Query 013515
Match_columns 441
No_of_seqs 327 out of 2855
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:02:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yxl_A PH0851 protein, 450AA l 100.0 3.4E-60 1.2E-64 490.3 30.8 385 32-441 11-443 (450)
2 1sqg_A SUN protein, FMU protei 100.0 1.9E-57 6.4E-62 467.3 30.2 377 32-441 5-423 (429)
3 2b9e_A NOL1/NOP2/SUN domain fa 100.0 1.7E-52 5.9E-57 411.4 26.1 267 165-441 7-295 (309)
4 3m6w_A RRNA methylase; rRNA me 100.0 1.2E-49 4.1E-54 409.3 16.9 267 153-441 17-294 (464)
5 1ixk_A Methyltransferase; open 100.0 5.7E-48 1.9E-52 381.2 20.2 283 140-441 14-309 (315)
6 3m4x_A NOL1/NOP2/SUN family pr 100.0 9.6E-49 3.3E-53 402.1 13.4 260 154-441 24-297 (456)
7 2frx_A Hypothetical protein YE 100.0 2.8E-47 9.7E-52 395.0 24.4 270 155-441 27-305 (479)
8 4fzv_A Putative methyltransfer 100.0 2.4E-44 8.2E-49 358.6 15.6 261 166-440 44-350 (359)
9 3ajd_A Putative methyltransfer 100.0 6.7E-43 2.3E-47 338.3 18.1 254 165-435 6-265 (274)
10 4dmg_A Putative uncharacterize 99.8 5.3E-18 1.8E-22 171.4 14.2 161 215-407 190-353 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.7 5.6E-17 1.9E-21 152.1 13.6 144 226-409 58-212 (232)
12 1wxx_A TT1595, hypothetical pr 99.7 3.4E-17 1.2E-21 165.3 11.0 163 215-408 187-353 (382)
13 2as0_A Hypothetical protein PH 99.7 1.9E-16 6.6E-21 160.5 11.8 155 216-397 194-353 (396)
14 3c0k_A UPF0064 protein YCCW; P 99.7 9.9E-17 3.4E-21 162.6 8.8 166 214-408 196-367 (396)
15 3v97_A Ribosomal RNA large sub 99.6 2.3E-16 7.9E-21 170.5 9.7 152 215-394 516-670 (703)
16 1yb2_A Hypothetical protein TA 99.6 9.4E-17 3.2E-21 154.6 4.2 199 162-409 30-233 (275)
17 2b78_A Hypothetical protein SM 99.6 1.2E-15 4.1E-20 154.1 10.2 157 215-398 188-350 (385)
18 2igt_A SAM dependent methyltra 99.6 2.7E-15 9.2E-20 148.4 11.7 166 215-407 126-298 (332)
19 3lpm_A Putative methyltransfer 99.6 4.1E-15 1.4E-19 141.8 11.4 167 220-409 20-197 (259)
20 3tma_A Methyltransferase; thum 99.6 4.6E-14 1.6E-18 140.8 16.2 148 225-409 187-335 (354)
21 1i1n_A Protein-L-isoaspartate 99.6 2.6E-14 9E-19 132.8 13.5 128 223-391 56-192 (226)
22 2b3t_A Protein methyltransfera 99.5 1E-13 3.4E-18 133.4 15.7 163 221-409 87-259 (276)
23 2frn_A Hypothetical protein PH 99.5 1.9E-14 6.5E-19 138.8 10.2 140 221-407 107-251 (278)
24 3axs_A Probable N(2),N(2)-dime 99.5 1E-14 3.5E-19 146.8 8.1 130 219-386 24-162 (392)
25 1tzv_A NUSB protein, N utiliza 99.5 1E-13 3.4E-18 120.2 13.1 115 31-149 5-129 (142)
26 3d3b_A Protein NUSB, N utiliza 99.5 1.2E-13 4E-18 119.6 13.2 115 32-149 9-131 (141)
27 3eey_A Putative rRNA methylase 99.5 8.2E-14 2.8E-18 126.6 12.7 172 238-435 19-195 (197)
28 2qm3_A Predicted methyltransfe 99.5 1.8E-13 6E-18 137.6 15.9 144 216-398 146-296 (373)
29 4df3_A Fibrillarin-like rRNA/T 99.5 3.2E-14 1.1E-18 133.2 9.4 99 223-323 52-157 (233)
30 2dul_A N(2),N(2)-dimethylguano 99.5 1.4E-14 4.9E-19 145.5 7.5 123 225-386 31-168 (378)
31 3e05_A Precorrin-6Y C5,15-meth 99.5 5.6E-13 1.9E-17 121.9 17.1 136 220-398 20-156 (204)
32 3njr_A Precorrin-6Y methylase; 99.5 4.3E-13 1.5E-17 123.2 16.3 137 224-409 38-176 (204)
33 3r2d_A Protein NUSB, N utiliza 99.5 2.5E-13 8.4E-18 118.5 12.4 116 31-149 5-130 (149)
34 3mb5_A SAM-dependent methyltra 99.5 1.8E-13 6.2E-18 129.5 12.4 99 221-323 73-172 (255)
35 3tfw_A Putative O-methyltransf 99.5 1E-13 3.5E-18 131.3 10.6 149 225-408 47-206 (248)
36 3mti_A RRNA methylase; SAM-dep 99.5 2.1E-13 7.1E-18 122.6 11.7 142 239-409 20-165 (185)
37 3a27_A TYW2, uncharacterized p 99.5 1.5E-13 5E-18 132.2 11.3 125 223-388 101-225 (272)
38 3k6r_A Putative transferase PH 99.5 1.1E-13 3.8E-18 133.0 9.7 96 222-325 108-204 (278)
39 3evz_A Methyltransferase; NYSG 99.5 1.5E-12 5.2E-17 121.1 16.3 148 238-409 52-202 (230)
40 1o54_A SAM-dependent O-methylt 99.4 6.4E-13 2.2E-17 127.7 13.6 144 228-418 99-244 (277)
41 2pwy_A TRNA (adenine-N(1)-)-me 99.4 6.3E-13 2.1E-17 125.7 12.9 142 225-412 80-223 (258)
42 3bt7_A TRNA (uracil-5-)-methyl 99.4 3.4E-13 1.2E-17 135.3 11.3 87 235-325 208-307 (369)
43 3u81_A Catechol O-methyltransf 99.4 6.5E-13 2.2E-17 123.3 12.2 147 223-407 40-191 (221)
44 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.2E-12 4.1E-17 134.0 14.2 91 233-326 278-369 (433)
45 2ozv_A Hypothetical protein AT 99.4 5.3E-13 1.8E-17 127.4 9.8 136 229-380 24-169 (260)
46 1eyv_A NUSB protein, N-utilizi 99.4 2.6E-12 8.9E-17 112.9 12.9 120 31-152 10-140 (156)
47 1nv8_A HEMK protein; class I a 99.4 2.4E-12 8.1E-17 124.5 13.3 99 223-328 102-207 (284)
48 1wy7_A Hypothetical protein PH 99.4 4.4E-12 1.5E-16 116.0 14.3 124 238-407 46-169 (207)
49 3duw_A OMT, O-methyltransferas 99.4 5.7E-13 2E-17 123.5 8.3 148 225-407 42-202 (223)
50 2ift_A Putative methylase HI07 99.4 9.5E-13 3.3E-17 120.6 9.7 80 241-323 53-135 (201)
51 3r3h_A O-methyltransferase, SA 99.4 1.3E-13 4.4E-18 130.3 3.7 152 221-407 40-205 (242)
52 2gpy_A O-methyltransferase; st 99.4 6.4E-13 2.2E-17 124.2 8.4 130 219-384 32-163 (233)
53 1i9g_A Hypothetical protein RV 99.4 2.9E-12 9.8E-17 122.9 12.6 96 224-322 82-180 (280)
54 3dou_A Ribosomal RNA large sub 99.4 1.7E-12 5.7E-17 118.2 9.9 149 239-429 23-181 (191)
55 3tm4_A TRNA (guanine N2-)-meth 99.4 1.8E-12 6.1E-17 130.2 10.4 141 230-409 207-348 (373)
56 2yx1_A Hypothetical protein MJ 99.3 3E-12 1E-16 126.7 11.3 100 240-385 194-295 (336)
57 3dr5_A Putative O-methyltransf 99.3 1.7E-12 5.8E-17 120.9 8.9 125 224-384 36-166 (221)
58 3p9n_A Possible methyltransfer 99.3 3.9E-12 1.3E-16 114.9 11.0 82 240-324 43-124 (189)
59 4dzr_A Protein-(glutamine-N5) 99.3 3.8E-13 1.3E-17 123.1 3.9 182 221-414 6-193 (215)
60 3c3y_A Pfomt, O-methyltransfer 99.3 1.7E-12 5.9E-17 122.0 7.3 128 223-385 52-185 (237)
61 2yxd_A Probable cobalt-precorr 99.3 2.4E-11 8.1E-16 108.1 14.1 117 223-383 17-133 (183)
62 1yzh_A TRNA (guanine-N(7)-)-me 99.3 6.3E-12 2.1E-16 115.9 10.6 116 240-381 40-156 (214)
63 1nt2_A Fibrillarin-like PRE-rR 99.3 1.1E-11 3.6E-16 114.5 12.1 82 237-321 53-134 (210)
64 2jjq_A Uncharacterized RNA met 99.3 1.2E-11 4.2E-16 126.0 13.7 79 239-326 288-366 (425)
65 3ntv_A MW1564 protein; rossman 99.3 4.5E-12 1.5E-16 118.6 9.5 124 220-381 50-176 (232)
66 3dh0_A SAM dependent methyltra 99.3 3.3E-11 1.1E-15 110.9 15.0 141 231-409 27-177 (219)
67 2fpo_A Methylase YHHF; structu 99.3 2.9E-12 9.8E-17 117.4 7.6 79 241-323 54-132 (202)
68 1xdz_A Methyltransferase GIDB; 99.3 1.7E-11 5.9E-16 115.1 12.9 131 238-409 67-198 (240)
69 3c3p_A Methyltransferase; NP_9 99.3 2.8E-12 9.6E-17 117.8 7.2 126 221-384 36-163 (210)
70 3gdh_A Trimethylguanosine synt 99.3 3.6E-12 1.2E-16 119.5 7.6 102 221-329 56-160 (241)
71 3lbf_A Protein-L-isoaspartate 99.3 1.9E-11 6.6E-16 111.9 12.0 98 220-323 56-153 (210)
72 1dus_A MJ0882; hypothetical pr 99.3 3.1E-11 1.1E-15 108.2 12.9 119 228-384 39-160 (194)
73 1sui_A Caffeoyl-COA O-methyltr 99.3 5.8E-12 2E-16 119.2 8.1 125 222-381 60-190 (247)
74 2h1r_A Dimethyladenosine trans 99.3 4.4E-12 1.5E-16 123.5 7.3 95 223-325 24-118 (299)
75 3g89_A Ribosomal RNA small sub 99.3 1.3E-11 4.5E-16 117.0 10.3 130 239-409 78-208 (249)
76 3tr6_A O-methyltransferase; ce 99.3 3.6E-12 1.2E-16 118.1 6.2 126 223-383 46-176 (225)
77 4dcm_A Ribosomal RNA large sub 99.3 3.7E-11 1.3E-15 120.7 13.9 138 226-397 207-348 (375)
78 2fca_A TRNA (guanine-N(7)-)-me 99.3 6.5E-12 2.2E-16 116.1 7.8 116 240-381 37-153 (213)
79 3hm2_A Precorrin-6Y C5,15-meth 99.3 3.7E-11 1.3E-15 106.6 12.5 135 220-398 5-141 (178)
80 1m6y_A S-adenosyl-methyltransf 99.2 7.1E-12 2.4E-16 122.0 7.4 92 232-325 17-110 (301)
81 3fpf_A Mtnas, putative unchara 99.2 5.2E-11 1.8E-15 114.9 13.3 106 235-381 116-222 (298)
82 3kr9_A SAM-dependent methyltra 99.2 1.1E-10 3.7E-15 108.6 14.4 125 239-409 13-139 (225)
83 3dmg_A Probable ribosomal RNA 99.2 7.4E-11 2.5E-15 118.6 14.3 122 240-397 232-354 (381)
84 2b25_A Hypothetical protein; s 99.2 9.8E-11 3.3E-15 115.6 14.7 98 224-322 88-196 (336)
85 1xxl_A YCGJ protein; structura 99.2 5.8E-11 2E-15 111.3 12.3 90 225-320 5-94 (239)
86 1nkv_A Hypothetical protein YJ 99.2 1.1E-10 3.8E-15 110.0 14.2 115 230-382 25-141 (256)
87 2esr_A Methyltransferase; stru 99.2 2.6E-11 8.9E-16 108.0 9.3 87 233-323 22-110 (177)
88 3kkz_A Uncharacterized protein 99.2 6.3E-11 2.2E-15 112.8 12.5 112 239-388 44-157 (267)
89 2bm8_A Cephalosporin hydroxyla 99.2 1.5E-11 5.2E-16 115.5 8.0 147 222-411 61-217 (236)
