS 443 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
No 21
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2e-94 Score=741.18 Aligned_cols=418 Identities=29% Similarity=0.523 Sum_probs=394.5
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999986 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+++.+...+...++...+..++|+|||++|+|||||+...+++++
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 164 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMA 164 (479)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999888776665544333445678899999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.
T Consensus 165 ~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 240 (479)
T 2imp_A 165 PALLTGNTIVIKPSEFTPNNAIAF----AKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAT 240 (479)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCccchHHHHHH----HHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999976 5567789999999999999 67789999999999999999999999999999
Q ss_pred hhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC-
Q 013505 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE- 334 (441)
Q Consensus 256 a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~- 334 (441)
++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 241 aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 241 AAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred HhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+ +++++|++++||+||||++|++|+|+|||
T Consensus 321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999764446999999999 89999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++++
T Consensus 401 i~~aN~~~~gL~a~v~t~d~~~~~~~~ 427 (479)
T 2imp_A 401 ISMANDSDYGLTSSIYTQNLNVAMKAI 427 (479)
T ss_dssp HHHHHCSSEESEEEEECCCHHHHHHHH
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHH
Confidence 999999999999999999999998875
No 22
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.7e-94 Score=743.82 Aligned_cols=416 Identities=27% Similarity=0.483 Sum_probs=393.2
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999986 467899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|+++++.|+|||+.+++.|+..+++.++++++..+++.+..++...++...++.++|+|||++|+|||||+...++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999888876655443233456688999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~a 261 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKL----AEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeeeecCCCCcHHHHHHH----HHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999876 5667789999999999999 678999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 262 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 262 ADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--------CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++||+++..++++++++|++++++|+++++||...+ ..|+|++|||+ + +++|++++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997643 26999999999 8 999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 421 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 453 (515)
T 2d4e_A 421 KDEEEALRKANDTKYGLAAYVFTRDLERAHRLA 453 (515)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999999998874
No 23
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-94 Score=742.33 Aligned_cols=416 Identities=28% Similarity=0.458 Sum_probs=392.9
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|+.+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999986 367899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||+.+++ .|+..+++.+++++...+++.+..++.. .+...+..++|+|||++|+|||||+...+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999997 8999999999999998888766544322 2335678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~ 242 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANAL----AEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGR 242 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHH----HHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHH----HHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999876 56677899999999999998889999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 243 ~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 322 (495)
T 3b4w_A 243 RAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322 (495)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTC
T ss_pred HhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++++||+++..+++++.+++++++++|+++++||+..+ ..|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 323 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (495)
T 3b4w_A 323 PAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEE 402 (495)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHH
Confidence 999999999999999999999999999999999997643 36999999999 799999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 431 (495)
T 3b4w_A 403 DAIAIANDSVYGLAGSVWTTDVPKGIKIS 431 (495)
T ss_dssp HHHHHHHCSSCCSCCEEECSCHHHHHHHH
T ss_pred HHHHHHhcCCCCeEEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.7e-94 Score=742.47 Aligned_cols=412 Identities=27% Similarity=0.504 Sum_probs=390.2
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4457899999986 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCC-C----CceeEEEEeccceEEEEcCCCchHHhH
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER-P----NHMMLETWNPLGVVGVITAFNFPCAVL 171 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 171 (441)
+|+++++.|+|||..+++.|+..+++.+++++...+++.+...+... + +...++.++|+|||++|+|||||+...
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999988877665443221 2 345678899999999999999999999
Q ss_pred HHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHH
Q 013505 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250 (441)
Q Consensus 172 ~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (441)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l----~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKM----VEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999875 6778899999999999999 789999999999999999999999999
Q ss_pred HHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 251 ~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999987 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
||+ +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 6899999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 400 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 430 (505)
T 3prl_A 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIG 430 (505)
T ss_dssp HHHHHHHHHTSSEESEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999998874
No 25
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=4.9e-94 Score=738.88 Aligned_cols=415 Identities=28% Similarity=0.483 Sum_probs=391.2
Q ss_pred CCCceecCeeccC-CCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 20 TPGCFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 20 ~~~~~I~g~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
..++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 23 ~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 102 (495)
T 1wnd_A 23 QHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF 102 (495)
T ss_dssp CCCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999863 478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 99 GRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
+++++.|+|||+.+++. |+..+++.++++++..+++.+..++...++...++.++|+|||++|+|||||+...++++++
T Consensus 103 a~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 182 (495)
T 1wnd_A 103 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 182 (495)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHH
Confidence 99999999999999988 99999999999998887766554433223445678899999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++ +|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 183 ALaaGN~VVlKps~~tp~t~~~l----~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 257 (495)
T 1wnd_A 183 ALAAGNCVVLKPSEITPLTALKL----AELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257 (495)
T ss_dssp HHHTTCEEEEECCTTCCHHHHHH----HHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeeEeeCCCCChHHHHHH----HHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999976 5667778 99999999999 788999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 258 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 258 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred HhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCC-CEEEecCc-ccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQG-GKILTGGS-VIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+++||+++..++++++++|++++++| +++++||. .. ..|+|++|||+ +++++|++++||+||||++|++|+|+|||
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 416 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQV 416 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999 99999997 43 26999999999 89999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++++
T Consensus 417 i~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (495)
T 1wnd_A 417 VNWANDSQYGLASSVWTKDVGRAHRVS 443 (495)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHH
Confidence 999999999999999999999998874
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=6.4e-94 Score=737.85 Aligned_cols=417 Identities=27% Similarity=0.492 Sum_probs=394.7
Q ss_pred CCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
...++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|
T Consensus 11 ~~~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 11 LRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CCCSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33568999999875478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
+++++.|+|||+.+++.|+..+++.++++++..+++.+...+...++...+..++|+|||++|+|||||+...++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998888766654432345567888999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEec---C-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC---G-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~---g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+ | +.++++.|++||+|++|+||||+.+|+.|++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 246 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALAL----AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHH
T ss_pred HHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999875 566788999999999999 8 7889999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh-hccCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDPL 333 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~ 333 (441)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 247 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 247 HAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCc-eEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
++++++||+++..++++++++|++++++|+++++||+.. ..|+ |++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999763 3689 9999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||++||||+|.+++++++
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 434 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVA 434 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHH
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHH
Confidence 99999999999999999999999998874
No 27
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=9.3e-94 Score=741.57 Aligned_cols=415 Identities=28% Similarity=0.511 Sum_probs=391.4
Q ss_pred CCCceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 20 TPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 20 ~~~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
..++||||+|+.++.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|
T Consensus 37 ~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 116 (516)
T 1uzb_A 37 HYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKREL 116 (516)
T ss_dssp EECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999777889999999 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcccc-CCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
+++++.|+|||+.+++.|+..+++.++|++...+++.+...+ ...++...++.++|+|||++|+|||||+...++++++
T Consensus 117 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 196 (516)
T 1uzb_A 117 EATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVG 196 (516)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999888877665432 2223456678899999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 197 ALaaGN~VVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 197 PVAVGNTVIAKPAEDAVVVGAKV----FEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHH----HHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeEEEeCCCCCHHHHHHH----HHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999876 5667789999999999999 888999999999999999999999999999999
Q ss_pred h------ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 257 H------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 257 ~------~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 8 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+| ++++++||++++.++++++++|++++++| ++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999998 999999753346999999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|||+++|+++|||+++|||+|.+++++++
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 461 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWAR 461 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999999999998874
No 28
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.8e-93 Score=736.69 Aligned_cols=420 Identities=29% Similarity=0.537 Sum_probs=397.7
Q ss_pred CCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh
Q 013505 16 LSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93 (441)
Q Consensus 16 ~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 93 (441)
+++...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++
T Consensus 2 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2ve5_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 4567788999999986 56799999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 94 KLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
|.++|+++++.|+|||..+++. |+..+++.+++++...+.+.+...+. .++...++.++|+|||++|+|||||+...+
T Consensus 82 ~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 160 (490)
T 2ve5_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHH
Confidence 9999999999999999999986 99999999999999888766554433 235567889999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.
