BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013514
(441 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359481991|ref|XP_002277150.2| PREDICTED: uncharacterized protein LOC100242486 [Vitis vinifera]
Length = 496
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 255/362 (70%), Gaps = 37/362 (10%)
Query: 104 RPWQPPQQHFSHFSSLPSSSSATPSTSASPPIPSPP--------RGGIAIGVPAPRPTAL 155
RPWQ Q HF HFSS SSSS++ ST + S RGGIAIGVPA +PT
Sbjct: 44 RPWQQ-QSHFQHFSSNLSSSSSSSSTPSLSTSTSSSAVSAPPSQRGGIAIGVPAGQPT-- 100
Query: 156 SPQPSPPFSS----SFGQPFGGLGRSGVNVPDSVR-------PPAIQG---MGVMGSLGS 201
PFSS +FGQ +GGLGRS VNVP+SV P+IQG MG+MG+LGS
Sbjct: 101 ------PFSSLNPPTFGQQYGGLGRSAVNVPESVANTNTSQVRPSIQGSQGMGMMGTLGS 154
Query: 202 SSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVSQVGSPGSSSP 261
SQMRP GIS HHQ RPVQ SSLRP S+ ++QSP TQNFQG GL+R S VGSPG+ SP
Sbjct: 155 GSQMRPGGISA-HHQQRPVQ-SSLRPQ-STVNNQSPATQNFQGHGLLRASSVGSPGAPSP 211
Query: 262 NTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHS-PL-STNLQQ 319
NTSQS+Q NQPWLSSGSQGKPPL PS +RPQM S+ QRSHIPQQH PL + + QQ
Sbjct: 212 NTSQSMQPHNQPWLSSGSQGKPPLPSPS-FRPQMTAQSLPQRSHIPQQHHHPLPTASQQQ 270
Query: 320 QHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKPSSLALVQPN 379
Q ++ QPQQ SHQ +HYGQQF RVPQS PH QQI R GS QKPSSLA+VQP+
Sbjct: 271 QMSTAQQPQQPLLSHQQQEHYGQQFPPSRVPQSLPHPQQIGRVQGSGNQKPSSLAIVQPS 330
Query: 380 AVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESV 439
Q G S+ A E+ E GNRIL+KRSI ELVNQIDPSE+LDP+VEDILVDIAEDFVES+
Sbjct: 331 TPQLGPHSRTASAEASESGNRILSKRSIHELVNQIDPSEKLDPEVEDILVDIAEDFVESI 390
Query: 440 SS 441
++
Sbjct: 391 TT 392
>gi|297740082|emb|CBI30264.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 171/253 (67%), Positives = 196/253 (77%), Gaps = 6/253 (2%)
Query: 191 QGMGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRV 250
QGMG+MG+LGS SQMRP GIS HHQ RPVQ SSLRP S+ ++QSP TQNFQG GL+R
Sbjct: 20 QGMGMMGTLGSGSQMRPGGISA-HHQQRPVQ-SSLRPQ-STVNNQSPATQNFQGHGLLRA 76
Query: 251 SQVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQH 310
S VGSPG+ SPNTSQS+Q NQPWLSSGSQGKPPL PS +RPQM S+ QRSHIPQQH
Sbjct: 77 SSVGSPGAPSPNTSQSMQPHNQPWLSSGSQGKPPLPSPS-FRPQMTAQSLPQRSHIPQQH 135
Query: 311 S-PL-STNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQ 368
PL + + QQQ ++ QPQQ SHQ +HYGQQF RVPQS PH QQI R GS Q
Sbjct: 136 HHPLPTASQQQQMSTAQQPQQPLLSHQQQEHYGQQFPPSRVPQSLPHPQQIGRVQGSGNQ 195
Query: 369 KPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDIL 428
KPSSLA+VQP+ Q G S+ A E+ E GNRIL+KRSI ELVNQIDPSE+LDP+VEDIL
Sbjct: 196 KPSSLAIVQPSTPQLGPHSRTASAEASESGNRILSKRSIHELVNQIDPSEKLDPEVEDIL 255
Query: 429 VDIAEDFVESVSS 441
VDIAEDFVES+++
Sbjct: 256 VDIAEDFVESITT 268
>gi|224087397|ref|XP_002308150.1| predicted protein [Populus trichocarpa]
gi|222854126|gb|EEE91673.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 228/347 (65%), Gaps = 29/347 (8%)
Query: 98 RPTSFSRPWQPPQQHFSHFSSLPSSSSATPSTSASPPIPSPPRGGIAIGVPAPRPTALSP 157
RP + RPWQ P H S F S+ S S+S +P G+A+GVPAP P + S
Sbjct: 76 RPQTVHRPWQHPHPH-SQFPSVSSGPPIPSSSSTTPS--ISSPRGVALGVPAPSPASFS- 131
Query: 158 QPSPPFSSSFGQPFGGLGRSGVNVPDSVRPPAIQGM--GVMGSLGSSSQMRPAGISVQHH 215
SSFG F GL R+ VNVP+SV + + GVM S+ S+SQMRP H
Sbjct: 132 -------SSFGHQFVGLNRAPVNVPESVANTSNSQVRQGVMASMASNSQMRP-------H 177
Query: 216 QPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVSQVGSPGSSSPNTSQSVQSFNQPWL 275
Q RPVQ SSLRPP SSP+ TQNF G +R + VG+ GS PNTSQS+QS NQ WL
Sbjct: 178 QQRPVQ-SSLRPPTSSPN-----TQNFPGHVFIRSTPVGTAGSPVPNTSQSLQSPNQLWL 231
Query: 276 SSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIP-QQHSPLSTNLQQQHLSSVQPQQSKPSH 334
SS SQGKPPL PS YRPQMN+PS+QQRSHIP Q HSP +T+ QQQH+S QPQQ SH
Sbjct: 232 SSASQGKPPLPSPS-YRPQMNSPSLQQRSHIPPQHHSPPTTS-QQQHMSPAQPQQPLQSH 289
Query: 335 QLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKPSSLALVQPNAVQTGNQSKIAGTES 394
Q P+HYGQQF RV QS QQ++R GS KPSSLA+ PN VQ Q+ IA ES
Sbjct: 290 QQPEHYGQQFPPSRVQQSLSPLQQVSRVQGSVNHKPSSLAMSHPNTVQPLPQNSIANAES 349
Query: 395 DEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
DE GNRIL+KRSI ELV+QIDPSE+ +P+V +IL DIA++F+ SV++
Sbjct: 350 DESGNRILSKRSIHELVSQIDPSEKFNPEVVEILADIADEFLVSVTT 396
>gi|356548409|ref|XP_003542594.1| PREDICTED: uncharacterized protein LOC100787779 [Glycine max]
Length = 507
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 202/309 (65%), Gaps = 29/309 (9%)
Query: 140 RGGIAIGVPAPRPTALSPQPSPPFSSSFGQPFGGLGRSGVNVPDS--------VRPPAIQ 191
RGG+AIGVPA + P S GQ FGGLGR+ VNV +S R P +Q
