Query 013513
Match_columns 441
No_of_seqs 180 out of 1467
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:36:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013513.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013513hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10879 proline aminopeptidas 100.0 9.9E-76 2.2E-80 591.9 45.0 414 10-423 1-434 (438)
2 KOG2414 Putative Xaa-Pro amino 100.0 1.4E-73 3E-78 534.7 34.2 424 1-424 53-487 (488)
3 TIGR02993 ectoine_eutD ectoine 100.0 7.5E-66 1.6E-70 515.0 34.7 367 8-416 4-389 (391)
4 COG0006 PepP Xaa-Pro aminopept 100.0 4.5E-64 9.8E-69 502.6 36.3 371 8-417 3-383 (384)
5 PRK09795 aminopeptidase; Provi 100.0 6.3E-64 1.4E-68 497.3 34.8 349 17-415 2-356 (361)
6 PRK14575 putative peptidase; P 100.0 2.9E-62 6.3E-67 490.6 37.5 355 18-415 12-403 (406)
7 PRK14576 putative endopeptidas 100.0 2.3E-60 5E-65 476.7 39.2 360 15-415 9-402 (405)
8 PRK13607 proline dipeptidase; 100.0 1.1E-59 2.4E-64 473.8 37.4 362 32-408 31-438 (443)
9 KOG2737 Putative metallopeptid 100.0 6.1E-60 1.3E-64 438.3 20.5 409 10-426 12-483 (492)
10 PRK15173 peptidase; Provisiona 100.0 5.5E-55 1.2E-59 424.8 33.4 275 115-416 43-321 (323)
11 PRK12897 methionine aminopepti 100.0 1.3E-49 2.9E-54 374.5 26.5 226 168-408 3-247 (248)
12 PRK07281 methionine aminopepti 100.0 3.3E-49 7.3E-54 375.4 26.5 231 167-413 2-283 (286)
13 PRK12318 methionine aminopepti 100.0 1E-48 2.2E-53 374.5 26.9 234 163-412 36-291 (291)
14 PLN03158 methionine aminopepti 100.0 5.6E-48 1.2E-52 380.3 27.8 240 162-416 130-388 (396)
15 TIGR00500 met_pdase_I methioni 100.0 6.3E-48 1.4E-52 363.7 26.9 226 168-408 2-246 (247)
16 cd01087 Prolidase Prolidase. E 100.0 9.3E-48 2E-52 361.6 27.0 233 175-408 1-243 (243)
17 PRK05716 methionine aminopepti 100.0 1.3E-47 2.9E-52 362.7 27.2 231 167-413 3-252 (252)
18 cd01090 Creatinase Creatine am 100.0 2.6E-47 5.7E-52 353.7 26.3 215 175-408 1-228 (228)
19 PRK12896 methionine aminopepti 100.0 2.3E-46 5E-51 354.8 26.5 229 165-408 6-254 (255)
20 cd01092 APP-like Similar to Pr 100.0 5.5E-44 1.2E-48 328.3 26.4 206 175-403 1-208 (208)
21 cd01086 MetAP1 Methionine Amin 100.0 1.1E-43 2.3E-48 333.1 26.0 219 175-408 1-238 (238)
22 cd01091 CDC68-like Related to 100.0 5.1E-44 1.1E-48 333.6 23.1 221 175-408 1-243 (243)
23 PF00557 Peptidase_M24: Metall 100.0 1.6E-41 3.5E-46 311.7 21.5 201 176-400 1-207 (207)
24 cd01085 APP X-Prolyl Aminopept 100.0 5.9E-41 1.3E-45 309.7 25.1 204 176-405 5-221 (224)
25 cd01066 APP_MetAP A family inc 100.0 2E-39 4.4E-44 297.0 25.4 205 175-403 1-207 (207)
26 KOG2738 Putative methionine am 100.0 2.4E-39 5.3E-44 292.4 21.9 232 167-413 114-364 (369)
27 cd01089 PA2G4-like Related to 100.0 8.1E-39 1.8E-43 297.5 23.3 209 175-408 1-228 (228)
28 COG0024 Map Methionine aminope 100.0 1.2E-37 2.6E-42 285.7 27.1 226 168-408 4-251 (255)
29 PTZ00053 methionine aminopepti 100.0 3E-34 6.6E-39 284.9 27.0 198 166-375 149-361 (470)
30 PRK08671 methionine aminopepti 100.0 5.3E-34 1.2E-38 273.6 26.2 181 174-375 1-190 (291)
31 TIGR00495 crvDNA_42K 42K curve 100.0 3.3E-33 7.1E-38 276.4 28.8 242 167-426 11-364 (389)
32 TIGR00501 met_pdase_II methion 100.0 1.9E-33 4.2E-38 269.9 25.3 182 172-374 2-192 (295)
33 cd01088 MetAP2 Methionine Amin 100.0 8E-33 1.7E-37 265.5 25.1 179 175-374 1-188 (291)
34 KOG1189 Global transcriptional 100.0 2.4E-33 5.2E-38 280.0 19.4 351 51-426 15-394 (960)
35 KOG2413 Xaa-Pro aminopeptidase 100.0 1.1E-29 2.3E-34 251.2 19.2 357 10-424 169-566 (606)
36 COG5406 Nucleosome binding fac 99.9 1.8E-24 4E-29 212.6 18.1 388 9-426 5-434 (1001)
37 PF05195 AMP_N: Aminopeptidase 99.6 4.7E-17 1E-21 137.8 3.0 125 10-134 1-127 (134)
38 KOG2775 Metallopeptidase [Gene 99.5 5.6E-13 1.2E-17 121.8 15.9 190 171-371 81-284 (397)
39 KOG2776 Metallopeptidase [Gene 99.4 7.4E-12 1.6E-16 117.5 14.9 147 168-317 14-179 (398)
40 PF01321 Creatinase_N: Creatin 99.3 9.1E-13 2E-17 111.5 2.7 128 18-169 1-132 (132)
41 PF14826 FACT-Spt16_Nlob: FACT 97.6 7.4E-05 1.6E-09 65.3 4.3 71 10-86 1-80 (163)
42 cd01086 MetAP1 Methionine Amin 97.4 0.0028 6.1E-08 59.2 12.6 104 278-400 2-105 (238)
43 PLN03158 methionine aminopepti 97.3 0.0021 4.5E-08 64.4 11.4 120 261-400 126-247 (396)
44 PRK05716 methionine aminopepti 97.0 0.011 2.3E-07 55.8 12.0 103 279-400 13-115 (252)
45 KOG2738 Putative methionine am 97.0 0.0058 1.3E-07 57.0 9.6 100 280-400 125-226 (369)
46 PRK12896 methionine aminopepti 96.7 0.016 3.5E-07 54.7 11.3 115 266-400 4-120 (255)
47 cd01088 MetAP2 Methionine Amin 96.6 0.023 5.1E-07 54.7 11.8 99 278-400 2-100 (291)
48 cd01066 APP_MetAP A family inc 96.2 0.07 1.5E-06 48.0 11.9 95 176-272 102-202 (207)
49 COG0024 Map Methionine aminope 96.1 0.083 1.8E-06 49.4 11.5 97 279-400 13-116 (255)
50 PTZ00053 methionine aminopepti 95.6 0.19 4.2E-06 51.2 12.6 101 280-399 161-262 (470)
51 TIGR00501 met_pdase_II methion 95.6 0.19 4.1E-06 48.6 12.1 96 279-400 7-104 (295)
52 cd01092 APP-like Similar to Pr 95.6 0.2 4.3E-06 45.4 11.7 94 177-272 104-203 (208)
53 TIGR00495 crvDNA_42K 42K curve 95.5 0.19 4.2E-06 50.4 12.4 104 280-401 22-131 (389)
54 PRK08671 methionine aminopepti 95.5 0.22 4.8E-06 48.0 12.2 97 279-399 4-100 (291)
55 cd01090 Creatinase Creatine am 95.3 0.22 4.7E-06 46.2 11.2 94 178-272 111-218 (228)
56 cd01089 PA2G4-like Related to 95.3 0.31 6.7E-06 45.1 12.2 105 279-401 3-113 (228)
57 PRK12897 methionine aminopepti 94.8 0.52 1.1E-05 44.2 12.5 101 280-399 13-113 (248)
58 TIGR00500 met_pdase_I methioni 94.8 0.49 1.1E-05 44.3 12.1 101 280-400 12-113 (247)
59 PF00557 Peptidase_M24: Metall 94.7 0.3 6.5E-06 44.3 10.3 98 278-399 1-99 (207)
60 cd01091 CDC68-like Related to 94.5 0.28 6.2E-06 45.9 9.8 96 177-272 120-232 (243)
61 PRK12318 methionine aminopepti 94.2 0.53 1.2E-05 45.4 11.1 82 177-260 159-247 (291)
62 TIGR02993 ectoine_eutD ectoine 94.0 0.64 1.4E-05 46.8 11.6 95 177-272 271-372 (391)
63 cd01087 Prolidase Prolidase. E 93.7 0.95 2.1E-05 42.2 11.6 96 279-399 3-98 (243)
64 KOG2775 Metallopeptidase [Gene 93.3 0.66 1.4E-05 43.7 9.3 88 278-378 86-178 (397)
65 PRK09795 aminopeptidase; Provi 93.2 1.3 2.8E-05 44.1 12.2 99 172-272 236-340 (361)
66 PRK15173 peptidase; Provisiona 93.0 1.2 2.7E-05 43.5 11.5 94 177-272 203-304 (323)
67 PRK07281 methionine aminopepti 92.8 0.99 2.1E-05 43.4 10.3 79 178-259 150-237 (286)
68 PRK14575 putative peptidase; P 92.5 1.4 3.1E-05 44.6 11.6 94 177-272 286-387 (406)
69 PRK14576 putative endopeptidas 92.4 1.6 3.4E-05 44.3 11.7 94 177-272 285-386 (405)
70 COG0006 PepP Xaa-Pro aminopept 90.3 2.7 5.9E-05 42.2 11.0 94 178-272 264-365 (384)
71 cd01085 APP X-Prolyl Aminopept 88.4 4 8.6E-05 37.7 9.7 100 278-399 4-107 (224)
72 KOG2413 Xaa-Pro aminopeptidase 86.2 1.7 3.8E-05 45.0 6.3 119 18-151 11-132 (606)
73 KOG2776 Metallopeptidase [Gene 83.8 9.6 0.00021 37.1 9.7 109 281-407 25-139 (398)
74 PRK10879 proline aminopeptidas 81.4 22 0.00048 36.4 12.2 94 281-398 183-276 (438)
75 PRK13607 proline dipeptidase; 66.5 33 0.00072 35.2 9.0 35 179-213 271-305 (443)
76 COG5406 Nucleosome binding fac 53.4 43 0.00093 35.3 6.9 70 187-256 309-384 (1001)
77 KOG1189 Global transcriptional 48.7 97 0.0021 33.6 8.7 95 178-273 259-367 (960)
78 PF07305 DUF1454: Protein of u 47.1 1.3E+02 0.0029 26.7 8.0 41 277-317 114-154 (200)
79 PF09851 SHOCT: Short C-termin 26.7 54 0.0012 19.8 1.8 15 9-23 16-30 (31)
80 cd04896 ACT_ACR-like_3 ACT dom 24.1 63 0.0014 24.1 2.1 31 388-421 38-68 (75)
81 PF02569 Pantoate_ligase: Pant 23.9 1.1E+02 0.0024 29.2 4.2 97 187-316 131-233 (280)
82 PF00254 FKBP_C: FKBP-type pep 23.6 2E+02 0.0044 21.8 5.1 52 242-303 2-60 (94)
83 PF05184 SapB_1: Saposin-like 23.2 1.7E+02 0.0038 18.0 3.9 32 182-213 4-35 (39)
84 COG0362 Gnd 6-phosphogluconate 23.1 33 0.00071 34.3 0.5 75 226-306 97-171 (473)
85 PHA02447 hypothetical protein 22.3 39 0.00085 24.2 0.6 28 55-82 9-37 (86)
No 1
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=9.9e-76 Score=591.86 Aligned_cols=414 Identities=35% Similarity=0.625 Sum_probs=369.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCCCeEEEEEcCC----ceEEEccCCC
Q 013513 10 ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHEC----GLCMFMPETS 85 (441)
Q Consensus 10 ~~~~e~~~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~~~lvv~~~~----~~~l~~~~~~ 85 (441)
++.++|..|+++|.+.|.+.++.++.+++..++++|..|+|+|++||+||||+..|++++|+.+++ ..+||+|+.+
T Consensus 1 ~~~~~~~~rR~~l~~~~~~~~~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~~~~Lf~~~~d 80 (438)
T PRK10879 1 MTQQEFQRRRQALLAKMQPGSAALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRD 80 (438)
T ss_pred CChHHHHHHHHHHHhhCCCCcEEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCCeEEEEeCCCC
Confidence 467899999999999999988999999999999999999999999999999999999998885533 3789999999
Q ss_pred cccccccccccCcccccccccCCcCCchhHHHHHHHHhhccCCceeeccccc----ccchhHHHHHHhh-----ccCCce
Q 013513 86 AHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETA----VQTYTNLEAFQKA-----DFYGAV 156 (441)
Q Consensus 86 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igv~~~~~----~~~~~~~~~l~~~-----~~~~~~ 156 (441)
...+.|.+.+.+.+.+...++++.+.+++++.+.|.+++.+...+..+.... ......++.++.. .+...+
T Consensus 81 ~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (438)
T PRK10879 81 LTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSRQNLTAPATL 160 (438)
T ss_pred CCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhccccCCcccc
Confidence 9999999999999999989999999999999999998876555566543321 1112223333322 234578
Q ss_pred eehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCcc
Q 013513 157 RNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVI 236 (441)
Q Consensus 157 ~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~ 236 (441)
+|+.+++.++|+|||++||++||+|+++++.++..+++.++||+||.||++.+.+.+.+.|+...+|+++|++|.|++.+
T Consensus 161 ~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~~~~~iv~~G~na~~~ 240 (438)
T PRK10879 161 TDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYPSYNTIVGSGENGCIL 240 (438)
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCcEEEEcCccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred CccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHH
Q 013513 237 HYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLR 316 (441)
Q Consensus 237 h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~ 316 (441)
|+.|++++|++||+|++|+|+.++||++|+||||+++|+++++|+++|++++++++++++++|||+++++|+.++.+++.
T Consensus 241 H~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~ 320 (438)
T PRK10879 241 HYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMV 320 (438)
T ss_pred cCCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccCCCC-----CCCCCCCCCCccccCCCccccCCCCC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceee
Q 013513 317 KGLKEIGIVNSDGT-----DPYNELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIG 389 (441)
Q Consensus 317 ~~~~~~G~~~~~~~-----~~~~~~~~~~~Gh~iGl~~~e~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g 389 (441)
+.|.++|+.....+ .++..+++|++||++|+++||.|.+. ++.+|+|||||+||||+|++....++++|+++|
T Consensus 321 ~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~G 400 (438)
T PRK10879 321 SGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIG 400 (438)
T ss_pred HHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccE
Confidence 99999998753211 16788999999999999999998764 468999999999999999987666788888899
Q ss_pred EEEeEeEEEcCCCccccCCCCCCCHHHHHHHHcC
Q 013513 390 IRIEDEVLITETGYEVLTGSLPKEIKHIESLLNN 423 (441)
Q Consensus 390 ~~~ed~vlVte~G~e~Lt~~~p~~~~~i~~~~~~ 423 (441)
+|+||+|+||++|+|+||..+|+++.+||++|+.
T Consensus 401 iRiED~VlVT~~G~e~LT~~~pk~~~~iE~~m~~ 434 (438)
T PRK10879 401 IRIEDDIVITETGNENLTASVVKKPDEIEALMAA 434 (438)
T ss_pred EEeccEEEECCCcCeEcCccCCCCHHHHHHHHHh
Confidence 9999999999999999998899999999999964
No 2
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-73 Score=534.69 Aligned_cols=424 Identities=47% Similarity=0.830 Sum_probs=380.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCCCeEEEEEc--CC--c
Q 013513 1 MKEGEITPGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSH--EC--G 76 (441)
Q Consensus 1 ~~~~~~~~~~~~~e~~~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~~~lvv~~--~~--~ 76 (441)
|++||++|.|++.||..|+.||.+.+.++.+.++.+++..|..++++|.|+|++||+||||+..|++++++.. +. .
T Consensus 53 i~pgEltPgis~~Ey~~RR~rl~~ll~~~a~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~ 132 (488)
T KOG2414|consen 53 IQPGELTPGISATEYKERRSRLMSLLPANAMVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVA 132 (488)
T ss_pred cCCCCcCCCccHHHHHHHHHHHHHhCCcccEEEEccCchhhhcCccceeeecCCCeEEEeccCCCCeeEEEeecccccce
Confidence 6799999999999999999999999999999999999999999999999999999999999999999988864 22 3
Q ss_pred eEEEccCCCcccccccccccCcccccccccCCcCCchhHHHHHHHHhhccCCceeecccc--cccchhHHHHHHhhc-cC
Q 013513 77 LCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQET--AVQTYTNLEAFQKAD-FY 153 (441)
Q Consensus 77 ~~l~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igv~~~~--~~~~~~~~~~l~~~~-~~ 153 (441)
..+|+|..+...+.|++.|.+.+.+...++++...+...+..+|.+.......|..+.-. ....+.....|.... .+
T Consensus 133 ~~lf~p~kdP~~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ss~a~s~~~~~~dl~~~~~~~ 212 (488)
T KOG2414|consen 133 YDLFMPPKDPTAELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKASSKASSALKNMQDLLGFQSKS 212 (488)
T ss_pred eeEecCCCCccHHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhccchhhhHHHHHHhhhhhcccC
Confidence 678999999988899999999887777888888889999999888876434445444321 111122223333322 23
Q ss_pred CceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCC
Q 013513 154 GAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNA 233 (441)
Q Consensus 154 ~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~ 233 (441)
..++.++.+|.++|.||||.|+++||+||.|+.+++-..+-.-+++..|..+.+.+++.++.+|++..+|+|+|++|.|+
T Consensus 213 ~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~~AYpPVVAgG~na 292 (488)
T KOG2414|consen 213 STVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADRLAYPPVVAGGKNA 292 (488)
T ss_pred cccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccccccCCeeecCccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCC--CCChHHHHHHH
Q 013513 234 AVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMP--GTSLLQIHHYS 311 (441)
Q Consensus 234 ~~~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rp--G~~~~~v~~a~ 311 (441)
...||..++..++++|+|++|.|+.++||++|+||||++.|++++.|+++|++++..++..+..++| |.++.+|+...
T Consensus 293 ~tIHY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s 372 (488)
T KOG2414|consen 293 NTIHYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERS 372 (488)
T ss_pred ceEEEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHhcCcccCCCCC--CCCCCCCCCccccCCCccccCCCCCCCCCcCCCcEEEeCcceeeCCCCCCCCccceee
Q 013513 312 VGMLRKGLKEIGIVNSDGTD--PYNELNPTSIGHYLGMDVHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIG 389 (441)
Q Consensus 312 ~~~~~~~~~~~G~~~~~~~~--~~~~~~~~~~Gh~iGl~~~e~p~~~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g 389 (441)
...+.+.|.+.|+.....++ ....++||++||.+||++|+-|.++.+.+|+|||||+||||+|+|..++||++|+|.|
T Consensus 373 ~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIG 452 (488)
T KOG2414|consen 373 NELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSRDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIG 452 (488)
T ss_pred HHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCCCccCCCCceEEecCceecCccCCCchHhcCce
Confidence 99999999999976543110 2456899999999999999999999999999999999999999999989999999999
Q ss_pred EEEeEeEEEcCCCccccCCCCCCCHHHHHHHHcCC
Q 013513 390 IRIEDEVLITETGYEVLTGSLPKEIKHIESLLNNF 424 (441)
Q Consensus 390 ~~~ed~vlVte~G~e~Lt~~~p~~~~~i~~~~~~~ 424 (441)
+||||.|+|+|+|+++||..+|+++.+||.+|++.
T Consensus 453 iRIEDDV~i~edg~evLT~a~pKei~~ie~l~~~~ 487 (488)
T KOG2414|consen 453 IRIEDDVAIGEDGPEVLTAACPKEIIEIERLMKQA 487 (488)
T ss_pred EEeecceEeccCCceeehhcccCCHHHHHHHHhcc
Confidence 99999999999999999998999999999999875
No 3
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=7.5e-66 Score=514.95 Aligned_cols=367 Identities=19% Similarity=0.232 Sum_probs=302.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCCC----eEEEEEcCCceEEEccC
Q 013513 8 PGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPG----GVAVLSHECGLCMFMPE 83 (441)
Q Consensus 8 ~~~~~~e~~~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~----~~lvv~~~~~~~l~~~~ 83 (441)
..||.+||++|++|+|+.|+++|+|.++.. ++.|++|||||.... .+++++.+++++++++.
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~~lDalli~--------------~~~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~ 69 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEARGIDLLIVT--------------DPSNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRG 69 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEc--------------CcccceeeccCCCCceEEEEEEEEcCCCceEEEehh
Confidence 469999999999999999999999755443 258999999998632 46788888899999887
Q ss_pred CCcccc---cccccccCcccccc-cccCCcCCchhHHHHHHHHhhccCCceeecccccccchhHHHHHHhhccCCceeeh
Q 013513 84 TSAHDV---IWKGQIAGVDAAPE-TFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNL 159 (441)
Q Consensus 84 ~~~~~~---~w~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d~ 159 (441)
.+.... .|.... ....+.. ........+++.+.+.|++.+...++||++.+...+++..+..|++.+|+.+++|+
T Consensus 70 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~~~~~~d~ 148 (391)
T TIGR02993 70 QDANGAKRTAFMDHD-NIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLPNARFVDA 148 (391)
T ss_pred hhhhhHhheeecccc-ceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCCCCEEEeh
Confidence 644221 122110 0000000 00011134566778888876555668999876545677888999999999999999
Q ss_pred HHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----cCCCCCCCCceeeeCCCCCc
Q 013513 160 SRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKM----RGAQRMAFNPVVGGGPNAAV 235 (441)
Q Consensus 160 ~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~----~G~~~~~~~~~v~~G~~~~~ 235 (441)
++++.++|+|||++||++||+|++|++++++.+.+.++||+||.||++++...... .|+....|.+++++|+|++.
T Consensus 149 ~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~~~~~~~iv~sG~~~a~ 228 (391)
T TIGR02993 149 TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGDYPAIVPLLPSGADASA 228 (391)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCCcCCcccccccCccccC
Confidence 99999999999999999999999999999999999999999999999988655332 35555567778999999999
Q ss_pred cCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHH
Q 013513 236 IHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGML 315 (441)
Q Consensus 236 ~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~ 315 (441)
+|+.|+++++++||+|++|+|+.|+||++|++||+++ |+|+++++++|+.+.++++++++++|||++++||++++++++
T Consensus 229 pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~v-G~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~ 307 (391)
T TIGR02993 229 PHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFL-GKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVL 307 (391)
T ss_pred CCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999999999999888
Q ss_pred HHHHHhcCcccCCCCCCCCCCCCCCccccCCCcccc-----CCCCC--CCCCcCCCcEEEeCcceeeCCCCCCCCcccee
Q 013513 316 RKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHD-----SSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGI 388 (441)
Q Consensus 316 ~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e-----~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~ 388 (441)
++ +|+. . .|++|||||++.|+ .|.+. ++.+|++||||++||++|+++ +
T Consensus 308 ~~----~G~~---------~--~h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L~~GMv~tvEpgiy~~~----------~ 362 (391)
T TIGR02993 308 KK----YGIH---------K--DSRTGYPIGLSYPPDWGERTMSLRPGDNTVLKPGMTFHFMTGLWMED----------W 362 (391)
T ss_pred HH----cCCc---------c--CCCceeeeccCcCCCCCCccccccCCCCceecCCCEEEEcceeEeCC----------C
Confidence 76 5432 2 38899999999874 33443 578999999999999999986 4
Q ss_pred eEEEeEeEEEcCCCccccCCCCCCCHHH
Q 013513 389 GIRIEDEVLITETGYEVLTGSLPKEIKH 416 (441)
Q Consensus 389 g~~~ed~vlVte~G~e~Lt~~~p~~~~~ 416 (441)
|+|+||+|+||++|+|+||. +|++|..