T Consensus 161 ~~~~~ALaaGN~vVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~ 236 (490)
T 2ve5_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKL----AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKK 236 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHH
Confidence 9999999999999999999999999876 5667788999999999999 8899999999999999999999999999
Q ss_pred HHHHh-hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 252 VQQTV-HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 252 i~~~a-~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
|++.+ +++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|
T Consensus 237 i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 316 (490)
T 2ve5_A 237 VMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316 (490)
T ss_dssp HHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBS
T ss_pred HHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCC
Confidence 99999 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEE
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVM 405 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~ 405 (441)
+|.++++++||+++..+++++.++|++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|+
T Consensus 317 ~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~ 396 (490)
T 2ve5_A 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSIL 396 (490)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEE
Confidence 9999999999999999999999999999999999999998632 36999999999 899999999999999999999
Q ss_pred EeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 406 KFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 406 ~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+|++|||+++|+++|||+++|||+|.+++++++
T Consensus 397 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 431 (490)
T 2ve5_A 397 VYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI 431 (490)
T ss_dssp EESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred EeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999999999999999998874
No 29
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=3e-93 Score=734.03 Aligned_cols=416 Identities=28% Similarity=0.432 Sum_probs=391.5
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
+...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999985 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCC-CCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+.. .++...+++++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999888776655432 23466788999999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhH-HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~-~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
+++||++||+||+|||+.+|+++ ..+ .++|.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTII----AKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHH----HHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHH----HHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 99999999999999999999999 764 6778999999999999999 56799999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
.++++++||+++..+.+++.+++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|++
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999976 6999999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~ 425 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFA 425 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999999875
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.9e-93 Score=733.72 Aligned_cols=415 Identities=26% Similarity=0.469 Sum_probs=394.4
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
.+..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999985 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCC-CCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|+++++.|+|||..+++.|+..+++.+++++...+...+ ..+.. .++...++.++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999988877665 44432 24567788999999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhH-HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~-~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
+++||++||+||+|||+.+|+++ ..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l----~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIP----ARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHH----HHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 99999999999999999999999 764 6778999999999999999 68999999999999999999999999999
Q ss_pred HHHhhc--cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 253 QQTVHQ--RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 253 ~~~a~~--~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
++.+++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+|.++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999999999999999999999999999999999999975 6899999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 432 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFA 432 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999875
No 31
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.4e-93 Score=739.60 Aligned_cols=426 Identities=25% Similarity=0.377 Sum_probs=394.3
Q ss_pred HHHhccCCCCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHH
Q 013505 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (441)
Q Consensus 10 ~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (441)
++++++.....+++||||+|+.++..+.++||.| |+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|++++
T Consensus 53 a~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a 132 (563)
T 4e3x_A 53 ALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAA 132 (563)
T ss_dssp HHHTTTTCCEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 4455666666789999999998777888999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHhh-HHHHHHHHHHHhCCChhhhhHH-HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCc
Q 013505 89 DALREK-LHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNF 166 (441)
Q Consensus 89 ~~l~~~-~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 166 (441)
+.|+++ +++|+++++.|+|||+.+++.+ +..+++.+++++...+++.+.......++...+.++.|+|||++|+||||
T Consensus 133 ~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNf 212 (563)
T 4e3x_A 133 DMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNF 212 (563)
T ss_dssp HHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSC
T ss_pred HHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchH
Confidence 999999 9999999999999999999887 99999999999999888766433222223345566778899999999999
Q ss_pred hHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCC
Q 013505 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245 (441)
Q Consensus 167 P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs 245 (441)
|+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.++++.|++||+|++|+||||
T Consensus 213 P~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l----~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGS 287 (563)
T 4e3x_A 213 TAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAV----YRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGS 287 (563)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESC
T ss_pred HHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHH----HHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECC
Confidence 9999999999999 59999999999999999875 6678899999999999999 6789999999999999999999
Q ss_pred hHHHHHHHHHhhccCCc------eeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHH
Q 013505 246 TKVGLMVQQTVHQRFGK------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (441)
Q Consensus 246 ~~~g~~i~~~a~~~~~~------~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (441)
+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++
T Consensus 288 t~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~ 367 (563)
T 4e3x_A 288 VPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGR 367 (563)
T ss_dssp HHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHH
Confidence 99999999999988884 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCC-CCCCCccCCCCChhHHHHHHHHHHHHHH-CCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccc
Q 013505 320 LVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEE 396 (441)
Q Consensus 320 l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE 396 (441)
|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+++++||...+..|+|++|||+ +++++|++++||
T Consensus 368 l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eE 447 (563)
T 4e3x_A 368 LLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEE 447 (563)
T ss_dssp HHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSC
T ss_pred HHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCC
Confidence 9999999999999 9999999999999999999999999996 899999999876668999999999 899999999999
Q ss_pred cccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHhhh
Q 013505 397 LFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 397 ~fgPv~~v~~~~~--~~eai~~~-n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||++|++|+| ++|||+++ |+++|||+++|||+|.++++++.
T Consensus 448 iFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~ 494 (563)
T 4e3x_A 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEAT 494 (563)
T ss_dssp CCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHH
T ss_pred CcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHH
Confidence 9999999999997 79999999 79999999999999999887763
No 32
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.3e-92 Score=727.29 Aligned_cols=414 Identities=26% Similarity=0.446 Sum_probs=392.0
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+. .+.++.++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 7 ~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 86 (490)
T 3ju8_A 7 THYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELAR 86 (490)
T ss_dssp CEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999987 456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
+++.|+|||+.+++.|+..+++.+++++...+...+...+.. ++...+.+++|+|||++|+|||||+...++++++||+
T Consensus 87 ~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 165 (490)
T 3ju8_A 87 VIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALL 165 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHH
Confidence 999999999999999999999999999988877766543321 2344566799999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccC
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 260 (441)
+||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 166 aGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 241 (490)
T 3ju8_A 166 AGNCVVFKPSELTPKVAELT----LKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQP 241 (490)
T ss_dssp HTCEEEEECCTTCHHHHHHH----HHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCT
T ss_pred cCCeEEEECCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccC
Confidence 99999999999999999875 66788899999999999998899999999999999999999999999999999999
Q ss_pred Cce-eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEeccc-HHHHHHHHHHHHHhhccCC-CCCCCC
Q 013505 261 GKC-LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIGD-PLEKGT 337 (441)
Q Consensus 261 ~~~-~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~~~~~ 337 (441)
+|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.++.+
T Consensus 242 ~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~ 321 (490)
T 3ju8_A 242 QKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAP 321 (490)
T ss_dssp TSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCC
T ss_pred CCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcC
Confidence 998 7999999999999999999999999999999999999999999999996 9999999999999999999 999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~ 417 (441)
++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+.++++|++++||+||||++|++|+|++|||+++
T Consensus 322 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 401 (490)
T 3ju8_A 322 FMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREA 401 (490)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999876668999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEecCCHHHHHhhh
Q 013505 418 NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 418 n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|||+++|||+|.+++++++
T Consensus 402 N~~~~gL~a~v~t~d~~~a~~~~ 424 (490)
T 3ju8_A 402 NATQYGLAAGLLSDSRERFEQFL 424 (490)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHH
T ss_pred hcCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999998874
No 33
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=5.1e-93 Score=730.04 Aligned_cols=412 Identities=26% Similarity=0.492 Sum_probs=387.8
Q ss_pred CCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
.++++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|.++|
T Consensus 3 ~~~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 3 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 34578999999874449999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCC----cee-EEEEeccceEEEEcCCCchHHhHHH
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPN----HMM-LETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+++++.|+|||+.+++.|+..+++.+++++...+++.+...+...++ ... +..++|+|||++|+|||||+...++
T Consensus 83 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (475)
T 1euh_A 83 GAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGS 162 (475)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHH
Confidence 99999999999999999999999999999988877655543322233 355 8899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 163 ~~~~ALaaGN~vVlKps~~tp~t~~~l----~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 163 KIAPALIAGNVIAFKPPTQGSISGLLL----AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHTTCEEEEECCSTTHHHHHHH----HHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEeCCCcChHHHHHH----HHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 999999999999999999999999976 5567789999999999999 57789999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 239 ~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 99887 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
++ ++++||+++..+++++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 99 999999999999999999999999999999999975 5899999999 799999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 393 eai~~an~~~~gL~a~v~t~d~~~~~~~~ 421 (475)
T 1euh_A 393 EAIEISNKSEYGLQASIFTNDFPRAFGIA 421 (475)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHH
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHH
Confidence 99999999999999999999999998875
No 34
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.1e-93 Score=728.85 Aligned_cols=400 Identities=25% Similarity=0.424 Sum_probs=381.9
Q ss_pred eEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh
Q 013505 35 TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI 114 (441)
Q Consensus 35 ~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 114 (441)
+++++||+||+++++++.++.+|+++++++|++||+.|+.+++.+|.++|+++++.|++++++|+++++.|+|||+.+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCCh
Q 013505 115 GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194 (441)
Q Consensus 115 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p 194 (441)
.|+..+++.+++++...+++.+...+.. ++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999998888766554432 455778899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeE
Q 013505 195 LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (441)
Q Consensus 195 ~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~ 273 (441)
+++..+ .+++.++|+|+|++|+|+| +.++++ |+.||+|++|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 164 ~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 164 GSAALT----AKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238 (484)
T ss_dssp HHHHHH----HHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEE
T ss_pred HHHHHH----HHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcc
Confidence 999875 5667888999999999999 566777 9999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHH
Q 013505 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (441)
Q Consensus 274 iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (441)
||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+++..+++++++
T Consensus 239 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~ 318 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC
Q 013505 354 GIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432 (441)
Q Consensus 354 ~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d 432 (441)
+|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 319 ~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 398 (484)
T 3ros_A 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSD 398 (484)
T ss_dssp HHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSC
T ss_pred HHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 9999999999999999876668999999999 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 013505 433 PENIFKWL 440 (441)
Q Consensus 433 ~~~~~~~~ 440 (441)
.+++++++
T Consensus 399 ~~~a~~~~ 406 (484)
T 3ros_A 399 IDRAKKVS 406 (484)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.1e-93 Score=731.50 Aligned_cols=417 Identities=28% Similarity=0.489 Sum_probs=391.2
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999986 45789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...+++++
T Consensus 84 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 163 (486)
T 1t90_A 84 ELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFP 163 (486)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHH
Confidence 99999999999999999999999999999998777766655433212344567889999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 164 ~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~a 239 (486)
T 1t90_A 164 MAIALGNTFILKPSERTPLLTEKL----VELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKG 239 (486)