Sbjct: 118 RGGMAIGVPAHHQSPSPPFSSSF-----GQHFGGLGRTAVNVAESTSNSSTSQARTP-VQ 171
Query: 192 GMGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVS 251
GMG++GS QMRP+GI HQ R VQ SSLRPP S+P++Q G+Q+FQG GLMR S
Sbjct: 172 GMGMLGS-----QMRPSGIGS--HQQRSVQ-SSLRPPTSAPNNQPAGSQSFQGHGLMRPS 223
Query: 252 QVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHS 311
VGS + SP++SQS+QS NQPWLSSGSQGKPPL P + YR Q+N SMQQRSHIP
Sbjct: 224 SVGSTATPSPSSSQSMQSLNQPWLSSGSQGKPPL-PSAAYRQQLNPQSMQQRSHIPPMQQ 282
Query: 312 PLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKPS 371
T+ QQQ + QS+ +H+GQQ R P PHQ Q+TR G QKPS
Sbjct: 283 STPTSSQQQQQQPLLSNQSQ------EHFGQQVPPSRAPLHMPHQPQVTRLQGPGNQKPS 336
Query: 372 SLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDI 431
SL Q +A Q G QS++ +++DE N IL+KRSI ELVNQ+DP E+L+P+V DILVDI
Sbjct: 337 SLVAAQSSAAQPGTQSRLTNSDTDESSNSILSKRSIHELVNQVDPLEKLEPEVADILVDI 396
Query: 432 AEDFVESVS 440
AE+F+ES++
Sbjct: 397 AENFLESIT 405
>gi|356537087|ref|XP_003537062.1| PREDICTED: uncharacterized protein LOC100781682 [Glycine max]
Length = 507
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 167/311 (53%), Positives = 205/311 (65%), Gaps = 46/311 (14%)
Query: 143 IAIGVPAPRPTALSPQPSPPFSSSFGQPFGGLGRSGVNVPDS--------VRPPAIQGMG 194
+AIGVPA + SPPFSSSFGQ FGGLGR+GVNV +S VR P +QG G
Sbjct: 128 MAIGVPAHHQSP-----SPPFSSSFGQHFGGLGRTGVNVAESTSNSSTSQVRTP-VQGTG 181
Query: 195 VMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPP-SSPSSQSPGTQNFQGQGLMRVSQV 253
++GS QMRP+GI HQ RPVQ SSLRPPP S+P++Q G+Q+FQG GLMR S V
Sbjct: 182 MLGS-----QMRPSGIGA--HQQRPVQ-SSLRPPPPSAPNNQPAGSQSFQGHGLMRSSSV 233
Query: 254 GSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHSPL 313
GSP + SP++S S+QS NQPWLSSG QGKPPL P + YR Q+N SMQQR HIP Q
Sbjct: 234 GSPATPSPSSSLSMQSLNQPWLSSGPQGKPPL-PSAAYRQQLNPQSMQQRPHIPLQ---- 288
Query: 314 STNLQQQHLSSVQPQQSKP----SHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQK 369
QQS P ++Q +H+GQQ PR P PHQ QI R G QK
Sbjct: 289 --------------QQSTPTPLLANQSQEHFGQQVLPPRAPLHVPHQPQIMRVHGPGNQK 334
Query: 370 PSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILV 429
PSSL Q +A Q G +S++ T++DE N IL+KRSI ELVNQ+DP E+L+P+V DILV
Sbjct: 335 PSSLVAAQSSAAQPGTRSRLTNTDTDESSNSILSKRSIHELVNQVDPLEKLEPEVADILV 394
Query: 430 DIAEDFVESVS 440
DIAE+F+ES++
Sbjct: 395 DIAENFLESIT 405
>gi|449482360|ref|XP_004156257.1| PREDICTED: uncharacterized protein LOC101226357 [Cucumis sativus]
Length = 511
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 170/311 (54%), Positives = 202/311 (64%), Gaps = 25/311 (8%)
Query: 140 RGGIAIGVPAPRPTALSPQPSPPFSSSFGQPFGGLGRSGVNVPDS--------VRPPAIQ 191
R G+AIGVPA +PT SPQP+P FS+S+GQ FGGLGR GV++ D VRPP +Q
Sbjct: 126 RSGVAIGVPAHQPTP-SPQPAP-FSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP-MQ 182
Query: 192 GMGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVS 251
GM + + H RPVQ SSLRPP S+P+S S QNFQG GL+RV
Sbjct: 183 GM----QGLGMLGSSGSSSQMLH---RPVQ-SSLRPP-STPNSAS---QNFQGHGLLRVP 230
Query: 252 QVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHS 311
SP SS PNTSQ +Q NQPWL S SQGKPPL PS YRPQ N+P+MQQRSHIPQQ +
Sbjct: 231 STSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPS-YRPQANSPAMQQRSHIPQQQN 289
Query: 312 -PLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKP 370
PL+ QQQ +SS QQ SHQ +H+ QQF R Q PHQQQ R G A K
Sbjct: 290 HPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKA 349
Query: 371 SSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVD 430
S LA Q N Q S+ E +E +RIL+KRSI +LVNQIDPSERLDP+VEDILVD
Sbjct: 350 SPLAPPQTNNAQALTPSRAITAEVEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVD 409
Query: 431 IAEDFVESVSS 441
+AE+FVES+++
Sbjct: 410 LAEEFVESITT 420
>gi|297833786|ref|XP_002884775.1| tata-associated factor II 58 [Arabidopsis lyrata subsp. lyrata]
gi|297330615|gb|EFH61034.1| tata-associated factor II 58 [Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 186/371 (50%), Positives = 227/371 (61%), Gaps = 39/371 (10%)
Query: 92 LTPPPPRPTSFSRPWQPPQQH--FSHFSSLPSSSSATPSTSASPP----IPSPPRGGIAI 145
L PPP+ ++SRPWQ QH ++HFSS S ++ S AS I RGG+AI
Sbjct: 89 LVRPPPQ--AYSRPWQ---QHSSYTHFSSASSPLLSSSSAPASSSSSLPITGQQRGGMAI 143
Query: 146 GVPAPRPTALSP---QPSP-PFSSSFGQPFGGLGRSGVNVPDS--------VRPP-AIQG 192
GVPA + SP Q +P F SFGQ +GGLGR V + ++ VR QG
Sbjct: 144 GVPASPIPSPSPTPSQHTPSAFPGSFGQQYGGLGRGTVGMSEATSNSSAPQVRMMQGTQG 203
Query: 193 MGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVSQ 252
+G+MG+LGS SQMRP+G++ HQ RP Q SSLRP SSPS+QSP QNFQG LMR S
