Your job contains 1 sequence.
>013506
MESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYG
PPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV
FIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR
RSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA
TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKK
KLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAEL
YSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTE
MDGLEQAKVIIYPISFIFQLS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013506
(441 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 1525 1.8e-156 1
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 854 2.4e-85 1
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 851 4.9e-85 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 850 6.2e-85 1
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 847 1.3e-84 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 841 5.6e-84 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 839 9.1e-84 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 839 9.1e-84 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 839 9.1e-84 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 839 9.1e-84 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 839 9.1e-84 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 839 9.1e-84 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 839 9.1e-84 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 839 9.1e-84 1
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 839 9.1e-84 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 839 9.1e-84 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 837 1.5e-83 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 836 1.9e-83 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 827 1.7e-82 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 826 2.2e-82 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 815 3.2e-81 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 815 3.2e-81 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 814 4.1e-81 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 808 1.8e-80 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 807 2.2e-80 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 805 3.7e-80 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 803 6.0e-80 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 802 7.6e-80 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 802 7.6e-80 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 802 7.6e-80 1
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 794 5.4e-79 1
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 793 6.8e-79 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 792 8.7e-79 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 792 8.7e-79 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 791 1.1e-78 1
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 791 1.1e-78 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 789 1.8e-78 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 789 1.8e-78 1
UNIPROTKB|F6UUI0 - symbol:SPATA5L1 "Uncharacterized prote... 785 4.8e-78 1
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc... 783 7.9e-78 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 780 1.6e-77 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 780 1.6e-77 1
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 779 2.1e-77 1
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 777 3.4e-77 1
UNIPROTKB|E2QSC5 - symbol:SPATA5L1 "Uncharacterized prote... 776 4.3e-77 1
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 769 2.4e-76 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 764 8.1e-76 1
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 756 5.7e-75 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 743 1.4e-73 1
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 741 2.2e-73 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 454 1.2e-71 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 454 1.2e-71 2
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 388 1.7e-70 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 386 3.0e-70 2
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 704 1.8e-69 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 685 1.9e-67 1
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 415 4.8e-66 3
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 403 5.3e-66 2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 403 4.7e-65 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 403 4.7e-65 2
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 401 7.4e-65 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 403 2.9e-64 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 398 2.9e-64 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 387 1.4e-63 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 400 1.6e-63 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 399 1.6e-63 2
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 410 1.9e-63 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 392 3.0e-63 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 407 3.2e-63 2
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 404 3.3e-63 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 410 4.4e-63 2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 411 9.4e-61 2
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 376 3.0e-60 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 373 7.1e-59 2
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 586 5.9e-57 1
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 410 5.6e-55 2
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 288 3.0e-47 3
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 325 1.5e-43 2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 325 1.5e-43 2
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 453 3.7e-43 2
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 451 1.2e-42 1
UNIPROTKB|P96281 - symbol:Rv0435c "Transitional endoplasm... 402 1.3e-42 2
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 456 3.7e-42 1
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 454 6.2e-42 1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 454 6.2e-42 1
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 452 1.0e-41 1
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 451 1.3e-41 1
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 449 2.2e-41 1
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 421 3.0e-38 1
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 379 5.9e-38 2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 412 5.9e-38 1
UNIPROTKB|E2RRW1 - symbol:ATAD2 "Uncharacterized protein"... 407 1.3e-37 2
DICTYBASE|DDB_G0272777 - symbol:DDB_G0272777 "AAA ATPase ... 330 1.5e-37 3
UNIPROTKB|F1RR16 - symbol:ATAD2 "Uncharacterized protein"... 405 2.1e-37 2
UNIPROTKB|Q6PL18 - symbol:ATAD2 "ATPase family AAA domain... 404 2.7e-37 2
ZFIN|ZDB-GENE-110411-210 - symbol:atad2b "ATPase family, ... 397 2.9e-37 2
ZFIN|ZDB-GENE-030131-5754 - symbol:wu:fi16e04 "wu:fi16e04... 398 3.3e-37 2
MGI|MGI:1917722 - symbol:Atad2 "ATPase family, AAA domain... 407 8.0e-37 1
UNIPROTKB|F1NN52 - symbol:F1NN52 "Uncharacterized protein... 396 1.1e-36 2
UNIPROTKB|F1MEU3 - symbol:ATAD2B "Uncharacterized protein... 392 1.1e-36 2
WARNING: Descriptions of 601 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
Identities = 305/421 (72%), Positives = 341/421 (80%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
NEKW+AE IGGN A++ALRELI FP Y +A+ LGLKWPRGLLLYGPPGTGKTSLVR
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AVV+EC AHL V+SPHSVH+AH GESEK LREAF++ASSHA+S KPSV+FIDEID LCPR
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 132 RDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
RD RREQDVRIASQLFTLMDSNKPS +S P VVVVASTNRVDAIDPALRR+GRFD
Sbjct: 135 RDARREQDVRIASQLFTLMDSNKPS-SSAPRVVVVASTNRVDAIDPALRRAGRFDALVEV 193
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R +IL+LYTKKV LD +VDL+AIA SCNGYVGADLEALCREAT+SA KRSSD+
Sbjct: 194 STPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDS 253
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
L +T +D++ A+SVVGPSI RG+TVEIPKVTW+D+GGL+DLKKKLQQAVEWPIK
Sbjct: 254 ------LILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIK 307
Query: 312 HSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEAL 371
HS AF ++GISP+RG LLHGPPGC AEL+SMYVGE EAL
Sbjct: 308 HSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEAL 367
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGG-SSSTSITVGERLLSTLLTEMDGLEQAKVI 430
LRNTFQRARLA+PSIIFFDEADVV KRG SSS S TVGERLLSTLLTEMDGLE+AK I
Sbjct: 368 LRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGI 427
Query: 431 I 431
+
Sbjct: 428 L 428
Score = 327 (120.2 bits), Expect = 7.8e-29, P = 7.8e-29
Identities = 80/258 (31%), Positives = 133/258 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + + L++ + +P+ +S+ K+G+ RG+LL+GPPG KT+L +A A
Sbjct: 288 VGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQAS 347
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL-CPRRDHRREQD 139
+S + +VGE E LR F +A PS++F DE D + C R D
Sbjct: 348 FFSLSCAELFSMYVGEGEALLRNTFQRARL----ASPSIIFFDEADVVACKRGDESSSNS 403
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
+ +L + + + ++V+A+TNR AID AL R GRFD R
Sbjct: 404 STVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEAR 463
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
FEIL+++T+ + L +VDL IA + + GA+LE LCRE+ +++ + A +
Sbjct: 464 FEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAAT------A 517
Query: 260 VTMEDWRHARSVVGPSIT 277
V ++ A+S + P++T
Sbjct: 518 VFNRHFQTAKSSLKPALT 535
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 184/429 (42%), Positives = 263/429 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRGLLLYGPPGTGKT
Sbjct: 343 EQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQSEVEKRVVASLLTLMDGIG-SEGSEGRVLVLGATNRPQALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L +L +A + +GYVGADL+ALC EA + A+
Sbjct: 517 KEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R N + AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 577 RRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +FSR+GI P +G LL+GPPGC G E
Sbjct: 637 LKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R F++AR APSIIFFDE D + +RG SS V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAK 428
EMDG+EQ K
Sbjct: 756 EMDGIEQLK 764
Score = 242 (90.2 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 61/160 (38%), Positives = 94/160 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L++ + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 629 IGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 688
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ- 138
L + P ++K +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 689 FLAIKGPELMNK-YVGESERAVREVFRKARAVA----PSIIFFDELDALAVERGSSSGAG 743
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAID 176
+V R+ +QL T MD + K +V V+A+TNR D ID
Sbjct: 744 NVADRVLAQLLTEMDGIEQLK----NVTVLAATNRPDRID 779
Score = 39 (18.8 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSI 276
A+C+EA + A++ + A +C + + A S+V P I
Sbjct: 783 AVCKEAALLALEENIKA-DC-----IMKRHFTQALSIVTPRI 818
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 183/429 (42%), Positives = 263/429 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRGLLLYGPPGTGKT
Sbjct: 343 EQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQSEVEKRVVASLLTLMDGIG-SEGSEGRVLVLGATNRPQALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L +L +A + +GYVGADL+ALC EA + A+
Sbjct: 517 KEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R N + AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 577 RRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +F+R+GI P +G LL+GPPGC G E
Sbjct: 637 LKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R F++AR APSIIFFDE D + +RG SS V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAK 428
EMDG+EQ K
Sbjct: 756 EMDGIEQLK 764
Score = 349 (127.9 bits), Expect = 9.6e-31, P = 9.6e-31
Identities = 91/260 (35%), Positives = 141/260 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L++ + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 629 IGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 688
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ- 138
L + P ++K +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 689 FLAIKGPELMNK-YVGESERAVREIFRKARAVA----PSIIFFDELDALAVERGSSSGAG 743
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+V R+ +QL T MD + K +V V+A+TNR D ID AL R GR D
Sbjct: 744 NVADRVLAQLLTEMDGIEQLK----NVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
R EIL L +P+ VDL+ + + Y GA++ A+C+EA + A++ + A +C
Sbjct: 800 ATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKA-DC-- 856
Query: 257 VLSVTMEDWRHARSVVGPSI 276
+ + A S+V P I
Sbjct: 857 ---IMKRHFTQALSIVTPRI 873
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 182/429 (42%), Positives = 262/429 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRG+LLYGPPGTGKT
Sbjct: 343 EQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEAKLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQNEVEKRVVASLLTLMDGIG-SEVSEGQVLVLGATNRPHALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L +L +A S +GYVGADL+ LC EA + A+
Sbjct: 517 KEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R N + AG++ +T++D+ A + + PS R + +++P V+W DIGGL +K
Sbjct: 577 RRILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +F R+GI P +G LL+GPPGC G E
Sbjct: 637 LKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R TF++AR APSIIFFDE D + +RG S V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAK 428
EMDG+EQ K
Sbjct: 756 EMDGIEQLK 764
Score = 349 (127.9 bits), Expect = 9.6e-31, P = 9.6e-31
Identities = 86/236 (36%), Positives = 130/236 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L + + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 629 IGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 688
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ- 138
L + P ++K +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 689 FLAIKGPELMNK-YVGESERAVRETFRKARAVA----PSIIFFDELDALAVERGSSLGAG 743
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+V R+ +QL T MD + K V ++A+TNR D ID AL R GR D
Sbjct: 744 NVADRVLAQLLTEMDGIEQLKD----VTILAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDAN 252
R EI KL +P+ VDL+ + + Y GA++ A+CREA + A++ AN
Sbjct: 800 ATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQAN 855
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 183/429 (42%), Positives = 264/429 (61%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRG+LLYGPPGTGKT
Sbjct: 343 EEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ RAV E GA+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DA
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDA 457
Query: 128 LCPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 458 LCPKREGAQNEVEKRVVASLLTLMDGIG-SEGSEGQVLVLGATNRPHALDAALRRPGRFD 516
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ ++VP L V+L +A S +GYVGADL+ALC EA + A+
Sbjct: 517 KEIEIGVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYAL 576
Query: 246 KR--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+R + N + AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 577 RRVLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 636
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
KL+QAVEWP+KH +F R+GI P +G LL+GPPGC G E
Sbjct: 637 LKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 696
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L + YVGESE +R F++AR +PSIIFFDE D + +RG SS V +R+L+ LLT
Sbjct: 697 LMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAG-NVADRVLAQLLT 755
Query: 420 EMDGLEQAK 428
EMDG+EQ K
Sbjct: 756 EMDGIEQLK 764
Score = 353 (129.3 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 93/264 (35%), Positives = 144/264 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L++ + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 629 IGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 688
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ- 138
L + P ++K +VGESE+A+RE F +A A+S PS++F DE+DAL R
Sbjct: 689 FLAIKGPELMNK-YVGESERAVREIFRKA--RAVS--PSIIFFDELDALAIERGSSSGAG 743
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+V R+ +QL T MD + K V ++A+TNR D ID AL R GR D
Sbjct: 744 NVADRVLAQLLTEMDGIEQLKD----VTILAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
R EIL L +P+ +V+L+ + + Y GA++ A+CREA + A++ AN
Sbjct: 800 ATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQAN---- 855
Query: 257 VLSVTMEDWRHARSVVGPSITRGV 280
S+T + A S V P I++ +
Sbjct: 856 --SITRRHFTRALSTVTPRISKSL 877
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 85/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S + NE
Sbjct: 648 PDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NE 706
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 222 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 281
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 282 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 337
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 338 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 393
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 394 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 453
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 454 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 513
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 514 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 573
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 574 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 631
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 493 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 552
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 553 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 608
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 609 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 663
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 664 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 721
Score = 250 (93.1 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 216 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 275
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 276 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 332
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 333 HGEVERRIVSQLLTLMDGLKQRAHVIV 359
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 84/238 (35%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKK 615
Score = 331 (121.6 bits), Expect = 6.6e-29, P = 6.6e-29
Identities = 84/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSIKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK +K P+ +VD++ +A NG+ GADL +C+ A A++ S + NE
Sbjct: 648 PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NE 706
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 176/418 (42%), Positives = 251/418 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 327 (120.2 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 84/240 (35%), Positives = 122/240 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLD--ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 707
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 179/419 (42%), Positives = 258/419 (61%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG + ++ +RE+I PL + G+ PRG+LLYGPPGTGKT + RAV E G
Sbjct: 347 DMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVG 406
Query: 79 AHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
A+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DALCP+R+ +
Sbjct: 407 AYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDALCPKREGAQN 461
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 462 EVEKRVVASLLTLMDGIG-SEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 520
Query: 197 XXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAVKR--SSDAN- 252
R +IL+ ++VP L +L +A S +GYVGADL+ALC EA + A++R N
Sbjct: 521 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNL 580
Query: 253 ---ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWP 309
+ AG++ +T++D+ + + PS R V +++P V+W DIGGL ++K KL+QAVEWP
Sbjct: 581 PDSKVAGLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWP 640
Query: 310 IKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESE 369
+KH +F+++GI P +G LL+GPPGC G EL + YVGESE
Sbjct: 641 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 700
Query: 370 ALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F++AR APSIIFFDE D + +RG SS V +R+L+ LLTEMDG+EQ K
Sbjct: 701 RAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLTEMDGIEQLK 758
Score = 245 (91.3 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 55/139 (39%), Positives = 76/139 (54%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++ IGGL K++++ +E P+K F GISP RG LL+GPPG
Sbjct: 343 KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVA 402
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S + GE+EA LR F A L PSIIF DE D + KR G+ +
Sbjct: 403 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 462
Query: 406 SITVGERLLSTLLTEMDGL 424
V +R++++LLT MDG+
Sbjct: 463 ---VEKRVVASLLTLMDGI 478
Score = 241 (89.9 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 62/165 (37%), Positives = 95/165 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L++ + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 623 IGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 682
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ- 138
L + P ++K +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 683 FLAIKGPELMNK-YVGESERAVREIFRKARAVA----PSIIFFDELDALAVERGSSSGAG 737
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+V R+ +QL T MD + K V ++A+TNR D ID L R
Sbjct: 738 NVADRVLAQLLTEMDGIEQLKD----VTILAATNRPDRIDKELLR 778
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 179/419 (42%), Positives = 259/419 (61%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG + ++ +RE+I PL + G+ PRG+LLYGPPGTGKT + RAV E G
Sbjct: 344 DMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVG 403
Query: 79 AHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
A+++VI+ P + K + GE+E LR+ F++A+ PS++FIDE+DALCP+R+ +
Sbjct: 404 AYVSVINGPEIISKFY-GETEARLRQIFAEATLR----HPSIIFIDELDALCPKREGAQN 458
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 459 EVEKRVVASLLTLMDGIG-SEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 517
Query: 197 XXRFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAVKR------SS 249
R +IL+ ++VP L +L +A S +GYVGADL+ALC EA + A++R +
Sbjct: 518 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNL 577
Query: 250 DANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWP 309
++ AG++ +T++D+ + + PS R V V++P V+W DIGGL ++K KL+QAVEWP
Sbjct: 578 PDSKMAGLVKITLKDFLQGMNDIRPSAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWP 637
Query: 310 IKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESE 369
+KH +F+++GI P +G LL+GPPGC G EL + YVGESE
Sbjct: 638 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 697
Query: 370 ALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F++AR APSIIFFDE D + +RG SS V +R+L+ LLTEMDG+EQ K
Sbjct: 698 RAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG-NVADRVLAQLLTEMDGIEQLK 755
Score = 240 (89.5 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 54/139 (38%), Positives = 75/139 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++ IGGL K++++ +E P+K F GI P RG LL+GPPG
Sbjct: 340 KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA 399
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S + GE+EA LR F A L PSIIF DE D + KR G+ +
Sbjct: 400 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNE 459
Query: 406 SITVGERLLSTLLTEMDGL 424
V +R++++LLT MDG+
Sbjct: 460 ---VEKRVVASLLTLMDGI 475
Score = 239 (89.2 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 60/160 (37%), Positives = 94/160 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L++ + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 620 IGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 679
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ- 138
L + P ++K +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 680 FLAIKGPELMNK-YVGESERAVREIFRKARAVA----PSIIFFDELDALAVERGSSSGAG 734
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAID 176
+V R+ +QL T MD + K +V ++A+TNR D ID
Sbjct: 735 NVADRVLAQLLTEMDGIEQLK----NVTILAATNRPDRID 770
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 176/418 (42%), Positives = 250/418 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Score = 334 (122.6 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++L+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDLE +A NG+ GADL +C+ A A++ S ++
Sbjct: 648 PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/147 (38%), Positives = 78/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 175/418 (41%), Positives = 250/418 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 321
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 322 RRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTM+D+R A S PS R VE+P +TWEDIGGL D+K++LQ+ V++P+
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPV 497
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKK 615
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 85/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNVGD 592
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 593 GGGAAD-RVINQILTEMDGMSSKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S + NE
Sbjct: 648 PDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE-NE 706
Score = 252 (93.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 57/147 (38%), Positives = 79/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG+R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 173/418 (41%), Positives = 248/418 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + S + +G+K PRG+L+YGPPGTGKT + RAV E GA
Sbjct: 203 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAF 262
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A ++ P+++FIDEIDA+ P+RD E +
Sbjct: 263 FFLINGPEIMSKLAGESESNLRKAFEEAEKNS----PAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S H++V+A+TNR ++IDPALRR GRFD R
Sbjct: 319 RRIVSQLLTLMDGMKKSS----HLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGR 374
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
E+L+++TK + L +VDLE IA +G+VGADL +LC EA + ++ D
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKI 434
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R+A + PS R VE+P TW DIGGL +KK+LQ+ V++P+
Sbjct: 435 DAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPV 494
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 495 EHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 554
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP ++FFDE D + RGG+ + +R+++ +LTEMDG+ K
Sbjct: 555 NVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKK 612
Score = 331 (121.6 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 83/236 (35%), Positives = 123/236 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + L+EL+ +P+ + + K G++ RG+L YGPPG GKT L +A+ EC A+
Sbjct: 476 IGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN 535
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----DHR 135
+ + GESE +R+ F +A S A P V+F DE+D++ R D
Sbjct: 536 FISVKGPELLTMWFGESEANVRDIFDKARSAA----PCVLFFDELDSIAKARGGNVGDAG 591
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 592 GAAD-RVINQILTEMDGMGAKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 646
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K PL VDL IA G+ GADL +C+ A A++++ +A
Sbjct: 647 DKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEA 702
Score = 238 (88.8 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 51/145 (35%), Positives = 77/145 (53%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++DIGG R ++++ VE P++H + F +G+ P RG L++GPPG
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ A +P+IIF DE D + KR T
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR---DKTH 314
Query: 407 ITVGERLLSTLLTEMDGLEQAKVII 431
V R++S LLT MDG++++ +I
Sbjct: 315 GEVERRIVSQLLTLMDGMKKSSHLI 339
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 173/418 (41%), Positives = 247/418 (59%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + +REL+ PL + + +G+K P+G+LLYGPPG GKT + RAV E GA
Sbjct: 204 IGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAF 263
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ + E +
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTQGEVE 319
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 320 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGR 375
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC----- 254
EI++++TK + LD VDLEA+A +GYVGADL ALC E+ + ++ D +
Sbjct: 376 LEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETI 435
Query: 255 -AGVL---SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
A +L SVT + +R A ++ PS R VE+P TWEDIGGL +K++L++ V++P+
Sbjct: 436 SAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPV 495
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+ P +G L +GPPGC G EL +M+ GESEA
Sbjct: 496 EHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 555
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RG S + G+R+++ +LTEMDG+ K
Sbjct: 556 NVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKK 613
Score = 328 (120.5 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 80/234 (34%), Positives = 117/234 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG LRE + +P+ + + +K G++ +G+L YGPPG GKT L +A+ EC
Sbjct: 475 EDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQ 534
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R +
Sbjct: 535 ANFISIKGPELLTMWFGESEANVRELFDKARQAA----PCVLFFDELDSIARSRGSSQGD 590
Query: 139 ----DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 591 AGGAGDRVINQILTEMDGMNAKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 646
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R ILK K P+ +VDLE + G+ GADL +C+ A A++ S
Sbjct: 647 DLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRES 700
Score = 261 (96.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 59/160 (36%), Positives = 85/160 (53%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G ++ R + +V ++DIGG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 185 GEAVKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGP 244
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PGC G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 245 PGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 304
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T V R++S LLT MDGL+ +A VI+
Sbjct: 305 DSIAPKR---EKTQGEVERRIVSQLLTLMDGLKSRAHVIV 341
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 177/430 (41%), Positives = 249/430 (57%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +REL+ PL + + +G+K PRG+L+YGPPGTGKT +
Sbjct: 216 ENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLM 275
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ + GESE LR+AF +A ++ P+++FIDEID++
Sbjct: 276 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDSIA 331
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD
Sbjct: 332 PKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRFGRFDRE 387
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R EIL ++TK + L +VDLE IA +GYVG+DL +LC EA M ++
Sbjct: 388 VDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREK 447
Query: 249 SDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDL 298
D E L VTME++R+A V PS R V V E+P V WEDIGGL ++
Sbjct: 448 MDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEV 507
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
K++L ++V++P+ H F + G+SP RG L +GPPG G
Sbjct: 508 KRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGP 567
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL SM+ GESE+ +R+ F +AR AAP ++F DE D + RGGS + +R+++ LL
Sbjct: 568 ELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLL 627
Query: 419 TEMDGLEQAK 428
TEMDG+ K
Sbjct: 628 TEMDGMTSKK 637
Score = 363 (132.8 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 107/314 (34%), Positives = 152/314 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N +W E IGG L E + +P+ + + QK GL RG+L YGPPGTGKT L +
Sbjct: 495 NVRW---EDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAK 551
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV EC A+ + + GESE +R+ F +A + A P VVF+DE+D++
Sbjct: 552 AVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAA----PCVVFLDELDSIAKS 607
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD TS +V V+ +TNR + +D AL R GR D
Sbjct: 608 RGGSVGDAGGASD-RVVNQLLTEMDG----MTSKKNVFVIGATNRPEQLDAALVRPGRLD 662
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R ILK +K P+ ++VD+E IA+ +G+ GADL + + A A+K
Sbjct: 663 TLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
Query: 247 RSSDAN-------ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
S A E AG V MED V P +TR E K + D++
Sbjct: 723 ESISAEIERQKQREAAGE-DVKMEDEEEGEDPV-PELTRAHFEEAMKTARRSVS---DVE 777
Query: 300 KKLQQAVEWPIKHS 313
+ +A +K+S
Sbjct: 778 IRRYEAFAQSLKNS 791
Score = 236 (88.1 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 52/147 (35%), Positives = 79/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +GI P RG L++GPPG
Sbjct: 221 EVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 280
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A +P+IIF DE D + KR T
Sbjct: 281 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKT 337
Query: 406 SITVGERLLSTLLTEMDGLE-QAKVII 431
+ V R++S LLT MDG++ ++ V++
Sbjct: 338 NGEVERRVVSQLLTLMDGMKARSNVVV 364
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 175/422 (41%), Positives = 248/422 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL----C-PRRDHR 135
+I+ + GESE LR+AF + +A P+++FIDE+DA+ C P
Sbjct: 266 FFLINGPEIMSKLAGESESNLRKAFEETEKNA----PAIIFIDELDAIASDDCFPSPQTH 321
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
E + RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD
Sbjct: 322 GEVERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 377
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA---- 251
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 378 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE 437
Query: 252 -----NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAV 306
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V
Sbjct: 438 DETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELV 497
Query: 307 EWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVG 366
++P++H F + G++P +G L +GPPGC G EL +M+ G
Sbjct: 498 QYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 557
Query: 367 ESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ 426
ESEA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+
Sbjct: 558 ESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST 617
Query: 427 AK 428
K
Sbjct: 618 KK 619
Score = 334 (122.6 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 481 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 540
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 541 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 596
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 597 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 651
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S ++
Sbjct: 652 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES 709
Score = 237 (88.5 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 55/148 (37%), Positives = 77/148 (52%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG-GSSS 404
G E+ S GESE+ LR F+ AP+IIF DE D + + S
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQ 319
Query: 405 TSITVGERLLSTLLTEMDGLEQ-AKVII 431
T V R++S LLT MDGL+Q A VI+
Sbjct: 320 THGEVERRIVSQLLTLMDGLKQRAHVIV 347
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 174/419 (41%), Positives = 252/419 (60%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 208 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANETGAF 267
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E +
Sbjct: 268 FFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVE 323
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K HVVV+A+TNR +++D ALRR GRFD R
Sbjct: 324 RRIVSQLLTLMDGLKQRA----HVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGR 379
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR----------SS 249
EIL+++TK + L +VDLE I+ +G+VGADL ALC EA + A+++ S
Sbjct: 380 LEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSI 439
Query: 250 DANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWP 309
DA + L+VTM+D++ A S PS R VE+P V WEDIGGL ++K++LQ+ V++P
Sbjct: 440 DA-DLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYP 498
Query: 310 IKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESE 369
+++ F + G++P RG L +GPPGC G EL +M+ GESE
Sbjct: 499 VEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESE 558
Query: 370 ALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
A +R+ F +AR AAP I+FFDE D + RGG + + +R+++ +LTEMDG+ K
Sbjct: 559 ANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKK 617
Score = 320 (117.7 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 80/238 (33%), Positives = 121/238 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ Y + K G+ RG+L YGPPG GKT L +A+ EC
Sbjct: 479 EDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQ 538
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +R+ F +A A P ++F DE+D++ R D
Sbjct: 539 ANFVSIKGPELLTMWFGESEANVRDVFDKARQAA----PCILFFDELDSIAKARGGGAGD 594
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD T+ +V ++ +TNR D IDPA+ R GR D
Sbjct: 595 AGGAAD-RVINQILTEMDG----MTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 649
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R IL+ +K P+ +VDL ++ G+ GADL +C+ A A++ + +A
Sbjct: 650 PDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEA 707
Score = 247 (92.0 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 55/146 (37%), Positives = 77/146 (52%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 203 IGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVAN 262
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 263 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTH 319
Query: 407 ITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A V++
Sbjct: 320 GEVERRIVSQLLTLMDGLKQRAHVVV 345
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 170/420 (40%), Positives = 246/420 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E GA
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E +
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 325 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC----- 254
E+L+++TK + L +VDLE I+ +GYVGADL ALC EA + ++ D +
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 440
Query: 255 -AGVLSVTMEDWRHARSVVG---PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
A +L+ H + +G PS R VE+P V+WEDIGGL ++K++LQ+ V++P+
Sbjct: 441 DAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPV 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+SP +G L +GPPGC G EL +M+ GESEA
Sbjct: 501 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+R F +AR +AP ++FFDE D + +RG S+ + +R+L+ LLTEMDG+ K +
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTV 620
Score = 323 (118.8 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 81/242 (33%), Positives = 120/242 (49%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 476 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 588
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D ID AL R GR D
Sbjct: 589 RGNSAGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDSALLRPGRLD 643
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I K +K P+ +VD+ A+A G+ GAD+ +C+ A A++
Sbjct: 644 QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703
Query: 247 RS 248
+
Sbjct: 704 EN 705
Score = 250 (93.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/160 (35%), Positives = 84/160 (52%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 190 GEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 250 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T+ V R++S LLT MDGL+ +A VI+
Sbjct: 310 DSIAPKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIV 346
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 172/429 (40%), Positives = 249/429 (58%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +RE++ PL + + +G+K PRG+L+YGPPGTGKT +
Sbjct: 205 ENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLM 264
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ V GESE LR+AF +A +A P+++FIDEID++
Sbjct: 265 ARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNA----PAIIFIDEIDSIA 320
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
P+RD E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD
Sbjct: 321 PKRDKTNGEVERRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDRE 376
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R E+L+++TK + L +VDLEA+A +GYVGAD+ +LC EA M ++
Sbjct: 377 VDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREK 436
Query: 249 SDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
D E L VTM+++R A PS R VE VTW+D+GGL ++K
Sbjct: 437 MDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIK 496
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAE 359
++L++ VE+P+ H +++ G+SP +G L +GPPG G E
Sbjct: 497 EELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPE 556
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L SM+ GESE+ +R+ F +AR AAP+++F DE D + RGGS + +R+++ LLT
Sbjct: 557 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLT 616
Query: 420 EMDGLEQAK 428
EMDG+ K
Sbjct: 617 EMDGMNAKK 625
Score = 349 (127.9 bits), Expect = 8.3e-31, P = 8.3e-31
Identities = 88/251 (35%), Positives = 129/251 (51%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W + +GG E L+E + +P+L+ Q K GL +G+L YGPPGTGK
Sbjct: 478 VVESVNVTW---DDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGK 534
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +AV E A+ + + GESE +R+ F +A + A P+VVF+DE+D
Sbjct: 535 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA----PTVVFLDELD 590
Query: 127 ALCPRR-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
++ R D D R+ +QL T MD K +V V+ +TNR D IDPA+ R
Sbjct: 591 SIAKARGGSLGDAGGASD-RVVNQLLTEMDGMNAKK----NVFVIGATNRPDQIDPAILR 645
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R IL +K PL+ ++L AIA + G+ GADL + + A
Sbjct: 646 PGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAA 705
Query: 242 MSAVKRSSDAN 252
A+K S +A+
Sbjct: 706 KYAIKDSIEAH 716
Score = 239 (89.2 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 53/147 (36%), Positives = 79/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +GI P RG L++GPPG
Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVA 269
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 270 NETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR---DKT 326
Query: 406 SITVGERLLSTLLTEMDGLE-QAKVII 431
+ V R++S LLT MDG++ ++ V++
Sbjct: 327 NGEVERRVVSQLLTLMDGMKARSNVVV 353
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 178/430 (41%), Positives = 248/430 (57%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +RE++ PL + + +G+K PRG+LLYGPPGTGKT +
Sbjct: 213 ENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLM 272
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ + GESE LR+AF +A ++ P+++FIDEID++
Sbjct: 273 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDSIA 328
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD
Sbjct: 329 PKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRFGRFDRE 384
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R EIL+++TK + L +VDLE IA +GYVG+D+ ALC EA M ++
Sbjct: 385 VDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREK 444
Query: 249 SDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDL 298
D E L VTME++R A V PS R V V E+P V WEDIGGL ++
Sbjct: 445 MDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEV 504
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
K+ L++ V++P+ H F + G+SP RG L +GPPG G
Sbjct: 505 KQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGP 564
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL SM+ GESE+ +R+ F +AR AAP I+F DE D + RGGS + +R+++ LL
Sbjct: 565 ELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLL 624
Query: 419 TEMDGLEQAK 428
TEMDG+ K
Sbjct: 625 TEMDGMTSKK 634
Score = 356 (130.4 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 90/246 (36%), Positives = 128/246 (52%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N +W E IGG + LRE + +P+ + + K GL RG+L YGPPGTGKT L +
Sbjct: 492 NVRW---EDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAK 548
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV EC A+ + + GESE +R+ F +A + A P +VF+DE+D++
Sbjct: 549 AVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAA----PCIVFLDELDSIAKA 604
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD TS +V V+ +TNR + +DPAL R GR D
Sbjct: 605 RGGSVGDAGGASD-RVVNQLLTEMDG----MTSKKNVFVIGATNRPEQLDPALCRPGRLD 659
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R ILK +K P+ +VDL+ IA +G+ GADL + + A A+K
Sbjct: 660 SLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIK 719
Query: 247 RSSDAN 252
S A+
Sbjct: 720 ESITAD 725
Score = 239 (89.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 53/147 (36%), Positives = 79/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +GI P RG LL+GPPG
Sbjct: 218 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVA 277
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A +P+IIF DE D + KR T
Sbjct: 278 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKT 334
Query: 406 SITVGERLLSTLLTEMDGLE-QAKVII 431
+ V R++S LLT MDG++ ++ V++
Sbjct: 335 NGEVERRVVSQLLTLMDGMKARSNVVV 361
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 169/420 (40%), Positives = 246/420 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E GA
Sbjct: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E +
Sbjct: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGEVE 325
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 326 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC----- 254
E+L+++TK + L +VDLE ++ +GYVGADL ALC EA + ++ D +
Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEI 441
Query: 255 -AGVLSVTMEDWRHARSVVG---PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
A +L+ H ++ +G PS R VE+P V+WEDIGGL ++K++LQ+ V++P+
Sbjct: 442 DAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPV 501
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+SP +G L +GPPGC G EL +M+ GESEA
Sbjct: 502 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 561
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+R F +AR +AP ++FFDE D + +RG S + +R+L+ LLTEMDG+ K +
Sbjct: 562 NVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTV 621
Score = 337 (123.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 83/242 (34%), Positives = 123/242 (50%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 477 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ I + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 589
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D IDPAL R GR D
Sbjct: 590 RGNSVGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDPALLRPGRLD 644
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R++I K +K P+ +VDL A+A G+ GAD+ +C+ + A++
Sbjct: 645 QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704
Query: 247 RS 248
+
Sbjct: 705 EN 706
Score = 249 (92.7 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 58/160 (36%), Positives = 83/160 (51%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 191 GEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T V R++S LLT MDGL+ +A VI+
Sbjct: 311 DSIAPKR---EKTHGEVERRIVSQLLTLMDGLKSRAHVIV 347
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 171/421 (40%), Positives = 243/421 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E GA
Sbjct: 209 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E +
Sbjct: 269 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD R
Sbjct: 325 RRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
E+L+++TK + L +VDLE I+ +GYVGADL ALC EA + ++ D
Sbjct: 381 LEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSI 440
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E ++VT E + A PS R VE+P V+W DIGGL ++K++LQ+ V++P+
Sbjct: 441 DAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPV 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H F + G+SP +G L +GPPGC G EL +M+ GESEA
Sbjct: 501 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS-TSITVGERLLSTLLTEMDGLEQAKV 429
+R F +AR +AP ++FFDE D + +RGG S +R+L+ LLTEMDG+ K
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT 620
Query: 430 I 430
+
Sbjct: 621 V 621
Score = 317 (116.6 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 77/233 (33%), Positives = 116/233 (49%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +A+ EC A+
Sbjct: 482 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 541
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +RE F +A A P V+F DE+D++ +R D
Sbjct: 542 FISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQRGGGSGGDG 597
Query: 141 -----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
R+ +QL T MD KT V ++ +TNR D ID AL R GR D
Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 653
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R I K +K P+ +VD+ A+A G+ GAD+ +C+ A A++ +
Sbjct: 654 EDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN 706
Score = 248 (92.4 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 57/160 (35%), Positives = 83/160 (51%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 190 GEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 250 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T+ V R++S LLT MDGL+ +A VI+
Sbjct: 310 DSIAPKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIV 346
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 169/418 (40%), Positives = 246/418 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E GA
Sbjct: 211 LGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAF 270
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF++ ++ P+++FIDEIDA+ P+R+ E +
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNS----PAILFIDEIDAIAPKREKAHGEVE 326
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD KT HVVV+A+TNR ++ID ALRR GRFD R
Sbjct: 327 KRIVSQLLTLMDG---LKTRA-HVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 382
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A C+G+VGADL +LC EA + ++ +
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTI 442
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 443 DAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 503 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 562
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP ++FFDE D + RGGS + +R+++ +LTEMDG+ K
Sbjct: 563 NVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKK 620
Score = 339 (124.4 bits), Expect = 9.2e-30, P = 9.2e-30
Identities = 90/288 (31%), Positives = 140/288 (48%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W IGG + L+EL+ +P+ + + K G++ RG+L YGPPG GK
Sbjct: 473 VVETPNTTWSD---IGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGK 529
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +A+ EC A+ I + GESE +R+ F +A + A P V+F DE+D
Sbjct: 530 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA----PCVLFFDELD 585
Query: 127 ALCPRR-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
++ R D D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R
Sbjct: 586 SIAKARGGSVGDAGGAAD-RVINQVLTEMDGMNAKK----NVFIIGATNRPDIIDPAVLR 640
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R +I K +K PL A++DL +A + G+ GADL +C+ A
Sbjct: 641 PGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRAC 700
Query: 242 MSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVE-IPKVT 288
A++ S + + E R RS G + + +P++T
Sbjct: 701 KLAIRESIERE-------IRQEKERQDRSARGEELMEDELADPVPEIT 741
Score = 225 (84.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 54/161 (33%), Positives = 82/161 (50%)
Query: 273 GPSITRGVTVE-IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
G I R E + +V ++D+GG+R ++++ VE P++H F +G+ P RG LL G
Sbjct: 191 GDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFG 250
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G E+ S GESE+ LR F +P+I+F DE
Sbjct: 251 PPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDE 310
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR + V +R++S LLT MDGL+ +A V++
Sbjct: 311 IDAIAPKREKAHGE---VEKRIVSQLLTLMDGLKTRAHVVV 348
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 169/418 (40%), Positives = 246/418 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E GA
Sbjct: 211 LGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAF 270
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF++ ++ P+++FIDEIDA+ P+R+ E +
Sbjct: 271 FFLINGPEIMSKMSGESESNLRKAFAECEKNS----PAILFIDEIDAIAPKREKAHGEVE 326
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD KT HVVV+A+TNR ++ID ALRR GRFD R
Sbjct: 327 KRIVSQLLTLMDG---LKTRA-HVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 382
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE +A C+G+VGADL +LC EA + ++ +
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTI 442
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 443 DAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 502
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 503 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 562
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP ++FFDE D + RGGS + +R+++ +LTEMDG+ K
Sbjct: 563 NVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKK 620
Score = 339 (124.4 bits), Expect = 9.2e-30, P = 9.2e-30
Identities = 90/288 (31%), Positives = 140/288 (48%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W IGG + L+EL+ +P+ + + K G++ RG+L YGPPG GK
Sbjct: 473 VVETPNTTWSD---IGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGK 529
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +A+ EC A+ I + GESE +R+ F +A + A P V+F DE+D
Sbjct: 530 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA----PCVLFFDELD 585
Query: 127 ALCPRR-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
++ R D D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R
Sbjct: 586 SIAKARGGSVGDAGGAAD-RVINQVLTEMDGMNAKK----NVFIIGATNRPDIIDPAVLR 640
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R +I K +K PL A++DL +A + G+ GADL +C+ A
Sbjct: 641 PGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRAC 700
Query: 242 MSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVE-IPKVT 288
A++ S + + E R RS G + + +P++T
Sbjct: 701 KLAIRESIERE-------IRQEKERQDRSARGEELMEDELADPVPEIT 741
Score = 225 (84.3 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 54/161 (33%), Positives = 82/161 (50%)
Query: 273 GPSITRGVTVE-IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
G I R E + +V ++D+GG+R ++++ VE P++H F +G+ P RG LL G
Sbjct: 191 GDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFG 250
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G E+ S GESE+ LR F +P+I+F DE
Sbjct: 251 PPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDE 310
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR + V +R++S LLT MDGL+ +A V++
Sbjct: 311 IDAIAPKREKAHGE---VEKRIVSQLLTLMDGLKTRAHVVV 348
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 172/404 (42%), Positives = 242/404 (59%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
S+H + + IGG + ++ +RE + PL + + G+ PRG+LLYGPPGTGKT
Sbjct: 309 SDHGPQ-VTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTL 367
Query: 69 LVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
+ +A+ E GAH+TVI+ P + K + GESE LR+ F++AS +PS++FIDE+DA
Sbjct: 368 IAKAIANEVGAHVTVINGPEIISKFY-GESESRLRQIFAEASLR----RPSIIFIDELDA 422
Query: 128 LCPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
LCP+R+ + E + R+ + L TLMD S+ S +VV+ +TNR A+D ALRR GRFD
Sbjct: 423 LCPKREGAQNEVEKRVVASLLTLMDGIG-SEGSEGQLVVLGATNRPHALDAALRRPGRFD 481
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANV-DLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ KKVP ++ +A S +GYVGADL ALC+EA + A+
Sbjct: 482 KEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYAL 541
Query: 246 KRS-------SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDL 298
+R+ SD E AG + + D+ V PS R V V++PKV+W DIGGL D+
Sbjct: 542 RRALGKRAHPSDT-EVAGSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDV 600
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
K KL+QAVEWP+KH +F R+GI P +G LL+GPPGC G
Sbjct: 601 KLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGP 660
