BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013509
(441 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 323/446 (72%), Positives = 352/446 (78%), Gaps = 37/446 (8%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q QPP PP QQ Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQHQPPPPQPPPPPPQQQQHFQ---EAPPPNWLNTALLRSSD 57
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTP-NQWLSRTSSSLLHRNH--- 116
++ NFLNL T N + +++ + S A+ NQWLSR SSS L RN+
Sbjct: 58 --------NNNNFLNLHTATANTTTASSSDSPSSAAAAAAANQWLSR-SSSFLQRNNNNN 108
Query: 117 ----SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ 172
D IDDVT D++I ++K EN N+ + ADGVV+WQ
Sbjct: 109 ASIVGDGIDDVTGGADTMI----QGEMKTGGGENKNDGGG---------ATAADGVVSWQ 155
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QG 231
NAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSALGA QG
Sbjct: 156 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG 215
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
LV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG
Sbjct: 216 LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGM 275
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QV+SDAN+FDG L D +GFGPLIPTESERSLMERVRQELKHELKQGYK
Sbjct: 276 GATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQGYK 332
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQIN 411
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETGLQLKQIN
Sbjct: 333 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQIN 392
Query: 412 NWFINQRKRNWHSNPSTSTVLKSKRK 437
NWFINQRKRNWHSNPS+STVLK+KRK
Sbjct: 393 NWFINQRKRNWHSNPSSSTVLKNKRK 418
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 573 bits (1478), Expect = e-163, Method: Compositional matrix adjust.
Identities = 332/454 (73%), Positives = 355/454 (78%), Gaps = 43/454 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQ-------PPSPPQQQHHQHQQSIETTAPNWLNS 53
MA+H NHLSQDLPLHHFTDQ Q QQ P S P + HH Q APNWLNS
Sbjct: 1 MAYH-NHLSQDLPLHHFTDQTHHQHQQYQSDQPDPNSKPPEPHHSFQ-----PAPNWLNS 54
Query: 54 ALLR---------SQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWL 104
ALLR + +NFLNL TA SDS ASQ NQWL
Sbjct: 55 ALLRNFTNTDTNPTNSNNANNNGGGVSNFLNLHVTA-----------SDSAASQASNQWL 103
Query: 105 SRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESG 164
S++ +LHRNHSDV DDVT A DS+IAA S D S ++ S NK+E G
Sbjct: 104 SQSHRPILHRNHSDVNDDVTVAGDSMIAAALSHD-----SADLKPDSILNKNE---GGGG 155
Query: 165 ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS 224
GV+NWQNAR+KAEIL+HPLYE LLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS
Sbjct: 156 DGGVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYS 215
Query: 225 ALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
ALG G+V DDKELDQFM +YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG
Sbjct: 216 ALG--NGMVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 273
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
VSPGEGT ATMSDD++DQVDSDANLFD +EG D+MGFGPLIPTESERSLMERVRQELKH
Sbjct: 274 VSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKH 333
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETG 404
ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPTEEDKARLVQETG
Sbjct: 334 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETG 393
Query: 405 LQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 438
LQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR
Sbjct: 394 LQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 301/448 (67%), Positives = 331/448 (73%), Gaps = 77/448 (17%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFH+NH + HFTDQQQ Q PP QQQH Q E+ PNWL LRS
Sbjct: 1 MAFHNNHFN------HFTDQQQHQPPPPPQQQQQQHFQ-----ESAPPNWL----LRS-- 43
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
D NFLNL T ++ T+SDS +S NQWLSR SSS L R ++
Sbjct: 44 ---------DNNFLNLHTA-----ASAAATSSDSPSSAAANQWLSR-SSSFLQRGNTANN 88
Query: 118 -------DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
DVI+DV +S+I + A+
Sbjct: 89 NNNETSGDVIEDVPGGEESMIGEKKEAE-------------------------------R 117
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L A Q
Sbjct: 118 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQ 177
Query: 231 GLVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
GL+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGE
Sbjct: 178 GLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE 237
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMS+D+++QV+SDA+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQG
Sbjct: 238 GTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQG 294
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQ 409
YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQ
Sbjct: 295 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQ 354