Sbjct: 204 IGMMGTLGSGSQMRPSGMA--QHQQRPTQ-SSLRPA-SSPSTQSPVAQNFQGHSLMRPSP 259
Query: 253 VGSPGSSSPNTSQ-SVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHS 311
+GSP S SQ S+Q+ NQPWLSS QGKPPL PPS YRPQ+N+PSMQQR HIPQQH
Sbjct: 260 IGSPSVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPS-YRPQVNSPSMQQRPHIPQQH- 317
Query: 312 PLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKPS 371
LST+ +S Q P QQ SP+ P PHQ TR G QK +
Sbjct: 318 -LSTSA----ATSQPQQLQSQQQHQPQEQLQQLRSPQQPLPHPHQP--TRVQGLVNQKVT 370
Query: 372 SLAL-VQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVD 430
S + QP Q GN +K E++ +RIL KRSI EL+ QIDPSE+LDP+VEDIL D
Sbjct: 371 SPVMPSQPPVAQPGNHAKTVSAENETSDDRILGKRSIHELLQQIDPSEKLDPEVEDILAD 430
Query: 431 IAEDFVESVSS 441
IAEDFVES+++
Sbjct: 431 IAEDFVESITT 441
>gi|449451128|ref|XP_004143314.1| PREDICTED: uncharacterized protein LOC101211513 [Cucumis sativus]
Length = 511
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 165/311 (53%), Positives = 198/311 (63%), Gaps = 25/311 (8%)
Query: 140 RGGIAIGVPAPRPTALSPQPSPPFSSSFGQPFGGLGRSGVNVPDS--------VRPPAIQ 191
R G+AIGVPA +PT SPQP+P FS+S+GQ FGGLGR GV++ D VRPP +Q
Sbjct: 126 RSGVAIGVPAHQPTP-SPQPAP-FSASYGQHFGGLGRGGVSISDGASNSNPSQVRPP-MQ 182
Query: 192 GMGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVS 251
GM + + H RPVQ SSLRPP S+P+S S QNFQG GL+RV
Sbjct: 183 GM----QGLGMLGSSGSSSQMLH---RPVQ-SSLRPP-STPNSAS---QNFQGHGLLRVP 230
Query: 252 QVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHS 311
SP SS PNTSQ +Q NQPWL S SQGKPPL PS YRPQ N+P+MQQRSHIPQQ +
Sbjct: 231 STSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPS-YRPQANSPAMQQRSHIPQQQN 289
Query: 312 -PLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKP 370
PL+ QQQ +SS QQ SHQ +H+ QQF R Q PHQQQ R G A K
Sbjct: 290 HPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSRSSQGLPHQQQAARAQGPANPKA 349
Query: 371 SSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVD 430
S LA Q N Q S+ E +E +RIL+KRSI +LVNQIDPSERLDP+VEDILVD
Sbjct: 350 SPLAPPQTNNAQALTPSRAITAEMEEPCSRILSKRSIGKLVNQIDPSERLDPEVEDILVD 409
Query: 431 IAEDFVESVSS 441
+A+ + +++
Sbjct: 410 LADTYFVQITT 420
>gi|255575631|ref|XP_002528715.1| protein with unknown function [Ricinus communis]
gi|223531809|gb|EEF33627.1| protein with unknown function [Ricinus communis]
Length = 451
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 151/210 (71%), Gaps = 14/210 (6%)
Query: 241 NFQGQGLMRVSQVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTP-S 299
NFQGQG +R S VGS GS +PNTSQ++QS NQPWLSSGSQGKPPL PS YRPQ+N+P S
Sbjct: 147 NFQGQGYIRPSLVGS-GSPAPNTSQNLQSPNQPWLSSGSQGKPPLPSPS-YRPQINSPSS 204
Query: 300 MQQRSHIPQQHSPLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQI 359
+QQRSHIPQQH L TN QQQH+S QP QS SH +H GQQF R P+S Q +
Sbjct: 205 LQQRSHIPQQHQSLPTNSQQQHMSPSQPHQSLTSHPPSEHLGQQFPPTRGPRSITQQLAL 264
Query: 360 TRPPGSATQKPSSLALVQP--------NAVQTGNQSKIAGTESDEFGNRILTKRSIQELV 411
P QKPSSLA+V P N VQ G ++ A ESDE GNRIL+KR+I ELV
Sbjct: 265 QSLPN---QKPSSLAVVHPSPVANTVSNTVQPGTLNRTAIPESDESGNRILSKRNIHELV 321
Query: 412 NQIDPSERLDPDVEDILVDIAEDFVESVSS 441
QIDPSE+LDP+VEDIL DIA++FVES+++
Sbjct: 322 TQIDPSEKLDPEVEDILADIADEFVESITT 351
>gi|18398741|ref|NP_566367.1| transcription initiation factor TFIID subunit D10 [Arabidopsis
thaliana]
gi|6143870|gb|AAF04417.1|AC010927_10 unknown protein [Arabidopsis thaliana]
gi|13492646|gb|AAK28289.1|AF344878_1 putative TBP-associated 58 kDa subunit protein [Arabidopsis
thaliana]
gi|39545904|gb|AAR28015.1| TAF12 [Arabidopsis thaliana]
gi|62320727|dbj|BAD95394.1| hypothetical protein [Arabidopsis thaliana]
gi|332641335|gb|AEE74856.1| transcription initiation factor TFIID subunit D10 [Arabidopsis
thaliana]
Length = 539
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 182/371 (49%), Positives = 225/371 (60%), Gaps = 39/371 (10%)
Query: 92 LTPPPPRPTSFSRPWQPPQQH--FSHFSSLPSSSSATPSTSASPP----IPSPPRGGIAI 145
L PPP+ ++SRPWQ QH ++HFSS S ++ S AS I RGG+AI
Sbjct: 87 LVRPPPQ--AYSRPWQ---QHSSYTHFSSASSPLLSSSSAPASSSSSLPISGQQRGGMAI 141
Query: 146 GVPAPRPTALSPQPSP----PFSSSFGQPFGGLGRSGVNVPDS--------VRPP-AIQG 192
GVPA + SP PS F SFGQ +GGLGR V + ++ VR QG
Sbjct: 142 GVPASPIPSPSPTPSQHSPSAFPGSFGQQYGGLGRGTVGMSEATSNTSSPQVRMMQGTQG 201
Query: 193 MGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQGQGLMRVSQ 252
+G+MG+LGS SQ+RP+G++ HQ RP Q SSLRP SS S+QSP QNFQG LMR S
Sbjct: 202 IGMMGTLGSGSQIRPSGMT--QHQQRPTQ-SSLRPA-SSTSTQSPVAQNFQGHSLMRPSP 257