T Consensus 363 Gvried~v~VT~~G~e~Lt~-~p~~l~~ 389 (391)
T TIGR02993 363 GLEITESILITETGVECLSS-VPRKLFV 389 (391)
T ss_pred CeEEeeEEEECCCcceeccc-CCcccEe
Confidence 89999999999999999997 9999853
No 4
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-64 Score=502.58 Aligned_cols=371 Identities=31% Similarity=0.476 Sum_probs=318.2
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCC----CCeEEEEEcCCceEEEccC
Q 013513 8 PGISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQ----PGGVAVLSHECGLCMFMPE 83 (441)
Q Consensus 8 ~~~~~~e~~~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~----~~~~lvv~~~~~~~l~~~~ 83 (441)
..++..++..|+.+++..|.+++++.++.. +++|++||||+.. ....++++.++.++||++.
T Consensus 3 ~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~--------------~~~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~ 68 (384)
T COG0006 3 LRFADEEYRARLARLRELMEEAGLDALLLT--------------SPSNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRG 68 (384)
T ss_pred cccchHHHHHHHHHHHHHHHHcCCcEEEec--------------CCCceEEEeCCCCCcccceEEEEEcCCCceEEEEcc
Confidence 356678999999999999999999755443 3699999999985 2245677778789999998
Q ss_pred CCcccccccccccCcccccccccCCcCC-chhHHHHHHHHhhccCCceeecccccccchhHHHHHHhhccCCceeehHHH
Q 013513 84 TSAHDVIWKGQIAGVDAAPETFKADKAY-PMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRL 162 (441)
Q Consensus 84 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~ 162 (441)
.+.....|...... ............. +++.+.+.+.+.......+|++.....+++..+..++..+++.+++++++.
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 147 (384)
T COG0006 69 RDEEAAKETSWIKL-ENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPRAELVDASDL 147 (384)
T ss_pred hhHHHHHhhccccc-CceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCCCEEeccHHH
Confidence 77654434332210 0111111111111 456677777766444678898876545677778889998988899999999
Q ss_pred HhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCC
Q 013513 163 THELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRND 242 (441)
Q Consensus 163 i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~ 242 (441)
+.++|+|||+.||+.||+|+.+++.++.++++.++||+||.||+++++..+.+.|++..+|.++|++|+|++.+|+.|++
T Consensus 148 i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~sf~~iv~~G~n~a~pH~~~~~ 227 (384)
T COG0006 148 VDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGPSFDTIVASGENAALPHYTPSD 227 (384)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCccCcCcEEeccccccCcCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred cccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 013513 243 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 322 (441)
Q Consensus 243 ~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~ 322 (441)
+++++||+|+||+|+.|+|||+|+||||++ |+|+++|+++|+.++++++++++++|||+++++|+.++++++.+.
T Consensus 228 ~~~~~gd~vliD~G~~~~gY~sDiTRT~~~-G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~---- 302 (384)
T COG0006 228 RKLRDGDLVLIDLGGVYNGYCSDITRTFPI-GKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKA---- 302 (384)
T ss_pred ccccCCCEEEEEeeeEECCccccceeEEec-CCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhc----
Confidence 999999999999999999999999999999 899999999999999999999999999999999999999999873
Q ss_pred CcccCCCCCCCCCCCCCCccccCC--CccccCC-CCC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEE
Q 013513 323 GIVNSDGTDPYNELNPTSIGHYLG--MDVHDSS-VVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVL 397 (441)
Q Consensus 323 G~~~~~~~~~~~~~~~~~~Gh~iG--l~~~e~p-~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vl 397 (441)
++..++.|++|||+| +++||.| .+. ++.+|+|||||++|||+|.++. +|+||||+|+
T Consensus 303 ---------g~~~~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GMv~t~Epg~y~~g~---------~GirIEd~vl 364 (384)
T COG0006 303 ---------GYGLYFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGMVFSIEPGIYIPGG---------GGVRIEDTVL 364 (384)
T ss_pred ---------CCcccccCCccccCCCCcccCcCccccCCCCCccccCCcEEEeccccccCCC---------ceEEEEEEEE
Confidence 577888999999999 9999999 454 6899999999999999999998 8999999999
Q ss_pred EcCCCccccCCCCCCCHHHH
Q 013513 398 ITETGYEVLTGSLPKEIKHI 417 (441)
Q Consensus 398 Vte~G~e~Lt~~~p~~~~~i 417 (441)
||++|+|+|| ..|+++..+
T Consensus 365 Vte~G~e~LT-~~~~~~~~~ 383 (384)
T COG0006 365 VTEDGFEVLT-RVPKELLVI 383 (384)
T ss_pred EcCCCceecc-cCCcceeec
Confidence 9999999999 599987643
No 5
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=6.3e-64 Score=497.26 Aligned_cols=349 Identities=24% Similarity=0.379 Sum_probs=285.8
Q ss_pred HHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCCCeEEEEEcCCceEEEccCCCccccccccccc
Q 013513 17 SRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQIA 96 (441)
Q Consensus 17 ~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~~~lvv~~~~~~~l~~~~~~~~~~~w~~~~~ 96 (441)
.|+++|+++|+++++|.++.. ++.|++|||||....+++++++++. +||++....... .....
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~--------------~~~n~~YLTGf~g~~g~llIt~~~~-~l~td~ry~~qa--~~~~~ 64 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLS--------------SRQNKQPHLGISTGSGYVVISRESA-HILVDSRYYADV--EARAQ 64 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEEC--------------CccccccccCccCCCeEEEEECCCC-EEEcCcchHHHH--HhhCC
Confidence 589999999999999755443 2589999999998777888888764 577765322110 00000
Q ss_pred CcccccccccCCcCCchhHHHHHHHHhhccCCceeecccccccchhHHHHHHhhccCCceeehHHHHhHhhccCCHHHHH
Q 013513 97 GVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELK 176 (441)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~i~~~R~vKs~~Ei~ 176 (441)
..+. .+........+.+.+.|++. +.++||++.. .+++..+..|...+ ...+++.. +..+|+|||++||+
T Consensus 65 ~~~v---~~~~~~~~~~~~L~~~L~~~--~~~~Ig~e~~--~~s~~~~~~L~~~l-~~~~~~~~--~~~lR~iKs~~Ei~ 134 (361)
T PRK09795 65 GYQL---HLLDATNTLTTIVNQIIADE--QLQTLGFEGQ--QVSWETAHRWQSEL-NAKLVSAT--PDVLRQIKTPEEVE 134 (361)
T ss_pred CceE---EEecCCccHHHHHHHHHHhc--CCcEEEEecC--cccHHHHHHHHHhc-Cccccccc--HHHHhcCCCHHHHH
Confidence 0110 01111111123344444432 2368999764 35666677776655 34555554 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEEEe
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVG 256 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id~g 256 (441)
+||+|+++++++++.+.+.++||+||.||++.+++.+.+.|++..+|.++|++|.|++.+|+.|++++|++||+|++|+|
T Consensus 135 ~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~~f~~iv~sG~~~~~ph~~~~~~~l~~gd~v~~d~g 214 (361)
T PRK09795 135 KIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFG 214 (361)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcCCCCeEEEEeccccccCCCCCCceecCCCEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeECCeeeeeEEEeecCCC-CCHH---HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCC
Q 013513 257 CELHGYVSDMTRTWPPCGS-FSSL---EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDP 332 (441)
Q Consensus 257 ~~~~GY~~d~~Rt~~v~G~-~~~~---~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~ 332 (441)
+.|+||++|++|||+++|+ ++++ ++++|++++++++++++++|||++++||++++++++++. |
T Consensus 215 ~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~-------------g 281 (361)
T PRK09795 215 ALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEA-------------G 281 (361)
T ss_pred cccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc-------------C
Confidence 9999999999999999544 3433 789999999999999999999999999999999998873 6
Q ss_pred CCCCCCCCccccCCCccccCCCCC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCccccCCCC
Q 013513 333 YNELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGYEVLTGSL 410 (441)
Q Consensus 333 ~~~~~~~~~Gh~iGl~~~e~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~e~Lt~~~ 410 (441)
|.++|.|++|||||+++||.|.+. ++.+|++||||+|||++|.++. +|+|+||+|+||++|+|+||. +
T Consensus 282 ~~~~~~h~~GHgiGl~~he~p~i~~~~~~~l~~gmv~~iEpgiy~~~~---------~gvriEd~v~vt~~G~e~Lt~-~ 351 (361)
T PRK09795 282 YGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQ---------GGVRIEDVVLVTPQGAEVLYA-M 351 (361)
T ss_pred CCccCCCCCCccCCccccCCCCcCCCCCCCcCCCCEEEECCEEEeCCC---------CEEEEeeEEEECCCCcEeCcC-C
Confidence 778899999999999999999885 5789999999999999999987 799999999999999999997 9
Q ss_pred CCCHH
Q 013513 411 PKEIK 415 (441)
Q Consensus 411 p~~~~ 415 (441)
|+++.
T Consensus 352 ~~~l~ 356 (361)
T PRK09795 352 PKTVL 356 (361)
T ss_pred CceEE
Confidence 99874
No 6
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=2.9e-62 Score=490.63 Aligned_cols=355 Identities=20% Similarity=0.280 Sum_probs=292.8
Q ss_pred HHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCCC---------eEEEEEcC-CceE-EEccCCCc
Q 013513 18 RRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPG---------GVAVLSHE-CGLC-MFMPETSA 86 (441)
Q Consensus 18 R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~---------~~lvv~~~-~~~~-l~~~~~~~ 86 (441)
-++|+|+.|+++|+|+++..+ ++||+|||||.... +.++++.+ +.|+ +++|..+.
T Consensus 12 ~~~rlr~~m~~~glD~lvl~~--------------p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~ 77 (406)
T PRK14575 12 VSRKLRTIMERDNIDAVIVTT--------------CDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEA 77 (406)
T ss_pred HHHHHHHHHHHcCCCEEeecC--------------cchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhh
Confidence 478999999999997655442 69999999987632 34788887 4465 77777665
Q ss_pred ccccccccccCcccccccccCCcCCch------------------h----HHHHHHHHhhccCCceeecccccccchhHH
Q 013513 87 HDVIWKGQIAGVDAAPETFKADKAYPM------------------S----KIQEILPDMIGRSSKLFHNQETAVQTYTNL 144 (441)
Q Consensus 87 ~~~~w~~~~~~~~~~~~~~~~~~~~~~------------------~----~~~~~l~~~~~~~~~igv~~~~~~~~~~~~ 144 (441)
....-.......... ..+.+...++ + .+.+.|++.+...++||+|.+ .++...+
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~--~~~~~~~ 153 (406)
T PRK14575 78 ASLTLDMPNAELKTF--PVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLN--IMSNGGK 153 (406)
T ss_pred hhhcccccccccccC--CceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccC--CCCHHHH
Confidence 432100000000000 0112222222 4 445666665556789999865 3466677
Q ss_pred HHHHhhccCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCC
Q 013513 145 EAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFN 224 (441)
Q Consensus 145 ~~l~~~~~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~ 224 (441)
..|+..+|+.+++|+++++.++|+|||++||++||+|+++++++++.+++.++||+||.||++.+...+...|.....+.
T Consensus 154 ~~l~~~lp~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~~~~ 233 (406)
T PRK14575 154 RVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHFSRF 233 (406)
T ss_pred HHHHHhCCCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcCCcC
Confidence 88988999999999999999999999999999999999999999999999999999999999999988888877654444
Q ss_pred ceeeeCCCCCccCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 013513 225 PVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSL 304 (441)
Q Consensus 225 ~~v~~G~~~~~~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~ 304 (441)
+++.+|.+ ..+|+.|+++++++||+|++|+|+.|+||++|++|||++ |+|+++|+++|++++++++++++++|||+++
T Consensus 234 ~~v~~G~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~ 311 (406)
T PRK14575 234 HLISVGAD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-GEPPEITRKIYQTIRTGHEHMLSMVAPGVKM 311 (406)
T ss_pred ceEEECCC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 68888887 568999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCC--CccccCCCCC--CCCCcCCCcEEEeCcceeeCCCCC
Q 013513 305 LQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFS 380 (441)
Q Consensus 305 ~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iG--l~~~e~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~ 380 (441)
+||++++++++++ . |+.+++.|++|||+| +.+||.|.+. ++.+|++||||++||++|.++.
T Consensus 312 ~dv~~a~~~~~~~----~---------G~~~~~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GMv~tiEpgiy~~g~-- 376 (406)
T PRK14575 312 KDVFDSTMEVIKK----S---------GLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVLSLETPYYGYNL-- 376 (406)
T ss_pred HHHHHHHHHHHHH----c---------CCccccCCCCCCcccCCCCCccCCCCCCCCCCCcCCCCEEEECCeeecCCC--
Confidence 9999999999886 3 566777899999999 4889999885 5789999999999999999887
Q ss_pred CCCccceeeEEEeEeEEEcCCCccccCCCCCCCHH
Q 013513 381 GPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIK 415 (441)
Q Consensus 381 ~~~~~~~~g~~~ed~vlVte~G~e~Lt~~~p~~~~ 415 (441)
+|+++||||+||++|+|+||. +|++|.
T Consensus 377 -------gGvriEDtvlVT~~G~e~LT~-~p~~l~ 403 (406)
T PRK14575 377 -------GSIMIEDMILINKEGIEFLSK-LPRDLV 403 (406)
T ss_pred -------cEEEEEeEEEEcCCCcccCCC-CCcccc
Confidence 799999999999999999997 999875
No 7
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.3e-60 Score=476.74 Aligned_cols=360 Identities=19% Similarity=0.272 Sum_probs=290.5
Q ss_pred HHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCC------C---eEEEEEcC-Cce-EEEccC
Q 013513 15 YISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQP------G---GVAVLSHE-CGL-CMFMPE 83 (441)
Q Consensus 15 ~~~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~------~---~~lvv~~~-~~~-~l~~~~ 83 (441)
+..-.+|+|+.|+++|+|+++.. ++.||+|||||... . .+.+++.+ +.| .++++.
T Consensus 9 ~~~~~~r~r~~M~~~gldalll~--------------~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~ 74 (405)
T PRK14576 9 LEAVSRKARVVMEREGIDALVVT--------------VCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNE 74 (405)
T ss_pred HHHHHHHHHHHHHHcCCCEEEec--------------cccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEech
Confidence 44456899999999999755543 26999999999753 1 12233345 445 667766
Q ss_pred CCcccc-------------cccccccCcccccccc--c---CCcCC-chhHHHHHHHHhhccCCceeecccccccchhHH
Q 013513 84 TSAHDV-------------IWKGQIAGVDAAPETF--K---ADKAY-PMSKIQEILPDMIGRSSKLFHNQETAVQTYTNL 144 (441)
Q Consensus 84 ~~~~~~-------------~w~~~~~~~~~~~~~~--~---~~~~~-~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~ 144 (441)
.+.... .|.............. . .+... .++.+.+.|++++...++||++.+. ++...+
T Consensus 75 ~e~~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~--~~~~~~ 152 (405)
T PRK14576 75 FEAASTHFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQA--MSNGGK 152 (405)
T ss_pred hhhhhhhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCC--CCHHHH
Confidence 544321 1211100000000000 0 00000 1145667777776667899998753 455566
Q ss_pred HHHHhhccCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCC
Q 013513 145 EAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFN 224 (441)
Q Consensus 145 ~~l~~~~~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~ 224 (441)
..|...+|+.+++|+++++.++|+|||++||++||+|++++++++..+.+.++||+||.||++.++..+.+.|....++.
T Consensus 153 ~~l~~~~~~~~~vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~~~~ 232 (405)
T PRK14576 153 GVLDKVAPGLKLVDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETNFSRF 232 (405)
T ss_pred HHHHhhCCCCeEEEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcCCCC
Confidence 77888889999999999999999999999999999999999999999999999999999999999999999886544444
Q ss_pred ceeeeCCCCCccCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 013513 225 PVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSL 304 (441)
Q Consensus 225 ~~v~~G~~~~~~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~ 304 (441)
++|++|++ ..+|+.|+++++++||+|++|+|+.++||++|++|||++ |+|+++|+++|+++.++++++++++|||+++
T Consensus 233 ~~v~~G~~-~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~-G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~ 310 (405)
T PRK14576 233 NLISVGDN-FSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVL-GEPDKLTQQIYDTIRTGHEHMLSMVAPGVKL 310 (405)
T ss_pred CEEEECCc-ccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 78999999 568999999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCC--CccccCCCCC--CCCCcCCCcEEEeCcceeeCCCCC
Q 013513 305 LQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFS 380 (441)
Q Consensus 305 ~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iG--l~~~e~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~ 380 (441)
+||++++.+++.+ . |+.+++.|++|||+| +.+||.|.+. ++.+|++||||++||++|.++.
T Consensus 311 ~dv~~a~~~~~~~----~---------G~~~~~~~~~GHgiG~~l~~~e~P~i~~~~~~~Le~GMv~~vEp~~y~~g~-- 375 (405)
T PRK14576 311 KAVFDSTMAVIKT----S---------GLPHYNRGHLGHGDGVFLGLEEVPFVSTQATETFCPGMVLSLETPYYGIGV-- 375 (405)
T ss_pred HHHHHHHHHHHHH----c---------CCccccCCCCCCCCCCCCCcCcCCCcCCCCCCccCCCCEEEECCceeecCC--
Confidence 9999999999877 3 566677889999999 7889999875 5789999999999999999887
Q ss_pred CCCccceeeEEEeEeEEEcCCCccccCCCCCCCHH
Q 013513 381 GPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIK 415 (441)
Q Consensus 381 ~~~~~~~~g~~~ed~vlVte~G~e~Lt~~~p~~~~ 415 (441)
+|+++||||+||++|+|+||. +|++|.
T Consensus 376 -------ggvriEDtvlVTe~G~e~LT~-~p~~l~ 402 (405)
T PRK14576 376 -------GSIMLEDMILITDSGFEFLSK-LDRDLR 402 (405)
T ss_pred -------CEEEEeeEEEECCCccccCCC-CCcccc
Confidence 799999999999999999998 999874
No 8
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=1.1e-59 Score=473.76 Aligned_cols=362 Identities=23% Similarity=0.319 Sum_probs=280.4
Q ss_pred EEEecC-CcccccCCCCCCCCCCCceEEEcCCC-CCCeEEEEEcC-C-ceEEEccCCCcccccccccccCccc-cccccc
Q 013513 32 AILAAA-PEKMMTDVVPYPYRQDANYLYITGCQ-QPGGVAVLSHE-C-GLCMFMPETSAHDVIWKGQIAGVDA-APETFK 106 (441)
Q Consensus 32 ~~l~~~-~~~~~~~~~~~~~~~~~n~~yltG~~-~~~~~lvv~~~-~-~~~l~~~~~~~~~~~w~~~~~~~~~-~~~~~~ 106 (441)
.+|.++ +...+++|..|+|+|+++|+||||+. .|++++++..+ + ..+||.| .+ .|.+.....+. ....++
T Consensus 31 i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~l~~~-~d----~W~g~~~~~~~~~~~~~~ 105 (443)
T PRK13607 31 LLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYQP-VD----YWHNVEPLPESFWTEEVD 105 (443)
T ss_pred EEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEEEEec-Cc----cccCCCCCchHHHHHhcC
Confidence 344444 44555799999999999999999996 69999998764 3 4556665 32 49876644333 245566
Q ss_pred CCcCCchhHHHHHHHHhhccCCceeecccccccchhHHHHHHhhccCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHH
Q 013513 107 ADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGC 186 (441)
Q Consensus 107 ~~~~~~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~ 186 (441)
.+.+.+.+.+...|... +.....+....... ..+....+.....++.+.|.++|+|||++||++||+|+++++
T Consensus 106 ~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lR~iKs~~EI~~mr~A~~i~~ 178 (443)
T PRK13607 106 IKALTKADGIASLLPAD--RGNVAYIGEVPERA-----LALGFEASNINPKGVLDYLHYHRAYKTDYELACMREAQKIAV 178 (443)
T ss_pred hHhcccHHHHHHhhccC--CCceEEeccccccc-----ccccCcccccChHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 66666666666555431 11111111110000 001111123456778899999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCc-ccCCCCeEEEEEeeeECCeeee
Q 013513 187 QALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQ-KIDDGDLVLMDVGCELHGYVSD 265 (441)
Q Consensus 187 ~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~-~l~~gd~v~id~g~~~~GY~~d 265 (441)
++++.+++.++||+||.||.+.+.... ..|+...+|+++|++|.|++.+|+.++++ ++++||+|++|+|+.++||++|
T Consensus 179 ~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~~~y~~iva~G~naa~~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sD 257 (443)
T PRK13607 179 AGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDNDVPYGNIVALNEHAAVLHYTKLDHQAPAEMRSFLIDAGAEYNGYAAD 257 (443)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcCCCCCcEEEecCcceEecCCccCCCCCCCCCEEEEEeeEEECCEEec
Confidence 999999999999999999998775443 44555678999999999999999999885 6899999999999999999999
Q ss_pred eEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccC-CCC----CCC-CCCCCC
Q 013513 266 MTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNS-DGT----DPY-NELNPT 339 (441)
Q Consensus 266 ~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~-~~~----~~~-~~~~~~ 339 (441)
+||||+ |+++++++++|+++.++++++++++|||+++.||+.++++++.+.|.++|+... ..+ .++ ..+|+|
T Consensus 258 iTRTf~--g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~H 335 (443)
T PRK13607 258 ITRTYA--AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPH 335 (443)
T ss_pred ceEEEe--cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCC
Confidence 999996 678999999999999999999999999999999999999999999999999852 110 133 468999
Q ss_pred CccccCCCccccCC------------------CCCCCCCcCCCcEEEeCcceeeCCC-------------CCC--CCccc
Q 013513 340 SIGHYLGMDVHDSS------------------VVTYERPLEPGVVITIEPGIYIPLS-------------FSG--PERFR 386 (441)
Q Consensus 340 ~~Gh~iGl~~~e~p------------------~~~~~~~l~~Gmv~~iep~~~~~~~-------------~~~--~~~~~ 386 (441)
++||+|||++||.+ ++..+.+|++|||||||||+|+++. .+| .++|+
T Consensus 336 glGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~~~~in~~~i~~~~ 415 (443)
T PRK13607 336 GLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFIDSLLAPLREGPFSKHFNWQKIDALK 415 (443)
T ss_pred CccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCeeeeChhhhchhhhhhhhhhccHHHHHhhc
Confidence 99999999999984 2334689999999999999999752 011 22333
Q ss_pred e-eeEEEeEeEEEcCCCccccCC
Q 013513 387 G-IGIRIEDEVLITETGYEVLTG 408 (441)
Q Consensus 387 ~-~g~~~ed~vlVte~G~e~Lt~ 408 (441)
+ +|+||||+|+||++|+++||.
T Consensus 416 ~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 416 PFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred CCCEEeecceEEEcCCCCeECCh
Confidence 3 499999999999999999997
No 9
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=6.1e-60 Score=438.25 Aligned_cols=409 Identities=28% Similarity=0.499 Sum_probs=336.6
Q ss_pred CCHHHHHHHHHHHHHhCCCC---------c--EEEEecCCcccc-cCCCCCCCCCCCceEEEcCCCCCCeEEEEEc-CCc
Q 013513 10 ISAEEYISRRKRLLEILPEN---------S--VAILAAAPEKMM-TDVVPYPYRQDANYLYITGCQQPGGVAVLSH-ECG 76 (441)
Q Consensus 10 ~~~~e~~~R~~rl~~~m~~~---------g--l~~l~~~~~~~~-~~~~~~~~~~~~n~~yltG~~~~~~~lvv~~-~~~ 76 (441)
+|.+.|...+.|+-+.++.+ + +.++.+..+.-+ ++|..+.|+|++.|+|++|...|+++.++.- .|+
T Consensus 12 vP~~lf~~nr~rl~~~lr~k~~~~nr~~~~~s~vllqgGeE~nrYctD~~~lFrQesYF~~lfGV~ep~~yg~idv~tgK 91 (492)
T KOG2737|consen 12 VPMELFAGNRKRLLEALRKKLLSSNRSLDGGSFVLLQGGEEKNRYCTDTTELFRQESYFAYLFGVREPGFYGAIDVGTGK 91 (492)
T ss_pred ecHHHhhcchHHHHHHHHhhcccccccccCceEEEEecchhhcccccchHHHHhhhhHHHHhhcCCCccceEEEEecCCc
Confidence 56777766666665555442 2 356666655444 4688999999999999999999999988776 468
Q ss_pred eEEEccCCCcccccccccccCcccccccccCCcCCchhHHHHHHHHhhccCCceee----ccccc----ccchhHHHHHH
Q 013513 77 LCMFMPETSAHDVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFH----NQETA----VQTYTNLEAFQ 148 (441)
Q Consensus 77 ~~l~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igv----~~~~~----~~~~~~~~~l~ 148 (441)
.+||+|+.+.++..|.+...+.+.++..+.++.+-+.+++...++.. +.+.+.. +.+.. ..+|....
