BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013506
(441 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPR1|CD48B_ARATH Cell division control protein 48 homolog B OS=Arabidopsis thaliana
GN=CDC48B PE=2 SV=1
Length = 603
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/421 (78%), Positives = 370/421 (87%), Gaps = 8/421 (1%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
NEKW+AE IGGN A++ALRELI FP Y +A+ LGLKWPRGLLLYGPPGTGKTSLVR
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AVV+EC AHL V+SPHSVH+AH GESEK LREAF++ASSHA+S KPSV+FIDEID LCPR
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 132 RDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEV 191
RD RREQDVRIASQLFTLMDSNKPS +S P VVVVASTNRVDAIDPALRR+GRFDA VEV
Sbjct: 135 RDARREQDVRIASQLFTLMDSNKPS-SSAPRVVVVASTNRVDAIDPALRRAGRFDALVEV 193
Query: 192 TVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
+ P E+R +IL+LYTKKV LD +VDL+AIA SCNGYVGADLEALCREAT+SA KRSSD+
Sbjct: 194 STPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDS 253
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIK 311
L +T +D++ A+SVVGPSI RG+TVEIPKVTW+D+GGL+DLKKKLQQAVEWPIK
Sbjct: 254 ------LILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIK 307
Query: 312 HSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEAL 371
HS AF ++GISP+RG LLHGPPGCSKTTLAKAAA+AA+ASFFSLS AEL+SMYVGE EAL
Sbjct: 308 HSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEAL 367
Query: 372 LRNTFQRARLAAPSIIFFDEADVVGAKRGG-SSSTSITVGERLLSTLLTEMDGLEQAKVI 430
LRNTFQRARLA+PSIIFFDEADVV KRG SSS S TVGERLLSTLLTEMDGLE+AK I
Sbjct: 368 LRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGI 427
Query: 431 I 431
+
Sbjct: 428 L 428
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 140/262 (53%), Gaps = 19/262 (7%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + + L++ + +P+ +S+ K+G+ RG+LL+GPPG KT+L +A A
Sbjct: 288 VGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQAS 347
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL-CPRRDHRREQD 139
+S + +VGE E LR F +A PS++F DE D + C R D
Sbjct: 348 FFSLSCAELFSMYVGEGEALLRNTFQRARL----ASPSIIFFDEADVVACKRGDESSSNS 403
Query: 140 V----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPT 195
R+ S L T MD + +K ++V+A+TNR AID AL R GRFD + V P
Sbjct: 404 STVGERLLSTLLTEMDGLEEAKG----ILVLAATNRPYAIDAALMRPGRFDLVLYVPPPD 459
Query: 196 AEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
E RFEIL+++T+ + L +VDL IA + + GA+LE LCRE+ +++ E
Sbjct: 460 LEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLR------ENI 513
Query: 256 GVLSVTMEDWRHARSVVGPSIT 277
+V ++ A+S + P++T
Sbjct: 514 AATAVFNRHFQTAKSSLKPALT 535
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/423 (46%), Positives = 282/423 (66%), Gaps = 20/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG + V+ +RE+I P+ + +KLG++ P+G+LL GPPGTGKT L +AV E G
Sbjct: 179 EDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAG 238
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A+ VI+ + +VGE+E+ LR+ F +A +A PS++FIDEIDA+ P+RD E
Sbjct: 239 ANFYVINGPEIMSKYVGETEENLRKIFEEAEENA----PSIIFIDEIDAIAPKRDEATGE 294
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ +QL TLMD K VVV+ +TNR +A+DPALRR GRFD E+ + VP E
Sbjct: 295 VERRLVAQLLTLMDGLKGRG----QVVVIGATNRPNALDPALRRPGRFDREIVIGVPDRE 350
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---SSD---- 250
R EIL+++T+ +PL +VDL+ +A +G+VGADL ALC+EA M A++R S D
Sbjct: 351 GRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAE 410
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L VTM+D++ A V PS R V VE+P V WEDIGGL ++K++L++AVEW
Sbjct: 411 EIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEW 470
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P+K F ++G+ P +G LL GPPG KT LAKA A+ + A+F S+ G E++S +VGES
Sbjct: 471 PLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGES 530
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
E +R F++AR +AP IIFFDE D + KRG S+++T +++++ LLTE+DG+E+ K
Sbjct: 531 EKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVT--DKVVNQLLTELDGMEEPK 588
Query: 429 VII 431
++
Sbjct: 589 DVV 591
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 143/239 (59%), Gaps = 13/239 (5%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW E IGG + LRE + +PL +K+G++ P+G+LL+GPPGTGKT L +
Sbjct: 448 NVKW---EDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAK 504
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV E GA+ + + VGESEKA+RE F +A A P ++F DEIDA+ P+
Sbjct: 505 AVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSA----PCIIFFDEIDAIAPK 560
Query: 132 RDHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEV 189
R V ++ +QL T +D + K VVV+A+TNR D IDPAL R GR D +
Sbjct: 561 RGRDLSSAVTDKVVNQLLTELDGMEEPK----DVVVIAATNRPDIIDPALLRPGRLDRVI 616
Query: 190 EVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
V VP + R +I K++T+ + L +V+LE +A GY GAD+EALCREA M AV+ S
Sbjct: 617 LVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRES 675
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 107/171 (62%), Gaps = 6/171 (3%)
Query: 255 AGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHST 314
AG + VT D+ H P ++ ++P VT+EDIGGL++ KK+++ +E P++H
Sbjct: 147 AGPVRVT--DFTHVELKEEP-VSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPE 203
Query: 315 AFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRN 374
F +LGI P +G LL GPPG KT LAKA A+ A A+F+ ++G E+ S YVGE+E LR
Sbjct: 204 LFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRK 263
Query: 375 TFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
F+ A APSIIF DE D + KR ++ V RL++ LLT MDGL+
Sbjct: 264 IFEEAEENAPSIIFIDEIDAIAPKRDEATG---EVERRLVAQLLTLMDGLK 311
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/423 (47%), Positives = 272/423 (64%), Gaps = 20/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG + + +RE+I PL + Q+LG++ P+G+LLYGPPGTGKT + +AV E
Sbjct: 182 EDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVD 241
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RRE 137
AH IS + + GESE+ LRE F +A +A PS++FIDEID++ P+R+ E
Sbjct: 242 AHFIPISGPEIMSKYYGESEQRLREIFEEAKENA----PSIIFIDEIDSIAPKREEVTGE 297
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ +QL LMD + V+V+A+TNR DAIDPALRR GRFD E+E+ VP E
Sbjct: 298 VERRVVAQLLALMDGLEARG----DVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKE 353
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR-----SSDAN 252
R EIL+++T+K+PL +VDLE +A NG+VGADLEALC+EA M A++R +A
Sbjct: 354 GRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAE 413
Query: 253 ECAGV----LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L VT ED+ A + PS R V VE+P V WEDIGGL K++L +AVEW
Sbjct: 414 EIPAEVIENLKVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEW 473
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P+K+ F I P RG LL GPPG KT LAKA A+ + A+F S+ G EL S +VGES
Sbjct: 474 PLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGES 533
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
E +R F++AR AP +IFFDE D + +RGG + +T ER++S LLTE+DGLE+ K
Sbjct: 534 EKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVT--ERVVSQLLTELDGLEELK 591
Query: 429 VII 431
++
Sbjct: 592 DVV 594
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 153/276 (55%), Gaps = 20/276 (7%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N KW E IGG A + L E + +PL Y + +K PRG+LL+GPPGTGKT L +
Sbjct: 451 NVKW---EDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAK 507
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV E A+ + + VGESEK +RE F +A A P V+F DEID+L PR
Sbjct: 508 AVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVA----PCVIFFDEIDSLAPR 563
Query: 132 RDHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEV 189
R + V R+ SQL T +D + K VVV+A+TNR D IDPAL R GR + +
Sbjct: 564 RGGIGDSHVTERVVSQLLTELDGLEELK----DVVVIAATNRPDMIDPALLRPGRLERHI 619
Query: 190 EVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR-- 247
+ P + R EI K++ + PL +V++E +A GY GAD+EA+CREA M A++
Sbjct: 620 YIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELI 679
Query: 248 -----SSDANECAGVLSVTMEDWRHARSVVGPSITR 278
+A E A L +T + + A V PS+T+
Sbjct: 680 KPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTK 715
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKA 343
+P VT+EDIGGL+ + +++ +E P+KH F RLGI P +G LL+GPPG KT +AKA
Sbjct: 176 VPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKA 235
Query: 344 AAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
A+ +A F +SG E+ S Y GESE LR F+ A+ APSIIF DE D + KR
Sbjct: 236 VANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR---E 292
Query: 404 STSITVGERLLSTLLTEMDGLE 425
+ V R+++ LL MDGLE
Sbjct: 293 EVTGEVERRVVAQLLALMDGLE 314
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/430 (44%), Positives = 287/430 (66%), Gaps = 15/430 (3%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRGLLLYGPPGTGKT
Sbjct: 343 EQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL 128
+ RAV E GA+++VI+ + GE+E LR+ F++A+ PS++FIDE+DAL
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLR----HPSIIFIDELDAL 458
Query: 129 CPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDA 187
CP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 459 CPKREGAQSEVEKRVVASLLTLMDGIG-SEGSEGRVLVLGATNRPQALDAALRRPGRFDK 517
Query: 188 EVEVTVPTAEERFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
E+E+ +P A++R +IL+ ++VP L +L +A + +GYVGADL+ALC EA + A++
Sbjct: 518 EIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALR 577
Query: 247 R------SSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKK 300
R + ++ AG++ +T+ D+ + + PS R V +++P V+W DIGGL ++K
Sbjct: 578 RVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKL 637
Query: 301 KLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAEL 360
KL+QAVEWP+KH +F+R+GI P +G LL+GPPGCSKT +AKA A+ + +F ++ G EL
Sbjct: 638 KLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697
Query: 361 YSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTE 420
+ YVGESE +R F++AR APSIIFFDE D + +R GSSS + V +R+L+ LLTE
Sbjct: 698 MNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVER-GSSSGAGNVADRVLAQLLTE 756
Query: 421 MDGLEQAKVI 430
MDG+EQ K +
Sbjct: 757 MDGIEQLKNV 766
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 140/259 (54%), Gaps = 17/259 (6%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L++ + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 629 IGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 688
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I + +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 689 FLAIKGPELMNKYVGESERAVREIFRKARAVA----PSIIFFDELDALAVERGSSSGAGN 744
Query: 141 ---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
R+ +QL T MD + K +V V+A+TNR D ID AL R GR D + V +P A
Sbjct: 745 VADRVLAQLLTEMDGIEQLK----NVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAA 800
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R EIL L +P+ VDL+ + + Y GA++ A+C+EA + A++ + A +C
Sbjct: 801 TRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKA-DC--- 856
Query: 258 LSVTMEDWRHARSVVGPSI 276
+ + A S+V P I
Sbjct: 857 --IMKRHFTQALSIVTPRI 873
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 274/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P A
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
+ R ILK +K P+ +VDLE +A NG+ GADL +C+ A
Sbjct: 649 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 274/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P A
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
+ R ILK +K P+ +VDLE +A NG+ GADL +C+ A
Sbjct: 649 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 274/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P A
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
+ R ILK +K P+ +VDLE +A NG+ GADL +C+ A
Sbjct: 649 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 274/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P A
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
+ R ILK +K P+ +VDLE +A NG+ GADL +C+ A
Sbjct: 649 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 274/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P +
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 12/234 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S
Sbjct: 649 DEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 273/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P A
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++L+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSTKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
+ R ILK +K P+ +VDLE +A NG+ GADL +C+ A
Sbjct: 649 DEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/428 (45%), Positives = 284/428 (66%), Gaps = 15/428 (3%)
Query: 10 EHNEKWKAE-EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTS 68
E + ++K + IGG + ++A+RE+I PL + G+ PRG+LLYGPPGTGKT
Sbjct: 343 EQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTM 402
Query: 69 LVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDAL 128
+ RAV E GA+++VI+ + GE+E LR+ F++A+ PS++FIDE+DAL
Sbjct: 403 IARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLR----HPSIIFIDELDAL 458
Query: 129 CPRRDH-RREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDA 187
CP+R+ + E + R+ + L TLMD S+ S V+V+ +TNR A+D ALRR GRFD
Sbjct: 459 CPKREGAQNEVEKRVVASLLTLMDGIG-SEVSEGQVLVLGATNRPHALDAALRRPGRFDK 517
Query: 188 EVEVTVPTAEERFEILKLYTKKVP-LDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
E+E+ VP A++R +IL+ ++VP L +L +A S +GYVGADL+ LC EA + A++
Sbjct: 518 EIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALR 577
Query: 247 R--SSDAN----ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKK 300
R N + AG++ +T++D+ A + + PS R + +++P V+W DIGGL +K
Sbjct: 578 RILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKL 637
Query: 301 KLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAEL 360
KL+QAVEWP+KH +F R+GI P +G LL+GPPGCSKT +AKA A+ + +F ++ G EL
Sbjct: 638 KLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697
Query: 361 YSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTE 420
+ YVGESE +R TF++AR APSIIFFDE D + +R GSS + V +R+L+ LLTE
Sbjct: 698 MNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVER-GSSLGAGNVADRVLAQLLTE 756
Query: 421 MDGLEQAK 428
MDG+EQ K
Sbjct: 757 MDGIEQLK 764
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 17/259 (6%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L + + +PL + ++G++ P+G+LLYGPPG KT + +A+ E G +
Sbjct: 629 IGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN 688
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I + +VGESE+A+RE F +A + A PS++F DE+DAL R