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
EL + YVGESE +R F++AR+ +PSI+FFDE D + +RG S
Sbjct: 661 ELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVERGNS 704
Score = 250 (93.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 56/140 (40%), Positives = 77/140 (55%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P+VT++ IGGL K +++ VE P+K + F GISP RG LL+GPPG
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G E+ S + GESE+ LR F A L PSIIF DE D + KR G+ +
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQN 432
Query: 405 TSITVGERLLSTLLTEMDGL 424
V +R++++LLT MDG+
Sbjct: 433 E---VEKRVVASLLTLMDGI 449
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 174/412 (42%), Positives = 240/412 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PLLY LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 199 EVPLGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREA 258
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGK-PSVVFIDEIDALCPRRD--H 134
GA L +S ++ A GE+E+ +R F +A L+G+ P+++F+DE+DALCPRR H
Sbjct: 259 GAELLAVSAPALQGARPGETEENVRRVFQRAQE--LAGRRPTLLFLDEVDALCPRRGGPH 316
Query: 135 RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ + R+ +Q+ TL+D + VVVV STNR DA+DPALRR GRFD
Sbjct: 317 QAPES-RVVAQVLTLLDGISGDR----EVVVVGSTNRPDALDPALRRPGRFDREVVIGTP 371
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC 254
R IL++ T K+P+ + VDL +A GYVGADL ALCREA M A+ S +
Sbjct: 372 TLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHALLHSGKNQDN 431
Query: 255 AGVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKH 312
+ + D+ A + PS R V +++ +TWE IGGL D K+KL+Q++EWP+K
Sbjct: 432 PLIDEI---DFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKF 488
Query: 313 STAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALL 372
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 489 PREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKIL 548
Query: 373 RNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
FQ+AR P+++F DE D + R S T V ER+LS LL E+DG+
Sbjct: 549 SQVFQQARANTPAVVFLDEIDSILGSRS-ISKTGCNVQERVLSVLLNELDGV 599
Score = 280 (103.6 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 77/244 (31%), Positives = 122/244 (50%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG A L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 466 EQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 525
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHA-----LSGKPSVVFIDEIDAL-CPRR 132
+S + VG+SEK L + F QA ++ L S++ I C +
Sbjct: 526 CSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGCNVQ 585
Query: 133 DH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ E D ++ + + D ++ + +V++VA+TNR D +D AL R GR
Sbjct: 586 ERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLDDALLRPGR 645
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D R IL++ TK +P+ +V LE +A + GADL LC+EA + A
Sbjct: 646 LDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNLCKEAALLA 705
Query: 245 VKRS 248
++ +
Sbjct: 706 LQEN 709
Score = 161 (61.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+ + +F+ LG++ RG LL GPPG
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R FQRA+ LA P+++F DE D + +RGG +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 409 VGERLLSTLLTEMDGLEQAKVII 431
R+++ +LT +DG+ + ++
Sbjct: 322 ---RVVAQVLTLLDGISGDREVV 341
Score = 43 (20.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 60 GPPGTGKTSLVRAVVRECGAHL 81
G GT + L A +R GAHL
Sbjct: 22 GDQGTQRCRLGPAALRSLGAHL 43
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 168/418 (40%), Positives = 242/418 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +REL+ PL + + +G+K P+G+L+YGPPGTGKT + RAV E GA
Sbjct: 217 IGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAF 276
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A ++ PS++FIDEID++ P+RD E +
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PSIIFIDEIDSIAPKRDKTNGEVE 332
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 333 RRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLEAIA+ +G+VGAD+ +LC EA M ++ D
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETI 448
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L VT +++R A PS R VE VTW+DIGGL ++K +L++ VE+P+
Sbjct: 449 DTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPV 508
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H + + G++P +G L GPPG G EL SM+ GESE+
Sbjct: 509 LHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP+++F DE D + RGGS + +R+++ LLTEMDG+ K
Sbjct: 569 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKK 626
Score = 339 (124.4 bits), Expect = 9.7e-30, P = 9.7e-30
Identities = 87/250 (34%), Positives = 127/250 (50%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W + IGG L+E + +P+L+ Q QK GL +G+L +GPPGTGK
Sbjct: 479 VVENVNVTW---DDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGK 535
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +AV E A+ + + GESE +R+ F +A + A P+VVF+DE+D
Sbjct: 536 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA----PTVVFLDELD 591
Query: 127 ALCPRR-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
++ R D D R+ +QL T MD K +V V+ +TNR D IDPAL R
Sbjct: 592 SIAKARGGSHGDAGGASD-RVVNQLLTEMDGMNAKK----NVFVIGATNRPDQIDPALLR 646
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R IL+ + PL+ +DL IA +G+ GADL + + +
Sbjct: 647 PGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSA 706
Query: 242 MSAVKRSSDA 251
A+K S +A
Sbjct: 707 KFAIKDSIEA 716
Score = 233 (87.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 51/147 (34%), Positives = 79/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG + ++++ VE P++H F +GI P +G L++GPPG
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A +PSIIF DE D + KR T
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR---DKT 327
Query: 406 SITVGERLLSTLLTEMDGLE-QAKVII 431
+ V R++S LLT MDG++ ++ V++
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVV 354
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 168/418 (40%), Positives = 242/418 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +REL+ PL + + +G+K P+G+L+YGPPGTGKT + RAV E GA
Sbjct: 217 IGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANETGAF 276
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ + GESE LR+AF +A ++ PS++FIDEID++ P+RD E +
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PSIIFIDEIDSIAPKRDKTNGEVE 332
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 333 RRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLEAIA+ +G+VGAD+ +LC EA M ++ D
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETI 448
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L VT +++R A PS R VE VTW+DIGGL ++K +L++ VE+P+
Sbjct: 449 DTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPV 508
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H + + G++P +G L GPPG G EL SM+ GESE+
Sbjct: 509 LHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP+++F DE D + RGGS + +R+++ LLTEMDG+ K
Sbjct: 569 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKK 626
Score = 339 (124.4 bits), Expect = 9.7e-30, P = 9.7e-30
Identities = 87/250 (34%), Positives = 127/250 (50%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W + IGG L+E + +P+L+ Q QK GL +G+L +GPPGTGK
Sbjct: 479 VVENVNVTW---DDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGK 535
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +AV E A+ + + GESE +R+ F +A + A P+VVF+DE+D
Sbjct: 536 TLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA----PTVVFLDELD 591
Query: 127 ALCPRR-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
++ R D D R+ +QL T MD K +V V+ +TNR D IDPAL R
Sbjct: 592 SIAKARGGSHGDAGGASD-RVVNQLLTEMDGMNAKK----NVFVIGATNRPDQIDPALLR 646
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R IL+ + PL+ +DL IA +G+ GADL + + +
Sbjct: 647 PGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSA 706
Query: 242 MSAVKRSSDA 251
A+K S +A
Sbjct: 707 KFAIKDSIEA 716
Score = 233 (87.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 51/147 (34%), Positives = 79/147 (53%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG + ++++ VE P++H F +GI P +G L++GPPG
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GESE+ LR F+ A +PSIIF DE D + KR T
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR---DKT 327
Query: 406 SITVGERLLSTLLTEMDGLE-QAKVII 431
+ V R++S LLT MDG++ ++ V++
Sbjct: 328 NGEVERRVVSQLLTLMDGMKARSNVVV 354
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 176/435 (40%), Positives = 249/435 (57%)
Query: 7 IMSEHNEKWKAE---EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPG 63
I E E AE + IGG R + +REL+ PL + + +G+K PRG+L+YGPPG
Sbjct: 209 INREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPG 268
Query: 64 TGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFID 123
TGKT + RAV E GA +I+ + GESE LR+AF +A ++ P+++FID
Sbjct: 269 TGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFID 324
Query: 124 EIDALCPRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
EID++ P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR
Sbjct: 325 EIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRF 380
Query: 183 GRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATM 242
GRFD R EIL+++TK + L +VDLE IA +GYVG+DL +LC EA M
Sbjct: 381 GRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAM 440
Query: 243 SAVKRSSDA---------NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIG 293
++ D E L VTM+++R A PS R VE+P V WEDIG
Sbjct: 441 QQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIG 500
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++K++L++ V+ P+ ++ F R G++P +G L GPPG
Sbjct: 501 GLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFI 560
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL SM+ GESE+ +R+ F +AR AAP ++F DE D + RG S+ S G+R+
Sbjct: 561 SVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS-GGGDRV 619
Query: 414 LSTLLTEMDGLEQAK 428
++ LLTEMDG+ K
Sbjct: 620 VNQLLTEMDGVNSKK 634
Score = 354 (129.7 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 85/240 (35%), Positives = 125/240 (52%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N +W E IGG LRE + P++Y+ + + G+ +G+L +GPPGTGKT L +
Sbjct: 493 NVRW---EDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAK 549
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +R+ F +A + A P VVF+DE+D++
Sbjct: 550 AIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAA----PCVVFLDELDSIAKA 605
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R R+ +QL T MD K +V V+ +TNR D IDPAL R GR D
Sbjct: 606 RGASAGDSGGGDRVVNQLLTEMDGVNSKK----NVFVIGATNRPDQIDPALMRPGRLDQL 661
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
RF IL+ + P+ +VDL A+A + +G+ GADLE + + A A+K S
Sbjct: 662 IYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS 721
Score = 236 (88.1 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 52/149 (34%), Positives = 80/149 (53%)
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
+ +V ++DIGG R ++++ VE P++H F +GI P RG L++GPPG
Sbjct: 218 LAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARA 277
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G E+ S GESE+ LR F+ A +P+IIF DE D + KR
Sbjct: 278 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---E 334
Query: 404 STSITVGERLLSTLLTEMDGLE-QAKVII 431
T+ V R++S LLT MDG++ ++ V++
Sbjct: 335 KTNGEVERRVVSQLLTLMDGMKARSNVVV 363
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 176/410 (42%), Positives = 245/410 (59%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 199 EVPLGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 258
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
GA L +S ++ + GE+E+ +R F +A A G PS++F+DE+DALCP+R R
Sbjct: 259 GAELLAVSAPALQGSRPGETEENVRRVFQRARELASRG-PSLLFLDEMDALCPQRGSRAP 317
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ R+ +Q+ TL+D + VVVV +TNR DA+DPALRR GRFD
Sbjct: 318 ES-RVVAQVLTLLDGASGDR----EVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLK 372
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R EIL++ T K+P+ ++VDL +A GYVGADL ALCREA M A+ S + N+ V
Sbjct: 373 QRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHS-EKNQDNPV 431
Query: 258 LSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
+ D+ A + PS R V ++I V WE+IGGL D+K KL+Q++EWP+K
Sbjct: 432 IDEI--DFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWE 489
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 490 FVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQI 549
Query: 376 FQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR + P+I+F DE D ++GA+ +S T V ER+LS LL E+DG+
Sbjct: 550 FRQARASTPAILFLDEIDSILGAR--SASKTGCDVQERVLSVLLNELDGV 597
Score = 275 (101.9 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 88/277 (31%), Positives = 133/277 (48%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 464 EEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 523
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQA--SSHALSGKPSVVFIDEIDALCPRRDHRR 136
+S + VG+SEK L + F QA S+ A+ + I + A +
Sbjct: 524 CSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSI--LGARSASKTGCD 581
Query: 137 EQDVRIASQLFTLMDS-------NKPSKTSVPH--------VVVVASTNRVDAIDPALRR 181
Q+ R+ S L +D + SK+S V+++A+TNR D +D AL R
Sbjct: 582 VQE-RVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLR 640
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R ILK+ TK +P+ +V LE +A + GADL LC EA
Sbjct: 641 PGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAA 700
Query: 242 MSAVKRSS-DANECAGVLSVTMEDWRHARSVVGPSIT 277
+ A++ + DA +V E + + V PS++
Sbjct: 701 LLALQENGLDAT------TVKQEHFLKSLKTVKPSLS 731
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 169/422 (40%), Positives = 242/422 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +RE+I PL + + LG+K PRG+LLYGPPG+GKT + RAV E GA
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GE+E LR AF +A ++ P+++FIDEID++ P+R+ E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNS----PAIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K S VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 325 RRVVSQLLTLMDGIK----SRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
FEIL+++TK + L +V LE +A++ +G+VGADL LC EA ++ ++ D
Sbjct: 381 FEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEII 440
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E + VT + + A PS R VE+P V W+DIGGL ++K L++ + +PI
Sbjct: 441 DKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPI 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H F + G+SP RG L +GPPGC G EL +M+ GESEA
Sbjct: 501 DHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+R F +AR AAP ++FFDE D +G +RG S G+R+++ LLTE+DG+ K +
Sbjct: 561 NVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNL 620
Query: 431 IY 432
+
Sbjct: 621 FF 622
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/247 (34%), Positives = 126/247 (51%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW + IGG LRE+I +P+ + + +K G+ RG+L YGPPG GKT L +
Sbjct: 476 NVKW---DDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAK 532
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV EC A+ I + GESE +RE F +A + A P V+F DE+D++ +
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAA----PCVLFFDELDSIGTQ 588
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T +D P K ++ + +TNR + +D AL R GR D
Sbjct: 589 RGSSLGDGSGAGD-RVMNQLLTEIDGVGPKK----NLFFIGATNRPELLDEALLRPGRLD 643
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R IL +K P+ NV ++ +A G+ GADL LC+ A +A++
Sbjct: 644 QLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR 703
Query: 247 RSSDANE 253
+ DA E
Sbjct: 704 DAIDAEE 710
Score = 238 (88.8 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 53/160 (33%), Positives = 84/160 (52%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R ++ ++ ++DIGG + ++++ +E P++H F LG+ P RG LL+GP
Sbjct: 190 GDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GE+EA LR F+ A +P+IIF DE
Sbjct: 250 PGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T+ V R++S LLT MDG++ + +V++
Sbjct: 310 DSIAPKR---EKTNGEVERRVVSQLLTLMDGIKSRGQVVV 346
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 169/422 (40%), Positives = 242/422 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + +RE+I PL + + LG+K PRG+LLYGPPG+GKT + RAV E GA
Sbjct: 209 IGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAF 268
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GE+E LR AF +A ++ P+++FIDEID++ P+R+ E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNS----PAIIFIDEIDSIAPKREKTNGEVE 324
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL TLMD K S VVV+A+TNR ++IDPALRR GRFD R
Sbjct: 325 RRVVSQLLTLMDGIK----SRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGR 380
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
FEIL+++TK + L +V LE +A++ +G+VGADL LC EA ++ ++ D
Sbjct: 381 FEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEII 440
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E + VT + + A PS R VE+P V W+DIGGL ++K L++ + +PI
Sbjct: 441 DKEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPI 500
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
H F + G+SP RG L +GPPGC G EL +M+ GESEA
Sbjct: 501 DHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEA 560
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+R F +AR AAP ++FFDE D +G +RG S G+R+++ LLTE+DG+ K +
Sbjct: 561 NVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNL 620
Query: 431 IY 432
+
Sbjct: 621 FF 622
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 86/247 (34%), Positives = 126/247 (51%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW + IGG LRE+I +P+ + + +K G+ RG+L YGPPG GKT L +
Sbjct: 476 NVKW---DDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAK 532
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV EC A+ I + GESE +RE F +A + A P V+F DE+D++ +
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAA----PCVLFFDELDSIGTQ 588
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T +D P K ++ + +TNR + +D AL R GR D
Sbjct: 589 RGSSLGDGSGAGD-RVMNQLLTEIDGVGPKK----NLFFIGATNRPELLDEALLRPGRLD 643
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R IL +K P+ NV ++ +A G+ GADL LC+ A +A++
Sbjct: 644 QLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR 703
Query: 247 RSSDANE 253
+ DA E
Sbjct: 704 DAIDAEE 710
Score = 238 (88.8 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 53/160 (33%), Positives = 84/160 (52%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R ++ ++ ++DIGG + ++++ +E P++H F LG+ P RG LL+GP
Sbjct: 190 GDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGP 249
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G E+ S GE+EA LR F+ A +P+IIF DE
Sbjct: 250 PGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T+ V R++S LLT MDG++ + +V++
Sbjct: 310 DSIAPKR---EKTNGEVERRVVSQLLTLMDGIKSRGQVVV 346
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 177/411 (43%), Positives = 239/411 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 233 EAPLGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 292
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD--HR 135
GA L +S ++ A GE+E+ +R F +A A G P+++F+DE+DALCPRR HR
Sbjct: 293 GAELLAVSAPALQGARPGETEENVRRVFGRARELASRG-PTLLFLDEVDALCPRRGGAHR 351
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ R +Q+ TL+D + + VVVVASTNR DA+DPALRR GRFD
Sbjct: 352 APES-RAVAQVLTLLDGIRGDRD----VVVVASTNRPDALDPALRRPGRFDREVVIGTPT 406
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
R IL++ T K+P+ + VDL +A GYVGADL ALCREA + A+ S + N+
Sbjct: 407 LKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHS-EKNKDN 465
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ T D+ A + PS R V ++I V WE IGGL D+K KL+Q++EWP+K
Sbjct: 466 PAIDET--DFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFP 523
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLR 373
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 524 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 583
Query: 374 NTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR P+I+F DE D + R S T V ER+LS LL E+DG+
Sbjct: 584 QVFRQARANTPAIVFLDEIDSILGSRS-ISKTECNVQERVLSVLLNELDGV 633
Score = 278 (102.9 bits), Expect = 9.8e-22, P = 9.8e-22
Identities = 78/244 (31%), Positives = 120/244 (49%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 500 EQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 559
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHA-----LSGKPSVVFIDEIDAL-CPRR 132
+S + VG+SEK L + F QA ++ L S++ I C +
Sbjct: 560 CSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSRSISKTECNVQ 619
Query: 133 DH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ E D ++ + + D + + +V++VA+TNR D +D AL R GR
Sbjct: 620 ERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRPGR 679
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D R ILK+ TK +P+ +V LE IA + GADL LC+EA + A
Sbjct: 680 LDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADLGNLCKEAALLA 739
Query: 245 VKRS 248
++ +
Sbjct: 740 LQEN 743
Score = 154 (59.3 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+++ + LG++ RG LL GPPG
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R F RAR LA+ P+++F DE D + +RGG+ +
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 355
Query: 409 VGERLLSTLLTEMDGLEQAKVII 431
R ++ +LT +DG+ + ++
Sbjct: 356 ---RAVAQVLTLLDGIRGDRDVV 375
Score = 38 (18.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 63 GTGKTSLVRAVVRECGAHL 81
GT + L A +R GAHL
Sbjct: 59 GTQRCRLGPAALRALGAHL 77
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 176/416 (42%), Positives = 241/416 (57%)
Query: 13 EKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRA 72
E+ + E +GG A ++LREL+ PL Y LGL+ PRG+LL GPPG GKT LVRA
Sbjct: 194 EEPQPEVPLGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRA 253
Query: 73 VVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
V RE GA L +S ++ A GE+E+ +R F +A A S +P+++F+DE+DALCPRR
Sbjct: 254 VARETGAELLAVSAPALQGARPGETEENVRRIFKRARELA-SRRPTLLFLDEVDALCPRR 312
Query: 133 D--HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXX 190
H+ + R+ +Q+ TL+D + VVVV STNR DA+DPALRR GRFD
Sbjct: 313 GGPHQAPES-RVVAQVLTLLDGIGEDR----EVVVVGSTNRPDALDPALRRPGRFDREVV 367
Query: 191 XXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R IL++ T K+P+ VDL +A GYVGADL ALCREA M A+ S +
Sbjct: 368 IGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHS-E 426
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGV--TVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
N+ + T D+ A + PS R V +I V WE IGGL D+K KL+Q++EW
Sbjct: 427 KNQDNPTIDET--DFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEW 484
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGES 368
P+K F R+G++ +G LL+GPPGC GA+L+S +VG+S
Sbjct: 485 PLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDS 544
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
E +L F++AR P+I+F DE D + R S T V +R+LS LL E+DG+
Sbjct: 545 EKILSQVFRQARANTPAIVFLDEIDSILGSRS-ISRTECNVQDRVLSVLLNELDGV 599
Score = 165 (63.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 42/144 (29%), Positives = 71/144 (49%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+++ A + LG+ RG LL GPPG
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R F+RAR LA+ P+++F DE D + +RGG +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPES 321
Query: 409 VGERLLSTLLTEMDGL-EQAKVII 431
R+++ +LT +DG+ E +V++
Sbjct: 322 ---RVVAQVLTLLDGIGEDREVVV 342
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 41/116 (35%), Positives = 60/116 (51%)
Query: 162 HVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAI 221
+V+VVA+TNR D +D AL R GR D R ILK+ TK P+ +V LE +
Sbjct: 635 NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKV 694
Query: 222 ATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSIT 277
A + GADL LC+EA + A++ + V +V E + + V PS++
Sbjct: 695 AAETCFFSGADLGNLCKEAALLALQENG-----LEVTTVKQEHFLESLKTVKPSLS 745
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 166/419 (39%), Positives = 245/419 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E G+
Sbjct: 212 LGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSF 271
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GESE LR+AF + + +P+++FIDEIDA+ P+R+ E +
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKN----QPAILFIDEIDAIAPKREKTNGEVE 327
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K ++VV+A+TNR ++ID ALRR GRFD R
Sbjct: 328 RRIVSQLLTLMDGVKGRS----NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 383
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE IA C+G+VGADL +LC EA + ++ +
Sbjct: 384 LEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQI 443
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A+ PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 444 DAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 503
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 504 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 563
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVG-AKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP ++FFDE D + A+ GG+ +R+++ +LTEMDG+ K
Sbjct: 564 NVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKK 622
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 90/289 (31%), Positives = 141/289 (48%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W IGG + L+EL+ +P+ + + K G++ RG+L YGPPG GK
Sbjct: 474 VVETPNTTWSD---IGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGK 530
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +A+ EC A+ I + GESE +R+ F +A + A P V+F DE+D
Sbjct: 531 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA----PCVLFFDELD 586
Query: 127 ALCPRR------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR 180
++ R D D R+ +Q+ T MD K +V ++ +TNR D IDPA+
Sbjct: 587 SIAKARGGGAGGDGGGASD-RVINQVLTEMDGMNAKK----NVFIIGATNRPDIIDPAVL 641
Query: 181 RSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
R GR D R +ILK +K PL ++DL +A + G+ GADL +C+ A
Sbjct: 642 RPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRA 701
Query: 241 TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVE-IPKVT 288
A++ S + + +E R R G + V+ +P++T
Sbjct: 702 CKLAIRESIEKE-------IRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 220 (82.5 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 48/139 (34%), Positives = 71/139 (51%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ ++D+GG+R ++++ VE P++H F +GI P RG LL GPPG
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ P+I+F DE D + KR T+
Sbjct: 267 ETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR---EKTN 323
Query: 407 ITVGERLLSTLLTEMDGLE 425
V R++S LLT MDG++
Sbjct: 324 GEVERRIVSQLLTLMDGVK 342
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 166/419 (39%), Positives = 245/419 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E G+
Sbjct: 212 LGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSF 271
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQD 139
+I+ V GESE LR+AF + + +P+++FIDEIDA+ P+R+ E +
Sbjct: 272 FFLINGPEVMSKMSGESESNLRKAFEECEKN----QPAILFIDEIDAIAPKREKTNGEVE 327
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI SQL TLMD K ++VV+A+TNR ++ID ALRR GRFD R
Sbjct: 328 RRIVSQLLTLMDGVKGRS----NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 383
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-------- 251
EIL+++TK + L +VDLE IA C+G+VGADL +LC EA + ++ +
Sbjct: 384 LEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQI 443
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
E L+VTME++R A+ PS R VE P TW DIGGL+++K++LQ+ V++P+
Sbjct: 444 DAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPV 503
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+H + + G+ P RG L +GPPGC G EL +M+ GESEA
Sbjct: 504 EHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 563
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVG-AKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R+ F +AR AAP ++FFDE D + A+ GG+ +R+++ +LTEMDG+ K
Sbjct: 564 NVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKK 622
Score = 336 (123.3 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 90/289 (31%), Positives = 141/289 (48%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N W IGG + L+EL+ +P+ + + K G++ RG+L YGPPG GK
Sbjct: 474 VVETPNTTWSD---IGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGK 530
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +A+ EC A+ I + GESE +R+ F +A + A P V+F DE+D
Sbjct: 531 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAA----PCVLFFDELD 586
Query: 127 ALCPRR------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR 180
++ R D D R+ +Q+ T MD K +V ++ +TNR D IDPA+
Sbjct: 587 SIAKARGGGAGGDGGGASD-RVINQVLTEMDGMNAKK----NVFIIGATNRPDIIDPAVL 641
Query: 181 RSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
R GR D R +ILK +K PL ++DL +A + G+ GADL +C+ A
Sbjct: 642 RPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRA 701
Query: 241 TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVE-IPKVT 288
A++ S + + +E R R G + V+ +P++T
Sbjct: 702 CKLAIRESIEKE-------IRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 220 (82.5 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 48/139 (34%), Positives = 71/139 (51%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ ++D+GG+R ++++ VE P++H F +GI P RG LL GPPG
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S GESE+ LR F+ P+I+F DE D + KR T+
Sbjct: 267 ETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR---EKTN 323
Query: 407 ITVGERLLSTLLTEMDGLE 425
V R++S LLT MDG++
Sbjct: 324 GEVERRIVSQLLTLMDGVK 342
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 181/410 (44%), Positives = 239/410 (58%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG +L+E+ITFPL Y ++LGL PRGLLL GPPG GKT LVR V ++ GA
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ-D 139
L ++ V + GESE+ LR F QA A G P V+ IDEID+LCPRR +
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQARDAADDG-PCVLLIDEIDSLCPRRTGSSSAPE 307
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ +QL TLMD+ S V++ +TN+ D++DPALRR GRFD R
Sbjct: 308 NRLVAQLLTLMDAIG----SHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQR 363
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS-DANECAGVL 258
ILK +++PL +VDL +A GYVGADL AL REA + A++ S A+E
Sbjct: 364 RSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRHSQMGASE----- 418
Query: 259 SVTMEDWRHARSVVGPSITR---GVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
V+M+ + A V PS R G T + + WE IGGL D+K KL+Q++EWP++ A
Sbjct: 419 PVSMQHFMQALRHVQPSCLRSSIGAT-DFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEA 477
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F RLG+S RG LL+GPPGC GAEL+S YVG+SE L
Sbjct: 478 FVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQL 537
Query: 376 FQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F +AR APSI+F DE D +VG++ GSSS S +V ++LS LLTE+DG+
Sbjct: 538 FAQARACAPSIVFLDEVDSMVGSREDGSSS-SHSVQSQVLSVLLTELDGV 586
Score = 203 (76.5 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 45/132 (34%), Positives = 73/132 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +P+ + +LG+ PRG+LLYGPPG KT+LV+A
Sbjct: 452 EQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSH 511
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + +VG+SEK L + F+QA + A PS+VF+DE+D++ R+
Sbjct: 512 CSFFSLSGAELFSPYVGDSEKTLAQLFAQARACA----PSIVFLDEVDSMVGSREDGSSS 567
Query: 139 DVRIASQLFTLM 150
+ SQ+ +++
Sbjct: 568 SHSVQSQVLSVL 579
Score = 179 (68.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 66/240 (27%), Positives = 113/240 (47%)
Query: 203 LKLYTKKVPLDANVDLEAIATSCNG-YV--G--ADLEALCREATMSAVKRSSDANECAGV 257
LK++ +++ V ++ +G YV G DL + E V++ + ++ AG+
Sbjct: 100 LKVFVQRLEHKKRVSERSLQELLDGIYVHEGHLVDLSGVKAEIRCVLVEKVNSGSQRAGL 159
Query: 258 LSV-TMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
++ T D ++V + + + +V+ +GG+ D+ L++ + +P+++ +
Sbjct: 160 ITARTCVDISTIQTV------KHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRYPGSL 213
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
+LG+S RG LL GPPG G E+ GESE LR F
Sbjct: 214 RQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVF 273
Query: 377 QRARLAA---PSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMD--GLEQAKVII 431
++AR AA P ++ DE D + +R GSSS RL++ LLT MD G + VII
Sbjct: 274 EQARDAADDGPCVLLIDEIDSLCPRRTGSSSAP---ENRLVAQLLTLMDAIGSHEGFVII 330
Score = 177 (67.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 49/152 (32%), Positives = 75/152 (49%)
Query: 108 ASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIA-----SQLFTLMDSNKPSKTSVPH 162
+SSH++ + V + E+D + R RR +IA Q + + +
Sbjct: 566 SSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNKD 625
Query: 163 VVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIA 222
V++VA+TNR +A+D AL R GR D R +L++ TK VPL +V LE +A
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLA 685
Query: 223 TSCNGYVGADLEALCREATMSAVKRSSDANEC 254
+ GADLE LC+EA + A++ A C
Sbjct: 686 AQTELFSGADLENLCKEAALLALREDGLAVSC 717
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 171/420 (40%), Positives = 249/420 (59%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
A+GG +E+L+ I PL + G+ PRG+LL+GPPGTGKT L+R V A
Sbjct: 246 AVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNA 305
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRRE 137
H+ I+ S+ ++GE+E ALR+ F++A + +PS++FIDEID++ P R D E
Sbjct: 306 HVLTINGPSIVSKYLGETEAALRDIFNEARKY----QPSIIFIDEIDSIAPNRANDDSGE 361
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ R+ + L TLMD + VVV+A+TNR +++DPALRR GRFD
Sbjct: 362 VESRVVATLLTLMDG----MGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVD 417
Query: 198 XRFEILKLYTKKVPLDANV-DLEAI---ATSCNGYVGADLEALCREATMSAVKRS--SDA 251
RF+IL ++ D +V D EAI A+ +GYVGADL ALCRE+ M ++R +DA
Sbjct: 418 ARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDA 477
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
N L VT++D A + PS R + +E+PKV W DIGG +LK K+++ ++ P++
Sbjct: 478 NIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLE 537
Query: 312 HSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEAL 371
S F+RLGIS +G LL+GPPGC G E+++ YVGESE
Sbjct: 538 ASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERA 597
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
+R F++AR AAPSIIFFDE D + R GSS+++ +L++LL E+DG+E+ K ++
Sbjct: 598 IREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA---ANHVLTSLLNEIDGVEELKGVV 654
Score = 371 (135.7 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 96/265 (36%), Positives = 133/265 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG ++E+I PL S +LG+ P+G+LLYGPPG KT +A+ E G +
Sbjct: 518 IGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGIN 577
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + +VGESE+A+RE F +A S A PS++F DEIDAL P RD
Sbjct: 578 FLAVKGPEIFNKYVGESERAIREIFRKARSAA----PSIIFFDEIDALSPDRDG---SST 630
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
A+ + T + + + VV+VA+TNR D ID AL R GR D R
Sbjct: 631 SAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARL 690
Query: 201 EILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
EILK TKK + + VDL +A GY GA++ LC+EA ++A+ D
Sbjct: 691 EILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLD--------- 741
Query: 260 VTMEDWRHARSVVGPSITRGVTVEI 284
V + RH I RG+T E+
Sbjct: 742 VAKVELRHFEKAF-KGIARGITPEM 765
Score = 245 (91.3 bits), Expect = 8.1e-18, P = 8.1e-18
Identities = 56/150 (37%), Positives = 79/150 (52%)
Query: 284 IPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+P+ +++ +GGL + L+ A+E P+ T FS G+SP RG LLHGPPG
Sbjct: 238 LPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLR 297
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G + S Y+GE+EA LR+ F AR PSIIF DE D + R
Sbjct: 298 VVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRAND 357
Query: 403 SSTSITVGERLLSTLLTEMDGLEQA-KVII 431
S + R+++TLLT MDG+ A KV++
Sbjct: 358 DSGEVE--SRVVATLLTLMDGMGAAGKVVV 385
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 177/413 (42%), Positives = 240/413 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 189 EAPLGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 248
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD--HR 135
GA L +S ++ A GE+E+ +R F +A A G P+++F+DE+DALCPRR HR
Sbjct: 249 GAELLAVSAPALQGARPGETEENVRRVFGRARELASRG-PTLLFLDEVDALCPRRGGAHR 307
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ R +Q+ TL+D + + VVVVASTNR DA+DPALRR GRFD
Sbjct: 308 APES-RAVAQVLTLLDGIRGDRD----VVVVASTNRPDALDPALRRPGRFDREVVIGTPT 362
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
R IL++ T K+P+ + VDL +A GYVGADL ALCREA + A+ S + N+
Sbjct: 363 LKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHALLHS-EKNKDN 421
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ T D+ A + PS R V ++I V WE IGGL D+K KL+Q++EWP+K
Sbjct: 422 PAIDET--DFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFP 479
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALL- 372
F R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 480 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 539
Query: 373 -RNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ F++AR P+I+F DE D + R S T V ER+LS LL E+DG+
Sbjct: 540 QQKVFRQARANTPAIVFLDEIDSILGSRS-ISKTECNVQERVLSVLLNELDGV 591
Score = 268 (99.4 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 78/246 (31%), Positives = 121/246 (49%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 456 EQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 515
Query: 79 AHLTVISPHSVHKAHVGESEKAL--REAFSQASSHA-----LSGKPSVVFIDEIDAL-CP 130
+S + VG+SEK L ++ F QA ++ L S++ I C
Sbjct: 516 CSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILGSRSISKTECN 575
Query: 131 RRDH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
++ E D ++ + + D + + +V++VA+TNR D +D AL R
Sbjct: 576 VQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDALLRP 635
Query: 183 GRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATM 242
GR D R ILK+ TK +P+ +V LE IA + GADL LC+EA +
Sbjct: 636 GRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADLGNLCKEAAL 695
Query: 243 SAVKRS 248
A++ +
Sbjct: 696 LALQEN 701
Score = 154 (59.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/143 (27%), Positives = 68/143 (47%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + L++ + P+++ + LG++ RG LL GPPG
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 352 XXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGAKRGGSSSTSIT 408
L GE+E +R F RAR LA+ P+++F DE D + +RGG+ +
Sbjct: 252 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 311
Query: 409 VGERLLSTLLTEMDGLEQAKVII 431
R ++ +LT +DG+ + ++
Sbjct: 312 ---RAVAQVLTLLDGIRGDRDVV 331
Score = 38 (18.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 63 GTGKTSLVRAVVRECGAHL 81
GT + L A +R GAHL
Sbjct: 25 GTQRCRLGPAALRALGAHL 43
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 174/399 (43%), Positives = 233/399 (58%)
Query: 29 EALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHS 88
E+L+E++ P + +KLGL P G+LL GPPG GKT LV+AV RE GA+L IS +
Sbjct: 207 ESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPA 266
Query: 89 VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ-DVRIASQLF 147
++ + GESE+ LR F + + G P+V+FIDEIDALCP+R + R+ +QL
Sbjct: 267 LYGSRPGESEENLRSVFEKGREMSCEG-PTVLFIDEIDALCPKRGSSNSAPEDRLVAQLL 325
Query: 148 TLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYT 207
TL+D +VVVA+TNR DA+DPALRR GRFD R IL++ T
Sbjct: 326 TLLDGVGRKD----RMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLT 381
Query: 208 KKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRH 267
+P+ ++DL +A GYVGADL ALCREA M AV SS + A VL + M D++
Sbjct: 382 CSMPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAVFHSS--LDSAEVL-INMADFQE 438
Query: 268 ARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR 325
A + PS R E +TWE IGGL D+K KL+Q+VEWP+K AF+R+G++ +
Sbjct: 439 AFKKIQPSSFRSAIGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPK 498
Query: 326 GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPS 385
G LL+GP GC GAEL+S YVG+SE +L F++AR P+
Sbjct: 499 GVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPA 558
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
IIF DE D + R S S V ER+LS LL E+DG+
Sbjct: 559 IIFLDEIDSILGSRSHSKSGH-GVSERVLSVLLNELDGV 596
Score = 274 (101.5 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 78/254 (30%), Positives = 122/254 (48%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ + +P+ ++GL P+G+LLYGP G KT+LV+AV C
Sbjct: 463 EQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCH 522
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQA------------------------SSHALS 114
+S + +VG+SEK L + F QA S H +S
Sbjct: 523 CSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVS 582
Query: 115 GKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+ V ++E+D + + RR +++ + +T +VVA+TNR D
Sbjct: 583 ERVLSVLLNELDGVGLKVTERRGNKLQLELEF---------QETLSRDFMVVAATNRPDM 633
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+D AL R GR D R ILK+ T+K+PLD +V L+ IA + + GAD+E
Sbjct: 634 LDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIE 693
Query: 235 ALCREATMSAVKRS 248
LC+EA + A++ +
Sbjct: 694 NLCKEAALLALQEN 707
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/158 (31%), Positives = 77/158 (48%)
Query: 275 SITRGVTVEIPKVTWED-----IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
+I +T+E ++ ED + GL D+ + L++ V+ P + F +LG+S G LL
Sbjct: 177 TIKEVITLERYRLLTEDTAKIPVAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLL 236
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR---LAAPSI 386
GPPG G LY GESE LR+ F++ R P++
Sbjct: 237 VGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTV 296
Query: 387 IFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+F DE D + KRG S+S +RL++ LLT +DG+
Sbjct: 297 LFIDEIDALCPKRGSSNSAP---EDRLVAQLLTLLDGV 331
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 168/417 (40%), Positives = 237/417 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E GA
Sbjct: 206 IGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 265
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+I+ + GE E A R+ S A K + +F + D P E +
Sbjct: 266 FFLINGPEIMSKLAGEGESACRKKISPAPPPL---KTAGIF--KSDDCFPSPQTHGEVER 320
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD R
Sbjct: 321 RIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 376
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA--------- 251
EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 377 EILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETID 436
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P++
Sbjct: 437 AEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVE 496
Query: 312 HSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEAL 371
H F + G++P +G L +GPPGC G EL +M+ GESEA
Sbjct: 497 HPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 556
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
+R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 557 VREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 613
Score = 334 (122.6 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 475 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 534
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 535 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 590
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 591 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S ++
Sbjct: 646 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES 703
Score = 174 (66.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 47/147 (31%), Positives = 66/147 (44%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ S GE E+ R A + F D S T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFP-----SPQT 314
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 315 HGEVERRIVSQLLTLMDGLKQRAHVIV 341
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 173/412 (41%), Positives = 239/412 (58%)
Query: 18 EEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E +GG ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV RE
Sbjct: 192 EVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREA 251
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
GA L +S ++ GE+E+ +R F +A A G PS++F+DE+DALCPRR +R
Sbjct: 252 GAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRG-PSLLFLDEVDALCPRRGGPQR 310
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ R+ +Q+ TL+D + VVVV +TNR D +DPALRR GRFD
Sbjct: 311 APESRVVAQVLTLLDGIHGDR----EVVVVGATNRPDELDPALRRPGRFDREVIIGTPTL 366
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
R IL + T K+P+ +++DL +A GYVGADL ALCREA A+ ++ + N+
Sbjct: 367 KQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKN-EKNQNNP 425
Query: 257 VLSVTMEDWRHARSVVGPSITR---GVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ T D+ A V PS R G+T +I V WE IGGL D+K KL+Q VEWP+K
Sbjct: 426 KIEET--DFLEAFKKVQPSSFRSSIGLT-DIRPVGWEQIGGLEDVKLKLKQCVEWPLKFP 482
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLR 373
F+R+G++ +G LL+GPPGC GA+L+S +VG+SE +L
Sbjct: 483 QEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLS 542
Query: 374 NTFQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR P+++F DE D V+G++ GSS ER+LS LL E+DG+
Sbjct: 543 QVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDAR--ERVLSVLLNELDGV 592
Score = 289 (106.8 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 84/273 (30%), Positives = 126/273 (46%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ + +PL + + ++GL P+GLLLYGPPG KT+LVRA+ C
Sbjct: 459 EQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCH 518
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHA-----LSGKPSVVFIDEIDAL-CPRR 132
+ + VG+SEK L + F QA ++ L SV+ + + C R
Sbjct: 519 CSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDAR 578
Query: 133 DH-----RREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ E D VR + + + + V++V +TNR D +D AL R GR
Sbjct: 579 ERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGR 638
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
D R ILK+ T +P+ NV LE +A + GADL LC+EA + A
Sbjct: 639 LDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENLAAETCYFSGADLRNLCKEAALFA 698
Query: 245 VKRSSDANECAGVLSVTMEDWRHARSVVGPSIT 277
++ + +V E + A V PS+T
Sbjct: 699 LQENG-----LEATTVEQEHFTEALKTVKPSLT 726
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/154 (29%), Positives = 75/154 (48%)
Query: 282 VEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXX 340
VE P +VT +GGL + L++ + P+ + A + LG++ RG LL GPPG
Sbjct: 187 VEPPGEVT---LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQL 243
Query: 341 XXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR-LAA--PSIIFFDEADVVGA 397
L GE+E +R FQRA+ LA+ PS++F DE D +
Sbjct: 244 VRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCP 303
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
+RGG + R+++ +LT +DG+ + ++
Sbjct: 304 RRGGPQRAPES---RVVAQVLTLLDGIHGDREVV 334
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 162/421 (38%), Positives = 241/421 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG +E L+ I PL + G+ PRG+LL+GPPGTGKT L+R V
Sbjct: 229 DQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSIT 288
Query: 79 -AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHR 135
AH+ I+ S+ ++GE+E A+R+ F++A +PS++F+DEID++ P R D
Sbjct: 289 EAHVLTINGPSIVSKYLGETENAIRDIFNEAKKF----QPSIIFMDEIDSIAPSRTSDDS 344
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
E + R+ +QL T+MD + +VV+ +TNR ++ID ALRR GRFD
Sbjct: 345 GETESRVVAQLLTVMDGMGDNG----RIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPD 400
Query: 196 XXXRFEIL-----KLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R EIL K+ ++K + ++ +IA+ +GYVGADL ALCRE+ M A+ R
Sbjct: 401 VEAREEILTKQFAKMNSEKCQITKE-EIASIASKTHGYVGADLTALCRESVMKAINRGLT 459
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
+ VT++D HA + PS R + +E+PKV W DIGG +LK+KL + V+ P+
Sbjct: 460 VGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIEVVQLPL 519
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+ S +F LG+S +G LL+GPPGC G E+++ YVGESE
Sbjct: 520 EASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESER 579
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+R F++AR A+PSIIFFDE D + R G SST T +L++LL E+DG+E+ K +
Sbjct: 580 AIREIFRKARAASPSIIFFDEIDAIAGDRDGDSST--TAASNVLTSLLNEIDGVEELKGV 637
Query: 431 I 431
+
Sbjct: 638 V 638
Score = 351 (128.6 bits), Expect = 4.1e-31, P = 4.1e-31
Identities = 89/267 (33%), Positives = 138/267 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L E++ PL S + LG+ P+G+LLYGPPG KT +A+ E G +
Sbjct: 501 IGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLN 560
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + +VGESE+A+RE F +A + PS++F DEIDA+ RD +
Sbjct: 561 FLAVKGPEIFNKYVGESERAIREIFRKARA----ASPSIIFFDEIDAIAGDRDG--DSST 614
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
AS + T + + + VV+V +TN+ IDPAL R GR D R
Sbjct: 615 TAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARL 674
Query: 201 EILKLYTKKVPL---DANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
+IL+ ++K L D +VDL+ +A +G GA++ LC+EA ++A+ + +A
Sbjct: 675 QILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEAT----- 729
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEI 284
+VT + + HA I+RG+T E+
Sbjct: 730 -TVTNKHFEHALK----GISRGITPEM 751
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 50/148 (33%), Positives = 77/148 (52%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX-XX 344
++T++ +GGL + L+ +E P+ + T FS GISP RG LLHGPPG
Sbjct: 225 QITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVA 284
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G + S Y+GE+E +R+ F A+ PSIIF DE D + R +S
Sbjct: 285 NSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR--TSD 342
Query: 405 TSITVGERLLSTLLTEMDGL-EQAKVII 431
S R+++ LLT MDG+ + ++++
Sbjct: 343 DSGETESRVVAQLLTVMDGMGDNGRIVV 370
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 165/418 (39%), Positives = 241/418 (57%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
+IGG +A + +R+++ P + + PRG+LLYGPPGTGKT ++RAV E A
Sbjct: 280 SIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANA 339
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ I SV ++GE+E LR+ F A +H +PS++FIDEIDAL P+R + E
Sbjct: 340 QVFTIDGPSVVGKYLGETESRLRKIFEDARAH----QPSIIFIDEIDALAPKRTEDVSEA 395
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ R + L TL+D + VVV+A+TNR ++ID ALRR GR +
Sbjct: 396 ESRAVATLLTLLDG----MANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSA 451
Query: 199 RFEILKLYTKKVPLDAN-VDLEAIATSCNGYVGADLEALCREATMSAVKRS-SDANECAG 256
R +I+KL VP + N LE +A+ + YVGADL A+ REA + A+KR+ S + +G
Sbjct: 452 RLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSG 511
Query: 257 VL---SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ +V M+D A S V S R +E P V W DIGG ++K+KL+++VEWP+ H
Sbjct: 512 LDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHG 571
Query: 314 TAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLR 373
FSRLG+ P +G LL+GPPGC G EL+ +VGESE +R
Sbjct: 572 ETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVR 631
Query: 374 NTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
FQ+AR A+PS+IFFDE D + A RG +S+ +R+++ LL E+DG+E + ++
Sbjct: 632 QVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRNVL 684
Score = 366 (133.9 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 86/247 (34%), Positives = 130/247 (52%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
+M N W IGG + L+E + +PL + +LG++ P+G+LLYGPPG K
Sbjct: 539 MMESPNVHWSD---IGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSK 595
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T +A+ E G + + + VGESE+A+R+ F +A PSV+F DEID
Sbjct: 596 TITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQ----ASPSVIFFDEID 651
Query: 127 ALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
AL R D R+ + L +D + ++ +V+V+A+TNR D IDPAL R GR D
Sbjct: 652 ALTANRGEDNSSD-RVVAALLNELDGIE----ALRNVLVLAATNRPDMIDPALMRPGRLD 706
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +I+K+ +K+ +VDL+ IA G GA++ ALC+EA + A+
Sbjct: 707 RLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMH 766
Query: 247 RSSDANE 253
+A E
Sbjct: 767 EDLEAKE 773
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 59/185 (31%), Positives = 85/185 (45%)
Query: 248 SSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVE 307
SS E +L + ED + G T+ VT+ IGGL+ +++ VE
Sbjct: 237 SSMEIETPDLLKLPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVE 296
Query: 308 WPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGE 367
P ++ F I P RG LL+GPPG G + Y+GE
Sbjct: 297 LPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGE 356
Query: 368 SEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
+E+ LR F+ AR PSIIF DE D + KR S + + R ++TLLT +DG+ A
Sbjct: 357 TESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES---RAVATLLTLLDGMANA 413
Query: 428 -KVII 431
KV++
Sbjct: 414 GKVVV 418
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 454 (164.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N+ E+ +GG + + +RELI PL Y +G+ P+G+L++G PGTGKTS+
Sbjct: 519 ENNDDITYED-LGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSI 577
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+A+ E A+ +I+ + H+GESE+ LR+ F +AS P ++FIDEID++
Sbjct: 578 AKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKT----PCIIFIDEIDSIA 633
Query: 130 PRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
+R E + R+ SQL TLMD K + +V+V+A+TNR ++IDPALRR GRFD
Sbjct: 634 NKRSKSNNELEKRVVSQLLTLMDGLKKNN----NVLVLAATNRPNSIDPALRRFGRFDRE 689
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R+EIL TKK+ LD +V+L IA C+GYVGADL LC EA + +K
Sbjct: 690 IEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIK 747
Score = 354 (129.7 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 79/230 (34%), Positives = 116/230 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG E L+E I +PL Y K + +G+LLYGPPG GKT L +A+ EC A+
Sbjct: 936 IGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKAN 995
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +R+ F +A + P ++F DEID+L R+ D
Sbjct: 996 FISVKGPELLTMWFGESEANVRDLFDKARA----ASPCIIFFDEIDSLAKERNSNTNNDA 1051
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T +D KT + ++A+TNR D +D AL R GR D
Sbjct: 1052 SDRVINQILTEIDGINEKKT----IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R+ I K K PL+ +VD+ +A G+ GAD+ LC+ A A+K +
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET 1157
Score = 313 (115.2 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 60/173 (34%), Positives = 105/173 (60%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ + ++HA ++ PS R V+IP VTW DIGG+ ++K++L++ + +P+++ ++
Sbjct: 902 LTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYN 961
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+ + +G LL+GPPGC G EL +M+ GESEA +R+ F
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFD 1021
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+AR A+P IIFFDE D + +R +S+T+ +R+++ +LTE+DG+ + K I
Sbjct: 1022 KARAASPCIIFFDEIDSLAKER--NSNTNNDASDRVINQILTEIDGINEKKTI 1072
Score = 231 (86.4 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 49/140 (35%), Positives = 77/140 (55%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+T+ED+GG++ K+++ +E P+K+ F +GIS +G L+HG PG
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S ++GESE LR F++A P IIF DE D + KR S++
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE- 642
Query: 407 ITVGERLLSTLLTEMDGLEQ 426
+ +R++S LLT MDGL++
Sbjct: 643 --LEKRVVSQLLTLMDGLKK 660
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 454 (164.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N+ E+ +GG + + +RELI PL Y +G+ P+G+L++G PGTGKTS+
Sbjct: 519 ENNDDITYED-LGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSI 577
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+A+ E A+ +I+ + H+GESE+ LR+ F +AS P ++FIDEID++
Sbjct: 578 AKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKT----PCIIFIDEIDSIA 633
Query: 130 PRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
+R E + R+ SQL TLMD K + +V+V+A+TNR ++IDPALRR GRFD
Sbjct: 634 NKRSKSNNELEKRVVSQLLTLMDGLKKNN----NVLVLAATNRPNSIDPALRRFGRFDRE 689
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R+EIL TKK+ LD +V+L IA C+GYVGADL LC EA + +K
Sbjct: 690 IEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIK 747
Score = 354 (129.7 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 79/230 (34%), Positives = 116/230 (50%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG E L+E I +PL Y K + +G+LLYGPPG GKT L +A+ EC A+
Sbjct: 936 IGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKAN 995
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +R+ F +A + P ++F DEID+L R+ D
Sbjct: 996 FISVKGPELLTMWFGESEANVRDLFDKARA----ASPCIIFFDEIDSLAKERNSNTNNDA 1051
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T +D KT + ++A+TNR D +D AL R GR D
Sbjct: 1052 SDRVINQILTEIDGINEKKT----IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R+ I K K PL+ +VD+ +A G+ GAD+ LC+ A A+K +
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET 1157