T Consensus 92 stLFvPrlp~~ya~W~G~i~~l~~fke~y~VDev~yvde~~~~~~~~--~~k~l~~l~g~nTDsg~v~~e~~f~g~~--- 166 (492)
T KOG2737|consen 92 STLFVPRLPDSYATWMGEILSLQHFKEKYAVDEVFYVDEIIQVLKGS--KPKLLYLLRGLNTDSGNVLKEASFAGIS--- 166 (492)
T ss_pred eEEEecCCChhhceeccccCCHHHHHHHhhhhheeehHhHHHHhhcc--CccceeeeeccccCcccccCcccccchh---
Confidence 99999999999999999999999888888899888888888877653 2232221 11111 01111111
Q ss_pred hhccCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC-CCCCCCcee
Q 013513 149 KADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGA-QRMAFNPVV 227 (441)
Q Consensus 149 ~~~~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~-~~~~~~~~v 227 (441)
.++ ....-+.+.+.++|.|||+.||+.||.|++|+++++.++++.++||+.|+++.+.+++....+|. ...+|.+|+
T Consensus 167 -kf~-~D~~~lyp~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh~sYtcIc 244 (492)
T KOG2737|consen 167 -KFE-TDLTLLYPILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRHLSYTCIC 244 (492)
T ss_pred -hcc-cCchhhhHHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccccccceee
Confidence 111 12233467889999999999999999999999999999999999999999999999999888765 778999999
Q ss_pred eeCCCCCccCc----cCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 013513 228 GGGPNAAVIHY----SRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTS 303 (441)
Q Consensus 228 ~~G~~~~~~h~----~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~ 303 (441)
+||+|+++.|| .|+++.|+.||++++|+|+.|++|.+|||++|+.+|++|++|+.+|+++++++.++++++|||+.
T Consensus 245 ~sG~ns~vLHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~ 324 (492)
T KOG2737|consen 245 ASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVW 324 (492)
T ss_pred ecCCCcceeeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCcccCCCCC-----CCCCCCCCCccccCCCccccCCCCC---------------CCCCcCC
Q 013513 304 LLQIHHYSVGMLRKGLKEIGIVNSDGTD-----PYNELNPTSIGHYLGMDVHDSSVVT---------------YERPLEP 363 (441)
Q Consensus 304 ~~~v~~a~~~~~~~~~~~~G~~~~~~~~-----~~~~~~~~~~Gh~iGl~~~e~p~~~---------------~~~~l~~ 363 (441)
+.|++..+.+++-+.|++.|+.....|+ --..+.||++||-+|+++|+--..+ -.+.|++
T Consensus 325 W~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e 404 (492)
T KOG2737|consen 325 WVDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKE 404 (492)
T ss_pred cccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhc
Confidence 9999999999999999999988766543 2355889999999999999843221 2568999
Q ss_pred CcEEEeCcceeeCCCC----------------CCCCcccee-eEEEeEeEEEcCCCccccCCCCCCCHHHHHHHHcCCCc
Q 013513 364 GVVITIEPGIYIPLSF----------------SGPERFRGI-GIRIEDEVLITETGYEVLTGSLPKEIKHIESLLNNFSS 426 (441)
Q Consensus 364 Gmv~~iep~~~~~~~~----------------~~~~~~~~~-g~~~ed~vlVte~G~e~Lt~~~p~~~~~i~~~~~~~~~ 426 (441)
|||+++|||+|+.... ...++|+++ ||||||.|+||++|+|+||. .|+.+++||++|+.-..
T Consensus 405 ~MviTvEPGcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~-vprtveeIEa~ma~g~~ 483 (492)
T KOG2737|consen 405 GMVITVEPGCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC-VPRTVEEIEACMAGGDK 483 (492)
T ss_pred CcEEEecCChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC-CCCCHHHHHHHHhcCCC
Confidence 9999999999985531 124555554 79999999999999999998 99999999999987653
No 10
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=5.5e-55 Score=424.85 Aligned_cols=275 Identities=21% Similarity=0.313 Sum_probs=245.7
Q ss_pred HHHHHHHHhhccCCceeecccccccchhHHHHHHhhccCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 013513 115 KIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTML 194 (441)
Q Consensus 115 ~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~ 194 (441)
.+.+.|++++...++||++.+ .+++..+..|++.+|+.+++|+++++.++|+|||++||+.||+|++++++++..+.+
T Consensus 43 ~l~~~l~~~g~~~~rigve~~--~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~ 120 (323)
T PRK15173 43 ILKDALNDARVLNKKIAIDLN--IMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASK 120 (323)
T ss_pred HHHHHHHHcCccCCEEEEecC--ccCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555556789999865 346777888999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCC
Q 013513 195 HSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCG 274 (441)
Q Consensus 195 ~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G 274 (441)
.++||+||.||++.+...+.+.|.....+.+++++|.+. .+|+.|+++++++||+|++|+|+.|+||++|++|||++ |
T Consensus 121 ~i~~G~tE~el~a~~~~~~~~~g~~~~~~~~~i~~G~~~-~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~v-G 198 (323)
T PRK15173 121 LIRVGCTSAELTAAYKAAVMSKSETHFSRFHLISVGADF-SPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVV-G 198 (323)
T ss_pred HccCCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECCCC-ccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEc-C
Confidence 999999999999999888888777654444678888874 67999999999999999999999999999999999999 9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCC--ccccC
Q 013513 275 SFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGM--DVHDS 352 (441)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl--~~~e~ 352 (441)
+|+++|+++|++++++++++++++|||+++++|++++++++++ . |+.+++.|++|||+|+ .+||.
T Consensus 199 ~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~----~---------G~~~~~~~~~GHGiG~~lg~~E~ 265 (323)
T PRK15173 199 EPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK----S---------GLPNYNRGHLGHGNGVFLGLEES 265 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH----c---------CCccccCCCCCCcCCCCCCcCCC
Confidence 9999999999999999999999999999999999999998876 3 5666778899999996 88999
Q ss_pred CCCC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCccccCCCCCCCHHH
Q 013513 353 SVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIKH 416 (441)
Q Consensus 353 p~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~e~Lt~~~p~~~~~ 416 (441)
|.+. ++.+|++||||++||++|.++. +|+++||||+||++|+|+||. +|++|..
T Consensus 266 P~i~~~~~~~Le~GMV~tiEPgiy~~g~---------ggvriEDtvlVTe~G~e~LT~-~p~~l~~ 321 (323)
T PRK15173 266 PFVSTHATESFTSGMVLSLETPYYGYNL---------GSIMIEDMILINKEGIEFLSK-LPRDLVS 321 (323)
T ss_pred CCCCCCCCCccCCCCEEEECCEEEcCCC---------cEEEEeeEEEEcCCcceeCCC-CCcccee
Confidence 9875 4789999999999999998876 799999999999999999997 9998753
No 11
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-49 Score=374.54 Aligned_cols=226 Identities=21% Similarity=0.259 Sum_probs=202.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCccCCC
Q 013513 168 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRND 242 (441)
Q Consensus 168 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~~~~ 242 (441)
.||||+||++||+|+++++++++.+.+.++||+||.||++.+++.+.++|++. .+|++++++|.|+..+|+.|++
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~~ 82 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPAD 82 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCCC
Confidence 79999999999999999999999999999999999999999999999999873 4677789999999999999999
Q ss_pred cccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 013513 243 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 322 (441)
Q Consensus 243 ~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~ 322 (441)
++|++||+|++|+|+.++||++|++|||++ |+|+++|+++|+++.++++++++++|||++++||+.++++++++ .
T Consensus 83 ~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~v-G~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~----~ 157 (248)
T PRK12897 83 VPLTEGDIVTIDMVVNLNGGLSDSAWTYRV-GKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVAN----E 157 (248)
T ss_pred cccCCCCEEEEEeeEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH----c
Confidence 999999999999999999999999999999 99999999999999999999999999999999999999888876 4
Q ss_pred CcccCCCCCCCCCCCCCCccccCCCccccCCCCC------CCCCcCCCcEEEeCcceeeCCCC------CCCCc--ccee
Q 013513 323 GIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLSF------SGPER--FRGI 388 (441)
Q Consensus 323 G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~------~~~~l~~Gmv~~iep~~~~~~~~------~~~~~--~~~~ 388 (441)
| +.. .+|++|||||+++||.|.+. ++.+|++||||++||++|..... +|... .+.+
T Consensus 158 g---------~~~-~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~ 227 (248)
T PRK12897 158 G---------FSV-ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKL 227 (248)
T ss_pred C---------Ccc-CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCe
Confidence 4 332 26889999999999999774 35789999999999999953321 12211 2337
Q ss_pred eEEEeEeEEEcCCCccccCC
Q 013513 389 GIRIEDEVLITETGYEVLTG 408 (441)
Q Consensus 389 g~~~ed~vlVte~G~e~Lt~ 408 (441)
|+|+||||+||++|+|+||.
T Consensus 228 g~r~edtv~Vt~~G~e~lt~ 247 (248)
T PRK12897 228 SAQYEHTIAITKDGPIILTK 247 (248)
T ss_pred EeecceEEEEeCCccEEeec
Confidence 99999999999999999996
No 12
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.3e-49 Score=375.40 Aligned_cols=231 Identities=20% Similarity=0.203 Sum_probs=205.6
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCC---------CCCCCceeeeCCCCCccC
Q 013513 167 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQ---------RMAFNPVVGGGPNAAVIH 237 (441)
Q Consensus 167 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~---------~~~~~~~v~~G~~~~~~h 237 (441)
..+||++||++||+|++|+++++.++.+.++||+||.||++.++..+.+.|+. ...|++++++|.|+..+|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 46999999999999999999999999999999999999999999999988753 256889999999999999
Q ss_pred ccCCCcccCCCCeEEEEEee---------------------------eECCeeeeeEEEeecCCCCCHHHHHHHHHHHHH
Q 013513 238 YSRNDQKIDDGDLVLMDVGC---------------------------ELHGYVSDMTRTWPPCGSFSSLEEALYDLILQT 290 (441)
Q Consensus 238 ~~~~~~~l~~gd~v~id~g~---------------------------~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~ 290 (441)
+.|++++|++||+|++|+|+ .|+||++|++|||++ |+|+++|+++|++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~v-G~~~~~~~~l~~~~~ea 160 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAV-GTPSDEVKNLMDVTKEA 160 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEEC-CCCCHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999988 99999999999999999
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCC------CCCCcCCC
Q 013513 291 NKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPG 364 (441)
Q Consensus 291 ~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~------~~~~l~~G 364 (441)
++++++.+|||++++||++++++++++ . +|.. +.|++|||||+++||.|.++ ++.+|++|
T Consensus 161 ~~~ai~~~kpG~~~~di~~a~~~~~~~----~---------G~~~-~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~G 226 (286)
T PRK07281 161 MYRGIEQAVVGNRIGDIGAAIQEYAES----R---------GYGV-VRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREG 226 (286)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHH----c---------CCcc-CCCeeeeeCCCccCCCCcCCCcccCCCCCEECCC
Confidence 999999999999999999999998876 3 4443 46899999999999999874 35789999
Q ss_pred cEEEeCcceeeCCCC---CCCCcc------ceeeEEEeEeEEEcCCCccccCCCCCCC
Q 013513 365 VVITIEPGIYIPLSF---SGPERF------RGIGIRIEDEVLITETGYEVLTGSLPKE 413 (441)
Q Consensus 365 mv~~iep~~~~~~~~---~~~~~~------~~~g~~~ed~vlVte~G~e~Lt~~~p~~ 413 (441)
|||+|||++|++... .+++.| +++|+|+||||+||++|+|+||. .+++
T Consensus 227 MV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~-~~~~ 283 (286)
T PRK07281 227 MVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTS-QGEE 283 (286)
T ss_pred CEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEeCCcceECCC-CCcc
Confidence 999999999984321 123444 56789999999999999999997 5554
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1e-48 Score=374.54 Aligned_cols=234 Identities=25% Similarity=0.358 Sum_probs=204.4
Q ss_pred HhHhhc-cCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCC-------CCCCCceeeeCCCCC
Q 013513 163 THELRW-VKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQ-------RMAFNPVVGGGPNAA 234 (441)
Q Consensus 163 i~~~R~-vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~-------~~~~~~~v~~G~~~~ 234 (441)
++++|. |||++||+.||+|++|++++++++++.++||+||.||++.++..+.+.|+. ..+|++++++|.|+.
T Consensus 36 ~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~ 115 (291)
T PRK12318 36 ASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEV 115 (291)
T ss_pred cCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccce
Confidence 344555 999999999999999999999999999999999999999888888888864 135888899999999
Q ss_pred ccCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHH
Q 013513 235 VIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGM 314 (441)
Q Consensus 235 ~~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~ 314 (441)
.+|+.|++++|++||+|++|+|+.++||++|++|||++ |+|+++|+++|+++.++++++++++|||++++||+++++++
T Consensus 116 ~~H~~p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~v-G~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~ 194 (291)
T PRK12318 116 ICHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMI-GEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENC 194 (291)
T ss_pred eecCCCCCCccCCCCEEEEEEeEEECcEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999988
Q ss_pred HHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCC-----CCCCcCCCcEEEeCcceeeCCCCCC---CCcc-
Q 013513 315 LRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT-----YERPLEPGVVITIEPGIYIPLSFSG---PERF- 385 (441)
Q Consensus 315 ~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~-----~~~~l~~Gmv~~iep~~~~~~~~~~---~~~~- 385 (441)
+++ .|+. .. .|++|||||+++||.|.+. ++.+|++||||+|||++|.++.... .+.|
T Consensus 195 ~~~----~G~~---------~~-~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~ 260 (291)
T PRK12318 195 ADK----YGFS---------VV-DQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWE 260 (291)
T ss_pred HHH----cCCc---------cC-CCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcE
Confidence 876 4443 22 4779999999999999874 3578999999999999998754211 0111
Q ss_pred -----ceeeEEEeEeEEEcCCCccccCCCCCC
Q 013513 386 -----RGIGIRIEDEVLITETGYEVLTGSLPK 412 (441)
Q Consensus 386 -----~~~g~~~ed~vlVte~G~e~Lt~~~p~ 412 (441)
+..++++||||+||++|+|+||. +|+
T Consensus 261 ~~~~~g~~~~~~edtv~VTe~G~e~LT~-~~~ 291 (291)
T PRK12318 261 ARTCDNQPSAQWEHTILITETGYEILTL-LDK 291 (291)
T ss_pred EEecCCCeeeeeeeEEEEcCCcceeCCC-CCC
Confidence 33567789999999999999997 775
No 14
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=5.6e-48 Score=380.26 Aligned_cols=240 Identities=21% Similarity=0.244 Sum_probs=214.4
Q ss_pred HHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCcc
Q 013513 162 LTHELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVI 236 (441)
Q Consensus 162 ~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~ 236 (441)
.+.+.|+|||++||+.||+|+++++++++.+.+.++||+||.||.++++..+.++|+.+ ..|+.++++|.|..++
T Consensus 130 ~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~ 209 (396)
T PLN03158 130 DLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVIC 209 (396)
T ss_pred ccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccccccc
Confidence 35577999999999999999999999999999999999999999999999999999864 3577889999999999
Q ss_pred CccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHH
Q 013513 237 HYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLR 316 (441)
Q Consensus 237 h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~ 316 (441)
|+.|++++|++||+|++|+|+.++||++|++|||+| |+++++++++|++++++++++++++|||++++||++++++++.
T Consensus 210 Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~V-G~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~ 288 (396)
T PLN03158 210 HGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFV-GNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHAT 288 (396)
T ss_pred CCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999988877
Q ss_pred HHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCC------CCCcCCCcEEEeCcceeeCCC--CCCCCcc---
Q 013513 317 KGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY------ERPLEPGVVITIEPGIYIPLS--FSGPERF--- 385 (441)
Q Consensus 317 ~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~------~~~l~~Gmv~~iep~~~~~~~--~~~~~~~--- 385 (441)
+ .|+.. ..+++|||||+.+||.|.++. ..+|++||||+|||++|.... ..|+++|
T Consensus 289 ~----~G~~~----------v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~ 354 (396)
T PLN03158 289 M----SGLSV----------VKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAV 354 (396)
T ss_pred H----cCCCc----------cCCccCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEE
Confidence 5 44432 357799999999999998862 268999999999999997332 2467777
Q ss_pred ---ceeeEEEeEeEEEcCCCccccCCCCCCCHHH
Q 013513 386 ---RGIGIRIEDEVLITETGYEVLTGSLPKEIKH 416 (441)
Q Consensus 386 ---~~~g~~~ed~vlVte~G~e~Lt~~~p~~~~~ 416 (441)
+..++++|||||||++|+|+||...|+.+..
T Consensus 355 t~dG~~~aq~E~tvlVTe~G~EiLT~~~~~~~~~ 388 (396)
T PLN03158 355 TADGKRSAQFEHTLLVTETGVEVLTARLPSSPDV 388 (396)
T ss_pred ecCCceeeEeeeEEEEeCCcceECCCCCCCCccc
Confidence 4457999999999999999999878877653
No 15
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=6.3e-48 Score=363.66 Aligned_cols=226 Identities=24% Similarity=0.296 Sum_probs=202.0
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCccCCC
Q 013513 168 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRND 242 (441)
Q Consensus 168 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~~~~ 242 (441)
+|||++||++||+|+++++++++.+.+.++||+||.||++++.+.+.+.|++. ..|++++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 79999999999999999999999999999999999999999999999999763 2466788899999999999999
Q ss_pred cccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 013513 243 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 322 (441)
Q Consensus 243 ~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~ 322 (441)
++|++||+|++|+|+.|+||++|++||+++ |+|+++|+++|+++.++++++++++|||++++||++++++++++ .
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~----~ 156 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLV-GKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEA----K 156 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----c
Confidence 999999999999999999999999999999 89999999999999999999999999999999999999888776 4
Q ss_pred CcccCCCCCCCCCCCCCCccccCCCccccCCCCC------CCCCcCCCcEEEeCcceeeCCCC------CC--CCcccee
Q 013513 323 GIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLSF------SG--PERFRGI 388 (441)
Q Consensus 323 G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~------~~~~l~~Gmv~~iep~~~~~~~~------~~--~~~~~~~ 388 (441)
|+.. ..+++|||||+.+||.|.+. ++.+|++||||++||++|.+... .| ..+++.+
T Consensus 157 g~~~----------~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~ 226 (247)
T TIGR00500 157 GFSV----------VREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSL 226 (247)
T ss_pred CCEe----------ccCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCe
Confidence 5432 24679999999999999764 36899999999999999985320 11 1233568
Q ss_pred eEEEeEeEEEcCCCccccCC
Q 013513 389 GIRIEDEVLITETGYEVLTG 408 (441)
Q Consensus 389 g~~~ed~vlVte~G~e~Lt~ 408 (441)
|+|+||||+||++|+|+||.
T Consensus 227 g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 227 SAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred EEEEeEEEEEcCCccEEccC
Confidence 99999999999999999996
No 16
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=9.3e-48 Score=361.63 Aligned_cols=233 Identities=47% Similarity=0.789 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEE
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 254 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id 254 (441)
|++||+|+++++++++.+.+.++||+||.||++.+++.+.+.|++ ..|++++++|.|+..+|+.|++++|++||+|++|
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~-~~~~~~v~~g~~~~~~H~~~~~~~l~~Gd~v~vD 79 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGAR-LAYSYIVAAGSNAAILHYVHNDQPLKDGDLVLID 79 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCC-cCCCCeEEECCCccccCCCcCCCcCCCCCEEEEE
Confidence 679999999999999999999999999999999999999999998 5788899999999999999999999999999999
Q ss_pred EeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCC----
Q 013513 255 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGT---- 330 (441)
Q Consensus 255 ~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~---- 330 (441)
+|+.|+||++|++||++++|+|+++++++|+++.++++++++++|||++++||++++++++++.+.++|+....++
T Consensus 80 ~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~ 159 (243)
T cd01087 80 AGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVE 159 (243)
T ss_pred eCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhh
Confidence 9999999999999999886799999999999999999999999999999999999999999987777777531000
Q ss_pred -CCCCCCCCCCccccCCCccccCCCC----CCCCCcCCCcEEEeCcceeeCCCC-CCCCccceeeEEEeEeEEEcCCCcc
Q 013513 331 -DPYNELNPTSIGHYLGMDVHDSSVV----TYERPLEPGVVITIEPGIYIPLSF-SGPERFRGIGIRIEDEVLITETGYE 404 (441)
Q Consensus 331 -~~~~~~~~~~~Gh~iGl~~~e~p~~----~~~~~l~~Gmv~~iep~~~~~~~~-~~~~~~~~~g~~~ed~vlVte~G~e 404 (441)
..+.++++|++|||+|+++||.|.+ .++.+|++||||++||++|+++.. ..++.++.+|+++||||+||++|+|
T Consensus 160 ~~~~~~~~~h~~GhgiGl~~~e~p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~~G~e 239 (243)
T cd01087 160 SGAYAKFFPHGLGHYLGLDVHDVGGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTEDGPE 239 (243)
T ss_pred hhhhhhhcCCCCccccCcccccCccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcCCcce
Confidence 0245789999999999999999965 257899999999999999998731 2245556689999999999999999
Q ss_pred ccCC
Q 013513 405 VLTG 408 (441)
Q Consensus 405 ~Lt~ 408 (441)
+||.
T Consensus 240 ~Lt~ 243 (243)
T cd01087 240 NLTR 243 (243)
T ss_pred eCcC
Confidence 9984
No 17
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1.3e-47 Score=362.70 Aligned_cols=231 Identities=25% Similarity=0.287 Sum_probs=205.0
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCccCC
Q 013513 167 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRN 241 (441)
Q Consensus 167 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~~~ 241 (441)
-+|||++||++||+|+++++++++++.+.++||+||.||++.+...+.+.|+.. ..|++++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 579999999999999999999999999999999999999999999999998752 356678889999999999999
Q ss_pred CcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHh
Q 013513 242 DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKE 321 (441)
Q Consensus 242 ~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~ 321 (441)
+++|++||+|++|+|+.++||++|++||+++ |+|+++|+++|++++++++++++++|||++++||++++++++++
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~---- 157 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGV-GEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEA---- 157 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999999988876
Q ss_pred cCcccCCCCCCCCCCCCCCccccCCCccccCCCCC------CCCCcCCCcEEEeCcceeeCCCC--CCCC------ccce
Q 013513 322 IGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLSF--SGPE------RFRG 387 (441)
Q Consensus 322 ~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~------~~~~l~~Gmv~~iep~~~~~~~~--~~~~------~~~~ 387 (441)
+|+.. ..+++|||||+.+||.|.+. ++.+|++||||++||++|.+... .|.+ +++.