Sbjct: 689 FLAIKGPELMNKYVGESERAVRETFRKARAVA----PSIIFFDELDALAVERGSSLGAGN 744
Query: 141 ---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
R+ +QL T MD + K V ++A+TNR D ID AL R GR D + V +P A
Sbjct: 745 VADRVLAQLLTEMDGIEQLK----DVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAA 800
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGV 257
R EI KL +P+ VDL+ + + Y GA++ A+CREA + A++ AN
Sbjct: 801 TRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQAN----- 855
Query: 258 LSVTMEDWRHARSVVGPSI 276
+ + A S V P I
Sbjct: 856 -LIMKRHFTQALSTVTPRI 873
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/423 (43%), Positives = 271/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + S + +G+K PRG+L+YGPPGTGKT + RAV E G
Sbjct: 201 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 260
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A ++ P+++FIDEIDA+ P+RD E
Sbjct: 261 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNS----PAIIFIDEIDAIAPKRDKTHGE 316
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K S H++V+A+TNR ++IDPALRR GRFD E+++ +P A
Sbjct: 317 VERRIVSQLLTLMDGMKKSS----HLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDAT 372
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R E+L+++TK + L +VDLE IA +G+VGADL +LC EA + ++ D
Sbjct: 373 GRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDD 432
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTME++R+A + PS R VE+P TW DIGGL +KK+LQ+ V++
Sbjct: 433 KIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQY 492
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G+ P RG L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 493 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 552
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R+ F +AR AAP ++FFDE D + RGG+ + +R+++ +LTEMDG+ K
Sbjct: 553 EANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKK 612
Query: 429 VII 431
+
Sbjct: 613 NVF 615
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 14/236 (5%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + + L+EL+ +P+ + + K G++ RG+L YGPPG GKT L +A+ EC A+
Sbjct: 476 IGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN 535
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----DHR 135
+ + GESE +R+ F +A S A P V+F DE+D++ R D
Sbjct: 536 FISVKGPELLTMWFGESEANVRDIFDKARSAA----PCVLFFDELDSIAKARGGNVGDAG 591
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPT 195
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 592 GAAD-RVINQILTEMDGMGAKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 646
Query: 196 AEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA 251
+ R ILK +K PL VDL IA G+ GADL +C+ A A++++ +A
Sbjct: 647 DKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEA 702
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
V ++DIGG R ++++ VE P++H + F +G+ P RG L++GPPG KT +A+A A+
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 347 AAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
A FF ++G E+ S GESE+ LR F+ A +P+IIF DE D + KR T
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR---DKTH 314
Query: 407 ITVGERLLSTLLTEMDGLEQAKVII 431
V R++S LLT MDG++++ +I
Sbjct: 315 GEVERRIVSQLLTLMDGMKKSSHLI 339
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 273/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P A
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P +TWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 12/234 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNVGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD +S +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDG----MSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ R ILK +K P+ +VDL+ +A NG+ GADL +C+ A A++ S
Sbjct: 649 DEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG+R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 274/423 (64%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + ++E++ PL + + + +G+K PRG+LLYGPPGTGKT + RAV E G
Sbjct: 204 DDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 263
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A +A P+++FIDE+DA+ P+R+ E
Sbjct: 264 AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNA----PAIIFIDELDAIAPKREKTHGE 319
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K HV+V+A+TNR ++IDPALRR GRFD EV++ +P +
Sbjct: 320 VERRIVSQLLTLMDGLKQRA----HVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE +A +G+VGADL ALC EA + A+++ D
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDE 435
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTM+D+R A S PS R VE+P+VTWEDIGGL D+K++LQ+ V++
Sbjct: 436 TIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY 495
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G++P +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 496 PVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 555
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR AAP ++FFDE D + RGG+ +R+++ +LTEMDG+ K
Sbjct: 556 EANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKK 615
Query: 429 VII 431
+
Sbjct: 616 NVF 618
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 123/234 (52%), Gaps = 12/234 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L+EL+ +P+ + + K G+ +G+L YGPPG GKT L +A+ EC
Sbjct: 477 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ 536
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ I + GESE +RE F +A A P V+F DE+D++ R
Sbjct: 537 ANFISIKGPELLTMWFGESEANVREIFDKARQAA----PCVLFFDELDSIAKARGGNIGD 592
Query: 139 DV----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVP 194
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 593 GGGAADRVINQILTEMDGMSIKK----NVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 195 TAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ R ILK +K P+ +VD++ +A NG+ GADL +C+ A A++ S
Sbjct: 649 DEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +G+ P RG LL+GPPG KT +A+A A
Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA 259
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A AP+IIF DE D + KR T
Sbjct: 260 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR---EKT 316
Query: 406 SITVGERLLSTLLTEMDGLEQ-AKVII 431
V R++S LLT MDGL+Q A VI+
Sbjct: 317 HGEVERRIVSQLLTLMDGLKQRAHVIV 343
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/433 (43%), Positives = 269/433 (62%), Gaps = 19/433 (4%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +REL+ PL + + +G+K PRG+L+YGPPGTGKT +
Sbjct: 216 ENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLM 275
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ + GESE LR+AF +A ++ P+++FIDEID++
Sbjct: 276 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDSIA 331
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAE 188
P+R+ E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD E
Sbjct: 332 PKREKTNGEVERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRFGRFDRE 387
Query: 189 VEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
V++ +P R EIL ++TK + L +VDLE IA +GYVG+DL +LC EA M ++
Sbjct: 388 VDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREK 447
Query: 249 SD---------ANECAGVLSVTMEDWRHARSVVGPSITRGV-TVEIPKVTWEDIGGLRDL 298
D E L VTME++R+A V PS R V VE+P V WEDIGGL ++
Sbjct: 448 MDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEV 507
Query: 299 KKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGA 358
K++L ++V++P+ H F + G+SP RG L +GPPG KT LAKA A+ A+F S+ G
Sbjct: 508 KRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGP 567
Query: 359 ELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLL 418
EL SM+ GESE+ +R+ F +AR AAP ++F DE D + RGGS + +R+++ LL
Sbjct: 568 ELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLL 627
Query: 419 TEMDGLEQAKVII 431
TEMDG+ K +
Sbjct: 628 TEMDGMTSKKNVF 640
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 143/279 (51%), Gaps = 26/279 (9%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N +W E IGG L E + +P+ + + QK GL RG+L YGPPGTGKT L +
Sbjct: 495 NVRW---EDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAK 551
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV EC A+ + + GESE +R+ F +A + A P VVF+DE+D++
Sbjct: 552 AVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAA----PCVVFLDELDSIAKS 607
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD TS +V V+ +TNR + +D AL R GR D
Sbjct: 608 RGGSVGDAGGASD-RVVNQLLTEMDG----MTSKKNVFVIGATNRPEQLDAALVRPGRLD 662
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
V V +P R ILK +K P+ ++VD+E IA+ +G+ GADL + + A A+K
Sbjct: 663 TLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIK 722
Query: 247 RSSDAN-------ECAGVLSVTMEDWRHARSVVGPSITR 278
S A E AG V MED V P +TR
Sbjct: 723 ESISAEIERQKQREAAGE-DVKMEDEEEGEDPV-PELTR 759
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 266/423 (62%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E G
Sbjct: 208 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 267
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E
Sbjct: 268 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGE 323
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD E+++ VP
Sbjct: 324 VERRIVSQLLTLMDGLK----SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA------ 251
R E+L+++TK + L +VDLE IA +GYVGADL ALC EA + ++ D
Sbjct: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 439
Query: 252 ---NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E ++VT E ++ A PS R VE+P V+WEDIGGL ++K++LQ+ V++
Sbjct: 440 TIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQY 499
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G+SP +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 559
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR +AP ++FFDE D + +RG S + +R+L+ LLTEMDG+ K
Sbjct: 560 EANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKK 619
Query: 429 VII 431
+
Sbjct: 620 TVF 622
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 17/242 (7%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 477 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 589
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D IDPAL R GR D
Sbjct: 590 RGSSVGDAGGAAD-RVLNQLLTEMDGMSAKKT----VFIIGATNRPDIIDPALLRPGRLD 644
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ + +P + R +I K +K P+ NVDL A+A G+ GAD+ +C+ A A++
Sbjct: 645 QLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIR 704
Query: 247 RS 248
+
Sbjct: 705 EN 706
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 191 GEPLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
Query: 333 PGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG KT +A+A A+ A FF ++G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T V R++S LLT MDGL+ +A VI+
Sbjct: 311 DSIAPKR---EKTHGEVERRIVSQLLTLMDGLKSRAHVIV 347
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/423 (43%), Positives = 266/423 (62%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E G
Sbjct: 207 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 266
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E
Sbjct: 267 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTNGE 322
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD E+++ VP
Sbjct: 323 VERRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA------ 251
R E+L+++TK + L +VDLE I+ +GYVGADL ALC EA + ++ D
Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDD 438
Query: 252 ---NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E ++V+ E + A PS R VE+P V+WEDIGGL ++K++LQ+ V++
Sbjct: 439 SIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQY 498
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G+SP +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 499 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 558
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR +AP ++FFDE D + +RG S+ + +R+L+ LLTEMDG+ K
Sbjct: 559 EANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKK 618
Query: 429 VII 431
+
Sbjct: 619 TVF 621
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 125/242 (51%), Gaps = 17/242 (7%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 476 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 588
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D ID AL R GR D
Sbjct: 589 RGNSAGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDSALLRPGRLD 643
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ + +P + R I K +K P+ +VD+ A+A G+ GAD+ +C+ A A++
Sbjct: 644 QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703
Query: 247 RS 248
+
Sbjct: 704 EN 705
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 190 GEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 249
Query: 333 PGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG KT +A+A A+ A FF ++G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 250 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T+ V R++S LLT MDGL+ +A VI+
Sbjct: 310 DSIAPKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIV 346
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/432 (43%), Positives = 269/432 (62%), Gaps = 18/432 (4%)
Query: 10 EHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
E+N + IGG R + +RE++ PL + + +G+K PRG+L+YGPPGTGKT +
Sbjct: 205 ENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLM 264
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
RAV E GA +I+ V GESE LR+AF +A +A P+++FIDEID++
Sbjct: 265 ARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNA----PAIIFIDEIDSIA 320
Query: 130 PRRDHRR-EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAE 188
P+RD E + R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD E
Sbjct: 321 PKRDKTNGEVERRVVSQLLTLMDGMKARS----NVVVIAATNRPNSIDPALRRFGRFDRE 376
Query: 189 VEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
V++ +P A R E+L+++TK + L +VDLEA+A +GYVGAD+ +LC EA M ++
Sbjct: 377 VDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREK 436
Query: 249 SD---------ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
D E L VTM+++R A PS R VE VTW+D+GGL ++K
Sbjct: 437 MDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIK 496
Query: 300 KKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAE 359
++L++ VE+P+ H +++ G+SP +G L +GPPG KT LAKA A A+F S+ G E
Sbjct: 497 EELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPE 556
Query: 360 LYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLT 419
L SM+ GESE+ +R+ F +AR AAP+++F DE D + RGGS + +R+++ LLT
Sbjct: 557 LLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLT 616
Query: 420 EMDGLEQAKVII 431
EMDG+ K +
Sbjct: 617 EMDGMNAKKNVF 628
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 130/245 (53%), Gaps = 17/245 (6%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W + +GG E L+E + +P+L+ Q K GL +G+L YGPPGTGKT L +