Score = 313 (115.2 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 60/173 (34%), Positives = 105/173 (60%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ + ++HA ++ PS R V+IP VTW DIGG+ ++K++L++ + +P+++ ++
Sbjct: 902 LTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYN 961
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+ + +G LL+GPPGC G EL +M+ GESEA +R+ F
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFD 1021
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+AR A+P IIFFDE D + +R +S+T+ +R+++ +LTE+DG+ + K I
Sbjct: 1022 KARAASPCIIFFDEIDSLAKER--NSNTNNDASDRVINQILTEIDGINEKKTI 1072
Score = 231 (86.4 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 49/140 (35%), Positives = 77/140 (55%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+T+ED+GG++ K+++ +E P+K+ F +GIS +G L+HG PG
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G E+ S ++GESE LR F++A P IIF DE D + KR S++
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE- 642
Query: 407 ITVGERLLSTLLTEMDGLEQ 426
+ +R++S LLT MDGL++
Sbjct: 643 --LEKRVVSQLLTLMDGLKK 660
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 388 (141.6 bits), Expect = 6.1e-35, P = 6.1e-35
Identities = 85/234 (36%), Positives = 133/234 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L+E I +PL Y ++G+K P+G+LLYGPPG KT L +A+ E G +
Sbjct: 624 IGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLN 683
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + VGESE+A+R+ F +A ++ PS++F DEID L R V
Sbjct: 684 FIAVKGPELLSKWVGESERAVRDIFKKARQNS----PSILFFDEIDGLAISRSGEGSGAV 739
Query: 141 -RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ SQL T MD +P + +V ++ +TNR D ID A+ R+GR D R
Sbjct: 740 ERVVSQLLTEMDGIQP----LTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDAR 795
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
EI ++ KKVP +++D+ ++ +GY GA++ ++CREA+++A+K +A E
Sbjct: 796 KEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAKE 849
Score = 381 (139.2 bits), Expect = 1.7e-70, Sum P(2) = 1.7e-70
Identities = 92/253 (36%), Positives = 134/253 (52%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG V+ +RELI + G+K P+G+LLYGPPGTGKT L R V +
Sbjct: 312 QSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTN 371
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
A L I+ + G +EK L++ F A+ + PS++FIDE+DALCP+R D+ E
Sbjct: 372 ATLFTINGADILDKFYGMTEKTLQKIFKDAAQKS----PSIIFIDELDALCPKREDNSSE 427
Query: 138 QDVRIASQLFTLMDS----------------NKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+ RI L TLMD N V+V+ TNR D+ID ALRR
Sbjct: 428 VEKRIVGSLLTLMDGVVSTSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALRR 487
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREA 240
GRFD R +IL ++ K+P + ++ IA+ +G+VGAD+E+LC+EA
Sbjct: 488 PGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMIASKTHGFVGADIESLCKEA 547
Query: 241 TMSAVKRSSDANE 253
++ R + N+
Sbjct: 548 SLKCFNRIKNENQ 560
Score = 371 (135.7 bits), Expect = 1.7e-70, Sum P(2) = 1.7e-70
Identities = 75/180 (41%), Positives = 107/180 (59%)
Query: 246 KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQA 305
K+ + ++ ++M D A + V PS R V VEIPKV W DIGG +K+KL++A
Sbjct: 578 KQEENLQNLLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEA 637
Query: 306 VEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYV 365
+EWP+K+ +F R+GI P +G LL+GPPGC G EL S +V
Sbjct: 638 IEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWV 697
Query: 366 GESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
GESE +R+ F++AR +PSI+FFDE D + R G S ++ ER++S LLTEMDG++
Sbjct: 698 GESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGEGSGAV---ERVVSQLLTEMDGIQ 754
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 43/139 (30%), Positives = 70/139 (50%)
Query: 287 VTWEDIGGLRDLK-KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+ ++ IGGL DL+ K++++ ++ G+ P +G LL+GPPG
Sbjct: 309 LNFQSIGGL-DLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
GA++ + G +E L+ F+ A +PSIIF DE D + KR +SS
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSE 427
Query: 406 SITVGERLLSTLLTEMDGL 424
V +R++ +LLT MDG+
Sbjct: 428 ---VEKRIVGSLLTLMDGV 443
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 386 (140.9 bits), Expect = 3.0e-70, Sum P(2) = 3.0e-70
Identities = 75/169 (44%), Positives = 103/169 (60%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
LSV ED+ +A++ + PS R V +E+PKV WED+GG ++K +L +AVEWP KH AF
Sbjct: 692 LSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFK 751
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
R+G P G L+ GPPGC G EL+S +VGESE +R+ F
Sbjct: 752 RIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFA 811
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ 426
+AR APSIIFFDE D + + RG + ++V +R++S LL E+DGL Q
Sbjct: 812 KARANAPSIIFFDEIDSLASIRG-KENDGVSVSDRVMSQLLVELDGLHQ 859
Score = 366 (133.9 bits), Expect = 3.0e-70, Sum P(2) = 3.0e-70
Identities = 90/240 (37%), Positives = 136/240 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG LR++I + +S + LGL+ +G+L++GPPGTGKTSL R R G +
Sbjct: 387 LGGLSKEYAILRDIIDSSSIKNSLSS-LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVN 445
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP-RRDHRREQD 139
++ + ++GESEKAL E F AS+ P+VVFID++DA+ P R++ E
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASN----ATPAVVFIDDLDAIAPARKEGGEELS 501
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ + L LMD S+T VVV+A+TNR D+I+PALRR GR D R
Sbjct: 502 QRMVATLLNLMDGI--SRTD--GVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQR 557
Query: 200 FEILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+IL + + + +N+ +E +A + +G+VGADL ALC EA ++R D + + L
Sbjct: 558 SDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNL 617
Score = 353 (129.3 bits), Expect = 4.7e-31, P = 4.7e-31
Identities = 82/238 (34%), Positives = 128/238 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG L E + +P + +++G + P G+L++GPPG KT + RAV E
Sbjct: 724 EDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAK 783
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ + + VGESEKA+R F++A ++A PS++F DEID+L R +
Sbjct: 784 LNFLAVKGPELFSKWVGESEKAVRSLFAKARANA----PSIIFFDEIDSLASIRGKENDG 839
Query: 139 -DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
V R+ SQL +D + V V+A+TNR D ID AL R GRFD
Sbjct: 840 VSVSDRVMSQLLVELDGLH-QRVGV---TVIAATNRPDKIDSALLRPGRFDRLLYVGPPN 895
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R ILK++ +K+P +++ L+ +A+ GY GAD+ +CREA ++A++ S + E
Sbjct: 896 ETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEE 953
Score = 188 (71.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 57/211 (27%), Positives = 94/211 (44%)
Query: 233 LEALCREATMSAVKRSSDANECAGVLSVTMED--WRH-----ARSVVGPSITRGVTVEIP 285
L +C A KR SD + + E + H A + G + +G+ +
Sbjct: 318 LSEICIFCVKRADKRPSDTSNRNHAFMINQETKVYLHHTLDLASEIQGRTFVQGLQFDEG 377
Query: 286 KVTWEDIGGLRDLKKK---LQQAVEWP-IKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
+ +I L L K+ L+ ++ IK+S S LG+ P +G L+HGPPG
Sbjct: 378 ENVGCEISKLGGLSKEYAILRDIIDSSSIKNS--LSSLGLRPTKGVLIHGPPGTGKTSLA 435
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG-AKRG 400
G E+ S Y+GESE L F+ A A P+++F D+ D + A++
Sbjct: 436 RTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKE 495
Query: 401 GSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
G S +R+++TLL MDG+ + ++
Sbjct: 496 GGEELS----QRMVATLLNLMDGISRTDGVV 522
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 159/427 (37%), Positives = 236/427 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG ++ L E++ +P+L+ + L + P+G+LL GPPGTGKT LVR V
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQAS--SHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ I + +++GE+E+ LR F +AS S A S P VVFIDEID +CP R +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQN 408
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ R+ Q TL+D K ++ +++A+TNR + ID ALRR GR D
Sbjct: 409 ESRVVGQFLTLLDGIGARKGNL---IIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQ 465
Query: 199 RFEILKLYTKKVPLDANVD--LEAIATSCNGYVGADLEALCREATMSAVKR--------- 247
R +ILKLY K+P+ L+ IA GYVGA+++ LCR++ A +
Sbjct: 466 RLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNN 525
Query: 248 SSDANECAGVLSVTMEDWRHARSVVGPSITRGV-TVE-IPKVTWEDIGGLRDLKKKLQQA 305
+ NE + +ED+R + SI +G VE I V+W+DIGGL D+K++L+QA
Sbjct: 526 EQNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWDDIGGLDDIKEELRQA 585
Query: 306 VEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYV 365
+EWP + +F + G+SP +G +L+GPPGC GA ++S Y+
Sbjct: 586 IEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYL 645
Query: 366 GESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS-ITVGERLLSTLLTEMDGL 424
G+SE +R+ F++AR PSI+FFDE D + +KR S ++S R+LST L EMDG+
Sbjct: 646 GDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGV 705
Query: 425 EQAKVII 431
EQ +I
Sbjct: 706 EQLNGVI 712
Score = 380 (138.8 bits), Expect = 3.7e-34, P = 3.7e-34
Identities = 89/247 (36%), Positives = 134/247 (54%)
Query: 4 KGRIMSEH--NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
KG + E+ N W + IGG E LR+ I +P LY +K GL P+G++LYGP
Sbjct: 556 KGEHLVENISNVSW---DDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGP 612
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PG KT+LV+AV +S ++ ++G+SE+ +R+ F +A PS++F
Sbjct: 613 PGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTT----PSILF 668
Query: 122 IDEIDALCPRRD-HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR 180
DEIDA+ +R+ S++ + + + V+V+ +TNR+D ID AL
Sbjct: 669 FDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALL 728
Query: 181 RSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
R GRFD R +ILK+ TK +PL NV+L I+ NG+ GADLE LCREA
Sbjct: 729 RPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREA 788
Query: 241 TMSAVKR 247
+ +++R
Sbjct: 789 SFQSLRR 795
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 145/344 (42%), Positives = 205/344 (59%)
Query: 95 GESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-EQDVRIASQLFTLMDSN 153
GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E + RI SQL TLMD
Sbjct: 12 GESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGL 67
Query: 154 KPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLD 213
K HV+V+A+TNR ++IDPALRR GRFD R EIL+++TK + L
Sbjct: 68 KQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA 123
Query: 214 ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA---------NECAGVLSVTMED 264
+VDLE + +G+VGADL ALC EA + A+++ D E L+VTM+D
Sbjct: 124 DDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDD 183
Query: 265 WRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPV 324
+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++P++H F + G++P
Sbjct: 184 FRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPS 243
Query: 325 RGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAP 384
+G L +GPPGC G EL +M+ GESEA +R F +AR AAP
Sbjct: 244 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 303
Query: 385 SIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 304 CVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 347
Score = 334 (122.6 bits), Expect = 7.6e-30, P = 7.6e-30
Identities = 83/238 (34%), Positives = 122/238 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 209 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 268
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----D 133
A+ I + GESE +RE F +A A P V+F DE+D++ R D
Sbjct: 269 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 324
Query: 134 HRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D
Sbjct: 325 GGGAAD-RVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 379
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S ++
Sbjct: 380 PDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES 437
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/76 (47%), Positives = 45/76 (59%)
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
G E+ S GESE+ LR F+ A AP+IIF DE D + KR T V R++S
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKTHGEVERRIVSQ 59
Query: 417 LLTEMDGLEQ-AKVII 431
LLT MDGL+Q A VI+
Sbjct: 60 LLTLMDGLKQRAHVIV 75
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 415 (151.1 bits), Expect = 7.1e-38, P = 7.1e-38
Identities = 112/295 (37%), Positives = 159/295 (53%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W A+ G R E L I P+ Y + + +G+ P G+L+YGPPG GKT L +
Sbjct: 562 NVTWDDVGALSGVR---EELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAK 618
Query: 72 AVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
A+ EC A+ ++V P ++K +VGESE+A+R+ F +A++ + P V+F DE DAL P
Sbjct: 619 AIASECQANFISVKGPELLNK-YVGESERAVRQVFQRAAASS----PCVIFFDEFDALAP 673
Query: 131 RR---DHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
+R D Q R+ +QL T MD + K S V ++A+TNR D ID A+ R GR D
Sbjct: 674 KRGGGDGGGNQATERVVNQLLTEMDGLE--KRS--EVFIIAATNRPDIIDAAMCRPGRLD 729
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATS--CNGYVGADLEALCREATMSA 244
R EILK T K+P+ +VDL + T C+ + GADL L +EA A
Sbjct: 730 KMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHA 789
Query: 245 VKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+ R D N +VTMED+ A S + PS++R + K+ DI RD K
Sbjct: 790 ISRGFDNNSTEPD-TVTMEDFIFALSKIKPSVSRKDELMYDKLN-NDINKSRDKK 842
Score = 311 (114.5 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 65/175 (37%), Positives = 95/175 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + M D++ A V P+ R IP VTW+D+G L ++++L ++ PI++ +
Sbjct: 534 LYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYK 593
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+GI G L++GPPGC G EL + YVGESE +R FQ
Sbjct: 594 NMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQ 653
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ-AKVII 431
RA ++P +IFFDE D + KRGG ER+++ LLTEMDGLE+ ++V I
Sbjct: 654 RAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFI 708
Score = 234 (87.4 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 53/133 (39%), Positives = 77/133 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + + +RE I +P+ + LG++ PRG+LL+GP G GKT L +A+ E
Sbjct: 218 LGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVP 277
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQD 139
L IS + GESE +R FS A + A P ++FIDEIDA+ P+R+ ++ +
Sbjct: 278 LFAISATEITSGVSGESEARVRTLFSNAIAQA----PCIIFIDEIDAIAPKRESASKDME 333
Query: 140 VRIASQLFTLMDS 152
RI SQL T MDS
Sbjct: 334 RRIVSQLLTCMDS 346
Score = 228 (85.3 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 51/141 (36%), Positives = 70/141 (49%)
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
IP + + ++GG+ + +++ +E+PI H +S LG+ P RG LLHGP GC
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
E+ S GESEA +R F A AP IIF DE D + KR
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR---E 326
Query: 404 STSITVGERLLSTLLTEMDGL 424
S S + R++S LLT MD L
Sbjct: 327 SASKDMERRIVSQLLTCMDSL 347
Score = 189 (71.6 bits), Expect = 4.8e-66, Sum P(3) = 4.8e-66
Identities = 47/128 (36%), Positives = 70/128 (54%)
Query: 132 RDHRREQDV-RIASQLFTLM----DSNKPSKTSVP--HVVVVASTNRVDAIDPALRRSGR 184
+ +++QD+ + SQ T ++NK K HV+V+ +TNR +++D ALR GR
Sbjct: 365 QQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGR 424
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
FD R +ILK+ T K+ L+ N D E IAT GYVGAD+ L +EA ++
Sbjct: 425 FDKEICLGIPDQTARCKILKVITSKMRLENNFDYEEIATLTPGYVGADINLLVKEAATNS 484
Query: 245 VKRSSDAN 252
V R +N
Sbjct: 485 VNRIFTSN 492
Score = 37 (18.1 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 7/45 (15%), Positives = 23/45 (51%)
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
++ ++++L + +P K + ++ ++ + + PA +R G
Sbjct: 512 NIGLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREG 556
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 403 (146.9 bits), Expect = 5.3e-66, Sum P(2) = 5.3e-66
Identities = 98/230 (42%), Positives = 132/230 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E GG+ +E + +L+ + + Q+LG+ PRG LL+GPPG GKT L +AV E
Sbjct: 227 EDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETA 285
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-RE 137
L IS + GESE+ LRE F QA S A P ++FIDEIDA+ P+R+ ++
Sbjct: 286 LPLLKISAPELVSGVSGESEQKLRELFEQAISSA----PCILFIDEIDAITPKRETASKD 341
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ RI +QL T MD S V+V+ +TNR D++DPALRR+GRFD
Sbjct: 342 MERRIVAQLLTCMDDLN-SMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEG 400
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R +ILK +K+ L + D +A GYVGADL ALCREA M+AV R
Sbjct: 401 ARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNR 450
Score = 377 (137.8 bits), Expect = 7.1e-34, P = 7.1e-34
Identities = 101/268 (37%), Positives = 138/268 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+G + E L I P+ Q + LGL P GLLL GPPG GKT L +AV G +
Sbjct: 522 VGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLN 581
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQD 139
+ + +VGESE+A+R+ F + + A P V+F DEIDALCPRR +H
Sbjct: 582 FISVKGPELLNMYVGESERAVRQVFQRGRNSA----PCVIFFDEIDALCPRRSEHESGAS 637
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
VR+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 638 VRVVNQLLTEMDGMENRR----QVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADR 693
Query: 200 FEILKLYTK---KVPLDANVDLEAIA--TSCNGYVGADLEALCREATMSAVKRSSDA--- 251
IL TK K LD++V LE IA C + GADL AL REA ++A++ D
Sbjct: 694 HAILNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVHLDPAQT 753
Query: 252 -NECAGVLSVTMEDWRHARSVVGPSITR 278
E A + V+ + A V PS+++
Sbjct: 754 HTESAKDIRVSRVHFEDAFKKVRPSVSK 781
Score = 303 (111.7 bits), Expect = 5.3e-66, Sum P(2) = 5.3e-66
Identities = 73/198 (36%), Positives = 101/198 (51%)
Query: 235 ALCR--EATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDI 292
AL R + S+V S D L V M D+ + V PS R +P VTW D+
Sbjct: 466 ALARLLDLLKSSVSLSEDQ---LAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADV 522
Query: 293 GGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXX 352
G L+D++++L A+ PI++ F LG+S G LL GPPGC
Sbjct: 523 GALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNF 582
Query: 353 XXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGER 412
G EL +MYVGESE +R FQR R +AP +IFFDE D + +R S + R
Sbjct: 583 ISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGASV---R 639
Query: 413 LLSTLLTEMDGLEQAKVI 430
+++ LLTEMDG+E + +
Sbjct: 640 VVNQLLTEMDGMENRRQV 657
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 53/161 (32%), Positives = 80/161 (49%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPG 334
S +G ++ V +ED GG + +++ + + ++H + RLG+ P RG LLHGPPG
Sbjct: 212 SKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFLLHGPPG 270
Query: 335 CXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADV 394
C EL S GESE LR F++A +AP I+F DE D
Sbjct: 271 CGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDA 330
Query: 395 VGAKRGGSSSTSITVGERLLSTLLTEMDGL----EQAKVII 431
+ KR + S + R+++ LLT MD L E A+V++
Sbjct: 331 ITPKR---ETASKDMERRIVAQLLTCMDDLNSMLEPAQVLV 368
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 403 (146.9 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 96/232 (41%), Positives = 132/232 (56%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
++GG + L E+I P+L+ G++ PRG+LLYGPPG GKT++ A+ E
Sbjct: 194 SLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKV 253
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH--RRE 137
IS SV GESEK LRE F +A A P ++F+DEIDA+ P+RD +RE
Sbjct: 254 PFINISAPSVVSGMSGESEKKLREIFEEAKQIA----PCLIFMDEIDAITPKRDGGAQRE 309
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ RI +QL TLMD KT VVV+ +TNR D++D ALRR+GRFD
Sbjct: 310 MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEE 369
Query: 198 XRFEILKLYTKKVPLD--ANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ILK TK + L+ + + ++ GYVGADL++L A +SA+KR
Sbjct: 370 QRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKR 421
Score = 361 (132.1 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 96/252 (38%), Positives = 139/252 (55%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAF 105
K+G+ P G+L++GPPG GKT L +AV E A+ +++ P ++K +VGESEKA+R+ F
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGESEKAVRQVF 608
Query: 106 SQASSHALSGKPSVVFIDEIDALCPRRD-HRREQDVRIASQLFTLMDSNKPSKTSVPHVV 164
+A + P ++F DE+DAL PRRD E R+ + L T +D K V
Sbjct: 609 QRARAST----PCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKG----VF 660
Query: 165 VVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK--LYTKKVPLDANVDLEAIA 222
V+ +TNR D IDPA+ R GR D R EILK + T PL ANVDL AI+
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 223 --TSCNGYVGADLEALCREATMSAVKRSSDANE------CAGV---------LSVTMEDW 265
+ C + GADL +L +EA + A+K+ N+ +G +S+T ED+
Sbjct: 721 RDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDF 780
Query: 266 RHARSVVGPSIT 277
HA S + PS++
Sbjct: 781 DHALSSIRPSVS 792
Score = 295 (108.9 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 65/171 (38%), Positives = 91/171 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++T +D+ +A V PS R IP VTW+++G L ++ +L + PIK +
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYL 549
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
++GI+ G L+ GPPGC G EL + YVGESE +R FQ
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQ 609
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
RAR + P IIFFDE D + +R S S S R+++TLLTE+DGL K
Sbjct: 610 RARASTPCIIFFDELDALVPRRDTSMSES---SSRVVNTLLTELDGLNDRK 657
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 278 RGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXX 337
R + P + +GG+ + +L + + PI H +S G+ P RG LL+GPPGC
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 338 XXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGA 397
+ S GESE LR F+ A+ AP +IF DE D +
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
KR G + + +R+++ LLT MD L K P+ I
Sbjct: 301 KRDGGAQREME--KRIVAQLLTLMDELTLEKTGGKPVVVI 338
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 403 (146.9 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 96/232 (41%), Positives = 132/232 (56%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
++GG + L E+I P+L+ G++ PRG+LLYGPPG GKT++ A+ E
Sbjct: 194 SLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKV 253
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH--RRE 137
IS SV GESEK LRE F +A A P ++F+DEIDA+ P+RD +RE
Sbjct: 254 PFINISAPSVVSGMSGESEKKLREIFEEAKQIA----PCLIFMDEIDAITPKRDGGAQRE 309
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+ RI +QL TLMD KT VVV+ +TNR D++D ALRR+GRFD
Sbjct: 310 MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEE 369
Query: 198 XRFEILKLYTKKVPLD--ANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ILK TK + L+ + + ++ GYVGADL++L A +SA+KR
Sbjct: 370 QRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIKR 421
Score = 361 (132.1 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 96/252 (38%), Positives = 139/252 (55%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAF 105
K+G+ P G+L++GPPG GKT L +AV E A+ +++ P ++K +VGESEKA+R+ F
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK-YVGESEKAVRQVF 608
Query: 106 SQASSHALSGKPSVVFIDEIDALCPRRD-HRREQDVRIASQLFTLMDSNKPSKTSVPHVV 164
+A + P ++F DE+DAL PRRD E R+ + L T +D K V
Sbjct: 609 QRARAST----PCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKG----VF 660
Query: 165 VVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK--LYTKKVPLDANVDLEAIA 222
V+ +TNR D IDPA+ R GR D R EILK + T PL ANVDL AI+
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 223 --TSCNGYVGADLEALCREATMSAVKRSSDANE------CAGV---------LSVTMEDW 265
+ C + GADL +L +EA + A+K+ N+ +G +S+T ED+
Sbjct: 721 RDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDF 780
Query: 266 RHARSVVGPSIT 277
HA S + PS++
Sbjct: 781 DHALSSIRPSVS 792
Score = 295 (108.9 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 65/171 (38%), Positives = 91/171 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++T +D+ +A V PS R IP VTW+++G L ++ +L + PIK +
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYL 549
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
++GI+ G L+ GPPGC G EL + YVGESE +R FQ
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQ 609
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
RAR + P IIFFDE D + +R S S S R+++TLLTE+DGL K
Sbjct: 610 RARASTPCIIFFDELDALVPRRDTSMSES---SSRVVNTLLTELDGLNDRK 657
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 278 RGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXX 337
R + P + +GG+ + +L + + PI H +S G+ P RG LL+GPPGC
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 338 XXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGA 397
+ S GESE LR F+ A+ AP +IF DE D +
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
KR G + + +R+++ LLT MD L K P+ I
Sbjct: 301 KRDGGAQREME--KRIVAQLLTLMDELTLEKTGGKPVVVI 338
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 401 (146.2 bits), Expect = 7.4e-65, Sum P(2) = 7.4e-65
Identities = 97/239 (40%), Positives = 136/239 (56%)
Query: 22 GGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
GG + ++ L + FP+L +K+G+K P G+L +GPPG GKT L A+ E G
Sbjct: 236 GGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPF 295
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQDV 140
IS V G SE+ +RE FS+A A PS+VFIDEIDA+ +R+++ RE +
Sbjct: 296 YKISATEVISGVSGASEENIRELFSKAYRTA----PSIVFIDEIDAIGSKRENQQREMEK 351
Query: 141 RIASQLFTLMDS--NKPSK----TSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
RI +QL T MD NK K +S V+V+ +TNR DA+DPALRRSGRF+
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R EIL + +K+ L+ D + IA G+VGADLE++ A A+KR D+ +
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRK 470
Score = 323 (118.8 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 93/276 (33%), Positives = 139/276 (50%)
Query: 14 KWKAEEAIGG-NRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRA 72
KW + +GG + ++ R ++ P+ + G+ G LLYGPPG GKT + +A
Sbjct: 526 KW---DDVGGLDHLRLQFNRYIVR-PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKA 581
Query: 73 VVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
E GA+ I + +VGESE A+R F +A + A P V+F DE+DAL R
Sbjct: 582 AANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCA----PCVIFFDEVDALTTSR 637
Query: 133 DHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
V R+ +Q +D + +V V+ +TNR D +DPA R GRF
Sbjct: 638 GKEGAWVVERLLNQFLVELDGGERR-----NVYVIGATNRPDVVDPAFLRPGRFGNLLYV 692
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIA-TSCNGYVGADLEALCREATMSAVKR--- 247
R ILK +K P+D +VDL+ IA +C G+ GADL L ++AT AV+
Sbjct: 693 PLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIG 752
Query: 248 SSDANE--CAGVLSVTMEDWRH---ARSVVGPSITR 278
SS+++E + T++ RH A S+V PS+ +
Sbjct: 753 SSESSEDDVTDITQCTIKT-RHFEQALSLVSPSVNK 787
Score = 295 (108.9 bits), Expect = 7.4e-65, Sum P(2) = 7.4e-65
Identities = 66/175 (37%), Positives = 92/175 (52%)
Query: 258 LSVTMEDWRHARSVVGPSITR-GVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
L V M D+ A ++V S+TR G ++ +P V W+D+GGL L+ + + + PIK +
Sbjct: 496 LFVKMSDFEEAVNLVQASLTREGFSI-VPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIY 554
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
G+ G LL+GPPGC GAEL + YVGESE +R F
Sbjct: 555 KAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLF 614
Query: 377 QRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
QRAR AP +IFFDE D + RG + + ERLL+ L E+DG E+ V +
Sbjct: 615 QRARTCAPCVIFFDEVDALTTSRGKEGAWVV---ERLLNQFLVELDGGERRNVYV 666
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 45/136 (33%), Positives = 68/136 (50%)
Query: 288 TWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXX 347
T++D GG++ + +L+ V +PI + F ++G+ P G L HGPPGC
Sbjct: 231 TFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANE 290
Query: 348 XXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSI 407
E+ S G SE +R F +A APSI+F DE D +G+KR
Sbjct: 291 AGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQRE-- 348
Query: 408 TVGERLLSTLLTEMDG 423
+ +R+++ LLT MDG
Sbjct: 349 -MEKRIVTQLLTCMDG 363
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 403 (146.9 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 94/228 (41%), Positives = 127/228 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L EL+ P+ + Q G+ PRG+LL+GPPG GKT L A+ E G
Sbjct: 176 IGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVP 235
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RREQD 139
IS S+ GESEK +RE F +A S A P ++FIDEIDA+ P+R+ +RE +
Sbjct: 236 FISISAPSIVSGMSGESEKKVREVFEEAKSLA----PCLMFIDEIDAVTPKRESAQREME 291
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI +Q T MD KT V+V+ +TNR D++D ALRR+GRFD R
Sbjct: 292 RRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAR 351
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
+IL+ K + L + D +A GYVGADL+AL A + A+KR
Sbjct: 352 EKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR 399
Score = 355 (130.0 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 91/245 (37%), Positives = 136/245 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IG ++ L+ I P+ Q +G+ P G+LL+GPPG GKT L +AV E A+
Sbjct: 494 IGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKAN 553
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQ 138
+++ P ++K +VGESE+A+R+ F +A + + P V+F DE+DA+ PRRD E
Sbjct: 554 FISIRGPELLNK-YVGESERAVRQVFLRARASS----PCVIFFDELDAMVPRRDDSLSEA 608
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ + L T +D S S V V+A+TNR D IDPA+ R GR D
Sbjct: 609 SSRVVNTLLTELDGL--SDRS--GVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHE 664
Query: 199 RFEILKLYTKKVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANECAG 256
R EILK TK+ PL V+L+ + C+ + GADL AL REA ++A++ + A+ +
Sbjct: 665 RVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASN 724
Query: 257 VLSVT 261
+T
Sbjct: 725 EPEIT 729
Score = 286 (105.7 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 63/167 (37%), Positives = 90/167 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ +D+ A + V PS R +P V+W +IG L+ ++ +LQ A+ PIK +
Sbjct: 460 LAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQ 519
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
+GIS G LL GPPGC G EL + YVGESE +R F
Sbjct: 520 SVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFL 579
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
RAR ++P +IFFDE D + +R S S + R+++TLLTE+DGL
Sbjct: 580 RARASSPCVIFFDELDAMVPRRDDSLSEA---SSRVVNTLLTELDGL 623
Score = 209 (78.6 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 52/151 (34%), Positives = 68/151 (45%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
++ DIGGL D +L + V PIKH + GI P RG LLHGPPGC
Sbjct: 171 ISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALAN 230
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ S GESE +R F+ A+ AP ++F DE D V KR S
Sbjct: 231 ELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR---ESAQ 287
Query: 407 ITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
+ R+++ LT MD L K P+ I
Sbjct: 288 REMERRIVAQFLTCMDELSFEKTDGKPVLVI 318
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 398 (145.2 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 94/231 (40%), Positives = 130/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG V L ELI P+L+ G++ PRG+LL+GPPG GKTS+ A+ E
Sbjct: 205 KSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQ 264
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH--RR 136
IS SV GESEK +R+ F +A S A P +VF DEIDA+ P+RD +R
Sbjct: 265 VPFISISAPSVVSGMSGESEKKIRDLFDEARSLA----PCLVFFDEIDAITPKRDGGAQR 320
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E + RI +QL T MD KT+ V+++ +TNR D++D ALRR+GRFD
Sbjct: 321 EMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNE 380
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ILK + + +D +D +A G+VGADL+AL A A+KR
Sbjct: 381 VSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKR 431
Score = 351 (128.6 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 102/306 (33%), Positives = 157/306 (51%)
Query: 25 RAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH-LTV 83
R +E L I P+ +K+G+ P G+LL+GPPG GKT L +AV E A+ +++
Sbjct: 540 RVRLE-LNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISI 598
Query: 84 ISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQDVRI 142
P ++K +VGESE+++R+ F++A + P V+F DE+DAL PRRD E R+
Sbjct: 599 KGPELLNK-YVGESERSIRQVFTRARASV----PCVIFFDELDALVPRRDTSLSESSSRV 653
Query: 143 ASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEI 202
+ L T +D + + V+ +TNR D IDPA+ R GR D + +I
Sbjct: 654 VNTLLTELDGLNDRRG----IFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDI 709
Query: 203 LKLYTKK--VPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSS-DANECAGV 257
+K TK PL ++VD E I + CN + GADL AL RE+++ A+KR + E V
Sbjct: 710 IKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSV 769
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDI-GGLRDLKKKLQQAVEWPIKHSTAF 316
L ++ SV GV+ E VT D LR +K + +K+
Sbjct: 770 LDNDLDKEFEDLSV-------GVSGEEIIVTMSDFRSALRKIKPSVSDKDR--LKYDRLN 820
Query: 317 SRLGIS 322
++G++
Sbjct: 821 KKMGLT 826
Score = 293 (108.2 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 65/180 (36%), Positives = 93/180 (51%)
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
+ E +LS+ ED+ A + P+ R +P VTW ++G L+ ++ +L A+ PI
Sbjct: 494 SGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPI 553
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
K + ++GIS G LL GPPGC G EL + YVGESE
Sbjct: 554 KRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESER 613
Query: 371 LLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+R F RAR + P +IFFDE D + +R S S S R+++TLLTE+DGL + I
Sbjct: 614 SIRQVFTRARASVPCVIFFDELDALVPRRDTSLSES---SSRVVNTLLTELDGLNDRRGI 670
Score = 226 (84.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 78/299 (26%), Positives = 121/299 (40%)
Query: 143 ASQLFTLMDSNKPSKTSVPHVVVVASTNRV--DAIDPALRRSGRFDXXXXXXXXXXXXRF 200
A ++FT + S V VV+ + +R+ D I+ L G +
Sbjct: 70 AGEIFTFCLTKDLSLQRVKKVVLQKTIDRMLKDVIESELEEFGSYPGYNNEEEEKPSLEE 129
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCR--EATMSAVKRSSDANECAGVL 258
E+ K + D N ++ TS G+ E++ + VK+S ++ G
Sbjct: 130 ELAKK-NMMIERDTN-EMNKRITSTWSKSGSVSESITETDDPKTEEVKKSKKRSK-EGTC 186
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSR 318
V + + RS P P + + +GG+ D+ +L + + PI H F
Sbjct: 187 KVKRQKIKEDRS---P----------PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLS 233
Query: 319 LGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQR 378
G+ P RG LLHGPPGC + S GESE +R+ F
Sbjct: 234 TGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDE 293
Query: 379 ARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
AR AP ++FFDE D + KR G + + R+++ LLT MD L K P+ I
Sbjct: 294 ARSLAPCLVFFDEIDAITPKRDGGAQREME--RRIVAQLLTSMDELTMEKTNGKPVIII 350
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 387 (141.3 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 97/231 (41%), Positives = 132/231 (57%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 585 ALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 644
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 645 SVKGPELLNMYVGESERAVRQVFQRARNSA----PCVIFFDEVDALCPRRSDRESGASVR 700
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 701 VVNQLLTEMDGLENRQ----QVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLA 756
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKR 247
ILK TK + PLD +V+LE IA S C+ Y GADL AL REA++ A+++
Sbjct: 757 ILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQ 807
Score = 374 (136.7 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 94/249 (37%), Positives = 140/249 (56%)
Query: 4 KGRIMSEHNEKWKAE---EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYG 60
KG++ S+ E + E +GGN ++ + +++ + + LG+ PRG LL+G
Sbjct: 242 KGKVKSKGPELYHPSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHG 300
Query: 61 PPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PPG GKT L +A+ E + ++ + GESE+ LRE F QA +A P V+
Sbjct: 301 PPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNA----PCVL 356
Query: 121 FIDEIDALCPRRD-HRREQDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPA 178
FIDEIDA+ P+R+ ++ + RI +QL T +D N + T+ V+V+ +TNR D++DPA
Sbjct: 357 FIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATA--QVLVIGATNRPDSLDPA 414
Query: 179 LRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCR 238
LRR+GRFD R +IL+ +K+ L + D +A GYVGADL ALCR
Sbjct: 415 LRRAGRFDREICLGIPDEAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCR 474
Query: 239 EATMSAVKR 247
EA M V R
Sbjct: 475 EAAMCTVNR 483
Score = 312 (114.9 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 70/173 (40%), Positives = 94/173 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + M D+ A S V PS R V IP VTW DIG L D++++L A+ P+++ F
Sbjct: 549 LCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFK 608
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG++ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 609 ALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 668
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
RAR +AP +IFFDE D + +R S + R+++ LLTEMDGLE + +
Sbjct: 669 RARNSAPCVIFFDEVDALCPRRSDRESGASV---RVVNQLLTEMDGLENRQQV 718
Score = 195 (73.7 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 48/148 (32%), Positives = 73/148 (49%)
Query: 277 TRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
++G + P V +ED+GG + K++ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 247 SKGPELYHPSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCG 305
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F +A L AP ++F DE D +
Sbjct: 306 KTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAIT 365
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT +D L
Sbjct: 366 PKREVASKD---MERRIVAQLLTCLDDL 390
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 400 (145.9 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 107/268 (39%), Positives = 147/268 (54%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 579 ALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 638
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A S A P V+F DE+DALCPRR R VR
Sbjct: 639 SVKGPELLNMYVGESERAVRQVFQRARSSA----PCVIFFDEVDALCPRRSDRETGASVR 694
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 695 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 750
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSS---DANE 253
ILK TK + PLDA+V+LEA+A C+ Y GADL AL REA++ A+++
Sbjct: 751 ILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGG 810
Query: 254 CAGVLSVTMEDWRHARSVVGPSITR-GV 280
G L V+ + + A V SI++ GV
Sbjct: 811 DRGELKVSQKHFEEAFKKVKSSISKKGV 838
Score = 378 (138.1 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 93/231 (40%), Positives = 131/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + LG PRG+LL+GPPG GKT L A+ E
Sbjct: 259 EDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELD 317
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ V GESE+ LRE F QA S+A P V+FIDEIDA+ P+R+ ++
Sbjct: 318 LPILKVAATEVVSGVSGESEQKLRELFEQAVSNA----PCVLFIDEIDAITPKREVASKD 373
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 374 MERRIVAQLLTCMDDLNTTAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 431
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L +A G+VGADL ALCREA M AV R
Sbjct: 432 ASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Score = 307 (113.1 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 73/181 (40%), Positives = 95/181 (52%)
Query: 247 RSSD--ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
RS D + E L + D+ A S V PS R V +P VTW DIG L D++++L
Sbjct: 530 RSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTM 589
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMY 364
A+ P++ F LG+ G LL GPPGC G EL +MY
Sbjct: 590 AILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 649
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
VGESE +R FQRAR +AP +IFFDE D + +R T +V R+++ LLTEMDGL
Sbjct: 650 VGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGL 706
Query: 425 E 425
E
Sbjct: 707 E 707
Score = 195 (73.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/148 (32%), Positives = 73/148 (49%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
+G+ +++ +V +ED+GG LK+ + + ++H + LG P RG LLHGPPGC
Sbjct: 247 KGLELQVSRVKFEDVGGNDATLKEVCKMLIH--MRHPEVYHHLGAVPPRGVLLHGPPGCG 304
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP ++F DE D +
Sbjct: 305 KTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAIT 364
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 365 PKREVASKD---MERRIVAQLLTCMDDL 389
Score = 39 (18.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 81 LTVISP-HSVHKAHVGESEKALREAFSQASSH 111
LT + H +A GE + E++S + S+
Sbjct: 75 LTALEDEHLAKRARQGEEDNEYTESYSDSDSN 106
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 399 (145.5 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 105/265 (39%), Positives = 145/265 (54%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A S A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRARSSA----PCVIFFDEVDALCPRRSDRETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSS---DANE 253
ILK TK + PLDA+V+LEA+A C+ Y GADL AL REA++ A+++
Sbjct: 756 ILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRPKGGG 815
Query: 254 CAGVLSVTMEDWRHARSVVGPSITR 278
G L V+ + + A V SI++
Sbjct: 816 DRGELKVSQKHFEEAFKKVKSSISK 840
Score = 378 (138.1 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 93/231 (40%), Positives = 131/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + LG PRG+LL+GPPG GKT L A+ E
Sbjct: 259 EDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELD 317
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ V GESE+ LRE F QA S+A P V+FIDEIDA+ P+R+ ++
Sbjct: 318 LPILKVAATEVVSGVSGESEQKLRELFEQAVSNA----PCVLFIDEIDAITPKREVASKD 373
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 374 MERRIVAQLLTCMDDLNTTAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 431
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L +A G+VGADL ALCREA M AV R
Sbjct: 432 ASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Score = 307 (113.1 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 73/181 (40%), Positives = 95/181 (52%)
Query: 247 RSSD--ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
RS D + E L + D+ A S V PS R V +P VTW DIG L D++++L
Sbjct: 535 RSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPSVTWADIGALEDIREELTM 594
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMY 364
A+ P++ F LG+ G LL GPPGC G EL +MY
Sbjct: 595 AILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMY 654
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
VGESE +R FQRAR +AP +IFFDE D + +R T +V R+++ LLTEMDGL
Sbjct: 655 VGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGL 711
Query: 425 E 425
E
Sbjct: 712 E 712
Score = 195 (73.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/148 (32%), Positives = 73/148 (49%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
+G+ +++ +V +ED+GG LK+ + + ++H + LG P RG LLHGPPGC
Sbjct: 247 KGLELQVSRVKFEDVGGNDATLKEVCKMLIH--MRHPEVYHHLGAVPPRGVLLHGPPGCG 304
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP ++F DE D +
Sbjct: 305 KTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAIT 364
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 365 PKREVASKD---MERRIVAQLLTCMDDL 389
Score = 39 (18.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 81 LTVISP-HSVHKAHVGESEKALREAFSQASSH 111
LT + H +A GE + E++S + S+
Sbjct: 75 LTALEDEHLAKRARQGEEDNEYTESYSDSDSN 106
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 410 (149.4 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 109/266 (40%), Positives = 147/266 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 468 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 527
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 528 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 583
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 584 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 639
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R N
Sbjct: 640 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGN 699
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L V+ + + A V SI++
Sbjct: 700 E-KGELKVSHKHFEEAFKKVRSSISK 724
Score = 376 (137.4 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 148 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 206
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 207 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 262
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 263 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 320
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 321 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 371
Score = 305 (112.4 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 68/168 (40%), Positives = 92/168 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 432 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 491
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 492 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 551
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE
Sbjct: 552 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLE 596
Score = 202 (76.2 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 52/148 (35%), Positives = 72/148 (48%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
RG+ +I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 136 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH--MRHPEVYHHLGVVPPRGVLLHGPPGCG 193
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP IIF DE D +
Sbjct: 194 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAIT 253
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 254 PKREVASKD---MERRIVAQLLTCMDDL 278
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 392 (143.0 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 93/231 (40%), Positives = 130/231 (56%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG V+ L +L+ P+ ++ PRG+LL+GPPG GKT + A E G
Sbjct: 167 LGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGVP 226
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RREQD 139
IS S+ GESEKALRE F +A A P ++FIDEIDA+ P+R++ +RE +
Sbjct: 227 FISISAPSIVSGMSGESEKALREHFEEAKRLA----PCLIFIDEIDAITPKRENSQREME 282
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
RI +QL T MD KT V+V+A+TNR D++D ALRR GRFD R
Sbjct: 283 KRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVR 342
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
+IL+ T+K+ L ++D + +A G+VGADL L A +A+KR D
Sbjct: 343 EQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLD 393
Score = 383 (139.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 98/266 (36%), Positives = 147/266 (55%)
Query: 15 WKAEEAIGGNRAAVE-ALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAV 73
W A+ G R + A+ + I P LY+S +G+ P G+LL+GPPG GKT L +AV
Sbjct: 468 WADIGALSGIRDELATAIVDPIKHPELYAS----VGITAPTGVLLWGPPGCGKTLLAKAV 523
Query: 74 VRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
E A+ ++V P ++K +VGESE+A+R+ F +A S P V+F DE+DAL PRR
Sbjct: 524 ANESRANFISVKGPELLNK-YVGESERAVRQVFVRARSSI----PCVIFFDELDALVPRR 578
Query: 133 DHR-REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
D E R+ + L T +D S+ + V+A+TNR D IDPA+ R GR +
Sbjct: 579 DDTLSEASARVVNTLLTELDGLGSSRQGI---YVIAATNRPDIIDPAMLRPGRLETLLFV 635
Query: 192 XXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R EIL+ +++P++ N DL +A C G+ GADL +L R A +A+KR
Sbjct: 636 NLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRRD-- 693
Query: 252 NECAGVLSVTMEDWRHARSVVGPSIT 277
++ +D+ A+S + PS+T
Sbjct: 694 -------TIKFDDFVAAKSFIRPSVT 712
Score = 286 (105.7 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 67/181 (37%), Positives = 95/181 (52%)
Query: 255 AGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHST 314
A V+ V+ +D+ A + PS R IP TW DIG L ++ +L A+ PIKH
Sbjct: 434 AEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPE 493
Query: 315 AFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRN 374
++ +GI+ G LL GPPGC G EL + YVGESE +R
Sbjct: 494 LYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQ 553
Query: 375 TFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVIIYPI 434
F RAR + P +IFFDE D + +R + S + R+++TLLTE+DGL ++ IY I
Sbjct: 554 VFVRARSSIPCVIFFDELDALVPRRDDTLSEA---SARVVNTLLTELDGLGSSRQGIYVI 610
Query: 435 S 435
+
Sbjct: 611 A 611
Score = 191 (72.3 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 48/148 (32%), Positives = 67/148 (45%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V+ D+GGL D+ ++L V P+ + + P RG LLHGPPGC
Sbjct: 162 VSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAA 221
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ S GESE LR F+ A+ AP +IF DE D + KR S
Sbjct: 222 ELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQRE- 280
Query: 407 ITVGERLLSTLLTEMDGLEQAKVIIYPI 434
+ +R+++ LLT MD L K P+
Sbjct: 281 --MEKRIVAQLLTCMDDLALEKTDGKPV 306
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 407 (148.3 bits), Expect = 5.0e-37, P = 5.0e-37
Identities = 109/264 (41%), Positives = 146/264 (55%)
Query: 27 AVEALR-ELITF---PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +R ELI P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLETRQ----QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANEC-- 254
ILK TK K PLD +V+LE IA CN Y GADL AL REA++ A+++ A +
Sbjct: 756 ILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGV 815
Query: 255 -AGVLSVTMEDWRHARSVVGPSIT 277
AG L V+ + + A V PSI+
Sbjct: 816 GAGELKVSHKHFEDAFKKVKPSIS 839
Score = 384 (140.2 bits), Expect = 3.2e-63, Sum P(2) = 3.2e-63
Identities = 93/231 (40%), Positives = 134/231 (58%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + Q LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P +VFIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAAPEIVSGVSGESEQKLRELFDQAVSNA----PCIVFIDEIDAITPKREVASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDE 436
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L + +A G+VGADL ALCREA M AV R
Sbjct: 437 AARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 298 (110.0 bits), Expect = 3.2e-63, Sum P(2) = 3.2e-63
Identities = 67/168 (39%), Positives = 91/168 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A + V PS R V +P VTW DIG L D++ +L A+ P+++ F
Sbjct: 548 LCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFR 607
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 608 TLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLE 712
Score = 195 (73.7 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 50/148 (33%), Positives = 70/148 (47%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
R ++I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH--MRHPEVYQHLGVVPPRGVLLHGPPGCG 309
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F +A AP I+F DE D +
Sbjct: 310 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAIT 369
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 370 PKREVASKD---MERRIVAQLLTCMDDL 394
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 404 (147.3 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 107/264 (40%), Positives = 146/264 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLETRQ----QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANECA- 255
ILK TK K PLD +VDLEAIA C+ Y GADL AL REA++ A+++ +
Sbjct: 756 ILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEITGQKNGI 815
Query: 256 GV--LSVTMEDWRHARSVVGPSIT 277
G L+V+ + + A V PSI+
Sbjct: 816 GTAELTVSHKHFEEAFRKVKPSIS 839
Score = 381 (139.2 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 92/231 (39%), Positives = 134/231 (58%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + Q LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LR+ F QA S+A P +VFIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNA----PCIVFIDEIDAITPKREVASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+VV +TNR D++DPALRR+GRFD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDE 436
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L + +A G+VGADL ALCREA + AV R
Sbjct: 437 ASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHR 487
Score = 301 (111.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 67/168 (39%), Positives = 92/168 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW D+G L D++++L A+ P+++ F
Sbjct: 548 LCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQFR 607
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 608 ALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLE 712
Score = 193 (73.0 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 49/148 (33%), Positives = 71/148 (47%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
+ ++I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 252 KSTELQISSVKFEDVGGNDATLKEVCKMLIH--MRHPEVYQHLGVVPPRGVLLHGPPGCG 309
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR+ F +A AP I+F DE D +
Sbjct: 310 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAIT 369
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 370 PKREVASKD---MERRIVAQLLTCMDDL 394
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 410 (149.4 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 109/266 (40%), Positives = 147/266 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 585 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 644
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 645 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 700
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 701 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 756
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R N
Sbjct: 757 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGN 816
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L V+ + + A V SI++
Sbjct: 817 E-KGELKVSHKHFEEAFKKVRSSISK 841
Score = 376 (137.4 bits), Expect = 4.4e-63, Sum P(2) = 4.4e-63
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 265 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 323
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 324 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 379
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 380 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 437
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 438 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 488
Score = 305 (112.4 bits), Expect = 4.4e-63, Sum P(2) = 4.4e-63
Identities = 68/168 (40%), Positives = 92/168 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 549 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 608
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 609 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 668
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE
Sbjct: 669 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLE 713
Score = 202 (76.2 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 52/148 (35%), Positives = 72/148 (48%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
RG+ +I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH--MRHPEVYHHLGVVPPRGVLLHGPPGCG 310
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP IIF DE D +
Sbjct: 311 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAIT 370
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 371 PKREVASKD---MERRIVAQLLTCMDDL 395
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 411 (149.7 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 108/266 (40%), Positives = 148/266 (55%)
Query: 27 AVEALRELITFPLLY----SSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T +L+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 ALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 643
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 644 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSARETGASVR 699
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 700 VVNQLLTEMDGLETRQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 755
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A+K R +
Sbjct: 756 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQEMARQKSGS 815
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L ++ + + A V SI++
Sbjct: 816 E-KGELKISQKHFEEAFKKVKSSISK 840
Score = 372 (136.0 bits), Expect = 9.4e-61, Sum P(2) = 9.4e-61
Identities = 90/231 (38%), Positives = 130/231 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S A P ++FIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAATEIVSGVSGESEQKLRELFEQAVSSA----PCILFIDEIDAITPKREIASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 436
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L +A G+VGADL ALCREA M AV R
Sbjct: 437 ASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 287 (106.1 bits), Expect = 9.4e-61, Sum P(2) = 9.4e-61
Identities = 66/168 (39%), Positives = 91/168 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R +P VTW DIG L D++++L A+ + + + F
Sbjct: 548 LCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQFR 607
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 608 VLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