T Consensus 158 ~g~~~----------~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~ 227 (252)
T PRK05716 158 EGFSV----------VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGS 227 (252)
T ss_pred cCCee----------ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCC
Confidence 45432 24679999999999999763 47899999999999999974321 1122 2355
Q ss_pred eeEEEeEeEEEcCCCccccCCCCCCC
Q 013513 388 IGIRIEDEVLITETGYEVLTGSLPKE 413 (441)
Q Consensus 388 ~g~~~ed~vlVte~G~e~Lt~~~p~~ 413 (441)
+|+++||||+||++|+|+||. .|++
T Consensus 228 ~g~~~ed~v~Vt~~G~e~Lt~-~~~~ 252 (252)
T PRK05716 228 LSAQYEHTVAVTEDGPEILTL-RPEE 252 (252)
T ss_pred cEEeeeeEEEEcCCccEEeeC-CCCC
Confidence 799999999999999999997 7874
No 18
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=2.6e-47 Score=353.67 Aligned_cols=215 Identities=22% Similarity=0.246 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCC------CceeeeCCCCCccCccCCCcccCCC
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAF------NPVVGGGPNAAVIHYSRNDQKIDDG 248 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~------~~~v~~G~~~~~~h~~~~~~~l~~g 248 (441)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+....+ .+++++|+|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 6799999999999999999999999999999999999999998764333 2578999999999999999999999
Q ss_pred CeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCC
Q 013513 249 DLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 328 (441)
Q Consensus 249 d~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~ 328 (441)
|+|++|+|+.++||++|++|||++ |+|+++|+++|+++.++++++++++|||++++||++++++++++ +
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~v-G~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~----~------ 149 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFL-DEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYRE----H------ 149 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH----c------
Confidence 999999999999999999999998 89999999999999999999999999999999999999999887 3
Q ss_pred CCCCCCCCCCCCccccCCCccccCCC-----CC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCC
Q 013513 329 GTDPYNELNPTSIGHYLGMDVHDSSV-----VT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 401 (441)
Q Consensus 329 ~~~~~~~~~~~~~Gh~iGl~~~e~p~-----~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~ 401 (441)
|+.+++.|++|||+|+..||.|. +. ++.+|+|||||++||++|.+.. ..+.+|+|+||+|+||++
T Consensus 150 ---G~~~~~~~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~-----~~g~gG~ried~v~Vt~~ 221 (228)
T cd01090 150 ---DLLRYRTFGYGHSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEG-----QPGAGGYREHDILVINEN 221 (228)
T ss_pred ---CCCcccccccCcccccccccCCCccccccCCCCCCccCCCCEEEECCEEeeccc-----CCCCcEEEeeeEEEECCC
Confidence 56677789999999999999762 32 4689999999999999998521 001169999999999999
Q ss_pred CccccCC
Q 013513 402 GYEVLTG 408 (441)
Q Consensus 402 G~e~Lt~ 408 (441)
|+|+||.
T Consensus 222 G~e~Lt~ 228 (228)
T cd01090 222 GAENITG 228 (228)
T ss_pred ccccCcC
Confidence 9999984
No 19
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.3e-46 Score=354.84 Aligned_cols=229 Identities=25% Similarity=0.269 Sum_probs=202.6
Q ss_pred HhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCcc
Q 013513 165 ELRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYS 239 (441)
Q Consensus 165 ~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~ 239 (441)
++++|||++||++||+|+++++++++.+.+.++||+||.||++.+...+.+.|+.. ..|++.+++|.|...+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45689999999999999999999999999999999999999999999999999873 3467778889999899999
Q ss_pred CCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHH
Q 013513 240 RNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGL 319 (441)
Q Consensus 240 ~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~ 319 (441)
|++++|++||+|++|+|+.++||++|++||+++ |+++++++++|++++++++++++++|||+++++|++++++++++
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~-- 162 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAV-GPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKK-- 162 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH--
Confidence 999999999999999999999999999999998 89999999999999999999999999999999999999888876
Q ss_pred HhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCC-------CCCCcCCCcEEEeCcceeeCCC--CCCCCc------
Q 013513 320 KEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT-------YERPLEPGVVITIEPGIYIPLS--FSGPER------ 384 (441)
Q Consensus 320 ~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~-------~~~~l~~Gmv~~iep~~~~~~~--~~~~~~------ 384 (441)
.|+. ...|.+|||||+.+||.|.+. ++.+|++||||+|||++|.... ..|.+.
T Consensus 163 --~G~~----------~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~ 230 (255)
T PRK12896 163 --NGYS----------VVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTP 230 (255)
T ss_pred --cCCE----------eccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEec
Confidence 4432 235789999999999999532 3679999999999999986322 122333
Q ss_pred cceeeEEEeEeEEEcCCCccccCC
Q 013513 385 FRGIGIRIEDEVLITETGYEVLTG 408 (441)
Q Consensus 385 ~~~~g~~~ed~vlVte~G~e~Lt~ 408 (441)
.+.+|+++||||+||++|+|+||+
T Consensus 231 ~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 231 DKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred CCCeEEEEEEEEEEcCCcceecCC
Confidence 356799999999999999999996
No 20
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=5.5e-44 Score=328.29 Aligned_cols=206 Identities=35% Similarity=0.599 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEE
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 254 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id 254 (441)
|++||+|+++++.+++++.+.++||+||.||++.++..+.+.|+++.+|++++++|.|+..+|+.|+++++++||+|++|
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~gd~v~id 80 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGPSFDTIVASGPNSALPHGVPSDRKIEEGDLVLID 80 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCCCCCcEEEECccccccCCCCCCcCcCCCCEEEEE
Confidence 57999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred EeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC
Q 013513 255 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN 334 (441)
Q Consensus 255 ~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~ 334 (441)
+|+.++||++|++||+++ |+|+++++++|+++.++++++++++|||++++||++++.+++++ + ++.
T Consensus 81 ~g~~~~gy~~d~~RT~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~----~---------g~~ 146 (208)
T cd01092 81 FGAIYDGYCSDITRTVAV-GEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEE----A---------GYG 146 (208)
T ss_pred eeeeECCEeccceeEEEC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH----c---------Ccc
Confidence 999999999999999999 89999999999999999999999999999999999999988876 3 445
Q ss_pred CCCCCCccccCCCccccCCCCC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCc
Q 013513 335 ELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGY 403 (441)
Q Consensus 335 ~~~~~~~Gh~iGl~~~e~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~ 403 (441)
++++|++||++|+..||.|.+. ++.+|++||||+|||+++.++. +|+++||||+||++|+
T Consensus 147 ~~~~~~~Gh~iG~~~~e~p~i~~~~~~~l~~gmv~~iep~~~~~~~---------~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 147 EYFIHRTGHGVGLEVHEAPYISPGSDDVLEEGMVFTIEPGIYIPGK---------GGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCCCCCccccCcccCcCCCcCCCCCCCcCCCCEEEECCeEEecCC---------CEEEeeeEEEECCCCC
Confidence 5678999999999999999875 5789999999999999999887 7999999999999995
No 21
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.1e-43 Score=333.11 Aligned_cols=219 Identities=28% Similarity=0.327 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCccCCCcccCCCC
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRNDQKIDDGD 249 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~~~~~~l~~gd 249 (441)
|+.||+|+++++++++++++.++||+||.||++++...+.+.|++. ..|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 6899999999999999999999999999999999999999999864 23556788899999999999999999999
Q ss_pred eEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCC
Q 013513 250 LVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDG 329 (441)
Q Consensus 250 ~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~ 329 (441)
+|++|+|+.++||++|++||+++ |+|+++|+++|+.+.++++++++++|||++++||++++++++++ .|+.
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~----~G~~---- 151 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIV-GEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEK----NGYS---- 151 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----cCcc----
Confidence 99999999999999999999999 89999999999999999999999999999999999999998876 4432
Q ss_pred CCCCCCCCCCCccccCCCccccCCCCC------CCCCcCCCcEEEeCcceeeCCC--CCCC------CccceeeEEEeEe
Q 013513 330 TDPYNELNPTSIGHYLGMDVHDSSVVT------YERPLEPGVVITIEPGIYIPLS--FSGP------ERFRGIGIRIEDE 395 (441)
Q Consensus 330 ~~~~~~~~~~~~Gh~iGl~~~e~p~~~------~~~~l~~Gmv~~iep~~~~~~~--~~~~------~~~~~~g~~~ed~ 395 (441)
. ..+++|||+|+.+||.|.+. ++.+|++||||++||++|++.. ..|. .+++.+|+++|||
T Consensus 152 -----~-~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edt 225 (238)
T cd01086 152 -----V-VREFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHT 225 (238)
T ss_pred -----e-ecCccccCCCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeE
Confidence 2 35779999999999999754 4789999999999999997321 0111 1234479999999
Q ss_pred EEEcCCCccccCC
Q 013513 396 VLITETGYEVLTG 408 (441)
Q Consensus 396 vlVte~G~e~Lt~ 408 (441)
|+||++|+|+||.
T Consensus 226 v~Vte~G~e~Lt~ 238 (238)
T cd01086 226 VLITEDGPEILTL 238 (238)
T ss_pred EEEcCCcceeCCC
Confidence 9999999999984
No 22
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=5.1e-44 Score=333.62 Aligned_cols=221 Identities=18% Similarity=0.301 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hccCC--CCHHHHHHHHHHHHHHcCCC---------CCCCCceeeeCCCC-CccC
Q 013513 175 LKLMRESASIGCQALLQTML-----HSKSH--PYEGLLAAKFEYECKMRGAQ---------RMAFNPVVGGGPNA-AVIH 237 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~-----~~~pG--~tE~ei~~~~~~~~~~~G~~---------~~~~~~~v~~G~~~-~~~h 237 (441)
++++|+|++++..+|...+. .+.+| +|+.+|+..++..+...+.. ..+|+++|+||.|+ ..+|
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~h 80 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKS 80 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCeEeECcCcccCCC
Confidence 46899999999999987766 78999 99999999999999888755 56899999999999 8999
Q ss_pred ccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Q 013513 238 YSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRK 317 (441)
Q Consensus 238 ~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~ 317 (441)
..++++.+..|++|++|+|++|+|||+|++|||++ | |+++|+++|++++++++++++++|||+++++|++++.+++++
T Consensus 81 ~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v-~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 81 SSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLI-D-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCccccCCCCEEEEEeCcccCCEeecceEEEEc-C-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 5 799999999999999999999999999999999999999987
Q ss_pred HHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCC-C--CCCCcCCCcEEEeCccee-eCCCCCCCCccceeeEEEe
Q 013513 318 GLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVV-T--YERPLEPGVVITIEPGIY-IPLSFSGPERFRGIGIRIE 393 (441)
Q Consensus 318 ~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~-~--~~~~l~~Gmv~~iep~~~-~~~~~~~~~~~~~~g~~~e 393 (441)
... ++..+++|++|||||+++||.|.+ . ++.+|++||||++|||+| .++...++++++.+|+++|
T Consensus 159 ~~~-----------~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ie 227 (243)
T cd01091 159 KKP-----------ELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLS 227 (243)
T ss_pred hCh-----------hHHHhCcCCcccccCcccccCccccCCCCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEE
Confidence 411 356678899999999999998753 2 578999999999999999 5554345566777999999
Q ss_pred EeEEEcCCCc-cccCC
Q 013513 394 DEVLITETGY-EVLTG 408 (441)
Q Consensus 394 d~vlVte~G~-e~Lt~ 408 (441)
|||+||++|+ ++||.
T Consensus 228 DtV~Vt~~G~~~~LT~ 243 (243)
T cd01091 228 DTILVTEDEPAIVLTN 243 (243)
T ss_pred EEEEEcCCCCceecCC
Confidence 9999999999 99984
No 23
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.6e-41 Score=311.68 Aligned_cols=201 Identities=32% Similarity=0.567 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH-HHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEE
Q 013513 176 KLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYE-CKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 254 (441)
Q Consensus 176 ~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~-~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id 254 (441)
++||+|+++++++++++++.++||+||.||++.+... +.+.|....+|++++++|.|+..+|+.|++++|++||+|++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~gd~v~id 80 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNTDLPHYTPTDRRLQEGDIVIID 80 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCCGETTTBCCSSBESTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcceecceeccceeeecCCcceee
Confidence 5899999999999999999999999999999999988 677888888899999999999999999999999999999999
Q ss_pred EeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC
Q 013513 255 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN 334 (441)
Q Consensus 255 ~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~ 334 (441)
+|++|+||++|++||+++ | |+++|+++|+.++++++.+++++|||++++||++++.+.+.+ +|+ .
T Consensus 81 ~~~~~~gy~~d~~Rt~~~-G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~----~g~---------~ 145 (207)
T PF00557_consen 81 FGPRYDGYHADIARTFVV-G-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEE----YGL---------E 145 (207)
T ss_dssp EEEEETTEEEEEEEEEES-S-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHH----TTE---------G
T ss_pred ccceeeeeEeeeeeEEEE-e-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHh----hcc---------c
Confidence 999999999999999998 7 999999999999999999999999999999999999998876 444 3
Q ss_pred CCCCCCccccCCCccccC-CCCC---CCCCcCCCcEEEeCccee-eCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 335 ELNPTSIGHYLGMDVHDS-SVVT---YERPLEPGVVITIEPGIY-IPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 335 ~~~~~~~Gh~iGl~~~e~-p~~~---~~~~l~~Gmv~~iep~~~-~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
.+++|.+||+||+++||. |.+. ++.+|++||||++||+++ .++. +|+++||+|+|||
T Consensus 146 ~~~~~~~GH~iG~~~~~~~P~i~~~~~~~~l~~gmv~~iep~~~~~~~~---------~g~~~ed~v~Vte 207 (207)
T PF00557_consen 146 EPYPHGLGHGIGLEFHEPGPNIARPGDDTVLEPGMVFAIEPGLYFIPGW---------GGVRFEDTVLVTE 207 (207)
T ss_dssp EEBTSSSEEEESSSSSEEEEEESSTTTSSB--TTBEEEEEEEEEEETTS---------EEEEEBEEEEEES
T ss_pred ceeeecccccccccccccceeeecccccceecCCCceeEeeeEEccCCC---------cEEEEEEEEEECc
Confidence 456789999999999997 8875 689999999999999998 5565 6999999999997
No 24
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=5.9e-41 Score=309.66 Aligned_cols=204 Identities=27% Similarity=0.360 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHcCC-CCCCCCceeeeCCCCCccCccCC---CcccCCCC
Q 013513 176 KLMRESASIGCQALLQTMLHSKSH--PYEGLLAAKFEYECKMRGA-QRMAFNPVVGGGPNAAVIHYSRN---DQKIDDGD 249 (441)
Q Consensus 176 ~~~r~Aa~i~~~~~~~~~~~~~pG--~tE~ei~~~~~~~~~~~G~-~~~~~~~~v~~G~~~~~~h~~~~---~~~l~~gd 249 (441)
+.+|.+..++ ++++.+.+.++|| +||.||++.+++.+...|. ...+|+++|++|.|++.+|+.|+ +++|++||
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~v~~g~n~~~~H~~p~~~~~r~l~~GD 83 (224)
T cd01085 5 AHIRDGVALV-EFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVGLSFDTISGFGPNGAIVHYSPTEESNRKISPDG 83 (224)
T ss_pred HHHHHHHHHH-HHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcCCCcceEEEecCccCcCCCCcCcccCcccCCCC
Confidence 4566666664 8888899999999 9999999999987776653 34578999999999999999998 99999999
Q ss_pred eEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCCChHHHHHHHHHHHHHHHHhcCcccCC
Q 013513 250 LVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCM-PGTSLLQIHHYSVGMLRKGLKEIGIVNSD 328 (441)
Q Consensus 250 ~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~r-pG~~~~~v~~a~~~~~~~~~~~~G~~~~~ 328 (441)
+|++|+|+.++||++|++|||++ |+++++|+++|+.+++++.++++.++ ||+++.+|++++++.+.+ .|
T Consensus 84 ~V~iD~g~~~~gY~aD~~RT~~v-G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~----~g----- 153 (224)
T cd01085 84 LYLIDSGGQYLDGTTDITRTVHL-GEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWK----AG----- 153 (224)
T ss_pred EEEEEeCccCCCcccccEEeecC-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH----hC-----
Confidence 99999999999999999999998 89999999999999999999998885 999999999999888765 22
Q ss_pred CCCCCCCCCCCCccccCC--CccccCCCC--C--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCC
Q 013513 329 GTDPYNELNPTSIGHYLG--MDVHDSSVV--T--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETG 402 (441)
Q Consensus 329 ~~~~~~~~~~~~~Gh~iG--l~~~e~p~~--~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G 402 (441)
+ .+.|++||||| +.+||.|.+ . ++.+|++||||+|||++|.++. +|+|+||+|+||++|
T Consensus 154 ----~--~~~h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~GmvftiEP~iy~~g~---------~gvried~v~Vt~~G 218 (224)
T cd01085 154 ----L--DYGHGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGMILSNEPGYYKEGK---------YGIRIENLVLVVEAE 218 (224)
T ss_pred ----C--CCCCCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEEEECCEeEeCCC---------eEEEeeEEEEEeeCC
Confidence 2 25689999999 688999976 3 4689999999999999999887 799999999999999
Q ss_pred ccc
Q 013513 403 YEV 405 (441)
Q Consensus 403 ~e~ 405 (441)
+.-
T Consensus 219 ~~~ 221 (224)
T cd01085 219 TTE 221 (224)
T ss_pred cCC
Confidence 854
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=2e-39 Score=296.97 Aligned_cols=205 Identities=31% Similarity=0.526 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEE
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMD 254 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id 254 (441)
|+.+|+|+++++.++..+.+.++||+||.||.+.+...+.+.|+ ..++.+++++|.|+..+|+.|+++++++||+|++|
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~-~~~~~~~v~~g~~~~~~h~~~~~~~i~~gd~v~~d 79 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGG-YPAGPTIVGSGARTALPHYRPDDRRLQEGDLVLVD 79 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCC-CCCCCcEEEECccccCcCCCCCCCCcCCCCEEEEE
Confidence 57899999999999999999999999999999999999999999 45778899999998999999999999999999999
Q ss_pred EeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC
Q 013513 255 VGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN 334 (441)
Q Consensus 255 ~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~ 334 (441)
+|+.++||++|++||+++ |+++++++++|+.+.++++.+++.+|||+++.||++++.+.+++ .| +.
T Consensus 80 ~g~~~~gy~~d~~rt~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~----~g---------~~ 145 (207)
T cd01066 80 LGGVYDGYHADLTRTFVI-GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEE----HG---------LG 145 (207)
T ss_pred eceeECCCccceeceeEc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH----cC---------cc
Confidence 999999999999999999 89999999999999999999999999999999999999998887 33 33
Q ss_pred CCCCCCccccCCCccccCCCCC--CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCc
Q 013513 335 ELNPTSIGHYLGMDVHDSSVVT--YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGY 403 (441)
Q Consensus 335 ~~~~~~~Gh~iGl~~~e~p~~~--~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~ 403 (441)
.++.|++||++|++.||.|.+. ++.+|++||||++||+++.++. +|+++||+|+||++|+
T Consensus 146 ~~~~~~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv~~iep~~~~~~~---------~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 146 PNFGHRTGHGIGLEIHEPPVLKAGDDTVLEPGMVFAVEPGLYLPGG---------GGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCCCCCccccCcccCCCCCcCCCCCCCcCCCCEEEECCEEEECCC---------cEEEeeeEEEEeCCCC
Confidence 4567999999999999999754 5789999999999999999865 7999999999999985
No 26
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-39 Score=292.42 Aligned_cols=232 Identities=23% Similarity=0.306 Sum_probs=210.0
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCccCC
Q 013513 167 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRN 241 (441)
Q Consensus 167 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~~~ 241 (441)
--|+++++|+.||+|++++.+++..+...++||+|..||..++..+..++|+.+ ..|+-.++++.|..+.|+.|+
T Consensus 114 i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD 193 (369)
T KOG2738|consen 114 IKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPD 193 (369)
T ss_pred eeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCC
Confidence 458999999999999999999999999999999999999999999999999974 357788999999999999999
Q ss_pred CcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHh
Q 013513 242 DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKE 321 (441)
Q Consensus 242 ~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~ 321 (441)
.|+|+.||+|.||+...++||++|+.+||++ |+.++..+++.+..+++++.+|+.+|||+++.+|.+.+.+...+
T Consensus 194 ~RpLedGDIvNiDVtvY~~GyHGDlneTffv-G~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~---- 268 (369)
T KOG2738|consen 194 SRPLEDGDIVNIDVTVYLNGYHGDLNETFFV-GNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATK---- 268 (369)
T ss_pred cCcCCCCCEEeEEEEEEeccccCccccceEe-eccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhh----
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999988777654
Q ss_pred cCcccCCCCCCCCCCCCCCccccCCCccccCCCCCC------CCCcCCCcEEEeCcceeeCCCC--CCCCcc------ce
Q 013513 322 IGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY------ERPLEPGVVITIEPGIYIPLSF--SGPERF------RG 387 (441)
Q Consensus 322 ~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~------~~~l~~Gmv~~iep~~~~~~~~--~~~~~~------~~ 387 (441)
+|++. ....+|||||--+|-.|.++. ..++++||+|+|||.+...... .|||.| ++
T Consensus 269 ~g~sV----------Vr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~ 338 (369)
T KOG2738|consen 269 NGYSV----------VRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGK 338 (369)
T ss_pred cCcee----------ehhhhccccccccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCc
Confidence 66653 236799999999999998862 3579999999999999876653 599999 66
Q ss_pred eeEEEeEeEEEcCCCccccCCCCCCC
Q 013513 388 IGIRIEDEVLITETGYEVLTGSLPKE 413 (441)
Q Consensus 388 ~g~~~ed~vlVte~G~e~Lt~~~p~~ 413 (441)
..+++|+|+|||++|+|+||.+.|..
T Consensus 339 ~sAQFEhTlLVT~tG~EILT~r~~~~ 364 (369)
T KOG2738|consen 339 RSAQFEHTLLVTETGCEILTKRLPNS 364 (369)
T ss_pred eecceeeEEEEecccceehhcccCCC
Confidence 68999999999999999999865654
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=8.1e-39 Score=297.46 Aligned_cols=209 Identities=18% Similarity=0.231 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----------cCCCCCCCCceeeeCCCCCccCccC----
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKM----------RGAQRMAFNPVVGGGPNAAVIHYSR---- 240 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~----------~G~~~~~~~~~v~~G~~~~~~h~~~---- 240 (441)
++.||+|++|++++++.+.+.++||+||.||+..++..+.. .|..+.+|+++|+ .|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCC
Confidence 36899999999999999999999999999998777666665 5666777877776 4778889985
Q ss_pred CCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCH-----HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHH
Q 013513 241 NDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSS-----LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGML 315 (441)
Q Consensus 241 ~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~ 315 (441)
++++|++||+|++|+|+.|+||++|++|||++ |++++ +++++|+++.++++++++++|||++++||++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~v-G~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVV-GAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEe-CCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 78999999999999999999999999999999 88774 8999999999999999999999999999999999988
Q ss_pred HHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCCCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEe
Q 013513 316 RKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDE 395 (441)
Q Consensus 316 ~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~ 395 (441)
++ +|+. .+..++.|++||+++ .++.+. .-..+|++||||++||.++.++. +++++|||
T Consensus 158 ~~----~G~~------~~~~~~~h~~g~~~~--~~~~~~-~~~~~l~~gmvf~~ep~~~~~g~---------~~~~~~~T 215 (228)
T cd01089 158 VD----YGCT------PVEGVLSHQLKRVVS--SGEGKA-KLVECVKHGLLFPYPVLYEKEGE---------VVAQFKLT 215 (228)
T ss_pred HH----cCCE------EecCccccCcCceEe--cCCCCc-cchhhccCCcccccceeEccCCC---------eEEEEEEE
Confidence 76 6653 256677899999554 444432 12788999999999999999987 89999999
Q ss_pred EEEcCCCccccCC
Q 013513 396 VLITETGYEVLTG 408 (441)
Q Consensus 396 vlVte~G~e~Lt~ 408 (441)
|+||++|+|.||.
T Consensus 216 v~vt~~G~e~lt~ 228 (228)
T cd01089 216 VLLTPNGVTVLTG 228 (228)
T ss_pred EEEcCCCCeeCCC
Confidence 9999999999983
No 28
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-37 Score=285.72 Aligned_cols=226 Identities=26% Similarity=0.342 Sum_probs=197.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-----CCCCceeeeCCCCCccCccCC-
Q 013513 168 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-----MAFNPVVGGGPNAAVIHYSRN- 241 (441)
Q Consensus 168 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-----~~~~~~v~~G~~~~~~h~~~~- 241 (441)
.+|+++||+.||+|++|+.++++.+.+.++||+|..||...++..+.+.|+.+ -+|+--++.+.|....|+.|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 38999999999999999999999999999999999999999999999765542 134455888899999999998
Q ss_pred CcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHH
Q 013513 242 DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFS-SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLK 320 (441)
Q Consensus 242 ~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~ 320 (441)
+++|++||+|.||+|+.++||++|.++|+.| |+.+ +..+++.++++++..++++++|||+++++|-+++++++++
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~v-g~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~--- 159 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVV-GEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAES--- 159 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEEC-CCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH---
Confidence 5789999999999999999999999999999 7555 5777899999999999999999999999999999988774
Q ss_pred hcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCC------CCCcCCCcEEEeCcceeeCCCC--CCC-Ccc------
Q 013513 321 EIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY------ERPLEPGVVITIEPGIYIPLSF--SGP-ERF------ 385 (441)
Q Consensus 321 ~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~------~~~l~~Gmv~~iep~~~~~~~~--~~~-~~~------ 385 (441)
+||.+- ...+|||||..+||.|.+++ ..+|++||||+|||.+...... .++ ++|
T Consensus 160 -~G~~vV----------r~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d 228 (255)
T COG0024 160 -RGFSVV----------RNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKD 228 (255)
T ss_pred -cCCEEe----------ecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCC
Confidence 776653 35689999999999999874 3689999999999988765331 233 455
Q ss_pred ceeeEEEeEeEEEcCCCccccCC
Q 013513 386 RGIGIRIEDEVLITETGYEVLTG 408 (441)
Q Consensus 386 ~~~g~~~ed~vlVte~G~e~Lt~ 408 (441)
++..+++|+||+||++|+++||.