Query: 410 INNWFINQRKRNWHSNPSTSTVLKSKRK 437
INNWFINQRKRNWHSNPS+STV K+KR+
Sbjct: 355 INNWFINQRKRNWHSNPSSSTVSKNKRR 382
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/263 (85%), Positives = 243/263 (92%), Gaps = 3/263 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KAEIL+HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ VV+KYSAL A
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAA-AGD 165
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D +ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGAT
Sbjct: 166 DGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGAT 225
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSD ++DQ DS+AN++D SL+G D MGFG +PTESERSLMERVRQELKHELKQGYKEK+
Sbjct: 226 MSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKL 283
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
+DIREEILRKRRAGKLPGDTTS LK+WWQSH+KWPYPTEEDKARLVQETGLQLKQINNWF
Sbjct: 284 IDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWF 343
Query: 415 INQRKRNWHSNPSTSTVLKSKRK 437
INQRKRNWHSNPS+ST +K+KRK
Sbjct: 344 INQRKRNWHSNPSSSTSVKTKRK 366
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/397 (63%), Positives = 297/397 (74%), Gaps = 19/397 (4%)
Query: 32 PQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNN--N 89
P+ HH ++S P WLN++LLR Q +Q F + + + A NN +
Sbjct: 33 PESPHHDARKS----PPTWLNTSLLRQQHSQ-----FGNASSPSSAAAAAAVAGGNNFLH 83
Query: 90 TASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNN 149
+ + S NQWLS T+++ + ND + ++ A K + ++
Sbjct: 84 LQTSNSDSSNSNQWLSPTAAA-----GGGSNGGGSGHNDELSESMNFA--KKMSQQHSGG 136
Query: 150 ASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRI 209
NN + + + +W+ + KA+IL+HPLY+QLLSAHV+CLRIATPVDQLPRI
Sbjct: 137 GEENNNNNNNNNNNNNEEENSWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRI 196
Query: 210 DAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV 269
DAQLAQSQ+VV+KYS LG GQ + DDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAV
Sbjct: 197 DAQLAQSQNVVAKYSVLGQGQPPL-DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAV 255
Query: 270 MACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTE 329
MACWE+EQSLQSLTGV+PGEGTGATMSDDD+DQ DSD N DG +GPD+MGFGPL+PTE
Sbjct: 256 MACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTE 315
Query: 330 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWP 389
SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWP
Sbjct: 316 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWP 375
Query: 390 YPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP 426
YPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP
Sbjct: 376 YPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNP 412
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/447 (56%), Positives = 304/447 (68%), Gaps = 71/447 (15%)
Query: 1 MAFHHNHL---SQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLR 57
M+F+ +HL +DLPL HFTDQ QQ PP Q+H S+ T +
Sbjct: 1 MSFNSSHLLPPQEDLPLRHFTDQSQQ-------PPPQRHFSETPSLVTAS---------- 43
Query: 58 SQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS 117
FLNL TT T +DSD + HRN
Sbjct: 44 ---------------FLNLPTTL---------TTADSDLAPP-------------HRNGD 66
Query: 118 DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYK 177
+ + D P S + +++ SE ++ N E ++ G G +W++A YK
Sbjct: 67 NSVADTNPRWLSFHSEMQNTG--EVRSEVIDGV--NADGETIL---GVVGGEDWRSASYK 119
Query: 178 AEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDK 237
A IL HP+YEQLL+AHVACLR+ATPVDQ+PRIDAQL+Q V +KYS LG +V D+K
Sbjct: 120 AAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLG----VVVDNK 175
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSD 297
ELD FM+HYV+LLCSFKEQLQ HV VHAMEA+ ACWEIEQSLQSLTGVSP E G TMSD
Sbjct: 176 ELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSD 235
Query: 298 DDED-QVDSDANLFDGSLEGPDT-MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
D++D QV+S+ N+FDGSL+G D MGFGPL+PTE ERSLMERV++ELKHELKQG+KEKIV
Sbjct: 236 DEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIV 295
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 415
DIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPTEEDKA+LVQETGLQLKQINNWFI
Sbjct: 296 DIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFI 355
Query: 416 NQRKRNWHSNPSTSTVL-KSKRKRYSK 441
NQRKRNW+SN STS+ L K+KRKR K
Sbjct: 356 NQRKRNWNSNSSTSSTLTKNKRKRTGK 382
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/264 (76%), Positives = 231/264 (87%), Gaps = 3/264 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA + +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ SA A G
Sbjct: 41 REKAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSG 100
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGAT
Sbjct: 101 GE-ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGAT 159