RA+ +AP +IFFDE D + +R + T +V R+++ LLTEMDGLE
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRRS-ARETGASV--RVVNQLLTEMDGLE 712
Score = 204 (76.9 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 56/180 (31%), Positives = 86/180 (47%)
Query: 246 KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGL-RDLKKKLQQ 304
K+ D E G + ++ + A++ +G+ ++I V +ED+GG LK+ +
Sbjct: 229 KKKEDLQEVDGEIEAVLQ--KRAKA-------KGLELQISSVKFEDVGGNDTTLKEVCKM 279
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMY 364
V ++H + LG+ P RG LLHGPPGC E+ S
Sbjct: 280 LVH--MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGV 337
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
GESE LR F++A +AP I+F DE D + KR +S + R+++ LLT MD L
Sbjct: 338 SGESEQKLRELFEQAVSSAPCILFIDEIDAITPKREIASKD---MERRIVAQLLTCMDDL 394
Score = 37 (18.1 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 87 HSVHKAHVGESEKALREAFSQASS 110
H +A GE + E++S SS
Sbjct: 82 HLAKRARHGEEDNEYTESYSDDSS 105
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 376 (137.4 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 91/231 (39%), Positives = 132/231 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 159 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 217
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 218 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 273
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD
Sbjct: 274 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 331
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 332 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 382
Score = 266 (98.7 bits), Expect = 3.0e-60, Sum P(2) = 3.0e-60
Identities = 56/142 (39%), Positives = 76/142 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 443 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 502
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 503 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 562
Query: 378 RARLAAPSIIFFDEADVVGAKR 399
RA+ +AP +IFFDE D + +R
Sbjct: 563 RAKNSAPCVIFFDEVDALCPRR 584
Score = 217 (81.4 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 49/113 (43%), Positives = 67/113 (59%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 479 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 538
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R
Sbjct: 539 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDR 587
Score = 202 (76.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 52/148 (35%), Positives = 72/148 (48%)
Query: 278 RGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCX 336
RG+ +I V +ED+GG LK+ + + ++H + LG+ P RG LLHGPPGC
Sbjct: 147 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH--MRHPEVYHHLGVVPPRGVLLHGPPGCG 204
Query: 337 XXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVG 396
E+ S GESE LR F++A AP IIF DE D +
Sbjct: 205 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAIT 264
Query: 397 AKRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 265 PKREVASKD---MERRIVAQLLTCMDDL 289
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 373 (136.4 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 96/263 (36%), Positives = 141/263 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IG E L+ + P+ Y ++LGL P G+LL GPPG GKT L +A+ E G +
Sbjct: 664 IGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGIN 723
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD- 139
+ + +VGESE+A+R F +A + A P V+F DE D+LCP+R + +
Sbjct: 724 FISVKGPELMNMYVGESERAVRACFQRARNSA----PCVIFFDEFDSLCPKRSDGGDGNN 779
Query: 140 --VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
RI +QL T MD + K V ++A+TNR D IDPA+ R GR D
Sbjct: 780 SGTRIVNQLLTEMDGVEERKG----VYILAATNRPDIIDPAILRPGRLDTILYVGFPEQS 835
Query: 198 XRFEILKLYTK--KVPLDAN-VDLEAIATSCNGYVGADLEALCREATMSAVKRS-SDANE 253
R EILK TK K P+ A+ VDL+ IA GY GADL L ++A+M ++++S ++ +
Sbjct: 836 ERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQSLNNGDT 895
Query: 254 CAGVLSVTMEDWRHARSVVGPSI 276
L V + ++ A + PS+
Sbjct: 896 NLDDLCVRSQHFQEALQQLRPSV 918
Score = 330 (121.2 bits), Expect = 7.1e-59, Sum P(2) = 7.1e-59
Identities = 90/231 (38%), Positives = 127/231 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQ-KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
IGG + ++ L E++ + S + +LGL RGLLL+GPPG GKT L RA+ +
Sbjct: 253 IGGMDSTLKELCEMLIH--IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKM 310
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQ 138
L I + GESE+ +RE F QA ++ P V+FIDEIDA+ R ++
Sbjct: 311 PLMEIPATELIGGISGESEERIREVFDQAIGYS----PCVLFIDEIDAIGGNRQWASKDM 366
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ RI SQL + +D+ K ++ VVV+A+T R D +DP LRR GRFD
Sbjct: 367 ERRIVSQLISSLDNLKANEFG-QSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKE 425
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R EIL++ + + +D ++ + IA GYVGADL AL A AVKR S
Sbjct: 426 RREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRS 476
Score = 314 (115.6 bits), Expect = 7.1e-59, Sum P(2) = 7.1e-59
Identities = 73/182 (40%), Positives = 101/182 (55%)
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
+D N C +T+ D+ A V+ PS R + +P TW+DIG L ++++L+ AV
Sbjct: 626 ADPNFC-----LTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLA 680
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGES 368
P+K+ RLG++ G LL GPPGC G EL +MYVGES
Sbjct: 681 PVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGES 740
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQ 426
E +R FQRAR +AP +IFFDE D + KR GG + S G R+++ LLTEMDG+E+
Sbjct: 741 ERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNS---GTRIVNQLLTEMDGVEE 797
Query: 427 AK 428
K
Sbjct: 798 RK 799
Score = 187 (70.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 53/182 (29%), Positives = 81/182 (44%)
Query: 244 AVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQ 303
AV RS D G+ ++ R R + V+ P ++ DIGG+ K+L
Sbjct: 208 AVPRSKDHRNVPGLYQQLHQNQSRDRL---RKFKRDLEVQHPTESFRDIGGMDSTLKELC 264
Query: 304 QAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSM 363
+ + IK + +LG+ P RG LLHGPPGC EL
Sbjct: 265 EMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGG 323
Query: 364 YVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG 423
GESE +R F +A +P ++F DE D +G R +S + R++S L++ +D
Sbjct: 324 ISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASKD---MERRIVSQLISSLDN 380
Query: 424 LE 425
L+
Sbjct: 381 LK 382
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 142/415 (34%), Positives = 227/415 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAV--VRE-- 76
IGG ++ + E + + L + + GL+ RGLLLYG G GK+ ++ A+ V E
Sbjct: 274 IGGLDRQLQLVEESMEYALGF--RTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEER 331
Query: 77 CGAHLTVISPHS--VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH 134
H+ +I +S V+ +GE+E+ L F +A +H P+++ I+++ LCP++++
Sbjct: 332 SQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHY--PHPTLLLIEDVHNLCPKQEN 389
Query: 135 RREQDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
+ R++ +L+D + PS+ V+A+++++D + P++RR+GR D
Sbjct: 390 S-DLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGA 448
Query: 194 XXXXXRFEILKLYTKKVPLD-ANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDAN 252
R EI++ K V ++ ++E +A+ +GYVGADL L A + A N
Sbjct: 449 PSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQA-----QPN 503
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKH 312
+ M + A + + PS R V +E P V W DIGG +L+ +QQA+EWP+ H
Sbjct: 504 P------LQMPHLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLH 557
Query: 313 STAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALL 372
+ F RLGI P RG L+ GPPGC G EL+SM+VGESE +
Sbjct: 558 ADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAV 617
Query: 373 RNTFQRARLAAPSIIFFDEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLE 425
R F++AR AP+I+FFDE D +G +R G SS+ +V ER+L+ LLTE+DG+E
Sbjct: 618 REVFRKARQVAPAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVE 672
Score = 371 (135.7 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 94/269 (34%), Positives = 145/269 (53%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N +W IGG A+++ I +PLL++ + Q+LG+K PRG+L++GPPG KT + +
Sbjct: 531 NVQWSD---IGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAK 587
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ E + I + VGESE+A+RE F +A A P++VF DEIDA+
Sbjct: 588 ALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA----PAIVFFDEIDAIGGE 643
Query: 132 RDH----RREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRF 185
R V R+ +QL T +D + ++ +V +VA+TNR D ID AL R GR
Sbjct: 644 RSEGDGSSSGSSVKERVLTQLLTELDGVE----ALQNVTIVAATNRPDMIDKALLRPGRI 699
Query: 186 DXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
D R EILK+ + +P+ +VD+E + GY GA+++A+C EA + A+
Sbjct: 700 DRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRAL 759
Query: 246 KRSSDANECAGVLSVTMEDWRHARSVVGP 274
++S +A + V D+ HA V P
Sbjct: 760 EQSFEAED------VKWTDFEHALKAVPP 782
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 109/266 (40%), Positives = 147/266 (55%)
Query: 27 AVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT 82
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 309 ALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFI 368
Query: 83 VISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDVR 141
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R VR
Sbjct: 369 SVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASVR 424
Query: 142 IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFE 201
+ +QL T MD + + V ++A+TNR D IDPA+ R GR D R
Sbjct: 425 VVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLA 480
Query: 202 ILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDAN 252
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R N
Sbjct: 481 ILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGN 540
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITR 278
E G L V+ + + A V SI++
Sbjct: 541 E-KGELKVSHKHFEEAFKKVRSSISK 565
Score = 305 (112.4 bits), Expect = 5.6e-55, Sum P(2) = 5.6e-55
Identities = 68/168 (40%), Positives = 92/168 (54%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L + + D+ A S V PS R V +P VTW DIG L D++++L A+ P+++ F
Sbjct: 273 LCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFK 332
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LG+ G LL GPPGC G EL +MYVGESE +R FQ
Sbjct: 333 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 392
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
RA+ +AP +IFFDE D + +R T +V R+++ LLTEMDGLE
Sbjct: 393 RAKNSAPCVIFFDEVDALCPRRS-DRETGASV--RVVNQLLTEMDGLE 437
Score = 293 (108.2 bits), Expect = 5.6e-55, Sum P(2) = 5.6e-55
Identities = 78/205 (38%), Positives = 111/205 (54%)
Query: 46 QKLGLKWPRGLLL-YGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREA 104
Q LGL+ ++ Y G + + RE + ++ + GESE+ LRE
Sbjct: 14 QLLGLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQKLREL 73
Query: 105 FSQASSHALSGKPSVVFIDEIDALCPRRD-HRREQDVRIASQLFTLMDS-NKPSKTSVPH 162
F QA S+A P ++FIDEIDA+ P+R+ ++ + RI +QL T MD N + T+
Sbjct: 74 FEQAVSNA----PCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATA--R 127
Query: 163 VVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIA 222
V+V+ +TNR D++DPALRR+GRFD R IL+ +K+ L D +A
Sbjct: 128 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLA 187
Query: 223 TSCNGYVGADLEALCREATMSAVKR 247
G+VGADL ALCREA M AV R
Sbjct: 188 HLTPGFVGADLMALCREAAMCAVNR 212
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 288 (106.4 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 90/275 (32%), Positives = 134/275 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W A+ R +E I P+ + LG+K G+LL+GPPG GKT + +
Sbjct: 501 NTTWSEVGALQNVRKKLEYA---IVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAK 557
Query: 72 AVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
AV A+ +++ P ++K +VGESE +R+ FS+A S A P ++F DE+DAL P
Sbjct: 558 AVANASKANFISIKGPELLNK-YVGESEYNVRQLFSRAKSSA----PCILFFDELDALVP 612
Query: 131 RRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXX 189
RD R+ + L T +D + + V+ +TNR D+ID A+RR GR
Sbjct: 613 TRDFTMSGATSRVVNALLTELDGVGDRQG----IYVIGATNRPDSIDEAIRRPGRLGTDI 668
Query: 190 XXXXXXXXXRFEILK-LYTKKVP----LDA-NVDLEAIATS--CNGYVGADLEALCREAT 241
RF+IL+ +Y VP DA +E +A C + GADL L A+
Sbjct: 669 YVGLPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGADLRQLLTAAS 728
Query: 242 MSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSI 276
+ + R D +E ++ EDW A V PS+
Sbjct: 729 EACMIRVQD-DEAP---MISEEDWERALDEVKPSV 759
Score = 284 (105.0 bits), Expect = 3.0e-47, Sum P(3) = 3.0e-47
Identities = 75/216 (34%), Positives = 116/216 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG +EAL + + PL + ++G K +LL+GP GTGKT++VRA+
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RRE 137
+S S+ GESEK +REAF +A A P ++F+DE+D + + D ++
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLA----PCLLFLDEVDVVAGKMDGAQKA 312
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+VR++S++ +D + +VVV+A+TNR D+I+P +RR RF
Sbjct: 313 MEVRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQELEMSMPDEAA 370
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADL 233
R IL+ T+ L +VD A+A GYVGADL
Sbjct: 371 -RESILRTMTRNKRLSDDVDFTALARLTPGYVGADL 405
Score = 270 (100.1 bits), Expect = 3.0e-47, Sum P(3) = 3.0e-47
Identities = 58/167 (34%), Positives = 89/167 (53%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
+ +T + A + + P+ R +P TW ++G L++++KKL+ A+ PI+ F+
Sbjct: 473 ICITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFA 532
Query: 318 RLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQ 377
LGI P G LL GPPGC G EL + YVGESE +R F
Sbjct: 533 ALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFS 592
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
RA+ +AP I+FFDE D + R + S + + R+++ LLTE+DG+
Sbjct: 593 RAKSSAPCILFFDELDALVPTRDFTMSGATS---RVVNALLTELDGV 636
Score = 154 (59.3 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 36/118 (30%), Positives = 53/118 (44%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
PK+ ED+GG+ + + L++ + P++ ++R+G P LLHGP G
Sbjct: 194 PKL--EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRAL 251
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
L S GESE +R F A AP ++F DE DVV K G+
Sbjct: 252 ADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGA 309
Score = 37 (18.1 bits), Expect = 3.0e-47, Sum P(3) = 3.0e-47
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVE 29
+S R+++ E+ KA+E G + A+E
Sbjct: 62 DSIERVLTYRKEELKADEDGGDSDEALE 89
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 325 (119.5 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 90/262 (34%), Positives = 133/262 (50%)
Query: 26 AAVEALREL---ITFPLLYSSQAQKLGLKW-PRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
A VE ++L I +P+ + LG+ P+G+LL GPPG GKT L +AV E G +
Sbjct: 537 ALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNF 596
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD-V 140
+ + +VGESE+A+R F +A +P V+F DEIDAL P+R H
Sbjct: 597 ISVKGPELLNMYVGESERAVRTVFQRARD----SQPCVIFFDEIDALVPKRSHGESSGGA 652
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
R+ +QL T MD + + V ++ +TNR D +D A+ R GR D R
Sbjct: 653 RLVNQLLTEMDGVEGRQK----VFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRV 708
Query: 201 EILKLYTK---KVPLDANVDLEAIAT--SCNGYVGADLEALCREATMSAVKRSSDANECA 255
+IL+ TK + L ++D IA G+ GADL AL E+++ A++ N+
Sbjct: 709 DILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLEND-E 767
Query: 256 GVLSVTMEDWRHARSVVGPSIT 277
V V M +R A S + PS+T
Sbjct: 768 SVKGVGMRHFREAASRIRPSVT 789
Score = 322 (118.4 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 74/186 (39%), Positives = 105/186 (56%)
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
S +E G L ++ ED+ A S + P+ R +P V+W+DIG L +++K+L+ ++ +
Sbjct: 492 SALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILY 551
Query: 309 PIKHSTAFSRLGIS--PVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVG 366
PIK + F+ LGI P +G LL GPPGC G EL +MYVG
Sbjct: 552 PIKRADDFAALGIDCRP-QGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVG 610
Query: 367 ESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE- 425
ESE +R FQRAR + P +IFFDE D + KR S+ G RL++ LLTEMDG+E
Sbjct: 611 ESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSG---GARLVNQLLTEMDGVEG 667
Query: 426 QAKVII 431
+ KV +
Sbjct: 668 RQKVFL 673
Score = 174 (66.3 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 19 EAIGG-NRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E IGG +R +E R + L LG+ PRG +++GPPG GKT +AV E
Sbjct: 206 EHIGGADRQFLEVCR--LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
+ ++ + GE+E+ +R F A ++ P ++ +D+IDA+ PRR+ +R
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNS----PCILILDDIDAIAPRRETAQR 319
Query: 137 EQDVRIASQLFTLMD 151
E + R+ SQL + +D
Sbjct: 320 EMERRVVSQLCSSLD 334
Score = 153 (58.9 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 122 IDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+DE+ L PR ++Q + + + P+ V+V+ +T+R DA+D LRR
Sbjct: 333 LDEL-VLPPREKPLKDQ-LTFGDDGSVAIIGDSPTAAGAG-VLVIGTTSRPDAVDGGLRR 389
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
+GRF+ R +IL+ K V L +V L+ IA GYVGADL+AL REA
Sbjct: 390 AGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQALIREAA 448
Query: 242 MSAVKRSSD 250
A+ R D
Sbjct: 449 KVAIDRVFD 457
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 270 SVVGPSITRGV-----TVEIPK---VTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLG 320
S P++ RG+ T+ P+ V +E IGG R + + A+ +K F+ LG
Sbjct: 179 SAAPPALPRGLGAVSDTIS-PRESHVKFEHIGGADRQFLEVCRLAMH--LKRPKTFATLG 235
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ P RG ++HGPPGC EL S GE+E +R F A+
Sbjct: 236 VDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAK 295
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+P I+ D+ D + +R + + R++S L + +D L
Sbjct: 296 QNSPCILILDDIDAIAPRR---ETAQREMERRVVSQLCSSLDEL 336
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 325 (119.5 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 90/262 (34%), Positives = 133/262 (50%)
Query: 26 AAVEALREL---ITFPLLYSSQAQKLGLKW-PRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
A VE ++L I +P+ + LG+ P+G+LL GPPG GKT L +AV E G +
Sbjct: 537 ALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNF 596
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD-V 140
+ + +VGESE+A+R F +A +P V+F DEIDAL P+R H
Sbjct: 597 ISVKGPELLNMYVGESERAVRTVFQRARD----SQPCVIFFDEIDALVPKRSHGESSGGA 652
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
R+ +QL T MD + + V ++ +TNR D +D A+ R GR D R
Sbjct: 653 RLVNQLLTEMDGVEGRQK----VFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRV 708
Query: 201 EILKLYTK---KVPLDANVDLEAIAT--SCNGYVGADLEALCREATMSAVKRSSDANECA 255
+IL+ TK + L ++D IA G+ GADL AL E+++ A++ N+
Sbjct: 709 DILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARVLEND-E 767
Query: 256 GVLSVTMEDWRHARSVVGPSIT 277
V V M +R A S + PS+T
Sbjct: 768 SVKGVGMRHFREAASRIRPSVT 789
Score = 322 (118.4 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 74/186 (39%), Positives = 105/186 (56%)
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
S +E G L ++ ED+ A S + P+ R +P V+W+DIG L +++K+L+ ++ +
Sbjct: 492 SALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILY 551
Query: 309 PIKHSTAFSRLGIS--PVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVG 366
PIK + F+ LGI P +G LL GPPGC G EL +MYVG
Sbjct: 552 PIKRADDFAALGIDCRP-QGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVG 610
Query: 367 ESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE- 425
ESE +R FQRAR + P +IFFDE D + KR S+ G RL++ LLTEMDG+E
Sbjct: 611 ESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSG---GARLVNQLLTEMDGVEG 667
Query: 426 QAKVII 431
+ KV +
Sbjct: 668 RQKVFL 673
Score = 174 (66.3 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 44/135 (32%), Positives = 72/135 (53%)
Query: 19 EAIGG-NRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC 77
E IGG +R +E R + L LG+ PRG +++GPPG GKT +AV E
Sbjct: 206 EHIGGADRQFLEVCR--LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGEL 263
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RR 136
+ ++ + GE+E+ +R F A ++ P ++ +D+IDA+ PRR+ +R
Sbjct: 264 AIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNS----PCILILDDIDAIAPRRETAQR 319
Query: 137 EQDVRIASQLFTLMD 151
E + R+ SQL + +D
Sbjct: 320 EMERRVVSQLCSSLD 334
Score = 153 (58.9 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 122 IDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
+DE+ L PR ++Q + + + P+ V+V+ +T+R DA+D LRR
Sbjct: 333 LDEL-VLPPREKPLKDQ-LTFGDDGSVAIIGDSPTAAGAG-VLVIGTTSRPDAVDGGLRR 389
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
+GRF+ R +IL+ K V L +V L+ IA GYVGADL+AL REA
Sbjct: 390 AGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQALIREAA 448
Query: 242 MSAVKRSSD 250
A+ R D
Sbjct: 449 KVAIDRVFD 457
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 270 SVVGPSITRGV-----TVEIPK---VTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLG 320
S P++ RG+ T+ P+ V +E IGG R + + A+ +K F+ LG
Sbjct: 179 SAAPPALPRGLGAVSDTIS-PRESHVKFEHIGGADRQFLEVCRLAMH--LKRPKTFATLG 235
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ P RG ++HGPPGC EL S GE+E +R F A+
Sbjct: 236 VDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAK 295
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+P I+ D+ D + +R + + R++S L + +D L
Sbjct: 296 QNSPCILILDDIDAIAPRR---ETAQREMERRVVSQLCSSLDEL 336
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 453 (164.5 bits), Expect = 3.7e-43, Sum P(2) = 3.7e-43
Identities = 127/386 (32%), Positives = 192/386 (49%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ G EK L+ FS+A
Sbjct: 466 VLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRC---- 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+P V+ + +D L RD E D R+ + L L+ P TS P ++VVA+T++ +
Sbjct: 522 RPVVLLLTAVDLLGRNRDGLGE-DARVVATLCHLLQDEDPL-TSCPPLMVVATTSQAQDL 579
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
PA ++ F R +L+ T +PL V+L +A C G+V DL A
Sbjct: 580 -PADVQTA-FPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLARRCAGFVVGDLYA 637
Query: 236 LCREATMSA---VKRS------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV- 282
L ++ A +K S S+ +E CA + ED+ A + + ++ +
Sbjct: 638 LLTHSSRVACTRIKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAP 697
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+IP V+W D+GGL+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG +
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRN 815
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAK 428
+ V +R++S LL E+DGL +
Sbjct: 816 GDSG-GVMDRVVSQLLAELDGLHSTQ 840
Score = 330 (121.2 bits), Expect = 6.3e-30, Sum P(2) = 6.3e-30
Identities = 93/268 (34%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 707 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 764
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 765 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRNGDSG 819
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 820 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSED 875
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVRDLEE 935
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TM+D A + + PS++
Sbjct: 936 GLEPGSSTLLLTMDDLLQAAARLQPSVS 963
Score = 39 (18.8 bits), Expect = 3.7e-43, Sum P(2) = 3.7e-43
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 415 STLLTEMDGLEQAKVIIYP 433
STLL MD L QA + P
Sbjct: 942 STLLLTMDDLLQAAARLQP 960
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 139/433 (32%), Positives = 204/433 (47%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
SE + W + G A V L ++ P L A G +LL GPPG GKT+
Sbjct: 14 SEKSTLWSSLSP-PGLEALVSELCAVLK-PRLQPGGALLTGTS---SVLLRGPPGCGKTT 68
Query: 69 LVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL 128
+V A + G HL + S+ G E L+ FS+A +P+V+ + +D L
Sbjct: 69 VVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRC----RPAVLLLTAVDLL 124
Query: 129 CPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
RD E D R+ + L L+ P S P ++VVA+T+R + PA ++ F
Sbjct: 125 GRDRDGLGE-DARVVAALRHLLLDEDPLN-SCPPLMVVATTSRAQDL-PADVQTA-FPHE 180
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR- 247
R IL+ T +PL V+L +A C G+V DL AL ++ +A R
Sbjct: 181 LEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRI 240
Query: 248 ----------SSDANE-CAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGL 295
D E CA + ED+ A + + ++ V +IP V+W D+GGL
Sbjct: 241 KNLGLAGGLTEEDEGELCAAGFPLLAEDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGL 300
Query: 296 RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXX 355
+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 301 QEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSV 358
Query: 356 XGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLS 415
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S + V +R++S
Sbjct: 359 KGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG-GVMDRVVS 417
Query: 416 TLLTEMDGLEQAK 428
LL E+DGL +
Sbjct: 418 QLLAELDGLHSTQ 430
Score = 333 (122.3 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 94/268 (35%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 297 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 354
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 355 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 409
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 410 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 465
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 466 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEE 525
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 526 GLEPGSSALMLTMEDLLQAAARLQPSVS 553
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 402 (146.6 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 99/249 (39%), Positives = 139/249 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+G AA +AL E + +PL + +LG++ PRG+LLYGPPG GKT +VRA+
Sbjct: 466 VGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLS 525
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + + VG SEKA+RE F +A A PS+VF+DE+DAL PRR + V
Sbjct: 526 VHAVKGSELMDKWVGSSEKAVRELFRRARDSA----PSLVFLDELDALAPRRGQSFDSGV 581
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ + L T +D P + VV++ +TNR D IDPAL R GR +
Sbjct: 582 SDRVVAALLTELDGIDPLRD----VVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAA 637
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-NECAGV 257
R EIL+ K +PL ++VDL+ +A +GY AD AL REA ++A++RS DA N A
Sbjct: 638 RREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAAD 697
Query: 258 LSVTMEDWR 266
L+ E R
Sbjct: 698 LATARETVR 706
Score = 386 (140.9 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 101/322 (31%), Positives = 166/322 (51%)
Query: 112 ALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNR 171
A+ + V+ I + DAL P A + +L+ S + + VV++A++ R
Sbjct: 299 AVRHEGGVLLITDADALLPAA----------AEPVASLILSELRTAVATAGVVLIATSAR 348
Query: 172 VDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGA 231
D +D LR D R +L+ VP +++L+ IA+ G+V A
Sbjct: 349 PDQLDARLRSPELCDRELGLPLPDAATRKSLLEALLNPVPT-GDLNLDEIASRTPGFVVA 407
Query: 232 DLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP--KVTW 289
DL AL REA + A R+S A+ +L +D A +V+ P ++R + E+ VT
Sbjct: 408 DLAALVREAALRAASRAS-ADGRPPMLH--QDDLLGALTVIRP-LSRSASDEVTVGDVTL 463
Query: 290 EDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXX 349
+D+G + K+ L +AV WP++H F+RLG+ P RG LL+GPPGC
Sbjct: 464 DDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQ 523
Query: 350 XXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITV 409
G+EL +VG SE +R F+RAR +APS++F DE D + +RG S + ++
Sbjct: 524 LSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDSGVS- 582
Query: 410 GERLLSTLLTEMDGLEQAKVII 431
+R+++ LLTE+DG++ + ++
Sbjct: 583 -DRVVAALLTELDGIDPLRDVV 603
Score = 96 (38.9 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 36/113 (31%), Positives = 49/113 (43%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC- 77
E + G + L E + L Q LG G+L+ GP G GK +LVRAV C
Sbjct: 213 EELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAV---CD 269
Query: 78 GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
G L + + G+ KA+ A QA H + V+ I + DAL P
Sbjct: 270 GRRLVTLDGPEIGALAAGDRVKAVASAV-QAVRH----EGGVLLITDADALLP 317
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 456 (165.6 bits), Expect = 3.7e-42, P = 3.7e-42
Identities = 132/389 (33%), Positives = 193/389 (49%)
Query: 53 PRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHA 112
P +LL GPPG+GKT+ V A G HL + S+ G E L+ AFS+A
Sbjct: 452 PGSVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRC- 510
Query: 113 LSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRV 172
+P V+ + +D L RD E D R+ + L L+ P TS P ++VVA+T+R
Sbjct: 511 ---RPVVLLLTAVDLLGRDRDGLGE-DARVVATLRRLLLDEDPL-TSHPPLMVVATTSRA 565
Query: 173 DAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGAD 232
+ PA ++ F R IL+ T +PL V+L +A C G+V D
Sbjct: 566 QDL-PADVQTA-FPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQLARRCAGFVVGD 623
Query: 233 LEALCREATMSA---VKRS------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGV 280
L AL ++ +A +K S S+ +E CA + ED A + + ++ V
Sbjct: 624 LYALLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDLGQALEQLQSAHSQAV 683
Query: 281 TV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
+IP V+W D+GGL+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 684 GAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTL 741
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
G EL +MYVG+SE +R F RAR AAP IIFFDE D + R
Sbjct: 742 LAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR 801
Query: 400 GGSSSTSITVGERLLSTLLTEMDGLEQAK 428
G S + V +R++S LL E+DGL +
Sbjct: 802 GRSGDSG-GVMDRVVSQLLAELDGLHSTQ 829
Score = 337 (123.7 bits), Expect = 2.2e-29, P = 2.2e-29
Identities = 95/268 (35%), Positives = 141/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 696 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 753
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 754 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 808
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 809 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 864
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS----SD 250
+ +L T+K L+ +V L A+ C + GADL +LC +A +A+KR D
Sbjct: 865 RASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRVRDLED 924
Query: 251 ANEC-AGVLSVTMEDWRHARSVVGPSIT 277
E + L +TMED A + + PS++
Sbjct: 925 GLEPGSSALLLTMEDLLQAAARLQPSVS 952
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 454 (164.9 bits), Expect = 6.2e-42, P = 6.2e-42
Identities = 126/385 (32%), Positives = 189/385 (49%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S + + S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRTVETKLQTTFSRARRC 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P V+ + +D L RD E D R+ + L L+D + S+ P ++VVA+T+RV
Sbjct: 522 RPVVLLLTALDLLGRDRDGLGE-DARVVATLRHLLLDEDPLSRC--PPLMVVATTSRVQD 578
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ +R + F R +L+ T +PL V+L +A C G+V DL
Sbjct: 579 LPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLY 636
Query: 235 ALCREATMSAVKR-------SSDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-E 283
AL A+ +A R S+ +E CA + ED+ A + + ++ V +
Sbjct: 637 ALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPK 696
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
IP V+W D+GGL+D+KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 697 IPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKA 754
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S
Sbjct: 755 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 814
Query: 404 STSITVGERLLSTLLTEMDGLEQAK 428
+ V +R++S LL E+DGL +
Sbjct: 815 DSG-GVMDRVVSQLLAELDGLHSTQ 838
Score = 343 (125.8 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 96/268 (35%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 705 VGGLQDVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 762
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 763 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 817
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 818 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+A+V L + C + GADL +LC +A M+A+KR D E
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE 933
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 934 GLEPRSSALLLTMEDLLQAAARLQPSVS 961
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 454 (164.9 bits), Expect = 6.2e-42, P = 6.2e-42
Identities = 126/385 (32%), Positives = 189/385 (49%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S + + S A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRTVETKLQTTFSRARRC 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P V+ + +D L RD E D R+ + L L+D + S+ P ++VVA+T+RV
Sbjct: 522 RPVVLLLTALDLLGRDRDGLGE-DARVVATLRHLLLDEDPLSRC--PPLMVVATTSRVQD 578
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ +R + F R +L+ T +PL V+L +A C G+V DL
Sbjct: 579 LPTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLY 636
Query: 235 ALCREATMSAVKR-------SSDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-E 283
AL A+ +A R S+ +E CA + ED+ A + + ++ V +
Sbjct: 637 ALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPK 696
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
IP V+W D+GGL+D+KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 697 IPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKA 754
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S
Sbjct: 755 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 814
Query: 404 STSITVGERLLSTLLTEMDGLEQAK 428
+ V +R++S LL E+DGL +
Sbjct: 815 DSG-GVMDRVVSQLLAELDGLHSTQ 838
Score = 343 (125.8 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 96/268 (35%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 705 VGGLQDVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 762
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 763 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 817
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 818 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+A+V L + C + GADL +LC +A M+A+KR D E
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE 933
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 934 GLEPRSSALLLTMEDLLQAAARLQPSVS 961
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 452 (164.2 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 140/433 (32%), Positives = 206/433 (47%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
SE + W + G A V L ++ P L A G +LL GPPG GKT+
Sbjct: 424 SEESTLWSSLSP-PGLEALVSELCAVLK-PRLQPGGALLTGTS---SVLLRGPPGCGKTT 478
Query: 69 LVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL 128
+V A G HL + S+ G E L+ FS+A +P+V+ + +D L
Sbjct: 479 VVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRC----RPAVLLLTAVDLL 534
Query: 129 CPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
RD E D R+ + L L+ + P S P ++VVA+T+R + PA ++ F
Sbjct: 535 GRDRDGLGE-DARVMAVLRHLLLNEDPLN-SCPPLMVVATTSRAQDL-PADVQTA-FPHE 590
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA---V 245
R IL+ T +PL V+L +A C G+V DL AL ++ +A +
Sbjct: 591 LEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRI 650
Query: 246 KRSS--------DANE-CAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGL 295
K S D E CA + ED+ A + + ++ V +IP V+W D+GGL
Sbjct: 651 KNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGL 710
Query: 296 RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXX 355
+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 711 QEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAKAVATECSLTFLSV 768
Query: 356 XGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLS 415
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S + V +R++S
Sbjct: 769 KGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG-GVMDRVVS 827
Query: 416 TLLTEMDGLEQAK 428
LL E+DGL +
Sbjct: 828 QLLAELDGLHSTQ 840
Score = 333 (122.3 bits), Expect = 6.0e-29, P = 6.0e-29
Identities = 94/268 (35%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 707 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 764
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 765 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 819
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 820 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEE 935
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 936 GLEPGSSALMLTMEDLLQAAARLQPSVS 963
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 451 (163.8 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 125/387 (32%), Positives = 188/387 (48%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S +A+ S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRAVETKLQATFSRARRC 522
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P+V+ + +D L RD E D R+A+ L L+D + S+ P ++VVA+T+RV
Sbjct: 523 RPAVLLLTAVDLLGRDRDGLGE-DARVAATLRHLLLDEDALSRC--PPLMVVATTSRVQD 579
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ ++ + F R IL+ T +PL V+L +A C G+V DL
Sbjct: 580 LPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLY 637
Query: 235 AL----CREA--------TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV 282
AL CR A + + + + C + ED+ A + + ++ V
Sbjct: 638 ALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGA 697
Query: 283 -EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
IP V+W D+GGL+D+KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 698 PRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLA 755
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG
Sbjct: 756 KAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGR 815
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAK 428
S + V +R++S LL E+DGL +
Sbjct: 816 SGDSG-GVMDRVVSQLLAELDGLHSTQ 841
Score = 344 (126.2 bits), Expect = 4.0e-30, P = 4.0e-30
Identities = 96/268 (35%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 708 VGGLQDVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 765
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 766 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPSRGRSGDSG 820
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 821 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+A+V L + C + GADL +LC +A M+A+KR D E
Sbjct: 877 RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEE 936
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 937 GLELRSSALLLTMEDLLQAAARLQPSVS 964
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 449 (163.1 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 128/386 (33%), Positives = 191/386 (49%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ G E L+ AFS+A
Sbjct: 466 VLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRC---- 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+P V+ + +D L RD E D R+ + L L+ P S P ++VVA+T+R +
Sbjct: 522 RPVVLLLTAVDLLGRDRDGLGE-DARVVATLRHLLLDEDPL-ASCPPLMVVATTSRAQDL 579
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
PA ++ F R +L+ T +PL V+L +A C G+V DL A
Sbjct: 580 -PADVQTA-FPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLARRCAGFVVGDLFA 637
Query: 236 LCREATMSA---VKRS------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV- 282
L ++ +A +K S S+ +E CA + ED+ A + + ++ +
Sbjct: 638 LLTHSSRAACTRIKNSGWAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAP 697
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
IP V+W D+GGL+++KK++ + ++ P++H S LG+ G LLHGPPG
Sbjct: 698 RIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MYVG+SE +R F RAR AAP IIFFDE D + RG S
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRS 815
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAK 428
+ V +R++S LL E+DGL +
Sbjct: 816 GDSG-GVMDRVVSQLLAELDGLHSTQ 840
Score = 331 (121.6 bits), Expect = 9.9e-29, P = 9.9e-29
Identities = 94/268 (35%), Positives = 140/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + E I PL + + LGL+ GLLL+GPPGTGKT L +AV EC
Sbjct: 707 VGGLQEVKKEILETIQLPLEHP-ELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATECSLT 764
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +RE F++A + A P ++F DE+D+L P R +
Sbjct: 765 FLSVKGPELINM-YVGQSEENVREVFARARAAA----PCIIFFDELDSLAPNRGRSGDSG 819
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +DPAL R GRFD
Sbjct: 820 GVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNED 875
Query: 197 -XXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ +L T+K L+ +V L + C + GADL +LC +A +A+KR D E
Sbjct: 876 RASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRVRDLEE 935
Query: 254 C----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED A + + PS++
Sbjct: 936 GLEPGSSALLLTMEDLLQAAARLQPSVS 963
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 421 (153.3 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 119/400 (29%), Positives = 182/400 (45%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVR------ECGAHLTVISPHSVHKAHVGESEKA 100
K + P +L+YGPPG+GKT L RA + + AH+ ++S ++ V
Sbjct: 587 KFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHV 646
Query: 101 LREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFT--LMD------S 152
L ++ HA PSV+ +D++D++ + + T L D
Sbjct: 647 LSSVIAEGLEHA----PSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGE 702
Query: 153 NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL 212
+ S + + VAS ++ I L SGRFD R ILK +K L
Sbjct: 703 YRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLL 762
Query: 213 DANVD-LEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSV 271
D + D L +A C GY DLE L A +A+ R ++ ED+ A
Sbjct: 763 DCSEDILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHD 822
Query: 272 VGPSITRGVTV---EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR--- 325
P R +T E ++ WED+GG+ D+K +++ +E P K F++ SP+R
Sbjct: 823 FVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAK---SPLRLRS 879
Query: 326 GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPS 385
LL+GPPGC G EL + Y+G SE +R+ F +A AAP
Sbjct: 880 NVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPC 939
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
I+FFDE D + KRG +T +T +R+++ LTE+DG+E
Sbjct: 940 ILFFDEFDSIAPKRG-HDNTGVT--DRVVNQFLTELDGVE 976
Score = 321 (118.1 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 80/229 (34%), Positives = 125/229 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG A++E+I P + K L+ +LLYGPPG GKT +V A C
Sbjct: 844 EDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
Query: 79 AH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
++V P ++K ++G SE+A+R+ FS+A++ A P ++F DE D++ P+R H
Sbjct: 904 LRFISVKGPELLNK-YIGASEQAVRDIFSKAAAAA----PCILFFDEFDSIAPKRGHDNT 958
Query: 138 QDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ +Q T +D + + V V A+T+R D +DPAL R GR D
Sbjct: 959 GVTDRVVNQFLTELDGVEV----LTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSP 1014
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R EIL + ++K+ + ++DLE IA G+ GADL+AL +A ++AV
Sbjct: 1015 PERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAV 1063
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 379 (138.5 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 84/221 (38%), Positives = 122/221 (55%)
Query: 211 PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARS 270
PL+ ++D +A +G+ G DL +L + A + + +E AR
Sbjct: 396 PLELHLD---VARHTHGFTGGDLCSLLKAAKFARGRTH-------------LERVNDARK 439
Query: 271 VVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLH 330
+ P+ R +E+P V+W DIGG +LK ++QQAV WP KH AF R GI P G LL+
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 331 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFD 390
GPPGC G EL+S +VG+SE +R+ F RAR AP+I+FFD
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFD 559
Query: 391 EADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
E D VG+ RG S+ ++ +R+L+ LLTE+DGLE++ +I
Sbjct: 560 EIDAVGSSRGSEKSSGVS--DRVLAQLLTELDGLEKSSRVI 598
Score = 345 (126.5 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 89/275 (32%), Positives = 137/275 (49%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
I+ N W IGGN +++ + +P + ++ G+ P G+LLYGPPG K
Sbjct: 450 ILEVPNVSWND---IGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSK 506
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T + RA+ E + + + VG+SEKA+R+ FS+A A P++VF DEID
Sbjct: 507 TLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVA----PTIVFFDEID 562
Query: 127 ALCPRRDHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
A+ R + V R+ +QL T +D + S V+++A+TNR D +D AL R GR
Sbjct: 563 AVGSSRGSEKSSGVSDRVLAQLLTELDGLEKSS----RVILLAATNRPDQLDSALLRPGR 618
Query: 185 FDXXXXXXXXXXXXRFEILKLYTKKVPLDANV-DLEAIATSCNGYVGADLEALCREATMS 243
D R IL++ TKK+ D V ++ + +GY GA+L A+CR A M
Sbjct: 619 LDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMF 678
Query: 244 AVKRSSDANECAGVLSVTMEDWRHARSVVGPSITR 278
A++ S DA T+ W H + ++R
Sbjct: 679 AMRESIDA---------TIVQWTHFEQALAAVVSR 704
Score = 59 (25.8 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG A + L + + P+ QK + P +L++G PG+GKT L++ V
Sbjct: 248 IGGCFTAKQVLEDYVISPV-----RQK---ESPCSVLIWGLPGSGKTLLLKEVALVLSGS 299
Query: 81 LTVI 84
T I
Sbjct: 300 TTYI 303
Score = 40 (19.1 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 116 KPSVVFIDEIDALCPRRDHRREQD 139
KPS+V + +A+ +D R QD
Sbjct: 7 KPSLVTCPQCNAVVLTKDSLRHQD 30
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 412 (150.1 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 122/399 (30%), Positives = 190/399 (47%)
Query: 45 AQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREA 104
+Q L +LL GP G+GKT VRAV HL + S+ +E+ + A
Sbjct: 155 SQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMA 214
Query: 105 FSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVV 164
F+QA + P V+ + +I+ L RD R +D R+ + L L+ P+++S P V+
Sbjct: 215 FAQAQQY----HPCVLLLKDIEVLGRDRD-RLGEDARVIATLRQLLLDRDPAQSSHP-VL 268
Query: 165 VVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATS 224
V+ +T + + ++ + F R +L + T +PL V L +A
Sbjct: 269 VIGTTCKPQDVPTDVQTA--FLHEVKIEALSEDQRRAMLSMLTASLPLGKEVSLAKLARR 326
Query: 225 CNGYVGADLEALCREATMSAVKR------SSDANE------CAGVLSVTMEDWRHARSVV 272
G+V D AL ++ +A R NE C V ED+ A +
Sbjct: 327 TAGFVLGDFCALLSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLEEDFNVALDQL 386
Query: 273 GPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ ++ V +IP V+W+D+GGL ++KK++ ++ P++H S LG+ G LL+G
Sbjct: 387 HDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS-LGLCR-SGLLLYG 444
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G EL +MYVG+SE +RN F RAR AAP IIFFDE
Sbjct: 445 PPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDE 504
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
D + RG S + V +R++S LL E+DGL ++ +
Sbjct: 505 LDSLAPNRGRSGDSG-GVMDRVVSQLLAELDGLHSSREV 542
Score = 339 (124.4 bits), Expect = 5.8e-30, P = 5.8e-30
Identities = 94/268 (35%), Positives = 141/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + I PL + + LGL GLLLYGPPGTGKT L +AV C
Sbjct: 407 VGGLHEVKKEILDTIQLPLEHP-ELLSLGL-CRSGLLLYGPPGTGKTLLAKAVATTCTMT 464
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +R F++A + A P ++F DE+D+L P R +
Sbjct: 465 FLSVKGPELINM-YVGQSEENVRNVFARARAAA----PCIIFFDELDSLAPNRGRSGDSG 519
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S+ V V+ +TNR D +DPAL R GRFD
Sbjct: 520 GVMDRVVSQLLAELDGLHSSR----EVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNED 575
Query: 197 X-XRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRSSDANEC 254
+ ++L T+K LD +V+L +I C + GAD+ +LC +A M AVKR + E
Sbjct: 576 RESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEE 635
Query: 255 -----AGVLSVTMEDWRHARSVVGPSIT 277
+ L +TMED+ A + + PS++
Sbjct: 636 GLDTESSALILTMEDFLQAAARLQPSVS 663
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 407 (148.3 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 97/237 (40%), Positives = 135/237 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 406 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 465
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 466 QGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVR 520
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 521 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 576
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+ P ++ LE +A +C GY GAD++++C EA + A++R
Sbjct: 577 SLPDKDARKEILKIHTRDWNPKPLDIFLEELAENCVGYCGADIKSICSEAALCALRR 633
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/169 (31%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL + L++ V +P+ + F + I P RG
Sbjct: 384 RMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 443
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 444 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 503
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 504 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIV 549
Score = 39 (18.8 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 232 DLEALCREATMSAVKRSSDANECA 255
D E LC E S KR +++ A
Sbjct: 1076 DFEQLCEEIQESRKKRGCSSSKYA 1099
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 330 (121.2 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 70/213 (32%), Positives = 113/213 (53%)
Query: 227 GYVGADLEALCREATMSAV----KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV 282
G++ DL LCR ++ V + + NE + ++ + ++ A + PS V
Sbjct: 419 GFLFKDLTKLCRTVSLLTVSSFEEEEEEENENEKEIKISFKIFKEALKFIKPSTLINFDV 478
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
+ V W+ IGG + +K++ +Q +EWP+K+ F RL ++ G LLHGP GC
Sbjct: 479 TVQNVKWDRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVK 538
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG-G 401
G+++YS ++GESE ++R+ F+ ARL++P I+FFDE D + RG G
Sbjct: 539 AIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSG 598
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKVIIYPI 434
+ +R+LS LL EMDG+ Q K I+ I
Sbjct: 599 DDNEDGGTSKRILSQLLNEMDGI-QVKSQIFLI 630
Score = 269 (99.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 78/240 (32%), Positives = 116/240 (48%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW + IGG + E R+LI +PL Y ++L L GLLL+GP G GK+ +V+
Sbjct: 482 NVKW---DRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVK 538
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ E + I ++ +GESE+ +R+ F A LS P ++F DEID+L
Sbjct: 539 AIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSAR---LSS-PCIMFFDEIDSLTLS 594
Query: 132 R---DHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D + RI SQL MD + + ++ TN + +ID AL R GRF+
Sbjct: 595 RGSGDDNEDGGTSKRILSQLLNEMDGIQVKS----QIFLIGCTNSIQSIDSALLRPGRFE 650
Query: 187 XXXXXXXXXXXXRFEILKLYT------KKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
R +IL + + K + V L+ IAT +G+ G+ L LC +A
Sbjct: 651 SLIHIDLPSLDDRLDILNVLSTNSLNFNKDEITQQVWLD-IATQTSGFTGSQLYDLCNQA 709
Score = 72 (30.4 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 22/105 (20%), Positives = 46/105 (43%)
Query: 114 SGKPSVVFIDEIDALCPR-RDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRV 172
S +P + ++ +D++ + D+ ++ +L +D K ++ +++++ V
Sbjct: 294 SKEPMIYILNNLDSIVGKISDNENSYQKKVIQRLTNFIDHIKSNE------IILSTCTSV 347
Query: 173 DAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL--DAN 215
+ ID ++ R+GR D R IL K PL D N
Sbjct: 348 ENIDQSITRAGRIDKFIHLTIPTQSKRMLILSNLLKNTPLQYDTN 392
Score = 54 (24.1 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 41 YSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRE 76
YS+Q L K G+L+ GP GT K L+ + ++
Sbjct: 236 YSNQLNFLKSK---GILIDGPEGTSKLQLIEYIAQQ 268
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 405 (147.6 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 97/237 (40%), Positives = 135/237 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 422 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 481
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 482 QGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVR 536
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 537 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 592
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+ P ++ LE +A +C GY GAD++++C EA + A++R
Sbjct: 593 SLPDKDARKEILKIHTRDWNPKPLDMFLEELAENCVGYCGADIKSICSEAALCALRR 649
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/169 (31%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL + L++ V +P+ + F + I P RG
Sbjct: 400 RMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 459
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 460 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 519
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 520 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIV 565
Score = 39 (18.8 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 232 DLEALCREATMSAVKRSSDANECA 255
D E LC E S KR +++ A
Sbjct: 1092 DFEQLCEEIQESRKKRGCSSSKYA 1115
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 404 (147.3 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 97/237 (40%), Positives = 134/237 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 426 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 485
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 486 QGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVR 540
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 541 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 596
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+ P + LE +A +C GY GAD++++C EA + A++R
Sbjct: 597 SLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRR 653
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/169 (31%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL + L++ V +P+ + F + I P RG
Sbjct: 404 RMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 463
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 464 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 523
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 524 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIV 569
Score = 39 (18.8 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 232 DLEALCREATMSAVKRSSDANECA 255
D E LC E S KR +++ A
Sbjct: 1096 DFEQLCEEIQESRKKRGCSSSKYA 1119
>ZFIN|ZDB-GENE-110411-210 [details] [associations]
symbol:atad2b "ATPase family, AAA domain containing
2B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-110411-210 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01035125
EMBL:CABZ01035126 EMBL:CABZ01035127 EMBL:CABZ01035128
EMBL:CABZ01035129 EMBL:CABZ01035130 EMBL:CABZ01035131
EMBL:CABZ01035132 EMBL:CABZ01035133 EMBL:CABZ01035134
EMBL:CABZ01035135 EMBL:CABZ01035136 EMBL:CABZ01035137
EMBL:CABZ01035138 EMBL:FP103080 IPI:IPI00504895
Ensembl:ENSDART00000085416 ArrayExpress:E7FE14 Bgee:E7FE14
Uniprot:E7FE14
Length = 1402
Score = 397 (144.8 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 95/236 (40%), Positives = 136/236 (57%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG +++L+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 395 DSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 454
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
+S A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 455 QGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 510
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 511 SRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 566
Query: 193 XXXXXXRFEILKLYTKK-VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+++T+ P A ++ +A C GY GAD++ALC EA ++A++R
Sbjct: 567 LPDKKARKHILEIHTRDWSPKLAEPFIDELAERCVGYCGADIKALCTEAALAALRR 622
Score = 189 (71.6 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 51/150 (34%), Positives = 71/150 (47%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++ +GGL + L++ V +P+ + F + I P RG L +GPPG
Sbjct: 392 VKFDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 451
Query: 347 XXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
GA+ S +VGESE LR F +A L PSIIFFDE D + R
Sbjct: 452 ECSQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR-- 509
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKVII 431
SS + ++STLL MDGL+ I+
Sbjct: 510 -SSRQDQIHSSIVSTLLALMDGLDSRGEIV 538
Score = 46 (21.3 bits), Expect = 2.9e-37, Sum P(2) = 2.9e-37
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSII+
Sbjct: 802 LYSVSAKTPEESCAQVFREARRCVPSIIY 830
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 398 (145.2 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 96/236 (40%), Positives = 133/236 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 390 DSIGGLGKHISALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 449
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA +PS++F DEID + P R
Sbjct: 450 QGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM----RPSIIFFDEIDGIAPVRS 505
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD S VVV+ +TNR+D+IDPALRR GRFD
Sbjct: 506 SRQDQIHSSIVSTLLALMDG----LDSRGEVVVIGATNRLDSIDPALRRPGRFDREFLFN 561