Sbjct: 483 NVTW---DDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAK 539
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV E A+ + + GESE +R+ F +A + A P+VVF+DE+D++
Sbjct: 540 AVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAA----PTVVFLDELDSIAKA 595
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD K +V V+ +TNR D IDPA+ R GR D
Sbjct: 596 RGGSLGDAGGASD-RVVNQLLTEMDGMNAKK----NVFVIGATNRPDQIDPAILRPGRLD 650
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ V +P R IL +K PL+ ++L AIA + G+ GADL + + A A+K
Sbjct: 651 QLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710
Query: 247 RSSDA 251
S +A
Sbjct: 711 DSIEA 715
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/424 (43%), Positives = 271/424 (63%), Gaps = 20/424 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E G
Sbjct: 209 DDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETG 268
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF++ ++ P+++FIDEIDA+ P+R+ E
Sbjct: 269 AFFFLINGPEIMSKMSGESESNLRKAFAECEKNS----PAILFIDEIDAIAPKREKAHGE 324
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K + HVVV+A+TNR ++ID ALRR GRFD E+++ +P A
Sbjct: 325 VEKRIVSQLLTLMDGLK----TRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---------- 247
R EIL+++TK + L +VDLE +A C+G+VGADL +LC EA + ++
Sbjct: 381 GRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDD 440
Query: 248 SSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVE 307
+ DA E L+VTME++R A PS R VE P TW DIGGL+++K++LQ+ V+
Sbjct: 441 TIDA-EVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 499
Query: 308 WPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGE 367
+P++H + + G+ P RG L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GE
Sbjct: 500 YPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 559
Query: 368 SEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
SEA +R+ F +AR AAP ++FFDE D + RGGS + +R+++ +LTEMDG+
Sbjct: 560 SEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAK 619
Query: 428 KVII 431
K +
Sbjct: 620 KNVF 623
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 148/307 (48%), Gaps = 38/307 (12%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L+EL+ +P+ + + K G++ RG+L YGPPG GKT L +A+ EC A+
Sbjct: 484 IGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN 543
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-----DHR 135
I + GESE +R+ F +A + A P V+F DE+D++ R D
Sbjct: 544 FISIKGPELLTMWFGESEANVRDVFDKARAAA----PCVLFFDELDSIAKARGGSVGDAG 599
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPT 195
D R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 600 GAAD-RVINQVLTEMDGMNAKK----NVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 654
Query: 196 AEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
R +I K +K PL A++DL +A + G+ GADL +C+ A A++ S +
Sbjct: 655 EASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIER---- 710
Query: 256 GVLSVTMEDWRHARSVVG------------PSITRGVTVEIPK-----VTWEDIGGLRDL 298
+ E R RS G P ITR E K VT DI
Sbjct: 711 ---EIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMF 767
Query: 299 KKKLQQA 305
+ LQQ+
Sbjct: 768 AQTLQQS 774
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++D+GG+R ++++ VE P++H F +G+ P RG LL GPPG KT +A+A A
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA 264
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F +P+I+F DE D + KR +
Sbjct: 265 NETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHG- 323
Query: 406 SITVGERLLSTLLTEMDGLE-QAKVII 431
V +R++S LLT MDGL+ +A V++
Sbjct: 324 --EVEKRIVSQLLTLMDGLKTRAHVVV 348
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 266/423 (62%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E G
Sbjct: 208 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 267
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E
Sbjct: 268 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGE 323
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD E+++ VP
Sbjct: 324 VERRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 379
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA------ 251
R E+L+++TK + L +VDLE ++ +GYVGADL ALC EA + ++ D
Sbjct: 380 GRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDE 439
Query: 252 ---NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E ++V+ + ++ A PS R VE+P V+WEDIGGL ++K++LQ+ V++
Sbjct: 440 EIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQY 499
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G+SP +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 559
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR +AP ++FFDE D + +RG S + +R+L+ LLTEMDG+ K
Sbjct: 560 EANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKK 619
Query: 429 VII 431
+
Sbjct: 620 TVF 622
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 17/242 (7%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +
Sbjct: 477 NVSW---EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ I + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 589
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D IDPAL R GR D
Sbjct: 590 RGNSVGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDPALLRPGRLD 644
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ + +P E R++I K +K P+ +VDL A+A G+ GAD+ +C+ + A++
Sbjct: 645 QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704
Query: 247 RS 248
+
Sbjct: 705 EN 706
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G I R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 191 GEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
Query: 333 PGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG KT +A+A A+ A FF ++G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T V R++S LLT MDGL+ +A VI+
Sbjct: 311 DSIAPKR---EKTHGEVERRIVSQLLTLMDGLKSRAHVIV 347
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/423 (43%), Positives = 264/423 (62%), Gaps = 18/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E G
Sbjct: 208 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 267
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E
Sbjct: 268 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGE 323
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD E+++ VP
Sbjct: 324 VERRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA------ 251
R E+L ++TK + L VDLE I+ +GYVGADL ALC EA + ++ D
Sbjct: 380 GRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDD 439
Query: 252 ---NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E ++VT E ++ A PS R VE+P V+WEDIGGL ++K++LQ+ V++
Sbjct: 440 TIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQY 499
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++ F + G+SP +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 500 PVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 559
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
EA +R F +AR +AP ++FFDE D + +RG SS + +R+L+ LLTEMDG+ K
Sbjct: 560 EANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKK 619
Query: 429 VII 431
+
Sbjct: 620 TVF 622
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 126/242 (52%), Gaps = 17/242 (7%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W E IGG L+E + +P+ + +K G+ +G+L YGPPG GKT L +
Sbjct: 477 NVSW---EDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +RE F +A A P V+F DE+D++ +
Sbjct: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQ 589
Query: 132 R-----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
R D D R+ +QL T MD KT V ++ +TNR D IDPAL R GR D
Sbjct: 590 RGSSSGDAGGAAD-RVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDPALLRPGRLD 644
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ + +P + R +I K +K PL ++DL A+A G+ GAD+ +C+ A A++
Sbjct: 645 QLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIR 704
Query: 247 RS 248
+
Sbjct: 705 EN 706
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + +V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 191 GEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
Query: 333 PGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG KT +A+A A+ A FF ++G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T V R++S LLT MDGL+ +A VI+
Sbjct: 311 DSIAPKR---EKTHGEVERRIVSQLLTLMDGLKSRAHVIV 347
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 356 bits (913), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 267/424 (62%), Gaps = 21/424 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG RA + +REL+ PL +S K+G+K P+G+LLYGPPGTGKT + RA+ E G
Sbjct: 208 DDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANETG 267
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A L +I+ + GESE LR+AF +A ++ P+++FIDEIDAL P+R+ + E
Sbjct: 268 AFLFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDALAPKREKSQGE 323
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K +V+V+ +TNR ++IDPALRR GRFD E+E+ VP
Sbjct: 324 VERRIVSQLLTLMDGMKARS----NVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDET 379
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS--------- 248
R EIL+++TK + + +VDL AI +G+ G+DL +LC EA + ++
Sbjct: 380 GRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSE 439
Query: 249 -SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVE 307
DA A L V E++R+A PS R ++ P V W DIGGL +K++L++ V+
Sbjct: 440 KIDAKVLAS-LKVNSENFRYAIEHTDPSSLRETVIQSPNVKWSDIGGLEQVKQELRETVQ 498
Query: 308 WPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGE 367
+P+++ F + G++P +G L +GPPGC KT LAKA A +A+F S+ G EL SM+VGE
Sbjct: 499 YPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGE 558
Query: 368 SEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
SE+ +R+ F RAR AAP ++FFDE D + R G+ +S +R+L+ LL+EMDG+ Q
Sbjct: 559 SESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSS-GATDRMLNQLLSEMDGINQK 617
Query: 428 KVII 431
K +
Sbjct: 618 KNVF 621
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 14/245 (5%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
++ N KW IGG + LRE + +P+ Y + K G+ +G+L YGPPG GK
Sbjct: 472 VIQSPNVKWSD---IGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGK 528
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T L +AV EC A+ I + VGESE +R+ F++A A P V+F DEID
Sbjct: 529 TLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAA----PCVLFFDEID 584
Query: 127 ALCPRR---DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
++ R D R+ +QL + MD K +V V+ +TNR D +D AL R G
Sbjct: 585 SIAKARSGNDGSSGATDRMLNQLLSEMDGINQKK----NVFVIGATNRPDQLDSALMRPG 640
Query: 184 RFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMS 243
R D V + +P + R IL+ KK PL +DL +A + + + GADL +C+ A
Sbjct: 641 RLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKL 700
Query: 244 AVKRS 248
A++ +
Sbjct: 701 AIRET 705
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Query: 280 VTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTT 339
V E V ++D+GG R K+++ VE P++HS +S++G+ P +G LL+GPPG KT
Sbjct: 198 VEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTL 257
Query: 340 LAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKR 399
+A+A A+ A F ++G E+ S GESE+ LR F+ A +P+IIF DE D + KR
Sbjct: 258 IARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKR 317
Query: 400 GGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
S V R++S LLT MDG++ ++ VI+
Sbjct: 318 EKSQG---EVERRIVSQLLTLMDGMKARSNVIV 347
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 356 bits (913), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/418 (43%), Positives = 267/418 (63%), Gaps = 22/418 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IG A + +RE++ +P+ + Q+LG+ P+G+LLYGPPGTGKT L RA+ E G
Sbjct: 212 EDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIG 271
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
A+ ++ + GESE+ +RE F +A +A PS++FIDEIDA+ P+R D E
Sbjct: 272 AYFITVNGPEIMSKFYGESEQRIREIFKEAEENA----PSIIFIDEIDAIAPKREDVTGE 327
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ +QL TLMD K V+V+ +TNR DAIDPALRR GRFD E+E+ P +
Sbjct: 328 VEKRVVAQLLTLMDGIKGRG----RVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDAN----- 252
R +IL+++T+ +P+ +VDL+ +A GY GADL AL +EA + A++R D
Sbjct: 384 GRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLD 443
Query: 253 ------ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAV 306
E L V+M D+ +A + PS+ R V VE+PKV W DIGGL ++K++L++AV
Sbjct: 444 QPTIPAEIIKELKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAV 503
Query: 307 EWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVG 366
EWP++ F++ G++P +G LL GPPG KT LAKA A + A+F ++ G E+ S +VG
Sbjct: 504 EWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVG 563
Query: 367 ESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
ESE +R F++AR AAP++IFFDE D + RG S+ + +T ER+++ LL EMDG+
Sbjct: 564 ESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVT--ERIVNQLLAEMDGI 619
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 158/285 (55%), Gaps = 36/285 (12%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + LRE + +PL + K G+ P+G+LL+GPPGTGKT L +AV E GA+
Sbjct: 489 IGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGAN 548
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + VGESEKA+RE F +A A P+V+F DEID++ P R + V
Sbjct: 549 FIAVRGPEILSKWVGESEKAIREIFRKARQAA----PTVIFFDEIDSIAPIRGLSTDSGV 604
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEE 198
RI +QL MD P + VV++A+TNR D +DPAL R GRFD + V P
Sbjct: 605 TERIVNQLLAEMDGIVP----LNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTA 660
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV--------KRSSD 250
RFEILK++TK VPL +V LE IA GY GADLEAL REAT++A+ K+S D
Sbjct: 661 RFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIYSMCDKQSRD 720
Query: 251 ANECAGVL----------------SVTMEDWRHARSVVGPSITRG 279
EC G + V+ ED+ A +VV S+T+
Sbjct: 721 --ECKGNMECYQKHIKECMNKTSFKVSKEDFEKALNVVKASLTQA 763
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 4/148 (2%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAA 344
PKV+WEDIG L + K+K+++ VEWP++H F RLGI P +G LL+GPPG KT LA+A
Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARAL 266
Query: 345 AHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
A+ A F +++G E+ S + GESE +R F+ A APSIIF DE D + KR
Sbjct: 267 ANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR---ED 323
Query: 405 TSITVGERLLSTLLTEMDGLE-QAKVII 431
+ V +R+++ LLT MDG++ + +VI+
Sbjct: 324 VTGEVEKRVVAQLLTLMDGIKGRGRVIV 351
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 355 bits (910), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 264/424 (62%), Gaps = 19/424 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + +REL+ PL + + +G+K P+G+LLYGPPG+GKT + RAV E G
Sbjct: 207 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 266