T ss_dssp HHHHTTCEEEEECCSSSCHHHHHH----HHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999876 5667889999999999999778999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcce-EEEecccHHHHHHHHHHHHHhhccCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR-LLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 335 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|+++
T Consensus 240 a~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 240 SENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred hccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 9999999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999997432 36899999999 79999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++++
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~ 425 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFR 425 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHH
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 999999999999999999999998874
No 36
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=9.7e-93 Score=730.88 Aligned_cols=412 Identities=26% Similarity=0.461 Sum_probs=388.8
Q ss_pred CCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-HhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 20 TPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 20 ~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
..++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|+++|
T Consensus 18 ~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 97 (501)
T 1uxt_A 18 VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 97 (501)
T ss_dssp EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 346899999987557899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCC--CC--CceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RP--NHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
+++++.|+|||+.+++.|+..+++.+++++...+++.+..++.. .. +...++.++|+|||++|+|||||+...+++
T Consensus 98 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (501)
T 1uxt_A 98 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177 (501)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999998888766554432 12 235688899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 178 ITYSFIYGNAVVVKPSISDPLPAAMA----VKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHH----HHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999976 56678899999999999994489999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||.+
T Consensus 254 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 331 (501)
T 1uxt_A 254 VGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRD 331 (501)
T ss_dssp HHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccc
Confidence 887 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCC-ceEeeEEE-EcC---CCCCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG-NFVQPTIV-EIS---PTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl-~~~---~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+++++||++++.++++++++|++++++|+++++||.. .| +|++|||+ +++ ++|++++||+||||++|++|+|
T Consensus 332 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~ 408 (501)
T 1uxt_A 332 PTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKD 408 (501)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCC
Confidence 9999999999999999999999999999999999975 58 99999999 799 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 409 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 439 (501)
T 1uxt_A 409 LDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439 (501)
T ss_dssp HHHHHHHHHTSSEESEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH
Confidence 9999999999999999999999999998874
No 37
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.7e-92 Score=725.69 Aligned_cols=413 Identities=26% Similarity=0.456 Sum_probs=389.1
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 85 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKD 85 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567999999986 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|+++++.|+|||+.++ ..|+..+++.+++++...+...+... ....+..++|+|||++|+|||||+...++++
T Consensus 86 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 86 DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 78999999999999988877655431 2346788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~ 236 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVIL----AEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHH----HHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--C
T ss_pred HHHHHcCCeEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999876 5667788999999999999 7899999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus 237 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 316 (478)
T 3ty7_A 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316 (478)
T ss_dssp STTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcc-cC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV-IE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~-~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
+++++||+++..+++++++++++++++|+++++||.. .+ ..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 317 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 9999999999999999999999999999999999943 22 36999999999 79999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||+++|||+|.+++++++
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~ 426 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVA 426 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999998874
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.1e-90 Score=711.26 Aligned_cols=404 Identities=26% Similarity=0.469 Sum_probs=384.4
Q ss_pred CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 112 EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
+++.|+..+++.+++++...+.+.+.. +...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999998888766554 2223455678899999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 271 (441)
.+|.++..+ .+++.++|+|+|++|+|+|+.+.+..|+.||+|+.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 164 ~tp~~~~~l----~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~ 239 (462)
T 3etf_A 164 NVTGCAQMI----ARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239 (462)
T ss_dssp TCHHHHHHH----HHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred CCcHHHHHH----HHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCC
Confidence 999999875 6678899999999999999888899999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHH
Q 013505 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (441)
Q Consensus 272 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (441)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 352 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999999999876668999999999 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.+++++++
T Consensus 400 ~d~~~a~~~~ 409 (462)
T 3etf_A 400 ADDTLAAEMA 409 (462)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999998874
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=8e-90 Score=751.78 Aligned_cols=425 Identities=30% Similarity=0.513 Sum_probs=398.5
Q ss_pred HHhccCC-CCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHH
Q 013505 11 LSEIGLS-PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (441)
Q Consensus 11 ~~~~~~~-~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (441)
++.+... ....++||||+|+.++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.+|+.+|.++|++++
T Consensus 521 ~~~~~~~~~~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~A 600 (1026)
T 4f9i_A 521 IAQVRTQLGKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAA 600 (1026)
T ss_dssp HHHHHTTCCEEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHhhccccccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHH
Confidence 3444443 35678999999998888999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchH
Q 013505 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPC 168 (441)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 168 (441)
+.|++++++|+++++.|+|||+.++..|+..+++.++|++...+.+.+...+...++...+..++|+|||++|+|||||+
T Consensus 601 dll~~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl 680 (1026)
T 4f9i_A 601 QAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPL 680 (1026)
T ss_dssp HHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTT
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHH
Confidence 99999999999999999999999999999999999999999988876654433234556778899999999999999999
Q ss_pred HhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChH
Q 013505 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (441)
Q Consensus 169 ~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (441)
...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.
T Consensus 681 ~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l----~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~ 756 (1026)
T 4f9i_A 681 AISMGMASAAIVTGNCVVFKPSGITSIIGWHL----VELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSME 756 (1026)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCccchHHHHHH----HHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHH
Confidence 99999999999999999999999999999875 6678899999999999999 778999999999999999999999
Q ss_pred HHHHHHHHhh------ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHH
Q 013505 248 VGLMVQQTVH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (441)
Q Consensus 248 ~g~~i~~~a~------~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 321 (441)
+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||++++|+|+++|+
T Consensus 757 vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~ 836 (1026)
T 4f9i_A 757 TGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLV 836 (1026)
T ss_dssp HHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHH
Confidence 9999999988 4789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccc
Q 013505 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++++++|+|.++++++||+++..+.+++.++|++++++| ++++||...+..|+|++|||+ +++++|++++||+|||
T Consensus 837 ~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 837 SMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCc
Confidence 99999999999999999999999999999999999999998 999999765545999999999 7999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|++|||+++|+++|||+++|||+|.++++++.
T Consensus 916 Vl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~ 955 (1026)
T 4f9i_A 916 VLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955 (1026)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH
Confidence 9999999999999999999999999999999999998874
No 40
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=9.5e-90 Score=705.63 Aligned_cols=402 Identities=25% Similarity=0.390 Sum_probs=377.1
Q ss_pred CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|+++|.++|+++++.|++|+++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcCc-cccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecC
Q 013505 112 EGIGEVQEVIDMCDFAVGLSRQLNGS-VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (441)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps 190 (441)
++..|+...++.+++++......... ......++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 55679999999999988877664432 23333345556677899999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCC
Q 013505 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (441)
Q Consensus 191 ~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 270 (441)
+.+|.++..+ .+++.++|+|+|++|+++|+.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||
T Consensus 163 ~~tp~~~~~l----~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk 236 (474)
T 4h7n_A 163 EIAPRFVAPL----LMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGK 236 (474)
T ss_dssp TTSCTTHHHH----HHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCC
T ss_pred ccCchHHHHH----Hhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCc
Confidence 9999998875 567889999999999999988999999986 9999999999999999999999999999999999
Q ss_pred CeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHH
Q 013505 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (441)
Q Consensus 271 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (441)
||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||+++..+.++
T Consensus 237 ~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred CccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013505 351 FEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (441)
Q Consensus 351 ~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv 428 (441)
+.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998644 56899999999 89999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHhhh
Q 013505 429 FTRSPENIFKWL 440 (441)
Q Consensus 429 ~t~d~~~~~~~~ 440 (441)
||+|.+++++++
T Consensus 397 ~t~d~~~a~~~a 408 (474)
T 4h7n_A 397 FAGSEDEALKVA 408 (474)
T ss_dssp ECSSHHHHHHHH
T ss_pred EeCCHHHHHHHH
Confidence 999999999875
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.2e-88 Score=706.52 Aligned_cols=411 Identities=22% Similarity=0.309 Sum_probs=373.3
Q ss_pred CCCceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|..+|.++|+++++.|++|+++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 7 LLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp ECCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 467999999986 34679999999999999999988 8999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC-------ccccCCCCCc-eeEEEEecc-ceEEEEcCCCchH
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG-------SVIPSERPNH-MMLETWNPL-GVVGVITAFNFPC 168 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~P~-Gvv~~i~p~n~P~ 168 (441)
|++++++|+|||+.+++.|+..+++.+++++...+.+.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999988766543 1112221222 356788997 9999999999999
Q ss_pred HhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC-CCCceEEEecC-CHHHHHHHHcC-CCccEEEeeCC
Q 013505 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKD-PRISLVSFTGS 245 (441)
Q Consensus 169 ~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag-lP~gvv~~v~g-~~~~~~~L~~~-~~v~~v~ftGs 245 (441)
.+.++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+| +.+ +..+ +++++|+||||
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l----~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRM----VADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH----HHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999876 56678899 79999999998 443 3343 57999999999
Q ss_pred hHHHHHHHHHhh--ccCCceeecCCCCCeEEEeCCC-----CHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHH
Q 013505 246 TKVGLMVQQTVH--QRFGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (441)
Q Consensus 246 ~~~g~~i~~~a~--~~~~~~~lelgG~~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (441)
+.+|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 317 (534)
T 2y53_A 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317 (534)
T ss_dssp HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence 999999998875 8899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc-----C-CCCceEeeEEE-EcCCC--
Q 013505 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-----E-SEGNFVQPTIV-EISPT-- 389 (441)
Q Consensus 319 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~-----~-~~g~~~~Ptvl-~~~~~-- 389 (441)
+|+++++++++|+|+++++++||++++.++++++++|+++ .+|+++++||+.. + ..|+|++|||+ +++++
T Consensus 318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 396 (534)
T 2y53_A 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396 (534)
T ss_dssp HHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGC
T ss_pred HHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCcccc
Confidence 9999999999999999999999999999999999999999 6899999999742 1 35899999999 78876
Q ss_pred CCccccccccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 390 ADIVKEELFAPVLYVMKFQ---TF-----EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 390 ~~i~~eE~fgPv~~v~~~~---~~-----~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+++++++
T Consensus 397 ~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 455 (534)
T 2y53_A 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLA 455 (534)
T ss_dssp SSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHH
T ss_pred CHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 6899999999999999999 99 999999999999999999999999998874
No 42
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-87 Score=697.97 Aligned_cols=419 Identities=19% Similarity=0.209 Sum_probs=378.1
Q ss_pred hHHHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCceEE-EEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHH
Q 013505 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIA-TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVR 85 (441)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~ 85 (441)
|-.-|+.+.+++...++||||+|+.+.. ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 92 (528)
T 3v4c_A 16 ENLYFQSMMIFTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLR 92 (528)
T ss_dssp -------CCSCCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccHHHHHhhhcccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 3445777888888889999999987554 99999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhh--hcCccc----cCC--CCCceeEEEEeccce
Q 013505 86 QIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ--LNGSVI----PSE--RPNHMMLETWNPLGV 157 (441)
Q Consensus 86 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~--~~~~~~----~~~--~~~~~~~~~~~P~Gv 157 (441)
++++.|++|+++|+++++.|+|||+.+++.|+..+++.+++++...+. ..+... +.. .++...+..++|+||
T Consensus 93 ~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 172 (528)
T 3v4c_A 93 AIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGP 172 (528)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSC
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcE
Confidence 999999999999999999999999999999999999999999988876 222221 111 122346788999999