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+
Sbjct: 160 MSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKL 218
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
VDIREEILRKRRAGKLPGDT S+LK+WWQ+HSKWPYPTE+DKARLVQETGLQLKQINNWF
Sbjct: 219 VDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWF 278
Query: 415 INQRKRNWHSNPSTSTVLKSKRKR 438
INQRKRNWHSNP++S K+K+KR
Sbjct: 279 INQRKRNWHSNPASSGE-KTKKKR 301
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/256 (76%), Positives = 222/256 (86%), Gaps = 4/256 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +A A
Sbjct: 46 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGG 105
Query: 235 DD---KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SP EG+
Sbjct: 106 APSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGS 165
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QVDS++N+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELKHELKQGY+
Sbjct: 166 GATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYR 224
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQIN 411
EK+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPTEEDKARLVQETGLQLKQIN
Sbjct: 225 EKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQIN 284
Query: 412 NWFINQRKRNWHSNPS 427
NWFINQRKRNWHSNP+
Sbjct: 285 NWFINQRKRNWHSNPA 300
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/280 (67%), Positives = 224/280 (80%), Gaps = 9/280 (3%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG VV QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 14 GGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 73
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 74 RSYASTAVGYH--HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 131
Query: 281 SLTGVSPGEGTGATMSDDDED---QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SLTG + GEG+GATMS+D++D SD + D S G D GFGPL+PTESERSLMER
Sbjct: 132 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMER 190
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKA 397
VRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPTE+DKA
Sbjct: 191 VRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKA 250
Query: 398 RLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRK 437
+LV+ETGLQLKQINNWFINQRKRNWH+N + T LKSKRK
Sbjct: 251 KLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 290
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/269 (68%), Positives = 222/269 (82%), Gaps = 5/269 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
QN + K EI +HP+Y+QLL+AHVACLR+ATP+DQLP I+AQL+ S H++ Y++ G
Sbjct: 27 QNRQMKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFS 86
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D +ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L SLTG + GEG+
Sbjct: 87 H-HDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGS 145
Query: 292 GATMSDDDED-QVD--SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GATMS+D++D Q+D SD + D S G D GFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 146 GATMSEDEDDLQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQ 204
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLK 408
G+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPTE+DKA+LV+ETGLQLK
Sbjct: 205 GFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLK 264
Query: 409 QINNWFINQRKRNWHSNPSTSTVLKSKRK 437
QINNWFINQRKRNWH+N + T LKSKRK
Sbjct: 265 QINNWFINQRKRNWHNNSHSLTSLKSKRK 293
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 211/262 (80%), Gaps = 1/262 (0%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS
Sbjct: 114 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 173
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+D+++ D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D
Sbjct: 174 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 233
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 416
+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFIN
Sbjct: 234 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFIN 293
Query: 417 QRKRNWHSNPSTSTVLKSKRKR 438
QRKRNWH+N TST LKSKRKR
Sbjct: 294 QRKRNWHNNSQTST-LKSKRKR 314
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/88 (90%), Positives = 86/88 (97%)
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKA 397
VRQELKHELKQGY++K+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPTEEDKA
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKA 60
Query: 398 RLVQETGLQLKQINNWFINQRKRNWHSN 425
RLVQETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 RLVQETGLQLKQINNWFINQRKRNWHNN 88
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/85 (91%), Positives = 84/85 (98%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPTE+DKARLV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 401 QETGLQLKQINNWFINQRKRNWHSN 425