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A I+ + GESE LR+AF +A +A PS++FIDEID++ P+R+ E
Sbjct: 267 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTNGE 322
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K S HV+V+ +TNR ++IDPALRR GRFD E+++ VP
Sbjct: 323 VERRIVSQLLTLMDGLK----SRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA------ 251
R E+L+++TK + L +VDLE I+ +GYVGADL ALC EA + ++ D
Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDD 438
Query: 252 ---NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E ++VT E + A PS R VE+P V+W DIGGL ++K++LQ+ V++
Sbjct: 439 SIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQY 498
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H F + G+SP +G L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 499 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 558
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKR-GGSSSTSITVGERLLSTLLTEMDGLEQA 427
EA +R F +AR +AP ++FFDE D + +R GGS +R+L+ LLTEMDG+
Sbjct: 559 EANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAK 618
Query: 428 KVII 431
K +
Sbjct: 619 KTVF 622
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 13/233 (5%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG L+E + +P+ + + +K G+ +G+L YGPPG GKT L +A+ EC A+
Sbjct: 482 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 541
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +RE F +A A P V+F DE+D++ +R D
Sbjct: 542 FISVKGPELLTMWFGESEANVREIFDKARQSA----PCVLFFDELDSIATQRGGGSGGDG 597
Query: 141 -----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPT 195
R+ +QL T MD KT V ++ +TNR D ID AL R GR D + + +P
Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKT----VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 653
Query: 196 AEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ R I K +K P+ +VD+ A+A G+ GAD+ +C+ A A++ +
Sbjct: 654 EDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN 706
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 273 GPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGP 332
G + R + V ++D+GG+R ++++ VE P++H F +G+ P +G LL+GP
Sbjct: 190 GEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 249
Query: 333 PGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEA 392
PG KT +A+A A+ A FF ++G E+ S GESE+ LR F+ A APSIIF DE
Sbjct: 250 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 309
Query: 393 DVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE-QAKVII 431
D + KR T+ V R++S LLT MDGL+ +A VI+
Sbjct: 310 DSIAPKR---EKTNGEVERRIVSQLLTLMDGLKSRAHVIV 346
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 272/423 (64%), Gaps = 20/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG ++ +RE++ P+ + QKLG++ P+G+LL+GPPGTGKT L +AV E
Sbjct: 189 EDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETS 248
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRRE 137
A I+ + + GESE+ LRE F A + PS++FIDE+D++ P+R D E
Sbjct: 249 ASFFSIAGPEIISKYYGESEQQLREIFEDAKDDS----PSIIFIDELDSIAPKREDVTGE 304
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ +QL T+MD + V+V+A+TNRVDA+DPALRR GRFD E+E+ VP
Sbjct: 305 VERRVVAQLLTMMDGLEGRG----QVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEI 360
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---SSDANE- 253
R EILK++T+ +PL +V+L +A +G+VGAD+E+L +EA M A++R D +E
Sbjct: 361 GREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEE 420
Query: 254 -----CAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
+ V ED++ A S V PS R V VE+PK+TW+D+GGL + K ++++VEW
Sbjct: 421 DIPPSLIDRMIVKREDFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEW 480
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P+ F+R+G+ P G LL+GPPG KT +AKA A+ A+F S+ G +L S +VGES
Sbjct: 481 PLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES 540
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
E +R TF++AR AP++IFFDE D + RG + +++ ER+++ LLTE+DGLE+ +
Sbjct: 541 EKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVS--ERVVNQLLTELDGLEEME 598
Query: 429 VII 431
++
Sbjct: 599 EVM 601
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 153/261 (58%), Gaps = 16/261 (6%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG A ++E + +PL + ++G++ P G+LLYGPPGTGKT + +AV E
Sbjct: 462 DDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETN 521
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
A+ + + VGESEKA+R+ F +A A P+V+F DE+D+L P R
Sbjct: 522 ANFISVRGPQLLSKWVGESEKAIRQTFRKARQVA----PTVIFFDELDSLAPGRGQTGGN 577
Query: 139 DV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTA 196
+V R+ +QL T +D + + V+V+A+TNR D IDPAL RSGRFD V+V P
Sbjct: 578 NVSERVVNQLLTELDGLE----EMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGI 633
Query: 197 EERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAG 256
E R +ILK++T+ PL A+V L +A +GYVG+DL + REA + A++ DA++
Sbjct: 634 EGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDDEDADD--- 690
Query: 257 VLSVTMEDWRHARSVVGPSIT 277
V M +R A V P+IT
Sbjct: 691 ---VGMAHFRAAMENVRPTIT 708
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
+T+EDIGGL + +++++ VE P+KH F +LGI P +G LLHGPPG KT LAKA A+
Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245
Query: 347 AAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
ASFFS++G E+ S Y GESE LR F+ A+ +PSIIF DE D + KR +
Sbjct: 246 ETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR---EDVT 302
Query: 407 ITVGERLLSTLLTEMDGLE-QAKVII 431
V R+++ LLT MDGLE + +VI+
Sbjct: 303 GEVERRVVAQLLTMMDGLEGRGQVIV 328
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 352 bits (903), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 266/421 (63%), Gaps = 24/421 (5%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG + +RE+I PL + ++LG+ P+G++LYGPPGTGKT + RAV E G
Sbjct: 190 EDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESG 249
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RRE 137
A+ I+ + + G+SE+ LRE FS+A A PS++FIDEID++ P+R+ + E
Sbjct: 250 ANFLSINGPEIMSKYYGQSEQKLREIFSKAEETA----PSIIFIDEIDSIAPKREEVQGE 305
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ +QL TLMD K HV+V+ +TNR+DAIDPALRR GRFD E+E+ VP
Sbjct: 306 VERRVVAQLLTLMDGMKERG----HVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRN 361
Query: 198 ERFEILKLYTKKVPL-----DANVDLEAIATSCNGYVGADLEALCREATMSAVKR----- 247
R EIL ++T+ +PL + N LE +A G+VGADL AL RE+ M+A++R
Sbjct: 362 GRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEI 421
Query: 248 ---SSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQ 304
E + VT +D+++A + PS R V VE+P V W+DIGGL D+K+++++
Sbjct: 422 DLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKE 481
Query: 305 AVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMY 364
VE P+ F RLGI P +G LL+GPPG KT LAKA A + A+F S+ G E+ S +
Sbjct: 482 TVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKW 541
Query: 365 VGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
VGESE +R F++A+ AP+I+F DE D + +RG +S + +T ER+++ LLT +DG+
Sbjct: 542 VGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVT--ERIVNQLLTSLDGI 599
Query: 425 E 425
E
Sbjct: 600 E 600
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 19/271 (7%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W + IGG ++E + PLL ++LG++ +G LLYGPPG GKT L +
Sbjct: 463 NVHW---DDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAK 519
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
AV E A+ I V VGESEKA+RE F +A A P++VF+DEID++ PR
Sbjct: 520 AVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVA----PAIVFLDEIDSIAPR 575
Query: 132 RDHRREQDV--RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEV 189
R + V RI +QL T +D + + VVV+ +TNR D +DPAL R+GRFD +
Sbjct: 576 RGTTSDSGVTERIVNQLLTSLDGIE----VMNGVVVIGATNRPDIMDPALLRAGRFDKLI 631
Query: 190 EVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSS 249
+ P E R ILK++TK +PL +VDL IA GYVGADLE LCREA M+A + +
Sbjct: 632 YIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENP 691
Query: 250 DANECAGVLSVTMEDWRHARSVVGPSITRGV 280
DA SV+ +++ A + PS+ V
Sbjct: 692 DAT------SVSQKNFLDALKTIRPSVDEEV 716
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 97/150 (64%), Gaps = 4/150 (2%)
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAK 342
E+ ++++EDIGGL + K+++ +E P+KH F RLGI+P +G +L+GPPG KT +A+
Sbjct: 183 EVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIAR 242
Query: 343 AAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
A A+ + A+F S++G E+ S Y G+SE LR F +A APSIIF DE D + KR
Sbjct: 243 AVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR--- 299
Query: 403 SSTSITVGERLLSTLLTEMDGL-EQAKVII 431
V R+++ LLT MDG+ E+ VI+
Sbjct: 300 EEVQGEVERRVVAQLLTLMDGMKERGHVIV 329
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 265/423 (62%), Gaps = 19/423 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ IGG R + +REL+ PL + + +G+K PRG+L+YGPPGTGKT + RAV E G
Sbjct: 224 DDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETG 283
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
A +I+ + GESE LR+AF +A ++ P+++FIDEID++ P+R+ E
Sbjct: 284 AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNS----PAIIFIDEIDSIAPKREKTNGE 339
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ SQL TLMD K +VVV+A+TNR ++IDPALRR GRFD EV+V +P
Sbjct: 340 VERRVVSQLLTLMDGMKARS----NVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA------ 251
R EIL+++TK + L +VDLE IA +GYVG+DL +LC EA M ++ D
Sbjct: 396 GRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDED 455
Query: 252 ---NECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L VTM+++R A PS R VE+P V WEDIGGL ++K++L++ V+
Sbjct: 456 EIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQM 515
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P+ ++ F R G++P +G L GPPG KT LAKA A+ A+F S+ G EL SM+ GES
Sbjct: 516 PVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGES 575
Query: 369 EALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAK 428
E+ +R+ F +AR AAP ++F DE D + AK G+S+ G+R+++ LLTEMDG+ K
Sbjct: 576 ESNVRDIFDKARAAAPCVVFLDELDSI-AKARGASAGDSGGGDRVVNQLLTEMDGVNSKK 634
Query: 429 VII 431
+
Sbjct: 635 NVF 637
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 14/240 (5%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N +W E IGG LRE + P++Y+ + + G+ +G+L +GPPGTGKT L +
Sbjct: 493 NVRW---EDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAK 549
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + GESE +R+ F +A + A P VVF+DE+D++
Sbjct: 550 AIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAA----PCVVFLDELDSIAKA 605
Query: 132 RDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAE 188
R R+ +QL T MD K +V V+ +TNR D IDPAL R GR D
Sbjct: 606 RGASAGDSGGGDRVVNQLLTEMDGVNSKK----NVFVIGATNRPDQIDPALMRPGRLDQL 661
Query: 189 VEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
+ V +P E RF IL+ + P+ +VDL A+A + +G+ GADLE + + A A+K S
Sbjct: 662 IYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS 721
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 286 KVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAA 345
+V ++DIGG R ++++ VE P++H F +GI P RG L++GPPG KT +A+A A
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 279
Query: 346 HAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSST 405
+ A FF ++G E+ S GESE+ LR F+ A +P+IIF DE D + KR T
Sbjct: 280 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKT 336
Query: 406 SITVGERLLSTLLTEMDGLE 425
+ V R++S LLT MDG++
Sbjct: 337 NGEVERRVVSQLLTLMDGMK 356
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/424 (42%), Positives = 268/424 (63%), Gaps = 19/424 (4%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+ +GG R + ++E++ PL + + +G+K PRG+LL+GPPGTGKT + RAV E G
Sbjct: 210 DDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETG 269
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRR-E 137
+ +I+ V GESE LR+AF + + +P+++FIDEIDA+ P+R+ E
Sbjct: 270 SFFFLINGPEVMSKMSGESESNLRKAFEECEKN----QPAILFIDEIDAIAPKREKTNGE 325
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ RI SQL TLMD K ++VV+A+TNR ++ID ALRR GRFD E+++ +P A
Sbjct: 326 VERRIVSQLLTLMDGVKGRS----NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 381
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSD------- 250
R EIL+++TK + L +VDLE IA C+G+VGADL +LC EA + ++ +
Sbjct: 382 GRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDD 441
Query: 251 --ANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEW 308
E L+VTME++R A+ PS R VE P TW DIGGL+++K++LQ+ V++
Sbjct: 442 QIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQY 501
Query: 309 PIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGES 368
P++H + + G+ P RG L +GPPGC KT LAKA A+ +A+F S+ G EL +M+ GES
Sbjct: 502 PVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 561
Query: 369 EALLRNTFQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
EA +R+ F +AR AAP ++FFDE D + A+ GG+ +R+++ +LTEMDG+
Sbjct: 562 EANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAK 621
Query: 428 KVII 431
K +
Sbjct: 622 KNVF 625
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 140/274 (51%), Gaps = 21/274 (7%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L+EL+ +P+ + + K G++ RG+L YGPPG GKT L +A+ EC A+
Sbjct: 485 IGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN 544
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
I + GESE +R+ F +A + A P V+F DE+D++ R D
Sbjct: 545 FISIKGPELLTMWFGESEANVRDVFDKARAAA----PCVLFFDELDSIAKARGGGAGGDG 600
Query: 141 -----RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPT 195
R+ +Q+ T MD K +V ++ +TNR D IDPA+ R GR D + + +P
Sbjct: 601 GGASDRVINQVLTEMDGMNAKK----NVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 656
Query: 196 AEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
R +ILK +K PL ++DL +A + G+ GADL +C+ A A++ S +
Sbjct: 657 EASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEK---- 712
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVTVE-IPKVT 288
+ +E R R G + V+ +P++T
Sbjct: 713 ---EIRIEKERQDRQARGEELMEDDAVDPVPEIT 743
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
+ ++D+GG+R ++++ VE P++H F +GI P RG LL GPPG KT +A+A A+
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVAN 266
Query: 347 AAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ FF ++G E+ S GESE+ LR F+ P+I+F DE D + KR T+
Sbjct: 267 ETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR---EKTN 323
Query: 407 ITVGERLLSTLLTEMDGLE 425
V R++S LLT MDG++
Sbjct: 324 GEVERRIVSQLLTLMDGVK 342
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/436 (42%), Positives = 274/436 (62%), Gaps = 24/436 (5%)
Query: 9 SEHNEKWKAEE-----AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPG 63
++ N K+ E A+GG +E+L+ I PL + G+ PRG+LL+GPPG