Q ss_pred EEEEcCCCchHHhHH--HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcC
Q 013505 158 VGVITAFNFPCAVLG--WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKD 234 (441)
Q Consensus 158 v~~i~p~n~P~~~~~--~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~ 234 (441)
|++|+|||||+...+ +++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.++++.|+.|
T Consensus 173 v~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~ 252 (528)
T 3v4c_A 173 VAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQH 252 (528)
T ss_dssp EEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHC
T ss_pred EEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhC
Confidence 999999999999854 899999999999999999999999999999999999999999999999999 78999999999
Q ss_pred CCccEEEeeCChHHHHHHHHHhhccC--CceeecCCCCCeEEEeCCC---CHHHHHHHHHHHHHhcCCCCccCcceEEEe
Q 013505 235 PRISLVSFTGSTKVGLMVQQTVHQRF--GKCLLELSGNNAIIIMDDA---DIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309 (441)
Q Consensus 235 ~~v~~v~ftGs~~~g~~i~~~a~~~~--~~~~lelgG~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~ 309 (441)
|+|++|+||||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||
T Consensus 253 p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 332 (528)
T 3v4c_A 253 PHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVI 332 (528)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEE
T ss_pred CCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEe
Confidence 99999999999999999999999998 9999999999999999999 889999999999999999999999999999
Q ss_pred cc-cHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcC
Q 013505 310 ES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EIS 387 (441)
Q Consensus 310 ~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~ 387 (441)
++ +||+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+ +++
T Consensus 333 ~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~ 400 (528)
T 3v4c_A 333 EGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTG 400 (528)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEH
T ss_pred cccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecC
Confidence 97 9999999999999988643 67899998887777777653 479999999975 7999999999 677
Q ss_pred CC---CCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHhhh
Q 013505 388 PT---ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR--SPENIFKWL 440 (441)
Q Consensus 388 ~~---~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~--d~~~~~~~~ 440 (441)
++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++|+
T Consensus 401 ~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a 458 (528)
T 3v4c_A 401 AQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLR 458 (528)
T ss_dssp HHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHH
T ss_pred cccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHH
Confidence 76 899999999999999999999999999999999999999999 888888774
No 43
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=8.1e-85 Score=666.16 Aligned_cols=392 Identities=21% Similarity=0.277 Sum_probs=348.4
Q ss_pred CeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhh
Q 013505 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG 113 (441)
Q Consensus 34 ~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 113 (441)
..++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHHHHHHHHHHhhhhhcCc-cccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEec
Q 013505 114 I-GEVQEVIDMCDFAVGLSRQLNGS-VIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189 (441)
Q Consensus 114 ~-~ev~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkp 189 (441)
+ .|+..+++.+++++...+.+.+. ..+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 59999999999999887765432 12111 12446788899999999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCC
Q 013505 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSG 269 (441)
Q Consensus 190 s~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 269 (441)
|+.+|+++..+++ ++.++ +|+|++|+|+|+.+.++.|++ ++|++|+||||+.+|+.|++.++++++|+++||||
T Consensus 166 s~~tp~t~~~l~~----l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGG 239 (457)
T 3lns_A 166 SETTPETSAVIEK----IIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGG 239 (457)
T ss_dssp CTTCHHHHHHHHH----HHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCCChHHHHHHHH----HHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCC
Confidence 9999999998755 45555 999999999998889999998 78999999999999999999999999999999999
Q ss_pred CCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHH
Q 013505 270 NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRK 349 (441)
Q Consensus 270 ~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 349 (441)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 7766 999999999999
Q ss_pred HHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhc-CCCCcEEE
Q 013505 350 NFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS-VPQGLSSS 427 (441)
Q Consensus 350 ~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~-~~~gl~as 427 (441)
+++++++++ ++++++||... ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+ ++|||+++
T Consensus 315 rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 999999986 35999999753 36899999999 89999999999999999999999999999999999 99999999
Q ss_pred EecCCHHHHHhhh
Q 013505 428 IFTRSPENIFKWL 440 (441)
Q Consensus 428 v~t~d~~~~~~~~ 440 (441)
|||+|.+++++++
T Consensus 391 v~t~d~~~a~~~~ 403 (457)
T 3lns_A 391 VFGKDMDVAKGII 403 (457)
T ss_dssp EECSCHHHHHHHH
T ss_pred EECCCHHHHHHHH
Confidence 9999999999875
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1e-84 Score=673.48 Aligned_cols=395 Identities=19% Similarity=0.268 Sum_probs=364.8
Q ss_pred CCCeEeeecCCCCceE-EEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh
Q 013505 32 HGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL 110 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i-~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 110 (441)
++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|+++++.|+|||.
T Consensus 5 ~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 84 (510)
T 1ez0_A 5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 84 (510)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4568999999999999 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhh--hcCccc----cCCCC-C-ceeEEEEeccceEEEEcCCCchHHhH--HHHhhhhhc
Q 013505 111 PEGIGEVQEVIDMCDFAVGLSRQ--LNGSVI----PSERP-N-HMMLETWNPLGVVGVITAFNFPCAVL--GWNACIALV 180 (441)
Q Consensus 111 ~~a~~ev~~~~~~~~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~ALa 180 (441)
.+++.|+..+++.+++++...+. ..+..+ +...+ + ...+..++|+|||++|+|||||+... ++++++||+
T Consensus 85 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa 164 (510)
T 1ez0_A 85 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 164 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence 99999999999999999988775 333222 11111 1 13577899999999999999999984 499999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
+||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.++++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 244 (510)
T 1ez0_A 165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 244 (510)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999 888999999999999999999999999999999988
Q ss_pred C--CceeecCCCCCeEEEeCCCCHH--HHHHHHHHHHHhcCCCCccCcceEEEecc-cHHHHHHHHHHHHHhhccCCCCC
Q 013505 260 F--GKCLLELSGNNAIIIMDDADIK--LAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 260 ~--~~~~lelgG~~~~iV~~dadl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
+ +|+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 245 l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----- 319 (510)
T 1ez0_A 245 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----- 319 (510)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-----
T ss_pred CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-----
Confidence 6 9999999999999999999999 99999999999999999999999999999 999999999999998863
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHH-CCCEEEecCcccCCCCceEeeEEE-EcCCC---CCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPT---ADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~---~~i~~eE~fgPv~~v~~~~~ 409 (441)
||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+ +++++ |++++||+||||++|++|+|
T Consensus 320 -----gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 320 -----STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp -----BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred -----CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 688899999999999999994 7999999996 3899999999 67766 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCH--HHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSP--ENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~--~~~~~~~ 440 (441)
++|||+++|+++|||++||||+|. +++++++
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~ 423 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLI 423 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHH
Confidence 999999999999999999999997 6777764
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=2.7e-83 Score=655.51 Aligned_cols=377 Identities=21% Similarity=0.327 Sum_probs=342.7
Q ss_pred cCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHH
Q 013505 51 VEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVG 129 (441)
Q Consensus 51 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~ 129 (441)
...+.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..+++.+++++.
T Consensus 13 ~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 13 RGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp -----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3456779999999999999999999999999999999999999999999999999999999997 589999998888876
Q ss_pred hhhhhcCccccC---CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHH
Q 013505 130 LSRQLNGSVIPS---ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE 206 (441)
Q Consensus 130 ~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~ 206 (441)
....+....... .......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++ +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~----~ 168 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLA----T 168 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHH----H
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHH----H
Confidence 655432211110 112345778899999999999999999999999999999999999999999999998865 4
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHH
Q 013505 207 VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (441)
Q Consensus 207 ~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~ 286 (441)
++.++ +|+|++|+|+|+.+.+..|+.| +|++|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++
T Consensus 169 l~~~a-lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~ 246 (469)
T 3sza_A 169 IIPQY-LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACR 246 (469)
T ss_dssp HHHHH-SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHH
T ss_pred HHHHh-CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHH
Confidence 55666 9999999999977777788888 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEE
Q 013505 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (441)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~ 366 (441)
.+++++|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++||+++..+++++.++| +|++++
T Consensus 247 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~ 320 (469)
T 3sza_A 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVA 320 (469)
T ss_dssp HHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEE
Confidence 99999999999999999999999999999999999999998 699999999999999999999999998 699999
Q ss_pred ecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 367 TGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 367 ~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||... ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 321 ~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 394 (469)
T 3sza_A 321 YGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI 394 (469)
T ss_dssp ECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHH
T ss_pred eCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHH
Confidence 999863 47999999999 89999999999999999999999999999999999999999999999999998874
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=6e-80 Score=672.59 Aligned_cols=382 Identities=27% Similarity=0.424 Sum_probs=356.9
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHH
Q 013505 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129 (441)
Q Consensus 50 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~ 129 (441)
++.++.+|+++|+++|++||+.|+.+|+.+|.++|+++++.|+++.++|+++++.|+|||+.++..|+..+++.++|++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCccccC-CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHH
Q 013505 130 LSRQLNGSVIPS-ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208 (441)
Q Consensus 130 ~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l 208 (441)
..+...+..... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+ .+++
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l----~ell 699 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREA----VALL 699 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHH----HHHH
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHH----HHHH
Confidence 888765543221 12345677889999999999999999999999999999999999999999999999876 5667
Q ss_pred HhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc---CCceeecCCCCCeEEEeCCCCHHHH
Q 013505 209 ERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLA 284 (441)
Q Consensus 209 ~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~~~iV~~dadl~~a 284 (441)
.++|+|+|++|+|+| +.+ ++.|+.||+|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|
T Consensus 700 ~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~A 778 (1001)
T 3haz_A 700 HEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQV 778 (1001)
T ss_dssp HHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHH
T ss_pred HHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHH
Confidence 888999999999999 555 99999999999999999999999999998864 7999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCE
Q 013505 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364 (441)
Q Consensus 285 a~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~ 364 (441)
++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+.+++.++|++++++| +
T Consensus 779 a~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~ 857 (1001)
T 3haz_A 779 ADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-R 857 (1001)
T ss_dssp HHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-E
T ss_pred HHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-e
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999888 8
Q ss_pred EEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 365 ILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 365 v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~--~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+ +||... ..|+|++|||+.. +++++++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+++++++
T Consensus 858 v-~gg~~~-~~G~fv~PTvl~~-~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a 932 (1001)
T 3haz_A 858 L-HFAGPA-PEGCFVAPHIFEL-TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII 932 (1001)
T ss_dssp E-EEECCC-CSSSCCCCEEEEC-SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHH
T ss_pred E-eccccC-CCCcEEeeEEecC-CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHH
Confidence 8 888764 3599999999964 6788999999999999999997 7999999999999999999999999998874
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=9.6e-75 Score=592.85 Aligned_cols=370 Identities=16% Similarity=0.197 Sum_probs=328.7
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHH
Q 013505 49 TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFA 127 (441)
Q Consensus 49 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~ 127 (441)
.++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|+++++.|+||+..+++. +....++.+..+
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4566788999999999999999999999999999999999999999999999999999999988753 333444444333
Q ss_pred HHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
....+ ..+. +. ..++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++
T Consensus 85 ~~~~~-~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDMK-TIGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTCC-CSEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhccc-ccce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 22111 1111 11 123456778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCC-CCCeEEEeCCCCHHHHH
Q 013505 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNAIIIMDDADIKLAV 285 (441)
Q Consensus 208 l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~~~iV~~dadl~~aa 285 (441)
+.++|+|+|++|+|+| +.+.++.|++||+|++|+||||+.+ .+.+++++||+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 9999999999999999 8899999999999999999999984 55566788998 7888 99999999999999999
Q ss_pred HHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHH-------HhhccCCCC-CCCCccCCCCChhHHHHHHHHHHH
Q 013505 286 RSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY-------KQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 286 ~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
+.+++|+|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999885 567899988 778999999999999999999999
Q ss_pred HHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEecCCH
Q 013505 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAV----KINNSVPQGLSSSIFTRSP 433 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai----~~~n~~~~gl~asv~t~d~ 433 (441)
++.+|+++++||.. ++++++++. +|+||||++|++|+|++||| +++|+++|||+++|||+|.