90 1vl5_A Unknown conserved prote 99.2 6.8E-11 2.3E-15 112.0 12.2 100 215-320 11-110 (260)
91 3vc1_A Geranyl diphosphate 2-C 99.2 1.1E-10 3.7E-15 114.0 13.9 123 225-385 100-225 (312)
92 3lec_A NADB-rossmann superfami 99.2 1.7E-10 5.7E-15 107.6 14.3 125 239-409 19-145 (230)
93 3f4k_A Putative methyltransfer 99.2 9.4E-11 3.2E-15 110.6 12.9 111 238-386 43-155 (257)
94 2f8l_A Hypothetical protein LM 99.2 3.4E-11 1.1E-15 119.5 10.2 141 238-397 127-273 (344)
95 2okc_A Type I restriction enzy 99.2 2.9E-11 9.9E-16 124.2 10.0 156 220-397 150-326 (445)
96 4gek_A TRNA (CMO5U34)-methyltr 99.2 4E-11 1.4E-15 114.4 10.1 88 225-319 56-145 (261)
97 3cbg_A O-methyltransferase; cy 99.2 2.2E-11 7.5E-16 114.0 8.0 148 224-406 55-216 (232)
98 2yvl_A TRMI protein, hypotheti 99.2 2.1E-10 7.1E-15 107.6 14.7 90 227-322 77-167 (248)
99 1inl_A Spermidine synthase; be 99.2 1.2E-11 4E-16 120.3 6.2 128 241-398 90-224 (296)
100 1g8a_A Fibrillarin-like PRE-rR 99.2 1.2E-10 4.2E-15 108.0 12.9 82 239-322 71-152 (227)
101 3grz_A L11 mtase, ribosomal pr 99.2 1.2E-10 4.2E-15 106.2 12.6 131 231-409 48-181 (205)
102 1l3i_A Precorrin-6Y methyltran 99.2 1.3E-10 4.5E-15 103.9 12.5 131 224-398 16-148 (192)
103 2fhp_A Methylase, putative; al 99.2 7.4E-11 2.5E-15 105.6 9.8 88 234-323 36-126 (187)
104 2pbf_A Protein-L-isoaspartate 99.2 4.8E-11 1.6E-15 110.7 8.8 92 230-324 67-173 (227)
105 3dxy_A TRNA (guanine-N(7)-)-me 99.2 2.9E-10 9.8E-15 105.5 13.9 81 240-322 33-114 (218)
106 3gnl_A Uncharacterized protein 99.2 2.4E-10 8.1E-15 107.4 13.4 123 239-407 19-143 (244)
107 1fbn_A MJ fibrillarin homologu 99.2 9.8E-11 3.4E-15 109.2 10.6 79 237-322 70-152 (230)
108 2plw_A Ribosomal RNA methyltra 99.2 2.3E-10 8E-15 103.8 12.9 136 239-414 20-180 (201)
109 2yxe_A Protein-L-isoaspartate 99.2 1.8E-10 6.2E-15 105.8 12.1 100 221-323 57-156 (215)
110 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.4E-10 4.8E-15 108.2 11.4 84 237-322 73-156 (233)
111 2vdv_E TRNA (guanine-N(7)-)-me 99.2 3.8E-11 1.3E-15 113.3 7.1 118 239-381 47-173 (246)
112 3ldu_A Putative methylase; str 99.2 6E-10 2E-14 112.2 16.3 106 214-323 162-311 (385)
113 1o9g_A RRNA methyltransferase; 99.1 5.5E-11 1.9E-15 112.3 8.2 119 240-383 50-216 (250)
114 2avd_A Catechol-O-methyltransf 99.1 2.9E-11 1E-15 112.3 5.9 127 222-383 50-181 (229)
115 3k0b_A Predicted N6-adenine-sp 99.1 8.8E-10 3E-14 111.2 16.7 106 214-323 168-317 (393)
116 1r18_A Protein-L-isoaspartate( 99.1 8.2E-11 2.8E-15 109.4 8.5 99 222-323 63-173 (227)
117 1jg1_A PIMT;, protein-L-isoasp 99.1 2E-10 6.8E-15 107.4 11.1 100 219-323 69-168 (235)
118 1dl5_A Protein-L-isoaspartate 99.1 2.8E-10 9.7E-15 111.5 12.6 97 225-324 59-155 (317)
119 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.8E-10 6.1E-15 108.2 10.5 136 239-408 44-190 (235)
120 1ej0_A FTSJ; methyltransferase 99.1 1.8E-10 6.1E-15 101.4 9.8 121 239-397 20-149 (180)
121 2ih2_A Modification methylase 99.1 1.8E-10 6.2E-15 116.9 10.5 139 219-383 17-166 (421)
122 3dlc_A Putative S-adenosyl-L-m 99.1 6E-10 2E-14 101.9 12.7 115 230-382 33-149 (219)
123 1ws6_A Methyltransferase; stru 99.1 7.8E-11 2.7E-15 103.7 6.5 80 241-324 41-121 (171)
124 3hem_A Cyclopropane-fatty-acyl 99.1 7.6E-10 2.6E-14 107.3 14.1 126 231-387 62-189 (302)
125 3ldg_A Putative uncharacterize 99.1 1E-09 3.5E-14 110.3 15.4 106 214-323 161-310 (384)
126 2h00_A Methyltransferase 10 do 99.1 1E-09 3.5E-14 103.6 14.5 86 241-327 65-154 (254)
127 2hnk_A SAM-dependent O-methylt 99.1 6.9E-11 2.4E-15 110.8 6.2 126 224-384 43-184 (239)
128 3bus_A REBM, methyltransferase 99.1 1.1E-09 3.7E-14 104.2 14.3 118 229-383 49-168 (273)
129 2ar0_A M.ecoki, type I restric 99.1 2.2E-10 7.6E-15 120.2 10.3 159 219-397 147-330 (541)
130 1vbf_A 231AA long hypothetical 99.1 3.1E-10 1.1E-14 105.3 10.2 96 220-323 49-144 (231)
131 3q87_B N6 adenine specific DNA 99.1 2.8E-10 9.7E-15 101.1 9.5 81 227-324 7-89 (170)
132 2xvm_A Tellurite resistance pr 99.1 8E-10 2.7E-14 99.6 12.6 87 229-322 20-106 (199)
133 1jsx_A Glucose-inhibited divis 99.1 1.3E-09 4.6E-14 99.2 12.9 119 241-409 65-184 (207)
134 2pjd_A Ribosomal RNA small sub 99.0 1E-09 3.4E-14 108.8 12.4 135 227-397 182-317 (343)
135 3gu3_A Methyltransferase; alph 99.0 7.6E-10 2.6E-14 106.5 11.1 119 228-383 9-128 (284)
136 3jwh_A HEN1; methyltransferase 99.0 9.9E-10 3.4E-14 101.0 11.2 119 230-382 18-142 (217)
137 1ne2_A Hypothetical protein TA 99.0 1.1E-09 3.9E-14 99.4 11.2 73 238-323 48-120 (200)
138 3ll7_A Putative methyltransfer 99.0 1.8E-10 6E-15 116.3 6.3 82 241-326 93-176 (410)
139 3orh_A Guanidinoacetate N-meth 99.0 2E-10 7E-15 107.7 6.3 112 239-381 58-170 (236)
140 2nyu_A Putative ribosomal RNA 99.0 1.3E-09 4.3E-14 98.4 11.1 113 239-383 20-147 (196)
141 2o57_A Putative sarcosine dime 99.0 2.3E-09 7.9E-14 103.4 13.3 121 226-383 63-189 (297)
142 3gru_A Dimethyladenosine trans 99.0 1.2E-09 4E-14 105.9 10.7 94 223-324 32-125 (295)
143 3ofk_A Nodulation protein S; N 99.0 1.3E-09 4.6E-14 99.9 10.5 133 228-398 38-177 (216)
144 1kpg_A CFA synthase;, cyclopro 99.0 4E-09 1.4E-13 101.2 14.2 115 232-384 55-171 (287)
145 2fyt_A Protein arginine N-meth 99.0 9.9E-10 3.4E-14 108.8 10.1 82 235-322 58-140 (340)
146 3uwp_A Histone-lysine N-methyl 99.0 1.5E-09 5.2E-14 108.7 11.4 91 231-323 163-262 (438)
147 1zx0_A Guanidinoacetate N-meth 99.0 3.6E-10 1.2E-14 105.7 6.2 112 239-383 58-172 (236)
148 3bkx_A SAM-dependent methyltra 99.0 2.1E-09 7.1E-14 102.4 11.5 95 225-322 27-131 (275)
149 3jwg_A HEN1, methyltransferase 99.0 2E-09 6.9E-14 99.0 10.9 86 230-319 18-108 (219)
150 1zq9_A Probable dimethyladenos 99.0 2E-09 6.9E-14 103.9 11.3 96 223-326 10-106 (285)
151 3dtn_A Putative methyltransfer 99.0 1.3E-09 4.4E-14 101.3 9.6 117 232-385 34-152 (234)
152 2kw5_A SLR1183 protein; struct 99.0 3.4E-09 1.2E-13 96.1 12.2 106 239-384 28-134 (202)
153 3mgg_A Methyltransferase; NYSG 99.0 2.4E-09 8.3E-14 102.1 11.6 82 236-321 32-113 (276)
154 1ve3_A Hypothetical protein PH 99.0 1.7E-09 5.7E-14 99.8 9.9 107 240-383 37-144 (227)
155 1pjz_A Thiopurine S-methyltran 99.0 8.3E-10 2.9E-14 101.0 7.7 134 236-408 17-171 (203)
156 4fsd_A Arsenic methyltransfera 99.0 2.2E-09 7.7E-14 107.9 11.3 108 239-381 81-203 (383)
157 2y1w_A Histone-arginine methyl 99.0 1.8E-09 6.1E-14 107.2 10.4 115 234-385 43-159 (348)
158 3p2e_A 16S rRNA methylase; met 99.0 8.5E-10 2.9E-14 102.8 7.4 110 240-379 23-137 (225)
159 2p35_A Trans-aconitate 2-methy 99.0 5E-09 1.7E-13 98.6 12.8 117 225-383 17-134 (259)
160 2fk8_A Methoxy mycolic acid sy 99.0 4.2E-09 1.4E-13 102.8 12.6 117 232-386 81-199 (318)
161 3m70_A Tellurite resistance pr 98.9 3E-09 1E-13 102.1 11.2 82 233-322 112-193 (286)
162 2nxc_A L11 mtase, ribosomal pr 98.9 2.6E-09 8.9E-14 101.3 10.3 122 239-409 118-240 (254)
163 3mq2_A 16S rRNA methyltransfer 98.9 9.6E-10 3.3E-14 101.2 7.0 115 234-380 20-139 (218)
164 3adn_A Spermidine synthase; am 98.9 1.9E-09 6.4E-14 104.6 9.4 113 240-383 82-200 (294)
165 3q7e_A Protein arginine N-meth 98.9 1.7E-09 5.9E-14 107.4 9.3 112 239-385 64-177 (349)
166 2pxx_A Uncharacterized protein 98.9 4.6E-09 1.6E-13 95.7 11.2 120 240-383 41-161 (215)
167 1g6q_1 HnRNP arginine N-methyl 98.9 2E-09 6.9E-14 106.0 9.3 82 237-324 34-116 (328)
168 3ocj_A Putative exported prote 98.9 1.3E-09 4.3E-14 106.0 7.7 113 238-383 115-229 (305)
169 3ujc_A Phosphoethanolamine N-m 98.9 2.1E-09 7.2E-14 101.4 8.4 115 232-383 46-161 (266)
170 2gb4_A Thiopurine S-methyltran 98.9 9.3E-09 3.2E-13 97.4 12.6 78 237-319 64-158 (252)
171 1u2z_A Histone-lysine N-methyl 98.9 1.5E-08 5E-13 103.1 14.6 89 233-322 234-332 (433)
172 2p41_A Type II methyltransfera 98.9 1E-09 3.4E-14 107.1 5.8 78 239-328 80-162 (305)
173 3r0q_C Probable protein argini 98.9 2.3E-09 7.9E-14 107.6 8.6 113 237-385 59-173 (376)
174 3htx_A HEN1; HEN1, small RNA m 98.9 8.1E-09 2.8E-13 110.9 13.1 119 232-383 712-836 (950)
175 3g5t_A Trans-aconitate 3-methy 98.9 6.6E-09 2.3E-13 100.5 11.4 82 239-320 34-120 (299)
176 3ou2_A SAM-dependent methyltra 98.9 7.2E-09 2.5E-13 94.7 10.9 112 232-384 37-149 (218)
177 4htf_A S-adenosylmethionine-de 98.9 6.1E-09 2.1E-13 99.9 10.8 105 241-382 68-174 (285)
178 2oyr_A UPF0341 protein YHIQ; a 98.9 2.1E-09 7.2E-14 102.1 7.3 92 228-324 73-175 (258)
179 1ri5_A MRNA capping enzyme; me 98.9 7.1E-09 2.4E-13 99.6 11.1 113 239-383 62-176 (298)