Query: 253 VGSPGSSSPNTSQ-SVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQRSHIPQQHS 311
+ SP S SQ S+Q+ NQPWLSS QGKPPL PPS YRPQ+N+PSMQQR HIPQQH
Sbjct: 258 ISSPNVQSTGASQQSLQAINQPWLSSTPQGKPPLPPPS-YRPQVNSPSMQQRPHIPQQH- 315
Query: 312 PLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRVPQSSPHQQQITRPPGSATQKPS 371
+ST+ + QQ P QQ SP+ P + PHQ TR G QK +
Sbjct: 316 -ISTSA----ATPQPQQQQSQQQHQPQEQLQQLRSPQQPLAHPHQP--TRVQGLVNQKVT 368
Query: 372 SLAL-VQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVD 430
S + QP Q GN +K E++ +RIL KRSI EL+ QIDPSE+LDP+VEDIL D
Sbjct: 369 SPVMPSQPPVAQPGNHAKTVSAETEPSDDRILGKRSIHELLQQIDPSEKLDPEVEDILSD 428
Query: 431 IAEDFVESVSS 441
IAEDFVES+++
Sbjct: 429 IAEDFVESITT 439
>gi|414879606|tpg|DAA56737.1| TPA: hypothetical protein ZEAMMB73_736720 [Zea mays]
Length = 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 160/321 (49%), Gaps = 62/321 (19%)
Query: 139 PRGGIAIGVPAPRPTALSPQ------PSPPFSSSFGQPFGGLGRSGVNVPDSVRP----- 187
PRGG+ +GVPAPR +A +P P PP + FG G PD P
Sbjct: 121 PRGGVVLGVPAPR-SAQTPAGYTGFVPPPPLAHQFGSMHRG--------PDQPPPSSSQF 171
Query: 188 ----PAIQGMGVMGSLGSSSQMRPAGISVQHHQPRPVQQSSLRPPPSSPSSQSPGTQNFQ 243
P Q +G++GSL ++SQ+ P IS +PRP SS P PS SQ PG+Q
Sbjct: 172 RQPSPGTQNIGIVGSL-NTSQISPGTIS-GPQKPRPGLPSS-TPIPSG--SQMPGSQRPP 226
Query: 244 GQGLMRVSQVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSMQQR 303
Q LMR V SP +S T QS S +P RPQ++ P QQ
Sbjct: 227 SQSLMRPVTVSSPSLASQQTPQSSSSTFRPQ----------------QRPQVSQPRPQQS 270
Query: 304 SHI--PQQHSPLSTNLQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRV-PQSSPHQQQIT 360
+ PQQ++ L+ Q QQ SHQ QQ ++P+ PQ S H
Sbjct: 271 QLVTPPQQNTILTQQ------QQQQKQQQSASHQ-----NQQIAAPKNQPQLSQHP--TA 317
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERL 420
R P S T KP L +Q AV + + E G R+LTKRSI ELV QIDP+E+L
Sbjct: 318 RTPISMTPKPD-LPAIQNVAVLQSVDTAATDANASETGTRLLTKRSIHELVAQIDPNEKL 376
Query: 421 DPDVEDILVDIAEDFVESVSS 441
DP+VED+L+DIAEDFVESV++
Sbjct: 377 DPEVEDVLIDIAEDFVESVTT 397
>gi|218189414|gb|EEC71841.1| hypothetical protein OsI_04504 [Oryza sativa Indica Group]
Length = 494
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERL 420
R P S QK S A+++ VQ+G+ + + ++ GNR+L+KRSI ELV QIDPSE+L
Sbjct: 323 RTPVSMAQKLDSPAVLKATNVQSGDMASV-DVDAGGSGNRLLSKRSIHELVAQIDPSEKL 381
Query: 421 DPDVEDILVDIAEDFVESVSS 441
DP+VED+L+DIAEDFVESV++
Sbjct: 382 DPEVEDVLIDIAEDFVESVAT 402
>gi|115441161|ref|NP_001044860.1| Os01g0858500 [Oryza sativa Japonica Group]
gi|113534391|dbj|BAF06774.1| Os01g0858500 [Oryza sativa Japonica Group]
gi|222619571|gb|EEE55703.1| hypothetical protein OsJ_04136 [Oryza sativa Japonica Group]
Length = 301
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERL 420
R P S QK S A+++ VQ+G+ + + ++ GNR+L+KRSI ELV QIDPSE+L
Sbjct: 130 RTPVSMAQKLDSPAVLKATNVQSGDMASV-DVDAGGSGNRLLSKRSIHELVAQIDPSEKL 188
Query: 421 DPDVEDILVDIAEDFVESVSS 441
DP+VED+L+DIAEDFVESV++
Sbjct: 189 DPEVEDVLIDIAEDFVESVAT 209
>gi|56784833|dbj|BAD82054.1| transcription initiation factor IID (TFIID) subunit A-like protein
[Oryza sativa Japonica Group]
Length = 295
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERL 420
R P S QK S A+++ VQ+G+ + + ++ GNR+L+KRSI ELV QIDPSE+L
Sbjct: 124 RTPVSMAQKLDSPAVLKATNVQSGDMASV-DVDAGGSGNRLLSKRSIHELVAQIDPSEKL 182
Query: 421 DPDVEDILVDIAEDFVESVSS 441
DP+VED+L+DIAEDFVESV++
Sbjct: 183 DPEVEDVLIDIAEDFVESVAT 203
>gi|414879607|tpg|DAA56738.1| TPA: hypothetical protein ZEAMMB73_736720 [Zea mays]
Length = 434
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 339 HYGQQFSSPRV-PQSSPHQQQITRPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEF 397
H QQ ++P+ PQ S Q R P S T KP L +Q AV + + E
Sbjct: 244 HQNQQIAAPKNQPQLS--QHPTARTPISMTPKPD-LPAIQNVAVLQSVDTAATDANASET 300
Query: 398 GNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
G R+LTKRSI ELV QIDP+E+LDP+VED+L+DIAEDFVESV++
Sbjct: 301 GTRLLTKRSIHELVAQIDPNEKLDPEVEDVLIDIAEDFVESVTT 344
>gi|357125960|ref|XP_003564657.1| PREDICTED: uncharacterized protein LOC100838369 [Brachypodium
distachyon]
Length = 274
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 356 QQQITRPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQID 415
QQQ+ R P S Q S A Q Q + + I + E NR+L+KRSI EL+ QID
Sbjct: 98 QQQVVRTPVSLIQTADSPAAQQATNTQLVDMASIDAA-AGESSNRLLSKRSIHELLAQID 156
Query: 416 PSERLDPDVEDILVDIAEDFVESV 439
PSERLDP+VED+L+DIAEDF+E+V
Sbjct: 157 PSERLDPEVEDVLIDIAEDFIENV 180
>gi|242059307|ref|XP_002458799.1| hypothetical protein SORBIDRAFT_03g040460 [Sorghum bicolor]