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R +ILK++T+ P ++ LE +A C GY G D++A+C EA + A++R
Sbjct: 562 LPDREARKDILKIHTRHWDPQLSDAFLEELADKCVGYCGTDIKAVCAEAALCALRR 617
Score = 191 (72.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 231 ADLEALCREATMSAVKRSSDANECAGVLSVTMEDWR--HA-RSVVGPSITRGVTVEIPK- 286
+D E R T S R+ N C +++ +D H R +G S+ ++I +
Sbjct: 331 SDEEKFERRRTKS---RNRSINRCLP-MNLRKDDLLGIHKDRIKIGASLADVDPMQIDQT 386
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++ IGGL L++ V +P+ + F + I P RG L +GPPG
Sbjct: 387 VRFDSIGGLGKHISALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 446
Query: 347 XXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
GA+ S +VGESE LR F +A PSIIFFDE D + R
Sbjct: 447 ECSQGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGIAPVR-- 504
Query: 402 SSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SS + ++STLL MDGL+ + +V++
Sbjct: 505 -SSRQDQIHSSIVSTLLALMDGLDSRGEVVV 534
Score = 44 (20.5 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 358 AELYSMYVGESEALLRNTFQRARLAAPSIIF 388
A LY + E F AR APSI++
Sbjct: 788 AVLYGVSSATPEEACAQVFCEARRTAPSIVY 818
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 407 (148.3 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 103/279 (36%), Positives = 153/279 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 81 DSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 140
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +P+++F DEID L P R
Sbjct: 141 RGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPAIIFFDEIDGLAPVR 195
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 196 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 251
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR--- 247
R EILK++T+ P ++ LE +A C GY GAD++++C EA + A++R
Sbjct: 252 SLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYP 311
Query: 248 ----SSDANEC-AGVLSVTMEDWRHARSVVGPSITRGVT 281
+S+ + ++++ +D+ A + P+ R VT
Sbjct: 312 QIYTTSEKLQLDLSSITISAKDFEAALQKIRPASQRAVT 350
Score = 180 (68.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 52/169 (30%), Positives = 77/169 (45%)
Query: 269 RSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL L++ V +P+ + F + I P RG
Sbjct: 59 RMKIGASLADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 118
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 119 LFYGPPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 178
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
P+IIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 179 RPAIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIV 224
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 396 (144.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 94/236 (39%), Positives = 132/236 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+A+GG + AL+E++ FPLLY ++ ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 364 DAVGGLSDHISALKEMVVFPLLYPEVFERFKIQPPRGCLFYGPPGTGKTLVARALANECS 423
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 424 QGNRRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVRS 479
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
+++Q I S L LMD VVV+ +TNR+D+IDPALRR GRFD
Sbjct: 480 SKQDQIHSSIVSTLLALMDG----LDGRGEVVVIGATNRLDSIDPALRRPGRFDREFLFG 535
Query: 193 XXXXXXRFEILKLYTKK-VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EI K++T+ P + ++ +AT C GY GAD+++LC EA + A++R
Sbjct: 536 LPNKEARKEIFKIHTRDWTPKLLDTFIDELATECVGYCGADIKSLCAEAALCALRR 591
Score = 196 (74.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 57/173 (32%), Positives = 82/173 (47%)
Query: 266 RHARSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPV 324
R R +G S+ ++I V ++ +GGL D L++ V +P+ + F R I P
Sbjct: 339 RKDRMKIGKSLADVDPMQIDSSVRFDAVGGLSDHISALKEMVVFPLLYPEVFERFKIQPP 398
Query: 325 RGALLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRA 379
RG L +GPPG GA+ S +VGESE LR F +A
Sbjct: 399 RGCLFYGPPGTGKTLVARALANECSQGNRRVAFFMRKGADCLSKWVGESERQLRLLFDQA 458
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ + +V++
Sbjct: 459 YQMRPSIIFFDEIDGLAPVR---SSKQDQIHSSIVSTLLALMDGLDGRGEVVV 508
Score = 41 (19.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 229 VGADLEALCREATMSAVKRSSDANECAGVLSVTM 262
+ D E LC E S KR +++ A M
Sbjct: 1031 IDEDFEQLCEEIKESRKKRGCSSSKYAPAFYTVM 1064
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 392 (143.0 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 104/277 (37%), Positives = 150/277 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 290 DSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 349
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 350 QGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 405
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD + +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 406 SRQDQIHSSIVSTLLALMDG----LDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 461
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---- 247
R IL+++T+ P ++ L +A C GY GAD++ALC EA + A++R
Sbjct: 462 LPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ 521
Query: 248 --SSDANECAGVLSVTM--EDWRHARSVVGPSITRGV 280
+S V S+ + +D+ HA + P+ R V
Sbjct: 522 IYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAV 558
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 58/169 (34%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R VG S+ + I K V ++ IGGL L++ V +P+ + F + I P RG
Sbjct: 268 RVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGC 327
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A L
Sbjct: 328 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 387
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 388 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDNRGEIV 433
Score = 44 (20.5 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSI++
Sbjct: 695 LYSVSAKTPEESCAQIFREARRTVPSIVY 723
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 392 (143.0 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 104/277 (37%), Positives = 150/277 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 238 DSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 297
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 298 QGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 353
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD + +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 354 SRQDQIHSSIVSTLLALMDG----LDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 409
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---- 247
R IL+++T+ P ++ L +A C GY GAD++ALC EA + A++R
Sbjct: 410 LPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ 469
Query: 248 --SSDANECAGVLSVTM--EDWRHARSVVGPSITRGV 280
+S V S+ + +D+ HA + P+ R V
Sbjct: 470 IYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAV 506
Score = 193 (73.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 58/169 (34%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R VG S+ + I K V ++ IGGL L++ V +P+ + F + I P RG
Sbjct: 216 RVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGC 275
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A L
Sbjct: 276 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 335
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 336 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDNRGEIV 381
Score = 44 (20.5 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSI++
Sbjct: 642 LYSVSAKTPEESCAQIFREARRTVPSIVY 670
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 392 (143.0 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 104/277 (37%), Positives = 150/277 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 400 DSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 459
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 460 QGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 515
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD + +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 516 SRQDQIHSSIVSTLLALMDG----LDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 571
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---- 247
R IL+++T+ P ++ L +A C GY GAD++ALC EA + A++R
Sbjct: 572 LPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ 631
Query: 248 --SSDANECAGVLSVTM--EDWRHARSVVGPSITRGV 280
+S V S+ + +D+ HA + P+ R V
Sbjct: 632 IYASSHKLQLDVSSIVLSAQDFYHAMQNIVPASQRAV 668
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/169 (34%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R VG S+ + I K V ++ IGGL L++ V +P+ + F + I P RG
Sbjct: 378 RVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGC 437
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A L
Sbjct: 438 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 497
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 498 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDNRGEIV 543
Score = 44 (20.5 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSI++
Sbjct: 804 LYSVSAKTPEESCAQIFREARRTVPSIVY 832
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 392 (143.0 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 104/277 (37%), Positives = 150/277 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 403 DSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 462
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 463 QGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 518
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD + +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 519 SRQDQIHSSIVSTLLALMDG----LDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 574
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---- 247
R IL+++T+ P ++ L +A C GY GAD++ALC EA + A++R
Sbjct: 575 LPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ 634
Query: 248 --SSDANECAGVLSVTM--EDWRHARSVVGPSITRGV 280
+S V S+ + +D+ HA + P+ R V
Sbjct: 635 IYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAV 671
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/169 (34%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R VG S+ + I K V ++ IGGL L++ V +P+ + F + I P RG
Sbjct: 381 RVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGC 440
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A L
Sbjct: 441 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 500
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 501 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDNRGEIV 546
Score = 44 (20.5 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSI++
Sbjct: 808 LYSVSAKTPEESCAQIFREARRTVPSIVY 836
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 392 (143.0 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 104/277 (37%), Positives = 150/277 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 405 DSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 464
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 465 QGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 520
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD + +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 521 SRQDQIHSSIVSTLLALMDG----LDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 576
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---- 247
R IL+++T+ P ++ L +A C GY GAD++ALC EA + A++R
Sbjct: 577 LPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRRRYPQ 636
Query: 248 --SSDANECAGVLSVTM--EDWRHARSVVGPSITRGV 280
+S V S+ + +D+ HA + P+ R V
Sbjct: 637 IYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAV 673
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/169 (34%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R VG S+ + I K V ++ IGGL L++ V +P+ + F + I P RG
Sbjct: 383 RVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGC 442
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A L
Sbjct: 443 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 502
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 503 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDNRGEIV 548
Score = 44 (20.5 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSI++
Sbjct: 809 LYSVSAKTPEESCAQIFREARRTVPSIVY 837
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 394 (143.8 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 96/237 (40%), Positives = 134/237 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 412 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 471
Query: 79 ------AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR 132
A + K VGESE+ LR F QA +PS++F DEID L P R
Sbjct: 472 QGDKRVAFFMRKGADCLSK-WVGESERQLRLLFDQAYQM----RPSIIFFDEIDGLAPVR 526
Query: 133 DHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXX 191
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 527 SSRQDQIHSSIVSTLLALMDG----LDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLF 582
Query: 192 XXXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+ P ++ LE +A + GY GAD++++C EA + A++R
Sbjct: 583 SLPDKDARKEILKIHTRDWNPKPLDMFLEELAENSVGYCGADIKSVCSEAALCALRR 639
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/169 (31%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R +G S+ +++ V ++ +GGL + L++ V +P+ + F + I P RG
Sbjct: 390 RMKIGASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGC 449
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A
Sbjct: 450 LFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQM 509
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 510 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDSRGEIV 555
Score = 39 (18.8 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 232 DLEALCREATMSAVKRSSDANECA 255
D E LC E S KR +++ A
Sbjct: 1082 DFEQLCEEIQESRKKRGCSSSKYA 1105
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 388 (141.6 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 112/318 (35%), Positives = 165/318 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG ++ L+E++ PLLY Q + PRG+L +GPPGTGKT + RA+ C +
Sbjct: 415 IGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSD 474
Query: 81 LTVIS-----PHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
I+ + VGE+E+ LR F +A H +PS++F DEID L P R +
Sbjct: 475 ERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKH----QPSIIFFDEIDGLAPVRSSK 530
Query: 136 REQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+EQ I S L LMD + V+V+ +TNR DA+DPALRR GRFD
Sbjct: 531 QEQIHASIVSTLLALMDG----MDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLP 586
Query: 195 XXXXRFEILKLYTKK--VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD-- 250
RF+IL++ T+K PL N ++ +A GY GADL +LC EA + +++RS
Sbjct: 587 DVKARFKILQIQTRKWSSPLSTNF-IDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQI 645
Query: 251 --ANECAGV----LSVTMEDWRHARSVVGPSITR--GVTVE-IPKVTWEDIGG-LRDLKK 300
+N+ V + V + D+ A + PS R G + + +P++ + L +LK
Sbjct: 646 YRSNDKLLVDPSKIKVKVSDFMLALKKIVPSSARSTGSSPQPLPELIKPLLADQLNNLKN 705
Query: 301 KLQQAVEWPIKHSTAFSR 318
KL + IK +T F R
Sbjct: 706 KLDYMLN--IKDTT-FQR 720
Score = 200 (75.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 51/151 (33%), Positives = 76/151 (50%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++DIGGL + +L++ V P+ + + I+P RG L HGPPG
Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469
Query: 347 XXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
GA++ S +VGE+E LR F+ A+ PSIIFFDE D + R
Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVR-- 527
Query: 402 SSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SS + ++STLL MDG++ + +VI+
Sbjct: 528 -SSKQEQIHASIVSTLLALMDGMDNRGQVIV 557
Score = 45 (20.9 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 369 EALLRNTFQRARLAAPSIIFFDEADV 394
EA + +F A+ PS++F D+
Sbjct: 815 EAAVVQSFMEAKKRQPSVVFIPNLDI 840
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 387 (141.3 bits), Expect = 6.1e-36, Sum P(2) = 6.1e-36
Identities = 95/236 (40%), Positives = 134/236 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
++IGG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 397 DSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 456
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F QA + + +PS++F DEID L P R
Sbjct: 457 QGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YLM--RPSIIFFDEIDGLAPVRS 512
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
R++Q I S L LMD + +VV+ +TNR+D+IDPALRR GRFD
Sbjct: 513 SRQDQIHSSIVSTLLALMDG----LDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFN 568
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+++T+ P ++ L +A C GY GAD++ALC EA + A++R
Sbjct: 569 LPDQRARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRR 624
Score = 193 (73.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/169 (34%), Positives = 78/169 (46%)
Query: 269 RSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
R VG S+ + I K V ++ IGGL L++ V +P+ + F + I P RG
Sbjct: 375 RVKVGASLADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGC 434
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLA 382
L +GPPG GA+ S +VGESE LR F +A L
Sbjct: 435 LFYGPPGTGKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLM 494
Query: 383 APSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ I+
Sbjct: 495 RPSIIFFDEIDGLAPVR---SSRQDQIHSSIVSTLLALMDGLDNRGEIV 540
Score = 44 (20.5 bits), Expect = 6.1e-36, Sum P(2) = 6.1e-36
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIF 388
LYS+ E F+ AR PSI++
Sbjct: 805 LYSVSAKTPEESCAQIFREARRTVPSIVY 833
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 92/251 (36%), Positives = 138/251 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ +RE++ PL + +K+G++ P+G+LLYGPPGTGKT L +AV E
Sbjct: 170 EDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETN 229
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
A + + K +GE +++ F A A PS++FIDEIDA+ +R D
Sbjct: 230 ATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKA----PSIIFIDEIDAIAAKRTDALTG 285
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + L L+ + + V ++ +TNR D +DPA+ R GRFD
Sbjct: 286 GDREVQRTLMQLL-AEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEK 344
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R EILK++T+K+ L +V+LE IA G VGA+L+A+C EA M+A++ D
Sbjct: 345 GRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDY------ 398
Query: 258 LSVTMEDWRHA 268
VTM+D+R A
Sbjct: 399 --VTMDDFRKA 407
Score = 260 (96.6 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 53/143 (37%), Positives = 78/143 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P V +EDIGGL +++++ VE P+KH F ++GI P +G LL+GPPG
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G+EL ++GE +L+++ F+ A+ APSIIF DE D + AKR +
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 403 SSTSITVGERLLSTLLTEMDGLE 425
+ +R L LL EMDG +
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFD 305
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 378 (138.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 92/234 (39%), Positives = 127/234 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + L+E++ PLLY Q + PRG+L +GPPGTGKT + RA+ C
Sbjct: 402 VGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALAASCSTS 461
Query: 81 ---LTVISPHSVH--KAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
+T VGE+E+ LR F +A + +PS++F DEID L P R +
Sbjct: 462 ERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQ----QPSIIFFDEIDGLAPVRSSK 517
Query: 136 REQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+EQ I S L LMD + V+V+ +TNR DAIDPALRR GRFD
Sbjct: 518 QEQIHASIVSTLLALMDG----MDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLP 573
Query: 195 XXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R EILK++T+K P ++ LE +A GY GADL ALC EA +++++R
Sbjct: 574 DLGSRKEILKIHTRKWNPELPDLFLERLAQLTKGYGGADLRALCTEAALNSIQR 627
Score = 185 (70.2 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 48/146 (32%), Positives = 71/146 (48%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXX 351
+GGL + +L++ V P+ + + I+P RG L HGPPG
Sbjct: 402 VGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALAASCSTS 461
Query: 352 XXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
GA+ S +VGE+E LR F+ A+ PSIIFFDE D + R SS
Sbjct: 462 ERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVR---SSKQ 518
Query: 407 ITVGERLLSTLLTEMDGLE-QAKVII 431
+ ++STLL MDG++ + +VI+
Sbjct: 519 EQIHASIVSTLLALMDGMDNRGQVIV 544
Score = 38 (18.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 369 EALLRNTFQRARLAAPSIIFFDEADV 394
E+ + F AR P+I+F D+
Sbjct: 792 ESTIVQAFIEARRHQPAILFIPNIDI 817
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 385 (140.6 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 112/380 (29%), Positives = 174/380 (45%)
Query: 55 GLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKAL-REAFSQASSHAL 113
G L+YG G+GKT L++ V ++ + + + E+ + L + F +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 114 SGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSN--KPSKTSVPHVVVVASTNR 171
KPSV+ +D ID L D ++QL SN K ++ ++ S N
Sbjct: 553 WNKPSVLILDNIDKLMSVE--MENMDATKSNQLTEFFISNLTKIHHQLNSNLSILLSANS 610
Query: 172 VDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLY-TKKVPLDANVDLEAIATSCNGYVG 230
D I+ L S + RFEIL Y T K+ L VDL + + GY+
Sbjct: 611 KDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLP 670
Query: 231 ADLEALC----REATMSAVKRSSDAN-ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP 285
DL+ L E ++ + ++ E +VT E A + PS RGV ++
Sbjct: 671 NDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTPSNLRGVKLQKS 730
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+ W DIGGL++ K L + +EWP K++ F+ + G LL+G PGC
Sbjct: 731 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ + Y+G SE +R F+RA+ A P I+FFDE D + KRG ST
Sbjct: 791 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG-HDST 849
Query: 406 SITVGERLLSTLLTEMDGLE 425
+T +R+++ +LT+MDG E
Sbjct: 850 GVT--DRVVNQMLTQMDGAE 867
Score = 311 (114.5 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/227 (34%), Positives = 121/227 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + A L E + +P Y+ L+ G+LLYG PG GKT L A+ +CG +
Sbjct: 737 IGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLN 796
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
+++ P ++K ++G SE+++RE F +A + KP ++F DE D++ P+R H
Sbjct: 797 FISIKGPEILNK-YIGASEQSVRELFERAQA----AKPCILFFDEFDSIAPKRGHDSTGV 851
Query: 140 V-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T MD + + V V+A+T+R D ID AL R GR D
Sbjct: 852 TDRVVNQMLTQMDGAE----GLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 907
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ T K+ L +V+L IA G+ GAD++ L A + AV
Sbjct: 908 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV 954
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 385 (140.6 bits), Expect = 2.0e-34, P = 2.0e-34
Identities = 112/380 (29%), Positives = 174/380 (45%)
Query: 55 GLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKAL-REAFSQASSHAL 113
G L+YG G+GKT L++ V ++ + + + E+ + L + F +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 114 SGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSN--KPSKTSVPHVVVVASTNR 171
KPSV+ +D ID L D ++QL SN K ++ ++ S N
Sbjct: 553 WNKPSVLILDNIDKLMSVE--MENMDATKSNQLTEFFISNLTKIHHQLNSNLSILLSANS 610
Query: 172 VDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLY-TKKVPLDANVDLEAIATSCNGYVG 230
D I+ L S + RFEIL Y T K+ L VDL + + GY+
Sbjct: 611 KDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLP 670
Query: 231 ADLEALC----REATMSAVKRSSDAN-ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP 285
DL+ L E ++ + ++ E +VT E A + PS RGV ++
Sbjct: 671 NDLKILSDRIYHEVLFNSTETETETETEATTNAAVTSEHIEKALAGYTPSNLRGVKLQKS 730
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
+ W DIGGL++ K L + +EWP K++ F+ + G LL+G PGC
Sbjct: 731 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G E+ + Y+G SE +R F+RA+ A P I+FFDE D + KRG ST
Sbjct: 791 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRG-HDST 849
Query: 406 SITVGERLLSTLLTEMDGLE 425
+T +R+++ +LT+MDG E
Sbjct: 850 GVT--DRVVNQMLTQMDGAE 867
Score = 311 (114.5 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 78/227 (34%), Positives = 121/227 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + A L E + +P Y+ L+ G+LLYG PG GKT L A+ +CG +
Sbjct: 737 IGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAGQCGLN 796
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
+++ P ++K ++G SE+++RE F +A + KP ++F DE D++ P+R H
Sbjct: 797 FISIKGPEILNK-YIGASEQSVRELFERAQA----AKPCILFFDEFDSIAPKRGHDSTGV 851
Query: 140 V-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +Q+ T MD + + V V+A+T+R D ID AL R GR D
Sbjct: 852 TDRVVNQMLTQMDGAE----GLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYED 907
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
R +IL+ T K+ L +V+L IA G+ GAD++ L A + AV
Sbjct: 908 RLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAV 954
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 386 (140.9 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 122/439 (27%), Positives = 208/439 (47%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKL-----GLKWPRGLLLYGPPG 63
++ N +K +GG + E I+ LL +QKL GL+ G+LL G G
Sbjct: 552 TDRNLPYKRLNHLGGVDKLGTSSFEHISHSLLGRPLSQKLAGIAVGLR-SGGVLLTGGKG 610
Query: 64 TGKTSLVRAVVREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSV 119
+GK++L +A+ +E AH+ VI ++ +G K + EAF +AS +PS+
Sbjct: 611 SGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEASWR----QPSI 666
Query: 120 VFIDEIDALC---PRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+ +D++D + P +H + +S+L + L D K + + ++A++ A+
Sbjct: 667 ILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEVISLGSLIALIATSQSEHAL 726
Query: 176 DPAL-RRSGR--FDXXXXXXXXXXXXRFEIL-KLYTKKVPLD----ANVDLEAIATSCNG 227
P+L G F R E+L + K+ D +++DL+ +A G
Sbjct: 727 HPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKLNCDVKKFSDLDLQYVAKETEG 786
Query: 228 YVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK- 286
+V D L A + + + G L+++ D++ A P R V++ PK
Sbjct: 787 FVARDFTMLVDRAIHACISNQNAFQH--GELNLSTVDFQKALKDFTPLALRNVSLHKPKD 844
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+ W+ IGGL+D+++ L + P K+ F+ L I G LL+G PG
Sbjct: 845 IGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVAR 904
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G EL S Y+G SE +R+ F RA+ A P I+FFDE D + +RG +T
Sbjct: 905 ESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRG-HDNTG 963
Query: 407 ITVGERLLSTLLTEMDGLE 425
+T +R+++ LLT++DG+E
Sbjct: 964 VT--DRVVNQLLTQLDGVE 980
Score = 338 (124.0 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 90/246 (36%), Positives = 128/246 (52%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R +S H K + IGG + + L + I P Y L ++ G+LLYG PGTG
Sbjct: 835 RNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTG 894
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L V RE G + ++V P + K ++G SE+A+R+ FS+A + KP +VF DE
Sbjct: 895 KTLLAGVVARESGMNFISVKGPELLSK-YIGASEQAVRDIFSRAQA----AKPCIVFFDE 949
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
D++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 950 FDSIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 1005
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EILK + + L +VDLE +A + GADL+AL A +
Sbjct: 1006 RLDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLE 1065
Query: 244 AVKRSS 249
A+ S
Sbjct: 1066 AIHNLS 1071
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 385 (140.6 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 99/280 (35%), Positives = 148/280 (52%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC- 77
+ +GG +++L+E++ FP+LY +K + P+G++ YGPPGTGKT + RA+ EC
Sbjct: 391 DQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECR 450
Query: 78 -GAHLTVISPHS---VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
GA+ VGESE+ LR F QA +A+ +PS++F DEID L P R
Sbjct: 451 RGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YAM--RPSIIFFDEIDGLAPVRS 506
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
+++Q I S L LMD VVV+ +TNR+D +DPALRR GRFD
Sbjct: 507 SKQDQIHASIVSTLLALMDG----LDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFS 562
Query: 193 XXXXXXRFEILKLYTKKVPLDANVD--LEAIATSCNGYVGADLEALCREATMSAVK-RSS 249
R +IL ++T K + + L+AIA +GY GADL+ LC EA + ++ R
Sbjct: 563 LPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLRSRYP 622
Query: 250 DANECA-------GVLSVTMEDWRHARSVVGPSITRGVTV 282
C+ + +T E + HA + P+ R +T+
Sbjct: 623 HIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTI 662
Score = 180 (68.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 53/178 (29%), Positives = 85/178 (47%)
Query: 260 VTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
+ M+ R + G S ++V+ V ++ +GGL + L++ V +P+ + F +
Sbjct: 362 ILMDRMRKTDAGQGASDIDPMSVD-SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKF 420
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXX-----XXXXXXXXXXGAELYSMYVGESEALLRN 374
I+P +G + +GPPG GA+ S +VGESE LR
Sbjct: 421 RINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRL 480
Query: 375 TFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
F +A PSIIFFDE D + R SS + ++STLL MDGL+ + +V++
Sbjct: 481 LFDQAYAMRPSIIFFDEIDGLAPVR---SSKQDQIHASIVSTLLALMDGLDGRGEVVV 535
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 385 (140.6 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 99/280 (35%), Positives = 148/280 (52%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC- 77
+ +GG +++L+E++ FP+LY +K + P+G++ YGPPGTGKT + RA+ EC
Sbjct: 391 DQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECR 450
Query: 78 -GAHLTVISPHS---VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
GA+ VGESE+ LR F QA +A+ +PS++F DEID L P R
Sbjct: 451 RGANKVAFFMRKGADCLSKWVGESERQLRLLFDQA--YAM--RPSIIFFDEIDGLAPVRS 506
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
+++Q I S L LMD VVV+ +TNR+D +DPALRR GRFD
Sbjct: 507 SKQDQIHASIVSTLLALMDG----LDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFS 562
Query: 193 XXXXXXRFEILKLYTKKVPLDANVD--LEAIATSCNGYVGADLEALCREATMSAVK-RSS 249
R +IL ++T K + + L+AIA +GY GADL+ LC EA + ++ R
Sbjct: 563 LPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLRSRYP 622
Query: 250 DANECA-------GVLSVTMEDWRHARSVVGPSITRGVTV 282
C+ + +T E + HA + P+ R +T+
Sbjct: 623 HIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTI 662
Score = 180 (68.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 53/178 (29%), Positives = 85/178 (47%)
Query: 260 VTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
+ M+ R + G S ++V+ V ++ +GGL + L++ V +P+ + F +
Sbjct: 362 ILMDRMRKTDAGQGASDIDPMSVD-SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKF 420
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXX-----XXXXXXXXXXGAELYSMYVGESEALLRN 374
I+P +G + +GPPG GA+ S +VGESE LR
Sbjct: 421 RINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRL 480
Query: 375 TFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
F +A PSIIFFDE D + R SS + ++STLL MDGL+ + +V++
Sbjct: 481 LFDQAYAMRPSIIFFDEIDGLAPVR---SSKQDQIHASIVSTLLALMDGLDGRGEVVV 535
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 369 (135.0 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 103/278 (37%), Positives = 144/278 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVV---REC 77
IGG + L+E++ FPLLY + PRG+LL GPPGTGKT + RA+ +
Sbjct: 383 IGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAASKA 442
Query: 78 GAHLTVISPHS--VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
G ++ V VGE+E+ L+ F +A + +PS++F DEID L P R +
Sbjct: 443 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRN----QPSIIFFDEIDGLAPVRSSK 498
Query: 136 REQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+EQ I S L LMD S VV++ +TNRVDAID ALRR GRFD
Sbjct: 499 QEQIHNSIVSTLLALMDG----LDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLP 554
Query: 195 XXXXRFEILKLYTKKVPLDANVDL-EAIATSCNGYVGADLEALCREATMSAVKR------ 247
R EIL ++T+K +L E +A +C GY GADL+ALC EA + A +
Sbjct: 555 GCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKYPQVY 614
Query: 248 SSDANEC--AGVLSVTMEDWRHARSVVGPSITRGVTVE 283
+SD G+++V + A S + P+ RG V+
Sbjct: 615 TSDDKYAIDVGLVNVEKSHFVEAMSAITPAAHRGSVVQ 652
Score = 194 (73.4 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 273 GPSITRGVTVE---IPK-VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGAL 328
GPS G ++ I + + ++DIGGL + L++ V +P+ + F+ I+P RG L
Sbjct: 360 GPSSKGGADIQPLQINEDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVL 419
Query: 329 LHGPPGCXXXXXXXXXXXXXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAA 383
L GPPG GA++ S +VGE+E L+ F+ A+
Sbjct: 420 LCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQ 479
Query: 384 PSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
PSIIFFDE D + R SS + ++STLL MDGL+ + +V++
Sbjct: 480 PSIIFFDEIDGLAPVR---SSKQEQIHNSIVSTLLALMDGLDSRGQVVL 525
Score = 38 (18.4 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 369 EALLRNTFQRARLAAPSIIF 388
EAL+ + F AR PSI++
Sbjct: 753 EALV-HIFSEARRTTPSILY 771
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 377 (137.8 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 131/434 (30%), Positives = 201/434 (46%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ E + W + G + + VE L +I P L S L LK +LL GP G+GK
Sbjct: 518 VLPEASSFWTSLSPPGLS-STVEKLITIIQ-PHLNEST---LILKRGCSILLMGPNGSGK 572
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
+ VRAV R HL + ++ SE ++ F +A H P ++ + +
Sbjct: 573 FTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAELH----HPCLLLLRNLQ 628
Query: 127 ALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
L RD E D R+A+ L L+ + S VVVV S + + + + F
Sbjct: 629 LLGQSRDGA-ETDCRVAATLCQLIAAVHTS------VVVVGSVSSQHELPSDVMAA--FV 679
Query: 187 XXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +L ++ + L +V+L IA G+V DL AL A +A +
Sbjct: 680 HQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIAKQTAGFVLGDLCALLTNAGKAAHR 739
Query: 247 RS---------SDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-EIPKVTWEDIG 293
R S+ E C +SVT ED+ A V+ + ++ + +IP V+W+D+G
Sbjct: 740 RLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEAHSQAIGAPKIPAVSWQDVG 799
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL+ +KK++ ++ P++H S LG+ G LL+GPPG
Sbjct: 800 GLQQVKKEILDTIQLPLEHPELLS-LGLRR-SGLLLYGPPGTGKTLLAKAVATECTMTFL 857
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL +MYVG+SE +R +AR AAP IIFFDE D + RG S + V +R+
Sbjct: 858 SVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHSGDSG-GVMDRV 916
Query: 414 LSTLLTEMDGLEQA 427
+S LL E+DGL +
Sbjct: 917 VSQLLAELDGLHSS 930
Score = 337 (123.7 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 99/268 (36%), Positives = 142/268 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG-A 79
+GG + + + + I PL + + LGL+ GLLLYGPPGTGKT L +AV EC
Sbjct: 798 VGGLQQVKKEILDTIQLPLEHP-ELLSLGLR-RSGLLLYGPPGTGKTLLAKAVATECTMT 855
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L+V P ++ +VG+SE+ +R Q SS A S P ++F DE+D+L P R H +
Sbjct: 856 FLSVKGPELINM-YVGQSEENIR----QVSSKARSAAPCIIFFDELDSLAPNRGHSGDSG 910
Query: 140 V---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ SQL +D S V V+ +TNR D +D +L R GRFD
Sbjct: 911 GVMDRVVSQLLAELDGLHSSGD----VFVIGATNRPDLLDQSLLRPGRFDKLVYVGINED 966
Query: 197 X-XRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRS-SDANE 253
+ ++LK +K +DA+V L I SC + GADL +LC +A M AVKR S E
Sbjct: 967 RESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKISRITE 1026
Query: 254 CAG--VLSVTM--EDWRHARSVVGPSIT 277
+ S+T+ ED+ A S + PS++
Sbjct: 1027 GVDSELSSLTLCSEDFSEALSGLQPSVS 1054
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 80/231 (34%), Positives = 126/231 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + +RE++ P+L +++G+K P+G+LLYGPPGTGKT L RA+ +
Sbjct: 139 IGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCN 198
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQD 139
I ++ ++GES + +RE F+ A H +P ++F+DEIDA+ RR D
Sbjct: 199 FMRIVVSAIVDKYIGESARIIREMFNYAKEH----QPCIIFMDEIDAIGGRRFSQGTSAD 254
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
I L L++ + + +V ++ +TNR D +DPAL R GR D R
Sbjct: 255 REIQRTLMELLN-HLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
EILK++ K+ ++D E++ C+G+ GADL +C EA M A++ D
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
Score = 201 (75.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 43/141 (30%), Positives = 69/141 (48%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KV + IGGL + +++++ VE PI + + R+GI +G LL+GPPG
Sbjct: 133 KVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMA 192
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ + Y+GES ++R F A+ P IIF DE D +G +R ++
Sbjct: 193 SNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTS 252
Query: 406 SITVGERLLSTLLTEMDGLEQ 426
+ +R L LL +DG E+
Sbjct: 253 ADREIQRTLMELLNHLDGFEE 273
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 80/231 (34%), Positives = 126/231 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + +RE++ P+L +++G+K P+G+LLYGPPGTGKT L RA+ +
Sbjct: 139 IGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCN 198
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQD 139
I ++ ++GES + +RE F+ A H +P ++F+DEIDA+ RR D
Sbjct: 199 FMRIVVSAIVDKYIGESARIIREMFNYAKEH----QPCIIFMDEIDAIGGRRFSQGTSAD 254
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
I L L++ + + +V ++ +TNR D +DPAL R GR D R
Sbjct: 255 REIQRTLMELLN-HLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
EILK++ K+ ++D E++ C+G+ GADL +C EA M A++ D
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
Score = 201 (75.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 43/141 (30%), Positives = 69/141 (48%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KV + IGGL + +++++ VE PI + + R+GI +G LL+GPPG
Sbjct: 133 KVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMA 192
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ + Y+GES ++R F A+ P IIF DE D +G +R ++
Sbjct: 193 SNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTS 252
Query: 406 SITVGERLLSTLLTEMDGLEQ 426
+ +R L LL +DG E+
Sbjct: 253 ADREIQRTLMELLNHLDGFEE 273
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 271 (100.5 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 63/185 (34%), Positives = 95/185 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + E + +P Y + K ++ P+G+LLYGPPG KT +A+ E +
Sbjct: 837 IGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMN 896
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QD 139
+ + +VGESEK++R F +A + P V+F DEID++ R++ +
Sbjct: 897 FISVKGPEIFSKYVGESEKSIRNIFKKAREN----HPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ QL +D K +V+++A+TNR D IDPAL R GRFD R
Sbjct: 953 NRVLCQLLNEIDGIKNRL----NVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR 1008
Query: 200 FEILK 204
F ILK
Sbjct: 1009 FAILK 1013
Score = 259 (96.2 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 56/165 (33%), Positives = 88/165 (53%)
Query: 268 ARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
A V PS + + ++IPK ++DIGG + +K+ + + + +P K+ + + I +G
Sbjct: 813 ALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGI 872
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSII 387
LL+GPPGC G E++S YVGESE +RN F++AR P +I
Sbjct: 873 LLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVI 932
Query: 388 FFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
FFDE D + R + + V R+L LL E+DG++ + VII
Sbjct: 933 FFDEIDSIAVNRNNNQNF---VSNRVLCQLLNEIDGIKNRLNVII 974
Score = 136 (52.9 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
K +++FIDEI+ LC +R+ ++ S L MD K H +++ +TN ++ I
Sbjct: 555 KCTIIFIDEIEILCKKREENNNMNI-YTSVLLNNMDGIKKHT----HTILIGATNYINKI 609
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL-DANVD---LEAIATSCNGYVGA 231
D ALRRSGRFD R I + KK+ L N+ + +A C + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISI---FQKKLNLIKHNIGKKKIHKLADLCQSFTCS 666
Query: 232 DLEAL 236
D+ +L
Sbjct: 667 DINSL 671
Score = 84 (34.6 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
+++ EK K +GG E + I PL+Y + +G+LL+GPPG G
Sbjct: 412 KMVVNKKEK-KGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCG 470
Query: 66 KTSLVRAVVRE 76
KT + + E
Sbjct: 471 KTYIALLIKEE 481
Score = 52 (23.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 221 IATSCNGYVGADLEALCREATMSAVKRS 248
+A Y GA++ +CREA++ A++++
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQT 1140
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 271 (100.5 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 63/185 (34%), Positives = 95/185 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + E + +P Y + K ++ P+G+LLYGPPG KT +A+ E +
Sbjct: 837 IGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMN 896
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QD 139
+ + +VGESEK++R F +A + P V+F DEID++ R++ +
Sbjct: 897 FISVKGPEIFSKYVGESEKSIRNIFKKAREN----HPCVIFFDEIDSIAVNRNNNQNFVS 952
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R+ QL +D K +V+++A+TNR D IDPAL R GRFD R
Sbjct: 953 NRVLCQLLNEIDGIKNRL----NVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSR 1008
Query: 200 FEILK 204
F ILK
Sbjct: 1009 FAILK 1013
Score = 259 (96.2 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 56/165 (33%), Positives = 88/165 (53%)
Query: 268 ARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGA 327
A V PS + + ++IPK ++DIGG + +K+ + + + +P K+ + + I +G
Sbjct: 813 ALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGI 872
Query: 328 LLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSII 387
LL+GPPGC G E++S YVGESE +RN F++AR P +I
Sbjct: 873 LLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVI 932
Query: 388 FFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
FFDE D + R + + V R+L LL E+DG++ + VII
Sbjct: 933 FFDEIDSIAVNRNNNQNF---VSNRVLCQLLNEIDGIKNRLNVII 974
Score = 136 (52.9 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 38/125 (30%), Positives = 61/125 (48%)
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
K +++FIDEI+ LC +R+ ++ S L MD K H +++ +TN ++ I
Sbjct: 555 KCTIIFIDEIEILCKKREENNNMNI-YTSVLLNNMDGIKKHT----HTILIGATNYINKI 609
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL-DANVD---LEAIATSCNGYVGA 231
D ALRRSGRFD R I + KK+ L N+ + +A C + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISI---FQKKLNLIKHNIGKKKIHKLADLCQSFTCS 666
Query: 232 DLEAL 236
D+ +L
Sbjct: 667 DINSL 671
Score = 84 (34.6 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
+++ EK K +GG E + I PL+Y + +G+LL+GPPG G
Sbjct: 412 KMVVNKKEK-KGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCG 470
Query: 66 KTSLVRAVVRE 76
KT + + E
Sbjct: 471 KTYIALLIKEE 481
Score = 52 (23.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 221 IATSCNGYVGADLEALCREATMSAVKRS 248
+A Y GA++ +CREA++ A++++
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQT 1140
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 87/232 (37%), Positives = 125/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE++ PL+ ++G+K P+G+LLYGPPGTGKT L RA+ A+
Sbjct: 139 IGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEAN 198
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F A H +P V+F+DEIDA+ RR
Sbjct: 199 FLKVVSSAIVDK-YIGESARVIREMFGYARDH----QPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 254 DREIQRTLMELLNQMDGFDT-LSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAG 312
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R ++LK++ + +VD EAIA +G+ ADL +C EA M A++ D
Sbjct: 313 RVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERD 364
Score = 209 (78.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 52/164 (31%), Positives = 81/164 (49%)
Query: 272 VGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLH 330
V P I +T E P V++ +IGGL + ++L++ VE P+ F R+GI +G LL+
Sbjct: 119 VDPIIFN-MTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLY 177
Query: 331 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFD 390
GPPG + + Y+GES ++R F AR P +IF D
Sbjct: 178 GPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMD 237
Query: 391 EADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
E D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 238 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIM 281
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 373 (136.4 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 109/377 (28%), Positives = 179/377 (47%)
Query: 57 LLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGK 116
LL+G P TGKT V V A + IS + A E L + F Q + +
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-DMFVQ---NVVKSP 481
Query: 117 PSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPS-KTSVPHVVVVASTNRVDAI 175
+++F+ ++D L D E ++ S+ ++ S K+ +V+ + + ++ I
Sbjct: 482 CAIIFVKDLDVLSISSD---EGNIVPGSKSIQILLSKIDLVKSPQGRYIVIGTCHSIEKI 538
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
+ F+ R E+LK+Y V +D + L+ +A N +LE
Sbjct: 539 PYEILSESFFELKFSELEMDE--RLELLKIYANNVIIDKRISLKDVALKTNSMSFGELEC 596
Query: 236 LCREATMSAV---KRSSDANECAGVLS---VTMEDWRHARSVVGPSITRGVTVEIPKVTW 289
L T +AV KR+ N+ +LS +T +D + + + + + +PKV W
Sbjct: 597 LPDHMTKAAVDRIKRTGYDNDSI-ILSGPIITEQDVDVSINRIRKEKSNTIFT-VPKVNW 654
Query: 290 EDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXX 349
+DIGGL + K L+ ++ P++ FS+ G+ P G LL+GPPG
Sbjct: 655 DDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELS 713
Query: 350 XXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITV 409
G EL +MYVGESEA +RN F++AR ++P +IFFDE D + RG SS + V
Sbjct: 714 LEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG-NV 772
Query: 410 GERLLSTLLTEMDGLEQ 426
+R++S LL E+D + +
Sbjct: 773 MDRVVSQLLAELDSISK 789
Score = 361 (132.1 bits), Expect = 5.6e-32, P = 5.6e-32
Identities = 93/255 (36%), Positives = 135/255 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPR-GLLLYG 60
E I + W + IGG A LR+ + PL + + GLK PR G+LLYG
Sbjct: 641 EKSNTIFTVPKVNW---DDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLK-PRSGVLLYG 695
Query: 61 PPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PPGTGKT L +AV E I + +VGESE +R F +A + + P V+
Sbjct: 696 PPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSS----PCVI 751
Query: 121 FIDEIDALCPRRDHRREQ-DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDP 177
F DE+D++ P R + + +V R+ SQL +DS SK + +V V+ +TNR D +DP
Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSI--SKDNNKYVFVIGATNRPDLLDP 809
Query: 178 ALRRSGRFDXXXXXXXXXXX-XRFEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEA 235
+L R GRFD + +L+ TK LD +DL IA +C+ + GAD+ A
Sbjct: 810 SLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYA 869
Query: 236 LCREATMSAVKRSSD 250
LC +A +SA+KR ++
Sbjct: 870 LCSDAVLSAIKRKTN 884
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 88/254 (34%), Positives = 141/254 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG ++ L E I P+ + Q +KLG++ P+G+LLYGP
Sbjct: 153 DSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGP 212
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RA + A L + P V + +G+ K +R+AF A + P ++
Sbjct: 213 PGTGKTLMARACAAQTNATFLKLAGPQLV-QMFIGDGAKLVRDAFLLAKEKS----PCII 267
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDEIDA+ +R D D + + L++ +S + V+A+TNR D +DPAL
Sbjct: 268 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ-LDGFSSDDRIKVIAATNRADILDPAL 326
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R IL+++++K+ ++A+V+ E +A S + + GA L+A+C E
Sbjct: 327 MRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVE 386
Query: 240 ATMSAVKRSSDANE 253
A M A++R DA E
Sbjct: 387 AGMLALRR--DATE 398
Score = 224 (83.9 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 50/151 (33%), Positives = 75/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F +LGI P +G LL+GPPG
Sbjct: 163 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMAR 222
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ +P IIF DE D +G KR S
Sbjct: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS 282
Query: 403 SSTSITVGERLLSTLLTEMDGL---EQAKVI 430
+ +R + LL ++DG ++ KVI
Sbjct: 283 EVSGDREVQRTMLELLNQLDGFSSDDRIKVI 313
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 88/229 (38%), Positives = 125/229 (54%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
AIGG + LRE+I PLL ++G+ P+G LLYGPPGTGKT L RAV + A
Sbjct: 142 AIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDA 201
Query: 80 H-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+ L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 202 NFLKVVSSAIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTS 256
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D I L L++ S+ V ++ +TNR D++DPAL R GR D
Sbjct: 257 ADREIQRTLMELLNQ-MDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQ 315
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK++ K+ +D EAI + + GADL +C EA + A++
Sbjct: 316 ARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIR 364
Score = 228 (85.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/199 (30%), Positives = 95/199 (47%)
Query: 237 CREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGL 295
CR + K S + ++T+ R+ V P + ++ E P VT+ IGGL
Sbjct: 91 CRRQ-LDKAKLKSGTRVALDMTTLTI--MRYLPREVDP-LVYNMSHEDPGDVTYSAIGGL 146
Query: 296 RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXX 355
D ++L++ +E P+ + F R+GI+P +G LL+GPPG
Sbjct: 147 TDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKV 206
Query: 356 XGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLS 415
+ + Y+GES L+R F AR P IIF DE D +G +R +++ +R L
Sbjct: 207 VSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 266
Query: 416 TLLTEMDGLE---QAKVII 431
LL +MDG + Q K+I+
Sbjct: 267 ELLNQMDGFDSLGQVKMIM 285
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 371 (135.7 bits), Expect = 7.4e-33, P = 7.4e-33
Identities = 89/237 (37%), Positives = 131/237 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E++GG + L+E++ PLLY Q+ ++ PRG+L +GPPGTGKT + RA+ C
Sbjct: 266 ESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACS 325
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
+ +S + A VGE+E+ LR F +A S +PS++F DEID L P R
Sbjct: 326 SENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKST----QPSIIFFDEIDGLAPVRS 381
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
++EQ I S L LMD + S V+++ +TNR DA+DPALRR GRFD
Sbjct: 382 SKQEQIHASIVSTLLALMDGME----SRGQVIIIGATNRPDAVDPALRRPGRFDREFYFP 437
Query: 193 XXXXXXRFEILKLYTKKV-PLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R +I++++T+ P +A GY GADL ALC EA ++++KR+
Sbjct: 438 LPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRT 494
Score = 201 (75.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/151 (34%), Positives = 75/151 (49%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+++E +GGL + +L++ V P+ + F R + P RG L HGPPG
Sbjct: 263 LSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAA 322
Query: 347 XXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
GA+ S +VGE+E LR F+ A+ PSIIFFDE D + R
Sbjct: 323 ACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVR-- 380
Query: 402 SSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SS + ++STLL MDG+E + +VII
Sbjct: 381 -SSKQEQIHASIVSTLLALMDGMESRGQVII 410
>DICTYBASE|DDB_G0281521 [details] [associations]
symbol:DDB_G0281521 "BRAT group protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 dictyBase:DDB_G0281521 GO:GO:0005524
EMBL:AAFI02000041 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 RefSeq:XP_640671.1 ProteinModelPortal:Q54TZ0
EnsemblProtists:DDB0220704 GeneID:8623056 KEGG:ddi:DDB_G0281521
InParanoid:Q54TZ0 OMA:FPEYYEL ProtClustDB:CLSZ2846786
Uniprot:Q54TZ0
Length = 1800
Score = 366 (133.9 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 88/234 (37%), Positives = 130/234 (55%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-- 77
+IGG ++ L+E++ PLLY K ++ P+G+L YGPPGTGKT L RA+V EC
Sbjct: 740 SIGGLDKHIQLLKEMLMLPLLYPEVFNKFKIQPPKGVLFYGPPGTGKTLLARALVNECNV 799
Query: 78 -GAHLTVISPHSVH--KAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH 134
G ++ VGE+E+ LR F QA + +PS++F DEID L P R
Sbjct: 800 GGQKVSFFMRKGADCLSKWVGEAERQLRLLFEQAKAM----QPSIIFFDEIDGLAPVRSS 855
Query: 135 RREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
R++Q I S L LMD + V+V+ +TNR+D+IDPALRR GRFD
Sbjct: 856 RQDQIHNSIVSTLLALMDG----LDNRGQVIVIGATNRIDSIDPALRRPGRFDRELLFTL 911
Query: 194 XXXXXRFEILKLYTKK-VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R IL ++T+ +P ++ L I+ GY GAD+++LC E+ + +++
Sbjct: 912 PSKEARHRILTIHTENWLPKPSSQLLLEISDQLAGYCGADIKSLCSESVLCSLR 965
Score = 179 (68.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 49/152 (32%), Positives = 75/152 (49%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
K+ + IGGL + L++ + P+ + F++ I P +G L +GPPG
Sbjct: 735 KIGFSSIGGLDKHIQLLKEMLMLPLLYPEVFNKFKIQPPKGVLFYGPPGTGKTLLARALV 794
Query: 346 XX-----XXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRG 400
GA+ S +VGE+E LR F++A+ PSIIFFDE D + R
Sbjct: 795 NECNVGGQKVSFFMRKGADCLSKWVGEAERQLRLLFEQAKAMQPSIIFFDEIDGLAPVR- 853
Query: 401 GSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SS + ++STLL MDGL+ + +VI+
Sbjct: 854 --SSRQDQIHNSIVSTLLALMDGLDNRGQVIV 883
Score = 38 (18.4 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
E+ +R A+ A+PSII+ D + + G+ S
Sbjct: 1149 ESCIR-ILSEAKKASPSIIYIPNIDCWVSNQFGNLS 1183
Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 85 SPHSVHKAHVGESEKALREAFSQASSH 111
+PH H+ H + + A ++ S +SSH
Sbjct: 614 NPHQQHQQHQ-QQQPA--QSSSSSSSH 637
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/254 (34%), Positives = 139/254 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG ++ L E I P+ + + +KLG++ P+G+LLYGP
Sbjct: 154 DSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGP 213
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RA + A L + P V + +G+ K +R+AF A A P ++
Sbjct: 214 PGTGKTLMARACAAQTNATFLKLAGPQLV-QMFIGDGAKLVRDAFQLAKEKA----PCII 268
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDEIDA+ +R D D + + L++ +S + V+A+TNR D +DPAL
Sbjct: 269 FIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ-LDGFSSDERIKVIAATNRADILDPAL 327
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R IL+++++K+ + +V+ E +A S + + GA L+A+C E
Sbjct: 328 MRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVE 387
Query: 240 ATMSAVKRSSDANE 253
A M A++R DA E
Sbjct: 388 AGMLALRR--DATE 399
Score = 236 (88.1 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 52/151 (34%), Positives = 76/151 (50%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F +LG+ P +G LL+GPPG
Sbjct: 164 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMAR 223
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ FQ A+ AP IIF DE D +G KR S
Sbjct: 224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS 283
Query: 403 SSTSITVGERLLSTLLTEMDGL---EQAKVI 430
+ +R + LL ++DG E+ KVI
Sbjct: 284 EVSGDREVQRTMLELLNQLDGFSSDERIKVI 314
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360
Score = 221 (82.9 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 141 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 200
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 201 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 256 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 315 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 366
Score = 221 (82.9 bits), Expect = 8.7e-16, P = 8.7e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 110 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 168
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 169 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 228
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 229 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 283
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360
Score = 221 (82.9 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 149 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 208
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 209 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 264 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 374
Score = 221 (82.9 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 118 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 176
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 177 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 236
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 237 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 291
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360
Score = 221 (82.9 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360
Score = 221 (82.9 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 127 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 186
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 187 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 241
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 242 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 301 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 352
Score = 221 (82.9 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 96 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 154
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 155 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 214
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 215 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 269