Sbjct: 230 TQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPG 289
Query: 64 TGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFID 123
TGKT L+R V AH+ I+ S+ ++GE+E ALR+ F++A + +PS++FID
Sbjct: 290 TGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKY----QPSIIFID 345
Query: 124 EIDALCPRR--DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRR 181
EID++ P R D E + R+ + L TLMD + VVV+A+TNR +++DPALRR
Sbjct: 346 EIDSIAPNRANDDSGEVESRVVATLLTLMDG----MGAAGKVVVIAATNRPNSVDPALRR 401
Query: 182 SGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANV-DLEAI---ATSCNGYVGADLEALC 237
GRFD EVE+ +P + RF+IL ++ D +V D EAI A+ +GYVGADL ALC
Sbjct: 402 PGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALC 461
Query: 238 REATMSAVKRS--SDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGL 295
RE+ M ++R +DAN L VT++D A + PS R + +E+PKV W DIGG
Sbjct: 462 RESVMKTIQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQ 521
Query: 296 RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSL 355
+LK K+++ ++ P++ S F+RLGIS +G LL+GPPGCSKT AKA A + +F ++
Sbjct: 522 EELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAV 581
Query: 356 SGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLS 415
G E+++ YVGESE +R F++AR AAPSIIFFDE D + R GSS+++ +L+
Sbjct: 582 KGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA---ANHVLT 638
Query: 416 TLLTEMDGLEQAKVII 431
+LL E+DG+E+ K ++
Sbjct: 639 SLLNEIDGVEELKGVV 654
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 136/265 (51%), Gaps = 18/265 (6%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG ++E+I PL S +LG+ P+G+LLYGPPG KT +A+ E G +
Sbjct: 518 IGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGIN 577
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + +VGESE+A+RE F +A S A PS++F DEIDAL P RD
Sbjct: 578 FLAVKGPEIFNKYVGESERAIREIFRKARSAA----PSIIFFDEIDALSPDRDG---SST 630
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERF 200
A+ + T + + + VV+VA+TNR D ID AL R GR D + V P R
Sbjct: 631 SAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARL 690
Query: 201 EILKLYTKKVPL-DANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
EILK TKK ++ VDL +A GY GA++ LC+EA ++A+ L
Sbjct: 691 EILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMED---------LD 741
Query: 260 VTMEDWRHARSVVGPSITRGVTVEI 284
V + RH I RG+T E+
Sbjct: 742 VAKVELRHFEKAF-KGIARGITPEM 765
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 328 bits (840), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 258/418 (61%), Gaps = 19/418 (4%)
Query: 20 AIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGA 79
+IGG +A + +R+++ P + + PRG+LLYGPPGTGKT ++RAV E A
Sbjct: 280 SIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANA 339
Query: 80 HLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRR-DHRREQ 138
+ I SV ++GE+E LR+ F A +H +PS++FIDEIDAL P+R + E
Sbjct: 340 QVFTIDGPSVVGKYLGETESRLRKIFEDARAH----QPSIIFIDEIDALAPKRTEDVSEA 395
Query: 139 DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEE 198
+ R + L TL+D + VVV+A+TNR ++ID ALRR GR + E+E+ +P
Sbjct: 396 ESRAVATLLTLLDG----MANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSA 451
Query: 199 RFEILKLYTKKVPLDAN-VDLEAIATSCNGYVGADLEALCREATMSAVKRS-SDANECAG 256
R +I+KL VP + N LE +A+ + YVGADL A+ REA + A+KR+ S + +G
Sbjct: 452 RLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSG 511
Query: 257 VL---SVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ +V M+D A S V S R +E P V W DIGG ++K+KL+++VEWP+ H
Sbjct: 512 LDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHG 571
Query: 314 TAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLR 373
FSRLG+ P +G LL+GPPGCSKT AKA A +F ++ G EL+ +VGESE +R
Sbjct: 572 ETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVR 631
Query: 374 NTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
FQ+AR A+PS+IFFDE D + A RG +S+ +R+++ LL E+DG+E + ++
Sbjct: 632 QVFQKARQASPSVIFFDEIDALTANRGEDNSS-----DRVVAALLNELDGIEALRNVL 684
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 134/248 (54%), Gaps = 12/248 (4%)
Query: 7 IMSEHNEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGK 66
+M N W IGG + L+E + +PL + +LG++ P+G+LLYGPPG K
Sbjct: 539 MMESPNVHWSD---IGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSK 595
Query: 67 TSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEID 126
T +A+ E G + + + VGESE+A+R+ F +A PSV+F DEID
Sbjct: 596 TITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQ----ASPSVIFFDEID 651
Query: 127 ALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFD 186
AL R D R+ + L +D + ++ +V+V+A+TNR D IDPAL R GR D
Sbjct: 652 ALTANRGEDNSSD-RVVAALLNELDGIE----ALRNVLVLAATNRPDMIDPALMRPGRLD 706
Query: 187 AEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
+ V P E R +I+K+ +K+ +VDL+ IA G GA++ ALC+EA + A+
Sbjct: 707 RLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMH 766
Query: 247 RSSDANEC 254
+A E
Sbjct: 767 EDLEAKEI 774
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 4/180 (2%)
Query: 253 ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKH 312
E +L + ED + G T+ VT+ IGGL+ +++ VE P ++
Sbjct: 242 ETPDLLKLPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQN 301
Query: 313 STAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALL 372
F I P RG LL+GPPG KT + +A A A A F++ G + Y+GE+E+ L
Sbjct: 302 PELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRL 361
Query: 373 RNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA-KVII 431
R F+ AR PSIIF DE D + KR S + + R ++TLLT +DG+ A KV++
Sbjct: 362 RKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES---RAVATLLTLLDGMANAGKVVV 418
>sp|Q9BVQ7|SPA5L_HUMAN Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens
GN=SPATA5L1 PE=1 SV=2
Length = 753
Score = 328 bits (840), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 188/412 (45%), Positives = 265/412 (64%), Gaps = 14/412 (3%)
Query: 16 KAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVR 75
+ E +GG A ++LREL+ PL Y LGL PRG+LL GPPG GKT LVRAV R
Sbjct: 197 QPEVPLGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAR 256
Query: 76 ECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR 135
E GA L +S ++ + GE+E+ +R F +A A G PS++F+DE+DALCP+R R
Sbjct: 257 EAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASRG-PSLLFLDEMDALCPQRGSR 315
Query: 136 REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPT 195
+ R+ +Q+ TL+D + VVVV +TNR DA+DPALRR GRFD EV + PT
Sbjct: 316 APES-RVVAQVLTLLDGASGDR----EVVVVGATNRPDALDPALRRPGRFDREVVIGTPT 370
Query: 196 AEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECA 255
++R EIL++ T K+P+ ++VDL +A GYVGADL ALCREA M A+ S +
Sbjct: 371 LKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHSEKNQDNP 430
Query: 256 GVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHS 313
+ + D+ A + PS R V ++I V WE+IGGL D+K KL+Q++EWP+K
Sbjct: 431 VIDEI---DFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFP 487
Query: 314 TAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLR 373
F R+G++ +G LL+GPPGC+KTTL +A A + SF S+SGA+L+S +VG+SE +L
Sbjct: 488 WEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 547
Query: 374 NTFQRARLAAPSIIFFDEAD-VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
F++AR + P+I+F DE D ++GA+ +S T V ER+LS LL E+DG+
Sbjct: 548 QIFRQARASTPAILFLDEIDSILGAR--SASKTGCDVQERVLSVLLNELDGV 597
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 143/278 (51%), Gaps = 29/278 (10%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 464 EEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCH 523
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA-LCPRRDHRRE 137
+S + VG+SEK L + F QA + P+++F+DEID+ L R +
Sbjct: 524 CSFVSVSGADLFSPFVGDSEKVLSQIFRQARAST----PAILFLDEIDSILGARSASKTG 579
Query: 138 QDV--RIASQLFTLMDS-------NKPSKTSVPH--------VVVVASTNRVDAIDPALR 180
DV R+ S L +D + SK+S V+++A+TNR D +D AL
Sbjct: 580 CDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALL 639
Query: 181 RSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREA 240
R GR D + + P + R ILK+ TK +P+ +V LE +A + GADL LC EA
Sbjct: 640 RPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEA 699
Query: 241 TMSAVKRSS-DANECAGVLSVTMEDWRHARSVVGPSIT 277
+ A++ + DA +V E + + V PS++
Sbjct: 700 ALLALQENGLDAT------TVKQEHFLKSLKTVKPSLS 731
>sp|A7YSY2|SPA5L_BOVIN Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus
GN=SPATA5L1 PE=2 SV=1
Length = 767
Score = 324 bits (831), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 185/407 (45%), Positives = 254/407 (62%), Gaps = 12/407 (2%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG A ++LREL+ PL Y LGL+ PRG+LL GPPG GKT LVRAV RE GA
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QD 139
L +S ++ A GE+E+ +R F +A A S +P+++F+DE+DALCPRR + +
Sbjct: 262 LLAVSAPALQGARPGETEENVRRIFKRARELA-SRRPTLLFLDEVDALCPRRGGPHQAPE 320
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEER 199
R+ +Q+ TL+D + VVVV STNR DA+DPALRR GRFD EV + PT +R
Sbjct: 321 SRVVAQVLTLLDGIGEDR----EVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQR 376
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLS 259
IL++ T K+P+ VDL +A GYVGADL ALCREA M A+ S + +
Sbjct: 377 KAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNP---T 433
Query: 260 VTMEDWRHARSVVGPSITRGV--TVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
+ D+ A + PS R V +I V WE IGGL D+K KL+Q++EWP+K F
Sbjct: 434 IDETDFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFV 493
Query: 318 RLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQ 377
R+G++ +G LL+GPPGC+KTTL +A A + SF S+SGA+L+S +VG+SE +L F+
Sbjct: 494 RMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFR 553
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+AR P+I+F DE D + R S T V +R+LS LL E+DG+
Sbjct: 554 QARANTPAIVFLDEIDSILGSR-SISRTECNVQDRVLSVLLNELDGV 599
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 144/289 (49%), Gaps = 39/289 (13%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG L++ I +PL + + ++GL P+G+LLYGPPG KT+LVRA+ C
Sbjct: 466 EQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCR 525
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+S + VG+SEK L + F QA ++ P++VF+DEID++ R R E
Sbjct: 526 CSFVSVSGADLFSPFVGDSEKILSQVFRQARANT----PAIVFLDEIDSILGSRSISRTE 581
Query: 138 QDV--RIASQLFTLMDS-------NKPSKTSV--------------------PHVVVVAS 168
+V R+ S L +D + SK+ +V+VVA+
Sbjct: 582 CNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAA 641
Query: 169 TNRVDAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGY 228
TNR D +D AL R GR D + + P + R ILK+ TK P+ +V LE +A +
Sbjct: 642 TNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFF 701
Query: 229 VGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSIT 277
GADL LC+EA + A++ + V +V E + + V PS++
Sbjct: 702 SGADLGNLCKEAALLALQENG-----LEVTTVKQEHFLESLKTVKPSLS 745
>sp|Q0VA52|SPA5L_XENTR Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus
tropicalis GN=spata5l1 PE=2 SV=1
Length = 593
Score = 311 bits (798), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 174/373 (46%), Positives = 235/373 (63%), Gaps = 15/373 (4%)
Query: 14 KWKAEEAIGGNRAAVE----ALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSL 69
K K +EA AA++ +L+E+I PL Y KLGL P+G+LL GPPG GKT L
Sbjct: 182 KHKLQEAPQLKVAAMDDTCASLKEIIHMPLHYPETMHKLGLPCPKGVLLIGPPGVGKTLL 241
Query: 70 VRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALC 129
V+AV RE GA++ +S ++H + GESE+ LR+ F +A A SG P+++FIDE+DALC
Sbjct: 242 VKAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKAREAACSG-PALLFIDEVDALC 300
Query: 130 PRRDHRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAE 188
P+R H + R+ +QL TLMD +V VA+T+R DAIDPALRR GRFD E
Sbjct: 301 PKRGHSNSAPENRVVAQLLTLMDGIDSDN----KMVTVAATSRPDAIDPALRRPGRFDRE 356
Query: 189 VEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
V + PT ++R IL++ +P D +VD A+A GYVGADL ALCR+A M AV ++
Sbjct: 357 VIIGTPTHKQRQAILEMMISNMPTDRDVDAAALADVTVGYVGADLTALCRDAAMQAVLQA 416
Query: 249 SDANECAGVLSVTMEDWRHARSVVGPSITRGVT--VEIPKVTWEDIGGLRDLKKKLQQAV 306
S + C V+ + A + PS R VE V WE IGGL D+K KL+Q++
Sbjct: 417 SLDSLCN---LVSRAHFYEAFKRIRPSSARSSIGRVEFKPVHWEHIGGLEDIKHKLRQSI 473
Query: 307 EWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVG 366
EWP+K+ AFSR+G++P +G LL+GPPGC+KTTL KA A + SFFS+S A+L+S YVG
Sbjct: 474 EWPMKYPEAFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCHCSFFSISAADLFSPYVG 533
Query: 367 ESEALLRNTFQRA 379
+SE L R
Sbjct: 534 DSEKTLAQVSNRC 546
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
Query: 292 IGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEAS 351
+ + D L++ + P+ + +LG+ +G LL GPPG KT L KA A A
Sbjct: 193 VAAMDDTCASLKEIIHMPLHYPETMHKLGLPCPKGVLLIGPPGVGKTLLVKAVAREVGAY 252
Query: 352 FFSLSGAELYSMYVGESEALLRNTFQRARLAA---PSIIFFDEADVVGAKRGGSSSTSIT 408
LSG ++ GESE LR F++AR AA P+++F DE D + KRG S+S
Sbjct: 253 VIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNSAP-- 310
Query: 409 VGERLLSTLLTEMDGLE 425
R+++ LLT MDG++
Sbjct: 311 -ENRVVAQLLTLMDGID 326
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E IGG LR+ I +P+ Y ++GL P+G+LLYGPPG KT+LV+AV C
Sbjct: 457 EHIGGLEDIKHKLRQSIEWPMKYPEAFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCH 516
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASS-HALSGKPSVVFIDEIDALCPRRDHRRE 137
IS + +VG+SEK L + ++ S L+ +P + + P D + E
Sbjct: 517 CSFFSISAADLFSPYVGDSEKTLAQVSNRCSDKRGLALQPLFSLMKLMPWWGP--DQKVE 574
Query: 138 QDV--RIASQLFTLM 150
QD+ R S LF+LM
Sbjct: 575 QDLGSRKGSFLFSLM 589
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 288 bits (737), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 173/455 (38%), Positives = 246/455 (54%), Gaps = 58/455 (12%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG + L EL+ P+ + Q G+ PRG+LL+GPPG GKT L A+ E G
Sbjct: 176 IGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVP 235
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RREQD 139
IS S+ GESEK +RE F +A S A P ++FIDEIDA+ P+R+ +RE +
Sbjct: 236 FISISAPSIVSGMSGESEKKVREVFEEAKSLA----PCLMFIDEIDAVTPKRESAQREME 291
Query: 140 VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEER 199
RI +Q T MD KT V+V+ +TNR D++D ALRR+GRFD E+ +TVP+ + R
Sbjct: 292 RRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAR 351
Query: 200 FEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR------------ 247
+IL+ K + L + D +A GYVGADL+AL A + A+KR
Sbjct: 352 EKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLD 411
Query: 248 --------------SSDANECAGV------------------------LSVTMEDWRHAR 269
+ D+N+ + L++ +D+ A
Sbjct: 412 LNSDPRFNELDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEAL 471
Query: 270 SVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALL 329
+ V PS R +P V+W +IG L+ ++ +LQ A+ PIK + +GIS G LL