QETGLQLKQINNWFINQRKRNWHSN
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/85 (91%), Positives = 84/85 (98%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPTE+DKARLV
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 401 QETGLQLKQINNWFINQRKRNWHSN 425
QETGLQLKQINNWFINQRKRNWHSN
Sbjct: 61 QETGLQLKQINNWFINQRKRNWHSN 85
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 75/88 (85%), Positives = 83/88 (94%)
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKA 397
VRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTS+LK WWQ HSKWPYPTE+DKA
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKA 60
Query: 398 RLVQETGLQLKQINNWFINQRKRNWHSN 425
+LV+ETGLQLKQINNWFINQRKRNWH+N
Sbjct: 61 KLVEETGLQLKQINNWFINQRKRNWHNN 88
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 135/279 (48%), Gaps = 50/279 (17%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
+G V +GA+ V KAEI+SHP Y LL+A++ C ++ P D L ++ A A
Sbjct: 71 QGQVSPAGAEAAV-------KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQ 123
Query: 217 QHVVSKYSALGAGQGLVTDDKE-LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 275
Q + + DD + LDQFM Y +L ++E+L++ + +EA +
Sbjct: 124 QLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRV 179
Query: 276 EQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
E L SL S EGTG++ +E+Q SD
Sbjct: 180 ETQLDSLA-ESNCEGTGSS----EEEQDPSD----------------------------- 205
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEED 395
++LKH+L + Y + D+R+ ++ + GKLP + L WW+ H KWPYP+E +
Sbjct: 206 ----KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEME 261
Query: 396 KARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKS 434
K L Q TGL KQINNWFINQRKR+W P T +
Sbjct: 262 KMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAFPT 300
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 127/252 (50%), Gaps = 32/252 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + A L + + G G G + D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEV-ASLLKEIGRERRAGGGGGGAGQIGVD 98
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +KE+L + EA I+ L +L +G + T AT
Sbjct: 99 PELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATH 154
Query: 296 SDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
SD+ DEDQ + ++ D I E L + ELK L + Y
Sbjct: 155 SDEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKY 197
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQI 410
+ +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQI
Sbjct: 198 SGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQI 257
Query: 411 NNWFINQRKRNW 422
NNWFINQRKR+W
Sbjct: 258 NNWFINQRKRHW 269
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 134/248 (54%), Gaps = 31/248 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHV-VSKYSALGAGQGLVT 234
KA+I+SHP Y LL+A++ C ++ P P + A+L A +Q + + + +ALG G G T
Sbjct: 109 KAKIISHPHYSSLLAAYLDCQKVGAP----PEVSARLTAVAQDLELRQRTALG-GLGTAT 163
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ +
Sbjct: 164 E-PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLSISGRSLRNILS 218
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 219 TGSSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYL 259
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
+++E+ +K++ GKLP + L SWW+ H KWPYP+E K L + TGL LKQINNWF
Sbjct: 260 SSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWF 319
Query: 415 INQRKRNW 422
INQRKR+W
Sbjct: 320 INQRKRHW 327
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 123/246 (50%), Gaps = 27/246 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P P + A+L + V G +
Sbjct: 105 KAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTALGGLAAATE 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 161 PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 416
+++E+ +K++ GKLP + L SWW H KWPYP+E K L + TGL LKQINNWFIN
Sbjct: 258 LKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFIN 317
Query: 417 QRKRNW 422
QRKR+W
Sbjct: 318 QRKRHW 323
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 131/257 (50%), Gaps = 34/257 (13%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHV----VSKYSA 225
N+ + K++I SHPLY +LL ++ C ++ P+ ++ I ++ + HV V+ S
Sbjct: 63 NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC 121
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV 285
GA D ELD+FM Y +L +K L + EA +IE LQ+L
Sbjct: 122 FGA-------DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT- 169
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
G + +SDD V SD L + D +S++ +R +LK +
Sbjct: 170 --GPASATALSDDG--AVSSDEELREDDDIAAD----------DSQQRSNDR---DLKDQ 212
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGL 405
L + + I ++ E +K++ GKLP + L WW H+KWPYPTE DK L +ETGL
Sbjct: 213 LLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGL 272