180 3lkd_A Type I restriction-modi 98.9 2.4E-08 8.3E-13 104.5 15.6 106 219-326 195-310 (542)
181 2r6z_A UPF0341 protein in RSP 98.9 4.7E-10 1.6E-14 106.8 2.3 92 230-324 72-172 (258)
182 3lcc_A Putative methyl chlorid 98.9 9.9E-09 3.4E-13 95.5 11.3 128 242-409 67-203 (235)
183 3g5l_A Putative S-adenosylmeth 98.9 6.3E-09 2.1E-13 97.9 9.9 109 234-382 37-146 (253)
184 3cgg_A SAM-dependent methyltra 98.9 2.4E-08 8.4E-13 89.2 13.4 135 239-417 44-179 (195)
185 3tqs_A Ribosomal RNA small sub 98.9 6E-09 2E-13 98.9 9.6 90 228-323 16-106 (255)
186 2p8j_A S-adenosylmethionine-de 98.9 7.7E-09 2.6E-13 94.1 10.0 111 238-384 20-131 (209)
187 2yqz_A Hypothetical protein TT 98.9 1.1E-08 3.7E-13 96.4 11.0 76 238-320 36-111 (263)
188 1mjf_A Spermidine synthase; sp 98.8 1.9E-09 6.6E-14 103.8 5.7 111 240-384 74-196 (281)
189 3hnr_A Probable methyltransfer 98.8 1.1E-08 3.9E-13 93.8 10.6 109 236-385 40-149 (220)
190 3h2b_A SAM-dependent methyltra 98.8 1.3E-08 4.5E-13 92.2 10.9 133 232-409 33-178 (203)
191 3sm3_A SAM-dependent methyltra 98.8 8.4E-09 2.9E-13 95.3 9.7 110 240-384 29-144 (235)
192 3bzb_A Uncharacterized protein 98.8 5.8E-09 2E-13 100.4 8.7 82 239-322 77-173 (281)
193 3v97_A Ribosomal RNA large sub 98.8 2.1E-08 7.1E-13 108.4 14.0 109 214-323 157-313 (703)
194 2ex4_A Adrenal gland protein A 98.8 5.5E-09 1.9E-13 97.6 8.3 131 241-409 79-221 (241)
195 3ege_A Putative methyltransfer 98.8 6.4E-09 2.2E-13 98.6 8.6 111 229-383 22-132 (261)
196 3e23_A Uncharacterized protein 98.8 1.5E-08 5E-13 92.6 10.4 126 238-409 40-178 (211)
197 4hc4_A Protein arginine N-meth 98.8 5.8E-09 2E-13 104.3 8.3 76 240-322 82-158 (376)
198 3g07_A 7SK snRNA methylphospha 98.8 1.8E-08 6.2E-13 97.4 11.4 49 241-290 46-94 (292)
199 1qam_A ERMC' methyltransferase 98.8 1.4E-08 4.6E-13 95.8 10.3 93 223-323 12-104 (244)
200 3b3j_A Histone-arginine methyl 98.8 1E-08 3.5E-13 106.0 10.1 79 237-322 154-233 (480)
201 3bkw_A MLL3908 protein, S-aden 98.8 1.2E-08 4E-13 95.0 9.6 110 232-381 34-144 (243)
202 1wzn_A SAM-dependent methyltra 98.8 2.8E-08 9.4E-13 93.3 12.1 74 238-319 38-111 (252)
203 3ccf_A Cyclopropane-fatty-acyl 98.8 1.1E-08 3.8E-13 97.8 9.3 78 231-320 47-124 (279)
204 3iv6_A Putative Zn-dependent a 98.8 1.4E-08 4.7E-13 96.7 9.8 84 230-322 34-119 (261)
205 3g2m_A PCZA361.24; SAM-depende 98.8 1.2E-08 4.2E-13 98.6 9.6 117 232-385 74-194 (299)
206 1iy9_A Spermidine synthase; ro 98.8 1.2E-08 4.1E-13 97.9 9.4 112 241-383 75-191 (275)
207 3i9f_A Putative type 11 methyl 98.8 1.8E-08 6E-13 88.7 9.8 125 235-410 11-145 (170)
208 1xtp_A LMAJ004091AAA; SGPP, st 98.8 1.4E-08 4.8E-13 95.2 9.4 135 235-409 87-234 (254)
209 1yub_A Ermam, rRNA methyltrans 98.8 1.1E-09 3.8E-14 103.2 1.7 96 223-326 11-106 (245)
210 1y8c_A S-adenosylmethionine-de 98.8 1.9E-08 6.6E-13 93.5 10.2 115 232-382 26-143 (246)
211 3d2l_A SAM-dependent methyltra 98.8 1.2E-08 4.2E-13 94.9 8.8 73 240-321 32-104 (243)
212 2o07_A Spermidine synthase; st 98.8 8.1E-09 2.8E-13 100.6 7.8 114 239-383 93-211 (304)
213 3l8d_A Methyltransferase; stru 98.8 2.1E-08 7.2E-13 93.3 10.2 104 240-384 52-156 (242)
214 3khk_A Type I restriction-modi 98.8 1.2E-08 4E-13 107.1 9.0 171 219-397 223-414 (544)
215 2pt6_A Spermidine synthase; tr 98.8 6.2E-09 2.1E-13 102.2 6.0 113 240-383 115-232 (321)
216 3thr_A Glycine N-methyltransfe 98.8 1.8E-08 6E-13 96.9 9.0 123 231-383 47-177 (293)
217 3fut_A Dimethyladenosine trans 98.7 1.3E-08 4.4E-13 97.4 7.8 90 226-324 32-121 (271)
218 3m33_A Uncharacterized protein 98.7 2.4E-08 8.1E-13 92.6 9.4 71 240-320 47-118 (226)
219 1wg8_A Predicted S-adenosylmet 98.7 7.3E-09 2.5E-13 98.6 5.9 87 232-325 13-101 (285)
220 4hg2_A Methyltransferase type 98.7 1.1E-08 3.9E-13 97.1 7.1 112 241-397 39-153 (257)
221 1xj5_A Spermidine synthase 1; 98.7 1.8E-08 6.1E-13 99.4 8.5 118 238-385 117-239 (334)
222 2i7c_A Spermidine synthase; tr 98.7 1.4E-08 4.7E-13 97.9 7.5 116 238-384 75-195 (283)
223 3bwc_A Spermidine synthase; SA 98.7 2.9E-08 9.9E-13 96.6 9.5 130 239-398 93-228 (304)
224 2vdw_A Vaccinia virus capping 98.7 3.8E-08 1.3E-12 95.7 9.9 111 241-383 48-171 (302)
225 3uzu_A Ribosomal RNA small sub 98.7 4.5E-08 1.6E-12 94.0 10.2 93 228-324 29-125 (279)
226 2xyq_A Putative 2'-O-methyl tr 98.7 1.5E-08 5E-13 97.9 6.7 105 237-381 59-171 (290)
227 3e8s_A Putative SAM dependent 98.7 5.4E-08 1.8E-12 89.2 10.0 106 233-382 44-153 (227)
228 2qfm_A Spermine synthase; sper 98.7 1.5E-08 5.1E-13 100.2 6.6 134 241-398 188-331 (364)
229 1uir_A Polyamine aminopropyltr 98.7 2.3E-08 7.9E-13 97.8 7.9 116 240-383 76-197 (314)
230 3fzg_A 16S rRNA methylase; met 98.7 2.2E-08 7.6E-13 90.0 6.7 73 240-319 48-121 (200)
231 2p7i_A Hypothetical protein; p 98.7 4.1E-08 1.4E-12 91.3 8.9 107 233-382 33-142 (250)
232 3ftd_A Dimethyladenosine trans 98.7 2.8E-08 9.7E-13 93.9 7.8 94 223-324 13-106 (249)
233 3bxo_A N,N-dimethyltransferase 98.7 1E-07 3.5E-12 88.3 11.5 105 240-384 39-144 (239)
234 3bgv_A MRNA CAP guanine-N7 met 98.7 1E-07 3.5E-12 92.8 11.7 113 240-383 33-157 (313)
235 2gs9_A Hypothetical protein TT 98.7 4.4E-08 1.5E-12 89.3 8.3 98 241-383 36-134 (211)
236 2b2c_A Spermidine synthase; be 98.7 1.7E-08 5.8E-13 98.7 5.7 115 240-385 107-226 (314)
237 3tka_A Ribosomal RNA small sub 98.7 1.3E-08 4.6E-13 98.9 4.8 91 233-327 49-142 (347)
238 3s1s_A Restriction endonucleas 98.6 7.8E-08 2.7E-12 103.2 10.9 159 220-397 294-484 (878)
239 2wa2_A Non-structural protein 98.6 1.1E-08 3.6E-13 98.3 3.8 73 239-322 80-157 (276)
240 2oxt_A Nucleoside-2'-O-methylt 98.6 1.5E-08 5E-13 96.8 4.2 73 239-322 72-149 (265)
241 1x19_A CRTF-related protein; m 98.6 4.2E-07 1.4E-11 90.2 14.6 119 228-383 177-297 (359)
242 2r3s_A Uncharacterized protein 98.6 2.6E-07 9.1E-12 90.4 11.9 82 232-319 154-238 (335)
243 2avn_A Ubiquinone/menaquinone 98.6 1.3E-07 4.4E-12 89.5 8.9 100 241-383 54-154 (260)
244 3ggd_A SAM-dependent methyltra 98.6 1.1E-07 3.6E-12 88.9 8.1 79 238-322 53-133 (245)
245 1qzz_A RDMB, aclacinomycin-10- 98.5 8.9E-07 3E-11 88.1 14.8 83 231-320 172-255 (374)
246 1p91_A Ribosomal RNA large sub 98.5 1.2E-07 4.1E-12 89.9 7.8 71 240-319 84-154 (269)
247 2cmg_A Spermidine synthase; tr 98.5 1.6E-07 5.6E-12 89.4 8.6 99 240-384 71-174 (262)
248 3dp7_A SAM-dependent methyltra 98.5 1.3E-06 4.3E-11 87.0 15.4 111 240-384 178-290 (363)
249 3gjy_A Spermidine synthase; AP 98.5 1.2E-07 4E-12 92.5 7.5 112 243-384 91-203 (317)
250 3gwz_A MMCR; methyltransferase 98.5 1.8E-06 6.2E-11 86.1 16.3 115 233-384 194-310 (369)
251 3pfg_A N-methyltransferase; N, 98.5 1.8E-07 6.3E-12 88.3 8.5 102 240-381 49-151 (263)
252 3hp7_A Hemolysin, putative; st 98.5 2.4E-07 8.2E-12 89.3 9.3 76 241-323 85-161 (291)
253 2aot_A HMT, histamine N-methyl 98.5 1.5E-07 5E-12 90.7 7.9 109 239-382 50-173 (292)
254 3dli_A Methyltransferase; PSI- 98.5 1.1E-07 3.8E-12 88.6 6.6 101 239-383 39-142 (240)
255 1qyr_A KSGA, high level kasuga 98.5 6.8E-08 2.3E-12 91.4 4.9 91 228-324 8-101 (252)
256 3ufb_A Type I restriction-modi 98.5 3.7E-07 1.3E-11 95.4 10.9 108 219-326 195-315 (530)
257 1vlm_A SAM-dependent methyltra 98.5 1.9E-07 6.4E-12 85.9 7.3 63 241-320 47-109 (219)
258 2a14_A Indolethylamine N-methy 98.5 1.6E-07 5.3E-12 89.2 6.9 114 238-382 52-198 (263)
259 1tw3_A COMT, carminomycin 4-O- 98.5 7.4E-07 2.5E-11 88.3 11.6 115 232-383 174-290 (360)
260 3cc8_A Putative methyltransfer 98.5 3.1E-07 1.1E-11 84.2 8.1 100 240-382 31-131 (230)
261 2i62_A Nicotinamide N-methyltr 98.4 1.9E-07 6.5E-12 87.9 6.4 138 239-409 54-235 (265)
262 3mcz_A O-methyltransferase; ad 98.4 1.2E-06 4.1E-11 86.5 11.1 113 236-382 173-288 (352)
263 2qe6_A Uncharacterized protein 98.4 4.4E-06 1.5E-10 79.8 13.8 112 240-384 76-199 (274)
264 2ip2_A Probable phenazine-spec 98.4 1.8E-06 6.1E-11 84.6 11.3 79 233-319 160-239 (334)
265 3frh_A 16S rRNA methylase; met 98.4 2.3E-06 7.8E-11 79.7 11.2 71 240-319 104-174 (253)
266 3i53_A O-methyltransferase; CO 98.3 3.3E-06 1.1E-10 82.7 12.4 74 239-319 167-241 (332)
267 3lcv_B Sisomicin-gentamicin re 98.3 7.9E-07 2.7E-11 83.6 7.2 73 241-319 132-204 (281)
268 3cvo_A Methyltransferase-like 98.3 2E-06 6.7E-11 78.4 9.6 79 240-322 29-131 (202)
269 3sso_A Methyltransferase; macr 98.3 4.8E-07 1.6E-11 90.4 5.7 100 241-382 216-325 (419)
270 2g72_A Phenylethanolamine N-me 98.3 3.2E-06 1.1E-10 81.0 11.0 111 240-380 70-214 (289)