Sbjct: 472 AKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLL 531
Query: 330 HGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
GPPGC KT LAKA A+ ++A+F S+ G EL + YVGESE +R F RAR ++P +IFF
Sbjct: 532 WGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFF 591
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
DE D + +R S S + R+++TLLTE+DGL
Sbjct: 592 DELDAMVPRRDDSLSEA---SSRVVNTLLTELDGL 623
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 134/236 (56%), Gaps = 16/236 (6%)
Query: 15 WKAEEAIGGNRAAVE-ALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAV 73
W A+ R ++ A+ + I P LY Q +G+ P G+LL+GPPG GKT L +AV
Sbjct: 491 WNNIGALKSIRVELQMAIVQPIKRPELY----QSVGISAPTGVLLWGPPGCGKTLLAKAV 546
Query: 74 VRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
E A+ I + +VGESE+A+R+ F +A + + P V+F DE+DA+ PRRD
Sbjct: 547 ANESKANFISIRGPELLNKYVGESERAVRQVFLRARASS----PCVIFFDELDAMVPRRD 602
Query: 134 HR-REQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVT 192
E R+ + L T +D + V V+A+TNR D IDPA+ R GR D + V
Sbjct: 603 DSLSEASSRVVNTLLTELDG----LSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVD 658
Query: 193 VPTAEERFEILKLYTKKVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK 246
+P A ER EILK TK+ PL V+L+ + C+ + GADL AL REA ++A++
Sbjct: 659 LPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALR 714
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
++ DIGGL D +L + V PIKH + GI P RG LLHGPPGC KT LA A A+
Sbjct: 171 ISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALAN 230
Query: 347 AAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
F S+S + S GESE +R F+ A+ AP ++F DE D V KR S
Sbjct: 231 ELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR---ESAQ 287
Query: 407 ITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
+ R+++ LT MD L K P+ I
Sbjct: 288 REMERRIVAQFLTCMDELSFEKTDGKPVLVI 318
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 248/439 (56%), Gaps = 35/439 (7%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
GG + ++ L + FP+L +K+G+K P G+L +GPPG GKT L A+ E G
Sbjct: 235 FGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVP 294
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQD 139
IS V G SE+ +RE FS+A A PS+VFIDEIDA+ +R+++ RE +
Sbjct: 295 FYKISATEVISGVSGASEENIRELFSKAYRTA----PSIVFIDEIDAIGSKRENQQREME 350
Query: 140 VRIASQLFTLMDS--NKPSK----TSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTV 193
RI +QL T MD NK K +S V+V+ +TNR DA+DPALRRSGRF+ E+ +T
Sbjct: 351 KRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTA 410
Query: 194 PTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDA-- 251
P + R EIL + +K+ L+ D + IA G+VGADLE++ A A+KR D+
Sbjct: 411 PDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRK 470
Query: 252 NECAG-------------------VLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDI 292
+E +G L V M D+ A ++V S+TR +P V W+D+
Sbjct: 471 SEQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDV 530
Query: 293 GGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASF 352
GGL L+ + + + PIK + G+ G LL+GPPGC KT +AKAAA+ A A+F
Sbjct: 531 GGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANF 590
Query: 353 FSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGER 412
+ GAEL + YVGESE +R FQRAR AP +IFFDE D + RG + + ER
Sbjct: 591 MHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVV---ER 647
Query: 413 LLSTLLTEMDGLEQAKVII 431
LL+ L E+DG E+ V +
Sbjct: 648 LLNQFLVELDGGERRNVYV 666
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 137/274 (50%), Gaps = 21/274 (7%)
Query: 14 KWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAV 73
KW + +GG I P+ + G+ G LLYGPPG GKT + +A
Sbjct: 526 KW---DDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAA 582
Query: 74 VRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
E GA+ I + +VGESE A+R F +A + A P V+F DE+DAL R
Sbjct: 583 ANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCA----PCVIFFDEVDALTTSRG 638
Query: 134 HRREQDV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVT 192
V R+ +Q +D + +V V+ +TNR D +DPA R GRF + V
Sbjct: 639 KEGAWVVERLLNQFLVELDGGERR-----NVYVIGATNRPDVVDPAFLRPGRFGNLLYVP 693
Query: 193 VPTAEERFEILKLYTKKVPLDANVDLEAIA-TSCNGYVGADLEALCREATMSAVKR---- 247
+P A+ER ILK +K P+D +VDL+ IA +C G+ GADL L ++AT AV+
Sbjct: 694 LPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGS 753
Query: 248 -SSDANECAGVLSVTMED--WRHARSVVGPSITR 278
S ++ + T++ + A S+V PS+ +
Sbjct: 754 SESSEDDVTDITQCTIKTRHFEQALSLVSPSVNK 787
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Query: 288 TWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHA 347
T++D GG++ + +L+ V +PI + F ++G+ P G L HGPPGC KT LA A A+
Sbjct: 231 TFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANE 290
Query: 348 AEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSI 407
A F+ +S E+ S G SE +R F +A APSI+F DE D +G+KR +
Sbjct: 291 AGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR---ENQQR 347
Query: 408 TVGERLLSTLLTEMDG 423
+ +R+++ LLT MDG
Sbjct: 348 EMEKRIVTQLLTCMDG 363
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 278 bits (712), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 249/489 (50%), Gaps = 87/489 (17%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
+GG + + +RE I +P+ + LG++ PRG+LL+GP G GKT L +A+ E
Sbjct: 218 LGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVP 277
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RREQD 139
L IS + GESE +R FS A + A P ++FIDEIDA+ P+R+ ++ +
Sbjct: 278 LFAISATEITSGVSGESEARVRTLFSNAIAQA----PCIIFIDEIDAIAPKRESASKDME 333
Query: 140 VRIASQLFTLMDS----------NKPSKTSVP---------------------------- 161
RI SQL T MDS N+P++ +
Sbjct: 334 RRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQ 393
Query: 162 --------HVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLD 213
HV+V+ +TNR +++D ALR GRFD E+ + +P R +ILK+ T K+ L+
Sbjct: 394 QKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLE 453
Query: 214 ANVDLEAIATSCNGYVGADLEALCREATMSAVKR--SSDAN------------------- 252
N D E IAT GYVGAD+ L +EA ++V R +S+ N
Sbjct: 454 NNFDYEEIATLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNI 513
Query: 253 ---------------ECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRD 297
E L + M D++ A V P+ R IP VTW+D+G L
Sbjct: 514 GLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSG 573
Query: 298 LKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSG 357
++++L ++ PI++ + +GI G L++GPPGC KT LAKA A +A+F S+ G
Sbjct: 574 VREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKG 633
Query: 358 AELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTL 417
EL + YVGESE +R FQRA ++P +IFFDE D + KRGG ER+++ L
Sbjct: 634 PELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQL 693
Query: 418 LTEMDGLEQ 426
LTEMDGLE+
Sbjct: 694 LTEMDGLEK 702
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 158/294 (53%), Gaps = 19/294 (6%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVR 71
N W A+ G R E L I P+ Y + + +G+ P G+L+YGPPG GKT L +
Sbjct: 562 NVTWDDVGALSGVR---EELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAK 618
Query: 72 AVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPR 131
A+ EC A+ + + +VGESE+A+R+ F +A++ + P V+F DE DAL P+
Sbjct: 619 AIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASS----PCVIFFDEFDALAPK 674
Query: 132 R----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDA 187
R + R+ +QL T MD + V ++A+TNR D ID A+ R GR D
Sbjct: 675 RGGGDGGGNQATERVVNQLLTEMDGLEKRS----EVFIIAATNRPDIIDAAMCRPGRLDK 730
Query: 188 EVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAV 245
V V +P+ EER EILK T K+P+ +VDL + T C+ + GADL L +EA A+
Sbjct: 731 MVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAI 790
Query: 246 KRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLK 299
R D N +VTMED+ A S + PS++R + K+ DI RD K
Sbjct: 791 SRGFDNNSTEPD-TVTMEDFIFALSKIKPSVSRKDELMYDKLN-NDINKSRDKK 842
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 284 IPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKA 343
IP + + ++GG+ + +++ +E+PI H +S LG+ P RG LLHGP GC KT LAKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 344 AAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSS 403
A + F++S E+ S GESEA +R F A AP IIF DE D + KR
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR---E 326
Query: 404 STSITVGERLLSTLLTEMDGL 424
S S + R++S LLT MD L
Sbjct: 327 SASKDMERRIVSQLLTCMDSL 347
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 278 bits (711), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 174/459 (37%), Positives = 244/459 (53%), Gaps = 62/459 (13%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN A ++ + +++ + + Q LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 264 EDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 322
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P +VFIDEIDA+ P+R+ ++
Sbjct: 323 LPILKVAAPEIVSGVSGESEQKLRELFDQAVSNA----PCIVFIDEIDAITPKREVASKD 378
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTA 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD EV + +P
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDE 436
Query: 197 EERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR--------- 247
R IL+ +K+ L + +A G+VGADL ALCREA M AV R
Sbjct: 437 AARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQ 496
Query: 248 -----------SSDANECAGV------------------------------LSVTMEDWR 266
D E G L + + D+
Sbjct: 497 KKKPEIEGLPSEGDQEERLGAEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFI 556
Query: 267 HARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRG 326
A + V PS R V +P VTW DIG L D++ +L A+ P+++ F LG+ G
Sbjct: 557 VALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAG 616
Query: 327 ALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSI 386
LL GPPGC KT LAKA A+ + +F S+ G EL +MYVGESE +R FQRA+ +AP +
Sbjct: 617 ILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCV 676
Query: 387 IFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
IFFDE D + +R S R+++ LLTEMDGLE
Sbjct: 677 IFFDEVDALCPRR---SDRETGASVRVVNQLLTEMDGLE 712
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 150/265 (56%), Gaps = 21/265 (7%)
Query: 26 AAVEALRE----LITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
A+E +R+ I P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 583 GALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNF 642
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDV 140
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R V
Sbjct: 643 ISVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASV 698
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERF 200
R+ +QL T MD + + V ++A+TNR D IDPA+ R GR D + V +P +R
Sbjct: 699 RVVNQLLTEMDGLETRQ----QVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRV 754
Query: 201 EILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRSSDANEC- 254
ILK TK K PLD +V+LE IA CN Y GADL AL REA++ A+++ A +
Sbjct: 755 AILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNG 814
Query: 255 --AGVLSVTMEDWRHARSVVGPSIT 277
AG L V+ + + A V PSI+
Sbjct: 815 VGAGELKVSHKHFEDAFKKVKPSIS 839
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 278 RGVTVEIPKVTWEDIGG----LRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPP 333
R ++I V +ED+GG L+++ K L ++H + LG+ P RG LLHGPP
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH-----MRHPEVYQHLGVVPPRGVLLHGPP 306
Query: 334 GCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEAD 393
GC KT LA A A + ++ E+ S GESE LR F +A AP I+F DE D
Sbjct: 307 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEID 366
Query: 394 VVGAKRGGSSSTSITVGERLLSTLLTEMDGL 424
+ KR +S + R+++ LLT MD L
Sbjct: 367 AITPKREVASK---DMERRIVAQLLTCMDDL 394
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 244/459 (53%), Gaps = 62/459 (13%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GGN ++ + +++ + + LG+ PRG+LL+GPPG GKT L A+ E
Sbjct: 265 EDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELD 323
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD-HRRE 137
+ ++ + GESE+ LRE F QA S+A P ++FIDEIDA+ P+R+ ++
Sbjct: 324 LPILKVAAPEIVSGVSGESEQKLRELFEQAVSNA----PCIIFIDEIDAITPKREVASKD 379
Query: 138 QDVRIASQLFTLMDS-NKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTA 196
+ RI +QL T MD N + T+ V+V+ +TNR D++DPALRR+GRFD E+ + +P
Sbjct: 380 MERRIVAQLLTCMDDLNNVAATA--RVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 437
Query: 197 EERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR--------- 247
R IL+ +K+ L D +A G+VGADL ALCREA M AV R
Sbjct: 438 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQ 497
Query: 248 ------------------------SSDANECAGVL-----------------SVTMEDWR 266
S +E +L + + D+
Sbjct: 498 KKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFI 557
Query: 267 HARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRG 326
A S V PS R V +P VTW DIG L D++++L A+ P+++ F LG+ G
Sbjct: 558 VALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAG 617
Query: 327 ALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSI 386
LL GPPGC KT LAKA A+ + +F S+ G EL +MYVGESE +R FQRA+ +AP +
Sbjct: 618 VLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCV 677
Query: 387 IFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
IFFDE D + +R S R+++ LLTEMDGLE
Sbjct: 678 IFFDEVDALCPRR---SDRETGASVRVVNQLLTEMDGLE 713
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 152/267 (56%), Gaps = 23/267 (8%)
Query: 26 AAVEALRELITF----PLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHL 81
A+E +RE +T P+ Q + LGL P G+LL GPPG GKT L +AV E G +
Sbjct: 584 GALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNF 643
Query: 82 TVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRRE-QDV 140
+ + +VGESE+A+R+ F +A + A P V+F DE+DALCPRR R V
Sbjct: 644 ISVKGPELLNMYVGESERAVRQVFQRAKNSA----PCVIFFDEVDALCPRRSDRETGASV 699
Query: 141 RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERF 200
R+ +QL T MD + + V ++A+TNR D IDPA+ R GR D + V +P +R
Sbjct: 700 RVVNQLLTEMDGLEARQ----QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL 755
Query: 201 EILKLYTK---KVPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVK----RSSDA 251
ILK TK K PLDA+V+LEAIA C+ Y GADL AL REA++ A++ R
Sbjct: 756 AILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSG 815
Query: 252 NECAGVLSVTMEDWRHARSVVGPSITR 278
NE G L V+ + + A V SI++
Sbjct: 816 NE-KGELKVSHKHFEEAFKKVRSSISK 841
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 278 RGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSK 337
RG+ +I V +ED+GG D+ K + ++H + LG+ P RG LLHGPPGC K
Sbjct: 253 RGLEFQISNVKFEDVGG-NDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGK 311