Query: 406 QLKQINNWFINQRKRNW 422
KQINNWFINQRKR+W
Sbjct: 273 DQKQINNWFINQRKRHW 289
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 36/255 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C R+ P D + R+ Q ++ + G + + D
Sbjct: 133 KAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVA---RQEFEARQRSSGTSRE-TSKD 188
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---------VSP 287
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 189 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNNAPPLRIFSP 244
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
E + +E+Q +S G E P+ + P +R ELK+ L
Sbjct: 245 SEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLL 285
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQL 407
+ Y + +++E+ +K++ GKLP D L SWW+ H KWPYP+E +K L + TGL
Sbjct: 286 RKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQ 345
Query: 408 KQINNWFINQRKRNW 422
KQINNWFINQRKR+W
Sbjct: 346 KQINNWFINQRKRHW 360
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 27/246 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G T+
Sbjct: 105 KAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTA-VAQDLELRQR-TALGV-LGAATE- 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L +L+ +
Sbjct: 161 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 416
+++E+ +K++ GKLP D L +WW+ H KWPYP+E K L + TGL LKQINNWFIN
Sbjct: 258 LKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFIN 317
Query: 417 QRKRNW 422
QRKR+W
Sbjct: 318 QRKRHW 323
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 119/248 (47%), Gaps = 27/248 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + G + D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
ELD+FM Y +L +KE+L + EA I L SL G +P + +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPTDNSDEM 167
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ +++ DA+ D FG E L + ELK L + Y +
Sbjct: 168 VGSSEDEPCSGDADAAD----------FG----QEHSSRLAD---HELKEMLLKKYSGCL 210
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
+R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQINNWF
Sbjct: 211 SRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWF 270
Query: 415 INQRKRNW 422
INQRKR+W
Sbjct: 271 INQRKRHW 278
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 119/248 (47%), Gaps = 27/248 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + G + D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
ELD+FM Y +L +KE+L + EA I L SL G +P + +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPTDNSDEM 167
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ +++ DA+ D FG E L + ELK L + Y +
Sbjct: 168 VGSSEDEPCSGDADAAD----------FG----QEHSSRLAD---HELKEMLLKKYSGCL 210
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
+R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL TGL KQINNWF
Sbjct: 211 SRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWF 270
Query: 415 INQRKRNW 422
INQRKR+W
Sbjct: 271 INQRKRHW 278
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 130/255 (50%), Gaps = 36/255 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y L+ A++ C R+ P D +PR+ Q ++ + G + + D
Sbjct: 134 KAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVA---RQEFEARQRSSGTSRE-TSKD 189
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---------VSP 287
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 190 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNNAPPLRIFSP 245
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
E + +++Q +S G E P+ + P +R ELK+ L
Sbjct: 246 SEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLL 286
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQL 407
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+E +K L + TGL
Sbjct: 287 RKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQ 346
Query: 408 KQINNWFINQRKRNW 422
KQINNWFINQRKR+W
Sbjct: 347 KQINNWFINQRKRHW 361
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 40/256 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL----AQSQHVVSKYSALGAGQGL 232
KA+I++HP Y LL A++ C +I P D + RI A A+ Q SA
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSA------- 187
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP----- 287
+ D ELDQFM Y +L ++E+L + ++ AME + IE L S+ SP
Sbjct: 188 SSRDPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQL-SMLCQSPIHILN 242
Query: 288 -GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
+G M DE+Q ++ G E P+ + P +R ELK+ L
Sbjct: 243 NPDGKSDNMGSSDEEQENNSG----GETELPE------IDPRAEDR--------ELKNHL 284
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQ 406
+ Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+E +K L + TGL
Sbjct: 285 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLD 344
Query: 407 LKQINNWFINQRKRNW 422
KQINNWFINQRKR+W