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 149 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 208
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 209 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 264 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 374
Score = 221 (82.9 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 118 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 176
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 177 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 236
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 237 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 291
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 149 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 208
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 209 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 264 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 374
Score = 220 (82.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 118 TLTIMRYLPREVDP-LVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 176
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 177 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 236
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 237 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 291
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD 360
Score = 220 (82.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 83/233 (35%), Positives = 123/233 (52%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
A+GG + LRE I PL+ ++G+K P+G+LLYGPPGTGKT L RA+ A
Sbjct: 141 AVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 200
Query: 80 H-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+ L ++S + K ++GES + +RE F A H +P ++F+DEIDA+ RR
Sbjct: 201 NFLKIVSSAIIDK-YIGESARLIREMFGYARDH----QPCIIFMDEIDAIGGRRFSEGTS 255
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D I L L++ + V ++ +TNR D +DPAL R GR D
Sbjct: 256 ADREIQRTLMELLNQ-LDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 314
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R E+LK++ + +D EA+ G+ GADL +C EA M+A++ D
Sbjct: 315 ARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERD 367
Score = 215 (80.7 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V++ +GGL D ++L++++E P+ + F R+GI P +G LL+GPPG
Sbjct: 137 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 196
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ + Y+GES L+R F AR P IIF DE D +G +R +++
Sbjct: 197 NIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 256
Query: 407 ITVGERLLSTLLTEMDGLEQ 426
+R L LL ++DG ++
Sbjct: 257 DREIQRTLMELLNQLDGFDE 276
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 84/228 (36%), Positives = 124/228 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + LRE++ PL+ +++G+ P+G LL+GPPGTGKT L RAV + +
Sbjct: 152 VGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCN 211
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P +VF+DEIDA+ RR
Sbjct: 212 FLKVVSSAIVDK-YIGESARMIREMFNYARDH----QPCIVFMDEIDAIGGRRFSEGTSA 266
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ S+ V V+ +TNR D +DPAL R GR D
Sbjct: 267 DREIQRTLMELLNQ-LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK+++ K+ +D EA+ +G+ ADL +C EA M A++
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIR 373
Score = 215 (80.7 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R V P + + ++ E P +++ D+GGL + ++L++ VE P+ + F R+
Sbjct: 121 TLTIMRQLPREVDPLVYK-MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRV 179
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI+P +G LL GPPG + + Y+GES ++R F A
Sbjct: 180 GITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYA 239
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
R P I+F DE D +G +R +++ +R L LL ++DG + + KVI+
Sbjct: 240 RDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIM 294
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 84/228 (36%), Positives = 124/228 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + LRE++ PL+ +++G+ P+G LL+GPPGTGKT L RAV + +
Sbjct: 152 VGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCN 211
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P +VF+DEIDA+ RR
Sbjct: 212 FLKVVSSAIVDK-YIGESARMIREMFNYARDH----QPCIVFMDEIDAIGGRRFSEGTSA 266
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ S+ V V+ +TNR D +DPAL R GR D
Sbjct: 267 DREIQRTLMELLNQ-LDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK+++ K+ +D EA+ +G+ ADL +C EA M A++
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIR 373
Score = 215 (80.7 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 51/175 (29%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R V P + + ++ E P +++ D+GGL + ++L++ VE P+ + F R+
Sbjct: 121 TLTIMRQLPREVDPLVYK-MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRV 179
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI+P +G LL GPPG + + Y+GES ++R F A
Sbjct: 180 GITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYA 239
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
R P I+F DE D +G +R +++ +R L LL ++DG + + KVI+
Sbjct: 240 RDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIM 294
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 368 (134.6 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 126/432 (29%), Positives = 209/432 (48%)
Query: 20 AIGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAV 73
++GG + +V A+ E IT LL S Q L GL+ LL+ G G+GK++L +A+
Sbjct: 555 SLGGVSSLSVSAM-EHITHSLLGRPLSRQLMALVAGLR-NGALLITGGKGSGKSTLAKAI 612
Query: 74 VREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+E AH+ ++ ++ + +KAL AFS+A+ +PSV+ +D++D +
Sbjct: 613 CKEAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSEAAWR----QPSVILLDDLDLIA 668
Query: 130 -----PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RR 181
P +H E Q R+A L ++ S S+ V ++A++ ++ P+L
Sbjct: 669 GLPSTPEHEHSPEAVQSQRLAHALNNMI-KEFVSMGSL--VALIATSQLQHSLHPSLVSA 725
Query: 182 SG--RFDXXXXXXXXXXXXRFEILKLYTK-KVPLDAN----VDLEAIATSCNGYVGADLE 234
G F R EIL K K+ D + +DL+ IA +V D
Sbjct: 726 QGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFT 785
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIG 293
L A S++ R + G L++T D++ A P+ R V + P+ + W+ IG
Sbjct: 786 VLVDRAIHSSLSRQQNPTR-EG-LTLTTADFQKALRGFLPASLRNVNLHKPRDLGWDKIG 843
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 844 GLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFI 903
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 904 SIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 960
Query: 414 LSTLLTEMDGLE 425
++ LLT++DG+E
Sbjct: 961 VNQLLTQLDGVE 972
Score = 336 (123.3 bits), Expect = 4.5e-29, P = 4.5e-29
Identities = 84/243 (34%), Positives = 130/243 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 827 RNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 886
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L V RE G + +++ P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 887 KTLLAGVVARESGMNFISIQGPELLSK-YIGASEQAVRDVFIRAQA----AKPCILFFDE 941
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 942 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 997
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + +K +PL +VDL+ +A+ + GADL+AL A +
Sbjct: 998 RLDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVASVTESFTGADLKALLYNAQLE 1057
Query: 244 AVK 246
A++
Sbjct: 1058 ALQ 1060
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 79/233 (33%), Positives = 129/233 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 145 EMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTD 204
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 205 CKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRSDSSGG 260
Query: 137 --EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
+ +V R +L +D + +K ++ V+ +TNR+D +DPAL R GR D
Sbjct: 261 SGDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDPALLRPGRIDRKIEFPP 316
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EIL+++++ + L +DL++IA NG GA+L+ +C EA M A++
Sbjct: 317 PSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALR 369
Score = 253 (94.1 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 57/160 (35%), Positives = 82/160 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + +IP T+E +GGL K++++ +E P+KH F LGI +G LL+G
Sbjct: 127 VDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYG 186
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+GE ++R F AR APSIIF DE
Sbjct: 187 PPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 246
Query: 392 ADVVGAKRGGSSSTS-ITVGERLLSTLLTEMDGLEQAKVI 430
D +G+ R SS S + +R + LL ++DG E K I
Sbjct: 247 IDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNI 286
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 86/233 (36%), Positives = 123/233 (52%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
A+GG + LRE I PL+ ++G+K P+G+LLYGPPGTGKT L RA+ A
Sbjct: 140 AVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 199
Query: 80 H-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+ L V+S + K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 200 NFLKVVSSAIIDK-YIGESARLIREMFNYAREH----QPCIIFMDEIDAIGGRRFSEGTS 254
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D I L L++ + V ++ +TNR D +DPAL R GR D
Sbjct: 255 ADREIQRTLMELLNQ-LDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R EILK++ + +D EAI G+ GADL +C EA M A++ D
Sbjct: 314 SRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERD 366
Score = 219 (82.2 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+++ +GGL D ++L++++E P+ + F R+GI P +G LL+GPPG
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ + Y+GES L+R F AR P IIF DE D +G +R +++
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 407 ITVGERLLSTLLTEMDGLEQ 426
+R L LL ++DG +Q
Sbjct: 256 DREIQRTLMELLNQLDGFDQ 275
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 85/233 (36%), Positives = 124/233 (53%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
A+GG + LRE I PL+ ++G+K P+G+LLYGPPGTGKT L RA+ A
Sbjct: 140 AVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 199
Query: 80 H-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+ L V+S + K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 200 NFLKVVSSAIIDK-YIGESARLIREMFNYAREH----QPCIIFMDEIDAIGGRRFSEGTS 254
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D I L L++ ++ V ++ +TNR D +DPAL R GR D
Sbjct: 255 ADREIQRTLMELLNQ-LDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ 313
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI G+ GADL +C EA M A++ D
Sbjct: 314 SRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERD 366
Score = 214 (80.4 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
+++ +GGL D ++L++++E P+ + F R+GI P +G LL+GPPG
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ + Y+GES L+R F AR P IIF DE D +G +R +++
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 407 ITVGERLLSTLLTEMDGLE 425
+R L LL ++DG +
Sbjct: 256 DREIQRTLMELLNQLDGFD 274
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK++ + +D EAI +G+ GADL +C EA M A++ D
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHD 360
Score = 221 (82.9 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 86/228 (37%), Positives = 124/228 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+ P+G LLYGPPGTGKT L RAV + +
Sbjct: 135 IGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCN 194
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 195 FLKVVSSSIVDK-YIGESARLIREMFNYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + V ++ +TNR D +DPAL R GR D
Sbjct: 250 DREIQRTLMELLNQMDGFDT-LHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK+++ + ++D EAI +G+ GADL +C EA M A++
Sbjct: 309 RLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
Score = 221 (82.9 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 54/175 (30%), Positives = 87/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + ++ E P V++ +IGGL + ++L++ +E P+ + F R+
Sbjct: 104 TLTIMRYLPREVDP-LVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRV 162
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GI P +G LL+GPPG + + Y+GES L+R F A
Sbjct: 163 GIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDG---LEQAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG L + K+I+
Sbjct: 223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIM 277
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 89/267 (33%), Positives = 148/267 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG +E L E I P+ + + +KLG+K P+G L++GP
Sbjct: 168 DSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGP 227
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + +P V + +G+ K +R+AF+ A + P+++
Sbjct: 228 PGTGKTLLARACAAQSNATFLKLAAPQLV-QMFIGDGAKLVRDAFALAKEKS----PAII 282
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ +S V V+A+TNRVD +DPAL
Sbjct: 283 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ-LDGFSSDDRVKVIAATNRVDTLDPAL 341
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R IL+++++K+ +D +++ E +A S + Y GA L+++C E
Sbjct: 342 LRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVE 401
Query: 240 ATMSAVKRS-SDANE---CAGVLSVTM 262
A M A+++ + N G+L V M
Sbjct: 402 AGMIALRQGDTKINHEHFMDGILEVQM 428
Score = 210 (79.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P++ + F +LG+ P +G L+ GPPG
Sbjct: 178 EKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLAR 237
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
+L M++G+ L+R+ F A+ +P+IIF DE D +G KR S
Sbjct: 238 ACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDS 297
Query: 403 SSTSITVGERLLSTLLTEMDGL---EQAKVI 430
+R + LL ++DG ++ KVI
Sbjct: 298 EKAGDREVQRTMLELLNQLDGFSSDDRVKVI 328
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 78/228 (34%), Positives = 125/228 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG V+ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 179 EMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTD 238
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + ++GE + +RE F A HA PS++F+DEID++ +R
Sbjct: 239 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSQRIEGEHG 294
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + S ++ V+ TNR+D +D AL R GR D
Sbjct: 295 DSEVQRTMMELLNQLDGFE-STQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEA 353
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK++++K+ L +D+ IAT N GA+++A+C EA M A++
Sbjct: 354 RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALR 401
Score = 246 (91.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 55/161 (34%), Positives = 81/161 (50%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ ++P T+E +GGL K++++ +E P+KH F LGIS +G LL
Sbjct: 159 SKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLL 218
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 219 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 278
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
DE D +G++R V +R + LL ++DG E + I
Sbjct: 279 DEIDSIGSQRIEGEHGDSEV-QRTMMELLNQLDGFESTQNI 318
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 78/228 (34%), Positives = 125/228 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG V+ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 179 EMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTD 238
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + ++GE + +RE F A HA PS++F+DEID++ +R
Sbjct: 239 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSQRIEGEHG 294
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + S ++ V+ TNR+D +D AL R GR D
Sbjct: 295 DSEVQRTMMELLNQLDGFE-STQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEA 353
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EILK++++K+ L +D+ IAT N GA+++A+C EA M A++
Sbjct: 354 RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALR 401
Score = 246 (91.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 55/161 (34%), Positives = 81/161 (50%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ ++P T+E +GGL K++++ +E P+KH F LGIS +G LL
Sbjct: 159 SKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLL 218
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 219 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 278
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
DE D +G++R V +R + LL ++DG E + I
Sbjct: 279 DEIDSIGSQRIEGEHGDSEV-QRTMMELLNQLDGFESTQNI 318
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 83/231 (35%), Positives = 132/231 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG +E L E I P+L+ + +K+G+K P+G+L++GPPGTGKT L RA + A
Sbjct: 188 IGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNAT 247
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+AF+ A A P+++FIDE+DA+ +R D
Sbjct: 248 FLKLAGPQLV-QMFIGDGAKMVRDAFNLAKEKA----PAIIFIDELDAIGTKRFDSELSG 302
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ T V V+A+TNR D +DPAL RSGR D
Sbjct: 303 DREVQRTMLELLNQLDGFSTD-DTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEES 361
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R IL+++++K+ + +V+ E +A S + + GA L+A+C EA M A++R +
Sbjct: 362 RARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/152 (32%), Positives = 75/152 (49%)
Query: 282 VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
+E P + DIGGL + L +A+ P+ H F ++GI P +G L+HGPPG
Sbjct: 178 IEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLA 237
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
G +L M++G+ ++R+ F A+ AP+IIF DE D +G KR
Sbjct: 238 RACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 402 SSSTSITVGERLLSTLLTEMDGL---EQAKVI 430
S + +R + LL ++DG + KVI
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVI 329
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 83/231 (35%), Positives = 132/231 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG +E L E I P+L+ + +K+G+K P+G+L++GPPGTGKT L RA + A
Sbjct: 188 IGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNAT 247
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+AF+ A A P+++FIDE+DA+ +R D
Sbjct: 248 FLKLAGPQLV-QMFIGDGAKMVRDAFNLAKEKA----PAIIFIDELDAIGTKRFDSELSG 302
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ T V V+A+TNR D +DPAL RSGR D
Sbjct: 303 DREVQRTMLELLNQLDGFSTD-DTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEES 361
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R IL+++++K+ + +V+ E +A S + + GA L+A+C EA M A++R +
Sbjct: 362 RARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGA 412
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/152 (32%), Positives = 75/152 (49%)
Query: 282 VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXX 341
+E P + DIGGL + L +A+ P+ H F ++GI P +G L+HGPPG
Sbjct: 178 IEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLA 237
Query: 342 XXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
G +L M++G+ ++R+ F A+ AP+IIF DE D +G KR
Sbjct: 238 RACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 402 SSSTSITVGERLLSTLLTEMDGL---EQAKVI 430
S + +R + LL ++DG + KVI
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVI 329
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 365 (133.5 bits), Expect = 3.3e-32, P = 3.3e-32
Identities = 87/232 (37%), Positives = 123/232 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IG + + L P+ YS+ + LG+ G+LLYGPPG GKT L +A+ E A+
Sbjct: 678 IGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKAN 737
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I + +VGESEK +RE FS AS + KP ++F DEID++C R + +
Sbjct: 738 FIAIKGPEILNKYVGESEKKVREIFSYASVY----KPCLIFFDEIDSICINRSNNKSVSA 793
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
R+ +QL + MD + V ++A+TNR D ID AL RSGRFD
Sbjct: 794 SDRVVNQLLSEMDGLSQREG----VYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQG 849
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R +ILK +K +P+D NV E I+ GY GADL + RE+ A++ D
Sbjct: 850 RVDILKKLSKNMPIDKNVRFEEISKLTRGYSGADLYGVLRESAFIALQECRD 901
Score = 253 (94.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 52/144 (36%), Positives = 79/144 (54%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E+P + ++IG L+ +KK L+ P+K+S + LGI+ G LL+GPPGC
Sbjct: 669 EVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAK 728
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G E+ + YVGESE +R F A + P +IFFDE D + R S
Sbjct: 729 AISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINR--S 786
Query: 403 SSTSITVGERLLSTLLTEMDGLEQ 426
++ S++ +R+++ LL+EMDGL Q
Sbjct: 787 NNKSVSASDRVVNQLLSEMDGLSQ 810
Score = 74 (31.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 58 LYGPPGTGKTSLVRAVVRECGAHLTVIS-PHSVHKAHVGESEKALREAFSQASSHALSGK 116
++G GTGKT+L A+ ECG I P + LR F +
Sbjct: 289 IFGTSGTGKTTLSYAIAGECGCPFFYIKLPEYIKYISNDNKNNKLRILFEHIKNEY---D 345
Query: 117 PSVVFIDEIDALCPRRD 133
+++ ID+ID + +D
Sbjct: 346 KAILCIDDIDIIFSSKD 362
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 86/233 (36%), Positives = 125/233 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL Q++G+K P+G+LLYGPPGTGKT L RAV +
Sbjct: 139 IGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETN 198
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F A H +P ++F+DEIDA+ RR
Sbjct: 199 FLKVVSSAIVDK-YIGESARLIREMFGYAKEH----EPCIIFMDEIDAIGGRRFSEGTSA 253
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ + ++ +TNR D +DPAL R+GR D
Sbjct: 254 DREIQRTLMELLNQ-LDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVG 312
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
R EILK+++ V ++ ++D E++ +G GADL + EA + A+K DA
Sbjct: 313 RLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDA 365
Score = 224 (83.9 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 50/164 (30%), Positives = 84/164 (51%)
Query: 272 VGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLH 330
V P + +++E P ++ + IGGL D ++L++ +E P+K+ F R+GI P +G LL+
Sbjct: 119 VDP-LVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLY 177
Query: 331 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFD 390
GPPG + + Y+GES L+R F A+ P IIF D
Sbjct: 178 GPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMD 237
Query: 391 EADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
E D +G +R +++ +R L LL ++DG + + K+I+
Sbjct: 238 EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIM 281
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 83/249 (33%), Positives = 143/249 (57%)
Query: 2 ESKGRIMSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYG 60
+S+ + M E +EK E + IGG ++ L E + P+ + + + +G+K P+G+L+YG
Sbjct: 151 DSRVKAM-EIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYG 209
Query: 61 PPGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSV 119
PPGTGKT L RA + + +L + P V + +G+ K +R+AF+ A P++
Sbjct: 210 PPGTGKTLLARACAAQTNSTYLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKG----PTI 264
Query: 120 VFIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPA 178
+FIDE+DA+ +R D D + + L++ +S ++ V+A+TNR+D +DPA
Sbjct: 265 IFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQ-LDGFSSDANIKVIAATNRIDILDPA 323
Query: 179 LRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCR 238
L RSGR D R IL+++++K+ + A+V+ + +A S + GA L+A+C
Sbjct: 324 LLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCV 383
Query: 239 EATMSAVKR 247
EA M A++R
Sbjct: 384 EAGMIALRR 392
Score = 217 (81.4 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 46/141 (32%), Positives = 69/141 (48%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +AV P+ H F +GI P +G L++GPPG
Sbjct: 161 EKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLAR 220
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ P+IIF DE D +G KR S
Sbjct: 221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS 280
Query: 403 SSTSITVGERLLSTLLTEMDG 423
+ +R + LL ++DG
Sbjct: 281 EVSGDREVQRTMLELLNQLDG 301
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 360 (131.8 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 126/429 (29%), Positives = 203/429 (47%)
Query: 20 AIGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAV 73
++GG N V +L E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 233 SLGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAI 290
Query: 74 VREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+E AH+ + ++ + +K L AFS+A + +PSVV +D++D +
Sbjct: 291 CKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEA----VWMQPSVVLLDDLDLIA 346
Query: 130 --PR-RDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSGR 184
P +H D + +L L D K + V ++A++ ++ P L G
Sbjct: 347 GLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGV 406
Query: 185 --FDXXXXXXXXXXXXRFEIL-KLYTKKVPLDAN----VDLEAIATSCNGYVGADLEALC 237
F R EIL + K+ D N +DL+ +A G+V D L
Sbjct: 407 HIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 466
Query: 238 REATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLR 296
A S + R S + VL+ T++ + R + P+ R V + P+ + W+ IGGL
Sbjct: 467 DRAIHSRLSRQSISTREKLVLT-TLDFQKALRGFL-PASLRSVNLHKPRDLGWDKIGGLH 524
Query: 297 DLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXX 356
++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 525 EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVK 584
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+++
Sbjct: 585 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVVNQ 641
Query: 417 LLTEMDGLE 425
LLT++DG+E
Sbjct: 642 LLTQLDGVE 650
Score = 323 (118.8 bits), Expect = 6.9e-28, P = 6.9e-28
Identities = 82/242 (33%), Positives = 128/242 (52%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 505 RSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 564
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 565 KTLLAGVIARESRMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 619
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 620 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 675
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 676 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLE 735
Query: 244 AV 245
A+
Sbjct: 736 AL 737
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 83/232 (35%), Positives = 121/232 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PL ++G+K P+G+LLYGPPGTGKT L +AV GA+
Sbjct: 174 IGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGAN 233
Query: 81 LTVISPHS-VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ SP S + ++GES + +RE F+ A H +P ++F+DE+DA+ RR
Sbjct: 234 F-IFSPASAIVDKYIGESARLIREMFAYAKEH----EPCIIFMDEVDAIGGRRFSEGTSA 288
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ T + ++ +TNR D +DPAL R+GR D
Sbjct: 289 DREIQRTLMELLNQMDGFDT-LGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R EI K++T KV D EA +G+ GAD+ + EA A++ D
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRD 399
Score = 237 (88.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 51/163 (31%), Positives = 83/163 (50%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P + T E ++++ IGGL + ++L++ +E P+K+ F+R+GI P +G LL+G
Sbjct: 154 VDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYG 213
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG + + Y+GES L+R F A+ P IIF DE
Sbjct: 214 PPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDE 273
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
D +G +R +++ +R L LL +MDG + Q K+I+
Sbjct: 274 VDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIM 316
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 87/232 (37%), Positives = 120/232 (51%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + LRE+I PL ++G+K P+G+LLYGPPGTGKT L RAV G +
Sbjct: 134 VGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVN 193
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F A H +P V+F+DEIDA+ RR
Sbjct: 194 FLKVVSSAIVDK-YIGESARIIREMFGYAKEH----EPCVIFMDEIDAIGGRRFSEGTSA 248
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ + ++ +TNR D +DPAL R GR D
Sbjct: 249 DREIQRTLMELLNQ-MDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVG 307
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R EILK++ +KV +D EA+ +G GADL + EA A+K D
Sbjct: 308 RMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRD 359
Score = 221 (82.9 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 48/164 (29%), Positives = 84/164 (51%)
Query: 272 VGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLH 330
V P + +++E P +++ +GGL + ++L++ +E P+K+ F R+GI P +G LL+
Sbjct: 114 VDP-LVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLY 172
Query: 331 GPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFD 390
GPPG + + Y+GES ++R F A+ P +IF D
Sbjct: 173 GPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMD 232
Query: 391 EADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
E D +G +R +++ +R L LL +MDG + Q K+I+
Sbjct: 233 EIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIM 276
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 326 (119.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 79/254 (31%), Positives = 137/254 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 184 IGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSAT 243
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L ++ + K ++G+ + R+ F A +A PS+VFIDEIDA+ +R D
Sbjct: 244 FLRIVGSELIQK-YLGDGPRLCRQIFKVAGENA----PSIVFIDEIDAIGTKRYDSNSGG 298
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ V V+ +TN+++ +DPAL R GR D
Sbjct: 299 EREIQRTMLELLNQ-LDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLST 357
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+ +IL ++T K+ L +V+LE + T+ + GAD++A+C EA + A++ +
Sbjct: 358 KKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERR--------M 409
Query: 259 SVTMEDWRHARSVV 272
VT ED++ A+ V
Sbjct: 410 QVTAEDFKQAKERV 423
Score = 220 (82.5 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 48/150 (32%), Positives = 75/150 (50%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P ++ DIGGL ++++++VE P+ H + +GI P +G +L+G PG
Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+EL Y+G+ L R F+ A APSI+F DE D +G KR S+S
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296
Query: 405 TSITVGERLLSTLLTEMDGLEQ---AKVII 431
+R + LL ++DG + KVI+
Sbjct: 297 GGEREIQRTMLELLNQLDGFDDRGDVKVIM 326
Score = 38 (18.4 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELI 35
+ EK + EE I GN ++ L E+I
Sbjct: 89 QEEEKKQLEE-IRGNPLSIGTLEEII 113
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/230 (34%), Positives = 126/230 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRR 136
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSG 276
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D + + L++ + S + V+ +TNR+D +D AL R GR D
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
RF+ILK++++K+ L +DL+ IA NG GA+L+A+C EA M A++
Sbjct: 336 ESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
Score = 245 (91.3 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 57/163 (34%), Positives = 82/163 (50%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P + ++P T++ IGGL K++++ +E PIKH F LGI+ +G LL
Sbjct: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 390 DEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
DE D +G+ R GS + V +R + LL ++DG E + I
Sbjct: 261 DEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKI 302
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 79/230 (34%), Positives = 126/230 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRR 136
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSG 276
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D + + L++ + S + V+ +TNR+D +D AL R GR D
Sbjct: 277 NGDSEVQRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
RF+ILK++++K+ L +DL+ IA NG GA+L+A+C EA M A++
Sbjct: 336 ESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
Score = 245 (91.3 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 57/163 (34%), Positives = 82/163 (50%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P + ++P T++ IGGL K++++ +E PIKH F LGI+ +G LL
Sbjct: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
Query: 390 DEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
DE D +G+ R GS + V +R + LL ++DG E + I
Sbjct: 261 DEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKI 302
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 83/234 (35%), Positives = 121/234 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG + LRE+I PL Q++G+K P+G+LLYGPPGTGKT L +AV G
Sbjct: 181 DGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIG 240
Query: 79 AHLTVISPHS-VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR 136
A+ + SP S + ++GES + +RE F+ A H +P ++F+DE+DA+ RR
Sbjct: 241 ANF-IFSPASGIVDKYIGESARIIREMFAYAKEH----EPCIIFMDEVDAIGGRRFSEGT 295
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D I L L+ + ++ ++ +TNR D +DPAL R GR D
Sbjct: 296 SADREIQRTLMELL-TQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNE 354
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD 250
R EI K++T KV D EA +G+ GAD+ EA A++ D
Sbjct: 355 AGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRD 408
Score = 237 (88.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 50/161 (31%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P + + E ++T++ IGGL + ++L++ +E P+K+ F R+GI P +G LL+GPP
Sbjct: 165 PLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPP 224
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G + + Y+GES ++R F A+ P IIF DE D
Sbjct: 225 GTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVD 284
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
+G +R +++ +R L LLT+MDG + Q K+I+
Sbjct: 285 AIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIM 325
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 358 (131.1 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 103/287 (35%), Positives = 151/287 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPR-GLLLYGPPGTGKTSLVRAVVRECG- 78
IGG + ++ I PL + +G R G+LLYGPPGTGKT + +AV EC
Sbjct: 618 IGGLAKLKDEIQSSIGLPLKH---VHLMGKNLRRSGILLYGPPGTGKTLVAKAVATECNL 674
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR----DH 134
+ L+V P ++ +VG+SE+ +RE FS+A S A P V+F+DE+D+L P R D
Sbjct: 675 SFLSVQGPELLNM-YVGQSEQNVREVFSRARSAA----PCVLFLDELDSLAPNRGVAGDS 729
Query: 135 RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX- 193
D R+ SQL MD TS P + ++A+TNR D IDPAL R GRFD
Sbjct: 730 GGVMD-RVVSQLLAEMDGMSDGDTSKP-IFILAATNRPDLIDPALLRPGRFDKLFYVGPC 787
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYV-GADLEALCREATMSAVKRSSDAN 252
+ +L+ T++ LDA VD+E IA + GADL ++C A +SAV+R+ D +
Sbjct: 788 STAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTIDGH 847
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
+G +S E V T+ +P ++ +D+ +LK
Sbjct: 848 -LSGTIS-EKELVPENVIVQEEDFTKSFNKFVPSISAKDLEYFNNLK 892
Score = 248 (92.4 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 69/211 (32%), Positives = 103/211 (48%)
Query: 215 NVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGP 274
NV L+ +A G++ DL+ L A ++ +S ++ +S
Sbjct: 547 NV-LQDVAAKSQGFLLGDLQLLYDNAVRMKIRNRLGRTTLD--MSHFAKNLTDMQSSFAD 603
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR-GALLHGPP 333
S+ G ++PKV W DIGGL LK ++Q ++ P+KH +G + R G LL+GPP
Sbjct: 604 SL--GAP-KVPKVYWSDIGGLAKLKDEIQSSIGLPLKH---VHLMGKNLRRSGILLYGPP 657
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G EL +MYVG+SE +R F RAR AAP ++F DE D
Sbjct: 658 GTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELD 717
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ RG + + V +R++S LL EMDG+
Sbjct: 718 SLAPNRGVAGDSG-GVMDRVVSQLLAEMDGM 747
Score = 76 (31.8 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 38/150 (25%), Positives = 62/150 (41%)
Query: 57 LLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGK 116
LL G G+GK+ LV AV +E G H+ + +E L+ F A S +
Sbjct: 365 LLQGERGSGKSKLVSAVAQELGMHIYGADCAEIVSQVPSHTEMKLKAVF--AKSQVC--E 420
Query: 117 PSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDS--NKPSKTSVPHVVVVASTNRVDA 174
P ++ + D+ +D+R+ S + N+ K P VVV +++R
Sbjct: 421 PLMICFHNFEIF--GIDNEGNEDLRLLSAFHVQVQELFNRDRKH--PIVVVALTSDR--H 474
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILK 204
+ P ++ G F RFEIL+
Sbjct: 475 LKPMIQ--GLFLEIINIDMPSKEERFEILR 502
Score = 37 (18.1 bits), Expect = 1.8e-21, Sum P(3) = 1.8e-21
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 41 YSSQAQKLGLKWP 53
Y+S Q L KWP
Sbjct: 42 YNSAIQLLAPKWP 54
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 356 (130.4 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 120/422 (28%), Positives = 180/422 (42%)
Query: 29 EALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHS 88
E +++L F LL SS ++ W GL+L+G GTGKT L+ V R S
Sbjct: 222 EQVKKLNDF-LLVSSSDRESNTGW-HGLVLHGGSGTGKTMLLDHVSRTRWG--------S 271
Query: 89 VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVR-----IA 143
VH+ + K +++ F + A S +V ID++D L + R + +
Sbjct: 272 VHRVKASDKSKDIQDIFQTVTGQARS----IVLIDDLDELIDKERANRSTVINALVEGLV 327
Query: 144 SQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEIL 203
S + D KP K +V+ A + + + LRR R R ++
Sbjct: 328 SVRQAICDKEKPPKV----IVIAACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAVI 383
Query: 204 KLYTKKVPLDANVDLEA-IATSCNGYVGADLEALCREAT-MSAVKRSSDANECAGVLSVT 261
D + ++ + Y G DL+ L + A K E AG S
Sbjct: 384 SSLNPPFHPDVKEQIICDLSDRTHAYNGLDLQKLLSTIDYLVAAKLHHMQPEAAGTESDV 443
Query: 262 M-----------EDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPI 310
+ A + P+ + V ++ P V W+DI G +K+ L+ AV +
Sbjct: 444 RPKPPADTAFYTDSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVHFIT 503
Query: 311 KHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEA 370
+ + P +G LL+GPPGC GAEL +MYVGESE
Sbjct: 504 RPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGESER 563
Query: 371 LLRNTFQRARLAAPSIIFFDEAD-VVGAKRG-GSSSTSITV--GERLLSTLLTEMDGLEQ 426
+R+ F RAR AAPS+IFFDE D + G+++G GS T G +L+TLL EMDG E
Sbjct: 564 QIRDLFSRARAAAPSMIFFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDGFED 623
Query: 427 AK 428
+
Sbjct: 624 LR 625
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 80/262 (30%), Positives = 120/262 (45%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
I G + LR + F + QK P+G LLYGPPG KT +A+ E G +
Sbjct: 485 ISGQESVKRDLRLAVHFITRPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLN 544
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + +VGESE+ +R+ FS+A + A PS++F DEID++ R
Sbjct: 545 FFAVKGAELLNMYVGESERQIRDLFSRARAAA----PSMIFFDEIDSIAGSRKGFGSDGG 600
Query: 141 RIASQ----LFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
SQ + T + + + V V+A+TNR A+DPA+ R GRFD
Sbjct: 601 GATSQGGLNVLTTLLNEMDGFEDLRGVFVLAATNRPHALDPAIMRPGRFDEIIYVPPPDP 660
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
R IL+ + L +VD +A G GA++ C+ A A++RS D G
Sbjct: 661 AAREAILRKNSAGCQLAPDVDFARLAQLTEGNSGAEVAGTCQSAGKLAMRRSLDEPSSEG 720
Query: 257 VLSVTMEDWRHARSVVGPSITR 278
+S M D+ A + IT+
Sbjct: 721 AIS--MADFEAAIAGQRKQITK 740
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 360 (131.8 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 126/429 (29%), Positives = 203/429 (47%)
Query: 20 AIGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAV 73
++GG N V +L E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 555 SLGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLR-NGALLLTGGKGSGKSTLAKAI 612
Query: 74 VREC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+E AH+ + ++ + +K L AFS+A + +PSVV +D++D +
Sbjct: 613 CKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEA----VWMQPSVVLLDDLDLIA 668
Query: 130 --PR-RDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSGR 184
P +H D + +L L D K + V ++A++ ++ P L G
Sbjct: 669 GLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGV 728
Query: 185 --FDXXXXXXXXXXXXRFEIL-KLYTKKVPLDAN----VDLEAIATSCNGYVGADLEALC 237
F R EIL + K+ D N +DL+ +A G+V D L
Sbjct: 729 HIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLV 788
Query: 238 REATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLR 296
A S + R S + VL+ T++ + R + P+ R V + P+ + W+ IGGL
Sbjct: 789 DRAIHSRLSRQSISTREKLVLT-TLDFQKALRGFL-PASLRSVNLHKPRDLGWDKIGGLH 846
Query: 297 DLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXX 356
++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 847 EVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVK 906
Query: 357 GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLST 416
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+++
Sbjct: 907 GPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVVNQ 963
Query: 417 LLTEMDGLE 425
LLT++DG+E
Sbjct: 964 LLTQLDGVE 972
Score = 323 (118.8 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 82/242 (33%), Positives = 128/242 (52%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 827 RSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 886
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 887 KTLLAGVIARESRMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 941
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 942 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 997
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 998 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLE 1057
Query: 244 AV 245
A+
Sbjct: 1058 AL 1059
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 74/229 (32%), Positives = 127/229 (55%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG ++ ++E+I P+ + + LG+ P+G++LYGPPGTGKT L RAV
Sbjct: 148 DMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTD 207
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + ++GE + +RE F A HA PS++F+DEID++ R +
Sbjct: 208 CKFIRVSGAELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSTRVEGSGG 263
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ +TS ++ ++ +TNR+D +DPAL R GR D
Sbjct: 264 GDSEVQRTMLELLNQLDGFETS-KNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVA 322
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R EIL+++++K+ L ++L +A NG GAD++ +C EA M A++
Sbjct: 323 ARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALR 371
Score = 246 (91.7 bits), Expect = 9.9e-19, P = 9.9e-19
Identities = 52/157 (33%), Positives = 81/157 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P ++ + ++P T++ +GGL K++++ +E P+KH F LGI+ +G +L+GPP
Sbjct: 132 PLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPP 191
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G GAEL Y+GE ++R F AR APSIIF DE D
Sbjct: 192 GTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 251
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
+G+ R S + +R + LL ++DG E +K I
Sbjct: 252 SIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNI 288
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 82/229 (35%), Positives = 131/229 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG +E + E I +P+ + + +KLG+K P+G L+YGPPGTGKT L RA E A
Sbjct: 213 IGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNAT 272
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+ F+ A A PS++FIDE+DA+ +R D +
Sbjct: 273 FLKLAGPQLV-QMFIGDGAKLVRDCFALAKEKA----PSIIFIDELDAVGTKRFDSEKSG 327
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ S + V+A+TNRVD +DPAL RSGR D
Sbjct: 328 DREVQRTMLELLNQ-LDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEA 386
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL+++++K+ ++ +V+ +A S + + GA L+A+C EA M A+++
Sbjct: 387 RANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRK 435
Score = 235 (87.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 49/141 (34%), Positives = 73/141 (51%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL +++ +A+ WP+K + F +LGI +GAL++GPPG
Sbjct: 204 EKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLAR 263
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D VG KR S
Sbjct: 264 ACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDS 323
Query: 403 SSTSITVGERLLSTLLTEMDG 423
+ +R + LL ++DG
Sbjct: 324 EKSGDREVQRTMLELLNQLDG 344
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 84/250 (33%), Positives = 131/250 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + + +G+K P+G++LYGPPGTGKT L +AV E A
Sbjct: 195 IGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSAT 254
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R
Sbjct: 255 FLRVVGSELIQK-YLGDGPKLVREMFKVAEEHA----PSIVFIDEIDAVGTKRYEATSGG 309
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R + + + S V V+ +TNR+D++DPAL R GR D +
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 369
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
I +++T K+ + +VDLE S + GAD++A+C EA + A++ +
Sbjct: 370 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR--------MK 421
Query: 260 VTMEDWRHAR 269
+T D R AR
Sbjct: 422 ITQADLRKAR 431
Score = 230 (86.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 175 VDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 234
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+G+ L+R F+ A APSI+F DE
Sbjct: 235 PPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDE 294
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
D VG KR ++S +R + LL ++DG + KVI+
Sbjct: 295 IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 337
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 84/250 (33%), Positives = 131/250 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + + +G+K P+G++LYGPPGTGKT L +AV E A
Sbjct: 195 IGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSAT 254
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQD 139
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R
Sbjct: 255 FLRVVGSELIQK-YLGDGPKLVREMFKVAEEHA----PSIVFIDEIDAVGTKRYEATSGG 309
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R + + + S V V+ +TNR+D++DPAL R GR D +
Sbjct: 310 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTK 369
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
I +++T K+ + +VDLE S + GAD++A+C EA + A++ +
Sbjct: 370 RRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERR--------MK 421
Query: 260 VTMEDWRHAR 269
+T D R AR
Sbjct: 422 ITQADLRKAR 431
Score = 230 (86.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 175 VDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 234
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+G+ L+R F+ A APSI+F DE
Sbjct: 235 PPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDE 294
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
D VG KR ++S +R + LL ++DG + KVI+
Sbjct: 295 IDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 337
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 360 (131.8 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 122/427 (28%), Positives = 201/427 (47%)
Query: 20 AIGGNRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAVV 74
++GG A + E IT LL S Q L GL+ LL+ G G+GK++ +A+
Sbjct: 556 SLGGVSALGASAMEHITHSLLGRPLSRQLMALVAGLR-NGALLITGGKGSGKSTFAKAIC 614
Query: 75 RECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC----- 129
+E L KA G+ +++++A A S A +PSV+ +D++D +
Sbjct: 615 KEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGLPSV 674
Query: 130 PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSG--R 184
P ++H E Q R+A L D K ++ V ++A++ ++ P+L G
Sbjct: 675 PEQEHSPEAVQSQRLAH---ALNDMIKEFVSTGSLVALIATSQLQQSLHPSLVSAQGIHT 731
Query: 185 FDXXXXXXXXXXXXRFEILKLYTK-KVPLDAN----VDLEAIATSCNGYVGADLEALCRE 239
F R EIL K K+ D + +DL+ IA +V D L
Sbjct: 732 FQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFVARDFTVLVDR 791
Query: 240 ATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLRDL 298
A S++ R ++ L++T D++ A P+ R V + P+ + W+ IGGL ++
Sbjct: 792 AIHSSLSRQHSSSR--EDLTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEV 849
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGA 358
++ L ++ P K+ F+ L I G LL+GPPG G
Sbjct: 850 RQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGP 909
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+++ LL
Sbjct: 910 ELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVVNQLL 966
Query: 419 TEMDGLE 425
T++DG+E
Sbjct: 967 TQLDGVE 973
Score = 329 (120.9 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 83/243 (34%), Positives = 130/243 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 828 RNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTG 887
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L V RE G + +++ P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 888 KTLLAGVVARESGMNFISIKGPELLSK-YIGASEQAVRDVFIRAQA----AKPCILFFDE 942
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 943 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 998
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + +K + L +VDL+ +A+ + + GADL+AL A +
Sbjct: 999 RLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLE 1058
Query: 244 AVK 246
A++
Sbjct: 1059 ALQ 1061
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 359 (131.4 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 102/392 (26%), Positives = 186/392 (47%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHA--- 112
LLL GP G GK +L+ V ++ G H+ + + ++ + + +R QAS+
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 113 LSGKPSVVFIDEIDALCPRRDHRREQDVR--IASQLFTLMDSNKPSKTSVPHVVVVAST- 169
L K V ++ + ++E ++ + + L + DSN + S + +++ T
Sbjct: 730 LILKNFEVLEQTAQSM---QQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVTV 786
Query: 170 NRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDAN--VDLEAIATSCNG 227
N +D + +R F RF+ILK TK +P+D V ++ ++
Sbjct: 787 NSMDELSNKVRNW--FKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTAS 844
Query: 228 YVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV----- 282
++ ++L AL + ++++A+KR + +E + V+G I + ++
Sbjct: 845 FLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQ 904
Query: 283 -------EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGC 335
+IP V+W+D+GGL ++K ++ ++ P++H F+ GI G LL GPPG
Sbjct: 905 SSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGT 963
Query: 336 XXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVV 395
G EL +MY+GESE +R F +AR A P +IFFDE D +
Sbjct: 964 GKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSL 1023
Query: 396 GAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
RG + + V +R++S LL E+DG++++
Sbjct: 1024 APSRGNGADSG-GVMDRVVSQLLAELDGMQKS 1054
Score = 293 (108.2 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 88/298 (29%), Positives = 148/298 (49%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQ-AQKLGLKWPRGLLLYGPPGTGKTSLV 70
N W + +GG + + I PL + A +G + G+LL+GPPGTGKT L
Sbjct: 915 NVSW---DDVGGLANVKSEIMDTIQLPLEHPHLFASGIGKR--SGILLFGPPGTGKTLLA 969
Query: 71 RAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
+A+ EC + L+V P ++ ++GESEK +RE F++A KP V+F DE+D+L
Sbjct: 970 KAIATECSLNFLSVKGPELINM-YIGESEKNIREIFNKARQ----AKPCVIFFDELDSLA 1024
Query: 130 PRRDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
P R + + R+ SQL +D + S V ++ +TNR D +D +L R GR D
Sbjct: 1025 PSRGNGADSGGVMDRVVSQLLAELDGMQKSSD----VFIIGATNRPDLLDSSLMRPGRLD 1080
Query: 187 XXXXXXXXXXXX-RFEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSA 244
+F+IL+ T+K L +VDL + +C GAD AL +A +A
Sbjct: 1081 RLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNA 1140
Query: 245 VKRSSDANECAGVLSVTMEDWRHARSVVGPS-ITRGVTVEIPKVTWEDIGGLRDLKKK 301
A+ G ++ E+ ++ + +V + + V +P V+ +++ ++K+
Sbjct: 1141 FHERITAS-INGEIN---EEEQNQKLIVYQNHFIKAVNSLVPSVSLDELEYYHKVQKQ 1194
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 359 (131.4 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 129/432 (29%), Positives = 203/432 (46%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKLGLKWPRGLLLY-GPPGTGKTSLVRAVVR 75
+GG N V +L E IT LL S Q L G LL+ G G+GK++L +A+ +
Sbjct: 540 LGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLRNGALLFTGGKGSGKSTLAKAICK 598
Query: 76 ECG----AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL--- 128
E AH+ V+ ++ + +K + AFS+A+ +PSV+ +D++D +
Sbjct: 599 EASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWR----QPSVILLDDLDLIVGV 654
Query: 129 --CPRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSG 183
P +H E Q R+A L +M S S+ V V+A++ ++ P L G
Sbjct: 655 PAAPEHEHGPEAVQSQRLAHALSDMM-KEFISMGSL--VAVIATSQSQHSLHPWLVSAQG 711
Query: 184 R--FDXXXXXXXXXXXXRFEILKLYTK-KVPLD----ANVDLEAIATSCNGYVGADLEAL 236
F R EIL K K+ D N+DL+ IA G+V D L
Sbjct: 712 IHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVL 771
Query: 237 CREATMSAV--KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIG 293
A S + +R + E L +T D++ A P+ R V + P+ + W+ IG
Sbjct: 772 VDRAIHSHLSHQRITTREE----LVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIG 827
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 828 GLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFI 887
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 888 SVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 944
Query: 414 LSTLLTEMDGLE 425
++ LLT++DG+E
Sbjct: 945 VNQLLTQLDGVE 956
Score = 335 (123.0 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 85/242 (35%), Positives = 129/242 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 811 RNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTG 870
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE G + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 871 KTLLAGVIARESGMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 925
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 926 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 981
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ N + GADL+AL A +
Sbjct: 982 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLE 1041
Query: 244 AV 245
AV
Sbjct: 1042 AV 1043
>DICTYBASE|DDB_G0268066 [details] [associations]
symbol:DDB_G0268066 "putative ATPase" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0268066 GO:GO:0005524
EMBL:AAFI02000003 eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_647530.1
ProteinModelPortal:Q55FK3 EnsemblProtists:DDB0189755 GeneID:8616337
KEGG:ddi:DDB_G0268066 OMA:ANFIPIN Uniprot:Q55FK3
Length = 864
Score = 356 (130.4 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 86/272 (31%), Positives = 144/272 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG A + L+E++ + +S ++LG+K P+G+L+YGPPGTGKT L + V E A+
Sbjct: 599 IGGLEVAKDVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTMLAKCVAFEAKAN 658
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I+ + + +GESEK L E F A ++ PS++FIDEI ++ ++
Sbjct: 659 FIPINISELIQGEIGESEKTLSEIFRIA----INSSPSIIFIDEIQSIFGLKESSNNSSK 714
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRF 200
++ SQL +D+ + V+++A+TN AIDP+ RSGRFD R
Sbjct: 715 KLISQLLIELDNTIGNNDGGNRVMILAATNMPQAIDPSFLRSGRFDKTVYIGPPEVDERK 774
Query: 201 EILKLYTKK--VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
I + K + +D+ VDL +A + G+D+ AL +++ + A++R D N V
Sbjct: 775 SIFETLIKNSSIKVDSTVDLNQLAKYTINFTGSDINALLKKSGLYAIQR--DIN----VT 828
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEIPKVTWE 290
S+TM+D + PS++ ++ + WE
Sbjct: 829 SITMDDIMKVFWEMKPSVSPDQIFQLKQ--WE 858
Score = 210 (79.0 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 50/144 (34%), Positives = 73/144 (50%)
Query: 280 VTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
++ IPKV W DIGGL K L++ V W +HS + RLG+ +G L++GPPG
Sbjct: 587 ISPSIPKVLWSDIGGLEVAKDVLKEMVVWDYQHSDSIKRLGVKTPKGILMYGPPGTGKTM 646
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD-VVGAK 398
+EL +GESE L F+ A ++PSIIF DE + G K
Sbjct: 647 LAKCVAFEAKANFIPINISELIQGEIGESEKTLSEIFRIAINSSPSIIFIDEIQSIFGLK 706
Query: 399 RGGSSSTSITVGERLLSTLLTEMD 422
++S+ ++L+S LL E+D
Sbjct: 707 ESSNNSS-----KKLISQLLIELD 725
Score = 164 (62.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 54/227 (23%), Positives = 106/227 (46%)
Query: 40 LYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEK 99
L S + +LG+ P+ LLLYGP GK++L+ + ++ G + I+ + K + K
Sbjct: 322 LTSKRYSELGISKPKSLLLYGPQSCGKSTLINLISKQMGIKIFHINLSDLVKYQ--PNTK 379
Query: 100 ALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-------REQDVRIASQLFT--LM 150
L + QA + + S++ D ID + P+ D+ +Q++ LF L
Sbjct: 380 GLLLKYYQAKQNTTTN--SILLFDNIDEIFPQFDNTDSSNKNSNQQNINQLMNLFLNLLN 437
Query: 151 DSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEI----LKLY 206
+ N+ + ++ ++ TN++ ++ +R + F+ R +I LK +
Sbjct: 438 NDNENNDNENNNIFIIGITNKIKILNNFIRSN--FEEEIRIDPPNQEKRKQIFNWNLKGF 495
Query: 207 TKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
+ + + + +E I + NG +G D+ LCR A + ++KR NE
Sbjct: 496 GENIENNLKI-IEKINENSNGLMGGDITILCRNAKIKSLKRYKIENE 541
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 359 (131.4 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 130/432 (30%), Positives = 204/432 (47%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAVV 74
+GG N V ++ E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 559 LGGVNSIGVSSM-EHITHSLLGRPLSRQLMSLMAGLR-NGALLLTGGKGSGKSTLAKAIC 616
Query: 75 REC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC- 129
+E AH+ ++ ++ + +K + AFS+AS +PSVV +D++D +
Sbjct: 617 KEAFDVLDAHVEIVDCKALRGKRLENLQKTIVAAFSEASWR----QPSVVLLDDLDLVAG 672
Query: 130 ----PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRS 182
P +H E Q R+A L D K + V ++A++ ++ P L
Sbjct: 673 LPALPEHEHSPEAVQSQRLAH---ALNDMTKELISMGSLVALIATSQSQHSLHPLLVSAQ 729
Query: 183 G--RFDXXXXXXXXXXXXRFEILKLYTK-KVPLDAN----VDLEAIATSCNGYVGADLEA 235
G F R EIL K K+ D N +DL+ IA G+V D