271 4azs_A Methyltransferase WBDD; 98.3 1.2E-06 4.1E-11 92.5 8.0 75 241-319 66-140 (569)
272 2zfu_A Nucleomethylin, cerebra 98.3 1.2E-06 4.1E-11 79.9 6.9 117 232-409 58-175 (215)
273 2qy6_A UPF0209 protein YFCK; s 98.3 2.1E-06 7.2E-11 81.3 8.6 130 239-409 58-231 (257)
274 3giw_A Protein of unknown func 98.2 9.5E-06 3.3E-10 77.3 11.8 64 241-304 78-143 (277)
275 4auk_A Ribosomal RNA large sub 98.2 1.5E-06 5.2E-11 85.8 6.5 75 239-326 209-283 (375)
276 1af7_A Chemotaxis receptor met 98.2 7.5E-06 2.6E-10 78.3 10.1 107 241-379 105-250 (274)
277 3opn_A Putative hemolysin; str 98.1 2.9E-06 9.8E-11 79.2 6.4 43 241-285 37-79 (232)
278 2px2_A Genome polyprotein [con 98.1 5.9E-07 2E-11 83.7 1.5 77 239-328 71-153 (269)
279 4e2x_A TCAB9; kijanose, tetron 98.1 7.4E-07 2.5E-11 90.2 2.3 105 235-381 101-208 (416)
280 3g7u_A Cytosine-specific methy 98.0 1.1E-05 3.7E-10 80.6 7.7 82 243-331 3-89 (376)
281 3lst_A CALO1 methyltransferase 97.9 1.6E-05 5.6E-10 78.4 8.3 112 232-383 175-288 (348)
282 4a6d_A Hydroxyindole O-methylt 97.9 2.1E-05 7.3E-10 77.8 9.0 79 234-319 172-250 (353)
283 2c7p_A Modification methylase 97.9 2.4E-05 8.3E-10 76.7 8.2 79 242-331 11-89 (327)
284 1g55_A DNA cytosine methyltran 97.9 5.6E-06 1.9E-10 81.8 3.6 83 243-330 3-85 (343)
285 3gcz_A Polyprotein; flavivirus 97.9 6.9E-06 2.4E-10 77.8 3.6 82 239-328 88-170 (282)
286 3evf_A RNA-directed RNA polyme 97.8 1.3E-05 4.5E-10 75.8 5.2 83 239-328 72-154 (277)
287 2wk1_A NOVP; transferase, O-me 97.8 3.2E-05 1.1E-09 74.0 7.7 122 241-398 106-260 (282)
288 3eld_A Methyltransferase; flav 97.8 3.1E-05 1.1E-09 73.8 6.3 81 240-328 80-161 (300)
289 3o4f_A Spermidine synthase; am 97.7 0.00048 1.6E-08 66.1 14.6 84 236-323 79-167 (294)
290 1fp1_D Isoliquiritigenin 2'-O- 97.7 4.4E-05 1.5E-09 76.0 6.8 67 239-319 207-273 (372)
291 2oo3_A Protein involved in cat 97.7 3.1E-06 1.1E-10 80.5 -1.7 78 241-323 91-169 (283)
292 3reo_A (ISO)eugenol O-methyltr 97.7 6.8E-05 2.3E-09 74.6 7.4 102 239-384 201-303 (368)
293 3p9c_A Caffeic acid O-methyltr 97.6 0.00012 4.2E-09 72.6 9.0 102 239-384 199-301 (364)
294 3p8z_A Mtase, non-structural p 97.6 3.9E-05 1.3E-09 70.5 4.8 78 239-323 76-154 (267)
295 4gqb_A Protein arginine N-meth 97.6 0.00021 7E-09 75.7 9.9 120 242-396 358-484 (637)
296 3ua3_A Protein arginine N-meth 97.5 7.8E-05 2.7E-09 79.1 5.7 125 242-397 410-552 (745)
297 2ld4_A Anamorsin; methyltransf 97.4 5.3E-05 1.8E-09 66.7 2.4 59 237-319 8-69 (176)
298 2qrv_A DNA (cytosine-5)-methyl 97.3 0.00023 7.7E-09 68.7 6.0 85 240-330 14-100 (295)
299 3qv2_A 5-cytosine DNA methyltr 97.3 0.00013 4.5E-09 71.3 4.4 79 242-326 10-89 (327)
300 4h0n_A DNMT2; SAH binding, tra 97.3 0.00014 4.7E-09 71.4 4.4 83 244-331 5-87 (333)
301 3ubt_Y Modification methylase 97.3 0.00023 7.9E-09 69.5 5.7 79 243-331 1-79 (331)
302 1fp2_A Isoflavone O-methyltran 97.3 0.00035 1.2E-08 68.7 6.9 67 239-319 186-252 (352)
303 2zig_A TTHA0409, putative modi 97.3 0.00077 2.6E-08 64.9 9.0 48 240-290 234-281 (297)
304 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00017 5.7E-09 61.6 3.6 64 240-322 34-99 (153)
305 3lkz_A Non-structural protein 97.2 0.0024 8.2E-08 60.6 11.6 81 239-327 92-173 (321)
306 3r24_A NSP16, 2'-O-methyl tran 97.1 0.00073 2.5E-08 64.1 7.0 71 239-328 107-184 (344)
307 2py6_A Methyltransferase FKBM; 97.1 0.0011 3.9E-08 66.7 8.9 66 237-302 222-292 (409)
308 3c6k_A Spermine synthase; sper 97.1 0.0007 2.4E-08 67.1 6.7 133 240-397 204-347 (381)
309 1i4w_A Mitochondrial replicati 97.1 0.0016 5.3E-08 64.3 9.0 82 220-305 30-118 (353)
310 1zg3_A Isoflavanone 4'-O-methy 96.9 0.0012 4.1E-08 65.0 6.6 67 239-319 191-257 (358)
311 3me5_A Cytosine-specific methy 96.7 0.0012 4E-08 67.9 4.7 85 242-330 88-186 (482)
312 1g60_A Adenine-specific methyl 96.7 0.0022 7.5E-08 60.4 6.1 49 240-291 211-259 (260)
313 4dkj_A Cytosine-specific methy 96.0 0.0097 3.3E-07 59.7 6.9 88 243-331 11-143 (403)
314 3swr_A DNA (cytosine-5)-methyl 95.7 0.023 8E-07 63.1 8.8 82 242-329 540-634 (1002)
315 3vyw_A MNMC2; tRNA wobble urid 95.6 0.044 1.5E-06 52.6 9.3 129 241-409 96-244 (308)
316 4ft4_B DNA (cytosine-5)-methyl 95.5 0.037 1.3E-06 60.3 9.6 46 241-286 211-260 (784)
317 1y1p_A ARII, aldehyde reductas 95.2 0.73 2.5E-05 43.8 16.7 121 241-382 10-132 (342)
318 3av4_A DNA (cytosine-5)-methyl 94.8 0.058 2E-06 61.6 8.5 82 242-330 851-946 (1330)
319 1eg2_A Modification methylase 93.4 0.086 2.9E-06 51.0 5.5 49 239-290 240-291 (319)
320 1boo_A Protein (N-4 cytosine-s 93.0 0.069 2.4E-06 51.7 4.3 63 239-305 250-312 (323)
321 3two_A Mannitol dehydrogenase; 93.0 0.38 1.3E-05 46.7 9.6 69 236-319 171-240 (348)
322 3pvc_A TRNA 5-methylaminomethy 91.5 0.18 6E-06 54.0 5.5 129 241-408 58-228 (689)
323 3rih_A Short chain dehydrogena 91.1 0.25 8.6E-06 46.9 5.6 82 242-324 41-130 (293)
324 4fs3_A Enoyl-[acyl-carrier-pro 90.8 0.74 2.5E-05 42.6 8.5 85 241-325 5-98 (256)
325 3pk0_A Short-chain dehydrogena 90.3 0.8 2.7E-05 42.4 8.3 81 242-323 10-98 (262)
326 1xu9_A Corticosteroid 11-beta- 90.3 0.83 2.8E-05 42.7 8.5 78 242-320 28-113 (286)
327 2gn4_A FLAA1 protein, UDP-GLCN 89.5 0.69 2.4E-05 44.7 7.4 119 241-381 20-141 (344)
328 1fmc_A 7 alpha-hydroxysteroid 89.4 1.1 3.6E-05 40.9 8.2 80 242-323 11-98 (255)
329 1wma_A Carbonyl reductase [NAD 89.3 0.85 2.9E-05 41.8 7.6 80 242-323 4-92 (276)
330 4dvj_A Putative zinc-dependent 89.0 0.45 1.5E-05 46.6 5.6 49 241-294 171-221 (363)
331 2dph_A Formaldehyde dismutase; 88.8 0.74 2.5E-05 45.5 7.1 52 235-291 179-231 (398)
332 3rkr_A Short chain oxidoreduct 88.5 2.1 7.3E-05 39.3 9.7 81 241-323 28-116 (262)
333 4f6c_A AUSA reductase domain p 88.5 6 0.00021 39.0 13.7 81 241-323 68-160 (427)
334 1ja9_A 4HNR, 1,3,6,8-tetrahydr 88.3 0.76 2.6E-05 42.4 6.5 81 242-324 21-110 (274)
335 3e8x_A Putative NAD-dependent 88.0 3.2 0.00011 37.2 10.4 71 242-322 21-93 (236)
336 3lyl_A 3-oxoacyl-(acyl-carrier 88.0 2.6 8.9E-05 38.2 9.8 81 242-324 5-93 (247)
337 2zig_A TTHA0409, putative modi 87.8 0.35 1.2E-05 46.0 3.9 76 292-380 20-96 (297)
338 3qiv_A Short-chain dehydrogena 87.5 2.6 9.1E-05 38.3 9.6 81 241-323 8-96 (253)
339 3nzo_A UDP-N-acetylglucosamine 87.5 2.6 8.8E-05 41.6 10.2 120 242-382 35-165 (399)
340 3rku_A Oxidoreductase YMR226C; 87.5 4.1 0.00014 38.2 11.1 81 242-323 33-125 (287)
341 3oig_A Enoyl-[acyl-carrier-pro 87.4 2.2 7.4E-05 39.2 9.0 85 241-325 6-99 (266)
342 3tfo_A Putative 3-oxoacyl-(acy 87.3 2.3 7.9E-05 39.4 9.2 81 242-324 4-92 (264)
343 4g81_D Putative hexonate dehyd 87.3 2.2 7.4E-05 39.7 8.8 80 242-323 9-96 (255)
344 1yb1_A 17-beta-hydroxysteroid 87.2 2.3 7.7E-05 39.4 9.1 81 242-324 31-119 (272)
345 3l77_A Short-chain alcohol deh 87.0 2.1 7.2E-05 38.5 8.5 80 242-323 2-90 (235)
346 3tjr_A Short chain dehydrogena 86.9 1.3 4.4E-05 41.9 7.2 83 241-325 30-120 (301)
347 1xg5_A ARPG836; short chain de 86.8 2.2 7.5E-05 39.6 8.7 80 242-322 32-120 (279)
348 3o38_A Short chain dehydrogena 86.4 2.2 7.6E-05 39.2 8.4 83 242-325 22-113 (266)
349 3e9n_A Putative short-chain de 86.3 3.5 0.00012 37.3 9.7 76 242-324 5-86 (245)
350 4egf_A L-xylulose reductase; s 86.3 2.1 7.3E-05 39.5 8.3 82 242-325 20-110 (266)
351 3grk_A Enoyl-(acyl-carrier-pro 86.3 3.9 0.00013 38.4 10.2 81 241-323 30-119 (293)
352 3i1j_A Oxidoreductase, short c 86.2 3.7 0.00013 37.0 9.8 83 241-324 13-105 (247)
353 1kol_A Formaldehyde dehydrogen 86.0 1.5 5.3E-05 43.1 7.5 52 236-292 180-232 (398)
354 2efj_A 3,7-dimethylxanthine me 85.8 6.5 0.00022 38.8 11.8 75 242-319 53-155 (384)
355 3svt_A Short-chain type dehydr 85.8 2.4 8.1E-05 39.4 8.4 82 241-323 10-101 (281)
356 1pl8_A Human sorbitol dehydrog 85.6 1.7 5.8E-05 42.1 7.5 54 235-293 165-219 (356)
357 3s2e_A Zinc-containing alcohol 85.6 1.9 6.4E-05 41.4 7.8 53 235-293 160-213 (340)
358 3ftp_A 3-oxoacyl-[acyl-carrier 85.6 2.1 7.3E-05 39.7 8.0 82 241-324 27-116 (270)
359 3t4x_A Oxidoreductase, short c 85.3 3.5 0.00012 38.0 9.3 82 242-324 10-96 (267)
360 3ai3_A NADPH-sorbose reductase 85.2 2.2 7.5E-05 39.2 7.8 80 242-323 7-95 (263)
361 1xhl_A Short-chain dehydrogena 85.1 2.5 8.5E-05 39.8 8.3 81 242-323 26-116 (297)
362 3awd_A GOX2181, putative polyo 85.0 2.9 9.8E-05 38.1 8.4 79 242-322 13-99 (260)
363 3gaf_A 7-alpha-hydroxysteroid 84.8 1.9 6.5E-05 39.6 7.1 81 242-324 12-100 (256)
364 4ibo_A Gluconate dehydrogenase 84.7 1.8 6.3E-05 40.2 7.1 81 242-324 26-114 (271)