T Consensus 229 ~~~~aq~EHTv~Vt~~g~eilT~ 251 (255)
T COG0024 229 GSLSAQFEHTVIVTEDGCEILTL 251 (255)
T ss_pred CCEEeEEEEEEEEeCCCcEEeeC
Confidence 77889999999999999999997
No 29
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=3e-34 Score=284.86 Aligned_cols=198 Identities=16% Similarity=0.113 Sum_probs=167.0
Q ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc----CCC-CCCCCceeeeCCCCCccCccC
Q 013513 166 LRWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMR----GAQ-RMAFNPVVGGGPNAAVIHYSR 240 (441)
Q Consensus 166 ~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~----G~~-~~~~~~~v~~G~~~~~~h~~~ 240 (441)
-+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..++..+++. |+. +.+|++.+ +.|.+.+|+.|
T Consensus 149 ~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFPt~v--S~N~~aaH~tP 226 (470)
T PTZ00053 149 ELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFPTGC--SLNHCAAHYTP 226 (470)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCCcee--ecCccccCCCC
Confidence 344589999999999999999999999999999999999999988866543 663 57888754 57888999999
Q ss_pred C---CcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Q 013513 241 N---DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRK 317 (441)
Q Consensus 241 ~---~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~ 317 (441)
+ +++|++||+|.||+|+.++||++|++||+++ | ++++++++++++|+++++++++||++++||..++++++++
T Consensus 227 ~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~v-g---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies 302 (470)
T PTZ00053 227 NTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAF-N---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIES 302 (470)
T ss_pred CCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEe-C---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 6 6899999999999999999999999999988 5 6889999999999999999999999999999999999886
Q ss_pred HHHhcCcccCCCCCCC-CCCCCCCccccCCC-ccccCCCCC-----CCCCcCCCcEEEeCcceee
Q 013513 318 GLKEIGIVNSDGTDPY-NELNPTSIGHYLGM-DVHDSSVVT-----YERPLEPGVVITIEPGIYI 375 (441)
Q Consensus 318 ~~~~~G~~~~~~~~~~-~~~~~~~~Gh~iGl-~~~e~p~~~-----~~~~l~~Gmv~~iep~~~~ 375 (441)
+|+..... -| .....|.+|||||+ .+|+.|.++ +..+|++||||+|||.+..
T Consensus 303 ----~G~e~~Gk--~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~st 361 (470)
T PTZ00053 303 ----YEVEIKGK--TYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFAST 361 (470)
T ss_pred ----cCCcccCc--ccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeC
Confidence 55431100 01 12347999999997 899855443 4679999999999997654
No 30
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=5.3e-34 Score=273.62 Aligned_cols=181 Identities=24% Similarity=0.267 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCC---CcccCCCCe
Q 013513 174 ELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRN---DQKIDDGDL 250 (441)
Q Consensus 174 Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~---~~~l~~gd~ 250 (441)
+|+.||+|++|++++++.+.+.++||+||.||++.++..+.+.|+. .+|++.++.|. ..+|+.|. +++|++||+
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~-~afp~~vs~n~--~~~H~~p~~~d~~~l~~GDv 77 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAK-PAFPCNISINE--VAAHYTPSPGDERVFPEGDV 77 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCc-cCCCCEEeeCC--CccCCCCCCCCCcccCCCCE
Confidence 5899999999999999999999999999999999999999999975 67888887655 45799885 689999999
Q ss_pred EEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCC
Q 013513 251 VLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGT 330 (441)
Q Consensus 251 v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~ 330 (441)
|.+|+|+.++||++|++||+++ | ++++++++++.++++++++.+|||++++||++++++++++ +|+.
T Consensus 78 V~iD~G~~~dGY~aD~arT~~v-G---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~----~G~~----- 144 (291)
T PRK08671 78 VKLDLGAHVDGYIADTAVTVDL-G---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRS----YGFK----- 144 (291)
T ss_pred EEEEEeEEECCEEEEEEEEEEe-C---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----cCCc-----
Confidence 9999999999999999999998 5 4788999999999999999999999999999999988876 5543
Q ss_pred CCCCCCCCCCccccCCC-ccccCCCCC-----CCCCcCCCcEEEeCcceee
Q 013513 331 DPYNELNPTSIGHYLGM-DVHDSSVVT-----YERPLEPGVVITIEPGIYI 375 (441)
Q Consensus 331 ~~~~~~~~~~~Gh~iGl-~~~e~p~~~-----~~~~l~~Gmv~~iep~~~~ 375 (441)
. ..+.+|||||+ .+|+.|.++ ++.+|++||||+|||.+..
T Consensus 145 ----~-~~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~ 190 (291)
T PRK08671 145 ----P-IRNLTGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATD 190 (291)
T ss_pred ----c-cCCCcccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEEC
Confidence 2 24789999996 889998765 3689999999999997643
No 31
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=3.3e-33 Score=276.39 Aligned_cols=242 Identities=17% Similarity=0.196 Sum_probs=199.6
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcC----------CCCCCCCceeeeCCCCCcc
Q 013513 167 RWVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRG----------AQRMAFNPVVGGGPNAAVI 236 (441)
Q Consensus 167 R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G----------~~~~~~~~~v~~G~~~~~~ 236 (441)
-.+|+++||+.||+|++|+.++++.+.+.++||+|+.||+..++..+.+.+ ..+++|++.|+ .|...+
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS--vN~~v~ 88 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS--VNNCVG 88 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe--cCCeee
Confidence 469999999999999999999999999999999999999998877777643 45667876665 788899
Q ss_pred CccC--C--CcccCCCCeEEEEEeeeECCeeeeeEEEeecCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCChHHH
Q 013513 237 HYSR--N--DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGS-----FSSLEEALYDLILQTNKECLELCMPGTSLLQI 307 (441)
Q Consensus 237 h~~~--~--~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v 307 (441)
|+.| + +++|++||+|.||+|+.++||++|++||++| |+ +++++.++++++.+|++++++++|||++++||
T Consensus 89 H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~v-G~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI 167 (389)
T TIGR00495 89 HFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVV-GVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQV 167 (389)
T ss_pred CCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEE-CCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 9999 2 4899999999999999999999999999999 64 57889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCcccc-CCCC-CC----------CCCcCCCcEEEeCcceee
Q 013513 308 HHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHD-SSVV-TY----------ERPLEPGVVITIEPGIYI 375 (441)
Q Consensus 308 ~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e-~p~~-~~----------~~~l~~Gmv~~iep~~~~ 375 (441)
.+++++++++ +|+.+- .+.+||+||..+|+ .|.+ .+ +..|++||||+|||.+..
T Consensus 168 ~~ai~~v~~~----~G~~~v----------~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~ 233 (389)
T TIGR00495 168 TEAINKVAHS----YGCTPV----------EGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVST 233 (389)
T ss_pred HHHHHHHHHH----cCCeec----------CCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecC
Confidence 9999988876 666542 36689999999998 6664 22 357999999999998765
Q ss_pred CCCC--------------------------------------------CCC--------------------------Ccc
Q 013513 376 PLSF--------------------------------------------SGP--------------------------ERF 385 (441)
Q Consensus 376 ~~~~--------------------------------------------~~~--------------------------~~~ 385 (441)
.... .|. ++.
T Consensus 234 G~g~v~~~~~~~tiy~~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~ 313 (389)
T TIGR00495 234 GEGKAKDADQRTTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKE 313 (389)
T ss_pred CCceEEECCCeeEEEEECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeC
Confidence 4320 111 122
Q ss_pred ceeeEEEeEeEEEcCCCccccCCCCCCCH-----------HHHHHHHcCCCc
Q 013513 386 RGIGIRIEDEVLITETGYEVLTGSLPKEI-----------KHIESLLNNFSS 426 (441)
Q Consensus 386 ~~~g~~~ed~vlVte~G~e~Lt~~~p~~~-----------~~i~~~~~~~~~ 426 (441)
+++-++++.||+|+++|+++||. .|..+ .+|.++|+..-.
T Consensus 314 g~~Vaqf~~Tv~v~~~g~~~~t~-~~~~~~~~~s~~~~~d~~~~~~l~~~~~ 364 (389)
T TIGR00495 314 GEFVAQFKFTVLLMPNGPMRITS-GEFEPDLYKSEMEVQDPEIKALLASPIK 364 (389)
T ss_pred CCeEEEEEEEEEECCCCcEEeCC-CCCCHhhcCCCCCCCCHHHHHHHhCccc
Confidence 66779999999999999999997 44332 345566665554
No 32
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=1.9e-33 Score=269.87 Aligned_cols=182 Identities=19% Similarity=0.218 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCC---CcccCCC
Q 013513 172 PAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRN---DQKIDDG 248 (441)
Q Consensus 172 ~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~---~~~l~~g 248 (441)
-+||+.||+|++|++++++.+.+.++||+||.||++.++..+.+.|++ .+|++.++ .|...+|+.|. +++|++|
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~-~aFp~~vs--~n~~~~H~~p~~~d~~~l~~G 78 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAE-PAFPCNIS--INECAAHFTPKAGDKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCC-CCCCccee--cCCEeeCCCCCCCcCccCCCC
Confidence 378999999999999999999999999999999999999999999988 58988776 46677899985 6789999
Q ss_pred CeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCC
Q 013513 249 DLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSD 328 (441)
Q Consensus 249 d~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~ 328 (441)
|+|.+|+|+.++||++|++||+++ |+ .++++|+++.+|++++++.+|||++++||++++++++.+ +|+.
T Consensus 79 DvV~iD~G~~~dGY~aD~arT~~v-G~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~----~G~~--- 147 (295)
T TIGR00501 79 DVVKLDLGAHVDGYIADTAITVDL-GD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIES----YGVK--- 147 (295)
T ss_pred CEEEEEEeEEECCEEEEEEEEEEe-Cc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH----cCCe---
Confidence 999999999999999999999998 64 368999999999999999999999999999999999876 5544
Q ss_pred CCCCCCCCCCCCccccCC-CccccCCCCC-----CCCCcCCCcEEEeCccee
Q 013513 329 GTDPYNELNPTSIGHYLG-MDVHDSSVVT-----YERPLEPGVVITIEPGIY 374 (441)
Q Consensus 329 ~~~~~~~~~~~~~Gh~iG-l~~~e~p~~~-----~~~~l~~Gmv~~iep~~~ 374 (441)
. ..+.+|||+| +..|+.+.++ ++.+|++||||+|||.+.
T Consensus 148 ------~-i~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~ 192 (295)
T TIGR00501 148 ------P-ISNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFAT 192 (295)
T ss_pred ------e-ecCCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEE
Confidence 3 2578999999 5778764442 367899999999999654
No 33
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=8e-33 Score=265.50 Aligned_cols=179 Identities=22% Similarity=0.219 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCC---cccCCCCeE
Q 013513 175 LKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRND---QKIDDGDLV 251 (441)
Q Consensus 175 i~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~---~~l~~gd~v 251 (441)
++.+|+|++|++++++++.+.++||+||.||++.++..+.+.|+. .+|++. .+.|...+|+.|+. ++|++||+|
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~-~afp~~--is~n~~~~H~~p~~~d~~~l~~GDvV 77 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG-PAFPVN--LSINECAAHYTPNAGDDTVLKEGDVV 77 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC-CCCCce--eccCCEeeCCCCCCCCCcccCCCCEE
Confidence 368999999999999999999999999999999999999999974 678754 45777889999964 899999999
Q ss_pred EEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCC
Q 013513 252 LMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTD 331 (441)
Q Consensus 252 ~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~ 331 (441)
.+|+|+.++||++|++||+++ |+ .+++++++++++++++++.+|||++++||++++++++++ +|+.+
T Consensus 78 ~iD~G~~~dGY~sD~arT~~v-g~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~----~G~~~----- 144 (291)
T cd01088 78 KLDFGAHVDGYIADSAFTVDF-DP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIES----YGFKP----- 144 (291)
T ss_pred EEEEEEEECCEEEEEEEEEec-Ch---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH----cCCEE-----
Confidence 999999999999999999998 53 788999999999999999999999999999999998876 55543
Q ss_pred CCCCCCCCCccccCC-CccccCCCCC-----CCCCcCCCcEEEeCccee
Q 013513 332 PYNELNPTSIGHYLG-MDVHDSSVVT-----YERPLEPGVVITIEPGIY 374 (441)
Q Consensus 332 ~~~~~~~~~~Gh~iG-l~~~e~p~~~-----~~~~l~~Gmv~~iep~~~ 374 (441)
..+.+||||| +..|+.|.++ ++.+|++||||+|||.+.
T Consensus 145 -----~~~~~GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s 188 (291)
T cd01088 145 -----IRNLTGHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFAT 188 (291)
T ss_pred -----eecCCccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEE
Confidence 2478999999 5788886653 368999999999999654
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=280.02 Aligned_cols=351 Identities=19% Similarity=0.253 Sum_probs=258.8
Q ss_pred CCCCceEEEcCCCCCCeEEEEEcCCceEEEccCCCcccccc-------cccccCcccccccccCCcCCchhHHHHHHHHh
Q 013513 51 RQDANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIW-------KGQIAGVDAAPETFKADKAYPMSKIQEILPDM 123 (441)
Q Consensus 51 ~~~~n~~yltG~~~~~~~lvv~~~~~~~l~~~~~~~~~~~w-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 123 (441)
++.+-+.||.||..|++++++.++ ..++++....+....- .+..+++....+.-.-++...++.+.++|+.
T Consensus 15 KssAL~~WLlGYEfpdTilv~~~~-~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~ik~- 92 (960)
T KOG1189|consen 15 KSSALFTWLLGYEFPDTILVLCKD-KIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKAIKS- 92 (960)
T ss_pred HHHHHHHHHhccccCceEEEEecC-cEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHHHHHHHHh-
Confidence 345667899999999999999975 6666666544432100 0000111111111122333457777777776
Q ss_pred hccCCceeecccccccchhHHHHHHhhc--cCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHH-----hc
Q 013513 124 IGRSSKLFHNQETAVQTYTNLEAFQKAD--FYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTML-----HS 196 (441)
Q Consensus 124 ~~~~~~igv~~~~~~~~~~~~~~l~~~~--~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~-----~~ 196 (441)
.+++||+-.. ...+-.+.......+ .+.+.+|++..+..+-+||++.||+.+|+|+.++...|...+. .+
T Consensus 93 --~gk~vGvf~k-e~~~G~F~~~W~~~l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~ai 169 (960)
T KOG1189|consen 93 --AGKKVGVFAK-EKFQGEFMESWNKRLEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAI 169 (960)
T ss_pred --cCCeeeeecc-cccchhHHHHHHHHhhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677887321 111112222222222 2567899999999999999999999999999999999985443 34
Q ss_pred cCC--CCHHHHHHHHHHHHHHc----CCC----CCCCCceeeeCCCCCc-cCccCCCcccCCCCeEEEEEeeeECCeeee
Q 013513 197 KSH--PYEGLLAAKFEYECKMR----GAQ----RMAFNPVVGGGPNAAV-IHYSRNDQKIDDGDLVLMDVGCELHGYVSD 265 (441)
Q Consensus 197 ~pG--~tE~ei~~~~~~~~~~~----G~~----~~~~~~~v~~G~~~~~-~h~~~~~~~l~~gd~v~id~g~~~~GY~~d 265 (441)
..+ +|..-+...++..+... |.. .+.|+||++||.+..+ +....+++.| + +|++.+|++|++||++
T Consensus 170 D~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d~cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSN 246 (960)
T KOG1189|consen 170 DEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLDMCYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSN 246 (960)
T ss_pred hccchhhhHHHHHHHHHHhhccccCcccCccccccccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhcc
Confidence 444 46666666666665442 322 3689999999988764 4445566777 4 9999999999999999
Q ss_pred eEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccC
Q 013513 266 MTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYL 345 (441)
Q Consensus 266 ~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~i 345 (441)
++|||.| .|+.+|.+.|+.++.+|++++..||||++.++||.++.+++.+.-+ .+...+...+|.||
T Consensus 247 v~RT~Li--dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~P-----------el~~~~~k~lG~~i 313 (960)
T KOG1189|consen 247 VSRTYLI--DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKP-----------ELVPNFTKNLGFGI 313 (960)
T ss_pred ccceeee--cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCc-----------chhhhhhhhccccc
Confidence 9999998 8999999999999999999999999999999999999999988422 45666788899999
Q ss_pred CCccccCCCCC---CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCc-cccCCCCCCCHHHHHHHH
Q 013513 346 GMDVHDSSVVT---YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGY-EVLTGSLPKEIKHIESLL 421 (441)
Q Consensus 346 Gl~~~e~p~~~---~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~-e~Lt~~~p~~~~~i~~~~ 421 (441)
|++++|..++. ++.+|++||||.|..|+..-.. +..-+.|.+.+.|||+|+++++ ++||. +++....+.++.
T Consensus 314 GlEFREssl~inaKnd~~lk~gmvFni~lGf~nl~n---~~~~~~yaL~l~DTvlv~e~~p~~vLT~-~~K~~~dv~~~f 389 (960)
T KOG1189|consen 314 GLEFRESSLVINAKNDRVLKKGMVFNISLGFSNLTN---PESKNSYALLLSDTVLVGEDPPAEVLTD-SAKAVKDVSYFF 389 (960)
T ss_pred ceeeecccccccccchhhhccCcEEEEeeccccccC---cccccchhhhccceeeecCCCcchhhcc-cchhhcccceee
Confidence 99999998764 6899999999999988753211 1223447899999999999998 99998 999999999999
Q ss_pred cCCCc
Q 013513 422 NNFSS 426 (441)
Q Consensus 422 ~~~~~ 426 (441)
+++++
T Consensus 390 ~~eee 394 (960)
T KOG1189|consen 390 KDEEE 394 (960)
T ss_pred ccchh
Confidence 97664
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.1e-29 Score=251.19 Aligned_cols=357 Identities=24% Similarity=0.302 Sum_probs=259.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCcEE-EEecCCc------ccccCCCCCCCCCCCceEEEcCCCCCCeEEEEEcCCceEEEcc
Q 013513 10 ISAEEYISRRKRLLEILPENSVA-ILAAAPE------KMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMFMP 82 (441)
Q Consensus 10 ~~~~e~~~R~~rl~~~m~~~gl~-~l~~~~~------~~~~~~~~~~~~~~~n~~yltG~~~~~~~lvv~~~~~~~l~~~ 82 (441)
+........+..||+.|++.+.+ ++++.-+ +.|++|.+|. + ++| +|++++.+ +..||++
T Consensus 169 ~~G~~~~~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipyn----P-v~~--------sY~~it~d-ei~lfvd 234 (606)
T KOG2413|consen 169 FAGLSVDDKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYN----P-VFY--------SYAIITMD-EIFLFVD 234 (606)
T ss_pred ccCcchhHHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCC----c-hhh--------hhhhhhhh-hhheeec
Confidence 34455677889999999999985 4444321 6777777663 1 111 46777765 7888887
Q ss_pred CCCcccccccccccCcccccccc--cCCcCCchhHHHHHHHHhhcc--CCceeecccccccchhHHHHHHhhccCCceee
Q 013513 83 ETSAHDVIWKGQIAGVDAAPETF--KADKAYPMSKIQEILPDMIGR--SSKLFHNQETAVQTYTNLEAFQKADFYGAVRN 158 (441)
Q Consensus 83 ~~~~~~~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~--~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d 158 (441)
........ ..++ ..-.+.+++.+...++.+..+ ..+|.+....+ ..+....+....+.
T Consensus 235 ~~k~~~~~-----------~~~~~~~~v~i~pY~~i~~~i~~~~~~~~~~~i~ia~~~~-------~~i~~~i~~~~~~~ 296 (606)
T KOG2413|consen 235 NSKLSDES-----------KKHLREDGVEIRPYDQIWSDIKNWASAFADKKIWISPETN-------YGIGELIGEDHSMI 296 (606)
T ss_pred CcccCchh-----------HHHHhhCceeeeeHHHHHHHHHHHhcccCceeEeecccce-------eeeccccccccccc
Confidence 75443221 1111 112356777887777777543 34565543211 12223334444455
Q ss_pred hHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHH----HhccCC--CCHHHHHHHHHHHH-HHcCCCCCCCCceeee-C
Q 013513 159 LSRLTHELRWVKSPAELKLMRESASIGCQALLQTM----LHSKSH--PYEGLLAAKFEYEC-KMRGAQRMAFNPVVGG-G 230 (441)
Q Consensus 159 ~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~----~~~~pG--~tE~ei~~~~~~~~-~~~G~~~~~~~~~v~~-G 230 (441)
....|..++++|.+.|++.||.|----..|+...+ ..+..| +||.+++..++..= ...+..+.+|++|.++ |
T Consensus 297 ~~Spi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G 376 (606)
T KOG2413|consen 297 DPSPISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVG 376 (606)
T ss_pred ccCHHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccCcCcceeeccCC
Confidence 55668899999999999999887544444444444 345567 89999999987654 4456778899999977 9
Q ss_pred CCCCccCccCC---CcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCChHH
Q 013513 231 PNAAVIHYSRN---DQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMP-GTSLLQ 306 (441)
Q Consensus 231 ~~~~~~h~~~~---~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rp-G~~~~~ 306 (441)
+|+++.||.|. ++++.+..+.++|-|++|.--++|+|||+++ |+||+++++.|..++..+-+...+.-| |+...-
T Consensus 377 ~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hf-gePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~ 455 (606)
T KOG2413|consen 377 PNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHF-GEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSV 455 (606)
T ss_pred CCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEec-CCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcch
Confidence 99999999995 4699999999999999999899999999998 999999999999999999998888775 566666
Q ss_pred HHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCC--CccccCCCCC------CCCCcCCCcEEEeCcceeeCCC
Q 013513 307 IHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG--MDVHDSSVVT------YERPLEPGVVITIEPGIYIPLS 378 (441)
Q Consensus 307 v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iG--l~~~e~p~~~------~~~~l~~Gmv~~iep~~~~~~~ 378 (441)
+...++..+++ .|+ .+.|+.|||+| +.+||+|... +...|++||++++|||+|..+.
T Consensus 456 lD~laR~~LW~----~gL-----------Dy~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~ 520 (606)
T KOG2413|consen 456 LDALARSALWK----AGL-----------DYGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGE 520 (606)
T ss_pred hHHHHHHHHHh----hcc-----------ccCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCc
Confidence 77767777765 332 34689999999 5789999532 4678999999999999999888
Q ss_pred CCCCCccceeeEEEeEeEEEcCCCc----------cccCCCCCCCHHHHHHHHcCC
Q 013513 379 FSGPERFRGIGIRIEDEVLITETGY----------EVLTGSLPKEIKHIESLLNNF 424 (441)
Q Consensus 379 ~~~~~~~~~~g~~~ed~vlVte~G~----------e~Lt~~~p~~~~~i~~~~~~~ 424 (441)
||+|+|+.++|.+.+. +.||- +|.+...|...|-++
T Consensus 521 ---------fGIRienv~~vvd~~~~~~~~~~L~fe~lT~-vP~q~klid~~LLs~ 566 (606)
T KOG2413|consen 521 ---------FGIRIENVVEVVDAGTKHNFRGFLTFEPLTL-VPYQTKLIDKSLLSE 566 (606)
T ss_pred ---------ceEEEeeEEEEEeccccccccceeeecccee-cceecccCChhhCCH
Confidence 8999999999977543 45775 888877665544433
No 36
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.92 E-value=1.8e-24 Score=212.62 Aligned_cols=388 Identities=17% Similarity=0.195 Sum_probs=260.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCC-c----EEEEecCCcccccCCCCCCC-CCCCceEEEcCCCCCCeEEEEEcCCceEEEcc
Q 013513 9 GISAEEYISRRKRLLEILPEN-S----VAILAAAPEKMMTDVVPYPY-RQDANYLYITGCQQPGGVAVLSHECGLCMFMP 82 (441)
Q Consensus 9 ~~~~~e~~~R~~rl~~~m~~~-g----l~~l~~~~~~~~~~~~~~~~-~~~~n~~yltG~~~~~~~lvv~~~~~~~l~~~ 82 (441)
.|+...|.+|++-|+..+.+. | +.+.++.. +...+| ++..-+.||.||..|.+++++.+ +..++.+.