T Consensus 317 a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~ 382 (464)
T 3k9d_A 317 TVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382 (464)
T ss_dssp CCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCH
Confidence 99999999999863 356778765 89999999999999999997 7999999999999999999
Q ss_pred HHHHhhh
Q 013505 434 ENIFKWL 440 (441)
Q Consensus 434 ~~~~~~~ 440 (441)
+++++|+
T Consensus 383 ~~a~~~~ 389 (464)
T 3k9d_A 383 EIIREFA 389 (464)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=6e-75 Score=592.43 Aligned_cols=357 Identities=16% Similarity=0.163 Sum_probs=292.1
Q ss_pred eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh-------CCC
Q 013505 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM-------GKI 109 (441)
Q Consensus 37 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~ 109 (441)
-++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hh----hhhHHHHHHHHHHHHHHHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCC
Q 013505 110 LP----EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183 (441)
Q Consensus 110 ~~----~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN 183 (441)
+. ++..|+..+++.+++++...++..+...+.. .++...++.++|+|||++|+||| |.... +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 97 5778999999999999987776665543321 12345678899999999999887 77766 79999999999
Q ss_pred EEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCce
Q 013505 184 CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (441)
Q Consensus 184 ~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (441)
+||+|||+.+|+++..+++++.++|.++| |+|++|+|+|+.++++.|+.||+|++|+||||+.+|+.|++.++ ++|+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 99999999999999999999999888889 99999999997778999999999999999999999999999887 8999
Q ss_pred eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCC
Q 013505 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (441)
Q Consensus 264 ~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~ 343 (441)
++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-
Confidence 99999999999999999999999999999999 999999999999999998 333
Q ss_pred ChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCC
Q 013505 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (441)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~g 423 (441)
+++++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 298 -------~~~~i~~~~~~Ga~v~~G~~~-~~~g~~~-------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~g 362 (463)
T 2h5g_A 298 -------FDQIIDMLRVEQVKIHAGPKF-ASYLTFS-------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSS 362 (463)
T ss_dssp -------HHHHHHHHHHTTCEEEECHHH-HC----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCS
T ss_pred -------HHHHHHHHHhCCCEEEeCCcc-cccCccC-------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCC
Confidence 334588888999999855432 2345553 5789999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHhhh
Q 013505 424 LSSSIFTRSPENIFKWL 440 (441)
Q Consensus 424 l~asv~t~d~~~~~~~~ 440 (441)
|+++|||+|.+++++|+
T Consensus 363 Laa~v~t~d~~~a~~~~ 379 (463)
T 2h5g_A 363 HTDVIVTEDENTAEFFL 379 (463)
T ss_dssp SEEEEECSCHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHH
Confidence 99999999999999874
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.1e-74 Score=586.32 Aligned_cols=364 Identities=18% Similarity=0.207 Sum_probs=317.8
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHH-HHH
Q 013505 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMC-DFA 127 (441)
Q Consensus 50 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~-~~~ 127 (441)
++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++. ++..+++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999875 666666666 333
Q ss_pred HHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
.. ....+. ++ ..++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~--~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 22 111111 11 112344678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHH
Q 013505 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (441)
Q Consensus 208 l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~ 286 (441)
+.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+++ .+++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 9999999999999999 889999999999999999999998654 45667899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEE
Q 013505 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (441)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~ 366 (441)
.++.|+|+|+||.|++++|||||+++||+|+++|+++ +||++++.+.++++++++++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999775 389999999999999998766677776
Q ss_pred ecCccc---CCCCceEeeEE-------E-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEecC
Q 013505 367 TGGSVI---ESEGNFVQPTI-------V-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP----QGLSSSIFTR 431 (441)
Q Consensus 367 ~gg~~~---~~~g~~~~Ptv-------l-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~----~gl~asv~t~ 431 (441)
+||... +..|+|++||+ + ++++++++.+ |+||||++|++|+|++|||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 466532 13589999997 5 5788888875 89999999999999999999999985 9999999999
Q ss_pred CHHHHHh
Q 013505 432 SPENIFK 438 (441)
Q Consensus 432 d~~~~~~ 438 (441)
|.+++++
T Consensus 376 d~~~a~~ 382 (452)
T 3my7_A 376 QDVNADR 382 (452)
T ss_dssp TTTCHHH
T ss_pred CHHHHHH
Confidence 9887766
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=3.6e-73 Score=580.08 Aligned_cols=348 Identities=17% Similarity=0.204 Sum_probs=296.5
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh-HHHHH-HHHHHHHHHHh
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI-GEVQE-VIDMCDFAVGL 130 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~~~~~~~~ 130 (441)
.+++++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||. .++. .|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8885 78888 88889988887
Q ss_pred hhhhc------CccccCC-C-CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHH
Q 013505 131 SRQLN------GSVIPSE-R-PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (441)
Q Consensus 131 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~ 202 (441)
.+.+. +...+.. . .+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 77654 3322211 1 1345678899999999999999 9 8999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 203 LVSEVFER----NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 203 li~~~l~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
++.++|.+ +|+|+|++|+|+++.++++.|+.||+|++|+||||+.+|+.|++.+ ++|+++|+|||||+||++|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~d 249 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDED 249 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTT
T ss_pred HHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCC
Confidence 99888899 9999999999994347899999999999999999999999999876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc---CCCCCCCCccCCCCChhHHHHHHHH-
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKG- 354 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~- 354 (441)
||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 250 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 250 ADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 9999999999999999999 99999999999999 9999999999999987 87633 444
Q ss_pred HHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013505 355 IENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (441)
Q Consensus 355 v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~ 434 (441)
+++++ ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 311 i~~a~----~~~~gG~-----g--~~Ptvl-v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 311 FDKLN----ELGKLTE-----A--IQCKTV-DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHH----HHTCCCH-----H--HHTTBC--------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred ccccc----eeeccCC-----C--CCCcee-eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 66665 3566774 4 688888 8889999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013505 435 NIFKWL 440 (441)
Q Consensus 435 ~~~~~~ 440 (441)
++++++
T Consensus 379 ~a~~~~ 384 (468)
T 1vlu_A 379 NAEKFM 384 (468)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.2e-70 Score=556.02 Aligned_cols=340 Identities=17% Similarity=0.219 Sum_probs=289.9
Q ss_pred HHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh--------HHHHHHHH
Q 013505 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (441)
Q Consensus 55 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (441)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+||+. .+++ .++..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999984 4555 37889999
Q ss_pred HHHHHHHhhhhhcCccccC--CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHH
Q 013505 123 MCDFAVGLSRQLNGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (441)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l 200 (441)
.+++++.+.+.. +...+. ...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999998876543 333322 113456788999999999999998 8 58889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEecC-CH-HHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 201 TKLVSEVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 201 ~~li~~~l~~aglP~gvv~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
++++.++|.++|+|+|++|+|+| +. ++++.|..||+|++|+||||+.+|+.+++.+ ++|+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 99999999999999999999998 65 5788888999999999999999999998876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc---CCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHH
Confidence 9999999999999999999 9999999999999999999999999999988 7652 13556
Q ss_pred HHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013505 356 ENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~ 435 (441)
+++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 321 ~~a~-~--------------G------~~-~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 321 EAAG-V--------------G------PL-VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHTT-C--------------C------CC-EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred Hhcc-c--------------C------cc-cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 5542 1 2 11 34678999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 013505 436 IFKWL 440 (441)
Q Consensus 436 ~~~~~ 440 (441)
+++++
T Consensus 379 a~~~a 383 (444)
T 4ghk_A 379 AMRFL 383 (444)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.1e-70 Score=554.73 Aligned_cols=339 Identities=22% Similarity=0.310 Sum_probs=299.2
Q ss_pred CHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh--------HHHHHHH
Q 013505 54 SLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVI 121 (441)
Q Consensus 54 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~ 121 (441)
..+++++++++|++||+.|+.+|+.+|.++|+++++.|++|+++|+++++.|+||+. .++. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999999999985 5553 6899999
Q ss_pred HHHHHHHHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHH
Q 013505 122 DMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199 (441)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~ 199 (441)
+.+++++...+. .+...+.. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..