gi|241930774|gb|EES03919.1| hypothetical protein SORBIDRAFT_03g040460 [Sorghum bicolor]
Length = 498
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 356 QQQITRPPGSATQKPSSLALVQPN-AVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQI 414
QQ R P S T KP S A+ PN AV + E G R++TKRSI ELV QI
Sbjct: 324 QQPAARTPISMTPKPDSPAV--PNVAVLQSVDAAATDANGSETGARLITKRSIHELVAQI 381
Query: 415 DPSERLDPDVEDILVDIAEDFVESVSS 441
DP+E+LDP+VED+L+DIAEDFVESV++
Sbjct: 382 DPNEKLDPEVEDVLIDIAEDFVESVTT 408
>gi|357155119|ref|XP_003577014.1| PREDICTED: uncharacterized protein LOC100821745 [Brachypodium
distachyon]
Length = 284
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 356 QQQITRPPGSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQID 415
QQQ + P S TQK S A Q Q + + I + E NR+L+KRSI+EL+ QID
Sbjct: 108 QQQAAQTPVSLTQKADSPATQQATNTQLVDMASIDAA-AGESSNRLLSKRSIRELLAQID 166
Query: 416 PSERLDPDVEDILVDIAEDFVESV 439
PSE LDP+VED+L+DIAEDF+ESV
Sbjct: 167 PSESLDPEVEDVLIDIAEDFIESV 190
>gi|384484050|gb|EIE76230.1| hypothetical protein RO3G_00934 [Rhizopus delemar RA 99-880]
Length = 392
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 42/43 (97%)
Query: 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
NR+LTKR IQELV+QIDP+ERL+P+VEDIL++IA++F+ESV++
Sbjct: 277 NRVLTKRKIQELVSQIDPAERLEPEVEDILLEIADEFIESVTT 319
>gi|326508408|dbj|BAJ99471.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R S +QK ++L QP + G + +G++ E N++L KR IQ+LV Q+DP +
Sbjct: 367 RMSASGSQKSANLTGSQPGTPLSCGTMAGGSGSQGAEGTNQLLGKRKIQDLVAQVDPLGK 426
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
LDP+VED++++IA+DF+ESV++
Sbjct: 427 LDPEVEDLVLEIADDFIESVTA 448
>gi|18394483|ref|NP_564023.1| Transcription initiation factor TFIID subunit A [Arabidopsis
thaliana]
gi|30685323|ref|NP_849680.1| Transcription initiation factor TFIID subunit A [Arabidopsis
thaliana]
gi|15810159|gb|AAL07223.1| unknown protein [Arabidopsis thaliana]
gi|20259253|gb|AAM14362.1| unknown protein [Arabidopsis thaliana]
gi|39545906|gb|AAR28016.1| TAF12b [Arabidopsis thaliana]
gi|332191466|gb|AEE29587.1| Transcription initiation factor TFIID subunit A [Arabidopsis
thaliana]
gi|332191467|gb|AEE29588.1| Transcription initiation factor TFIID subunit A [Arabidopsis
thaliana]
Length = 683
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R A QK SL QP A Q+G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 486 RMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDV 542
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
+LDPDVED+L+++A+DF++SV+S
Sbjct: 543 HAKLDPDVEDLLLEVADDFIDSVTS 567
>gi|169218920|gb|ACA50283.1| cytokinin hypersensitive 1 [Arabidopsis thaliana]
Length = 681
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQ----SKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R A QK SL QP A Q+G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 484 RMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDV 540
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
+LDPDVED+L+++A+DF++SV+S
Sbjct: 541 HAKLDPDVEDLLLEVADDFIDSVTS 565
>gi|164661473|ref|XP_001731859.1| hypothetical protein MGL_1127 [Malassezia globosa CBS 7966]
gi|159105760|gb|EDP44645.1| hypothetical protein MGL_1127 [Malassezia globosa CBS 7966]
Length = 664
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 41/43 (95%)
Query: 399 NRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
NR+LTKR +QELV++IDPSE+L+ DVED+L++IA++F+ESV+S
Sbjct: 552 NRLLTKRKVQELVSEIDPSEQLEGDVEDLLLEIADEFIESVTS 594
>gi|9665128|gb|AAF97312.1|AC007843_15 Unknown protein [Arabidopsis thaliana]
Length = 674
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R A QK SL QP A Q+G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 486 RMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDV 542
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
+LDPDVED+L+++A+DF++SV+S
Sbjct: 543 HAKLDPDVEDLLLEVADDFIDSVTS 567
>gi|8778478|gb|AAF79486.1|AC022492_30 F1L3.13 [Arabidopsis thaliana]
Length = 734
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQ----SKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R A QK SL QP A Q+G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 483 RMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDV 539
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
+LDPDVED+L+++A+DF++SV+S
Sbjct: 540 HAKLDPDVEDLLLEVADDFIDSVTS 564
>gi|297850140|ref|XP_002892951.1| hypothetical protein ARALYDRAFT_471949 [Arabidopsis lyrata subsp.