T Consensus 5 ~ide~~F~kR~~~l~~~~ne~dG~p~sllv~lG~s------~d~npyqk~taLh~wLLgYEFP~Tli~l~~-~~~~I~ts 77 (1001)
T COG5406 5 RIDEERFEKRSRDLRKHLNEEDGGPDSLLVMLGKS------QDVNPYQKNTALHIWLLGYEFPETLIILDD-VCTAITTS 77 (1001)
T ss_pred cccHHHHHHHHHHHHHhhhhccCCCceEEEEeccc------cccChhhhhhHHHHHHHhccCcceEEEEec-ceEEEEec
Confidence 467788999999999999553 2 33445532 222233 33455689999999998887775 56666665
Q ss_pred CCCcccccccccccCccccc-ccccCCcCCchhHHHHHHHHhh----ccCCceeecc-cccc---c-ch-hHHHHHHhhc
Q 013513 83 ETSAHDVIWKGQIAGVDAAP-ETFKADKAYPMSKIQEILPDMI----GRSSKLFHNQ-ETAV---Q-TY-TNLEAFQKAD 151 (441)
Q Consensus 83 ~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~----~~~~~igv~~-~~~~---~-~~-~~~~~l~~~~ 151 (441)
...+.... .+-..+..... ...+. ....++...++.++.+ ...+.||+-. +... + -| ..++.++.
T Consensus 78 ~~kA~~lq-k~l~~~~~~~v~~n~~~-r~k~~eenkKlF~~~i~~i~s~~k~VG~f~kD~~qgkfi~ew~~i~e~vk~-- 153 (1001)
T COG5406 78 KKKAILLQ-KGLAETSLNIVVRNKDN-RTKNMEENKKLFKGSIYVIGSENKIVGDFCKDVLQGKFINEWDSIFEPVKS-- 153 (1001)
T ss_pred hhhHHHHH-hhhccCcchhhhhhhhh-cccCHHHHHHHHhhhheecccCCcccCccchhhhhcccccccchhhhhhhh--
Confidence 54332210 00000001110 01111 1223334333333322 2345677531 1111 1 01 12344444
Q ss_pred cCCceeehHHHHhHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhcc----CC--CCHHHHHHHHHHHHH----------H
Q 013513 152 FYGAVRNLSRLTHELRWVKSPAELKLMRESASIGCQALLQTMLHSK----SH--PYEGLLAAKFEYECK----------M 215 (441)
Q Consensus 152 ~~~~~~d~~~~i~~~R~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~----pG--~tE~ei~~~~~~~~~----------~ 215 (441)
..+.+|++.-+..+-.+|+.+||+.+|.+++.+...|......+. .+ +|...+...++..+- +
T Consensus 154 -efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~ 232 (1001)
T COG5406 154 -EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLK 232 (1001)
T ss_pred -hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCcc
Confidence 345689999999999999999999999999999998884443221 11 233333333322111 1
Q ss_pred cCC-----CCCCCCceeeeCCCCCc-cCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHH
Q 013513 216 RGA-----QRMAFNPVVGGGPNAAV-IHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQ 289 (441)
Q Consensus 216 ~G~-----~~~~~~~~v~~G~~~~~-~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~ 289 (441)
.|- -.+.|.||++||...-+ +.....++.+- ||+|++.+|.+|+|||++++||+.+ +|+.+|.+.|+.+..
T Consensus 233 l~~~~~d~lew~ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~--dp~~e~~~Ny~fl~~ 309 (1001)
T COG5406 233 LGDIDLDQLEWCYTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT--DPDSEQQKNYEFLYM 309 (1001)
T ss_pred ccccchhhhhhhcchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe--CCchHhhhhHHHHHH
Confidence 121 12568889999876543 33333444443 7899999999999999999999987 899999999999999
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCC---CCCCcCCCcE
Q 013513 290 TNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT---YERPLEPGVV 366 (441)
Q Consensus 290 ~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~---~~~~l~~Gmv 366 (441)
+|+.++..+|||++.++||..+.+++.+... .+...|...+|-+||+++++...+. ++++|+.||+
T Consensus 310 lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~p-----------el~pnF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~ 378 (1001)
T COG5406 310 LQKYILGLVRPGTDSGIIYSEAEKYISSNGP-----------ELGPNFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCI 378 (1001)
T ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHhcCC-----------ccCchHhhhhhhhccccccccccceeccCCceeccccE
Confidence 9999999999999999999999999987422 4566778899999999999876553 6899999999
Q ss_pred EEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCccccCCCCCCCHHHHHHHHcCCCc
Q 013513 367 ITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGYEVLTGSLPKEIKHIESLLNNFSS 426 (441)
Q Consensus 367 ~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~e~Lt~~~p~~~~~i~~~~~~~~~ 426 (441)
|.|..|+-. ..+ +.-.++|.+.+-||+.|+-+-+.++|. .|+---.|..+++++++
T Consensus 379 fnis~gf~n--l~~-~~~~Nnyal~l~dt~qi~ls~p~~~t~-~~kaq~~isf~fgedd~ 434 (1001)
T COG5406 379 FNISLGFGN--LIN-PHPKNNYALLLIDTEQISLSNPIVFTD-SPKAQGDISFLFGEDDE 434 (1001)
T ss_pred EEEeecccc--cCC-CCcccchhhhhccceEeecCCceeccc-CcccccceeEEecCCCC
Confidence 999876632 100 112245889999999999999999998 89999999999997775
No 37
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=99.65 E-value=4.7e-17 Score=137.76 Aligned_cols=125 Identities=38% Similarity=0.747 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCCCCCCeEEEE-EcC-CceEEEccCCCcc
Q 013513 10 ISAEEYISRRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVL-SHE-CGLCMFMPETSAH 87 (441)
Q Consensus 10 ~~~~e~~~R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~~~lvv-~~~-~~~~l~~~~~~~~ 87 (441)
||.++|.+|+++|.+.|.+.++.++.+++..++.+|..|+|+|++||+||||+..|++++++ ..+ +..+||+|+.+..
T Consensus 1 i~~~~~~~RR~~l~~~l~~~~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~d~~ 80 (134)
T PF05195_consen 1 IPAEEYAERRKKLAEKLPDNSIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPKDPD 80 (134)
T ss_dssp -EHHHHHHHHHHHHHHSHSSEEEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE----CC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCCCcC
Confidence 57899999999999999999999999999999999999999999999999999999999999 443 5799999999999
Q ss_pred cccccccccCcccccccccCCcCCchhHHHHHHHHhhccCCceeecc
Q 013513 88 DVIWKGQIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQ 134 (441)
Q Consensus 88 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igv~~ 134 (441)
.+.|.+.+.+.+.+...++++.+.+.+++.+.|.+++.....+..+.
T Consensus 81 ~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~~~~~~~~~~ 127 (134)
T PF05195_consen 81 DEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLKRSRTVYYDL 127 (134)
T ss_dssp GHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHTTTSCEEE-T
T ss_pred ccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHcCCCEEEEEC
Confidence 99999999999999889999999999999999999887666666654
No 38
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.51 E-value=5.6e-13 Score=121.82 Aligned_cols=190 Identities=16% Similarity=0.127 Sum_probs=148.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH----HcCCC-CCCCCceeeeCCCCCccCccCCC---
Q 013513 171 SPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECK----MRGAQ-RMAFNPVVGGGPNAAVIHYSRND--- 242 (441)
Q Consensus 171 s~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~----~~G~~-~~~~~~~v~~G~~~~~~h~~~~~--- 242 (441)
..+...-+|+||++..++-+.+...++||||-.||+..++...+ +.|.. +.+||+- .+-|.+..||+|+.
T Consensus 81 ~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG--~SlN~cAAHyTpNaGd~ 158 (397)
T KOG2775|consen 81 ESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTG--CSLNHCAAHYTPNAGDK 158 (397)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCc--ccccchhhhcCCCCCCc
Confidence 34556778999999999999999999999999999999976543 34443 4577743 34677888999953
Q ss_pred cccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhc
Q 013513 243 QKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEI 322 (441)
Q Consensus 243 ~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~ 322 (441)
.+|+.+|++.||+|...+|-..|.+.|+.+ ++....+..+++++...++...-.-+++.||.++++++++.+-.+.
T Consensus 159 tVLqydDV~KiDfGthi~GrIiDsAFTv~F----~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi 234 (397)
T KOG2775|consen 159 TVLKYDDVMKIDFGTHIDGRIIDSAFTVAF----NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEI 234 (397)
T ss_pred eeeeecceEEEeccccccCeEeeeeeEEee----CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEe
Confidence 589999999999999999999999999987 4556679999999999999999999999999999999998754333
Q ss_pred CcccCCCCCCCCCCCCCCccccCCC-ccccCCCCC-----CCCCcCCCcEEEeCc
Q 013513 323 GIVNSDGTDPYNELNPTSIGHYLGM-DVHDSSVVT-----YERPLEPGVVITIEP 371 (441)
Q Consensus 323 G~~~~~~~~~~~~~~~~~~Gh~iGl-~~~e~p~~~-----~~~~l~~Gmv~~iep 371 (441)
+-.... -+-...-.||+|+. .+|-.-.++ ..+.+++|..++||.
T Consensus 235 ~Gk~~~-----VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIET 284 (397)
T KOG2775|consen 235 NGKTYQ-----VKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIET 284 (397)
T ss_pred CCceec-----ceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEe
Confidence 211100 11123457899985 456554443 478999999999995
No 39
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.39 E-value=7.4e-12 Score=117.53 Aligned_cols=147 Identities=16% Similarity=0.221 Sum_probs=125.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcC----------CCCCCCCceeeeCCCCCccC
Q 013513 168 WVKSPAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRG----------AQRMAFNPVVGGGPNAAVIH 237 (441)
Q Consensus 168 ~vKs~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G----------~~~~~~~~~v~~G~~~~~~h 237 (441)
.+-++.-+..+|.|++|+.++++.+.+.+.||.+-.||+..-...+.++- -.+.+||+.++ .|.+..|
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Is--vnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSIS--VNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceec--ccceeec
Confidence 45667788899999999999999999999999999999987766654431 12568887665 6777889
Q ss_pred ccC----CCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHH
Q 013513 238 YSR----NDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGS-----FSSLEEALYDLILQTNKECLELCMPGTSLLQIH 308 (441)
Q Consensus 238 ~~~----~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~ 308 (441)
+.| .+-.|+.||+|.||+|+.++||.+.++.|++| +. .+....++..++..|.++++..++||.+-.+|.
T Consensus 92 ~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV-~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 92 FSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVV-GPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred cCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEe-ccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 888 25789999999999999999999999999999 44 346778899999999999999999999999999
Q ss_pred HHHHHHHHH
Q 013513 309 HYSVGMLRK 317 (441)
Q Consensus 309 ~a~~~~~~~ 317 (441)
+++.+.+..
T Consensus 171 ~~i~k~aas 179 (398)
T KOG2776|consen 171 RAIVKTAAS 179 (398)
T ss_pred HHHHHHHHH
Confidence 999888776
No 40
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.30 E-value=9.1e-13 Score=111.50 Aligned_cols=128 Identities=20% Similarity=0.252 Sum_probs=90.5
Q ss_pred HHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCCCCceEEEcCC---CCCCeEEE-EEcCCceEEEccCCCcccccccc
Q 013513 18 RRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQDANYLYITGC---QQPGGVAV-LSHECGLCMFMPETSAHDVIWKG 93 (441)
Q Consensus 18 R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~~~n~~yltG~---~~~~~~lv-v~~~~~~~l~~~~~~~~~~~w~~ 93 (441)
|++|+|+.|+++|+|+++.. ++.|++||||| ....++++ +++++. ++|++..+..... ..
T Consensus 1 Rl~rl~~~m~~~gid~lll~--------------~~~ni~YltG~~~~~~~~~~~l~i~~~~~-~l~~~~~~~~~~~-~~ 64 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLT--------------SPENIRYLTGFRWQPGERPVLLVITADGA-VLFVPKGEYERAA-EE 64 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEE--------------SHHHHHHHHS--ST-TSSEEEEEEESSSE-EEEEEGGGHHHHH-HH
T ss_pred CHHHHHHHHHHCCCCEEEEc--------------ChhhceEecCCCcCCCcceEEEEecccCc-EEEeccccHHHHH-Hh
Confidence 89999999999999654443 25899999999 55555555 888877 8889854432210 00
Q ss_pred cccCcccccccccCCcCCchhHHHHHHHHhhccCCceeecccccccchhHHHHHHhhccCCceeehHHHHhHhhcc
Q 013513 94 QIAGVDAAPETFKADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKADFYGAVRNLSRLTHELRWV 169 (441)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~i~~~R~v 169 (441)
. ... ........ +.+.+.+.|++++.+.++||++.+ .+++..++.|++.+|+.+++|+++++..+|+|
T Consensus 65 ~-~~~---~~v~~~~~--~~~~~~~~l~~~~~~~~~igve~~--~~~~~~~~~l~~~~~~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 65 S-APD---DEVVEYED--PYEAIAEALKKLGPEGKRIGVEPD--SLSAAEYQRLQEALPGAEFVDASPLIEELRMI 132 (132)
T ss_dssp H-TTS---SEEEEEST--HHHHHHHHHHHHTTTTSEEEEETT--TSBHHHHHHHHHHSTTSEEEEEHHHHHHHHTS
T ss_pred h-cCC---ceEEEEec--ccchHHHHHHHhCCCCCEEEEcCC--cChHHHHHHHHHhCCCCEEEEcHHHHHHcCcC
Confidence 0 000 01111111 577889999998777799999865 37788889999999999999999999999987
No 41
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=97.58 E-value=7.4e-05 Score=65.28 Aligned_cols=71 Identities=21% Similarity=0.371 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCc------EE---EEecCCcccccCCCCCCCCCCCceEEEcCCCCCCeEEEEEcCCceEEE
Q 013513 10 ISAEEYISRRKRLLEILPENS------VA---ILAAAPEKMMTDVVPYPYRQDANYLYITGCQQPGGVAVLSHECGLCMF 80 (441)
Q Consensus 10 ~~~~e~~~R~~rl~~~m~~~g------l~---~l~~~~~~~~~~~~~~~~~~~~n~~yltG~~~~~~~lvv~~~~~~~l~ 80 (441)
|+.+.|.+|+++|++.|++.. ++ ++++.+ .++..|. ++.+-..||+||..|+++++++++ ..+++
T Consensus 1 iD~~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~----~e~~~Y~-Ks~aLq~WLlGYEfpdTiiv~tk~-~i~~l 74 (163)
T PF14826_consen 1 IDKETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKA----DEDNPYS-KSTALQTWLLGYEFPDTIIVFTKK-KIHFL 74 (163)
T ss_dssp --HHHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S------TTSTT--HHHHHHHHHHSS--SSEEEEEETT-EEEEE
T ss_pred CCHHHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCc----ccCccch-hHHHHHHHHhcccHhhhhhhhcCC-EEEEE
Confidence 567899999999999998874 42 334321 1233332 455666899999999999999986 77777
Q ss_pred ccCCCc
Q 013513 81 MPETSA 86 (441)
Q Consensus 81 ~~~~~~ 86 (441)
+....+
T Consensus 75 tS~KKa 80 (163)
T PF14826_consen 75 TSKKKA 80 (163)
T ss_dssp EEHHHH
T ss_pred eCHHHH
Confidence 765443
No 42
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.38 E-value=0.0028 Score=59.18 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCC
Q 013513 278 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY 357 (441)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~ 357 (441)
+.+|++.+.+.++++++++.++||++..||..++.+.+.+ .|...... .+.. ++.... .|..-.-.-..+.
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~----~G~~~~~~--~~~~-~~~~~~--~~~~~~~~h~~~~ 72 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEE----HGAYPAPL--GYYG-FPKSIC--TSVNEVVCHGIPD 72 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----cCCCcccc--cCCC-CCccee--cCCCCceeCCCCC
Confidence 3578999999999999999999999999999987766654 55432100 0011 111111 1111000001235
Q ss_pred CCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 358 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 358 ~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
+.+|++|+++.++++....+ |...++.|+.|++
T Consensus 73 ~~~l~~Gd~v~id~g~~~~G----------Y~ad~~RT~~~G~ 105 (238)
T cd01086 73 DRVLKDGDIVNIDVGVELDG----------YHGDSARTFIVGE 105 (238)
T ss_pred CcccCCCCEEEEEEEEEECC----------EEEEEEEEEECCC
Confidence 78999999999999876544 6789999999975
No 43
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.32 E-value=0.0021 Score=64.38 Aligned_cols=120 Identities=13% Similarity=0.084 Sum_probs=78.8
Q ss_pred CeeeeeEEEeecCCCCC--HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCC
Q 013513 261 GYVSDMTRTWPPCGSFS--SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNP 338 (441)
Q Consensus 261 GY~~d~~Rt~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 338 (441)
..++++.|+..| ..+. +.+|++-+.+.++++++++.+|||++-.||..++++.+.+ .|..+... +|. .|+
T Consensus 126 ~~~~~~~~~~~I-Ksp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~----~Ga~ps~l--~y~-~fp 197 (396)
T PLN03158 126 EPNSDLQHSVEI-KTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIA----AGGYPSPL--NYH-FFP 197 (396)
T ss_pred ccccccccceee-CCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----cCCccccc--ccc-CCC
Confidence 335667777777 4544 4567888889999999999999999999999988776554 44222110 110 122
Q ss_pred CCccccCCCccccCCCCCCCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 339 TSIGHYLGMDVHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 339 ~~~Gh~iGl~~~e~p~~~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
..+. +|..-.-.-.++++.+|++|+++.++.+.+..+ |..-+..|++|++
T Consensus 198 ~svc--ts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~G----------Y~aD~tRT~~VG~ 247 (396)
T PLN03158 198 KSCC--TSVNEVICHGIPDARKLEDGDIVNVDVTVYYKG----------CHGDLNETFFVGN 247 (396)
T ss_pred ceee--ecccccccCCCCCCccCCCCCEEEEEEeEEECC----------EEEeEEeEEEcCC
Confidence 1111 111100001234678999999999999998765 5778999999964
No 44
>PRK05716 methionine aminopeptidase; Validated
Probab=96.96 E-value=0.011 Score=55.75 Aligned_cols=103 Identities=12% Similarity=0.102 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCCC
Q 013513 279 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYE 358 (441)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~~ 358 (441)
..|++.+.+.++++++++.++||++..||..++...+.+ .|...... ++..+.+. + ..|....-.-..+++
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~----~G~~~~~~--~~~~~~~~-~--~~g~~~~~~h~~~~~ 83 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRD----QGAIPAPL--GYHGFPKS-I--CTSVNEVVCHGIPSD 83 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH----CCCEeccc--CCCCCCcC-e--EecccceeecCCCCC
Confidence 356788889999999999999999999999988776655 44322110 00011000 0 011110000012367
Q ss_pred CCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 359 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 359 ~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
.+|++|+++.++.+....+ |..-+.-|+.|.+
T Consensus 84 ~~l~~Gd~v~id~g~~~~g----------Y~~d~~RT~~vG~ 115 (252)
T PRK05716 84 KVLKEGDIVNIDVTVIKDG----------YHGDTSRTFGVGE 115 (252)
T ss_pred cccCCCCEEEEEEEEEECC----------EEEEeEEEEECCC
Confidence 8999999999999887643 7889999999853
No 45
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.95 E-value=0.0058 Score=57.04 Aligned_cols=100 Identities=17% Similarity=0.210 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCC--CCCC
Q 013513 280 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS--VVTY 357 (441)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p--~~~~ 357 (441)
+|++.+.+++.++.+..++|||+|..||++++++..-+ .|.-++.- +|.. ||+++--++ .|-. .|++
T Consensus 125 mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ie----rg~YPSPL--nYy~-FPKS~CTSV----NEviCHGIPD 193 (369)
T KOG2738|consen 125 MRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIE----RGAYPSPL--NYYG-FPKSVCTSV----NEVICHGIPD 193 (369)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHh----cCCcCCCc--ccCC-Cchhhhcch----hheeecCCCC
Confidence 45677788899999999999999999999999887654 56554432 3322 222222111 1111 1457
Q ss_pred CCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 358 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 358 ~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
.++||.|..+.|...+|..+. ---+.+|++|.+
T Consensus 194 ~RpLedGDIvNiDVtvY~~Gy----------HGDlneTffvG~ 226 (369)
T KOG2738|consen 194 SRPLEDGDIVNIDVTVYLNGY----------HGDLNETFFVGN 226 (369)
T ss_pred cCcCCCCCEEeEEEEEEeccc----------cCccccceEeec
Confidence 899999999999999998763 334677888875
No 46
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.74 E-value=0.016 Score=54.67 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=72.6
Q ss_pred eEEEeecCCCCCH--HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccc
Q 013513 266 MTRTWPPCGSFSS--LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGH 343 (441)
Q Consensus 266 ~~Rt~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh 343 (441)
-+|++.| ..+.+ ..|++.+.+.+++.++++.++||++-.||...+...+.+ .|...... .+.. |+..+.
T Consensus 4 ~~~~~~v-Ks~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~----~G~~~~~~--~~~~-~~~~~~- 74 (255)
T PRK12896 4 EGRGMEI-KSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEE----HGAIPSPE--GYYG-FPGSTC- 74 (255)
T ss_pred cCCceeE-CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH----CCCEeCcc--cCCC-CCcceE-
Confidence 4677777 33333 456777888888888899999999999999988766654 45432110 0101 111111
Q ss_pred cCCCccccCCCCCCCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 344 YLGMDVHDSSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 344 ~iGl~~~e~p~~~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
.|....-.-..+++.+|++|.++.++.+....+ |..-+.-|++|.+
T Consensus 75 -~~~n~~~~h~~p~~~~l~~Gd~v~iD~g~~~~g----------Y~aD~~RT~~vG~ 120 (255)
T PRK12896 75 -ISVNEEVAHGIPGPRVIKDGDLVNIDVSAYLDG----------YHGDTGITFAVGP 120 (255)
T ss_pred -ecCCCeeEecCCCCccCCCCCEEEEEEeEEECc----------EEEeeEEEEECCC
Confidence 111100000123568899999999999886554 6788899998864
No 47
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.65 E-value=0.023 Score=54.74 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCC
Q 013513 278 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTY 357 (441)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~ 357 (441)
+..+++-+.+.++++++++.++||++..||...+.+.+.+ .|... -|+..++-. ....|-.|...+
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~----~G~~~---------afp~~is~n-~~~~H~~p~~~d 67 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRE----LGAGP---------AFPVNLSIN-ECAAHYTPNAGD 67 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH----cCCCC---------CCCceeccC-CEeeCCCCCCCC
Confidence 3568889999999999999999999999999988777665 33211 111111100 001122333334
Q ss_pred CCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 358 ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 358 ~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
+.+|++|+++.++.|....+ |..-+.-|+.|.+
T Consensus 68 ~~~l~~GDvV~iD~G~~~dG----------Y~sD~arT~~vg~ 100 (291)
T cd01088 68 DTVLKEGDVVKLDFGAHVDG----------YIADSAFTVDFDP 100 (291)
T ss_pred CcccCCCCEEEEEEEEEECC----------EEEEEEEEEecCh
Confidence 67899999999999987654 5677777887764
No 48
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=96.24 E-value=0.07 Score=47.98 Aligned_cols=95 Identities=17% Similarity=0.079 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCcc-----CCCcccCCCCe
Q 013513 176 KLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYS-----RNDQKIDDGDL 250 (441)
Q Consensus 176 ~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~-----~~~~~l~~gd~ 250 (441)
..++++.+.+.+++..+.+.++||++-.||...+...+.+.|... .+...++-|.. ...|-. .++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~-~~~~~~Gh~iG-~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGP-NFGHRTGHGIG-LEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccc-cCCCCCccccC-cccCCCCCcCCCCCCCcCCCCE
Confidence 467888899999999999999999999999999999999998731 11112221111 112222 25679999999
Q ss_pred EEEEEeeeEC-CeeeeeEEEeec
Q 013513 251 VLMDVGCELH-GYVSDMTRTWPP 272 (441)
Q Consensus 251 v~id~g~~~~-GY~~d~~Rt~~v 272 (441)
+.++.+.... ++..-+.-|++|
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~v 202 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLV 202 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEE
Confidence 9999998876 588888888887
No 49
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.09 E-value=0.083 Score=49.40 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCC-------CCCCccccCCCcccc
Q 013513 279 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNEL-------NPTSIGHYLGMDVHD 351 (441)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~-------~~~~~Gh~iGl~~~e 351 (441)
..|++-+.+.++++.+.+.++||++..||.+.+++++.+ .|..+..- +|..| ..+-+.||+
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~----~ga~pa~~--gy~g~~~~~ciSvNe~v~Hgi------ 80 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIRE----KGAYPAFL--GYKGFPFPTCISVNEVVAHGI------ 80 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH----cCceehhc--cCcCCCcceEeehhheeeecC------
Confidence 345666777788888889999999999999999888875 44333211 22220 122233443
Q ss_pred CCCCCCCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 352 SSVVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 352 ~p~~~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
|. ++.+|++|.++.|..++.+.|. -.-..-|+.|.+
T Consensus 81 -P~--d~~vlk~GDiv~IDvg~~~dG~----------~~Dsa~T~~vg~ 116 (255)
T COG0024 81 -PG--DKKVLKEGDIVKIDVGAHIDGY----------IGDTAITFVVGE 116 (255)
T ss_pred -CC--CCcccCCCCEEEEEEEEEECCe----------eeeEEEEEECCC
Confidence 43 6789999999999999988763 344566777774
No 50
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=95.58 E-value=0.19 Score=51.21 Aligned_cols=101 Identities=16% Similarity=0.071 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCC-CccccCCCCCCC
Q 013513 280 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLG-MDVHDSSVVTYE 358 (441)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iG-l~~~e~p~~~~~ 358 (441)
.+++-+.+..+++.+.+.++||++..||...+...+.+.+.+.|.... .-||..++ +. ...|-.|...++
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g-------~aFPt~vS--~N~~aaH~tP~~gd~ 231 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG-------WAFPTGCS--LNHCAAHYTPNTGDK 231 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc-------CCCCceee--cCccccCCCCCCCCC
Confidence 344555556667777788999999999999888777665444443211 11222111 11 012334544457
Q ss_pred CCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEc
Q 013513 359 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 399 (441)
Q Consensus 359 ~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVt 399 (441)
.+|++|.++.|..|..+.+ |-+-+.-||.|.