T Consensus 92 ~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 92 KACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 999999987654 33332211 12344678899999999999886 46888999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEecC-C-HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeC
Q 013505 200 ITKLVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (441)
Q Consensus 200 l~~li~~~l~~aglP~gvv~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~ 277 (441)
+++++.++|.++|+|+|++|+|+| + .+.++.|..||+|++|+||||+.+|+.|++.+ .+|+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999999999999999999999998 5 46788999999999999999999999999887 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHH
Q 013505 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 278 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 99999999999999999999999999987542
Q ss_pred HHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013505 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~ 437 (441)
+.||.+. .| |+ |||. +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 298 --------~~gg~~~--~~-~~-Ptl~--~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 --------VRGCEKT--RE-IV-PDVV--PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp --------EEECHHH--HH-HS-TTSE--ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred --------eecChhh--hh-hC-Cccc--CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233321 12 33 8863 456889999999999999999999999999999999999999999999998
Q ss_pred hhh
Q 013505 438 KWL 440 (441)
Q Consensus 438 ~~~ 440 (441)
+++
T Consensus 364 ~~~ 366 (427)
T 1o20_A 364 KFV 366 (427)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=93.20 E-value=6.7 Score=38.25 Aligned_cols=163 Identities=19% Similarity=0.239 Sum_probs=94.8
Q ss_pred CCCceeEEEEeccceEEEEcCCC---chHHhHHHHhhhhhcCCCE--EEEecCCCChhhHHHHHHHHHHHHHhcCCCCce
Q 013505 143 RPNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217 (441)
Q Consensus 143 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~ALaaGN~--VVlkps~~~p~~~~~l~~li~~~l~~aglP~gv 217 (441)
.++...-.++.|+--|++..|.- ||- ++++..+||-.+|+. |+.-|++........ .-+...+|+.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~i-----L~AA~l~Gv~--- 188 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALV-----LAAAYISGVD--- 188 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHH-----HHHHHHHTCC---
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHH-----HHHHHhcCCc---
Confidence 35556667889999999999944 654 455578999999986 344554332222221 2234556664
Q ss_pred EEEec-CCHHHHHHHHc----CCCccEEEeeCChHHHHHHHHHhhccCCceeecC-CCCCeEEE--eCCCCHHHHHHHHH
Q 013505 218 FTSFC-GGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL-SGNNAIII--MDDADIKLAVRSVL 289 (441)
Q Consensus 218 v~~v~-g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~~~iV--~~dadl~~aa~~i~ 289 (441)
.+.. ||.+.-.+|.- -|+||+|+=.|+.-+...=+.-. +.+-..+ -|.+=++| ++++|.+.++..++
T Consensus 189 -eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a~p~~vAaDLl 263 (423)
T 4gic_A 189 -RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRTDPDWIAMDLF 263 (423)
T ss_dssp -EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCSCHHHHHHHHH
T ss_pred -EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCCCHHHHHHHHH
Confidence 3333 56655555554 67899999888876543322221 2333332 24444443 44689999888877
Q ss_pred HHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh
Q 013505 290 FAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326 (441)
Q Consensus 290 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~ 326 (441)
.-+=... ..+.++|..+ ++|.+++.+.+.+
T Consensus 264 sQAEHd~-----~a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 264 SQAEHDE-----DAQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp HHHTTCT-----TCEEEEEESC--HHHHHHHHHHHHH
T ss_pred HhhccCC-----CCeEEEEeCc--HHHHHHHHHHHHH
Confidence 5544332 2445667655 4455554444433
No 54
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=74.06 E-value=9.1 Score=29.30 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=31.3
Q ss_pred HCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 013505 360 SQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (441)
Q Consensus 360 ~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~ 422 (441)
+.|++++..|.. |.+++-++ .+-+.|+.|+|.+.|.++.|+-+|
T Consensus 33 ~~gGr~l~~g~~---------~~~~eG~~----------~~~~viieFpS~~aa~~~~~s~~Y 76 (99)
T 2fiu_A 33 RFGANFLARGGS---------VTELEGTA----------RARNVVIEFPSVQHAIDCYNSPEY 76 (99)
T ss_dssp HTTCEEEEESCC---------EEEEESCC----------CSEEEEEEESSHHHHHHHHHSHHH
T ss_pred HcCcEEEEECCC---------ceEEecCC----------cCeEEEEECCCHHHHHHHHcCHHH
Confidence 468899887652 33442111 237789999999999999998766
No 55
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=69.41 E-value=87 Score=30.55 Aligned_cols=160 Identities=16% Similarity=0.172 Sum_probs=91.6
Q ss_pred CceeEEEEeccceEEEEcCC---CchHHhHHHHhhhhhcCCCEEEE--ecCCCChhhHHHHHHHHHHHHHhcCCCCceEE
Q 013505 145 NHMMLETWNPLGVVGVITAF---NFPCAVLGWNACIALVCGNCVVW--KGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219 (441)
Q Consensus 145 ~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGN~VVl--kps~~~p~~~~~l~~li~~~l~~aglP~gvv~ 219 (441)
|...-.++.|+.-|++..|. -||- ++++..+||-.+|+.=|+ -|+.-.|.+. -+...+|+. .
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~i~p~iL--------~AA~l~Gv~----e 180 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEIL--------YAAQLCGVQ----D 180 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSSCCHHHH--------HHHHHTTCC----E
T ss_pred CcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCCCCHHHH--------HHHHHcCCC----E
Confidence 44555678899999999996 3554 455578899999986544 4442333321 234567775 2
Q ss_pred Ee-cCCHHHHHHHHc----CCCccEEEeeCChHHHHHHHHHhhccCCceeecCC-CCCeEEE--eCCCCHHHHHHHHHHH
Q 013505 220 SF-CGGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNAIII--MDDADIKLAVRSVLFA 291 (441)
Q Consensus 220 ~v-~g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~~~iV--~~dadl~~aa~~i~~~ 291 (441)
+. -||.+...+|.- -|+||+|+=.|+.-+...=+.-. ...+.|-..+- |.+=++| +++||.+..+..++.-
T Consensus 181 Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs-~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 181 VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVS-QRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHH-HCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhH-hhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 23 256555555543 47899999888876542211111 11233333332 5554444 4568999988887754
Q ss_pred HHhcCCCCccCcceEEEecccHHHHHHHHHHHHH
Q 013505 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYK 325 (441)
Q Consensus 292 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~ 325 (441)
+=... ..+.++|..+ ++|.+++.+.+.
T Consensus 260 AEHd~-----~a~aiLvT~s--~~la~~V~~ev~ 286 (434)
T 1kae_A 260 AEHGP-----DSQVILLTPA--ADMARRVAEAVE 286 (434)
T ss_dssp HTTCT-----TCEEEEEESC--HHHHHHHHHHHH
T ss_pred hccCC-----CCcEEEEECC--HHHHHHHHHHHH
Confidence 43332 2445666555 344444444443
No 56
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=55.35 E-value=21 Score=29.64 Aligned_cols=113 Identities=8% Similarity=0.003 Sum_probs=74.1
Q ss_pred ceEEEEcCCCc-hHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHh-cCCCCceEEEec-C-CHHHHHHH
Q 013505 156 GVVGVITAFNF-PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFC-G-GAEIGQAI 231 (441)
Q Consensus 156 Gvv~~i~p~n~-P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~-aglP~gvv~~v~-g-~~~~~~~L 231 (441)
|.|+++..-+- +-...+.+-...++.|..++--. -|+ +.|.+ .|+|-..++=++ | ++++++.+
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa--------~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I 78 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG--------NLISRATGMNVNAMLSGPMGGDQQVGALI 78 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH--------HHHHHHHCCCCEEECCGGGTHHHHHHHHH
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH--------HHHHHHhCceeEEEEecCCCCCchHHHHH
Confidence 76666655544 44444444556777888877632 233 33556 899976665444 2 34555555
Q ss_pred HcCCCccEEEeeCC-------hHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCC
Q 013505 232 AKDPRISLVSFTGS-------TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297 (441)
Q Consensus 232 ~~~~~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~G 297 (441)
.+..|+.|.||=+ ...+..|++.|..+..|+..- + ..|+.++.+.+++..
T Consensus 79 -~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~--------------l-atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 79 -SEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATN--------------V-ATADFIIQSPHFNDA 135 (152)
T ss_dssp -HTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESS--------------H-HHHHHHHTSGGGGSC
T ss_pred -HCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeC--------------H-HHHHHHHHHHhcccc
Confidence 5568999999866 457888999998888887642 2 357777777777654
No 57
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=55.28 E-value=23 Score=26.71 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=21.0
Q ss_pred ceEEEEEeCCHHHHHHHHhcCCCC
Q 013505 400 PVLYVMKFQTFEEAVKINNSVPQG 423 (441)
Q Consensus 400 Pv~~v~~~~~~~eai~~~n~~~~g 423 (441)
..+.|+.|+|.+.|.++.|+.+|.
T Consensus 53 ~~~viieFps~~aa~a~y~SpeYq 76 (94)
T 3lo3_A 53 KAQVILEFPSREDAYNWYHSEEYQ 76 (94)
T ss_dssp SEEEEEEESSHHHHHHHHHSHHHH
T ss_pred CeEEEEECCCHHHHHHHHCCHHHH
Confidence 578999999999999999987663
No 58
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=54.47 E-value=6 Score=32.27 Aligned_cols=58 Identities=17% Similarity=0.054 Sum_probs=41.4
Q ss_pred HHHh-cCCCCceEEEec-C-CHHHHHHHHcCCCccEEEeeCC-------hHHHHHHHHHhhccCCceee
Q 013505 207 VFER-NKLPGAIFTSFC-G-GAEIGQAIAKDPRISLVSFTGS-------TKVGLMVQQTVHQRFGKCLL 265 (441)
Q Consensus 207 ~l~~-aglP~gvv~~v~-g-~~~~~~~L~~~~~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~~l 265 (441)
.|.+ .|+|-..++=++ + ++++++.+. +..|+.|.||=+ ...+..|++.+-.+..|+..