Sbjct: 345 QKQINNWFINQRKRHW 360
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 32/248 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P + + R++ A + + +A AG + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAA--AGSSCIGED 182
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + ++ EA++ IE ++LT S G
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDFASNEGGD 238
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E+ VD N+ D P +R +LK +L + Y +
Sbjct: 239 RNGSSEEDVDLH-NMID---------------PQAEDR--------DLKGQLLRKYSGYL 274
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
+++E ++KR+ GKLP + L WW H KWPYP+E K L + TGL KQINNWF
Sbjct: 275 GSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWF 334
Query: 415 INQRKRNW 422
INQRKR+W
Sbjct: 335 INQRKRHW 342
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 29/251 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ-SQHVVSKYSALGAGQGLVTD 235
KA+I+SHPLY LL A + C ++ P + + R+ A + +Y GQ +
Sbjct: 63 KAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYLQ---GQ---SS 116
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D ELD+FM Y+ +L S++++L + ++ EA +E + S T G G
Sbjct: 117 DPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGS-EGGNS 171
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
S+D+++ D + G + +E +ELK L Y +
Sbjct: 172 SEDEQEAGGGDMA----------SAGLPEITSPCAED-------KELKSHLLNKYSGYLS 214
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 415
+ E+ +K++ GKLP D L WWQ H +WPYP+E +KA L + TGL KQINNWFI
Sbjct: 215 SLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFI 274
Query: 416 NQRKRNWHSNP 426
NQRKR+W P
Sbjct: 275 NQRKRHWKPTP 285
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 39/261 (14%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA---LGAGQ 230
A KA+I+SHPLY LL A V C ++ P + + R+ + + V +YS L A Q
Sbjct: 69 AMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTD--VPQYSGDRCLPAQQ 126
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELDQFM Y +L + ++L + ++ E E+ + +
Sbjct: 127 --PAADPELDQFMETYCYMLTRYGQELARPIQ-----------EAEEFFRGI-------- 165
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
E+Q+DS A D S + D + G +P +S V + L Y
Sbjct: 166 ---------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKY 214
Query: 351 KEKIVDIREEILRKRR--AGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLK 408
+ + EI K++ G LP D L WW H +WPYP+E +KA L + TGL K
Sbjct: 215 SGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKK 274
Query: 409 QINNWFINQRKRNWHSNPSTS 429
Q+ NWFINQRKR+W P+ +
Sbjct: 275 QVTNWFINQRKRHWKPKPAAA 295
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 114/247 (46%), Gaps = 28/247 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y +LL A++ C ++ P P I L + Q Y D
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKVGAP----PEIACLLEEIQRESDVYKQEVVPSSCFGAD 141
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +K L + EA +IE L++L TGV G
Sbjct: 142 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVS--- 194
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
++ + SD L G E E R E ++LK L + + +I
Sbjct: 195 ---EDGVISSDEELSGGDHE-----------VAEDGRQRCED--RDLKDRLLRKFGSRIS 238
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 415
++ E +K++ GKLP + L WW H KWPYPTE DK L TGL KQINNWFI
Sbjct: 239 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI 298
Query: 416 NQRKRNW 422
NQRKR+W
Sbjct: 299 NQRKRHW 305
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 38/253 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGAT 294
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G T
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 295 MSDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
D + E++VD + D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQ 409
Y + +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL KQ
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQ 330
Query: 410 INNWFINQRKRNW 422
INNWFINQRKR+W
Sbjct: 331 INNWFINQRKRHW 343
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 23/252 (9%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y LL+A++ C ++ P D L R+ A + +K A AG+ D ELD
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDASAAGRH-EPRDPELD 146
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE 300
QFM Y +L ++E+L + + AME + +E L ++G +++D
Sbjct: 147 QFMEAYCNMLVKYREELTRPID-EAMEFLK---RVEAQLDCISGGGGSSSARLSLADGKS 202
Query: 301 DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
+ V S + D + D P I +E +ELK++L + Y + +R+E
Sbjct: 203 EGVGSSEDDMDPNGRENDP----PEIDPRAED-------KELKYQLLKKYSGYLSSLRQE 251
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 420
+K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFINQRKR
Sbjct: 252 FSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKR 311