Sbjct: 730 GIHLFQCVQHIQPPDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFVARDFIV 789
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGG 294
L A S + S + VL+ T+ D++ A P+ R V + P+ + W+ IGG
Sbjct: 790 LVDRAIHSRLSNQSVSTREELVLT-TL-DFQKALQGFVPASLRNVNLHKPRDLGWDHIGG 847
Query: 295 LRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXX 354
LR++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 848 LREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLV 907
Query: 355 XX-GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 908 LRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 964
Query: 414 LSTLLTEMDGLE 425
++ LLT++DG+E
Sbjct: 965 VNQLLTQLDGVE 976
Score = 334 (122.6 bits), Expect = 7.5e-29, P = 7.5e-29
Identities = 86/243 (35%), Positives = 129/243 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG R + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 830 RNVNLHKPRDLGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 889
Query: 66 KTSLVRAVVRECGAHLTVI--SPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFID 123
KT L V RE G L V+ P + K ++G SE+A+R+ F +A + KP ++F D
Sbjct: 890 KTLLAGVVARESGMILLVLRYGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFD 944
Query: 124 EIDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
E +++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R
Sbjct: 945 EFESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRP 1000
Query: 183 GRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATM 242
GR D R EIL + + +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 1001 GRLDKCVYCPPPDQVSRLEILNVLSASLPLAEDVDLQHVASLTDSFTGADLKALLYNAQL 1060
Query: 243 SAV 245
A+
Sbjct: 1061 EAL 1063
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 359 (131.4 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 129/432 (29%), Positives = 203/432 (46%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKLGLKWPRGLLLY-GPPGTGKTSLVRAVVR 75
+GG N V +L E IT LL S Q L G LL+ G G+GK++L +A+ +
Sbjct: 689 LGGVNSLGVSSL-EHITHSLLGRPLSRQLMSLVAGLRNGALLFTGGKGSGKSTLAKAICK 747
Query: 76 ECG----AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL--- 128
E AH+ V+ ++ + +K + AFS+A+ +PSV+ +D++D +
Sbjct: 748 EASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWR----QPSVILLDDLDLIVGV 803
Query: 129 --CPRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRSG 183
P +H E Q R+A L +M S S+ V V+A++ ++ P L G
Sbjct: 804 PAAPEHEHGPEAVQSQRLAHALSDMM-KEFISMGSL--VAVIATSQSQHSLHPWLVSAQG 860
Query: 184 R--FDXXXXXXXXXXXXRFEILKLYTK-KVPLD----ANVDLEAIATSCNGYVGADLEAL 236
F R EIL K K+ D N+DL+ IA G+V D L
Sbjct: 861 IHIFQCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVL 920
Query: 237 CREATMSAV--KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIG 293
A S + +R + E L +T D++ A P+ R V + P+ + W+ IG
Sbjct: 921 VDRAIHSHLSHQRITTREE----LVLTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIG 976
Query: 294 GLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXX 353
GL ++++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 977 GLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFI 1036
Query: 354 XXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERL 413
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R+
Sbjct: 1037 SVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRV 1093
Query: 414 LSTLLTEMDGLE 425
++ LLT++DG+E
Sbjct: 1094 VNQLLTQLDGVE 1105
Score = 335 (123.0 bits), Expect = 6.7e-29, P = 6.7e-29
Identities = 85/242 (35%), Positives = 129/242 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 960 RNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTG 1019
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE G + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 1020 KTLLAGVIARESGMNFISVKGPELLSK-YIGASEQAVRDIFIRAQA----AKPCILFFDE 1074
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 1075 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 1130
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + + +PL +VDL+ +A+ N + GADL+AL A +
Sbjct: 1131 RLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLE 1190
Query: 244 AV 245
AV
Sbjct: 1191 AV 1192
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 76/230 (33%), Positives = 126/230 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 145 DMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 204
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + ++GE + +RE F A HA PS++F+DEID++ R
Sbjct: 205 CTFIRVSGSELVQKYIGEGSRMVRELFIMAREHA----PSIIFMDEIDSIGSSRGESGSG 260
Query: 139 --DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
D + + L++ + S ++ V+ TNR+D +DPAL R GR D
Sbjct: 261 GGDSEVQRTMLELLNQLDGFE-STKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGD 319
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L+ I+ NG GA+L+A+C EA M A++
Sbjct: 320 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALR 369
Score = 251 (93.4 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 57/161 (35%), Positives = 82/161 (50%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ P ++ +IP T++ +GGL K++++ +E PIKH F LGI+ +G LL+G
Sbjct: 127 IDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 186
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+GE ++R F AR APSIIF DE
Sbjct: 187 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDE 246
Query: 392 ADVVGAKRG--GSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
D +G+ RG GS V +R + LL ++DG E K I
Sbjct: 247 IDSIGSSRGESGSGGGDSEV-QRTMLELLNQLDGFESTKNI 286
>TAIR|locus:2083681 [details] [associations]
symbol:AT3G15120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0009506 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
IPI:IPI00537350 RefSeq:NP_188130.1 UniGene:At.39103 PRIDE:F4IXH3
EnsemblPlants:AT3G15120.1 GeneID:820743 KEGG:ath:AT3G15120
OMA:LLGPIND Uniprot:F4IXH3
Length = 1954
Score = 360 (131.8 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 93/252 (36%), Positives = 137/252 (54%)
Query: 9 SEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
SE + ++ +++ G + ++E++ PLLY LGL PRG+LL+G PGTGKT
Sbjct: 709 SESGKAFEGWDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTL 768
Query: 69 LVRAVVRECGAHLTVISPHSVHKA-----HVGESEKALREAFSQASSHALSGKPSVVFID 123
+VRA++ I+ + A +VG++E+ LR F A +PS++F D
Sbjct: 769 VVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKC----QPSIIFFD 824
Query: 124 EIDALCPRRDHRREQD-VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRS 182
EID L P+R +++Q + S L L+D K S+ SV VV+ +TN DAIDPALRR
Sbjct: 825 EIDGLAPKRSRQQDQTHSSVVSTLLALLDGLK-SRGSV---VVIGATNYPDAIDPALRRP 880
Query: 183 GRFDXXXXXXXXXXXXRFEILKLYTKKVPLDAN-VDLEAIATSCNGYVGADLEALCREAT 241
GRFD R I+ L+T+K P + L+ IA G+ GAD++ALC +A
Sbjct: 881 GRFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYLLKWIAKETAGFAGADIQALCTQAA 940
Query: 242 MSAVKRSSDANE 253
M A+ RS E
Sbjct: 941 MIALNRSFPLQE 952
Score = 184 (69.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 52/168 (30%), Positives = 76/168 (45%)
Query: 272 VGPSITRGVTVEIPKVT--WEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
V P G E K W+ + GL + + +++ V P+ + F LG++P RG LL
Sbjct: 699 VAPEYIGGSDSESGKAFEGWDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILL 758
Query: 330 HGPPGCXXXXXXXXXXXXXXX-----XXXXXXGAELYSMYVGESEALLRNTFQRARLAAP 384
HG PG GA+ YVG++E LR FQ A P
Sbjct: 759 HGHPGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQP 818
Query: 385 SIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SIIFFDE D + KR + + ++STLL +DGL+ + V++
Sbjct: 819 SIIFFDEIDGLAPKRSRQQDQTHS---SVVSTLLALLDGLKSRGSVVV 863
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 335 (123.0 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 91/240 (37%), Positives = 128/240 (53%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
+IGG + L+E++ PLLY L + PRG+L +GPPGTGKT + R + C
Sbjct: 373 SIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCST 432
Query: 80 HLTVISPHSVHKAH------VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
IS + K VGE+E+ LR F +A +PS++F DEID L P R
Sbjct: 433 KNQKIS-FFLRKGSDCLSKWVGEAERQLRLLFEEARRV----QPSIIFFDEIDGLAPIRS 487
Query: 134 HRREQD-VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXX 192
++EQ I S L LMD + VVV+ +TNR + +DPALRR GRFD
Sbjct: 488 SKQEQTHSSIVSTLLALMDG----LDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFP 543
Query: 193 XXXXXXRFEILKL----YTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R +IL++ ++ K+P + L A S +GY GADL+ALC EA ++AV+R+
Sbjct: 544 LPNKQARMKILEINSLHFSPKIPESYLLHL---AESTSGYGGADLKALCTEAALNAVRRT 600
Score = 195 (73.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/149 (34%), Positives = 73/149 (48%)
Query: 289 WEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXX 348
+ IGGL D+ +L++ V P+ + F L I+P RG L HGPPG
Sbjct: 371 FNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANC 430
Query: 349 XXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G++ S +VGE+E LR F+ AR PSIIFFDE D + R S
Sbjct: 431 STKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIR---S 487
Query: 404 STSITVGERLLSTLLTEMDGLE-QAKVII 431
S ++STLL MDGL+ + +V++
Sbjct: 488 SKQEQTHSSIVSTLLALMDGLDTRGQVVV 516
Score = 50 (22.7 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 370 ALLRNTFQRARLAAPSIIFFDEAD 393
+LL F AR APSIIF + +
Sbjct: 753 SLLTKIFSEARKNAPSIIFINNVE 776
>DICTYBASE|DDB_G0282215 [details] [associations]
symbol:DDB_G0282215 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282215 GO:GO:0005524 GO:GO:0017111
EMBL:AAFI02000046 RefSeq:XP_640290.2 ProteinModelPortal:Q54SU5
EnsemblProtists:DDB0267128 GeneID:8623467 KEGG:ddi:DDB_G0282215
OMA:PNINFIS Uniprot:Q54SU5
Length = 534
Score = 346 (126.9 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 103/350 (29%), Positives = 167/350 (47%)
Query: 95 GESEKALREAFSQASSHALSGKPSVVFIDEIDALCP-RRDHRREQDVRIASQLFTLMDSN 153
G++EK + F+ ASS + P V+ +EID++ R D + R+ S TL+++N
Sbjct: 73 GDTEKLIESIFNTASSQS----PFVLVFEEIDSISQIRNDSLGYIEQRVVSNFLTLLENN 128
Query: 154 KPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLD 213
++ V V+ T+R+++ID A G+FD R EIL L KK P
Sbjct: 129 SKKRS----VFVIGVTSRIESIDTAFFSIGKFDSVLNLPIPSPNDRKEILYLLFKKFPNF 184
Query: 214 ANVDL------EAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRH 267
N ++ E + +GYVG+DL +LC+EA + +KR N+C + D+
Sbjct: 185 KNNEIHYKELSEYLGECTHGYVGSDLNSLCKEAILVNIKR----NDCHDYNLIEKFDFNK 240
Query: 268 ARSVVGPSITRGVTVEIPKVTWED------------IGGLRDLKKKLQQAVEWPIKHSTA 315
A +V PSI ++P + + D IGGL ++ +K++ ++ P+ + +
Sbjct: 241 AFELVKPSILN--QYKLPTIGYGDGGGNGNGNGFNEIGGLDEIIEKIKSSILTPMLNKSV 298
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXX-XXXXXXXXGAELYSMYVGESEALLRN 374
RLGI G LL+GPPG ++ VG SE L
Sbjct: 299 LDRLGIKSPSGVLLYGPPGNGKSLIARAIASSSPNINFISISSTDIIDPVVGASEKNLSK 358
Query: 375 TFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F+ R ++P I+F D+ +V+ RG S+ + +RLLS LLTE+DG+
Sbjct: 359 LFKTLRESSPCILFLDQVEVLAKLRGFDDSSEQS-SDRLLSCLLTEIDGI 407
Score = 308 (113.5 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 78/244 (31%), Positives = 121/244 (49%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG +E ++ I P+L S +LG+K P G+LLYGPPG GK+ + RA+
Sbjct: 275 IGGLDEIIEKIKSSILTPMLNKSVLDRLGIKSPSGVLLYGPPGNGKSLIARAIASSSPNI 334
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR--DHRRE 137
+ IS + VG SEK L + F + P ++F+D+++ L R D E
Sbjct: 335 NFISISSTDIIDPVVGASEKNLSKLFKTLRESS----PCILFLDQVEVLAKLRGFDDSSE 390
Query: 138 QDV-RIASQLFTLMDS--------NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
Q R+ S L T +D N + + +V+A+T R+D +DP++ R GRFD
Sbjct: 391 QSSDRLLSCLLTEIDGIYGGGGSGNNNNNNNSNQSIVLAATTRIDLLDPSILRPGRFDYH 450
Query: 189 XXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R +I K TK +PLD +VD ++ G+ GAD+ LC+E + A++
Sbjct: 451 IEIPNPNKEARLDIFKKITKSMPLDESVDFIQLSELTQGFNGADINNLCKETALLALRND 510
Query: 249 SDAN 252
+ N
Sbjct: 511 ININ 514
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 81/252 (32%), Positives = 140/252 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + +GG +E L E I P+ + + + +G++ P+G L+YGP
Sbjct: 164 DSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGP 223
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + +P V + ++GE K +R+AF+ A A P+++
Sbjct: 224 PGTGKTLLARACAAQTNATFLKLAAPQLV-QMYIGEGAKLVRDAFALAKEKA----PTII 278
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ +S V V+A+TNRVD +DPAL
Sbjct: 279 FIDELDAIGTKRFDSEKSGDREVQRTMLELLNQ-LDGFSSDDRVKVLAATNRVDVLDPAL 337
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R +IL+++++K+ D +++ + +A S + + GA L+A+ E
Sbjct: 338 LRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVE 397
Query: 240 ATMSAVKRSSDA 251
A M A++ +
Sbjct: 398 AGMIALRNGQSS 409
Score = 222 (83.2 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 49/151 (32%), Positives = 76/151 (50%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P T+ D+GGL ++L +A+ P+K + F +GI +GAL++GPPG
Sbjct: 174 EKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLAR 233
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
+L MY+GE L+R+ F A+ AP+IIF DE D +G KR S
Sbjct: 234 ACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDS 293
Query: 403 SSTSITVGERLLSTLLTEMDGL---EQAKVI 430
+ +R + LL ++DG ++ KV+
Sbjct: 294 EKSGDREVQRTMLELLNQLDGFSSDDRVKVL 324
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 357 (130.7 bits), Expect = 3.7e-31, P = 3.7e-31
Identities = 92/235 (39%), Positives = 126/235 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC--- 77
+GG + ++ L+E+++ PLLY Q+ + PRG+L +GPPGTGKT L RA+
Sbjct: 571 VGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALANSVSSE 630
Query: 78 GAHLTVISPHSVHKAH--VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
G +T VGE+E+ LR F +A +PS++F DEID L P R +
Sbjct: 631 GRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKT----QPSIIFFDEIDGLAPVRSSK 686
Query: 136 REQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+EQ I S L LMD V+V+ +TNR D+IDPALRR GRFD
Sbjct: 687 QEQIHASIVSTLLALMDG----MDGRGQVIVIGATNRPDSIDPALRRPGRFDREFYFPLP 742
Query: 195 XXXXRFEILKLYTK--KVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R IL ++TK PL ++ E +A GY GADL ALC EA ++AV+R
Sbjct: 743 NTEGRRAILDIHTKGWDPPLPNSIKDE-LAEITKGYGGADLRALCTEAALNAVQR 796
Score = 199 (75.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 52/151 (34%), Positives = 75/151 (49%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V ++++GGL+ +L++ V P+ + F R I P RG L HGPPG
Sbjct: 566 VNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALAN 625
Query: 347 XXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
GA+ S +VGE+E LR F+ AR PSIIFFDE D + R
Sbjct: 626 SVSSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPSIIFFDEIDGLAPVR-- 683
Query: 402 SSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SS + ++STLL MDG++ + +VI+
Sbjct: 684 -SSKQEQIHASIVSTLLALMDGMDGRGQVIV 713
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 354 (129.7 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 90/236 (38%), Positives = 127/236 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG A + L ++I P Y L L+ G+LLYG PGTGKT L AV +E G
Sbjct: 796 ERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESG 855
Query: 79 AH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE 137
+ +++ P + K ++G SE+A+R+ F +A KP ++F DE D+L PRR H
Sbjct: 856 MNFISIKGPELLSK-YIGASEQAVRDVFQRAQQ----AKPCILFFDEFDSLAPRRGHDNT 910
Query: 138 QDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
R+ +QL T +D + + V V+A+++R D IDPAL R GR D
Sbjct: 911 GVTDRVVNQLLTQLDGVE----GLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDR 966
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDAN 252
R EIL+ T VPL A+VDL+ IA + + GADL+AL A + A+ S N
Sbjct: 967 AARLEILRALTHSVPLAADVDLDQIAGATELFTGADLKALLYNAQLEAIHSSLGPN 1022
Score = 342 (125.4 bits), Expect = 9.8e-30, P = 9.8e-30
Identities = 121/425 (28%), Positives = 190/425 (44%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGL-----LLYGPPGTGKTSLVRAVV 74
++GG + + I+ LL S +++L + RGL L+ G G+GK+SL RA+
Sbjct: 519 SLGGVEDISRSAFQHISHALLGGSLSREL-ISTGRGLRGGALLITGAKGSGKSSLSRALC 577
Query: 75 RECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID-----ALC 129
R+ L K G+ +R+ A+ +PSVV +D++D A
Sbjct: 578 RKASEDLDAHIQLLDCKTLKGKRTDTIRQRLEDVFEQAVWRQPSVVLLDDLDHVAGAATS 637
Query: 130 PRRDHRREQDVR--IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL---RRSGR 184
P +H E +R I+ L L+D ++S+ ++V A T A+ P L + S
Sbjct: 638 PEHEHGPEAVLRQHISQSLKDLVDEIV-LRSSLIALIVTAQTEH--ALHPTLTVVQGSHF 694
Query: 185 FDXXXXXXXXXXXXRFEILK-LYTKKV--PLDANVDLEAIATSCNGYVGADLEALCREAT 241
F R EILK L KK +DL+++A G++ DL L A
Sbjct: 695 FQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQTTLDLDSVAKETEGFMARDLNLLLERAI 754
Query: 242 MSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGGLRDLKK 300
+ +S+ C +D+R A P ++ P E IGGL + ++
Sbjct: 755 HANTLHNSEDLSC--------KDFRQALQGFTPPSLWDAQLQAPSGAGMERIGGLHEARQ 806
Query: 301 KLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAEL 360
L + P K+ FS L + G LL+G PG G EL
Sbjct: 807 LLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPEL 866
Query: 361 YSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTE 420
S Y+G SE +R+ FQRA+ A P I+FFDE D + +RG +T +T +R+++ LLT+
Sbjct: 867 LSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRG-HDNTGVT--DRVVNQLLTQ 923
Query: 421 MDGLE 425
+DG+E
Sbjct: 924 LDGVE 928
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 354 (129.7 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 131/431 (30%), Positives = 202/431 (46%)
Query: 21 IGG-NRAAVEALRELITFPLL---YSSQAQKL--GLKWPRGLLLYGPPGTGKTSLVRAVV 74
+GG N V ++ E IT LL S Q L GL+ LLL G G+GK++L +A+
Sbjct: 555 LGGVNSLGVSSM-EHITHSLLGRPLSRQLVSLVAGLR-NGALLLTGGKGSGKSTLAKAIC 612
Query: 75 REC----GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC- 129
+E AH+ +I ++ + +K L AFS+A L +PSVV +D++D +
Sbjct: 613 KEAFDILDAHVEIIDCKALRGKRLENIQKTLAAAFSEA----LWRQPSVVLLDDLDLVVG 668
Query: 130 ----PRRDHRRE--QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL-RRS 182
P +H E Q R+A L L+ S S+ V ++A++ ++ P L
Sbjct: 669 RSALPEHEHSPEAIQSQRLAHALNDLV-KEFISMGSL--VALIATSQSQHSLHPLLVSAQ 725
Query: 183 GR--FDXXXXXXXXXXXXRFEILKLYTK-KVPLD----ANVDLEAIATSCNGYVGADLEA 235
G F R EIL K K+ D +DL+ IA G+V D
Sbjct: 726 GIHIFQCVQHIQPPDQDQRCEILHAIIKNKLDCDMKRFTGLDLQRIAKETEGFVARDFTM 785
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPK-VTWEDIGG 294
L A S + + VL+ T+ D++ A P R V + P+ + W+ IGG
Sbjct: 786 LVDRAIHSHLSHQNVYTREELVLT-TL-DFQKALRGFTPVSLRNVNLHKPRDLGWDRIGG 843
Query: 295 LRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXX 354
L D+++ L ++ P K+ F+ L I G LL+GPPG
Sbjct: 844 LHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFIS 903
Query: 355 XXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLL 414
G EL S Y+G SE +R+ F RA+ A P I+FFDE + + +RG +T +T +R++
Sbjct: 904 VKGPELLSKYIGASEQAVRDVFVRAQAAKPCILFFDEFESIAPRRG-HDNTGVT--DRVV 960
Query: 415 STLLTEMDGLE 425
+ LLT++DG+E
Sbjct: 961 NQLLTQLDGVE 971
Score = 328 (120.5 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 83/242 (34%), Positives = 130/242 (53%)
Query: 6 RIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTG 65
R ++ H + + IGG + L + I P Y L ++ G+LLYGPPGTG
Sbjct: 826 RNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTG 885
Query: 66 KTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDE 124
KT L + RE G + ++V P + K ++G SE+A+R+ F +A + KP ++F DE
Sbjct: 886 KTLLAGVIARESGMNFISVKGPELLSK-YIGASEQAVRDVFVRAQA----AKPCILFFDE 940
Query: 125 IDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
+++ PRR H R+ +QL T +D + + V V+A+T+R D IDPAL R G
Sbjct: 941 FESIAPRRGHDNTGVTDRVVNQLLTQLDGVE----GLQGVYVLAATSRPDLIDPALLRPG 996
Query: 184 RFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D R EIL + ++ +PL +VDL+ +A+ + + GADL+AL A +
Sbjct: 997 RLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFTGADLKALLYGAQLE 1056
Query: 244 AV 245
A+
Sbjct: 1057 AL 1058
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 73/229 (31%), Positives = 125/229 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG ++ ++E+I P+ + + LG+ P+G++LYGPPGTGKT L RAV
Sbjct: 144 DMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTE 203
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + ++GE + +RE F A HA PS++F+DEID++ R +
Sbjct: 204 CKFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRVEGSSG 259
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ ++S + ++ +TNR+D +DPAL R GR D
Sbjct: 260 GDSEVQRTMLELLNQLDGFESS-KDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVA 318
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++ + L ++L IA NG GAD++ +C EA M A++
Sbjct: 319 ARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALR 367
Score = 251 (93.4 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 53/159 (33%), Positives = 83/159 (52%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T++ +GGL K++++ +E P+KH F LGI+ +G +L+G
Sbjct: 126 VDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYG 185
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL Y+GE ++R F AR APSIIF DE
Sbjct: 186 PPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 245
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
D +G+ R SS + +R + LL ++DG E +K I
Sbjct: 246 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDI 284
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 115 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 174
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 175 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 229
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 230 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 288
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 289 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 348
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 349 AGMIALRRGA 358
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 125 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 184
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 185 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 244
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 245 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 275
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 119 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 178
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 179 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 233
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 234 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 292
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 293 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 352
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 353 AGMIALRRGA 362
Score = 235 (87.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 129 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 188
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 189 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 248
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 249 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 279
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 169 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 228
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 229 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 283
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 284 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 342
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 402
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 403 AGMIALRRGA 412
Score = 235 (87.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 179 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 238
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 127 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 186
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 187 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 241
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 242 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 300
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 301 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 360
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 361 AGMIALRRGA 370
Score = 235 (87.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 137 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 196
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 197 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 256
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 257 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 287
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 169 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 228
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 229 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 283
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 284 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 342
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 402
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 403 AGMIALRRGA 412
Score = 235 (87.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 179 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 238
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 176 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 235
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 236 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 290
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 291 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 349
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 350 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 409
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 410 AGMIALRRGA 419
Score = 235 (87.8 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 186 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 245
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 246 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 305
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 306 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 336
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 172 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 231
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 232 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 286
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 287 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 345
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 346 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 405
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 406 AGMIALRRGA 415
Score = 235 (87.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 182 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 241
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 242 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 301
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 169 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 228
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 229 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 283
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 284 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 342
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 343 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 402
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 403 AGMIALRRGA 412
Score = 235 (87.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 179 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 238
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 329
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 172 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 231
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 232 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 286
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 287 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 345
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 346 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 405
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 406 AGMIALRRGA 415
Score = 235 (87.8 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 182 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 241
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 242 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 301
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 85/265 (32%), Positives = 145/265 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 157 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 216
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 217 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 271
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + ++ V V+A+TNRVD +DPAL
Sbjct: 272 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNM-QVKVIAATNRVDILDPAL 330
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 331 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVE 390
Query: 240 ATMSAVKR-SSDANE---CAGVLSV 260
A M A++R +++ N G+L V
Sbjct: 391 AGMIALRRGATELNHEDYMEGILEV 415
Score = 235 (87.8 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 167 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 226
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 227 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 286
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 287 EKAGDREVQRTMLELLNQLDGFQPNMQVKVI 317
>UNIPROTKB|G4N7L8 [details] [associations]
symbol:MGG_06380 "ATPase family AAA domain-containing
protein 2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001234
RefSeq:XP_003717194.1 EnsemblFungi:MGG_06380T0 GeneID:2684535
KEGG:mgr:MGG_06380 Uniprot:G4N7L8
Length = 1706
Score = 353 (129.3 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 90/234 (38%), Positives = 128/234 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + ++ L+E+I PLLY Q+ + PRG+L +GPPGTGKT L RA+ G
Sbjct: 622 VGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSNAVGIG 681
Query: 81 LTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
I+ + A VGE+EK LR F +A +PS++F DEID L P R +
Sbjct: 682 GRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRT----QPSIIFFDEIDGLAPVRSSK 737
Query: 136 REQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+EQ I S L LMD V+V+ +TNR D++DPALRR GRFD
Sbjct: 738 QEQIHASIVSTLLALMDG----MDGRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLP 793
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R I+ ++TK L A+ +++A GY GADL ALC EA +++++R+
Sbjct: 794 DVEGRRSIIDIHTKDWGL-ADDFKDSLARQTKGYGGADLRALCTEAALNSIQRT 846
Score = 190 (71.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/151 (33%), Positives = 74/151 (49%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V + +GGL+ +L++ + P+ + F R ++P RG L HGPPG
Sbjct: 617 VDFSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSN 676
Query: 347 XXXXXXXXXX-----GAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
GA+ S +VGE+E LR F+ AR PSIIFFDE D + R
Sbjct: 677 AVGIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLAPVR-- 734
Query: 402 SSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
SS + ++STLL MDG++ + +VI+
Sbjct: 735 -SSKQEQIHASIVSTLLALMDGMDGRGQVIV 764
Score = 40 (19.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 55 GLLLYGPPGTGKTSLVRA 72
G LL GP GTG T V +
Sbjct: 529 GSLLGGPWGTGATGGVES 546
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 77/232 (33%), Positives = 126/232 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG ++ ++E+I L + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 132 DMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 191
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + ++GE + +RE F A HA PS++F+DEID++ R D
Sbjct: 192 CRFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRIDSAGS 247
Query: 138 QDVRIASQLFTLM---DSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
D + + L+ D +P+K ++ ++ +TNR+D +DPAL R GR D
Sbjct: 248 GDSEVQRTMLELLNQLDGFEPTK----NIKIIMATNRLDILDPALLRPGRIDRKIEFPPP 303
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +IL+++++ + L ++L IA NG GA+L+ +C EA M A++
Sbjct: 304 SVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALR 355
Score = 245 (91.3 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 54/161 (33%), Positives = 83/161 (51%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ + ++P T++ IGGL K++++ +E +KH F LGI+ +G LL
Sbjct: 112 SSVDPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLL 171
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL Y+GE ++R F AR APSIIF
Sbjct: 172 YGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 231
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
DE D +G+ R S+ + + +R + LL ++DG E K I
Sbjct: 232 DEIDSIGSSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNI 272
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 340 (124.7 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 87/232 (37%), Positives = 128/232 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
I G A L E + PL + + W +G+L+ GPPGTGKT L +AV ECG
Sbjct: 236 IAGLTEAKRLLEEAVVLPLWMPDYFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTT 294
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+S S+ + GESEK +R F A +A PS +FIDEID++C +R E +
Sbjct: 295 FFNVSSASLTSKYHGESEKLVRLLFEMARFYA----PSTIFIDEIDSICSKRGTGSEHEA 350
Query: 141 --RIASQLFTLMDS-NKPS--KTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
R+ S+L MD + PS + S V+V+A+TN ID ALRR R +
Sbjct: 351 SRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPE 408
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R ++L++ K+VPL ++DL++IA +GY GAD+ +CR+A+M A++R
Sbjct: 409 IDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRR 460
Score = 211 (79.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 55/151 (36%), Positives = 73/151 (48%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVRGALLHGPP 333
++ R + P V W DI GL + K+ L++AV P+ F GI P +G L+ GPP
Sbjct: 219 NLERDIVQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRPWKGVLMVGPP 276
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G A L S Y GESE L+R F+ AR APS IF DE D
Sbjct: 277 GTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEID 336
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ +KRG S + R+ S LL +MDG+
Sbjct: 337 SICSKRGTGSEHEAS--RRVKSELLIQMDGV 365
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 344 (126.2 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 99/278 (35%), Positives = 143/278 (51%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK ++++E + + ++ G + A E L E++ F L + +LG K P+G LL GP
Sbjct: 140 KSKAKMLTEKHGRVTFDDVAGIDEAK-EELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E G IS + VG +R+ F QA +A P +VF
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNA----PCIVF 253
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R + REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 254 IDEIDAVGRHRGAGYGGGNDEREQTL---NQLLVEMDGFEANEG----VIILAATNRKDV 306
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +IL ++ +K PL +VDL IA G+ GADL
Sbjct: 307 LDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLA 366
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + G VTMED+ +A+ V
Sbjct: 367 NLVNEAALMAAR--------VGRRFVTMEDFENAKDKV 396
Score = 226 (84.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + +T + +VT++D+ G+ + K++L++ VE+ +++ FSRLG +GALL GP
Sbjct: 139 GKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
D VG RG E+ L+ LL EMDG E + +I
Sbjct: 258 DAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVI 296
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 344 (126.2 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 99/278 (35%), Positives = 143/278 (51%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK ++++E + + ++ G + A E L E++ F L + +LG K P+G LL GP
Sbjct: 140 KSKAKMLTEKHGRVTFDDVAGIDEAK-EELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E G IS + VG +R+ F QA +A P +VF
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNA----PCIVF 253
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R + REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 254 IDEIDAVGRHRGAGYGGGNDEREQTL---NQLLVEMDGFEANEG----VIILAATNRKDV 306
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +IL ++ +K PL +VDL IA G+ GADL
Sbjct: 307 LDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLA 366
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + G VTMED+ +A+ V
Sbjct: 367 NLVNEAALMAAR--------VGRRFVTMEDFENAKDKV 396
Score = 226 (84.6 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + +T + +VT++D+ G+ + K++L++ VE+ +++ FSRLG +GALL GP
Sbjct: 139 GKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGP 197
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 198 PGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
D VG RG E+ L+ LL EMDG E + +I
Sbjct: 258 DAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVI 296
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 81/250 (32%), Positives = 137/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 134 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 193
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AFS A A PS++
Sbjct: 194 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFSLAKEKA----PSII 248
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 249 FIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTT-QVKVIAATNRVDILDPAL 307
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 308 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE 367
Query: 240 ATMSAVKRSS 249
A + A++R +
Sbjct: 368 AGIIALRRGA 377
Score = 234 (87.4 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 144 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 203
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D +G KR S
Sbjct: 204 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDS 263
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 264 EKAGDREVQRTMLELLNQLDGFQPTTQVKVI 294
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 81/250 (32%), Positives = 136/250 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E I P+ + + + LG++ P+G+L+YGP
Sbjct: 164 DSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGP 223
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + A L + P V + +G+ K +R+AF+ A A PS++
Sbjct: 224 PGTGKTLLARACAAQTKATFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PSII 278
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA +R D + D + + L++ + + V V+A+TNRVD +DPAL
Sbjct: 279 FIDELDATGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPAL 337
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCRE 239
RSGR D R I++++++K+ + +V+ E +A + + GA +A+C E
Sbjct: 338 LRSGRLDQKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVE 397
Query: 240 ATMSAVKRSS 249
A M A++R +
Sbjct: 398 AGMIALRRGT 407
Score = 232 (86.7 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 52/151 (34%), Positives = 73/151 (48%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +A+ P+ H F LGI P +G L++GPPG
Sbjct: 174 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 233
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ APSIIF DE D G KR S
Sbjct: 234 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDS 293
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVI 430
+R + LL ++DG + Q KVI
Sbjct: 294 EKAGDREVQRTMLELLNQLDGFQPNTQVKVI 324
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/257 (31%), Positives = 142/257 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E + P+ + + LG+ P+G+L+YGP
Sbjct: 160 DSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGP 219
Query: 62 PGTGKTSLVRAVVREC-GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RAV + L + P V + +G+ K +R+AF+ A A P+++
Sbjct: 220 PGTGKTMMARAVAAQTKSTFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PAII 274
Query: 121 FIDEIDALCPRR-DHRR--EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAID 176
FIDE+DA+ +R D + +++V R +L +D +P+ + V+A+TNR+D +D
Sbjct: 275 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDD----IKVIAATNRIDVLD 330
Query: 177 PALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEAL 236
PAL RSGR D R I++++++K+ ++ +V+ E +A + + GA +A+
Sbjct: 331 PALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 237 CREATMSAVKRSSDANE 253
C EA M A++R DA E
Sbjct: 391 CVEAGMIALRR--DATE 405
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 65/230 (28%), Positives = 100/230 (43%)
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC--AGVL 258
E+L L ANVDL+A T C A ++ R V D +E ++
Sbjct: 88 ELLDLEDNTEEEGANVDLDAQKTKC-----AVIKTSTRATYFLPVVGLVDPDELKPGDLV 142
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEI---PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
V + + + +R +E+ P + DIGG ++L +AV P+ H
Sbjct: 143 GVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDR 202
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F LGI P +G L++GPPG G +L M++G+ L+R+
Sbjct: 203 FVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262
Query: 376 FQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
F A+ AP+IIF DE D +G KR S +R + LL ++DG +
Sbjct: 263 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 82/257 (31%), Positives = 142/257 (55%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + IGG ++ L E + P+ + + LG+ P+G+L+YGP
Sbjct: 160 DSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGP 219
Query: 62 PGTGKTSLVRAVVREC-GAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT + RAV + L + P V + +G+ K +R+AF+ A A P+++
Sbjct: 220 PGTGKTMMARAVAAQTKSTFLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PAII 274
Query: 121 FIDEIDALCPRR-DHRR--EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAID 176
FIDE+DA+ +R D + +++V R +L +D +P+ + V+A+TNR+D +D
Sbjct: 275 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDD----IKVIAATNRIDVLD 330
Query: 177 PALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEAL 236
PAL RSGR D R I++++++K+ ++ +V+ E +A + + GA +A+
Sbjct: 331 PALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 237 CREATMSAVKRSSDANE 253
C EA M A++R DA E
Sbjct: 391 CVEAGMIALRR--DATE 405
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 65/230 (28%), Positives = 100/230 (43%)
Query: 201 EILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANEC--AGVL 258
E+L L ANVDL+A T C A ++ R V D +E ++
Sbjct: 88 ELLDLEDNTEEEGANVDLDAQKTKC-----AVIKTSTRATYFLPVVGLVDPDELKPGDLV 142
Query: 259 SVTMEDWRHARSVVGPSITRGVTVEI---PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTA 315
V + + + +R +E+ P + DIGG ++L +AV P+ H
Sbjct: 143 GVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDR 202
Query: 316 FSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNT 375
F LGI P +G L++GPPG G +L M++G+ L+R+
Sbjct: 203 FVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA 262
Query: 376 FQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
F A+ AP+IIF DE D +G KR S +R + LL ++DG +
Sbjct: 263 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 312
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 341 (125.1 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 96/278 (34%), Positives = 142/278 (51%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK R++S+ + K + G + A E L E++ F L + QKLG K P+G LL GP
Sbjct: 141 KSKARLLSDRSNKVTFHDVAGIDEAK-EELAEIVEF-LREPKKFQKLGGKIPKGCLLIGP 198
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L +A+ E IS + VG +R+ F Q +A P ++F
Sbjct: 199 PGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNA----PCLIF 254
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R + REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 255 IDEIDAVGRHRGVGFGGGNDEREQTL---NQLLVEMDGFEANEG----VIIIAATNRPDV 307
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +IL+++ KK+P NV++ IA G+ GADL
Sbjct: 308 LDPALLRPGRFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLA 367
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L E+ + A +R+ VT ED+ +AR +
Sbjct: 368 NLVNESALIAARRNKKV--------VTNEDFEYARDKI 397
Score = 201 (75.8 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 49/159 (30%), Positives = 77/159 (48%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S R ++ KVT+ D+ G+ + K++L + VE+ ++ F +LG +G LL GP
Sbjct: 140 GKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGP 198
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++ + AP +IF DE
Sbjct: 199 PGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEI 258
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
D VG RG E+ L+ LL EMDG E + +I
Sbjct: 259 DAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVI 297
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 82/228 (35%), Positives = 123/228 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE+I PLL ++G+ P+G LLYGPPGTGKT L RA+ + A+
Sbjct: 144 IGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDAN 203
Query: 81 -LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+S V K ++GES + +RE F+ A H +P ++F+DEIDA+ RR
Sbjct: 204 FLKVVSSAIVDK-YIGESARLIREMFAYARDH----QPCIIFMDEIDAIGGRRFSEGTSA 258
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D I L L++ ++ V ++ +TNR D +DPAL R GR D
Sbjct: 259 DREIQRTLMELLNQ-MDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++ + + +D EA+ + + GADL +C EA + A++
Sbjct: 318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALR 365
Score = 225 (84.3 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 56/175 (32%), Positives = 86/175 (49%)
Query: 261 TMEDWRHARSVVGPSITRGVTVEIP-KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRL 319
T+ R+ V P + +T E P V + +IGGL ++L++ +E P+ + F R+
Sbjct: 113 TLTIMRYLPREVDP-LVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRV 171
Query: 320 GISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRA 379
GISP +G LL+GPPG + + Y+GES L+R F A
Sbjct: 172 GISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYA 231
Query: 380 RLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
R P IIF DE D +G +R +++ +R L LL +MDG + Q K+I+
Sbjct: 232 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIM 286
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 85/248 (34%), Positives = 135/248 (54%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ + M + + IGG +E L E + P+ + + + LG+K P+G L+YGP
Sbjct: 183 DSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGP 242
Query: 62 PGTGKTSLVRAVVRECGA-HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVV 120
PGTGKT L RA + GA L + +P V + +G+ K +R+AF+ A A P+++
Sbjct: 243 PGTGKTLLARACAAQSGATFLKLAAPQLV-QMFIGDGAKLVRDAFALAKEKA----PTII 297
Query: 121 FIDEIDALCPRR-DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPAL 179
FIDE+DA+ +R D + D + + L++ S V V+A+TNRVD +DPAL
Sbjct: 298 FIDELDAIGTKRFDSDKSGDREVQRTMLELLNQ-LDGFGSDDRVKVLAATNRVDTLDPAL 356
Query: 180 RRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDAN-VDLEAIATSCNGYVGADLEALCR 238
RSGR D R +LK++ +K+ D N V+ +A S + + GA L+A+
Sbjct: 357 LRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTV 416
Query: 239 EATMSAVK 246
EA M A++
Sbjct: 417 EAGMIALR 424
Score = 223 (83.6 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 50/151 (33%), Positives = 76/151 (50%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +AV P+K + F LGI P +GAL++GPPG
Sbjct: 193 EKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLAR 252
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
+L M++G+ L+R+ F A+ AP+IIF DE D +G KR S
Sbjct: 253 ACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDS 312
Query: 403 SSTSITVGERLLSTLLTEMDGL---EQAKVI 430
+ +R + LL ++DG ++ KV+
Sbjct: 313 DKSGDREVQRTMLELLNQLDGFGSDDRVKVL 343
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 344 (126.2 bits), Expect = 3.7e-30, P = 3.7e-30
Identities = 92/260 (35%), Positives = 136/260 (52%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW + +GG ++ + + PLL+ GL+ G+LLYGPPGTGKT L +
Sbjct: 654 NVKW---DDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 72 AVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCP 130
AV EC + L+V P ++ ++GESEK +R+ F +A S +P V+F DE+D+L P
Sbjct: 710 AVATECSLNFLSVKGPELINM-YIGESEKNVRDIFEKARS----ARPCVIFFDELDSLAP 764
Query: 131 RR----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ SQ+ +D S + ++ ++NR D IDPAL R GRFD
Sbjct: 765 ARGASGDSGGVMD-RVVSQMLAEIDGLSDSSQDL---FIIGASNRPDLIDPALLRPGRFD 820
Query: 187 XXXXXXXXXXXX-RFEILKLYTKKVPLDANVDLEAIATSC-NGYVGADLEALCREATMSA 244
R +LK T+K L +V L ++A C + + GAD+ ALC +A A
Sbjct: 821 KLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQA 880
Query: 245 VKRSSDANECAGVLSVTMED 264
KR ++ +G + T ED
Sbjct: 881 AKRKVSKSD-SGDMP-TEED 898
Score = 265 (98.3 bits), Expect = 6.2e-29, Sum P(3) = 6.2e-29
Identities = 55/152 (36%), Positives = 82/152 (53%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
++P V W+D+GGL D+K + V+ P+ H FS G+ G LL+GPPG
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G EL +MY+GESE +R+ F++AR A P +IFFDE D + RG S
Sbjct: 710 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGAS 769
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKVIIYPI 434
+ V +R++S +L E+DGL + ++ I
Sbjct: 770 GDSG-GVMDRVVSQMLAEIDGLSDSSQDLFII 800
Score = 106 (42.4 bits), Expect = 6.2e-29, Sum P(3) = 6.2e-29
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 28 VEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPH 87
V L +++ PL S+ A KL + +LL+G PG GK ++V+ V R G H+ S H
Sbjct: 356 VNILASVLSPPLCPSALASKLRV----AVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCH 411
Query: 88 SVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
S+ + ++ AL + F+ A ++ P+++ + D
Sbjct: 412 SLLASSERKTSTALAQTFNMARRYS----PTILLLRHFD 446
Score = 58 (25.5 bits), Expect = 6.2e-29, Sum P(3) = 6.2e-29
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 153 NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPL 212
N+ K V+++AS + I P +RR F R E+L + V
Sbjct: 497 NEVGKFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSLNDEQRSEMLSQSLQGVSQ 554
Query: 213 DANVD----LEAIATSCNGYVGADLEALCREA 240
N+ ++ + +G++ DL+AL +A
Sbjct: 555 FLNISSDEFMKGLVGQTSGFLPRDLQALVADA 586
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 338 (124.0 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 98/278 (35%), Positives = 139/278 (50%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ R+M++ K ++ + G A E L E++ F L + + KLG K P+G LL G
Sbjct: 142 KSRARLMTDSRGKVTFDD-VAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGS 199
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E IS + VG +R+ F Q HA P ++F
Sbjct: 200 PGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHA----PCIIF 255
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+DEIDA+ R + REQ + +QL MD + ++ VV++A+TNR D
Sbjct: 256 VDEIDAVGRHRGIGLGGGNDEREQTL---NQLLVEMDGFESNEG----VVIIAATNRPDV 308
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +I+ ++ KKVPL +VDL IA G+ GADL
Sbjct: 309 LDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLA 368
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + VTM D+ +AR V
Sbjct: 369 NLVNEAALIAARLDKKI--------VTMCDFEYARDKV 398
Score = 202 (76.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 46/146 (31%), Positives = 74/146 (50%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++D+ G+ + K++L + V++ +KH F++LG +G LL G PG
Sbjct: 154 KVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIA 212
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G++ M+VG + +R+ F++ + AP IIF DE D VG RG
Sbjct: 213 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGG 272
Query: 406 SITVGERLLSTLLTEMDGLEQAKVII 431
E+ L+ LL EMDG E + ++
Sbjct: 273 GNDEREQTLNQLLVEMDGFESNEGVV 298
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 338 (124.0 bits), Expect = 5.1e-30, P = 5.1e-30
Identities = 98/278 (35%), Positives = 139/278 (50%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ R+M++ K ++ + G A E L E++ F L + + KLG K P+G LL G
Sbjct: 142 KSRARLMTDSRGKVTFDD-VAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGS 199
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RA+ E IS + VG +R+ F Q HA P ++F
Sbjct: 200 PGTGKTLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHA----PCIIF 255
Query: 122 IDEIDALCPRR-------DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+DEIDA+ R + REQ + +QL MD + ++ VV++A+TNR D
Sbjct: 256 VDEIDAVGRHRGIGLGGGNDEREQTL---NQLLVEMDGFESNEG----VVIIAATNRPDV 308
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +I+ ++ KKVPL +VDL IA G+ GADL
Sbjct: 309 LDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLA 368
Query: 235 ALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVV 272
L EA + A + VTM D+ +AR V
Sbjct: 369 NLVNEAALIAARLDKKI--------VTMCDFEYARDKV 398
Score = 202 (76.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 46/146 (31%), Positives = 74/146 (50%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXX 345
KVT++D+ G+ + K++L + V++ +KH F++LG +G LL G PG
Sbjct: 154 KVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIA 212
Query: 346 XXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
G++ M+VG + +R+ F++ + AP IIF DE D VG RG
Sbjct: 213 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGG 272
Query: 406 SITVGERLLSTLLTEMDGLEQAKVII 431
E+ L+ LL EMDG E + ++
Sbjct: 273 GNDEREQTLNQLLVEMDGFESNEGVV 298
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 74/228 (32%), Positives = 123/228 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ ++E+I P+ + + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 144 EMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 203
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + +GE + +RE F A HA PS++F+DEID++ R +
Sbjct: 204 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSRLEGGSGG 259
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + + ++ V+ +TNR+D +D AL R GR D
Sbjct: 260 DSEVQRTMLELLNQLDGFEAT-KNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 318
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 319 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 366
Score = 249 (92.7 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 55/159 (34%), Positives = 82/159 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E IGGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 126 VDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYG 185
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 186 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 245
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
D +G++ G S V +R + LL ++DG E K I
Sbjct: 246 IDSIGSRLEGGSGGDSEV-QRTMLELLNQLDGFEATKNI 283
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 84/265 (31%), Positives = 139/265 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ +RE + PLL+ +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 206 IGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSAT 265
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L ++ + K ++G+ + +R+ F A+ HA PS+VFIDEIDA+ +R D
Sbjct: 266 FLRIVGSELIQK-YLGDGPRLVRQIFQVAAEHA----PSIVFIDEIDAIGTKRYDSTSGG 320
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ V V+ +TN+++ +DPAL R GR D
Sbjct: 321 EREIQRTMLELLNQ-LDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNT 379
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+ +I L+T K+ L +VDL+ + GAD+ A+C EA + A++ +
Sbjct: 380 KKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERR--------M 431
Query: 259 SVTMEDWRHARSVVGPSITRGVTVE 283
V M+D+R AR + + G VE
Sbjct: 432 RVQMDDFRAARERIMKTKQDGGPVE 456
Score = 224 (83.9 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P ++ DIGGL ++++++VE P+ H + +GI P +G +L+G PG
Sbjct: 199 PTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 258
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+EL Y+G+ L+R FQ A APSI+F DE D +G KR S+S
Sbjct: 259 ANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTS 318
Query: 405 TSITVGERLLSTLLTEMDGLEQ---AKVII 431
+R + LL ++DG + KVI+
Sbjct: 319 GGEREIQRTMLELLNQLDGFDDRGDVKVIM 348
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 86/251 (34%), Positives = 140/251 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVREC-GA 79
IGG ++ L E + P+ + + + LG+ P+G++LYGPPGTGKT L RA +
Sbjct: 181 IGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKST 240
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L + P V + +G+ K +R+AF+ A A P+++FIDE+DA+ +R D +
Sbjct: 241 FLKLAGPQLV-QMFIGDGAKLVRDAFALAKEKA----PAIIFIDELDAIGTKRFDSEKAG 295
Query: 139 DVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ N S T+ + V+A+TNRVD + PAL RSGR D
Sbjct: 296 DREVQRTMLELLNQLNGFSSTA--DIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEE 352
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R I++++++K+ + +V+ E ++ S + + GA +A+C EA M A++RS AN
Sbjct: 353 ARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS--AN----- 405
Query: 258 LSVTMEDWRHA 268
SVT ED+ A
Sbjct: 406 -SVTHEDFMDA 415
Score = 217 (81.4 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 47/141 (33%), Positives = 69/141 (48%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P + DIGGL ++L +AV P+ H F LGI P +G +L+GPPG
Sbjct: 172 ERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLAR 231