T Consensus 43 ~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 43 RIEEATGLTVEKLLSGPLGGDQQMGARVA-EGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp HHHHHHCCCCEECSCGGGTHHHHHHHHHH-TTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred HHHHhhCceEEEEEecCCCCcchHHHHHH-CCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 4556 899977776666 5 455666555 568999999876 34567888888877777763
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=47.79 E-value=19 Score=29.45 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=44.2
Q ss_pred HHHHhcCCCCceEEEecCC------HHHHHHHHcCCCccEEEeeCCh-----HHHHHHHHHhhccCCceeecC
Q 013505 206 EVFERNKLPGAIFTSFCGG------AEIGQAIAKDPRISLVSFTGST-----KVGLMVQQTVHQRFGKCLLEL 267 (441)
Q Consensus 206 ~~l~~aglP~gvv~~v~g~------~~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~~a~~~~~~~~lel 267 (441)
+.|+++|+|-..++-++.+ +.+.+.+. +..|+.|.+|=+. ..+..|++.+-.+..|++..+
T Consensus 61 ~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 61 DWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 3467899997777766533 45666555 4579999997554 478889999888888887543
No 60
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=43.18 E-value=68 Score=25.39 Aligned_cols=28 Identities=21% Similarity=0.590 Sum_probs=21.3
Q ss_pred cccccceEEEEEeCCHHHHHHHHhcCCCC
Q 013505 395 EELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (441)
Q Consensus 395 eE~fgPv~~v~~~~~~~eai~~~n~~~~g 423 (441)
.|..|= +.|+.++|.|||++++...++.
T Consensus 81 kE~lgG-~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 81 KEQLGG-FYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp SSEEEE-EEEEEESSHHHHHHHHTTCGGG
T ss_pred ccccee-EEEEEeCCHHHHHHHHHhCCcc
Confidence 355443 5677999999999999887653
No 61
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=38.45 E-value=78 Score=21.60 Aligned_cols=36 Identities=6% Similarity=0.160 Sum_probs=26.8
Q ss_pred HHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 64 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
.++.....|+.+|.++|..+.......-.+...++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556789999999999998877776666555543
No 62
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=36.14 E-value=26 Score=29.84 Aligned_cols=118 Identities=8% Similarity=-0.066 Sum_probs=76.7
Q ss_pred EEecc-ceEEEEcCCCc-hHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHh-cCCCCceEEEec-C-CH
Q 013505 151 TWNPL-GVVGVITAFNF-PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFC-G-GA 225 (441)
Q Consensus 151 ~~~P~-Gvv~~i~p~n~-P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~-aglP~gvv~~v~-g-~~ 225 (441)
...|. |.|++++.-+- +-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++=++ | ++
T Consensus 22 ~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa--------~~L~e~~Gl~v~~v~k~~eGG~p 88 (178)
T 1vmd_A 22 IFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG--------ALLQEKLGLKVHRLKSGPLGGDQ 88 (178)
T ss_dssp EEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH--------HHHHHHHCCCCEECSCGGGTHHH
T ss_pred eeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH--------HHHHHHhCceeEEEeecCCCCCc
Confidence 34454 77777766554 444444455667778988875 22333 34556 899966555443 2 34
Q ss_pred HHHHHHHcCCCccEEEeeCC-------hHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCC
Q 013505 226 EIGQAIAKDPRISLVSFTGS-------TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297 (441)
Q Consensus 226 ~~~~~L~~~~~v~~v~ftGs-------~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~G 297 (441)
++++.+ .+-.|+.|.||=+ ...+..|++.|..+..|+..- + ..|+.++.+.+++..
T Consensus 89 qI~d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tn--------------l-atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 89 QIGAMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAIT--------------R-STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESS--------------H-HHHHHHHHSGGGGSC
T ss_pred hHHHHH-HCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeC--------------H-HHHHHHHHHHhcccc
Confidence 555555 5568999999866 346788999998888887642 2 457788888877754
No 63
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=34.88 E-value=71 Score=26.04 Aligned_cols=66 Identities=9% Similarity=0.149 Sum_probs=40.1
Q ss_pred CCChhHHHHHHHHHHHHH-HCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcC
Q 013505 342 LHTPESRKNFEKGIENIK-SQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420 (441)
Q Consensus 342 l~~~~~~~~~~~~v~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~ 420 (441)
+.+++..++..+.+..++ +.|++++..|.. +.+++-+.+ |. -.-+.|+.|.|.+.+.++.|+.
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~------e~-~~~~viieFPS~~aa~a~y~Sp 108 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD------EH-WDHVFIAEYPSVAAFVEMIRDP 108 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT------CC-CSEEEEEEESCHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC------CC-CCeEEEEECCCHHHHHHHHcCH
Confidence 334455554444444333 468898887653 223321111 11 1477899999999999999987
Q ss_pred CCC
Q 013505 421 PQG 423 (441)
Q Consensus 421 ~~g 423 (441)
+|.
T Consensus 109 eYq 111 (143)
T 3hhl_A 109 VYR 111 (143)
T ss_dssp HHH
T ss_pred HHH
Confidence 663
No 64
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=32.78 E-value=58 Score=25.70 Aligned_cols=82 Identities=13% Similarity=0.124 Sum_probs=50.9
Q ss_pred HHHHHHHHHhcCCCCccC--cceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc-------cCCCCChhHHHHHHHHH
Q 013505 285 VRSVLFAAVGTAGQRCTT--CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL-------LGPLHTPESRKNFEKGI 355 (441)
Q Consensus 285 a~~i~~~~~~~~Gq~C~a--~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~-------~gpl~~~~~~~~~~~~v 355 (441)
+...+.......+-.|.. ..+.|++.+.++++.+.+.+.++.+.--+|+..+.. ..|-.+.. -+..++
T Consensus 34 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~---~~~~ll 110 (135)
T 2v9v_A 34 TRKLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPAR---VYQALL 110 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHH---HHHHHH
T ss_pred HHHHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHH---HHHHHH
Confidence 334444444444444444 244589999999999999999998766666665432 22322333 345667
Q ss_pred HHHHHCCCEEEecC
Q 013505 356 ENIKSQGGKILTGG 369 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg 369 (441)
+...++|.-...|+
T Consensus 111 ~~l~~~g~l~~~~~ 124 (135)
T 2v9v_A 111 EEWSREGRLQLAAN 124 (135)
T ss_dssp HHHHHTTSEEECSS
T ss_pred HHHHHCCCEEecCC
Confidence 77788886665544
No 65
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.08 E-value=1.1e+02 Score=22.18 Aligned_cols=36 Identities=6% Similarity=0.085 Sum_probs=26.8
Q ss_pred HHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 64 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
.++.....|+.++.++|..+.......-+.+..++.
T Consensus 48 isk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 48 FSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555779999999999998888776666655543
No 66
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.32 E-value=1.7e+02 Score=21.88 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=27.5
Q ss_pred HHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 65 CSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
++.....|+.++.++|..+.......-+.+..++...
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y 85 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAY 85 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344467999999999999888877777666655544
No 67
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=27.68 E-value=92 Score=21.80 Aligned_cols=30 Identities=7% Similarity=0.077 Sum_probs=22.0
Q ss_pred HHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 66 SEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 66 ~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
+.....|+.+|.++|..+.......-+.+.
T Consensus 37 k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~ 66 (76)
T 1hry_A 37 KQLGYQWKMLTEAEKWPFFQEAQKLQAMHR 66 (76)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 444567999999999998777766555543
No 68
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=26.36 E-value=1.4e+02 Score=22.50 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=30.0
Q ss_pred HHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 64 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
.++.....|+.++..++..+.......-+.+..++...
T Consensus 37 isK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y 74 (101)
T 1v63_A 37 RMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLW 74 (101)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556678999999999999888887777777766654
No 69
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=25.64 E-value=1.1e+02 Score=22.44 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=25.8
Q ss_pred HHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 65 CSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++.....|+.++.++|..+.......-+.+..++.
T Consensus 39 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~ 73 (92)
T 2crj_A 39 TKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELW 73 (92)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445679999999999998888776666655544
No 70
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=25.61 E-value=33 Score=30.48 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=40.8
Q ss_pred HHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChH
Q 013505 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTK 247 (441)
Q Consensus 172 ~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~ 247 (441)
+..++..+.+||-||++.++..-... +..+|..- +|.|.+++++.+.+- ...-.-+.+.+..+..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~~~~~s------~~~~L~~l-LP~~c~~l~~~s~~Y----~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDVDLVQS------AFEVLRTM-LPVGCVRIIPYSSQY----EEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCHHHHHH------HHHHHGGG-SCGGGCCEEEEESSC----CCTTTCSEEEECTTCC
T ss_pred HHHHHHHHhcCCEEEEEcCCHHHHHH------HHHHHHHh-CCHHHHhccccchhh----cchhheeeecCCCCcc
Confidence 45677889999999999976443222 23445444 999999998643221 1123456666666544
No 71
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=25.42 E-value=49 Score=26.52 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=29.9
Q ss_pred ceEEEecCC-HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCC
Q 013505 216 AIFTSFCGG-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (441)
Q Consensus 216 gvv~~v~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (441)
|.+++++|+ .+.-...+..+++.+|.+||+...-..+.+.+.+...
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~i 99 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGV 99 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCC
Confidence 568888784 3333333332579999999998777777766654433
No 72
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=24.45 E-value=1.1e+02 Score=21.69 Aligned_cols=31 Identities=6% Similarity=0.138 Sum_probs=22.6
Q ss_pred HHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 65 CSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
++.....|+.+|.++|..+.......-+.+.