Query: 338 TTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGA 397
T LA A A + ++ E+ S GESE LR F++A AP IIF DE D +
Sbjct: 312 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITP 371
Query: 398 KRGGSSSTSITVGERLLSTLLTEMDGL 424
KR +S + R+++ LLT MD L
Sbjct: 372 KREVASK---DMERRIVAQLLTCMDDL 395
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 245/474 (51%), Gaps = 68/474 (14%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG V L ELI P+L+ G++ PRG+LL+GPPG GKTS+ A+ E
Sbjct: 205 KSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQ 264
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD--HRR 136
IS SV GESEK +R+ F +A S A P +VF DEIDA+ P+RD +R
Sbjct: 265 VPFISISAPSVVSGMSGESEKKIRDLFDEARSLA----PCLVFFDEIDAITPKRDGGAQR 320
Query: 137 EQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTA 196
E + RI +QL T MD KT+ V+++ +TNR D++D ALRR+GRFD E+ + VP
Sbjct: 321 EMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNE 380
Query: 197 EERFEILKLYTKKVPLDANV---------------DLEAIATSCNG-------YVGADLE 234
R ILK + + +D + DL+A+ T+ A+++
Sbjct: 381 VSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIK 440
Query: 235 ALCREATMSA-----VKRSSDANECA--------------------------------GV 257
+ AT S+ + +++ +E + +
Sbjct: 441 STPTTATDSSEDNMEIDETANGDESSLKNTANMIDPLPLSVVQQFIRNYPEPLSGEQLSL 500
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
LS+ ED+ A + P+ R +P VTW ++G L+ ++ +L A+ PIK +
Sbjct: 501 LSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYE 560
Query: 318 RLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQ 377
++GIS G LL GPPGC KT LAKA A+ + A+F S+ G EL + YVGESE +R F
Sbjct: 561 KVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFT 620
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
RAR + P +IFFDE D + +R S S S R+++TLLTE+DGL + I
Sbjct: 621 RARASVPCVIFFDELDALVPRRDTSLSES---SSRVVNTLLTELDGLNDRRGIF 671
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 146/274 (53%), Gaps = 38/274 (13%)
Query: 30 ALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSV 89
A+ + I P LY +K+G+ P G+LL+GPPG GKT L +AV E A+ I +
Sbjct: 548 AIVQPIKRPELY----EKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPEL 603
Query: 90 HKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHR-REQDVRIASQLFT 148
+VGESE+++R+ F++A + P V+F DE+DAL PRRD E R+ + L T
Sbjct: 604 LNKYVGESERSIRQVFTRARASV----PCVIFFDELDALVPRRDTSLSESSSRVVNTLLT 659
Query: 149 LMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTK 208
+D + + V+ +TNR D IDPA+ R GR D + + +P EE+ +I+K TK
Sbjct: 660 ELDGLNDRR----GIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTK 715
Query: 209 K--VPLDANVDLEAIATS--CNGYVGADLEALCREATMSAVKRS-SDANECAGVLS---- 259
PL ++VD E I + CN + GADL AL RE+++ A+KR + E VL
Sbjct: 716 SHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLD 775
Query: 260 ----------------VTMEDWRHARSVVGPSIT 277
VTM D+R A + PS++
Sbjct: 776 KEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVS 809
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAA 344
P + + +GG+ D+ +L + + PI H F G+ P RG LLHGPPGC KT++A A
Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 345 AHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
A + F S+S + S GESE +R+ F AR AP ++FFDE D + KR G +
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQ 319
Query: 405 TSITVGERLLSTLLTEMDGLEQAKVIIYPISFI 437
+ R+++ LLT MD L K P+ I
Sbjct: 320 REME--RRIVAQLLTSMDELTMEKTNGKPVIII 350
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum
(isolate 3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG + + +RELI PL Y +G+ P+G+L++G PGTGKTS+ +A+ E
Sbjct: 527 EDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANESN 586
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDH-RRE 137
A+ +I+ + H+GESE+ LR+ F +AS P ++FIDEID++ +R E
Sbjct: 587 AYCYIINGPEIMSKHIGESEQKLRKIFKKASEKT----PCIIFIDEIDSIANKRSKSNNE 642
Query: 138 QDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
+ R+ SQL TLMD K + +V+V+A+TNR ++IDPALRR GRFD E+E+ VP +
Sbjct: 643 LEKRVVSQLLTLMDGLKKNN----NVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQ 698
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVK 246
R+EIL TKK+ LD +V+L IA C+GYVGADL LC EA + +K
Sbjct: 699 GRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIK 747
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 119/174 (68%), Gaps = 2/174 (1%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
L++ + ++HA ++ PS R V+IP VTW DIGG+ ++K++L++ + +P+++ ++
Sbjct: 902 LTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYN 961
Query: 318 RLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQ 377
+ + +G LL+GPPGC KT LAKA A+ +A+F S+ G EL +M+ GESEA +R+ F
Sbjct: 962 KFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFD 1021
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
+AR A+P IIFFDE D + +R +S+T+ +R+++ +LTE+DG+ + K I
Sbjct: 1022 KARAASPCIIFFDEIDSLAKER--NSNTNNDASDRVINQILTEIDGINEKKTIF 1073
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 10/230 (4%)
Query: 21 IGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAH 80
IGG E L+E I +PL Y K + +G+LLYGPPG GKT L +A+ EC A+
Sbjct: 936 IGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKAN 995
Query: 81 LTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDV 140
+ + GESE +R+ F +A + P ++F DEID+L R+ D
Sbjct: 996 FISVKGPELLTMWFGESEANVRDLFDKARA----ASPCIIFFDEIDSLAKERNSNTNNDA 1051
Query: 141 --RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEE 198
R+ +Q+ T +D KT + ++A+TNR D +D AL R GR D + +++P +
Sbjct: 1052 SDRVINQILTEIDGINEKKT----IFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKS 1107
Query: 199 RFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRS 248
R+ I K K PL+ +VD+ +A G+ GAD+ LC+ A A+K +
Sbjct: 1108 RYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET 1157
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
+T+ED+GG++ K+++ +E P+K+ F +GIS +G L+HG PG KT++AKA A+
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 347 AAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSSTS 406
+ A + ++G E+ S ++GESE LR F++A P IIF DE D + KR S++
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNN-- 641
Query: 407 ITVGERLLSTLLTEMDGLEQAKVII 431
+ +R++S LLT MDGL++ ++
Sbjct: 642 -ELEKRVVSQLLTLMDGLKKNNNVL 665
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 204/390 (52%), Gaps = 26/390 (6%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ +S +A+ S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSL----CADSSRAVETKLQATFSRARRC 522
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQL-FTLMDSNKPSKTSVPHVVVVASTNRVDA 174
+P+V+ + +D L RD E D R+A+ L L+D + S+ P ++VVA+T+RV
Sbjct: 523 RPAVLLLTAVDLLGRDRDGLGE-DARVAATLRHLLLDEDALSR--CPPLMVVATTSRVQD 579
Query: 175 IDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLE 234
+ ++ + F E+EV V + +R IL+ T +PL V+L +A C G+V DL
Sbjct: 580 LPTDVQTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLY 637
Query: 235 AL----CREA--------TMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSITRGVTV 282
AL CR A + + + + C + ED+ A + + ++ V
Sbjct: 638 ALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGA 697
Query: 283 -EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLA 341
IP V+W D+GGL+D+KK++ + ++ P++H S G LLHGPPG KT LA
Sbjct: 698 PRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRR--SGLLLHGPPGTGKTLLA 755
Query: 342 KAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
KA A +F S+ G EL +MYVG+SE +R F RAR AAP IIFFDE D + R G
Sbjct: 756 KAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR-G 814
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKVII 431
S S V +R++S LL E+DGL + +
Sbjct: 815 RSGDSGGVMDRVVSQLLAELDGLHSTQDVF 844
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 127/232 (54%), Gaps = 24/232 (10%)
Query: 59 YGPPGTGKTSLVRAVVRECG-AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKP 117
+GPPGTGKT L +AV EC L+V P ++ +VG+SE+ +RE F++A + A P
Sbjct: 744 HGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEENVREVFARARAAA----P 798
Query: 118 SVVFIDEIDALCPRRDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
++F DE+D+L P R + R+ SQL +D S V V+ +TNR D
Sbjct: 799 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDL 854
Query: 175 IDPALRRSGRFDAEVEVTVPTAEER---FEILKLYTKKVPLDANVDLEAIATSCNGYV-G 230
+DPAL R GRFD V V +E+R +L T+K L+A+V L + C + G
Sbjct: 855 LDPALLRPGRFDKLVFVG--ASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTG 912
Query: 231 ADLEALCREATMSAVKRS-SDANEC----AGVLSVTMEDWRHARSVVGPSIT 277
ADL +LC +A M+A+KR D E + L +TMED A + + PS++
Sbjct: 913 ADLYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAARLQPSVS 964
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 203/389 (52%), Gaps = 24/389 (6%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG GKT++V A G HL + S+ G E L+ FS+A
Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRC---- 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+P+V+ + +D L RD E D R+ + L L+ + P S P ++VVA+T+R +
Sbjct: 522 RPAVLLLTAVDLLGRDRDGLGE-DARVMAVLRHLLLNEDP-LNSCPPLMVVATTSRAQDL 579
Query: 176 DPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
++ + F E+EV + +R IL+ T +PL V+L +A C G+V DL A
Sbjct: 580 PADVQTA--FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYA 637
Query: 236 LCREATMSAVKR-----------SSDANE-CAGVLSVTMEDWRHARSVVGPSITRGVTV- 282
L ++ +A R D E CA + ED+ A + + ++ V
Sbjct: 638 LLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAP 697
Query: 283 EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAK 342
+IP V+W D+GGL+++KK++ + ++ P++H S G LLHGPPG KT LAK
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRR--SGLLLHGPPGTGKTLLAK 755
Query: 343 AAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGS 402
A A +F S+ G EL +MYVG+SE +R F RAR AAP IIFFDE D + R G
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR-GR 814
Query: 403 SSTSITVGERLLSTLLTEMDGLEQAKVII 431
S S V +R++S LL E+DGL + +
Sbjct: 815 SGDSGGVMDRVVSQLLAELDGLHSTQDVF 843
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 124/232 (53%), Gaps = 24/232 (10%)
Query: 59 YGPPGTGKTSLVRAVVRECG-AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKP 117
+GPPGTGKT L +AV EC L+V P ++ +VG+SE+ +RE F++A + A P
Sbjct: 743 HGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEENVREVFARARAAA----P 797
Query: 118 SVVFIDEIDALCPRRDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
++F DE+D+L P R + R+ SQL +D S V V+ +TNR D
Sbjct: 798 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDL 853
Query: 175 IDPALRRSGRFDAEVEVTVPTAEER---FEILKLYTKKVPLDANVDLEAIATSCNGYV-G 230
+DPAL R GRFD V V E+R +L T+K L+ +V L + C + G
Sbjct: 854 LDPALLRPGRFDKLVFVG--ANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTG 911
Query: 231 ADLEALCREATMSAVKRS-SDANE----CAGVLSVTMEDWRHARSVVGPSIT 277
ADL +LC +A +A+KR D E + L +TMED A + + PS++
Sbjct: 912 ADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVS 963
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 186 bits (472), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 206/402 (51%), Gaps = 29/402 (7%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFS 106
K + LLL GP G GK +L+ V ++ G H+ + + ++ + + +R
Sbjct: 661 KFSFDFNCTLLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLE 720
Query: 107 QASSHALSGKPSVVFIDEIDAL--CPRRDHRREQDVRIASQLFTLM----DSNKPSKTSV 160
QAS+ P+++ + + L + + +++ ++ L ++ DSN + S
Sbjct: 721 QASNST----PTLLILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSN 776
Query: 161 PH-VVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLD--ANVD 217
+ +++ + N +D + +R F E+ + P +RF+ILK TK +P+D V
Sbjct: 777 KYPLIITVTVNSMDELSNKVR--NWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVS 834
Query: 218 LEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPSIT 277
++ ++ ++ ++L AL + ++++A+KR + +E + V+G I
Sbjct: 835 IKNLSIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQ 894
Query: 278 RGVTV------------EIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR 325
+ ++ +IP V+W+D+GGL ++K ++ ++ P++H F+ GI
Sbjct: 895 KSLSEMQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRS 953
Query: 326 GALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPS 385
G LL GPPG KT LAKA A +F S+ G EL +MY+GESE +R F +AR A P
Sbjct: 954 GILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPC 1013
Query: 386 IIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQA 427
+IFFDE D + RG + + V +R++S LL E+DG++++
Sbjct: 1014 VIFFDELDSLAPSRGNGADSG-GVMDRVVSQLLAELDGMQKS 1054
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 125/243 (51%), Gaps = 27/243 (11%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPL----LYSSQAQKLGLKWPRGLLLYGPPGTGKT 67
N W + +GG + + I PL L++S G+ G+LL+GPPGTGKT
Sbjct: 915 NVSW---DDVGGLANVKSEIMDTIQLPLEHPHLFAS-----GIGKRSGILLFGPPGTGKT 966
Query: 68 SLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
L +A+ EC + + + ++GESEK +RE F++A KP V+F DE+D+
Sbjct: 967 LLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKAR----QAKPCVIFFDELDS 1022
Query: 128 LCPRR----DHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSG 183
L P R D D R+ SQL +D + S V ++ +TNR D +D +L R G
Sbjct: 1023 LAPSRGNGADSGGVMD-RVVSQLLAELDGMQKSS----DVFIIGATNRPDLLDSSLMRPG 1077
Query: 184 RFDAEVEVTVPTAEE-RFEILKLYTKKVPLDANVDLEAIATSC-NGYVGADLEALCREAT 241
R D + + + + +E +F+IL+ T+K L +VDL + +C GAD AL +A
Sbjct: 1078 RLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAM 1137
Query: 242 MSA 244
+A
Sbjct: 1138 SNA 1140
>sp|P54777|PEX6_RAT Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1
Length = 978
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 204/387 (52%), Gaps = 22/387 (5%)
Query: 56 LLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSG 115
+LL GPPG+GKT+ V A G HL + S+ E L+ FS+A
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRC---- 521
Query: 116 KPSVVFIDEIDALCPRRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAI 175
+P V+ + +D L RD E D R+ + L L+ P + P ++VVA+T+RV +
Sbjct: 522 RPVVLLLTALDLLGRDRDGLGE-DARVVATLRHLLLDEDP-LSRCPPLMVVATTSRVQDL 579
Query: 176 DPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEA 235
+R + F E+EV V + +R +L+ T +PL V+L +A C G+V DL A
Sbjct: 580 PTDVRTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYA 637
Query: 236 LCREATMSAVKR-------SSDANE---CAGVLSVTMEDWRHARSVVGPSITRGVTV-EI 284
L A+ +A R S+ +E CA + ED+ A + + ++ V +I
Sbjct: 638 LLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKI 697
Query: 285 PKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAA 344
P V+W D+GGL+D+KK++ + ++ P++H S G LLHGPPG KT LAKA
Sbjct: 698 PSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRR--SGLLLHGPPGTGKTLLAKAV 755
Query: 345 AHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGGSSS 404
A +F S+ G EL +MYVG+SE +R F RAR AAP IIFFDE D + R G S