365 1f8f_A Benzyl alcohol dehydrog 84.7 1.8 6E-05 42.3 7.2 53 236-293 185-238 (371)
366 1geg_A Acetoin reductase; SDR 84.5 1.8 6.3E-05 39.6 6.9 79 243-323 3-89 (256)
367 3is3_A 17BETA-hydroxysteroid d 84.3 5.2 0.00018 36.8 10.0 122 242-382 18-153 (270)
368 1gee_A Glucose 1-dehydrogenase 84.2 2.9 9.8E-05 38.1 8.1 81 242-324 7-96 (261)
369 1xq1_A Putative tropinone redu 83.7 3.4 0.00012 37.7 8.4 79 242-322 14-101 (266)
370 2uvd_A 3-oxoacyl-(acyl-carrier 83.6 3 0.0001 37.9 7.8 81 242-324 4-93 (246)
371 1vl8_A Gluconate 5-dehydrogena 83.5 3.7 0.00013 37.9 8.6 81 242-324 21-110 (267)
372 1edo_A Beta-keto acyl carrier 83.5 3.5 0.00012 37.0 8.2 80 243-324 2-90 (244)
373 1mxh_A Pteridine reductase 2; 83.4 7 0.00024 35.9 10.5 81 242-324 11-105 (276)
374 3imf_A Short chain dehydrogena 83.4 2.9 9.8E-05 38.3 7.7 80 242-323 6-93 (257)
375 1xkq_A Short-chain reductase f 83.4 2.8 9.7E-05 38.9 7.8 82 242-324 6-97 (280)
376 2ph3_A 3-oxoacyl-[acyl carrier 83.3 3.6 0.00012 36.9 8.2 79 244-324 3-91 (245)
377 1yxm_A Pecra, peroxisomal tran 83.2 3.5 0.00012 38.6 8.3 80 242-323 18-110 (303)
378 3pgx_A Carveol dehydrogenase; 83.2 3.4 0.00012 38.3 8.2 82 241-324 14-116 (280)
379 3ius_A Uncharacterized conserv 83.0 13 0.00043 34.1 12.2 66 243-322 6-72 (286)
380 3f1l_A Uncharacterized oxidore 82.9 5 0.00017 36.5 9.1 81 242-323 12-102 (252)
381 3lf2_A Short chain oxidoreduct 82.7 5.6 0.00019 36.5 9.5 82 242-324 8-98 (265)
382 3pxx_A Carveol dehydrogenase; 82.6 7.9 0.00027 35.7 10.5 125 241-382 9-154 (287)
383 3f9i_A 3-oxoacyl-[acyl-carrier 82.5 4.3 0.00015 36.7 8.5 81 240-325 12-96 (249)
384 3oid_A Enoyl-[acyl-carrier-pro 82.4 3.3 0.00011 38.0 7.7 81 241-323 3-92 (258)
385 2rh8_A Anthocyanidin reductase 82.3 3.4 0.00012 39.1 8.0 78 242-322 9-89 (338)
386 4fc7_A Peroxisomal 2,4-dienoyl 82.1 3.6 0.00012 38.2 7.9 80 241-322 26-114 (277)
387 3r3s_A Oxidoreductase; structu 82.1 5.7 0.0002 37.2 9.4 123 241-382 48-186 (294)
388 2c07_A 3-oxoacyl-(acyl-carrier 82.0 3.4 0.00012 38.4 7.8 81 242-324 44-132 (285)
389 4eez_A Alcohol dehydrogenase 1 81.9 3.2 0.00011 39.8 7.7 53 236-293 158-211 (348)
390 3ps9_A TRNA 5-methylaminomethy 81.9 2 6.7E-05 45.7 6.6 128 242-408 67-236 (676)
391 4imr_A 3-oxoacyl-(acyl-carrier 81.9 2.8 9.7E-05 39.0 7.1 82 241-324 32-120 (275)
392 3ic5_A Putative saccharopine d 81.4 1.9 6.6E-05 33.7 5.0 73 241-322 4-78 (118)
393 3jv7_A ADH-A; dehydrogenase, n 81.3 2.8 9.4E-05 40.3 7.0 52 238-294 168-220 (345)
394 1e3j_A NADP(H)-dependent ketos 81.2 3.2 0.00011 40.1 7.4 53 235-293 162-215 (352)
395 3k31_A Enoyl-(acyl-carrier-pro 81.1 4.5 0.00015 38.0 8.3 82 241-324 29-119 (296)
396 2pnf_A 3-oxoacyl-[acyl-carrier 81.1 3.2 0.00011 37.4 7.0 81 242-324 7-96 (248)
397 3fpc_A NADP-dependent alcohol 81.0 2.3 7.8E-05 41.1 6.3 54 235-293 160-214 (352)
398 1sny_A Sniffer CG10964-PA; alp 80.8 3 0.0001 38.1 6.8 79 242-323 21-112 (267)
399 4e6p_A Probable sorbitol dehyd 80.5 3.6 0.00012 37.6 7.2 80 241-325 7-94 (259)
400 2hq1_A Glucose/ribitol dehydro 80.5 4.1 0.00014 36.7 7.5 81 242-324 5-94 (247)
401 2c29_D Dihydroflavonol 4-reduc 80.5 4.6 0.00016 38.2 8.2 79 242-322 5-86 (337)
402 3ksu_A 3-oxoacyl-acyl carrier 80.4 4.6 0.00016 37.1 7.9 123 241-382 10-148 (262)
403 3osu_A 3-oxoacyl-[acyl-carrier 80.4 4.6 0.00016 36.6 7.8 82 242-325 4-94 (246)
404 1uuf_A YAHK, zinc-type alcohol 80.3 2.6 8.9E-05 41.1 6.4 51 237-293 190-241 (369)
405 3oec_A Carveol dehydrogenase ( 80.2 5.1 0.00017 38.0 8.4 83 241-325 45-147 (317)
406 1zk4_A R-specific alcohol dehy 80.2 9.8 0.00033 34.1 10.0 79 242-323 6-92 (251)
407 4dmm_A 3-oxoacyl-[acyl-carrier 80.1 5 0.00017 37.1 8.1 82 242-325 28-118 (269)
408 3enk_A UDP-glucose 4-epimerase 80.1 0.95 3.3E-05 43.1 3.2 82 242-324 5-89 (341)
409 1g0o_A Trihydroxynaphthalene r 80.1 7.8 0.00027 35.9 9.5 81 242-324 29-118 (283)
410 1iy8_A Levodione reductase; ox 80.0 3.8 0.00013 37.7 7.2 80 242-323 13-102 (267)
411 2yut_A Putative short-chain ox 79.9 2.9 0.0001 36.5 6.1 72 244-323 2-76 (207)
412 3ioy_A Short-chain dehydrogena 79.6 8.7 0.0003 36.4 9.8 83 241-324 7-98 (319)
413 1boo_A Protein (N-4 cytosine-s 79.6 1.4 4.6E-05 42.5 4.0 70 292-380 13-83 (323)
414 4eso_A Putative oxidoreductase 79.5 4.9 0.00017 36.7 7.8 119 241-381 7-138 (255)
415 2bd0_A Sepiapterin reductase; 79.3 3.2 0.00011 37.4 6.3 79 243-323 3-96 (244)
416 4iin_A 3-ketoacyl-acyl carrier 79.2 6.5 0.00022 36.2 8.6 82 241-324 28-118 (271)
417 3afn_B Carbonyl reductase; alp 79.2 2.1 7.1E-05 38.8 5.1 80 242-323 7-95 (258)
418 2cfc_A 2-(R)-hydroxypropyl-COM 78.9 2.9 9.8E-05 37.8 5.9 80 242-323 2-90 (250)
419 1hxh_A 3BETA/17BETA-hydroxyste 78.8 13 0.00043 33.7 10.4 77 242-323 6-90 (253)
420 1w6u_A 2,4-dienoyl-COA reducta 78.8 4.8 0.00016 37.5 7.6 80 242-323 26-114 (302)
421 4ej6_A Putative zinc-binding d 78.7 4.5 0.00016 39.4 7.6 54 235-293 176-230 (370)
422 3h7a_A Short chain dehydrogena 78.5 3 0.0001 38.2 5.9 81 242-325 7-95 (252)
423 3dqp_A Oxidoreductase YLBE; al 78.3 2.4 8.2E-05 37.6 5.1 72 244-325 2-75 (219)
424 2pd6_A Estradiol 17-beta-dehyd 78.2 1.8 6.3E-05 39.5 4.4 82 242-324 7-103 (264)
425 2qhx_A Pteridine reductase 1; 78.2 7.6 0.00026 37.0 9.0 62 242-305 46-110 (328)
426 2rhc_B Actinorhodin polyketide 78.1 8.5 0.00029 35.5 9.1 80 242-323 22-109 (277)
427 1cyd_A Carbonyl reductase; sho 78.0 6.8 0.00023 35.0 8.2 78 241-324 6-87 (244)
428 3qlj_A Short chain dehydrogena 78.0 3.7 0.00012 39.1 6.6 83 241-325 26-126 (322)
429 1e7w_A Pteridine reductase; di 77.9 8.3 0.00028 36.0 9.0 62 242-305 9-73 (291)
430 2wsb_A Galactitol dehydrogenas 77.8 3.7 0.00013 37.1 6.3 79 241-324 10-96 (254)
431 3m6i_A L-arabinitol 4-dehydrog 77.8 3.8 0.00013 39.7 6.7 50 235-285 173-223 (363)
432 3qp9_A Type I polyketide synth 77.8 21 0.00071 36.6 12.6 87 239-327 248-356 (525)
433 3o26_A Salutaridine reductase; 77.3 3.9 0.00013 38.1 6.5 84 241-325 11-103 (311)
434 1x1t_A D(-)-3-hydroxybutyrate 77.2 5.9 0.0002 36.1 7.6 81 242-324 4-94 (260)
435 2h6e_A ADH-4, D-arabinose 1-de 77.2 5 0.00017 38.5 7.4 51 238-293 168-219 (344)
436 1sb8_A WBPP; epimerase, 4-epim 77.1 2.6 8.9E-05 40.3 5.3 81 242-323 27-112 (352)
437 3sju_A Keto reductase; short-c 77.0 5.8 0.0002 36.8 7.6 82 242-325 24-113 (279)
438 1ae1_A Tropinone reductase-I; 77.0 7.6 0.00026 35.8 8.4 80 242-323 21-109 (273)
439 3ruf_A WBGU; rossmann fold, UD 77.0 4 0.00014 38.9 6.6 80 242-322 25-109 (351)
440 2jah_A Clavulanic acid dehydro 76.7 7.2 0.00025 35.3 8.0 80 242-323 7-94 (247)
441 2ae2_A Protein (tropinone redu 76.4 8 0.00027 35.2 8.3 80 242-323 9-97 (260)
442 3ew7_A LMO0794 protein; Q8Y8U8 76.4 11 0.00037 32.8 8.9 69 244-323 2-71 (221)
443 1spx_A Short-chain reductase f 76.3 5.3 0.00018 36.8 7.0 81 242-323 6-96 (278)
444 1p0f_A NADP-dependent alcohol 76.2 3.4 0.00012 40.2 5.9 53 236-293 186-239 (373)
445 2a4k_A 3-oxoacyl-[acyl carrier 76.0 5.7 0.00019 36.5 7.1 77 242-323 6-90 (263)
446 4f6l_B AUSA reductase domain p 76.0 37 0.0013 34.1 13.9 78 243-322 151-240 (508)
447 2fr1_A Erythromycin synthase, 75.6 22 0.00076 35.9 12.0 86 239-326 223-319 (486)
448 1cdo_A Alcohol dehydrogenase; 75.5 3.6 0.00012 40.0 5.9 53 236-293 187-240 (374)
449 2fzw_A Alcohol dehydrogenase c 75.2 3.9 0.00013 39.7 6.0 53 236-293 185-238 (373)
450 3h2s_A Putative NADH-flavin re 75.1 4.3 0.00015 35.7 5.9 69 244-322 2-71 (224)
451 1yo6_A Putative carbonyl reduc 75.1 2.8 9.6E-05 37.6 4.7 77 242-323 3-91 (250)
452 4a2c_A Galactitol-1-phosphate 74.9 6.9 0.00024 37.3 7.7 55 234-293 153-208 (346)
453 2jhf_A Alcohol dehydrogenase E 74.7 3.9 0.00013 39.8 5.9 53 236-293 186-239 (374)
454 3sx2_A Putative 3-ketoacyl-(ac 74.5 8.4 0.00029 35.4 7.9 81 241-323 12-112 (278)
455 1nff_A Putative oxidoreductase 74.5 3.7 0.00013 37.7 5.4 78 242-324 7-92 (260)
456 1e3i_A Alcohol dehydrogenase, 74.3 3.9 0.00013 39.8 5.8 52 237-293 191-243 (376)
457 3gvc_A Oxidoreductase, probabl 74.3 8.9 0.00031 35.5 8.1 78 242-324 29-114 (277)
458 3edm_A Short chain dehydrogena 74.0 5.2 0.00018 36.6 6.3 80 241-322 7-95 (259)
459 1rjw_A ADH-HT, alcohol dehydro 73.9 8.5 0.00029 36.8 8.0 50 237-292 160-210 (339)
460 3r1i_A Short-chain type dehydr 73.9 4.3 0.00015 37.7 5.7 83 241-325 31-121 (276)
461 3uog_A Alcohol dehydrogenase; 73.8 4.9 0.00017 39.0 6.3 52 236-293 184-236 (363)
462 1piw_A Hypothetical zinc-type 73.6 4.3 0.00015 39.2 5.9 51 237-293 175-226 (360)