T Consensus 232 ~vLk~GDvVkID~G~~vdG----------YiaD~ArTv~vg 262 (470)
T PTZ00053 232 TVLTYDDVCKLDFGTHVNG----------RIIDCAFTVAFN 262 (470)
T ss_pred cEecCCCeEEEEEeEEECC----------EEEeEEEEEEeC
Confidence 8899999999999988765 577778888885
No 51
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.57 E-value=0.19 Score=48.56 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCC--CCCCccccCCCccccCCCCC
Q 013513 279 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNEL--NPTSIGHYLGMDVHDSSVVT 356 (441)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~~~Gh~iGl~~~e~p~~~ 356 (441)
..+++-+.+.++++.+++.++||++..||.+.+...+.+ .|... .|... ......| -.|...
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~----~g~~~-----aFp~~vs~n~~~~H-------~~p~~~ 70 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRE----LGAEP-----AFPCNISINECAAH-------FTPKAG 70 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHH----cCCCC-----CCCcceecCCEeeC-------CCCCCC
Confidence 456777888888999999999999999999988777765 34221 11110 1112223 334333
Q ss_pred CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 357 YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 357 ~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
++.+|++|.++.++.|....+ |..-+.-|+.|.+
T Consensus 71 d~~~l~~GDvV~iD~G~~~dG----------Y~aD~arT~~vG~ 104 (295)
T TIGR00501 71 DKTVFKDGDVVKLDLGAHVDG----------YIADTAITVDLGD 104 (295)
T ss_pred cCccCCCCCEEEEEEeEEECC----------EEEEEEEEEEeCc
Confidence 467899999999999887654 6788888998864
No 52
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=95.56 E-value=0.2 Score=45.41 Aligned_cols=94 Identities=14% Similarity=0.087 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCc-----cCCCcccCCCCeE
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHY-----SRNDQKIDDGDLV 251 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~-----~~~~~~l~~gd~v 251 (441)
.+|++.+.+.++++.+++.++||++-.||...+...+.+.|... .|...++-|.. ...|- ..++.+|++|.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~-~~~~~~Gh~iG-~~~~e~p~i~~~~~~~l~~gmv~ 181 (208)
T cd01092 104 ELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGE-YFIHRTGHGVG-LEVHEAPYISPGSDDVLEEGMVF 181 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccc-cCCCCCccccC-cccCcCCCcCCCCCCCcCCCCEE
Confidence 45678888889999999999999999999999999999998742 12211111110 11121 1257899999999
Q ss_pred EEEEeeeECCe-eeeeEEEeec
Q 013513 252 LMDVGCELHGY-VSDMTRTWPP 272 (441)
Q Consensus 252 ~id~g~~~~GY-~~d~~Rt~~v 272 (441)
.|+.+....|+ ..-+.-|++|
T Consensus 182 ~iep~~~~~~~~g~~~ed~v~v 203 (208)
T cd01092 182 TIEPGIYIPGKGGVRIEDDVLV 203 (208)
T ss_pred EECCeEEecCCCEEEeeeEEEE
Confidence 99988766443 4556777776
No 53
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=95.54 E-value=0.19 Score=50.43 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCc-----cccCCC
Q 013513 280 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMD-----VHDSSV 354 (441)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~-----~~e~p~ 354 (441)
.+++-+.+.++++.+++.++||++..||.+.+.+.+.+.+... +..... ++ .++++.+.+. .|-.|.
T Consensus 22 ~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~-~~~~~~--~~-----~g~afpt~vSvN~~v~H~~P~ 93 (389)
T TIGR00495 22 YKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKI-FKKEKE--ME-----KGIAFPTCISVNNCVGHFSPL 93 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhh-hccccc--cc-----CCCCCCeEEecCCeeeCCCCC
Confidence 4566677777888888999999999999999888887643210 000000 00 1111111111 122333
Q ss_pred CCC-CCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCC
Q 013513 355 VTY-ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 401 (441)
Q Consensus 355 ~~~-~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~ 401 (441)
..+ +.+|++|.++.|..|..+.+ |..-+..|++|.+.
T Consensus 94 ~~d~~~~Lk~GDvVkIDlG~~idG----------Y~aD~arTv~vG~~ 131 (389)
T TIGR00495 94 KSDQDYILKEGDVVKIDLGCHIDG----------FIALVAHTFVVGVA 131 (389)
T ss_pred CCCCCcCcCCCCEEEEEEEEEECC----------EEEEEEEEEEECCc
Confidence 222 47899999999999998765 78899999999753
No 54
>PRK08671 methionine aminopeptidase; Provisional
Probab=95.46 E-value=0.22 Score=48.02 Aligned_cols=97 Identities=18% Similarity=0.186 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCCC
Q 013513 279 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYE 358 (441)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~~ 358 (441)
..+++-+.+.++.+.+.+.++||++..||...+.+.+.+ .|... .|+..++-+- ...|-.|.-.++
T Consensus 4 ~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~----~g~~~---------afp~~vs~n~-~~~H~~p~~~d~ 69 (291)
T PRK08671 4 KYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRE----LGAKP---------AFPCNISINE-VAAHYTPSPGDE 69 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH----cCCcc---------CCCCEEeeCC-CccCCCCCCCCC
Confidence 467888889999999999999999999999988777765 33211 1121111000 012333433346
Q ss_pred CCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEc
Q 013513 359 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 399 (441)
Q Consensus 359 ~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVt 399 (441)
.+|++|.++.++.|....+ |..-+.-|+.+.
T Consensus 70 ~~l~~GDvV~iD~G~~~dG----------Y~aD~arT~~vG 100 (291)
T PRK08671 70 RVFPEGDVVKLDLGAHVDG----------YIADTAVTVDLG 100 (291)
T ss_pred cccCCCCEEEEEEeEEECC----------EEEEEEEEEEeC
Confidence 7899999999999887654 677888899887
No 55
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=95.31 E-value=0.22 Score=46.22 Aligned_cols=94 Identities=13% Similarity=-0.056 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCC-C--CceeeeCCCCCccCc------cCCCcccCCC
Q 013513 178 MRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMA-F--NPVVGGGPNAAVIHY------SRNDQKIDDG 248 (441)
Q Consensus 178 ~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~-~--~~~v~~G~~~~~~h~------~~~~~~l~~g 248 (441)
.|++.+++.++++.+++.++||++-.||.++++..+.+.|..... + ..-+....+. .+|. ..++.+|++|
T Consensus 111 ~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~GHgiGl~~he-~~~~~g~~~~~~~~~~Le~G 189 (228)
T cd01090 111 HLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYGHSFGVLSHY-YGREAGLELREDIDTVLEPG 189 (228)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccCccccccccc-CCCccccccCCCCCCccCCC
Confidence 567788889999999999999999999999999999999865321 0 0011111111 1111 1235889999
Q ss_pred CeEEEEEeeeEC----C-eeeeeEEEeec
Q 013513 249 DLVLMDVGCELH----G-YVSDMTRTWPP 272 (441)
Q Consensus 249 d~v~id~g~~~~----G-Y~~d~~Rt~~v 272 (441)
.++.++.+..+. | .-.-+..|++|
T Consensus 190 MV~~iEP~i~~~~~~~g~gG~ried~v~V 218 (228)
T cd01090 190 MVVSMEPMIMLPEGQPGAGGYREHDILVI 218 (228)
T ss_pred CEEEECCEEeecccCCCCcEEEeeeEEEE
Confidence 999999987652 2 23347788877
No 56
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=95.30 E-value=0.31 Score=45.14 Aligned_cols=105 Identities=13% Similarity=0.207 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCccc-CCCCCCCC--CC--CCCCccccCCCccccCC
Q 013513 279 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVN-SDGTDPYN--EL--NPTSIGHYLGMDVHDSS 353 (441)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~-~~~~~~~~--~~--~~~~~Gh~iGl~~~e~p 353 (441)
..|++-+.+.++++.+++.++||++-.||...+.+.+.+.+... +.. .....++. .. .....+|+ .|
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~-~~~~~~g~~g~~~~~~v~~n~~~~H~-------~p 74 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKV-YKKEKKLEKGIAFPTCISVNNCVCHF-------SP 74 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-ccCcccccCCCCcCeEeccCceeecC-------CC
Confidence 56788899999999999999999999999888777777643211 000 00000000 00 00112233 22
Q ss_pred CC-CCCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCC
Q 013513 354 VV-TYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITET 401 (441)
Q Consensus 354 ~~-~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~ 401 (441)
.. .++.+|++|.++.++.+....+ |..-+.-|+.|.+-
T Consensus 75 ~~~~~~~~l~~Gd~v~iD~g~~~~G----------Y~sD~tRT~~vG~~ 113 (228)
T cd01089 75 LKSDATYTLKDGDVVKIDLGCHIDG----------YIAVVAHTIVVGAE 113 (228)
T ss_pred CCCCCCcccCCCCEEEEEEEEEECC----------EEEEEEEEEEeCCc
Confidence 22 3577899999999999887654 68889999999743
No 57
>PRK12897 methionine aminopeptidase; Reviewed
Probab=94.85 E-value=0.52 Score=44.22 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCCCC
Q 013513 280 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYER 359 (441)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~~~ 359 (441)
.|++-+.+.++++++.+.++||++-.||...+...+.+ +|...... ++.. ++..+. .|....-.-..+++.
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~----~G~~~~~~--~~~~-~~~~i~--~g~n~~~~H~~p~~~ 83 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEK----HGATSEQK--GYNG-YPYAIC--ASVNDEMCHAFPADV 83 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHH----cCCccccc--ccCC-CCcceE--eccCCEeecCCCCCc
Confidence 34566667777888889999999999999988777665 44331100 1111 111111 111111111234678
Q ss_pred CcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEc
Q 013513 360 PLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 399 (441)
Q Consensus 360 ~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVt 399 (441)
+|++|.++.++.+....+ |..-+.-|+.|.
T Consensus 84 ~l~~Gd~V~iD~g~~~~G----------Y~sD~tRT~~vG 113 (248)
T PRK12897 84 PLTEGDIVTIDMVVNLNG----------GLSDSAWTYRVG 113 (248)
T ss_pred ccCCCCEEEEEeeEEECC----------EEEEEEEEEEcC
Confidence 899999999998875543 678888999884
No 58
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=94.77 E-value=0.49 Score=44.29 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCC-CCCCC
Q 013513 280 EEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSS-VVTYE 358 (441)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p-~~~~~ 358 (441)
.|++-+.+.++++++.+.++||++-.||...+...+.+ .|...... ++.. ++..+ ..|... ..| ..+++
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~----~G~~~~~~--~~~~-~~~~~--~~~~n~-~~~H~~~~~ 81 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEK----HGAKPAFL--GYYG-FPGSV--CISVNE-VVIHGIPDK 81 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHH----CCCCcccc--CCCC-CCcee--Eecccc-EEEecCCCC
Confidence 44666677777788888999999999999887666654 44321100 0110 11111 112110 011 12368
Q ss_pred CCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcC
Q 013513 359 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITE 400 (441)
Q Consensus 359 ~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte 400 (441)
.+|++|.++.++.+....+ |..-+.-|+.|.+
T Consensus 82 ~~l~~Gd~v~iD~g~~~~g----------Y~aD~~RT~~vG~ 113 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDG----------YHGDTAKTFLVGK 113 (247)
T ss_pred cccCCCCEEEEEEEEEECC----------EEEEEEEEEEcCC
Confidence 8999999999998875433 7888899999864
No 59
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=94.75 E-value=0.3 Score=44.30 Aligned_cols=98 Identities=16% Similarity=0.159 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHH-HHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCC
Q 013513 278 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGM-LRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVT 356 (441)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~ 356 (441)
+..|++-+.+.++.+++++.++||++-.||...+.+. +.+ .|.... .++..++ .|....-..+.+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~----~g~~~~--------~~~~~~~--~g~~~~~~~~~~ 66 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRR----HGGEEP--------AFPPIVG--SGPNTDLPHYTP 66 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHH----TTTTEE--------SSESEEE--ECCCCGETTTBC
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH----cCCCcc--------cCCceEe--cCCcceecceec
Confidence 3568899999999999999999999999999998776 333 332110 0111111 111110011123
Q ss_pred CCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEc
Q 013513 357 YERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 399 (441)
Q Consensus 357 ~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVt 399 (441)
++.+|++|+++.++-+....+ +..-+.-|+++.
T Consensus 67 ~~~~l~~gd~v~id~~~~~~g----------y~~d~~Rt~~~G 99 (207)
T PF00557_consen 67 TDRRLQEGDIVIIDFGPRYDG----------YHADIARTFVVG 99 (207)
T ss_dssp CSSBESTTEEEEEEEEEEETT----------EEEEEEEEEESS
T ss_pred cceeeecCCcceeeccceeee----------eEeeeeeEEEEe
Confidence 688899999999998876654 688899999874
No 60
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=94.54 E-value=0.28 Score=45.91 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-CCCceeee--CC--CCCccCccC-CCcccCCCCe
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRM-AFNPVVGG--GP--NAAVIHYSR-NDQKIDDGDL 250 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~-~~~~~v~~--G~--~~~~~h~~~-~~~~l~~gd~ 250 (441)
..|++.+++.++.+++++.++||++-.||...+...+.+.|.+.. .|..-++. |- +.......+ ++++|++|.+
T Consensus 120 ~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GMv 199 (243)
T cd01091 120 EQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGMV 199 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCccccCCCCCCCcCCCCE
Confidence 455677888888999999999999999999999888887753211 12111211 11 111111112 4688999999
Q ss_pred EEEEEeee-E----------CCeeeeeEEEeec
Q 013513 251 VLMDVGCE-L----------HGYVSDMTRTWPP 272 (441)
Q Consensus 251 v~id~g~~-~----------~GY~~d~~Rt~~v 272 (441)
+.+..|.. . +.|..-++-|+.|
T Consensus 200 f~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~V 232 (243)
T cd01091 200 FNLSIGFSNLQNPEPKDKESKTYALLLSDTILV 232 (243)
T ss_pred EEEeCCcccccCccccCccCCeeEEEEEEEEEE
Confidence 99999975 2 2688889999988
No 61
>PRK12318 methionine aminopeptidase; Provisional
Probab=94.20 E-value=0.53 Score=45.36 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceee--eCCC----CCccCccC-CCcccCCCC
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVG--GGPN----AAVIHYSR-NDQKIDDGD 249 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~--~G~~----~~~~h~~~-~~~~l~~gd 249 (441)
..|++.+++.++++.+++.++||++-.||..++...+.+.|..... ..+. .|.. ..++++.+ .+.+|++|.
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~--~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GM 236 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVD--QFVGHGVGIKFHENPYVPHHRNSSKIPLAPGM 236 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCC--CcccCCcCccccCCCcccCcCCCCCCEeCCCC
Confidence 3567788888999999999999999999999999999998875221 1111 1111 11112222 246799999
Q ss_pred eEEEEEeeeEC
Q 013513 250 LVLMDVGCELH 260 (441)
Q Consensus 250 ~v~id~g~~~~ 260 (441)
++.|+.+....
T Consensus 237 V~~iEP~i~~~ 247 (291)
T PRK12318 237 IFTIEPMINVG 247 (291)
T ss_pred EEEECCEEEcC
Confidence 99999776553
No 62
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=93.96 E-value=0.64 Score=46.84 Aligned_cols=95 Identities=9% Similarity=0.002 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCC------ccCccC-CCcccCCCC
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAA------VIHYSR-NDQKIDDGD 249 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~------~~h~~~-~~~~l~~gd 249 (441)
.++++.+++.++.+++++.++||++-.||..++...+.+.|.... +.+--..|.... .+.-.+ ++.+|++|.
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~-h~~GhgiGl~~~~~~~e~~~~l~~~~~~~L~~GM 349 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD-SRTGYPIGLSYPPDWGERTMSLRPGDNTVLKPGM 349 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC-CCceeeeccCcCCCCCCccccccCCCCceecCCC
Confidence 466788899999999999999999999999999999999887531 110011121110 001112 467899999
Q ss_pred eEEEEEeeeECCeeeeeEEEeec
Q 013513 250 LVLMDVGCELHGYVSDMTRTWPP 272 (441)
Q Consensus 250 ~v~id~g~~~~GY~~d~~Rt~~v 272 (441)
++.++.|....|+..-+.-|++|
T Consensus 350 v~tvEpgiy~~~~Gvried~v~V 372 (391)
T TIGR02993 350 TFHFMTGLWMEDWGLEITESILI 372 (391)
T ss_pred EEEEcceeEeCCCCeEEeeEEEE
Confidence 99999998777766677788887
No 63
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=93.69 E-value=0.95 Score=42.24 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCCC
Q 013513 279 LEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYE 358 (441)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~~ 358 (441)
..|++-+.+.++..++.+.++||++-.||...+...+.+ .|... .++..++-| -...-+-..+++
T Consensus 3 ~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~----~G~~~---------~~~~~v~~g--~~~~~~H~~~~~ 67 (243)
T cd01087 3 LMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRS----RGARL---------AYSYIVAAG--SNAAILHYVHND 67 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHH----cCCCc---------CCCCeEEEC--CCccccCCCcCC
Confidence 467888999999999999999999999999988766654 44221 011111111 111111122357
Q ss_pred CCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEc
Q 013513 359 RPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 399 (441)
Q Consensus 359 ~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVt 399 (441)
.+|++|.++.++.+....+ |-.-+.-|+.|.
T Consensus 68 ~~l~~Gd~v~vD~g~~~~G----------Y~ad~~Rt~~vg 98 (243)
T cd01087 68 QPLKDGDLVLIDAGAEYGG----------YASDITRTFPVN 98 (243)
T ss_pred CcCCCCCEEEEEeCceECC----------EeeeeeEEEEeC
Confidence 8899999999998776543 677888888873
No 64
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=93.26 E-value=0.66 Score=43.73 Aligned_cols=88 Identities=20% Similarity=0.165 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCcc-----ccC
Q 013513 278 SLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDV-----HDS 352 (441)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~-----~e~ 352 (441)
.+.+++.++-+++...+.+.+|||++.-||.+.+....++.+.+-|+.. ++|...|+.. |-.
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~a-------------Gi~FPtG~SlN~cAAHyT 152 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNA-------------GIGFPTGCSLNHCAAHYT 152 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccc-------------cccCCCcccccchhhhcC
Confidence 3445566666777778889999999999999999888777666666543 3444445433 334
Q ss_pred CCCCCCCCcCCCcEEEeCcceeeCCC
Q 013513 353 SVVTYERPLEPGVVITIEPGIYIPLS 378 (441)
Q Consensus 353 p~~~~~~~l~~Gmv~~iep~~~~~~~ 378 (441)
|..++.++|+...|.-|.-|..+.+.
T Consensus 153 pNaGd~tVLqydDV~KiDfGthi~Gr 178 (397)
T KOG2775|consen 153 PNAGDKTVLKYDDVMKIDFGTHIDGR 178 (397)
T ss_pred CCCCCceeeeecceEEEeccccccCe
Confidence 55567899999999999888776654
No 65
>PRK09795 aminopeptidase; Provisional
Probab=93.19 E-value=1.3 Score=44.11 Aligned_cols=99 Identities=15% Similarity=0.064 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccC-----CCcccC
Q 013513 172 PAELKLMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSR-----NDQKID 246 (441)
Q Consensus 172 ~~Ei~~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~-----~~~~l~ 246 (441)
+++-+.++++.+++.++...+++.++||++-.||.+.++..+.+.|... .|...++-|.. .-.|-.| ++.+|+
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~-~~~h~~GHgiG-l~~he~p~i~~~~~~~l~ 313 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGD-YFGHNTGHAIG-IEVHEDPRFSPRDTTTLQ 313 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCc-cCCCCCCccCC-ccccCCCCcCCCCCCCcC
Confidence 5554567889999999999999999999999999999999999988642 22211111111 1122222 468899
Q ss_pred CCCeEEEEEeeeECCe-eeeeEEEeec
Q 013513 247 DGDLVLMDVGCELHGY-VSDMTRTWPP 272 (441)
Q Consensus 247 ~gd~v~id~g~~~~GY-~~d~~Rt~~v 272 (441)
+|.++.|+.|....|. -.-+.-|++|
T Consensus 314 ~gmv~~iEpgiy~~~~~gvriEd~v~v 340 (361)
T PRK09795 314 PGMLLTVEPGIYLPGQGGVRIEDVVLV 340 (361)
T ss_pred CCCEEEECCEEEeCCCCEEEEeeEEEE
Confidence 9999999998876543 3556677777
No 66
>PRK15173 peptidase; Provisional
Probab=92.95 E-value=1.2 Score=43.52 Aligned_cols=94 Identities=7% Similarity=-0.107 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceee--eC----CCCCccCcc-CCCcccCCCC
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVG--GG----PNAAVIHYS-RNDQKIDDGD 249 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~--~G----~~~~~~h~~-~~~~~l~~gd 249 (441)
..|++.+++.++++.+++.++||++-.||...+...+.+.|.... +...+. .| ... .+... .++.+|++|.