T Consensus 34 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~ 64 (80)
T 1gt0_D 34 SKRLGAEWKLLSETEKRPFIDEAKRLRALHM 64 (80)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 3444567999999999998877766555543
No 73
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=22.45 E-value=3.9e+02 Score=23.30 Aligned_cols=93 Identities=12% Similarity=-0.036 Sum_probs=48.2
Q ss_pred ceEEEEcCCCchHHhHHHHhh--h-hhcCCCEE-EEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-----CHH
Q 013505 156 GVVGVITAFNFPCAVLGWNAC--I-ALVCGNCV-VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-----GAE 226 (441)
Q Consensus 156 Gvv~~i~p~n~P~~~~~~~i~--~-ALaaGN~V-Vlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-----~~~ 226 (441)
|+-..+.|-.+-...++..+. . -...|..| ++++....+. |.+.|.+.|..-..+.+... ..+
T Consensus 104 G~~~~~~~~~~~~e~L~~~l~~~~~~~~~~~~vL~~rg~~~r~~--------L~~~L~~~G~~v~~~~vY~~~~~~~~~~ 175 (254)
T 4es6_A 104 GLDVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREF--------LAERLRGQGVQVDYLPLYRRRAPDYPAG 175 (254)
T ss_dssp TCCEECCSSCCSHHHHHTCHHHHHHTCSSSCEEEEEECSSCCCH--------HHHHHHHTTCEEEEEECEEEECCCCCTT
T ss_pred CCCcccCCCCCCHHHHHHhHhhcccccCCCCEEEEEcCCccHHH--------HHHHHHHCCCEEEEEeEEEeeCCCCCHH
Confidence 554555554443333433332 1 12345444 4555443332 35667888887554444321 122
Q ss_pred HHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 227 IGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 227 ~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
....++....++.|.|| |..+.+.+.+...
T Consensus 176 ~~~~~l~~~~~d~v~ft-S~s~v~~~~~~~~ 205 (254)
T 4es6_A 176 ELLARVRAERLNGLVVS-SGQGLQNLYQLAA 205 (254)
T ss_dssp HHHHHHHHTTCCEEECC-SHHHHHHHHHHHG
T ss_pred HHHHHHHhCCCCEEEEc-CHHHHHHHHHHhh
Confidence 22233344579999997 6666777766654
No 74
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=22.10 E-value=1e+02 Score=21.70 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=22.4
Q ss_pred HHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 65 CSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
++.....|..++.++|..+.......-+.+.
T Consensus 34 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~ 64 (79)
T 3u2b_C 34 SKRLGKRWKLLKDSDKIPFIQEAERLRLKHM 64 (79)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 3344567999999999998877766555543
No 75
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=21.08 E-value=4.9e+02 Score=24.14 Aligned_cols=170 Identities=13% Similarity=0.075 Sum_probs=87.6
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCc--eEEEecC--CHHHHHHHHcCCCccEEEeeCChHHHHH-----
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA--IFTSFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLM----- 251 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~g--vv~~v~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~----- 251 (441)
.|...|+-|--.++.-...+.+++.++-.+.|++.. ++-.+.. +-.....+..+|+++.+.| |..+-...
T Consensus 110 ~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~-G~~DL~~~lg~~~ 188 (332)
T 3qqw_A 110 GRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDF-GLMDFVSGHHGAI 188 (332)
T ss_dssp TCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEE-CHHHHHHTTTTCS
T ss_pred cCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEE-cHHHHHHHhCCCc
Confidence 366667778777777666666666665556787654 2333332 3344556778899998886 32221111
Q ss_pred ----------------------HHHHhhccCCceeecCCCCCeEE--EeCC-CCHHHHHHHHHHHH--HhcCCCCccCcc
Q 013505 252 ----------------------VQQTVHQRFGKCLLELSGNNAII--IMDD-ADIKLAVRSVLFAA--VGTAGQRCTTCR 304 (441)
Q Consensus 252 ----------------------i~~~a~~~~~~~~lelgG~~~~i--V~~d-adl~~aa~~i~~~~--~~~~Gq~C~a~~ 304 (441)
+...+... |+.+ | |+.| .|.+...+.+..++ +...|..|+.|+
T Consensus 189 ~~~~~~~~g~~~~p~l~~ar~~vv~AAraa---------Gi~~-id~v~~d~~D~~gl~~~~~~~~~~lGf~Gk~~IHP~ 258 (332)
T 3qqw_A 189 PAAAMRSPGQFEHALLVRAKADMVAAALAN---------GIVP-AHNVCLNLKDAEVIASDACRARNEFGFLRMWSIYPA 258 (332)
T ss_dssp CGGGGSTTGGGTSHHHHHHHHHHHHHHHHT---------TCEE-EECCCSCSSCHHHHHHHHHHHHHHHCCCEEEESSGG
T ss_pred cccccCCCCcccCHHHHHHHHHHHHHHHHh---------CCCc-ccCCcccccCHHHHHHHHHHHHHhCCCCcccccCHH
Confidence 11112222 3322 1 2222 36776666777774 789999999998
Q ss_pred eEEEecccH----HHHH--HHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEE
Q 013505 305 RLLIHESIY----QTVL--DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365 (441)
Q Consensus 305 ~v~V~~~i~----~~f~--~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v 365 (441)
.|-+-..++ ++.- .++.+..+.-..|- -+.=|-|++..+..+.++.++.|..-|..+
T Consensus 259 QI~~in~~f~Ps~~ei~~A~~il~a~~~~g~G~----~~~dG~MvD~p~~~~A~~il~~a~~~g~~~ 321 (332)
T 3qqw_A 259 QIQPIVNAMRPDFTEVEDAAGILVAAQDADWGP----IQYKGELHDRATYRYFWEVLQKAKVTGMAV 321 (332)
T ss_dssp GHHHHHHHHSCCHHHHHHHHCC--------------------------CHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHhcCCcc----EeECCEeccHHHHHHHHHHHHHHHHhCCCC
Confidence 876655444 1211 11111111100010 012367889999999999999998877443
No 76
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=20.87 E-value=1.8e+02 Score=20.88 Aligned_cols=30 Identities=7% Similarity=0.077 Sum_probs=21.6
Q ss_pred HHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 66 SEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 66 ~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
+.....|+.+|.++|..+.......-+.+.
T Consensus 37 k~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~ 66 (85)
T 1j46_A 37 KQLGYQWKMLTEAEKWPFFQEAQKLQAMHR 66 (85)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 344567999999999988777666555543
No 77
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=20.84 E-value=4.7e+02 Score=23.67 Aligned_cols=178 Identities=13% Similarity=0.075 Sum_probs=89.5
Q ss_pred EEEEcCCCchHHhHHHHhhhhhc-------CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC--CHH--
Q 013505 158 VGVITAFNFPCAVLGWNACIALV-------CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG--GAE-- 226 (441)
Q Consensus 158 v~~i~p~n~P~~~~~~~i~~ALa-------aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g--~~~-- 226 (441)
+..+.+-|+-....+..-+.... .++.+++-.....+.+..+.. =+.+.+.+.|. .....++.+ +.+
T Consensus 115 ~~~V~~D~~~~g~~a~~~L~~~g~~~~~g~~~~i~~i~g~~~~~~~~~R~~-Gf~~~l~~~~~-~~~~~~~~~~~~~~~~ 192 (350)
T 3h75_A 115 IGSMVGDDEEAGYRMLKELLHKLGPVPAGHGIELLAFSGLKVTPAAQLRER-GLRRALAEHPQ-VHLRQLVYGEWNRERA 192 (350)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHCCCCSSCCEEEEEEESCTTSHHHHHHHH-HHHHHHHHCTT-EEEEEEEECTTCHHHH
T ss_pred eeeecCChHHHHHHHHHHHHHHhhhhcCCCCceEEEEeCCCCCHHHHHHHH-HHHHHHHHCCC-eEEEEEeeCCCcHHHH
Confidence 55666677655544433333333 256667766666666555543 35788899887 334445554 333
Q ss_pred ---HHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCc
Q 013505 227 ---IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTC 303 (441)
Q Consensus 227 ---~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 303 (441)
..+.|..+|++++| |+.+...+..+.+.+.+.+.++ +.+..|+.=|. ...+.+.+.. |. .
T Consensus 193 ~~~~~~~L~~~~~~~aI-~~~~d~~a~g~~~al~~~G~~v-----P~di~vvg~d~-~~~~l~~~~~------~~----l 255 (350)
T 3h75_A 193 YRQAQQLLKRYPKTQLV-WSANDEMALGAMQAARELGRKP-----GTDLLFSGVNS-SPEALQALID------GK----L 255 (350)
T ss_dssp HHHHHHHHHHCTTEEEE-EESSHHHHHHHHHHHHHTTCCB-----TTTBEEEEESC-CHHHHHHHHH------TS----S
T ss_pred HHHHHHHHHhCCCcCEE-EECChHHHHHHHHHHHHcCCCC-----CCCeEEEecCC-CHHHHHHHHc------CC----e
Confidence 33466678999887 4566666666665555433321 23345554443 3334444432 21 1
Q ss_pred ceEEE-ecccHHHHHHHHHHHHHhhccCCCCCC-CCccCC-CCChhHHHHHHHH
Q 013505 304 RRLLI-HESIYQTVLDQLVDVYKQVKIGDPLEK-GTLLGP-LHTPESRKNFEKG 354 (441)
Q Consensus 304 ~~v~V-~~~i~~~f~~~l~~~~~~~~~g~p~~~-~~~~gp-l~~~~~~~~~~~~ 354 (441)
..+.. +..+...-++.|.+.+..-.+..+..+ ...+.+ +++++..+.+.+.
T Consensus 256 ttv~~~~~~~G~~av~~l~~~l~g~~~~~~~~~~~~~~~~~lvt~~nv~~~~~~ 309 (350)
T 3h75_A 256 SVLEAGHFTLGGWALVALHDDALGLDARRLGGPDWQLSLFQALTPAQARQLLRL 309 (350)
T ss_dssp CEEEECGGGHHHHHHHHHHHHHTTCCSTTTTCSEEECCCCEECCHHHHHHHHHH
T ss_pred eEEEcCchhhHHHHHHHHHHHHcCCCccccCCCceEeccceeeCHHHHHHHHHH
Confidence 22222 233334445555555543322211111 222333 6777666555433
Done!