Query: 421 NWHSNPSTSTVL 432
+W + V+
Sbjct: 312 HWKPSEDMPFVM 323
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 41/255 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP LL A++ C ++ P P + A+L+ + V+ D
Sbjct: 95 KAKIIAHPQCSNLLDAYMDCQKVGAP----PEVAARLSAVRQEFEARQRRSLTDRDVSKD 150
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--------- 287
ELDQFM Y +L ++E+L + ++ EA+ +IE L L G +P
Sbjct: 151 PELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMQKIEAQLNML-GNAPVRIFNSEDK 205
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G+ S++D+D + L P I +E +ELK+ L
Sbjct: 206 CEGVGS--SEEDQDNSGGETEL--------------PEIDPRAED-------RELKNHLL 242
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQL 407
+ Y + +++E+ +K++ GKLP D L +WW+ H KWPYP+E +K L + TGL
Sbjct: 243 RKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVALAESTGLDQ 302
Query: 408 KQINNWFINQRKRNW 422
KQINNWFINQRKR+W
Sbjct: 303 KQINNWFINQRKRHW 317
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 37/252 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 124 KAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGSLGED 179
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP---GEGTGA 293
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G A
Sbjct: 180 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235
Query: 294 TMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+++ E++VD + D P +R ELK +L + Y
Sbjct: 236 IERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRKY 272
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQI 410
+ +++E ++KR+ GKLP + L WW H KWPYP+E+ K L + TGL KQI
Sbjct: 273 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQI 332
Query: 411 NNWFINQRKRNW 422
NNWFINQRKR+W
Sbjct: 333 NNWFINQRKRHW 344
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 119/266 (44%), Gaps = 47/266 (17%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS----KYSALGAG 229
A KAEI+SHP Y LL+A++ C ++ P D L ++ A A Q + +
Sbjct: 79 AAMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPR 138
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
+ D +LDQFM V+ A A + Q L S+ S E
Sbjct: 139 RDDDVPDHQLDQFMH-------------ADEVQGGAGAADPGSRGVLQ-LDSIAD-SNCE 183
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTG+ S++++D +A D S ++LKH+L
Sbjct: 184 GTGS--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMK 216
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH-SKWPYPTEEDKARLVQETGLQLK 408
Y + D+R+ ++ + GKLP + L WW+ H KWPYP+E +K L Q TGL K
Sbjct: 217 YGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQK 276
Query: 409 QINNWFINQRKRNWHSNPSTSTVLKS 434
QI+NWFINQRKR+W P +
Sbjct: 277 QISNWFINQRKRHWKPTPVAGMTFPT 302
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 92 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + AME + ++ ++
Sbjct: 144 PELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSARLLLA 202
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D + V S + D S + P I +E +ELK +L + Y +
Sbjct: 203 DGKSECVGSSEDDMDPSGRENEP----PEIDPRAED-------KELKFQLLKKYSGYLSS 251
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 416
+R+E +K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFIN
Sbjct: 252 LRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFIN 311
Query: 417 QRKRNWHSNPSTSTVL 432
QRKR+W + V+
Sbjct: 312 QRKRHWKPSEDMPFVM 327
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 125/256 (48%), Gaps = 20/256 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 92 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + AME + ++ ++
Sbjct: 144 PELDQFMEAYCNMLAKYREELTRPID-EAMEFLKRVESQLDTIAGGAHGGGAGSARLLLA 202
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D + V S + D S + P I +E +ELK +L + Y +
Sbjct: 203 DGKSECVGSSEDDMDPSGRENEP----PEIDPRAED-------KELKFQLLKKYSGYLSS 251
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 416
+R+E +K++ GKLP + L WW+ H KWPYP+E +K L + TGL KQINNWFIN
Sbjct: 252 LRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFIN 311
Query: 417 QRKRNWHSNPSTSTVL 432
QRKR+W + V+
Sbjct: 312 QRKRHWKPSEDMPFVM 327
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 127/250 (50%), Gaps = 40/250 (16%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LL+A++ C +I P + + R++ A S + S+ G G + +D LD
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGI--IGEDPALD 158
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--------GEGTG 292
QFM Y +L ++++L + + EA++ IE ++LT ++P GE
Sbjct: 159 QFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMD 213
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
S D+E VD + + D P +R ELK +L + Y
Sbjct: 214 RNGSSDEE--VDVNNSFID---------------PQAEDR--------ELKGQLLRKYSG 248
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINN 412
+ +++E ++KR+ GKLP + L WW H KWPYP+E K L + TGL KQINN