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~-~~~~~GHGiG~~lg~~E-~P~i~~~~~~~Le~GM 280 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNY-NRGHLGHGNGVFLGLEE-SPFVSTHATESFTSGM 280 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-cCCCCCCcCCCCCCcCC-CCCCCCCCCCccCCCC
Confidence 456788888999999999999999999999999999999886421 111111 11 111 11111 2457899999
Q ss_pred eEEEEEeeeECC-eeeeeEEEeec
Q 013513 250 LVLMDVGCELHG-YVSDMTRTWPP 272 (441)
Q Consensus 250 ~v~id~g~~~~G-Y~~d~~Rt~~v 272 (441)
++.++.|....| +..-+.-|+.|
T Consensus 281 V~tiEPgiy~~g~ggvriEDtvlV 304 (323)
T PRK15173 281 VLSLETPYYGYNLGSIMIEDMILI 304 (323)
T ss_pred EEEECCEEEcCCCcEEEEeeEEEE
Confidence 999998875433 34567888877
No 67
>PRK07281 methionine aminopeptidase; Reviewed
Probab=92.78 E-value=0.99 Score=43.36 Aligned_cols=79 Identities=13% Similarity=0.192 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCcc---------CCCcccCCC
Q 013513 178 MRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYS---------RNDQKIDDG 248 (441)
Q Consensus 178 ~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~---------~~~~~l~~g 248 (441)
.|++.+++.+++.++++.++||++-.||..+++..+.+.|... +...++-|-- .-.|-. ..+.+|++|
T Consensus 150 ~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~--~~~~~GHGIG-l~~hE~P~i~~~~~~~~~~~Le~G 226 (286)
T PRK07281 150 VKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV--VRDLVGHGVG-PTMHEEPMVPNYGTAGRGLRLREG 226 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc--CCCeeeeeCC-CccCCCCcCCCcccCCCCCEECCC
Confidence 5788889999999999999999999999999999998887642 2222222111 111221 135689999
Q ss_pred CeEEEEEeeeE
Q 013513 249 DLVLMDVGCEL 259 (441)
Q Consensus 249 d~v~id~g~~~ 259 (441)
.++.|..+...
T Consensus 227 MV~tiEPgiy~ 237 (286)
T PRK07281 227 MVLTIEPMINT 237 (286)
T ss_pred CEEEECCeeEc
Confidence 99999988854
No 68
>PRK14575 putative peptidase; Provisional
Probab=92.54 E-value=1.4 Score=44.57 Aligned_cols=94 Identities=7% Similarity=-0.127 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCce----eee--CCCCCccCcc-CCCcccCCCC
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPV----VGG--GPNAAVIHYS-RNDQKIDDGD 249 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~----v~~--G~~~~~~h~~-~~~~~l~~gd 249 (441)
..|++.+++.++...+++.++||++-.||.+++...+.+.|.... +... ++. |.... +... .++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~~GHGiG~~lg~~e~-P~i~~~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNY-NRGHLGHGNGVFLGLEES-PFVSTHATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-cCCCCCCcccCCCCCccC-CCCCCCCCCCcCCCC
Confidence 356778888899999999999999999999999999999887421 1111 110 11110 1111 2457899999
Q ss_pred eEEEEEeeeECC-eeeeeEEEeec
Q 013513 250 LVLMDVGCELHG-YVSDMTRTWPP 272 (441)
Q Consensus 250 ~v~id~g~~~~G-Y~~d~~Rt~~v 272 (441)
++.++.|....| +..-+.-|+.|
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlV 387 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILI 387 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEE
Confidence 999998875533 34667888887
No 69
>PRK14576 putative endopeptidase; Provisional
Probab=92.38 E-value=1.6 Score=44.27 Aligned_cols=94 Identities=10% Similarity=-0.080 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceee--eC----CCCCccCccC-CCcccCCCC
Q 013513 177 LMRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVG--GG----PNAAVIHYSR-NDQKIDDGD 249 (441)
Q Consensus 177 ~~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~--~G----~~~~~~h~~~-~~~~l~~gd 249 (441)
..+++.+++.++++++++.++||++-.||..++...+.+.|.... +...+. .| ... .+...+ ++.+|++|.
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~-~~~~~GHgiG~~l~~~e-~P~i~~~~~~~Le~GM 362 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHY-NRGHLGHGDGVFLGLEE-VPFVSTQATETFCPGM 362 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccc-cCCCCCCCCCCCCCcCc-CCCcCCCCCCccCCCC
Confidence 466788888999999999999999999999999999999987421 111111 11 111 122222 467899999
Q ss_pred eEEEEEeeeECC-eeeeeEEEeec
Q 013513 250 LVLMDVGCELHG-YVSDMTRTWPP 272 (441)
Q Consensus 250 ~v~id~g~~~~G-Y~~d~~Rt~~v 272 (441)
++.++.+....| ...-+.-|+.|
T Consensus 363 v~~vEp~~y~~g~ggvriEDtvlV 386 (405)
T PRK14576 363 VLSLETPYYGIGVGSIMLEDMILI 386 (405)
T ss_pred EEEECCceeecCCCEEEEeeEEEE
Confidence 999997654433 33456778877
No 70
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=90.31 E-value=2.7 Score=42.15 Aligned_cols=94 Identities=16% Similarity=0.077 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCC-CCccCccC------CCcccCCCCe
Q 013513 178 MRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPN-AAVIHYSR------NDQKIDDGDL 250 (441)
Q Consensus 178 ~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~-~~~~h~~~------~~~~l~~gd~ 250 (441)
.|+...++.++++++++.++||++-.|+.+..+..+.+.|... .|..-.+-|-. ..-.|-.| ++.+|++|.+
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~-~~~h~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GMv 342 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGL-YFLHGTGHGVGFVLDVHEHPQYLSPGSDTTLEPGMV 342 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcc-cccCCccccCCCCcccCcCccccCCCCCccccCCcE
Confidence 4577888999999999999999999999999999999965532 22111111111 11223333 4679999999
Q ss_pred EEEEEeeeE-CCeeeeeEEEeec
Q 013513 251 VLMDVGCEL-HGYVSDMTRTWPP 272 (441)
Q Consensus 251 v~id~g~~~-~GY~~d~~Rt~~v 272 (441)
+.++.|..+ +.+-.-+.-+++|
T Consensus 343 ~t~Epg~y~~g~~GirIEd~vlV 365 (384)
T COG0006 343 FSIEPGIYIPGGGGVRIEDTVLV 365 (384)
T ss_pred EEeccccccCCCceEEEEEEEEE
Confidence 999999655 6789999999988
No 71
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=88.36 E-value=4 Score=37.67 Aligned_cols=100 Identities=15% Similarity=-0.048 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC--CChHHHHHHHHHHHHHHHHhcCcccCCCCCCCC-CCCCCCccccCC-CccccCC
Q 013513 278 SLEEALYDLILQTNKECLELCMPG--TSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYN-ELNPTSIGHYLG-MDVHDSS 353 (441)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~rpG--~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~Gh~iG-l~~~e~p 353 (441)
..+.+.-..+.++++.+.+.++|| ++-.||...+.+.+.. .| ++. .-|+..+.-|.. ...|-.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~----~g--------~~~~~~f~~~v~~g~n~~~~H~~p 71 (224)
T cd01085 4 AAHIRDGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQ----QK--------GYVGLSFDTISGFGPNGAIVHYSP 71 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHH----cC--------CCcCCCcceEEEecCccCcCCCCc
Confidence 344555566678888899999999 9999999988765543 22 110 011222221110 1122222
Q ss_pred CCCCCCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEc
Q 013513 354 VVTYERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLIT 399 (441)
Q Consensus 354 ~~~~~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVt 399 (441)
.-..+.+|++|.++.++.+....+ |-.-+.-|++|.
T Consensus 72 ~~~~~r~l~~GD~V~iD~g~~~~g----------Y~aD~~RT~~vG 107 (224)
T cd01085 72 TEESNRKISPDGLYLIDSGGQYLD----------GTTDITRTVHLG 107 (224)
T ss_pred CcccCcccCCCCEEEEEeCccCCC----------cccccEEeecCC
Confidence 111278999999999998876543 556677788774
No 72
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=86.20 E-value=1.7 Score=44.96 Aligned_cols=119 Identities=13% Similarity=0.247 Sum_probs=66.3
Q ss_pred HHHHHHHhCCCCcEEEEecCCcccccCCCCCCCCC--CCceEEEcCCCCCCeEEEEEcCCceEEEccCCCcccccccccc
Q 013513 18 RRKRLLEILPENSVAILAAAPEKMMTDVVPYPYRQ--DANYLYITGCQQPGGVAVLSHECGLCMFMPETSAHDVIWKGQI 95 (441)
Q Consensus 18 R~~rl~~~m~~~gl~~l~~~~~~~~~~~~~~~~~~--~~n~~yltG~~~~~~~lvv~~~~~~~l~~~~~~~~~~~w~~~~ 95 (441)
++.|+++.|+..++++++.-. +++....|.. +.-..|++||..+.++.+++. .++.|+++.. + |....
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps----~DaH~sEy~~~~D~R~~flsGFsGsag~Avit~-~~a~lwtD~R---Y--~~QA~ 80 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPS----TDAHQSEYIADRDERRAFLSGFSGSAGTAVITE-EEAALWTDGR---Y--FQQAE 80 (606)
T ss_pred HHHHHHHHhcCCCceEEEccC----CchhhhhhhcchhhhhhhhcccCCCcceEEEec-CcceEEEccH---H--HHHHH
Confidence 778999999999996543311 1111111111 234479999999988989985 5777878652 1 11111
Q ss_pred cCccccccccc-CCcCCchhHHHHHHHHhhccCCceeecccccccchhHHHHHHhhc
Q 013513 96 AGVDAAPETFK-ADKAYPMSKIQEILPDMIGRSSKLFHNQETAVQTYTNLEAFQKAD 151 (441)
Q Consensus 96 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~igv~~~~~~~~~~~~~~l~~~~ 151 (441)
...+. .|. .....+...+.++|.+.+...++||+|.. -.++..+..+.+.+
T Consensus 81 ~qld~---~W~l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~--Lis~~~~~~~~~~l 132 (606)
T KOG2413|consen 81 QQLDS---NWTLMKMGEDVPTVEEWLAKVLPEGSRVGIDPT--LISFDAWKQLEKSL 132 (606)
T ss_pred hhhcc---cceeeeccCCCccHHHHHHHhCCCccccccCcc--eechhHHHhHHHHH
Confidence 11111 010 00111123466777777777889999753 34555555444433
No 73
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=83.84 E-value=9.6 Score=37.15 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCcc-----ccCCCC
Q 013513 281 EALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDV-----HDSSVV 355 (441)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~-----~e~p~~ 355 (441)
+-+=+.+..+....++.++||++..||.......+.+..... |.. .+-+-.++....-+.+ |=.|..
T Consensus 25 k~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~ki-YK~-------eK~~~KGIAfPT~Isvnncv~h~sPlk 96 (398)
T KOG2776|consen 25 KMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKI-YKK-------EKDFEKGIAFPTSISVNNCVCHFSPLK 96 (398)
T ss_pred hhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHH-Hhh-------hhhhhccccccceecccceeeccCcCC
Confidence 344556677778888999999999999888776665532110 000 0011122222211111 224544
Q ss_pred CC-CCCcCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEEcCCCccccC
Q 013513 356 TY-ERPLEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLITETGYEVLT 407 (441)
Q Consensus 356 ~~-~~~l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlVte~G~e~Lt 407 (441)
.+ +..|++|.|+-|.-|+.+.| |-..+.+|++|++.---.+|
T Consensus 97 sd~~~~Lk~GDvVKIdLG~HiDG----------fiA~vaHT~VV~~~~~~~vt 139 (398)
T KOG2776|consen 97 SDADYTLKEGDVVKIDLGVHIDG----------FIALVAHTIVVGPAPDTPVT 139 (398)
T ss_pred CCCcccccCCCEEEEEeeeeecc----------ceeeeeeeEEeccCCCCccc
Confidence 44 78999999999999999876 68899999999875433444
No 74
>PRK10879 proline aminopeptidase P II; Provisional
Probab=81.45 E-value=22 Score=36.36 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcCcccCCCCCCCCCCCCCCccccCCCccccCCCCCCCCC
Q 013513 281 EALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRKGLKEIGIVNSDGTDPYNELNPTSIGHYLGMDVHDSSVVTYERP 360 (441)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~Gh~iGl~~~e~p~~~~~~~ 360 (441)
|++-+.+..++.++++.++||++=.+|...+...+.+ .|.... .++..++-|. ...-.-+.+++.+
T Consensus 183 r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~----~G~~~~--------~~~~iv~~G~--na~~~H~~~~~~~ 248 (438)
T PRK10879 183 RRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNR----HGARYP--------SYNTIVGSGE--NGCILHYTENESE 248 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH----CCCCCC--------CCCcEEEEcC--ccccccCCCCccc
Confidence 3556667777888889999999999998876655544 453211 1111222211 1000112236788
Q ss_pred cCCCcEEEeCcceeeCCCCCCCCccceeeEEEeEeEEE
Q 013513 361 LEPGVVITIEPGIYIPLSFSGPERFRGIGIRIEDEVLI 398 (441)
Q Consensus 361 l~~Gmv~~iep~~~~~~~~~~~~~~~~~g~~~ed~vlV 398 (441)
|++|.++.+..|....+ |..-+.-|+.|
T Consensus 249 l~~GDlVliD~G~~~~G----------Y~sDitRT~~v 276 (438)
T PRK10879 249 MRDGDLVLIDAGCEYKG----------YAGDITRTFPV 276 (438)
T ss_pred cCCCCEEEEEeCeEECC----------EEEEeEEEEEE
Confidence 99999999998876543 67888899988
No 75
>PRK13607 proline dipeptidase; Provisional
Probab=66.50 E-value=33 Score=35.18 Aligned_cols=35 Identities=9% Similarity=-0.171 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Q 013513 179 RESASIGCQALLQTMLHSKSHPYEGLLAAKFEYEC 213 (441)
Q Consensus 179 r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~ 213 (441)
++..+++.++.+++++.++||++-.||..+....+
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i 305 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRI 305 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 36778889999999999999999999987765443
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=53.42 E-value=43 Score=35.31 Aligned_cols=70 Identities=13% Similarity=0.070 Sum_probs=48.9
Q ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCC-CCCCceeeeCC----CC-CccCccCCCcccCCCCeEEEEEe
Q 013513 187 QALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQR-MAFNPVVGGGP----NA-AVIHYSRNDQKIDDGDLVLMDVG 256 (441)
Q Consensus 187 ~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~-~~~~~~v~~G~----~~-~~~h~~~~~~~l~~gd~v~id~g 256 (441)
...+..+..++||.+-.+|...+...+.+.|-+- +.|...++++. +. ..+...-++|+||+|+++.|.+|
T Consensus 309 ~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis~g 384 (1001)
T COG5406 309 MLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNISLG 384 (1001)
T ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceeccCCceeccccEEEEeec
Confidence 3345566689999999999999999998888663 23332333322 21 23334457799999999999996
No 77
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=48.68 E-value=97 Score=33.58 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC-CCCceeeeC------CCCCccCccCCCcccCCCCe
Q 013513 178 MRESASIGCQALLQTMLHSKSHPYEGLLAAKFEYECKMRGAQRM-AFNPVVGGG------PNAAVIHYSRNDQKIDDGDL 250 (441)
Q Consensus 178 ~r~Aa~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~~~~G~~~~-~~~~~v~~G------~~~~~~h~~~~~~~l~~gd~ 250 (441)
|.++...--++..+++..++||.+-.+|...+...+.+.+-+-. .|.-.+++| .++.. -..-++++|++|++
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~-inaKnd~~lk~gmv 337 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLV-INAKNDRVLKKGMV 337 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccc-ccccchhhhccCcE
Confidence 45666677777888889999999999999999888888765421 121112222 22221 12336799999999
Q ss_pred EEEEEeeeE-------CCeeeeeEEEeecC
Q 013513 251 VLMDVGCEL-------HGYVSDMTRTWPPC 273 (441)
Q Consensus 251 v~id~g~~~-------~GY~~d~~Rt~~v~ 273 (441)
+.|.+|..- +-|.--++-|+.|+
T Consensus 338 Fni~lGf~nl~n~~~~~~yaL~l~DTvlv~ 367 (960)
T KOG1189|consen 338 FNISLGFSNLTNPESKNSYALLLSDTVLVG 367 (960)
T ss_pred EEEeeccccccCcccccchhhhccceeeec
Confidence 999999632 34777788999883
No 78
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=47.07 E-value=1.3e+02 Score=26.70 Aligned_cols=41 Identities=17% Similarity=0.070 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Q 013513 277 SSLEEALYDLILQTNKECLELCMPGTSLLQIHHYSVGMLRK 317 (441)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~v~~a~~~~~~~ 317 (441)
.++++.....+.+-..+.+...-|..+..+-.+.+.+.+.+
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~ 154 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTK 154 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHc
Confidence 47788888888888889999999999999988877766654
No 79
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=26.73 E-value=54 Score=19.80 Aligned_cols=15 Identities=53% Similarity=0.791 Sum_probs=12.8
Q ss_pred CCCHHHHHHHHHHHH
Q 013513 9 GISAEEYISRRKRLL 23 (441)
Q Consensus 9 ~~~~~e~~~R~~rl~ 23 (441)
.||.+||.++.++|.
T Consensus 16 ~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 16 EISEEEYEQKKARLL 30 (31)
T ss_pred CCCHHHHHHHHHHHh
Confidence 578999999998875
No 80
>cd04896 ACT_ACR-like_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). This CD includes the third ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins, found only in Arabidopsis and Oryza, as yet, are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) have been described, however, the ACR-like sequences in this CD are distinct from those characterized. This CD includes the Oryza sativa ACR-like protein (Os05g0113000) encoded on chromosome 5 and the Arabidopsis thaliana predicted gene product, At2g39570. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=24.08 E-value=63 Score=24.15 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=22.7
Q ss_pred eeEEEeEeEEEcCCCccccCCCCCCCHHHHHHHH
Q 013513 388 IGIRIEDEVLITETGYEVLTGSLPKEIKHIESLL 421 (441)
Q Consensus 388 ~g~~~ed~vlVte~G~e~Lt~~~p~~~~~i~~~~ 421 (441)
.|-+.+|+++|+.+|.. |++ |.....+...|
T Consensus 38 ~Gerv~D~Fyv~~~g~k-l~d--~~~~~~L~~~L 68 (75)
T cd04896 38 KGYREVDLFIVQSDGKK-IMD--PKKQAALCARL 68 (75)
T ss_pred ccCEEEEEEEEeCCCCc-cCC--HHHHHHHHHHH
Confidence 68899999999777766 775 56666665443
No 81
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
Probab=23.95 E-value=1.1e+02 Score=29.23 Aligned_cols=97 Identities=11% Similarity=0.020 Sum_probs=56.8
Q ss_pred HHHHHHHHhccC-----CCCHHHHHHHHHHHHHHcCCCCCCCCceeeeCCCCCccCccCCCcccCCCCeEEEEEeeeECC
Q 013513 187 QALLQTMLHSKS-----HPYEGLLAAKFEYECKMRGAQRMAFNPVVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHG 261 (441)
Q Consensus 187 ~~~~~~~~~~~p-----G~tE~ei~~~~~~~~~~~G~~~~~~~~~v~~G~~~~~~h~~~~~~~l~~gd~v~id~g~~~~G 261 (441)
.++.+.+..++| |....+-...+++........- .++.. |+- ++- +|
T Consensus 131 Tvv~KLf~iv~P~~ayfGeKD~QQl~iIr~mv~Dl~~~v----~I~~~----------ptv---Re~-----------dG 182 (280)
T PF02569_consen 131 TVVAKLFNIVQPDRAYFGEKDYQQLAIIRRMVRDLNLPV----EIVGC----------PTV---REP-----------DG 182 (280)
T ss_dssp HHHHHHHHHH--SEEEEETTSHHHHHHHHHHHHHTT-SS----EEEEE----------------B-T-----------TS
T ss_pred HHHHHHHHHhCCCEEEEechHHHHHHHHHHHHHHhCCCC----EEEEe----------CCe---ECC-----------CC
Confidence 345556666777 6667766677777777765420 12111 110 110 12
Q ss_pred eeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCC-CChHHHHHHHHHHHH
Q 013513 262 YVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPG-TSLLQIHHYSVGMLR 316 (441)
Q Consensus 262 Y~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG-~~~~~v~~a~~~~~~ 316 (441)
. +=.+|...+ ++++|+.-.....+...+.++++.| ....++-+++.+.+.
T Consensus 183 L-AlSSRN~~L----s~~eR~~A~~l~~~L~~a~~~~~~G~~~~~~l~~~~~~~l~ 233 (280)
T PF02569_consen 183 L-ALSSRNVYL----SPEEREAAPVLYRALKAAKEAIRAGERDASELIQAARKILE 233 (280)
T ss_dssp --B--GGGGGS-----HHHHHHTTHHHHHHHHHHHHHHTT--BHHHHHHHHHHHHH
T ss_pred C-ceeeccccC----CHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHh
Confidence 1 224676665 8899998888899999999999999 457788777766654
No 82
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=23.64 E-value=2e+02 Score=21.76 Aligned_cols=52 Identities=23% Similarity=0.221 Sum_probs=36.5
Q ss_pred CcccCCCCeEEEEEeeeE-CCeeeeeE------EEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 013513 242 DQKIDDGDLVLMDVGCEL-HGYVSDMT------RTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTS 303 (441)
Q Consensus 242 ~~~l~~gd~v~id~g~~~-~GY~~d~~------Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~ 303 (441)
++.++.||.|.+++-+.. +|-.-|-+ .+|.+ |.-. +..+.+.++..+++|-+
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~-g~~~---------~i~g~e~al~~m~~Ge~ 60 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRL-GSGQ---------VIPGLEEALIGMKVGEK 60 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEET-TSSS---------SSHHHHHHHTTSBTTEE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeee-ccCc---------cccchhhhcccccCCCE
Confidence 456889999999999988 77666666 56666 5311 24466777777777744
No 83
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=23.17 E-value=1.7e+02 Score=18.04 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Q 013513 182 ASIGCQALLQTMLHSKSHPYEGLLAAKFEYEC 213 (441)
Q Consensus 182 a~i~~~~~~~~~~~~~pG~tE~ei~~~~~~~~ 213 (441)
+.++..++..+...++...|+.+|...+....
T Consensus 4 C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C 35 (39)
T PF05184_consen 4 CDICKFVVKEIEKLLKNNKTEEEIKKALEKAC 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 56777888888889999999999998887765
No 84
>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=23.12 E-value=33 Score=34.31 Aligned_cols=75 Identities=12% Similarity=0.184 Sum_probs=51.8
Q ss_pred eeeeCCCCCccCccCCCcccCCCCeEEEEEeeeECCeeeeeEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChH
Q 013513 226 VVGGGPNAAVIHYSRNDQKIDDGDLVLMDVGCELHGYVSDMTRTWPPCGSFSSLEEALYDLILQTNKECLELCMPGTSLL 305 (441)
Q Consensus 226 ~v~~G~~~~~~h~~~~~~~l~~gd~v~id~g~~~~GY~~d~~Rt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~ 305 (441)
++--|.|+.+.....-.+.|.+-.+..|-+|+.-+-.-+-.+-++..||. +++|+.+...+..+.+... |.+|.
T Consensus 97 IiIDGGNs~y~DT~RR~~eL~~~Gi~FvG~GVSGGEeGA~~GPSiMpGG~-----~eay~~v~pil~~IaAk~~-g~pCc 170 (473)
T COG0362 97 IIIDGGNSHYKDTIRRNKELSEKGILFVGMGVSGGEEGARHGPSIMPGGQ-----KEAYELVAPILTKIAAKVD-GEPCC 170 (473)
T ss_pred EEEeCCCcCCchHHHHHHHHHhcCCeEEeccccccccccccCCCcCCCCC-----HHHHHHHHHHHHHHHhhcC-CCCce
Confidence 56666777554433334556777788888887766666666666666554 5789998888888887777 77775
Q ss_pred H
Q 013513 306 Q 306 (441)
Q Consensus 306 ~ 306 (441)
+
T Consensus 171 ~ 171 (473)
T COG0362 171 T 171 (473)
T ss_pred e
Confidence 4
No 85
>PHA02447 hypothetical protein
Probab=22.30 E-value=39 Score=24.19 Aligned_cols=28 Identities=29% Similarity=0.412 Sum_probs=17.3
Q ss_pred ceEEEcCCCCCCeE-EEEEcCCceEEEcc
Q 013513 55 NYLYITGCQQPGGV-AVLSHECGLCMFMP 82 (441)
Q Consensus 55 n~~yltG~~~~~~~-lvv~~~~~~~l~~~ 82 (441)
..-|||||-.|+-+ .|+|.|..-..+-|
T Consensus 9 twewftgfvgpgrwravlpgdrrnawinp 37 (86)
T PHA02447 9 TWEWFTGFVGPGRWRAVLPGDRRNAWINP 37 (86)
T ss_pred ehhhhhcccCCCceeeecCCcccccccCh
Confidence 44699999988755 45554544444444
Done!