lyrata]
gi|297338793|gb|EFH69210.1| hypothetical protein ARALYDRAFT_471949 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQ----SKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R A QK SL QP+A Q+G S GT++ N++L KR IQ+LV+Q+D
Sbjct: 473 RMSSHAGQKSVSLTGSQPDATQSGTTTPGGSSSQGTDAT---NQLLGKRKIQDLVSQVDV 529
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
+LDPDVED+L+++A+DF++SV+S
Sbjct: 530 HAKLDPDVEDLLLEVADDFIDSVTS 554
>gi|359482656|ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
gi|297743015|emb|CBI35882.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTGNQS-KIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R G A QK SL QP+A +G + + ++ E N++L KR IQ+LV+Q+D +
Sbjct: 387 RMAGPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEASNQLLGKRKIQDLVSQVDSQGK 446
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
LDP+VED+L++IA+DF++SV++
Sbjct: 447 LDPEVEDLLLEIADDFIDSVTT 468
>gi|449448116|ref|XP_004141812.1| PREDICTED: uncharacterized protein LOC101211341 [Cucumis sativus]
Length = 656
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 355 HQQQITRPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQEL 410
HQQ R G A QK SL P+A +G S GTE+ ++L KR IQ+L
Sbjct: 463 HQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEA---ATQVLGKRKIQDL 519
Query: 411 VNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
V+Q+DP +L+P+VED+L++IA+DF++SV++
Sbjct: 520 VSQVDPHGKLEPEVEDLLLEIADDFIDSVTT 550
>gi|449521733|ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227692 [Cucumis sativus]
Length = 668
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 355 HQQQITRPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQEL 410
HQQ R G A QK SL P+A +G S GTE+ ++L KR IQ+L
Sbjct: 463 HQQHSPRIAGLAGQKSLSLTGSHPDATASGASTPGGSSSQGTEA---ATQVLGKRKIQDL 519
Query: 411 VNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
V+Q+DP +L+P+VED+L++IA+DF++SV++
Sbjct: 520 VSQVDPHGKLEPEVEDLLLEIADDFIDSVTT 550
>gi|302398673|gb|ADL36631.1| C2H2L domain class transcription factor [Malus x domestica]
Length = 630
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R G A QK SL P+A +G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 433 RMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDS 489
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
RLDP+VED+L++IA+DF++SV++
Sbjct: 490 QGRLDPEVEDLLLEIADDFIDSVTT 514
>gi|357125850|ref|XP_003564602.1| PREDICTED: uncharacterized protein LOC100821588 [Brachypodium
distachyon]
Length = 543
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 367 TQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPDVE 425
+QK ++L QP + +G + + ++ E N++L KR IQ+LV Q+DP +LDP+VE
Sbjct: 367 SQKSANLTGSQPGTPLSSGTMAGGSASQGAEGTNQLLGKRKIQDLVAQVDPLCKLDPEVE 426
Query: 426 DILVDIAEDFVESVSS 441
D+ ++IA+DF+ESV++
Sbjct: 427 DLFLEIADDFIESVTA 442
>gi|115441027|ref|NP_001044793.1| Os01g0846900 [Oryza sativa Japonica Group]
gi|56784033|dbj|BAD82661.1| transcription initiation factor IID (TFIID) subunit A-like protein
[Oryza sativa Japonica Group]
gi|56784706|dbj|BAD81832.1| transcription initiation factor IID (TFIID) subunit A-like protein
[Oryza sativa Japonica Group]
gi|113534324|dbj|BAF06707.1| Os01g0846900 [Oryza sativa Japonica Group]
Length = 542
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R S +QK +L QP + G + + ++ E N++L KR IQ+LV+Q+DP +
Sbjct: 359 RISASGSQKSMNLTGSQPGTPLSGGTMTGGSASQGAEVTNQLLGKRKIQDLVSQVDPLGK 418
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
+DP+VED+L++IA+DF++SV++
Sbjct: 419 VDPEVEDLLLEIADDFIDSVTA 440
>gi|125572625|gb|EAZ14140.1| hypothetical protein OsJ_04067 [Oryza sativa Japonica Group]
Length = 543
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R S +QK +L QP + G + + ++ E N++L KR IQ+LV+Q+DP +
Sbjct: 360 RISASGSQKSMNLTGSQPGTPLSGGTMTGGSASQGAEVTNQLLGKRKIQDLVSQVDPLGK 419
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
+DP+VED+L++IA+DF++SV++
Sbjct: 420 VDPEVEDLLLEIADDFIDSVTA 441
>gi|125528368|gb|EAY76482.1| hypothetical protein OsI_04423 [Oryza sativa Indica Group]
Length = 545
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R S +QK +L QP + G + + ++ E N++L KR IQ+LV+Q+DP +
Sbjct: 362 RISASGSQKSMNLTGSQPGTPLSGGTMTGGSASQGAEVTNQLLGKRKIQDLVSQVDPLGK 421
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
+DP+VED+L++IA+DF++SV++
Sbjct: 422 VDPEVEDLLLEIADDFIDSVTA 443
>gi|331212077|ref|XP_003307308.1| hypothetical protein PGTG_00258 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309297711|gb|EFP74302.1| hypothetical protein PGTG_00258 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 753