Sbjct: 249 YLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINN 308
Query: 413 WFINQRKRNW 422
WFINQRKR+W
Sbjct: 309 WFINQRKRHW 318
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
+LK+ L Y + + E+ RK++ GKLP D L WWQ H +WPYP+E +KA L
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALA 63
Query: 401 QETGLQLKQINNWFINQRKRNW 422
+ TGL+ KQINNWFINQRKR+W
Sbjct: 64 ESTGLEAKQINNWFINQRKRHW 85
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 57/83 (68%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARL 399
+ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL
Sbjct: 3 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRL 62
Query: 400 VQETGLQLKQINNWFINQRKRNW 422
TGL KQINNWFINQRKR+W
Sbjct: 63 AAATGLDPKQINNWFINQRKRHW 85
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 57/82 (69%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
ELK L + Y + +R E L+KR+ GKLP D +VL WW +H +WPYPTEEDK RL
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60
Query: 401 QETGLQLKQINNWFINQRKRNW 422
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 56/82 (68%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPTEEDK RL
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60
Query: 401 QETGLQLKQINNWFINQRKRNW 422
TGL KQINNWFINQRKR+W
Sbjct: 61 AMTGLDPKQINNWFINQRKRHW 82
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 126/252 (50%), Gaps = 23/252 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS------LTGVSPGEG 290
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESK 188
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
G SDDDE + S + +E + G + P +++L K L + Y
Sbjct: 189 AGLDSSDDDEHEDGSGMEM----MEAAEDEDLGIIDPRSDDKAL--------KRHLLRKY 236
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQI 410
+ +R+E+ +KR+ GKLP + L +WW+ H +WP P+E +K L + TGL+ KQI
Sbjct: 237 SGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQI 296
Query: 411 NNWFINQRKRNW 422
NN FINQRKR+W
Sbjct: 297 NNCFINQRKRHW 308
>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
PE=2 SV=1
Length = 88
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARL 399
+ELK +L + Y + ++R+E+ +KR+ KLP + L SWW+ H +WPYP+E +K L
Sbjct: 3 KELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIAL 62
Query: 400 VQETGLQLKQINNWFINQRKRNW 422
+ TGL+ KQINNWFINQRKR+W
Sbjct: 63 AESTGLEQKQINNWFINQRKRHW 85
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWF 414
V I+++++ GKLPG+ TS+LK W H+ PYPTEE+K L T L QINNWF
Sbjct: 551 VPFTGSIVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWF 610
Query: 415 INQRKR 420
N R+R
Sbjct: 611 TNARRR 616
>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
PE=2 SV=1
Length = 85
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
ELKH+L + Y + +R+E ++++ GKLP + L WW+ H KWPYP+E +K L
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60
Query: 401 QETGLQLKQINNWFINQRKRNW 422
+ TGL KQINNWFINQRKR+W
Sbjct: 61 ETTGLDPKQINNWFINQRKRHW 82
>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
PE=2 SV=1
Length = 85
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLV 400
ELK++L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+E +K L
Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60
Query: 401 QETGLQLKQINNWFINQRKRNW 422
+ TGL KQINNWFINQRKR+W
Sbjct: 61 EATGLDQKQINNWFINQRKRHW 82
>sp|A8K0S8|ME3L2_HUMAN Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2
PE=2 SV=1
Length = 358
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 415
D+ +E R ++ G P T+++++W H PYP+EE K +LVQ+TGL + Q+NNWFI
Sbjct: 238 DLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFI 297
Query: 416 NQRKR 420
N R+R
Sbjct: 298 NARRR 302
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 415
D+ +E R ++ G P T+++++W H PYP+EE K +L Q+TGL + Q+NNWFI
Sbjct: 255 DLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 314
Query: 416 NQRKR 420
N R+R
Sbjct: 315 NARRR 319
>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
PE=5 SV=2
Length = 274
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFI 415
D+ +E R ++ G P T+++++W H PYP+EE K +L Q+TGL + Q+NNWFI
Sbjct: 154 DLDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFI 213
Query: 416 NQRKR 420
N R+R
Sbjct: 214 NARRR 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,361,057
Number of Sequences: 539616
Number of extensions: 7251937
Number of successful extensions: 115854
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 690
Number of HSP's that attempted gapping in prelim test: 43986
Number of HSP's gapped (non-prelim): 32582
length of query: 441
length of database: 191,569,459
effective HSP length: 121
effective length of query: 320
effective length of database: 126,275,923
effective search space: 40408295360
effective search space used: 40408295360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)