463 1m6e_X S-adenosyl-L-methionnin 73.3 3.4 0.00012 40.4 5.0 78 242-319 52-145 (359)
464 3v2h_A D-beta-hydroxybutyrate 73.3 9.5 0.00033 35.4 8.0 83 242-325 25-116 (281)
465 3cxt_A Dehydrogenase with diff 73.3 13 0.00044 34.7 9.0 80 242-323 34-121 (291)
466 3tos_A CALS11; methyltransfera 73.1 2.9 9.8E-05 38.9 4.1 122 242-398 70-235 (257)
467 3v2g_A 3-oxoacyl-[acyl-carrier 72.8 14 0.00049 33.9 9.1 82 241-324 30-120 (271)
468 3uko_A Alcohol dehydrogenase c 72.5 3.2 0.00011 40.5 4.6 53 236-293 188-241 (378)
469 3ek2_A Enoyl-(acyl-carrier-pro 72.1 5.8 0.0002 36.2 6.1 83 240-324 12-103 (271)
470 3d3w_A L-xylulose reductase; u 71.9 13 0.00045 33.1 8.4 76 241-322 6-85 (244)
471 3op4_A 3-oxoacyl-[acyl-carrier 71.9 7.4 0.00025 35.3 6.7 80 241-325 8-95 (248)
472 3icc_A Putative 3-oxoacyl-(acy 71.9 6.2 0.00021 35.6 6.2 123 241-382 6-148 (255)
473 3sc4_A Short chain dehydrogena 71.7 13 0.00044 34.4 8.5 122 242-382 9-152 (285)
474 4ezb_A Uncharacterized conserv 71.7 16 0.00053 34.7 9.2 105 243-396 25-135 (317)
475 2x9g_A PTR1, pteridine reducta 71.1 12 0.00042 34.5 8.3 80 242-323 23-116 (288)
476 3ak4_A NADH-dependent quinucli 70.8 4 0.00014 37.3 4.7 77 242-323 12-96 (263)
477 1i24_A Sulfolipid biosynthesis 70.7 7 0.00024 37.9 6.7 82 240-323 9-110 (404)
478 3ezl_A Acetoacetyl-COA reducta 70.4 5.7 0.00019 36.0 5.6 82 241-324 12-102 (256)
479 3m1a_A Putative dehydrogenase; 70.4 5.6 0.00019 36.7 5.6 77 242-323 5-89 (281)
480 2b4q_A Rhamnolipids biosynthes 70.3 6.5 0.00022 36.4 6.0 79 242-323 29-115 (276)
481 2ew8_A (S)-1-phenylethanol deh 70.1 7.8 0.00027 35.1 6.5 77 242-323 7-92 (249)
482 1zem_A Xylitol dehydrogenase; 70.1 12 0.00041 34.1 7.8 81 241-323 6-94 (262)
483 4e3z_A Putative oxidoreductase 70.0 16 0.00053 33.5 8.6 82 241-324 25-115 (272)
484 2q2v_A Beta-D-hydroxybutyrate 69.8 8.6 0.00029 34.9 6.7 78 242-323 4-89 (255)
485 2p4h_X Vestitone reductase; NA 69.8 5 0.00017 37.6 5.2 78 242-321 1-82 (322)
486 3dii_A Short-chain dehydrogena 69.5 7.3 0.00025 35.3 6.1 78 242-325 2-87 (247)
487 3v8b_A Putative dehydrogenase, 69.3 8.8 0.0003 35.7 6.8 82 241-324 27-116 (283)
488 3tsc_A Putative oxidoreductase 69.3 18 0.00063 33.1 9.0 82 241-324 10-112 (277)
489 3t7c_A Carveol dehydrogenase; 68.9 15 0.00052 34.2 8.4 81 241-323 27-127 (299)
490 2ehd_A Oxidoreductase, oxidore 68.9 15 0.00051 32.5 8.0 76 242-323 5-88 (234)
491 3grp_A 3-oxoacyl-(acyl carrier 68.8 9.6 0.00033 35.0 6.8 79 241-324 26-112 (266)
492 4dry_A 3-oxoacyl-[acyl-carrier 68.3 16 0.00056 33.7 8.4 82 241-323 32-121 (281)
493 3ip1_A Alcohol dehydrogenase, 68.3 7.6 0.00026 38.2 6.4 51 238-293 210-261 (404)
494 3uve_A Carveol dehydrogenase ( 68.1 14 0.00047 34.1 7.8 82 241-324 10-115 (286)
495 4fgs_A Probable dehydrogenase 68.0 16 0.00055 34.0 8.2 78 241-323 28-113 (273)
496 3ojo_A CAP5O; rossmann fold, c 67.8 55 0.0019 32.5 12.6 120 242-398 11-145 (431)
497 2z5l_A Tylkr1, tylactone synth 67.5 15 0.00052 37.5 8.6 87 239-327 256-349 (511)
498 1gy8_A UDP-galactose 4-epimera 67.1 12 0.00039 36.3 7.4 81 242-323 2-103 (397)
499 3b5i_A S-adenosyl-L-methionine 66.5 13 0.00044 36.5 7.4 21 242-262 53-73 (374)
500 3nbm_A PTS system, lactose-spe 66.3 11 0.00039 29.9 5.8 58 241-322 5-62 (108)
No 1
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.4e-60 Score=490.34 Aligned_cols=385 Identities=23% Similarity=0.243 Sum_probs=316.1
Q ss_pred HHHHHHHHHHHHHHHccChhhHH-HHhhhhhhcCCCc-cCHHHHHHHHHHHHhcHHHHHHHhhhhhccccccc----chH
Q 013515 32 YFARREAAKVLRLVLRGDARRRA-VGSIKSLVYSPSV-KNKKATYALVCQTLKHLSIIKQVLDSASILNSKWK----RQE 105 (441)
Q Consensus 32 ~~~R~~A~~vL~~v~~~~~~~~~-~~~~~~~~~~~~~-~dr~~~~~Lv~GvlR~~~~Ld~il~~~~~l~~~~~----~~~ 105 (441)
+++|+.|+++|++++.++.+++. +..+... ...+. +||+++++|||||+|++..||++|.+ +++++.+ ..+
T Consensus 11 ~~~R~~A~~~L~~v~~~~~~~~~~l~~~~~~-~~l~~~~dr~~~~~lv~gvlr~~~~ld~~i~~--~~~~~~~~~~~~~~ 87 (450)
T 2yxl_A 11 PPKGIRAIIEAIRLGEIIKPSQYAKREAFKK-HDVEEAWLNRVLTMIFYDIMKKQGLIDKVIKE--IVGVTPLILDPWLR 87 (450)
T ss_dssp CHHHHHHHHHHHHHTTTSSSTHHHHHHHHHH-TTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHSSCGGGSCHHHH
T ss_pred chHHHHHHHHHHHHHhcCCcHHHHHHHHHHh-ccCCcHHHHHHHHHHHHHHHHhHHHHHHHHHH--hccCChhhcCHHHH
Confidence 46999999999999887666653 3332211 23456 79999999999999999999999997 4555433 247
Q ss_pred HHHHHHHHHHHhcCCCCchHHHH----HHHHHhhHH-------HH------------------------HHHHHHHHHcc
Q 013515 106 ELVYILTYDILFGQEISLVGDAE----KFLMLHKGA-------IQ------------------------LALAQLLVRNK 150 (441)
Q Consensus 106 ~lL~l~~yql~f~~~ip~~~~i~----~~v~~~k~~-------~~------------------------~~l~~~~~~~~ 150 (441)
.+||+++||++| ++|.+++++ ++|+.+|.. +. ++++.|+.+++
T Consensus 88 ~iLrla~yell~--~ip~~~ain~~~~eaVelak~~~~~~~~~fvNgvL~~~~r~~~~~~~~~~~~~~~~~~P~w~~~~~ 165 (450)
T 2yxl_A 88 AALRVAVDIALF--HDPSSQTIKNLRWKASDFISSRTHPYVGMYFWDLLDKIFEYKPNPKNELEELEWKYLAPSWLIERV 165 (450)
T ss_dssp HHHHHHHHHHHH--SCBCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCCCCCCSHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHhc--CCCchHHhccccHHHHHHHHhccccccccchHHHHHHHhhccccccchhhhhhhHhcCcHHHHHHH
Confidence 899999999999 599999999 999887641 11 12233433322
Q ss_pred c----ccHHHHHHhhCCCC-CCCCceEEecCCCCCHHHHHHHHcc-cCcccccCCCCCeEEeCCCCCCCCChhhhcCccc
Q 013515 151 V----KSIEDLMALYQTPD-VPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 224 (441)
Q Consensus 151 ~----~~~e~~~~~~~~~~-~~~p~~~RvN~~k~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~ 224 (441)
. ...+++++ +++ .++|+++|||+.+++++++.+.|++ |+.+++++++|+++.++....+..++.|.+|.++
T Consensus 166 ~~~~g~~~~~~~~---a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 242 (450)
T 2yxl_A 166 KGILGDETEDFFR---SVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKII 242 (450)
T ss_dssp HHHHGGGHHHHHH---HHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCCEEECSSCTTEEEEESCCCTTSCHHHHTTSEE
T ss_pred HHHhhHHHHHHHH---hcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCccceecCccCceEEeCCCCCcccCchhhCceEE
Confidence 1 22334443 445 6889999999999999999999976 7888889999999999655678999999999999
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
+||.+|++++.++++++|++|||+|||||++|++++..+++.++|+|+|+++.+++.++++++++|+.++.++++|+..+
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKA 322 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhc
Confidence 99999999999999999999999999999999999999876689999999999999999999999999999999999887
Q ss_pred CCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 305 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+...+ .+.||+|++||||||+|+++++||++|. ++++++..++.+|.++|.+++++++ ||.|||+|||
T Consensus 323 ~~~~~-~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~----------~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 323 PEIIG-EEVADKVLLDAPCTSSGTIGKNPELRWR----------LREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp SSSSC-SSCEEEEEEECCCCCGGGTTTSTTHHHH----------CCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred chhhc-cCCCCEEEEcCCCCCCeeeccChhhhhh----------CCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 63221 1579999999999999999999998763 2567889999999999999999988 7999999999
Q ss_pred CCChhcHHHHHHHhchhcCCCeEEecCCCCCCCccccccccceeeeecccCCCCCCCC
Q 013515 384 IHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 384 ~~~~ENe~vV~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~g~~~ 441 (441)
++++|||++|.+||+ .+++|++++..+.| .. ......+++.|+.+.+.|+|+
T Consensus 392 ~~~~ene~~v~~~l~--~~~~~~~~~~~~~~--~~--~~~~~~~~~~P~~~~~dGff~ 443 (450)
T 2yxl_A 392 IFKEENEKNIRWFLN--VHPEFKLVPLKSPY--DP--GFLEGTMRAWPHRHSTIGFFY 443 (450)
T ss_dssp CCGGGTHHHHHHHHH--HCSSCEECCCCSSS--EE--CSSTTCEEECHHHHSSCCEEE
T ss_pred CChhhHHHHHHHHHH--hCCCCEEeeccccc--cc--ccCCCeEEECCCCCCCCceEE
Confidence 999999999999995 46789988766556 11 112234889999999999984
No 2
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.9e-57 Score=467.33 Aligned_cols=377 Identities=21% Similarity=0.254 Sum_probs=307.7
Q ss_pred HHHHHHHHHHHHHHHccCh-hhHHHHhhhhhhcCCCccCHHHHHHHHHHHHhcHHHHHHHhhhhhccccccc----chHH
Q 013515 32 YFARREAAKVLRLVLRGDA-RRRAVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWK----RQEE 106 (441)
Q Consensus 32 ~~~R~~A~~vL~~v~~~~~-~~~~~~~~~~~~~~~~~~dr~~~~~Lv~GvlR~~~~Ld~il~~~~~l~~~~~----~~~~ 106 (441)
+.+|+.|+++|++++.++. ..+++... ....+.+|++++++|||||+|++..||++|.+ +++++.. ..+.