Sbjct: 756 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR-GRSG 814
Query: 405 TSITVGERLLSTLLTEMDGLEQAKVII 431
S V +R++S LL E+DGL + +
Sbjct: 815 DSGGVMDRVVSQLLAELDGLHSTQDVF 841
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 127/232 (54%), Gaps = 24/232 (10%)
Query: 59 YGPPGTGKTSLVRAVVRECG-AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKP 117
+GPPGTGKT L +AV EC L+V P ++ +VG+SE+ +RE F++A + A P
Sbjct: 741 HGPPGTGKTLLAKAVATECSLTFLSVKGPELINM-YVGQSEENVREVFARARAAA----P 795
Query: 118 SVVFIDEIDALCPRRDHRREQDV---RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDA 174
++F DE+D+L P R + R+ SQL +D S V V+ +TNR D
Sbjct: 796 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH----STQDVFVIGATNRPDL 851
Query: 175 IDPALRRSGRFDAEVEVTVPTAEER---FEILKLYTKKVPLDANVDLEAIATSCNGYV-G 230
+DPAL R GRFD V V +E+R +L T+K L+A+V L + C + G
Sbjct: 852 LDPALLRPGRFDKLVFVG--ASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTG 909
Query: 231 ADLEALCREATMSAVKRS-SDANEC----AGVLSVTMEDWRHARSVVGPSIT 277
ADL +LC +A M+A+KR D E + L +TMED A + + PS++
Sbjct: 910 ADLYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSVS 961
>sp|Q9LET7|CI111_ARATH Calmodulin-interacting protein 111 OS=Arabidopsis thaliana
GN=CIP111 PE=1 SV=1
Length = 1022
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 258 LSVTMEDWRHARSVVGPSITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFS 317
LSV ED+ +A++ + PS R V +E+PKV WED+GG ++K +L +AVEWP KH AF
Sbjct: 692 LSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFK 751
Query: 318 RLGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQ 377
R+G P G L+ GPPGCSKT +A+A A A+ +F ++ G EL+S +VGESE +R+ F
Sbjct: 752 RIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFA 811
Query: 378 RARLAAPSIIFFDEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLEQ 426
+AR APSIIFFDE D + + R G + ++V +R++S LL E+DGL Q
Sbjct: 812 KARANAPSIIFFDEIDSLASIR-GKENDGVSVSDRVMSQLLVELDGLHQ 859
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 130/205 (63%), Gaps = 10/205 (4%)
Query: 48 LGLKWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQ 107
LGL+ +G+L++GPPGTGKTSL R R G + ++ + ++GESEKAL E F
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRS 472
Query: 108 ASSHALSGKPSVVFIDEIDALCP-RRDHRREQDVRIASQLFTLMDSNKPSKTSVPHVVVV 166
AS + P+VVFID++DA+ P R++ E R+ + L LMD S+T VVV+
Sbjct: 473 AS----NATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDG--ISRTD--GVVVI 524
Query: 167 ASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLD-ANVDLEAIATSC 225
A+TNR D+I+PALRR GR D E+E+ VP++ +R +IL + + + +N+ +E +A +
Sbjct: 525 AATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMAT 584
Query: 226 NGYVGADLEALCREATMSAVKRSSD 250
+G+VGADL ALC EA ++R D
Sbjct: 585 HGFVGADLSALCCEAAFVCLRRHLD 609
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 21/262 (8%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG L E + +P + +++G + P G+L++GPPG KT + RAV E
Sbjct: 724 EDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAK 783
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ + + VGESEKA+R F++A ++A PS++F DEID+L R +E
Sbjct: 784 LNFLAVKGPELFSKWVGESEKAVRSLFAKARANA----PSIIFFDEIDSLASIRG--KEN 837
Query: 139 D-----VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTV 193
D R+ SQL +D V V+A+TNR D ID AL R GRFD + V
Sbjct: 838 DGVSVSDRVMSQLLVELDGLHQRVG----VTVIAATNRPDKIDSALLRPGRFDRLLYVGP 893
Query: 194 PTAEERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKRSSDANE 253
P +R ILK++ +K+P +++ L+ +A+ GY GAD+ +CREA ++A++ S + E
Sbjct: 894 PNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEE 953
Query: 254 CAGVLSVTMEDWRHARSVVGPS 275
++M + A S + P+
Sbjct: 954 ------ISMRHLKAAISQIEPT 969
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
Query: 319 LGISPVRGALLHGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQR 378
LG+ P +G L+HGPPG KT+LA+ A + +FFS++G E+ S Y+GESE L F+
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRS 472
Query: 379 ARLAAPSIIFFDEADVVGAKR--GGSSSTSITVGERLLSTLLTEMDGLEQAKVII 431
A A P+++F D+ D + R GG + +R+++TLL MDG+ + ++
Sbjct: 473 ASNATPAVVFIDDLDAIAPARKEGGEE-----LSQRMVATLLNLMDGISRTDGVV 522
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1
PE=2 SV=2
Length = 1130
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 192/396 (48%), Gaps = 23/396 (5%)
Query: 47 KLGLKWPRGLLLYGPPGTGKTSLVRAVVR------ECGAHLTVISPHSVHKAHVGESEKA 100
K + P +L+YGPPG+GKT L RA + + AH+ ++S ++ V
Sbjct: 587 KFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHV 646
Query: 101 LREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQDVRIASQLFT-LMDSN---KPS 156
L ++ HA S I + + V + ++ T ++D + S
Sbjct: 647 LSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNS 706
Query: 157 KTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDANV 216
+ + VAS ++ I L SGRFD V++ P ER ILK +K LD +
Sbjct: 707 SCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSE 766
Query: 217 D-LEAIATSCNGYVGADLEALCREATMSAVKRSSDANECAGVLSVTMEDWRHARSVVGPS 275
D L +A C GY DLE L A +A+ R ++ ED+ A P
Sbjct: 767 DILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPV 826
Query: 276 ITRGVT---VEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVR---GALL 329
R +T E ++ WED+GG+ D+K +++ +E P K F++ SP+R LL
Sbjct: 827 AMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAK---SPLRLRSNVLL 883
Query: 330 HGPPGCSKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
+GPPGC KT + AAA A F S+ G EL + Y+G SE +R+ F +A AAP I+FF
Sbjct: 884 YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFF 943
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEMDGLE 425
DE D + KRG ++ V +R+++ LTE+DG+E
Sbjct: 944 DEFDSIAPKRGHDNT---GVTDRVVNQFLTELDGVE 976
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 9/228 (3%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
E +GG A++E+I P + K L+ +LLYGPPG GKT +V A C
Sbjct: 844 EDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACS 903
Query: 79 AHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRDHRREQ 138
+ + ++G SE+A+R+ FS+A++ A P ++F DE D++ P+R H
Sbjct: 904 LRFISVKGPELLNKYIGASEQAVRDIFSKAAAAA----PCILFFDEFDSIAPKRGHDNTG 959
Query: 139 DV-RIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVTVPTAE 197
R+ +Q T +D + + V V A+T+R D +DPAL R GR D + P+
Sbjct: 960 VTDRVVNQFLTELDGVE----VLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPP 1015
Query: 198 ERFEILKLYTKKVPLDANVDLEAIATSCNGYVGADLEALCREATMSAV 245
ER EIL + ++K+ + ++DLE IA G+ GADL+AL +A ++AV
Sbjct: 1016 ERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAV 1063
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 277 TRGVTVEIPKVTWEDIGGL-RDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGC 335
+GV+ +I +TW +G + D+ K++ V FS+ I L++GPPG
Sbjct: 549 NKGVSPDISSLTW--MGPIVSDVIKRM--TVLLSPAAGMWFSKFKIPSPGHILIYGPPGS 604
Query: 336 SKTTLAKAAAHAAE------ASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFF 389
KT LA+AAA E A +S + L V +L + APS+I
Sbjct: 605 GKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVIIL 664
Query: 390 DEADVVGAKRGGSSSTSITVGERLLSTLLTEM 421
D+ D + + + T +VG +L+ LT++
Sbjct: 665 DDLDSIISSSSDTEGTQASVGVTMLTKFLTDV 696
>sp|Q5RDX4|ATAD2_PONAB ATPase family AAA domain-containing protein 2 OS=Pongo abelii
GN=ATAD2 PE=2 SV=1
Length = 1091
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 155/280 (55%), Gaps = 27/280 (9%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 257 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 316
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F Q A +PS++F DEID L P R
Sbjct: 317 QGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQ----AYQMRPSIIFFDEIDGLAPVRS 372
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVT 192
R++Q I S L LMD S +VV+ +TNR+DAIDPALRR GRFD E +
Sbjct: 373 SRQDQIHSSIVSTLLALMD----GLDSRGEIVVIGATNRLDAIDPALRRPGRFDREFLFS 428
Query: 193 VPTAEERFEILKLYTKK---VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR-- 247
+P E R EILK++T+ PLD LE +A +C GY GAD++++C EA + A++R
Sbjct: 429 LPDKEARKEILKIHTRDWNPKPLDTF--LEELAENCVGYRGADIKSICAEAALCALRRRY 486
Query: 248 ------SSDANECAGVLSVTMEDWRHARSVVGPSITRGVT 281
S ++++ +D+ A + P+ R VT
Sbjct: 487 PQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAVT 526
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
V ++ +GGL + L++ V +P+ + F + I P RG L +GPPG KT +A+A A+
Sbjct: 254 VRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 313
Query: 347 AA-----EASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
+FF GA+ S +VGESE LR F +A PSIIFFDE D + R
Sbjct: 314 ECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVR-- 371
Query: 402 SSSTSITVGERLLSTLLTEMDGLE 425
SS + ++STLL MDGL+
Sbjct: 372 -SSRQDQIHSSIVSTLLALMDGLD 394
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 192/389 (49%), Gaps = 45/389 (11%)
Query: 62 PGTGKTSLVRAVVRECGAHLT-----VISPHSVHKAHVGESEKALREAFSQASSHALSGK 116
P GKT L R+V E G HL ++ +S ++ +R S+ +
Sbjct: 465 PNVGKTMLTRSVCAELGFHLIHVDCLSLTSNSNTSDATNKTIGYIRAKIETIISYV---E 521
Query: 117 PSVVFIDEIDALCPRRDHRREQD---VRIASQLFTLM-DSNKPSKTSVPHVVVVASTNRV 172
V+F+ ++ + D + +QD ++A Q+ M D + T V V STN +
Sbjct: 522 KVVIFLSHLETIL--EDEQNQQDNTSSKMARQMNVEMADLIEEYTTKYKGTVFVGSTNDI 579
Query: 173 DAIDPALRRSGRFDAEVEVTVPTAEERFEILKLYTKKVPLDA-----------NVDLEAI 221
D I PA+ RS R E++V VPT ++R ++ + Y L++ NV L+ +
Sbjct: 580 DNI-PAIVRS-RIKFEIDVPVPTEKQRLQMFRWYFDPYVLNSQTPKLRSLISHNVPLQTV 637
Query: 222 ATSCNGYVGADLEALCREATMSAVKRSS------DANECAGVLSVTMEDWRHARSVVGPS 275
+ G D+ ++ + +R D + V+++ + R + S+ P
Sbjct: 638 SVQSAGLTPMDIRSIVKAVKYKCYQRLKQNDLLIDMTDITAVINIARD--RFSDSIGAP- 694
Query: 276 ITRGVTVEIPKVTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGC 335
+IP VTW+DIGG+ +K ++ ++ P+KH FS G+ G L +GPPG
Sbjct: 695 -------KIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGT 746
Query: 336 SKTTLAKAAAHAAEASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVV 395
KT LAKA A +FFS+ G EL +MY+GESEA +R FQ+AR A P +IFFDE D V
Sbjct: 747 GKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV 806
Query: 396 GAKRGGSSSTSITVGERLLSTLLTEMDGL 424
KRG + V +R++S LL E+DG+
Sbjct: 807 APKRGNQGDSG-GVMDRIVSQLLAELDGM 834
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 125/245 (51%), Gaps = 24/245 (9%)
Query: 12 NEKWKAEEAIGGNRAAVEALRELITFPL----LYSSQAQKLGLKWPRGLLLYGPPGTGKT 67
N W + IGG + + I PL L+SS G+K G+L YGPPGTGKT
Sbjct: 698 NVTW---DDIGGMDVVKGEIMDTIDMPLKHPELFSS-----GMKKRSGILFYGPPGTGKT 749
Query: 68 SLVRAVVRECGAHLTVISPHSVHKAHVGESEKALREAFSQASSHALSGKPSVVFIDEIDA 127
L +A+ + + + ++GESE +R F +A KP V+F DE+D+
Sbjct: 750 LLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAR----DAKPCVIFFDELDS 805
Query: 128 LCPRRDHRREQD---VRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGR 184
+ P+R ++ + RI SQL +D V V+ +TNR D +D AL R GR
Sbjct: 806 VAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGGDG---VFVIGATNRPDLLDEALLRPGR 862
Query: 185 FDAEVEVTV-PTAEERFEILKLYTKKVPLDANVDLEAIATSCN-GYVGADLEALCREATM 242
FD + + + T +++ I+K T+K L++ +D+ IA C Y GAD ALC +A +
Sbjct: 863 FDKMLYLGISDTDKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDALL 922
Query: 243 SAVKR 247
+A+ R
Sbjct: 923 NAMTR 927
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 140/238 (58%), Gaps = 19/238 (7%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 426 DSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 485
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F Q A +PS++F DEID L P R
Sbjct: 486 QGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQ----AYQMRPSIIFFDEIDGLAPVRS 541
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVT 192
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD E +
Sbjct: 542 SRQDQIHSSIVSTLLALMD----GLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFS 597
Query: 193 VPTAEERFEILKLYTKK---VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR 247
+P E R EILK++T+ PLD LE +A +C GY GAD++++C EA + A++R
Sbjct: 598 LPDKEARKEILKIHTRDWNPKPLDTF--LEELAENCVGYCGADIKSICAEAALCALRR 653
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
V ++ +GGL + L++ V +P+ + F + I P RG L +GPPG KT +A+A A+
Sbjct: 423 VRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 482
Query: 347 AA-----EASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
+FF GA+ S +VGESE LR F +A PSIIFFDE D + R
Sbjct: 483 ECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVR-- 540
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKVII 431
SS + ++STLL MDGL+ I+
Sbjct: 541 -SSRQDQIHSSIVSTLLALMDGLDSRGEIV 569
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 154/278 (55%), Gaps = 23/278 (8%)
Query: 19 EAIGGNRAAVEALRELITFPLLYSSQAQKLGLKWPRGLLLYGPPGTGKTSLVRAVVRECG 78
+++GG + + AL+E++ FPLLY +K ++ PRG L YGPPGTGKT + RA+ EC
Sbjct: 81 DSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALANECS 140
Query: 79 AHLTVISPHSVHKAH-----VGESEKALREAFSQASSHALSGKPSVVFIDEIDALCPRRD 133
++ A VGESE+ LR F Q A +P+++F DEID L P R
Sbjct: 141 RGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQ----AYQMRPAIIFFDEIDGLAPVRS 196
Query: 134 HRREQ-DVRIASQLFTLMDSNKPSKTSVPHVVVVASTNRVDAIDPALRRSGRFDAEVEVT 192
R++Q I S L LMD S +VV+ +TNR+D+IDPALRR GRFD E +
Sbjct: 197 SRQDQIHSSIVSTLLALMD----GLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFS 252
Query: 193 VPTAEERFEILKLYTKK-VPLDANVDLEAIATSCNGYVGADLEALCREATMSAVKR---- 247
+P R EILK++T+ P ++ LE +A C GY GAD++++C EA + A++R
Sbjct: 253 LPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRRYPQ 312
Query: 248 ----SSDANECAGVLSVTMEDWRHARSVVGPSITRGVT 281
S ++++ +D+ A + P+ R VT
Sbjct: 313 IYTTSEKLQLDLSSITISAKDFEAALQKIRPASQRAVT 350
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 8/150 (5%)
Query: 287 VTWEDIGGLRDLKKKLQQAVEWPIKHSTAFSRLGISPVRGALLHGPPGCSKTTLAKAAAH 346
V ++ +GGL L++ V +P+ + F + I P RG L +GPPG KT +A+A A+
Sbjct: 78 VRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 137
Query: 347 AA-----EASFFSLSGAELYSMYVGESEALLRNTFQRARLAAPSIIFFDEADVVGAKRGG 401
+FF GA+ S +VGESE LR F +A P+IIFFDE D + R
Sbjct: 138 ECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVR-- 195
Query: 402 SSSTSITVGERLLSTLLTEMDGLEQAKVII 431
SS + ++STLL MDGL+ I+
Sbjct: 196 -SSRQDQIHSSIVSTLLALMDGLDSRGEIV 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,277,179
Number of Sequences: 539616
Number of extensions: 6288617
Number of successful extensions: 36396
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 1117
Number of HSP's that attempted gapping in prelim test: 30239
Number of HSP's gapped (non-prelim): 4830
length of query: 441
length of database: 191,569,459
effective HSP length: 121
effective length of query: 320
effective length of database: 126,275,923
effective search space: 40408295360
effective search space used: 40408295360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)