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G +L M++G+ L+R+ F A+ AP+IIF DE D +G KR S
Sbjct: 232 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 291
Query: 403 SSTSITVGERLLSTLLTEMDG 423
+R + LL +++G
Sbjct: 292 EKAGDREVQRTMLELLNQLNG 312
>FB|FBgn0040208 [details] [associations]
symbol:Kat60 "Katanin 60" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;IDA;IMP;NAS]
[GO:0007017 "microtubule-based process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA;IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0070462 "plus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IGI] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IMP] [GO:0007019 "microtubule depolymerization"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031252
"cell leading edge" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005938 GO:GO:0005813
GO:GO:0005694 GO:GO:0031252 GO:GO:0030336 GO:GO:0022416
GO:GO:0035220 GO:GO:0000070 HSSP:Q01853 eggNOG:COG0464
GO:GO:0008017 GO:GO:0008568 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0031122 GO:GO:0000091 GO:GO:0070462
GO:GO:0008352 EMBL:AY071142 ProteinModelPortal:Q8SZ40 SMR:Q8SZ40
STRING:Q8SZ40 PaxDb:Q8SZ40 PRIDE:Q8SZ40 FlyBase:FBgn0040208
InParanoid:Q8SZ40 OrthoDB:EOG4573NX ChiTaRS:katanin-60
ArrayExpress:Q8SZ40 Bgee:Q8SZ40 Uniprot:Q8SZ40
Length = 572
Score = 335 (123.0 bits), Expect = 8.2e-30, P = 8.2e-30
Identities = 82/223 (36%), Positives = 119/223 (53%)
Query: 27 AVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISP 86
A L E + P+L + + W +G+L+ GPPGTGKT L +AV ECG +S
Sbjct: 301 AKRLLEEAVVLPMLMPDYFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSS 359
Query: 87 HSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV--RIAS 144
++ + GESEK +R F A +A PS +FIDEID+LC RR E + R+ S
Sbjct: 360 ATLTSKYRGESEKMVRLLFEMARFYA----PSTIFIDEIDSLCSRRGSESEHEASRRVKS 415
Query: 145 QLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILK 204
+L MD + V+V+A+TN ID ALRR R + R +LK
Sbjct: 416 ELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSDEGREALLK 473
Query: 205 LYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
+ ++V +D +VDL +A GY GAD+ +CREA+M +++R
Sbjct: 474 INLREVKVDDSVDLTYVANELKGYSGADITNVCREASMMSMRR 516
Score = 223 (83.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 60/170 (35%), Positives = 83/170 (48%)
Query: 267 HARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVR 325
H + + + R + + PKV W DI L D K+ L++AV P+ F GI P +
Sbjct: 270 HIEAELVDILERDILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFK--GIRRPWK 327
Query: 326 GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPS 385
G L+ GPPG A L S Y GESE ++R F+ AR APS
Sbjct: 328 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPS 387
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL----EQAKVII 431
IF DE D + ++RG S + R+ S LL +MDG+ EQAKV++
Sbjct: 388 TIFIDEIDSLCSRRGSESEHEAS--RRVKSELLVQMDGVGGGEEQAKVVM 435
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 80/254 (31%), Positives = 130/254 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 143 EMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTE 202
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 203 CTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARLETGTG 258
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + L++ + + ++ V+ +TNR+D +D AL R GR D
Sbjct: 259 DSEVQRTMLELLNQLDGFEAT-KNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEA 317
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++ +
Sbjct: 318 RLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERR--------V 369
Query: 259 SVTMEDWRHARSVV 272
VT ED+ A S V
Sbjct: 370 HVTQEDFEMAVSKV 383
Score = 238 (88.8 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E +GGL +++++ +E P+KH F LGI+ +G LL+G
Sbjct: 125 VDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYG 184
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 185 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 244
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
D +G+ R + + V +R + LL ++DG E K I
Sbjct: 245 IDSIGSARLETGTGDSEV-QRTMLELLNQLDGFEATKNI 282
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 335 (123.0 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 94/253 (37%), Positives = 134/253 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+S+ ++++E + E+ G + A E L E+I F L + KLG + P+G+LL GP
Sbjct: 137 KSRAKLLTEAQGRVTFEDVAGVDEAK-EELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGP 194
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RAV E G IS + VG +R+ F Q +A P ++F
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNA----PCIIF 250
Query: 122 IDEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ R H REQ + +QL MD + ++ V+++A+TNR D
Sbjct: 251 IDEIDAVGRHRGAGLGGGHDEREQTL---NQLLVEMDGFESNEG----VILIAATNRPDV 303
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R ILK++TKK PL ++VDL IA G+ GADL
Sbjct: 304 LDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLS 363
Query: 235 ALCREATMSAVKR 247
+ EA + A ++
Sbjct: 364 NVVNEAALLAARK 376
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 49/159 (30%), Positives = 79/159 (49%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + +T +VT+ED+ G+ + K++L++ +++ +K F++LG +G LL GP
Sbjct: 136 GKSRAKLLTEAQGRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGP 194
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F + + AP IIF DE
Sbjct: 195 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
D VG RG E+ L+ LL EMDG E + +I
Sbjct: 255 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVI 293
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 341 (125.1 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 87/244 (35%), Positives = 127/244 (52%)
Query: 4 KGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPG 63
KG + KW + IGG + L+E I +P Y Q L+ G+LLYGP G
Sbjct: 854 KGIKLHSSEIKW---QDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTG 910
Query: 64 TGKTSLVRAVVRECGAH-LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GKT L A+ ECG + ++V P ++K ++G SE+ +R+ FS+ASS KP V+F
Sbjct: 911 CGKTLLASAIAGECGLNFISVKGPELLNK-YIGSSEQGVRDVFSRASS----AKPCVLFF 965
Query: 123 DEIDALCPRRDHRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
DE D++ PRR H R+ +Q T +D + + V V+A+T+R D IDPAL R
Sbjct: 966 DEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVE----GLTGVYVLAATSRPDLIDPALLR 1021
Query: 182 SGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREAT 241
GR D R +IL K+ L ++ LE ++T+ Y GADL AL A
Sbjct: 1022 PGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQ 1081
Query: 242 MSAV 245
+ ++
Sbjct: 1082 LKSI 1085
Score = 294 (108.6 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 90/347 (25%), Positives = 162/347 (46%)
Query: 96 ESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR-RDHRREQDVRIASQLFTLMDSN- 153
+S K S +S + P ++ ++ +D + D +R QL + + S
Sbjct: 662 KSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPNDQDPGSKIR-CEQLVSHIKSLC 720
Query: 154 -KPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTK---K 209
K S P +V++A+ ++ +++ F R EIL+ Y K K
Sbjct: 721 FKYQNRSSP-IVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGK 779
Query: 210 VPLDA-NVDLEAIATSCNGYVGADLEALC-REATMSAVKR------SSDANECAGVLSVT 261
D +++L + S GY+G D+E + R +S++K ++D N+ ++ +
Sbjct: 780 QLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIEFS 839
Query: 262 MEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGI 321
+ + A+ P +G+ + ++ W+DIGGL ++ L++ +EWP K+ F
Sbjct: 840 IIE--KAKEGYTPITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPKLFQS--- 894
Query: 322 SPVR---GALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQR 378
SP+R G LL+GP GC G EL + Y+G SE +R+ F R
Sbjct: 895 SPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSR 954
Query: 379 ARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
A A P ++FFDE D + +RG +S +T +R+++ LT++DG+E
Sbjct: 955 ASSAKPCVLFFDEFDSIAPRRGHDNS-GVT--DRVVNQFLTQLDGVE 998
Score = 50 (22.7 bits), Expect = 4.8e-25, Sum P(2) = 4.8e-25
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 4 KGRIMSEHNEKW-KAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWP--RGLLLYG 60
K + + ++NE + + IGG ++ +E ++ + + L P G+++ G
Sbjct: 550 KKKSLEDYNEIGDRLFQRIGGMEKQIKQAKEFLSLYMYKDLSVIREQLNTPGVNGMIIAG 609
Query: 61 PPGTGKTSLVRAV 73
G+GK+ L ++
Sbjct: 610 SHGSGKSLLATSL 622
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 78/230 (33%), Positives = 127/230 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + +RE + PL + + +++G+ PRG+LLYGPPGTGKT L +AV A
Sbjct: 152 IGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAA 211
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ V+ V K ++GE + +R+ F A ++ P+++FIDEIDA+ +R D +
Sbjct: 212 FIRVVGSEFVQK-YLGEGPRLVRDVFRLARENS----PAIIFIDEIDAIATKRFDAQTGA 266
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + L L++ SV +V V+ +TNR D +DPAL R GR D
Sbjct: 267 DREVQRILMELLNQMDGFDVSV-NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQ 325
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ I ++ T K+ L VDLE + + GA+++++C+EA M A++++
Sbjct: 326 KRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKN 375
Score = 240 (89.5 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 52/152 (34%), Positives = 80/152 (52%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E P ++ DIGG K+++++AVE P+ H + ++GI P RG LL+GPPG
Sbjct: 143 EKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAK 202
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G+E Y+GE L+R+ F+ AR +P+IIF DE D + KR +
Sbjct: 203 AVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDA 262
Query: 403 SSTSITVGERLLSTLLTEMDGLE---QAKVII 431
+ + +R+L LL +MDG + KVI+
Sbjct: 263 QTGADREVQRILMELLNQMDGFDVSVNVKVIM 294
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 336 (123.3 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 87/232 (37%), Positives = 121/232 (52%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+ G A E L E++ F L + +LG K PRG+LL GPPGTGKT L RAV E
Sbjct: 269 VQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVP 327
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+S + +VG K +RE F+ A A PS++FIDE+DA+ +R+ R +
Sbjct: 328 FFFMSGSQFDEMYVGVGAKRVRELFAAARKQA----PSIIFIDELDAIGQKRNARDAAHM 383
Query: 141 R-IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
R +QL +D ++ VV + +TN +++DPAL R GRFD R
Sbjct: 384 RQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGR 443
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
IL +T+ VPL +VDL IA +G+ GADL L +A + A K S A
Sbjct: 444 LAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTA 495
Score = 206 (77.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 48/151 (31%), Positives = 76/151 (50%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXX 346
V + D+ G+ + K++L++ V++ ++ T F+RLG RG LL GPPG
Sbjct: 264 VRFSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAG 322
Query: 347 XXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
G++ MYVG +R F AR APSIIF DE D +G KR +
Sbjct: 323 EANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAAH 382
Query: 407 ITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
+ + L+ LL ++DG + + + +P+ FI
Sbjct: 383 M---RQTLNQLLVDLDGFSKNEDLAHPVVFI 410
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 336 (123.3 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 116/405 (28%), Positives = 187/405 (46%)
Query: 51 KWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASS 110
++P L+ GP GK+ L+ +R + I+ V +++ GE+E+ LR F A +
Sbjct: 218 RFPTTALVVGPVDCGKSGLLSEFLRRHSCNCFYITASQVLRSYPGETEEELRRIFQAAQT 277
Query: 111 -----------HALSGK-----------PSVVFIDEIDALCPRR---DHRREQD-VRIAS 144
H++ P V+ I++++ LCP D + + +RI++
Sbjct: 278 FKEKLRPLCNFHSVCFTFEILISFIFIVPIVILIEDLELLCPSTAVADAKNSSNSLRISA 337
Query: 145 QLFTLMDSNKPSKTSVPHVVVVASTNRV-DAIDPALRRSGRFDXXXXXXXXXXXXRFEIL 203
+L+ L+D+ +P ++ +T+ V D++ RR RF R +++
Sbjct: 338 ELYKLLDA-------LPRGIICLATSGVPDSLHEHARR--RFVREVTINMPSEGQRRQLV 388
Query: 204 KLYTKKVPLDANVDL-EAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTM 262
+ + L+ + L E IA + GYV ADL L R + + E + S++
Sbjct: 389 EHLCEVHELNISQTLLEHIARNTQGYVIADLTLLLRRVQQQLLTKDDFDIEHIFLKSLSQ 448
Query: 263 EDWRHARSVVGPSITRGVTVEIPKVT--WEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
PS +R V + K+T +E IGG+ LK+ LQ +V I+ S AF+R G
Sbjct: 449 TQ---------PSASRSTDVRVSKMTAGFEVIGGMEALKRTLQVSVLAGIRQSAAFARFG 499
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+S +G LL+GPPGC AE+YS YVG +E + F AR
Sbjct: 500 LSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTAR 559
Query: 381 LAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
AP +IF DE D +VG + S V R+LSTLLTEM+G+
Sbjct: 560 KNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRILSTLLTEMNGI 604
Score = 333 (122.3 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 85/240 (35%), Positives = 123/240 (51%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG A L+ + + S+ + GL P+G+LLYGPPG KT++ + + +E
Sbjct: 469 EVIGGMEALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEAD 528
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
S V+ +VG +E+ + F A +A P ++F+DEID+L RR
Sbjct: 529 MTFIATSAAEVYSPYVGCAERFISRIFDTARKNA----PCLIFLDEIDSLVGRRTVSSGG 584
Query: 137 ---EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXX 193
+ +RI S L T M+ S H++VVA+TNR D ID AL R GRFD
Sbjct: 585 GGGQVQLRILSTLLTEMNGIVGGG-SQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPA 643
Query: 194 XXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
R +LKL+++++P NV L+ IA + Y GADL LC EA + A +R A E
Sbjct: 644 PDEKSRLALLKLHSQRMPFHENVFLQEIAARTDRYSGADLCNLCNEAAIEAFQRDFKATE 703
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 334 (122.6 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 89/253 (35%), Positives = 134/253 (52%)
Query: 2 ESKGRIMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGP 61
+SK ++ ++ +K + + G + E L E++ F L + ++G + P+G+LL GP
Sbjct: 146 KSKAKLYNDEKKKVRFRDVAGADEEKQE-LVEVVEF-LKDPRKFAEVGARIPKGVLLVGP 203
Query: 62 PGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVF 121
PGTGKT L RAV E G IS + VG +R+ F A +A P ++F
Sbjct: 204 PGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNA----PCIIF 259
Query: 122 IDEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
IDEIDA+ +R H REQ + +QL MD ++ ++++A+TNR D
Sbjct: 260 IDEIDAVGRQRGAGLGGGHDEREQTL---NQLLVEMDGFGANEG----IIIIAATNRPDI 312
Query: 175 IDPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+DPAL R GRFD R +LK++ + PLD N++L AIAT G+ GADLE
Sbjct: 313 LDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLE 372
Query: 235 ALCREATMSAVKR 247
L EA + A ++
Sbjct: 373 NLLNEAALVAARQ 385
Score = 193 (73.0 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 48/149 (32%), Positives = 71/149 (47%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXX 342
E KV + D+ G + K++L + VE+ +K F+ +G +G LL GPPG
Sbjct: 155 EKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLAR 213
Query: 343 XXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
G++ M+VG + +R+ F+ A+ AP IIF DE D VG +RG
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG 273
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKVII 431
E+ L+ LL EMDG + II
Sbjct: 274 LGGGHDEREQTLNQLLVEMDGFGANEGII 302
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 77/232 (33%), Positives = 125/232 (53%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 148 EMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 207
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
+S + + +GE + +RE F A HA PS++F+DEID++ R
Sbjct: 208 CTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSSRIESGSG 263
Query: 137 -EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXX 194
+ +V R +L +D + +K ++ V+ +TNR+D +DPAL R GR D
Sbjct: 264 GDSEVQRTMLELLNQLDGFEATK----NIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 319
Query: 195 XXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L ++L IA G GA+++ +C EA M A++
Sbjct: 320 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 371
Score = 250 (93.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 54/159 (33%), Positives = 82/159 (51%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + ++P T+E +GGL K++++ +E P+KH F LGI+ +G LL+G
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL ++GE ++R F AR APSIIF DE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
D +G+ R S S + +R + LL ++DG E K I
Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNI 288
Score = 39 (18.8 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 210 VPLDANVDLEAIATSC 225
V LD N+D+ + +C
Sbjct: 96 VDLDKNIDINDVTPNC 111
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 79/254 (31%), Positives = 137/254 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG + ++ ++E + PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 193 IGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSAT 252
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ + +R+ F+ A H+ PS+VFIDEIDA+ +R D +
Sbjct: 253 FLRVVGSELIQK-YLGDGPRLVRQLFNAAEEHS----PSIVFIDEIDAIGTKRYDAQSGA 307
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ TS + V+ +TNR+ +DPAL R GR D
Sbjct: 308 EREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEAT 367
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+ +I ++T K+ L +V+LE + + GA+++A+ EA + A++ +
Sbjct: 368 KRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERR--------M 419
Query: 259 SVTMEDWRHARSVV 272
V M+D+R AR V
Sbjct: 420 RVVMDDFRQAREKV 433
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXX 344
P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G PG
Sbjct: 186 PTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 245
Query: 345 XXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
G+EL Y+G+ L+R F A +PSI+F DE D +G KR + S
Sbjct: 246 ANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQS 305
Query: 405 TSITVGERLLSTLLTEMDGLEQAK 428
+ +R + LL ++DG + ++
Sbjct: 306 GAEREIQRTMLELLNQLDGFDTSQ 329
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 331 (121.6 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 87/233 (37%), Positives = 131/233 (56%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ G + +E L EL+ F L + ++ G+K P+G+L+ GPPG GKT + +AV E G
Sbjct: 153 DVAGVDEVKME-LSELVDF-LQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAG 210
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-- 136
S S + +VG K +RE FS+A A PS+VFIDEIDA+ R
Sbjct: 211 VPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMA----PSIVFIDEIDAVGKARGEMSNV 266
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXX 196
E+D + +QL T MD + + V+V+A+TN+++ +DPAL RSGRFD
Sbjct: 267 ERDSTL-NQLLTQMDGFEDNSG----VIVIAATNKIELMDPALLRSGRFDRRIFLSLPDF 321
Query: 197 XXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
R +IL++Y K + N++L IA + G+ GA LE L EA ++A++R+S
Sbjct: 322 KDRLKILEIYMKDK--NNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNS 372
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXX 343
I +T+ D+ G+ ++K +L + V++ +++ + G+ +G L+ GPPG
Sbjct: 146 ISNITFNDVAGVDEVKMELSELVDF-LQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKA 204
Query: 344 XXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
G+ +YVG +R F +A++ APSI+F DE D VG RG S
Sbjct: 205 VAGEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMS 264
Query: 404 STSITVGERLLSTLLTEMDGLEQAKVII 431
+ + L+ LLT+MDG E +I
Sbjct: 265 NVE---RDSTLNQLLTQMDGFEDNSGVI 289
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 336 (123.3 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 86/225 (38%), Positives = 124/225 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+ G A + L+EL+ F LL + LG K P+G+LL GPPGTGKT L RAV E G
Sbjct: 317 VHGCDEAKDELQELVEF-LLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVP 375
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+S + +VG K +RE F+QA S + P+++FIDE+DA+ +R+ R V
Sbjct: 376 FFYMSGSEFDEVYVGVGAKRVRELFNQARSKS----PAIIFIDELDAIGAKRNERDAAYV 431
Query: 141 R-IASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR 199
+ +QL T +D S T V +++A+TN + +D AL R GRFD R
Sbjct: 432 KQTLNQLLTELDGFSQS-TGV---IILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGR 487
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSA 244
+ILK + K V + +VD+ IA +G+ GADLE L +A + A
Sbjct: 488 MDILKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFA 532
Score = 210 (79.0 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 55/175 (31%), Positives = 85/175 (48%)
Query: 257 VLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAF 316
VLS+ +E +++ GP + E V + D+ G + K +LQ+ VE+ + + F
Sbjct: 283 VLSIVLETTGVLKNIKGPH-SNEAQPEHQTVRFSDVHGCDEAKDELQELVEF-LLNPERF 340
Query: 317 SRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTF 376
S LG +G LL GPPG G+E +YVG +R F
Sbjct: 341 SSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELF 400
Query: 377 QRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
+AR +P+IIF DE D +GAKR + + ++ L+ LLTE+DG Q+ +I
Sbjct: 401 NQARSKSPAIIFIDELDAIGAKRNERDAAYV---KQTLNQLLTELDGFSQSTGVI 452
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 81/254 (31%), Positives = 135/254 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 186 IGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 245
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 246 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAVGTKRYDSNSGG 300
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 301 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 359
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVL 258
+ I ++T ++ L +V+L + + + GAD++A+C EA + A++ +
Sbjct: 360 KRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERR--------M 411
Query: 259 SVTMEDWRHARSVV 272
VT ED++ ++ V
Sbjct: 412 KVTNEDFKKSKESV 425
Score = 237 (88.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/161 (32%), Positives = 82/161 (50%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 168 PMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 227
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 228 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
VG KR S+S +R + LL ++DG + KVI+
Sbjct: 288 AVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 328
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 76/222 (34%), Positives = 127/222 (57%)
Query: 30 ALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA-HLTVISPHS 88
+L E I P+ + + + LG++ P+G+L+YGPPGTGKT L RA + A L + P
Sbjct: 214 SLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQL 273
Query: 89 VHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQDVRIASQLF 147
V + +G+ K +R+AF+ A A PS++FIDE+DA+ +R D + D + +
Sbjct: 274 V-QMFIGDGAKLVRDAFALAKEKA----PSIIFIDELDAIGTKRFDSEKAGDREVQRTML 328
Query: 148 TLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXRFEILKLYT 207
L++ + + V V+A+TNRVD +DPAL RSGR D R I+++++
Sbjct: 329 ELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 387
Query: 208 KKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
+K+ + +V+ E +A + + GA +A+C EA M A++R +
Sbjct: 388 RKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 429
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 46/136 (33%), Positives = 65/136 (47%)
Query: 298 LKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXG 357
L L +A+ P+ H F LGI P +G L++GPPG G
Sbjct: 211 LSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 270
Query: 358 AELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTL 417
+L M++G+ L+R+ F A+ APSIIF DE D +G KR S +R + L
Sbjct: 271 PQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 330
Query: 418 LTEMDGLE---QAKVI 430
L ++DG + Q KVI
Sbjct: 331 LNQLDGFQPNTQVKVI 346
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 186 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 245
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 246 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 300
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 301 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 359
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 360 KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 416
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 168 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 227
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 228 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 288 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 328
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 185 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 244
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 245 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 299
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 300 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 358
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 359 KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 415
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 167 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 226
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 227 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 286
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 287 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 327
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 326 (119.8 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 84/230 (36%), Positives = 125/230 (54%)
Query: 27 AVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISP 86
A + LRE + P+ + + W +G+L+ GPPGTGKT L +AV ECG +S
Sbjct: 215 AKKLLREAVVLPMWMPDFFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSS 273
Query: 87 HSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV--RIAS 144
++ + GESEK +R F A +A P+ +FIDEID++C RR E + R+ S
Sbjct: 274 STLTSKYRGESEKLVRLLFEMARFYA----PATIFIDEIDSICSRRGTSDEHEASRRVKS 329
Query: 145 QLFTLMD-------SNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+L MD ++ PSK V+V+A+TN ID ALRR R +
Sbjct: 330 ELLVQMDGVGGALENDDPSKM----VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAK 383
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R E+LK+ ++V LD ++ LE IA GY GAD+ +CR+A++ A++R
Sbjct: 384 GRAELLKINLREVELDPDISLEEIAEKIEGYSGADITNVCRDASLMAMRR 433
Score = 199 (75.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 51/151 (33%), Positives = 73/151 (48%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVRGALLHGPP 333
++ R + P + W+DI L + KK L++AV P+ F GI P +G L+ GPP
Sbjct: 192 ALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPP 249
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G + L S Y GESE L+R F+ AR AP+ IF DE D
Sbjct: 250 GTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPATIFIDEID 309
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ ++RG S + R+ S LL +MDG+
Sbjct: 310 SICSRRGTSDEHEAS--RRVKSELLVQMDGV 338
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 324 (119.1 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 87/247 (35%), Positives = 125/247 (50%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW E IGG + + + I PL + GLK G+L YGPPGTGKT L +
Sbjct: 811 NVKW---EDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAK 866
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ + + + ++GESE +R F +A KP V+F DE+D++ P+
Sbjct: 867 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPCVIFFDELDSVAPK 922
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R ++ + RI SQL +D S V VV +TNR D +D AL R GRFD
Sbjct: 923 RGNQGDSGGVMDRIVSQLLAELDGM--SSEGGDGVFVVGATNRPDLLDEALLRPGRFDKM 980
Query: 189 XXXXXXXXXXR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVK 246
+ +IL+ T+K LD NV+LE +A C+ + GAD ALC ++ ++A+
Sbjct: 981 LYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLNAMT 1040
Query: 247 RSSDANE 253
R ANE
Sbjct: 1041 RV--ANE 1045
Score = 276 (102.2 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 71/224 (31%), Positives = 109/224 (48%)
Query: 215 NVDLEAIATSCNGYVGADLEALCREATMSAVKR----SSDANEC---------AGVLSVT 261
+++ + +A G DL ++ +++ A+KR S D+ GV++
Sbjct: 726 DINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQNIVNIGNGGVINWV 785
Query: 262 MEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
+D+ A + + + IP V WEDIGGL +K ++ ++ P+KH F+ G
Sbjct: 786 PDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-G 844
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ G L +GPPG G EL +MY+GESEA +R FQRAR
Sbjct: 845 LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRAR 904
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
A P +IFFDE D V KRG + V +R++S LL E+DG+
Sbjct: 905 DAKPCVIFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGM 947
Score = 81 (33.6 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 51/224 (22%), Positives = 89/224 (39%)
Query: 45 AQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT------VISPHSVHKAH---VG 95
A K+ LK LL G GKT+LVR E G +L +++P K G
Sbjct: 543 ASKINLKTSI-LLTSMSRGIGKTTLVRNSCIELGLNLIELDCFDLLNPGQELKTIGLLTG 601
Query: 96 ESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKP 155
+ +K + S +S H V+++ I+ LCP+ D + S ++
Sbjct: 602 KIDKLIANVQSTSSFH-------VIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHD 654
Query: 156 SKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR-FEIL------KLYTK 208
+ ++V+V S N D ++ L+ +F F+ L K +TK
Sbjct: 655 YLKTYRNLVIVMSCNDYDKLNDNLKSIIKFTIEFTVPSENERLEIFKFLINNEKNKTFTK 714
Query: 209 KV---PLDANVDL--EAIATSCNGYVGADLEALCREATMSAVKR 247
+ P D+ + +A G DL ++ +++ A+KR
Sbjct: 715 DINSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKR 758
Score = 41 (19.5 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
A E + V MED+ A++ + PS++ KV E+ G ++ K+ QQ
Sbjct: 1075 ATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVR-ENFEGGKEKAKQQQQ 1127
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 324 (119.1 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 87/247 (35%), Positives = 125/247 (50%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW E IGG + + + I PL + GLK G+L YGPPGTGKT L +
Sbjct: 811 NVKW---EDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAK 866
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ + + + ++GESE +R F +A KP V+F DE+D++ P+
Sbjct: 867 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPCVIFFDELDSVAPK 922
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXX 188
R ++ + RI SQL +D S V VV +TNR D +D AL R GRFD
Sbjct: 923 RGNQGDSGGVMDRIVSQLLAELDGM--SSEGGDGVFVVGATNRPDLLDEALLRPGRFDKM 980
Query: 189 XXXXXXXXXXR-FEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATMSAVK 246
+ +IL+ T+K LD NV+LE +A C+ + GAD ALC ++ ++A+
Sbjct: 981 LYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLNAMT 1040
Query: 247 RSSDANE 253
R ANE
Sbjct: 1041 RV--ANE 1045
Score = 276 (102.2 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 71/224 (31%), Positives = 109/224 (48%)
Query: 215 NVDLEAIATSCNGYVGADLEALCREATMSAVKR----SSDANEC---------AGVLSVT 261
+++ + +A G DL ++ +++ A+KR S D+ GV++
Sbjct: 726 DINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQNIVNIGNGGVINWV 785
Query: 262 MEDWRHARSVVGPSITRGVTV-EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLG 320
+D+ A + + + IP V WEDIGGL +K ++ ++ P+KH F+ G
Sbjct: 786 PDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-G 844
Query: 321 ISPVRGALLHGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRAR 380
+ G L +GPPG G EL +MY+GESEA +R FQRAR
Sbjct: 845 LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRAR 904
Query: 381 LAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
A P +IFFDE D V KRG + V +R++S LL E+DG+
Sbjct: 905 DAKPCVIFFDELDSVAPKRGNQGDSG-GVMDRIVSQLLAELDGM 947
Score = 81 (33.6 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 51/224 (22%), Positives = 89/224 (39%)
Query: 45 AQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLT------VISPHSVHKAH---VG 95
A K+ LK LL G GKT+LVR E G +L +++P K G
Sbjct: 543 ASKINLKTSI-LLTSMSRGIGKTTLVRNSCIELGLNLIELDCFDLLNPGQELKTIGLLTG 601
Query: 96 ESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKP 155
+ +K + S +S H V+++ I+ LCP+ D + S ++
Sbjct: 602 KIDKLIANVQSTSSFH-------VIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHD 654
Query: 156 SKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXXR-FEIL------KLYTK 208
+ ++V+V S N D ++ L+ +F F+ L K +TK
Sbjct: 655 YLKTYRNLVIVMSCNDYDKLNDNLKSIIKFTIEFTVPSENERLEIFKFLINNEKNKTFTK 714
Query: 209 KV---PLDANVDL--EAIATSCNGYVGADLEALCREATMSAVKR 247
+ P D+ + +A G DL ++ +++ A+KR
Sbjct: 715 DINSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKR 758
Score = 41 (19.5 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 251 ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
A E + V MED+ A++ + PS++ KV E+ G ++ K+ QQ
Sbjct: 1075 ATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVR-ENFEGGKEKAKQQQQ 1127
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 81/231 (35%), Positives = 132/231 (57%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG A V+ ++E I PL + +++G+K P+G++LYG PGTGKT L +AV + A
Sbjct: 186 IGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSAT 245
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
L V+ + K ++G+ K +RE F A A PS+VFIDEIDA+ +R D +
Sbjct: 246 FLRVVGSELIQK-YLGDGPKLVRELFRVADECA----PSIVFIDEIDAVGTKRYDSQSGG 300
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
E+++ R +L +D ++T V V+ +TNR++ +DPAL R GR D
Sbjct: 301 EREIQRTMLELLNQLDGFD-ARTDVK---VIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ +I +++T K+ L +V+LE S + GAD++A+C E+ + A++
Sbjct: 357 IKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALR 407
Score = 227 (85.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 51/163 (31%), Positives = 79/163 (48%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P + + P ++ DIGGL +++++A+E P+ H + +GI P +G +L+G
Sbjct: 166 VDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYG 225
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PG G+EL Y+G+ L+R F+ A APSI+F DE
Sbjct: 226 EPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDE 285
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE---QAKVII 431
D VG KR S S +R + LL ++DG + KVI+
Sbjct: 286 IDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIM 328
Score = 39 (18.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 61 PPGT--GKTSLVRAVVRECGAHLTVISPHS 88
PP T GK R E L VI+PHS
Sbjct: 25 PPPTQFGKKKKRRGA--ETSTKLPVITPHS 52
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 77/228 (33%), Positives = 121/228 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E +RE++ P+L+ + KLG+ P+G+L YGPPGTGKT L RAV A
Sbjct: 170 VGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDAC 229
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ VI V K +VGE + +RE F A S K +VF DE+DA+ R D
Sbjct: 230 FIRVIGSELVQK-YVGEGARMVRELFQMARSK----KACIVFFDEVDAIGGARFDDGVGG 284
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
D + + +++ + ++ V+ +TNR D +DPAL R GR D
Sbjct: 285 DNEVQRTMLEIVNQ-LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +I K++T+ + + ++ E +A C GAD+ ++C EA M A++
Sbjct: 344 RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
Score = 242 (90.2 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 49/154 (31%), Positives = 75/154 (48%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P VT+ D+GG ++ +K+++ VE P+ H F +LGI P +G L +G
Sbjct: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R FQ AR I+FFDE
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
D +G R +R + ++ ++DG +
Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD 303
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 114 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 173
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 174 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 228
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 229 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 287
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 288 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 344
Score = 238 (88.8 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 96 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 155
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 156 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 215
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 216 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 256
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/237 (33%), Positives = 129/237 (54%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG ++ ++E + PL + +++G+K P+G++LYGPPGTGKT L +AV + A
Sbjct: 187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSAT 246
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A HA PS+VFIDEIDA+ +R D
Sbjct: 247 FLRVVGSELIQK-YLGDGPKLVRELFRVAEEHA----PSIVFIDEIDAIGTKRYDSNSGG 301
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++ +DPAL R GR D
Sbjct: 302 EREIQRTMLELLNQ-LDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 360
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK--RSSDANE 253
+ I +++T ++ L +V L+ + + + GAD++A+C EA + A++ R NE
Sbjct: 361 KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 417
Score = 238 (88.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/161 (32%), Positives = 83/161 (51%)
Query: 274 PSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
P +T + P+ T+ DIGGL + ++++++VE P+ H + +GI P +G +L+GPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G G+EL Y+G+ L+R F+ A APSI+F DE D
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
+G KR S+S +R + LL ++DG + KVI+
Sbjct: 289 AIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIM 329
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 79/228 (34%), Positives = 126/228 (55%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
IGG A ++ ++E + PL + + +G+K P+G++LYG PGTGKT L +AV A
Sbjct: 190 IGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSAT 249
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
L V+ + K ++G+ K +RE F A LS PS+VFIDEIDA+ +R D
Sbjct: 250 FLRVVGSELIQK-YLGDGPKLVRELFRVADD--LS--PSIVFIDEIDAVGTKRYDAHSGG 304
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXXX 198
+ I + L++ S V V+ +TNR++++DPAL R GR D
Sbjct: 305 EREIQRTMLELLNQ-LDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 363
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R I +++T K+ L +V+LE + + + GAD++A+C EA + A++
Sbjct: 364 RRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALR 411
Score = 217 (81.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 50/163 (30%), Positives = 80/163 (49%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
V P ++ + P ++ DIGGL +++++AVE P+ H + +GI P +G +L+G
Sbjct: 170 VDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYG 229
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PG G+EL Y+G+ L+R F+ A +PSI+F DE
Sbjct: 230 EPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDE 289
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ---AKVII 431
D VG KR + S +R + LL ++DG + KVI+
Sbjct: 290 IDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL 332
>MGI|MGI:2387638 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2387638 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:BC030434 IPI:IPI00114980
RefSeq:NP_705800.1 UniGene:Mm.397405 ProteinModelPortal:Q8K0T4
SMR:Q8K0T4 PhosphoSite:Q8K0T4 PaxDb:Q8K0T4 PRIDE:Q8K0T4
Ensembl:ENSMUST00000047257 GeneID:231912 KEGG:mmu:231912
UCSC:uc009aow.2 GeneTree:ENSGT00550000074466 InParanoid:Q8K0T4
NextBio:380863 Bgee:Q8K0T4 CleanEx:MM_KATNAL1 Genevestigator:Q8K0T4
GermOnline:ENSMUSG00000041298 Uniprot:Q8K0T4
Length = 488
Score = 325 (119.5 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 85/230 (36%), Positives = 125/230 (54%)
Query: 27 AVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISP 86
A + LRE + P+ + + W +G+L+ GPPGTGKT L +AV ECG +S
Sbjct: 214 AKKLLREAVVLPMWMPDFFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSS 272
Query: 87 HSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV--RIAS 144
++ + GESEK +R F A +A P+ +FIDEID++C RR E + R+ S
Sbjct: 273 STLTSKYRGESEKLVRLLFEMARFYA----PTTIFIDEIDSICSRRGTSDEHEASRRVKS 328
Query: 145 QLFTLMD-------SNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+L MD ++ PSK V+V+A+TN ID ALRR R +
Sbjct: 329 ELLIQMDGVGGALENDDPSKM----VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAK 382
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R E+LK+ ++V LD +V LE IA GY GAD+ +CR+A++ A++R
Sbjct: 383 GRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRR 432
Score = 198 (74.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 51/151 (33%), Positives = 73/151 (48%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVRGALLHGPP 333
++ R + P + W+DI L + KK L++AV P+ F GI P +G L+ GPP
Sbjct: 191 ALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPP 248
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G + L S Y GESE L+R F+ AR AP+ IF DE D
Sbjct: 249 GTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEID 308
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ ++RG S + R+ S LL +MDG+
Sbjct: 309 SICSRRGTSDEHEAS--RRVKSELLIQMDGV 337
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 334 (122.6 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 88/249 (35%), Positives = 135/249 (54%)
Query: 8 MSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKT 67
+S H + + EE G + + +E L E++ F + + ++G + P+G+LL GPPG+GKT
Sbjct: 139 VSPHFKPIRFEEIAGIDESKLELL-EVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 68 SLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
L RAV E S + +VG+ K +R+ F+ HA S PS+VFIDEIDA
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFA----HARSVAPSIVFIDEIDA 252
Query: 128 LCPRRDH-------RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR 180
+ +R +RE D + +QL MD ++ H++V+ +TNR+D +D AL
Sbjct: 253 IGGKRSSGSVNGAGQREHDQTL-NQLLVEMDGF----SNTVHIMVIGATNRIDTLDSALL 307
Query: 181 RSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANV-DLEAIATSCNGYVGADLEALCRE 239
R GRFD R +IL++Y KK+ D + D+E IA G+ GADLE + E
Sbjct: 308 RPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNE 367
Query: 240 ATMSAVKRS 248
AT+ A + +
Sbjct: 368 ATILATRNN 376
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 46/146 (31%), Positives = 67/146 (45%)
Query: 280 VTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
V+ + +E+I G+ + K +L + V++ IK+ + +G +G LL GPPG
Sbjct: 139 VSPHFKPIRFEEIAGIDESKLELLEVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKTM 197
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
G E +YVG+ +R F AR APSI+F DE D +G KR
Sbjct: 198 LARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKR 257
Query: 400 GGSSSTSITVGE--RLLSTLLTEMDG 423
S E + L+ LL EMDG
Sbjct: 258 SSGSVNGAGQREHDQTLNQLLVEMDG 283
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 334 (122.6 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 88/249 (35%), Positives = 135/249 (54%)
Query: 8 MSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKT 67
+S H + + EE G + + +E L E++ F + + ++G + P+G+LL GPPG+GKT
Sbjct: 139 VSPHFKPIRFEEIAGIDESKLELL-EVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKT 196
Query: 68 SLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
L RAV E S + +VG+ K +R+ F+ HA S PS+VFIDEIDA
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFA----HARSVAPSIVFIDEIDA 252
Query: 128 LCPRRDH-------RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALR 180
+ +R +RE D + +QL MD ++ H++V+ +TNR+D +D AL
Sbjct: 253 IGGKRSSGSVNGAGQREHDQTL-NQLLVEMDGF----SNTVHIMVIGATNRIDTLDSALL 307
Query: 181 RSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANV-DLEAIATSCNGYVGADLEALCRE 239
R GRFD R +IL++Y KK+ D + D+E IA G+ GADLE + E
Sbjct: 308 RPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNE 367
Query: 240 ATMSAVKRS 248
AT+ A + +
Sbjct: 368 ATILATRNN 376
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 46/146 (31%), Positives = 67/146 (45%)
Query: 280 VTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCXXXX 339
V+ + +E+I G+ + K +L + V++ IK+ + +G +G LL GPPG
Sbjct: 139 VSPHFKPIRFEEIAGIDESKLELLEVVDF-IKNREKYHEMGARMPKGVLLVGPPGSGKTM 197
Query: 340 XXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
G E +YVG+ +R F AR APSI+F DE D +G KR
Sbjct: 198 LARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKR 257
Query: 400 GGSSSTSITVGE--RLLSTLLTEMDG 423
S E + L+ LL EMDG
Sbjct: 258 SSGSVNGAGQREHDQTLNQLLVEMDG 283
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 330 (121.2 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 102/302 (33%), Positives = 146/302 (48%)
Query: 4 KGRIMSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPP 62
K R +EK + A + G E L E++ F L + +LG + P+G+LL+G P
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQP 200
Query: 63 GTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GTGKT L RA+ E G IS + VG +R+ F QA +A P +VFI
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNA----PCIVFI 256
Query: 123 DEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
DEIDA+ +R H REQ + +QL MD ++ ++++A+TNR D +
Sbjct: 257 DEIDAVGRQRGAGLGGGHDEREQTL---NQLLVEMDGFNSNEG----IIIIAATNRPDIL 309
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
DPAL R GRFD R EILK++ K PL +VDL+ +A G+ GADL
Sbjct: 310 DPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLAN 369
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHA--RSVVGPSITRGVTVEIPK--VTWED 291
+ EA + A +R+ + ME+ A R + GP V E K V + +
Sbjct: 370 MVNEAALLAARRNKKV--------INMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHE 421
Query: 292 IG 293
G
Sbjct: 422 AG 423
Score = 204 (76.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 49/159 (30%), Positives = 79/159 (49%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + T E +VT+ D+ G+ ++K++L + VE+ +K+ ++ LG +G LL G
Sbjct: 141 GKSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQ 199
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 200 PGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEI 259
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
D VG +RG E+ L+ LL EMDG + II
Sbjct: 260 DAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGII 298
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 330 (121.2 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 102/302 (33%), Positives = 146/302 (48%)
Query: 4 KGRIMSEHNEKWKAEEA-IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPP 62
K R +EK + A + G E L E++ F L + +LG + P+G+LL+G P
Sbjct: 142 KSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQP 200
Query: 63 GTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFI 122
GTGKT L RA+ E G IS + VG +R+ F QA +A P +VFI
Sbjct: 201 GTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNA----PCIVFI 256
Query: 123 DEIDALCPRRD------H-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
DEIDA+ +R H REQ + +QL MD ++ ++++A+TNR D +
Sbjct: 257 DEIDAVGRQRGAGLGGGHDEREQTL---NQLLVEMDGFNSNEG----IIIIAATNRPDIL 309
Query: 176 DPALRRSGRFDXXXXXXXXXXXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
DPAL R GRFD R EILK++ K PL +VDL+ +A G+ GADL
Sbjct: 310 DPALLRPGRFDRHIVVDTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLAN 369
Query: 236 LCREATMSAVKRSSDANECAGVLSVTMEDWRHA--RSVVGPSITRGVTVEIPK--VTWED 291
+ EA + A +R+ + ME+ A R + GP V E K V + +
Sbjct: 370 MVNEAALLAARRNKKV--------INMEEMEEAIERVIAGPEKKSKVISEREKRLVAYHE 421
Query: 292 IG 293
G
Sbjct: 422 AG 423
Score = 204 (76.9 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 49/159 (30%), Positives = 79/159 (49%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G S + T E +VT+ D+ G+ ++K++L + VE+ +K+ ++ LG +G LL G
Sbjct: 141 GKSRAKLHTDEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQ 199
Query: 333 PGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG G++ M+VG + +R+ F++A+ AP I+F DE
Sbjct: 200 PGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEI 259
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
D VG +RG E+ L+ LL EMDG + II
Sbjct: 260 DAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFNSNEGII 298
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 84/239 (35%), Positives = 127/239 (53%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA- 79
+GG + +E LRE++ PLL + KLG+ P+G+LLYGPPGTGKT RAV A
Sbjct: 188 VGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDAT 247
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRR-- 136
+ VI V K +VGE + +RE F A + K ++F DE+DA+ R D
Sbjct: 248 FIRVIGSELVQK-YVGEGARMVRELFEMARTK----KACIIFFDEVDAIGGARFDDGAGG 302
Query: 137 EQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXX 195
+ +V R +L T +D P ++ V+ +TNR + +DPAL R GR D
Sbjct: 303 DNEVQRTMLELITQLDGFDPRG----NIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 358
Query: 196 XXXRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK-RSSDANE 253
R I ++++K + ++ ++ E I+ C GA+L ++C EA M A++ R ANE
Sbjct: 359 LEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANE 417
Score = 251 (93.4 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 52/154 (33%), Positives = 77/154 (50%)
Query: 272 VGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHG 331
+ PS+T E P VT+ D+GG ++ +KL++ VE P+ F +LGI P +G LL+G
Sbjct: 168 IDPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYG 227
Query: 332 PPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDE 391
PPG G+EL YVGE ++R F+ AR IIFFDE
Sbjct: 228 PPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDE 287
Query: 392 ADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
D +G R + +R + L+T++DG +
Sbjct: 288 VDAIGGARFDDGAGGDNEVQRTMLELITQLDGFD 321
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 73/229 (31%), Positives = 124/229 (54%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG ++ ++E+I P+ + LG+ P+G+LLYGPPGTGKT L RAV
Sbjct: 175 EMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTE 234
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
+S + + +GE + +RE F A HA PS++F+DEID++ R + R
Sbjct: 235 CTFIRVSGSELVQKFIGEGARMVRELFVMAREHA----PSIIFMDEIDSIGSSRVEGSRG 290
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
D + + L++ + + ++ V+ +TNR+D +D AL R GR D
Sbjct: 291 GDSEVQRTMLELLNQLDGFEAT-KNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEK 349
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R +ILK++++K+ L + ++ IA G GA+++++C EA M A++
Sbjct: 350 ARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALR 398
Score = 247 (92.0 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 54/161 (33%), Positives = 82/161 (50%)
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
S V P ++ + ++P T+E +GGL K++++ +E P+KH F LGI+ +G LL
Sbjct: 155 SKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 214
Query: 330 HGPPGCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPG G+EL ++GE ++R F AR APSIIF
Sbjct: 215 YGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFM 274
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVI 430
DE D +G+ R S + +R + LL ++DG E K I
Sbjct: 275 DEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNI 315
>RGD|1359252 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1359252
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874 HOVERGEN:HBG057074
CTD:84056 KO:K07767 OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 GeneTree:ENSGT00550000074466 EMBL:BC083673
IPI:IPI00370842 RefSeq:NP_001006957.1 RefSeq:XP_003751164.1
RefSeq:XP_003752600.1 UniGene:Rn.208215 ProteinModelPortal:Q5XIK7
PRIDE:Q5XIK7 Ensembl:ENSRNOT00000001219 GeneID:100910196
GeneID:288449 KEGG:rno:100910196 KEGG:rno:288449 UCSC:RGD:1359252
InParanoid:Q5XIK7 NextBio:628096 Genevestigator:Q5XIK7
GermOnline:ENSRNOG00000000916 Uniprot:Q5XIK7
Length = 488
Score = 324 (119.1 bits), Expect = 4.9e-29, P = 4.9e-29
Identities = 84/230 (36%), Positives = 125/230 (54%)
Query: 27 AVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISP 86
A + LRE + P+ + + W +G+L+ GPPGTGKT L +AV ECG +S
Sbjct: 214 AKKLLREAVVLPMWMPDFFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSS 272
Query: 87 HSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV--RIAS 144
++ + GESEK +R F A +A P+ +FIDEID++C RR E + R+ S
Sbjct: 273 STLTSKYRGESEKLVRLLFEMARFYA----PTTIFIDEIDSICSRRGTSDEHEASRRVKS 328
Query: 145 QLFTLMD-------SNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+L MD ++ PSK V+V+A+TN ID ALRR R +
Sbjct: 329 ELLIQMDGVGGALENDDPSKM----VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAK 382
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R E+LK+ ++V LD ++ LE IA GY GAD+ +CR+A++ A++R
Sbjct: 383 GRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRR 432
Score = 198 (74.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 51/151 (33%), Positives = 73/151 (48%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVRGALLHGPP 333
++ R + P + W+DI L + KK L++AV P+ F GI P +G L+ GPP
Sbjct: 191 ALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPP 248
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G + L S Y GESE L+R F+ AR AP+ IF DE D
Sbjct: 249 GTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEID 308
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ ++RG S + R+ S LL +MDG+
Sbjct: 309 SICSRRGTSDEHEAS--RRVKSELLIQMDGV 337
>UNIPROTKB|E1BHF2 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:DAAA02033094
IPI:IPI00710392 RefSeq:NP_001179847.1 UniGene:Bt.104141
ProteinModelPortal:E1BHF2 PRIDE:E1BHF2 Ensembl:ENSBTAT00000012297
GeneID:537739 KEGG:bta:537739 NextBio:20877204 Uniprot:E1BHF2
Length = 490
Score = 324 (119.1 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 84/230 (36%), Positives = 125/230 (54%)
Query: 27 AVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISP 86
A + LRE + P+ + + W +G+L+ GPPGTGKT L +AV ECG +S
Sbjct: 216 AKKLLREAVVLPMWMPDFFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSS 274
Query: 87 HSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV--RIAS 144
++ + GESEK +R F A +A P+ +FIDEID++C RR E + R+ S
Sbjct: 275 STLTSKYRGESEKLVRLLFEMARFYA----PTTIFIDEIDSICSRRGTSDEHEASRRVKS 330
Query: 145 QLFTLMD-------SNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+L MD ++ PSK V+V+A+TN ID ALRR R +
Sbjct: 331 ELLIQMDGVGGALENDDPSKM----VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAK 384
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R E+LK+ ++V LD ++ LE IA GY GAD+ +CR+A++ A++R
Sbjct: 385 GRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRR 434
Score = 199 (75.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 52/151 (34%), Positives = 73/151 (48%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVRGALLHGPP 333
++ R + P V W+DI L + KK L++AV P+ F GI P +G L+ GPP
Sbjct: 193 ALERDIVSRNPSVHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPP 250
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G + L S Y GESE L+R F+ AR AP+ IF DE D
Sbjct: 251 GTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEID 310
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ ++RG S + R+ S LL +MDG+
Sbjct: 311 SICSRRGTSDEHEAS--RRVKSELLIQMDGV 339
>UNIPROTKB|F6V168 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 Ensembl:ENSCAFT00000010676
EMBL:AAEX03014230 RefSeq:XP_543146.2 ProteinModelPortal:F6V168
GeneID:486020 KEGG:cfa:486020 Uniprot:F6V168
Length = 490
Score = 324 (119.1 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 84/230 (36%), Positives = 125/230 (54%)
Query: 27 AVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISP 86
A + LRE + P+ + + W +G+L+ GPPGTGKT L +AV ECG +S
Sbjct: 216 AKKLLREAVVLPMWMPDFFKGIRRPW-KGVLMVGPPGTGKTMLAKAVATECGTTFFNVSS 274
Query: 87 HSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV--RIAS 144
++ + GESEK +R F A +A P+ +FIDEID++C RR E + R+ S
Sbjct: 275 STLTSKYRGESEKLVRLLFEMARFYA----PTTIFIDEIDSICSRRGTSDEHEASRRVKS 330
Query: 145 QLFTLMD-------SNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDXXXXXXXXXXX 197
+L MD ++ PSK V+V+A+TN ID ALRR R +
Sbjct: 331 ELLIQMDGVGGALENDDPSKM----VMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAK 384
Query: 198 XRFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
R E+LK+ ++V LD ++ LE IA GY GAD+ +CR+A++ A++R
Sbjct: 385 GRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRR 434
Score = 198 (74.8 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 51/151 (33%), Positives = 73/151 (48%)
Query: 275 SITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGIS-PVRGALLHGPP 333
++ R + P + W+DI L + KK L++AV P+ F GI P +G L+ GPP
Sbjct: 193 ALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPP 250
Query: 334 GCXXXXXXXXXXXXXXXXXXXXXGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
G + L S Y GESE L+R F+ AR AP+ IF DE D
Sbjct: 251 GTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEID 310
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ ++RG S + R+ S LL +MDG+
Sbjct: 311 SICSRRGTSDEHEAS--RRVKSELLIQMDGV 339
WARNING: HSPs involving 451 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 441 408 0.00079 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 701
No. of states in DFA: 618 (66 KB)
Total size of DFA: 236 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.47u 0.11s 31.58t Elapsed: 00:00:02
Total cpu time: 31.55u 0.12s 31.67t Elapsed: 00:00:02
Start: Fri May 10 23:44:06 2013 End: Fri May 10 23:44:08 2013
WARNINGS ISSUED: 2