T Consensus 5 ~~aR~~A~~~L~~~~~~~~~~~~~l~~~---~~~~~~~dr~~~~~lv~gvlr~~~~ld~~i~~--~~~~~~~~~~~~~~~ 79 (429)
T 1sqg_A 5 RNLRSMAAQAVEQVVEQGQSLSNILPPL---QQKVSDKDKALLQELCFGVLRTLSQLDWLINK--LMARPMTGKQRTVHY 79 (429)
T ss_dssp CCHHHHHHHHHHHHHHHCCCHHHHHHHH---HTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCSSCCCGGGHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCHHHHHHHH---HhhCCHHHHHHHHHHHHHHHHhHHHHHHHHHH--hcCCChhhcCHHHHH
Confidence 4589999999999977543 34343321 12345689999999999999999999999997 5555432 2488
Q ss_pred HHHHHHHHHHhcCCCCchHHHHHHHHHhhH-------HHHHH------------------------HHHHHHHccc----
Q 013515 107 LVYILTYDILFGQEISLVGDAEKFLMLHKG-------AIQLA------------------------LAQLLVRNKV---- 151 (441)
Q Consensus 107 lL~l~~yql~f~~~ip~~~~i~~~v~~~k~-------~~~~~------------------------l~~~~~~~~~---- 151 (441)
+||+++||++|+ ++|.+++++++|+.+|. .+.++ ++.|+.+++.
T Consensus 80 iLrl~~yel~~~-~~p~~~~ineaVelak~~~~~~~~~fvN~vL~~~~r~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~g 158 (429)
T 1sqg_A 80 LIMVGLYQLLYT-RIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLHPSWLLKRLQKAYP 158 (429)
T ss_dssp HHHHHHHHHHHC-CSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHHHTTSGGGGCSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhC-CCCchHhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhcccccchhhhhhhcCcHHHHHHHHHHhh
Confidence 999999999999 59999999999987652 11111 2233332221
Q ss_pred ccHHHHHHhhCCCCCCCCceEEecCCCCCHHHHHHHHcc-cCcccccCCCCCeEEeCCCCCCCCChhhhcCcccccchhh
Q 013515 152 KSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 230 (441)
Q Consensus 152 ~~~e~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~Qd~ss 230 (441)
...+++++ +.+.++|+++|||+.+.+++++.+.|++ |+..++++++|+++.++....+..++.|.+|.+++||.+|
T Consensus 159 ~~~~~~~~---~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s 235 (429)
T 1sqg_A 159 EQWQSIVE---ANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASA 235 (429)
T ss_dssp TTHHHHHH---HHTSCCCEEEEECTTTCCHHHHHHHHHHTTCCEECCTTCTTEEEESSCCCGGGSTTGGGTSEEECCHHH
T ss_pred HHHHHHHH---hCCCCCCeEEEEcCCCCCHHHHHHHHHhCCCceeecCCCCCEEEECCCCCcccChHHhCCCeEeeCHHH
Confidence 22333443 3456889999999999999999999876 7888888999999999877788999999999999999999
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 310 (441)
++++.++++++|++|||+|||||++|.++++.+++ ++|+|+|+++.+++.++++++++|+ ++.++++|+..++...+
T Consensus 236 ~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~- 312 (429)
T 1sqg_A 236 QGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCG- 312 (429)
T ss_dssp HTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHT-
T ss_pred HHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcc-
Confidence 99999999999999999999999999999999755 8999999999999999999999998 47899999987652111
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhc
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVEN 389 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~EN 389 (441)
.++||+|++||||||+|+++++||++|. ++++++..++.+|.++|.+++++++ ||.|||||||++++||
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~----------~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~en 382 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWL----------RRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHH----------CCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGT
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhc----------CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhH
Confidence 1579999999999999999999998763 3578899999999999999999887 7999999999999999
Q ss_pred HHHHHHHhchhcCCCeEEecCCCCCCCccccccccceeeeecccCCCCCCCC
Q 013515 390 EDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 390 e~vV~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~g~~~ 441 (441)
|++|.++|+ .+++|++++ + |. . ....+++.|+.+.+.|+|+
T Consensus 383 e~~v~~~l~--~~~~~~~~~--~-~~----~--~~~~~~~~P~~~~~dGff~ 423 (429)
T 1sqg_A 383 SLQIKAFLQ--RTADAELCE--T-GT----P--EQPGKQNLPGAEEGDGFFY 423 (429)
T ss_dssp HHHHHHHHH--HCTTCEECS--S-BC----S--SSBSEEECCCTTSCCSEEE
T ss_pred HHHHHHHHH--hCCCCEEeC--C-CC----C--CCCeEEECCCCCCCCceEE
Confidence 999999995 467898866 2 21 1 1223788999999999984
No 3
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=1.7e-52 Score=411.40 Aligned_cols=267 Identities=42% Similarity=0.667 Sum_probs=218.0
Q ss_pred CCCCCceEEecCCCCCHHHHHHHHcc-cCcccc------------------cCCCCCeEEeCCCCCCCCChhhhcCcccc
Q 013515 165 DVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQK------------------DDLVPDLLILPPGCDLHVHPLIVNGCVFL 225 (441)
Q Consensus 165 ~~~~p~~~RvN~~k~~~~~~~~~L~~-~~~~~~------------------~~~~~~~~~~~~~~~l~~~~~~~~g~~~~ 225 (441)
..++|+|+|||++|++++++++.|++ ++.+++ ++++|+++.++++..+..+++|++|.+++
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~ 86 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLIL 86 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTCCCTTSHHHHTTSEEE
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCCCcccChHHHCCeEEE
Confidence 34789999999999999999999976 665444 35678888888667899999999999999
Q ss_pred cchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC
Q 013515 226 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 305 (441)
Q Consensus 226 Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~ 305 (441)
||.+|++++.++++++|++|||+|||||+||+++++++++.++|+|+|+++.+++.+++|++++|+.||+++++|+.++.
T Consensus 87 Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~ 166 (309)
T 2b9e_A 87 QDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVS 166 (309)
T ss_dssp CCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSC
T ss_pred ECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcC
Confidence 99999999999999999999999999999999999998878999999999999999999999999999999999998876
Q ss_pred CCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCC
Q 013515 306 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 385 (441)
Q Consensus 306 ~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTCS~~ 385 (441)
.....+.+||+||+||||||+|+++++||++|... ++++++..++.+|++||.+|+++++||+|||||||++
T Consensus 167 ~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~--------~~~~~~~~l~~~Q~~iL~~a~~~l~gG~lvYsTCs~~ 238 (309)
T 2b9e_A 167 PSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGT--------PSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLC 238 (309)
T ss_dssp TTCGGGTTEEEEEECCCCCC--------------------------CCHHHHHHHHHHHHHHHTTCTTCCEEEEEESCCC
T ss_pred ccccccCCCCEEEEcCCcCCCCCCccCCChhhhcc--------CCHHHHHHHHHHHHHHHHHHHhccCCCEEEEECCCCC
Confidence 54322357999999999999999999999866431 3567899999999999999999888999999999999
Q ss_pred ChhcHHHHHHHhchhcCCC-eEEecCCCCCCCccccc--cccceeeeecccCCCCCCCC
Q 013515 386 QVENEDVIKSVLPIAMSFG-FQLATPFPNGTAEASQF--LKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 386 ~~ENe~vV~~~l~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~f~p~~~~~~g~~~ 441 (441)
++|||+||.+||+ .+++ |++++..+.|...+... ....++++.|+.+.+.|+|+
T Consensus 239 ~~Ene~~v~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~ 295 (309)
T 2b9e_A 239 QEENEDVVRDALQ--QNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFV 295 (309)
T ss_dssp GGGTHHHHHHHHT--TSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHHHSSCSEEE
T ss_pred hHHhHHHHHHHHH--hCCCcEEEeccccccccccccccCCCCCeEEECCCCCCCCCeEE
Confidence 9999999999995 4667 99988888887554321 12234899999999999994
No 4
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.2e-49 Score=409.31 Aligned_cols=267 Identities=27% Similarity=0.351 Sum_probs=231.3
Q ss_pred cHHHHHHhhCCCCCC-CCceEEecCCCCCHHHHHHHHcccCcccccCCCCCeEEeCCCCCCCCChhhhcCcccccchhhH
Q 013515 153 SIEDLMALYQTPDVP-KPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 231 (441)
Q Consensus 153 ~~e~~~~~~~~~~~~-~p~~~RvN~~k~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~Qd~ss~ 231 (441)
..+++++.+ +.+ +|+++|||++|++++++.+.| ++.+++.+|+|+++.+.....+..+++|.+|.+++||.+|+
T Consensus 17 e~~~~l~a~---~~~~~~~~lRvN~lk~~~~~~~~~l--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~G~~~vQd~ss~ 91 (464)
T 3m6w_A 17 EFPAFLKAL---TEGKRTYGLRVNTLKLPPEAFQRIS--PWPLRPIPWCQEGFYYPEEARPGPHPFFYAGLYYIQEPSAQ 91 (464)
T ss_dssp GHHHHHHHH---HTSCCCCEEEECTTTCCHHHHHHHC--SSCCEEETTEEEEEECCTTCCCSSSHHHHTTSEEECCTTTH
T ss_pred HHHHHHHHc---CCCCCCeEEEEcCCCCCHHHHHHHc--CCCceecCCCCceEEECCCCCcccChHHhCCeEEEECHHHH
Confidence 356666544 557 899999999999999998887 57778899999999998666788999999999999999999
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
+++.++++++|++|||+|||||++|+++++++++.++|+|+|+++.+++.+++|++++|+. |.++++|+..+.....