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 364 GSATQKPSSLALVQPNAVQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPD 423
GS +P + + + +G G E+ NRI++KR IQELV IDPSERL+ +
Sbjct: 605 GSLMHRPPTNGINEALGQASGTHEATRGQEATS-ANRIISKRKIQELVESIDPSERLETE 663
Query: 424 VEDILVDIAEDFVESVS 440
VED+L+++A++F++SV+
Sbjct: 664 VEDLLLELADEFIDSVT 680
>gi|356519645|ref|XP_003528481.1| PREDICTED: uncharacterized protein LOC100783017 [Glycine max]
Length = 599
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R PG A QK SL QP+ +G S GTE+ N++L KR IQ+LV Q+DP
Sbjct: 400 RMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEAT---NQVLGKRKIQDLVAQVDP 456
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
RLDP+V D+L+++A+DF++S ++
Sbjct: 457 QGRLDPEVIDLLLELADDFIDSATT 481
>gi|296424382|ref|XP_002841727.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637975|emb|CAZ85918.1| unnamed protein product [Tuber melanosporum]
Length = 725
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 40/49 (81%)
Query: 393 ESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
E DE G +L+KR ++ELV QIDP ERLDPDVE+ ++++ ++F++S+++
Sbjct: 604 EFDEGGMGLLSKRKLEELVKQIDPEERLDPDVEEAILELVDEFIDSIAT 652
>gi|357513949|ref|XP_003627263.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
gi|355521285|gb|AET01739.1| Transcription initiation factor TFIID subunit [Medicago truncatula]
Length = 571
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Query: 352 SSPHQQQIT---RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTK 404
+S HQQQ R G QK SL QP+A +G S GTE+ N++L K
Sbjct: 360 ASVHQQQHLHSPRVAGPTGQKSISLTGSQPDATASGATTPGGSSSQGTEAAT--NQVLGK 417
Query: 405 RSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
R IQ+LV Q+DP +LDP+V D+L++ A+DF++SV++
Sbjct: 418 RKIQDLVAQVDPQGKLDPEVIDLLLEFADDFIDSVTT 454
>gi|242059221|ref|XP_002458756.1| hypothetical protein SORBIDRAFT_03g039720 [Sorghum bicolor]
gi|241930731|gb|EES03876.1| hypothetical protein SORBIDRAFT_03g039720 [Sorghum bicolor]
Length = 554
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R S +QK ++L QP + G + + ++ E +++L KR IQ+LV Q+DP +
Sbjct: 371 RVSASGSQKSANLTGSQPGTPLSVGTMTGGSASQGAEGTSQLLGKRKIQDLVAQVDPLGK 430
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
+DP+VED+L++IA+DF++SV++
Sbjct: 431 VDPEVEDLLLEIADDFIDSVTA 452
>gi|224058669|ref|XP_002299594.1| predicted protein [Populus trichocarpa]
gi|222846852|gb|EEE84399.1| predicted protein [Populus trichocarpa]
Length = 656
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R PG QK SL QP+A +G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 405 RMPGPTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDS 461
Query: 417 SERLDPDVEDILVDIAEDFVESV 439
+LDPDVE++ ++IA+DF++S+
Sbjct: 462 HGKLDPDVEELFLEIADDFIDSM 484
>gi|293332721|ref|NP_001169752.1| uncharacterized protein LOC100383633 [Zea mays]
gi|224031427|gb|ACN34789.1| unknown [Zea mays]
gi|414879723|tpg|DAA56854.1| TPA: transcription associated factor1 isoform 1 [Zea mays]
gi|414879724|tpg|DAA56855.1| TPA: transcription associated factor1 isoform 2 [Zea mays]
Length = 547
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTGNQSKIAGTESDEFGNRILTKRSIQELVNQIDPSER 419
R S +QK ++L QP + G + + ++ E +++L KR IQ+LV Q+DP +
Sbjct: 364 RVSASGSQKSANLTGSQPGTPLSGGTMTGGSASQGAEGTSQLLGKRKIQDLVAQVDPLGK 423
Query: 420 LDPDVEDILVDIAEDFVESVSS 441
+DP+VED+L++IA+DF++SV++
Sbjct: 424 VDPEVEDLLLEIADDFIDSVTA 445
>gi|77403675|dbj|BAE46416.1| TATA binding protein associated factor [Solanum tuberosum]
Length = 638
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 42/51 (82%), Gaps = 3/51 (5%)
Query: 391 GTESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
GTE+ N++L KR IQ+LV+Q+D +LDP+VED+L++IA+DF++SV++
Sbjct: 477 GTEAS---NQLLGKRKIQDLVSQVDAQGKLDPEVEDLLLEIADDFIDSVTT 524
>gi|224073716|ref|XP_002304140.1| predicted protein [Populus trichocarpa]
gi|222841572|gb|EEE79119.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 361 RPPGSATQKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDP 416
R PG QK SL QP+A +G S GTE+ N++L KR IQ+LV+Q+D
Sbjct: 427 RMPGPPGQKTLSLTGSQPDATASGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDS 483
Query: 417 SERLDPDVEDILVDIAEDFVESVSS 441
+LDP+VE++ ++IA+DF++SV++
Sbjct: 484 HGKLDPEVEELFLEIADDFIDSVTA 508
>gi|357139499|ref|XP_003571319.1| PREDICTED: uncharacterized protein LOC100821508 [Brachypodium
distachyon]
Length = 435
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 9/90 (10%)
Query: 361 RPPGSATQKPSSLALVQPNA-VQTG----NQSKIAGTESDE----FGNRILTKRSIQELV 411
R P SA+Q P+ LA +QP A +Q G + +AG + +++L KR IQ+LV
Sbjct: 307 RMPPSASQNPAGLAGLQPVAGLQPGVAPLSGGAVAGVSTSRPVAPGTSQLLGKRKIQDLV 366
Query: 412 NQIDPSERLDPDVEDILVDIAEDFVESVSS 441
Q+DP ++DP+VED++++IA+DF+ S ++
Sbjct: 367 AQLDPLGKVDPEVEDLMLEIADDFITSATA 396
>gi|255560645|ref|XP_002521336.1| protein with unknown function [Ricinus communis]
gi|223539414|gb|EEF41004.1| protein with unknown function [Ricinus communis]
Length = 523
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 368 QKPSSLALVQPNAVQTG----NQSKIAGTESDEFGNRILTKRSIQELVNQIDPSERLDPD 423
QK SL QP+A +G S GTE+ N++L KR IQ+LV+Q+D ++DP+
Sbjct: 333 QKSLSLTGSQPDATASGTTTPGGSSSQGTEAT---NQLLGKRKIQDLVSQVDSQGKVDPE 389
Query: 424 VEDILVDIAEDFVESVS 440
VE++L++IA+DF+++V+
Sbjct: 390 VEELLLEIADDFIDNVT 406
>gi|413951957|gb|AFW84606.1| hypothetical protein ZEAMMB73_782872 [Zea mays]
gi|413951958|gb|AFW84607.1| hypothetical protein ZEAMMB73_782872 [Zea mays]
Length = 551
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 38/46 (82%)
Query: 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
E +++L KR IQ+LV Q+DP ++DP+VED+L++IA+DF+ SV++
Sbjct: 404 EGTSQLLGKRKIQDLVAQVDPLGKVDPEVEDLLLEIADDFIGSVTA 449
>gi|224030295|gb|ACN34223.1| unknown [Zea mays]
Length = 550
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 38/46 (82%)
Query: 396 EFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESVSS 441
E +++L KR IQ+LV Q+DP ++DP+VED+L++IA+DF+ SV++
Sbjct: 403 EGTSQLLGKRKIQDLVAQVDPLGKVDPEVEDLLLEIADDFIGSVTA 448
>gi|345569741|gb|EGX52570.1| hypothetical protein AOL_s00007g558 [Arthrobotrys oligospora ATCC
24927]
Length = 647
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 393 ESDEFGNRILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFVESV 439
E DE +L+KR +QELV QIDP E LDP+VE+ ++++ +DFV+++
Sbjct: 526 ELDEASGGLLSKRKLQELVRQIDPDESLDPEVEESVLELTDDFVDTL 572
>gi|326516648|dbj|BAJ92479.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
Query: 361 RPPGSATQKPSSLAL---VQPNAVQTGNQSKIAGTESDEFGN----RILTKRSIQELVNQ 413
+ P SA KP+++A V P+ ++T +AG + G ++L KR I +LV Q
Sbjct: 298 KMPASAAWKPANMAGSQPVIPSTIRT-----VAGANALHRGGGNCSQLLGKRKIHDLVAQ 352
Query: 414 IDPSERLDPDVEDILVDIAEDFVESVSS 441
+DP +DP+VED++++IA+DF+ + +
Sbjct: 353 VDPLCEVDPEVEDLILEIADDFISTAAD 380
>gi|328697742|ref|XP_003240424.1| PREDICTED: hypothetical protein LOC100573350 [Acyrthosiphon pisum]
Length = 480
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 31/36 (86%)
Query: 401 ILTKRSIQELVNQIDPSERLDPDVEDILVDIAEDFV 436
+LTK ++ELV ++DP+E+L+ DVED+++ +++DFV
Sbjct: 374 LLTKARLRELVKEVDPNEQLEEDVEDLMLQLSDDFV 409
>gi|452002572|gb|EMD95030.1| hypothetical protein COCHEDRAFT_1222264 [Cochliobolus
heterostrophus C5]
Length = 657
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 398 GNRILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESVSS 441
G+R+L+KR + ELV Q+ E L P+VE+ ++ +A+DFV++V S
Sbjct: 546 GDRVLSKRKLDELVRQVTGGSEEALTPEVEEAVLQLADDFVDNVIS 591
>gi|451853005|gb|EMD66299.1| hypothetical protein COCSADRAFT_84405 [Cochliobolus sativus ND90Pr]
Length = 1153
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 398 GNRILTKRSIQELVNQI--DPSERLDPDVEDILVDIAEDFVESVSS 441
G+R+L+KR + ELV Q+ E L P+VE+ ++ +A+DFV++V S
Sbjct: 1038 GDRVLSKRKLDELVRQVTGGSEEALTPEVEEAVLQLADDFVDNVIS 1083
>gi|323456329|gb|EGB12196.1| hypothetical protein AURANDRAFT_70752 [Aureococcus anophagefferens]
Length = 1423
Score = 40.4 bits (93), Expect = 1.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 39 APSSQPPQQQQQTPP-TPSTPSSTTIPTSTPTTNTPNPNPSPSPSPAPPSRPTSLTP 94
AP+ +P ++ P P+ PS PT+ PT P P PSP+P+P P + P+ P
Sbjct: 924 APTPRPSREPTYAPSYAPTAPSYA--PTAAPTAREPTPGPSPAPTPRPSAAPSPGWP 978
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.121 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,209,919,145
Number of Sequences: 23463169
Number of extensions: 450017874
Number of successful extensions: 9091856
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 33442
Number of HSP's successfully gapped in prelim test: 153059
Number of HSP's that attempted gapping in prelim test: 4570051
Number of HSP's gapped (non-prelim): 1840642
length of query: 441
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 295
effective length of database: 8,933,572,693
effective search space: 2635403944435
effective search space used: 2635403944435
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 78 (34.7 bits)