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~-- 168 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFG-- 168 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHC--
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhcc--
Confidence 9999999999999999999999999999999987799999999999999999999999998 9999999887653111
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcH
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENE 390 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe 390 (441)
+.||+|++||||||+|+++++||+.|. ++++++..++.+|.++|.+|+++++ ||+|||||||++++|||
T Consensus 169 ~~FD~Il~D~PcSg~G~~rr~pd~~~~----------~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne 238 (464)
T 3m6w_A 169 TYFHRVLLDAPCSGEGMFRKDREAARH----------WGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENE 238 (464)
T ss_dssp SCEEEEEEECCCCCGGGTTTCTTSGGG----------CCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTH
T ss_pred ccCCEEEECCCcCCccccccChHHhhh----------cCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCH
Confidence 679999999999999999999998653 3578999999999999999999988 79999999999999999
Q ss_pred HHHHHHhchhcCCCeEEecCCC---------CCCCccccccccceeeeecccCCCCCCCC
Q 013515 391 DVIKSVLPIAMSFGFQLATPFP---------NGTAEASQFLKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 391 ~vV~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~f~p~~~~~~g~~~ 441 (441)
++|.+||+ .+++|++++..+ .|........ ..+++.|+.+.+.|+|+
T Consensus 239 ~vv~~~l~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~P~~~~~dGfF~ 294 (464)
T 3m6w_A 239 GVVAHFLK--AHPEFRLEDARLHPLFAPGVPEWGEGNPELL--KTARLWPHRLEGEGHFL 294 (464)
T ss_dssp HHHHHHHH--HCTTEEEECCCCSTTSEECCGGGTTTCGGGG--GSEEECTTTSSSSCEEE
T ss_pred HHHHHHHH--HCCCcEEEecccccccccCcccccccccccC--CeEEECCCCCCceeEEE
Confidence 99999996 367898876432 2433322222 24899999999999995
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=5.7e-48 Score=381.16 Aligned_cols=283 Identities=28% Similarity=0.380 Sum_probs=228.9
Q ss_pred HHHHHHHHHccc----ccHHHHHHhhCCCCCCCCceEEecCCCCCHHHHHHHHcc-cCcccccCCCCCeEEeCCC-CCCC
Q 013515 140 LALAQLLVRNKV----KSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPG-CDLH 213 (441)
Q Consensus 140 ~~l~~~~~~~~~----~~~e~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~-~~l~ 213 (441)
++++.|+.+++. ...++++ ++++.++|+++|||++|.+++++.+.|++ ++.+++.+|+|+++.+..+ ..+.
T Consensus 14 ~~~P~w~~~~~~~~~g~~~~~~~---~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (315)
T 1ixk_A 14 LGYSKLFADRYFQLWGERAIRIA---EAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTREPFSIT 90 (315)
T ss_dssp TTCCHHHHHHHHHHHTTHHHHHH---HHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEETTEEEEEEEEECSSCGG
T ss_pred hCCcHHHHHHHHHHccHHHHHHH---HHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeECCCCCceEEEeCCCCCcc
Confidence 344555544332 2344444 45567899999999999999999999977 7888888999999888533 4588
Q ss_pred CChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 214 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 214 ~~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
.++.|.+|++++||.+|++++.++++++|++|||+|||+|++|.++++.+++.++|+|+|+++.+++.++++++++|+.+
T Consensus 91 ~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~ 170 (315)
T 1ixk_A 91 STPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLN 170 (315)
T ss_dssp GSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS
T ss_pred cChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCe
Confidence 99999999999999999999999999999999999999999999999998777899999999999999999999999989
Q ss_pred EEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 013515 294 IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 373 (441)
Q Consensus 294 v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~ 373 (441)
++++++|+..++... ++||+|++||||||+|+++++||++|. ++.+++..++..|.++|.+++++++
T Consensus 171 v~~~~~D~~~~~~~~---~~fD~Il~d~Pcsg~g~~~~~p~~~~~----------~~~~~~~~~~~~q~~~L~~~~~~Lk 237 (315)
T 1ixk_A 171 VILFHSSSLHIGELN---VEFDKILLDAPCTGSGTIHKNPERKWN----------RTMDDIKFCQGLQMRLLEKGLEVLK 237 (315)
T ss_dssp EEEESSCGGGGGGGC---CCEEEEEEECCTTSTTTCC------------------CCHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred EEEEECChhhccccc---ccCCEEEEeCCCCCcccccCChhHhhc----------CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998876422 579999999999999999999998653 4689999999999999999999887
Q ss_pred -CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEecCC------CCCCCccccccccceeeeecccCCCCCCCC
Q 013515 374 -VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF------PNGTAEASQFLKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 374 -~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~f~p~~~~~~g~~~ 441 (441)
||.|||||||++++|||++|.++|+. .+|++++.. +.|...........++++.|+.+.+.|+|+
T Consensus 238 pGG~lv~stcs~~~~Ene~~v~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~ 309 (315)
T 1ixk_A 238 PGGILVYSTCSLEPEENEFVIQWALDN---FDVELLPLKYGEPALTNPFGIELSEEIKNARRLYPDVHETSGFFI 309 (315)
T ss_dssp EEEEEEEEESCCCGGGTHHHHHHHHHH---SSEEEECCCSSEECCSSGGGCCCCGGGGGSEEECTTTSSSCSEEE
T ss_pred CCCEEEEEeCCCChHHhHHHHHHHHhc---CCCEEecCCccccCcccccccccccccCCEEEECCCCCCcccEEE
Confidence 79999999999999999999999963 468876532 111111001101234899999999999984
No 6
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=9.6e-49 Score=402.11 Aligned_cols=260 Identities=24% Similarity=0.274 Sum_probs=220.2
Q ss_pred HHHHHHhhCCCCCCCC-ceEEecCCCCCHHHHHHHHcccCccc---ccCCCCCeEEeCCCCCCCCChhhhcCcccccchh
Q 013515 154 IEDLMALYQTPDVPKP-RYVRVNTLKMDVDSAVLELGKQFVVQ---KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 229 (441)
Q Consensus 154 ~e~~~~~~~~~~~~~p-~~~RvN~~k~~~~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~Qd~s 229 (441)
.+++++.+ +.++| +++|||++|+ +++.+.+ ++.++ +.+|+|+++. . ..+..+++|.+|.+++||.+
T Consensus 24 ~~~~~~a~---~~~~~~~~lRvN~lk~--~~~~~~~--~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~G~~~vQd~s 93 (456)
T 3m4x_A 24 ASDFFSAL---EQGSVKKGFRWNPLKP--AGLDMVQ--TYHSEELQPAPYSNEGFL-G--TVNGKSFLHQAGYEYSQEPS 93 (456)
T ss_dssp HHHHHHHH---HHCCCCCEEECCTTST--THHHHHH--HHTCSSCCBCTTCTTEEE-S--CCCTTSHHHHTTSCEECCTT
T ss_pred HHHHHHHc---CCCCCCcEEEEcCccH--HHHHHhc--CCcccccCCCCCCcceEE-c--CCCCCChHHhCCcEEEECHH
Confidence 55666543 55788 9999999998 6666554 45555 7899999988 2 34688999999999999999
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 309 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~ 309 (441)
|++++.++++++|++|||+|||||++|+++++++++.++|+|+|+++.+++.+++|++++|+.||.++++|+..+....+
T Consensus 94 s~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~ 173 (456)
T 3m4x_A 94 AMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFS 173 (456)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcc
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999987653211
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChh
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVE 388 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~E 388 (441)
+.||+||+||||||+|+++++||++|. ++++++..++.+|+++|.+|+++++ ||+|||||||++++|
T Consensus 174 --~~FD~Il~DaPCSg~G~~rr~p~~~~~----------~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eE 241 (456)
T 3m4x_A 174 --GFFDRIVVDAPCSGEGMFRKDPNAIKE----------WTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEE 241 (456)
T ss_dssp --TCEEEEEEECCCCCGGGTTTCHHHHHH----------CCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGG
T ss_pred --ccCCEEEECCCCCCccccccCHHHhhh----------cCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccccc
Confidence 679999999999999999999998653 3578899999999999999999988 799999999999999
Q ss_pred cHHHHHHHhchhcCCCeEEecCCC---------CCCCccccccccceeeeecccCCCCCCCC
Q 013515 389 NEDVIKSVLPIAMSFGFQLATPFP---------NGTAEASQFLKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 389 Ne~vV~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~f~p~~~~~~g~~~ 441 (441)
||+||.+||+. ++ |++++..+ .|.... .. ...+++.|+.+.+.|+|+
T Consensus 242 ne~vv~~~l~~--~~-~~l~~~~~~~~~~~~~~~~~~~~-~~--~~~~r~~P~~~~~dGFF~ 297 (456)
T 3m4x_A 242 NEEIISWLVEN--YP-VTIEEIPLTQSVSSGRSEWGSVA-GL--EKTIRIWPHKDQGEGHFV 297 (456)
T ss_dssp THHHHHHHHHH--SS-EEEECCCCSSCCEECCGGGSSST-TG--GGSEEECTTTSSSSCEEE
T ss_pred CHHHHHHHHHh--CC-CEEEecccccccccccccccccc-cc--CCeEEECCCCCCCcCeEE
Confidence 99999999963 44 88876432 233221 11 224899999999999995
No 7
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.8e-47 Score=394.97 Aligned_cols=270 Identities=25% Similarity=0.293 Sum_probs=226.8
Q ss_pred HHHHHhhCCCCCCCCceEEecCCCCCHHHHHHHHcc-cCcccccCCCCCeEEeCCCC----CCCCChhhhcCcccccchh
Q 013515 155 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGC----DLHVHPLIVNGCVFLQGKA 229 (441)
Q Consensus 155 e~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~g~~~~Qd~s 229 (441)
+++++. .+.++|+++|||++|++++++.+.|++ ++.+++.+|+|+++.+.... .+..+++|.+|.+++||.+
T Consensus 27 ~~~~~a---~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~ 103 (479)
T 2frx_A 27 DDFLAA---CQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEAS 103 (479)
T ss_dssp HHHHHH---HTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEETTEEEEEC---------CGGGSHHHHTTSEEECCHH
T ss_pred HHHHHh---cCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeecCCCCceEEEecCcccccCcccChHHhCcEEEEECHH
Confidence 555554 456889999999999999999999976 78888899999998875322 5788999999999999999
Q ss_pred hHHHHHHhCCC--CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 230 SSMVAAALAPK--PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 230 s~l~~~~l~~~--~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
|++++.+|++. +|++|||+|||||++|+++++++++.+.|+|+|+++.|++.+++|++++|+.||.++++|+..++..
T Consensus 104 s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~ 183 (479)
T 2frx_A 104 SMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA 183 (479)
T ss_dssp HHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH
T ss_pred HHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh
Confidence 99999999998 9999999999999999999999877799999999999999999999999999999999999887531
Q ss_pred CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC
Q 013515 308 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ 386 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~ 386 (441)
.. +.||+|++||||||+|+++++||+.|. |+++++..++.+|.++|.+|+++++ ||+|||||||+++
T Consensus 184 ~~--~~fD~Il~D~PcSg~G~~~~~pd~~~~----------~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 184 VP--EMFDAILLDAPCSGEGVVRKDPDALKN----------WSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp ST--TCEEEEEEECCCCCGGGGGTCTTSSSS----------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred cc--ccCCEEEECCCcCCcccccCCHHHHhh----------cCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 11 579999999999999999999998552 4789999999999999999999887 7999999999999
Q ss_pred hhcHHHHHHHhchhcCCCe-EEecCCCCCCCccccccccceeeeecccCCCCCCCC
Q 013515 387 VENEDVIKSVLPIAMSFGF-QLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 441 (441)
Q Consensus 387 ~ENe~vV~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~g~~~ 441 (441)
+|||+||.++|+. ++++ ++++..+.|+...........+++.|+.+.+.|+|+
T Consensus 252 ~Ene~vv~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~~~~dGfF~ 305 (479)
T 2frx_A 252 EENEAVCLWLKET--YPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFV 305 (479)
T ss_dssp TTTHHHHHHHHHH--STTTEEECCCTTSSTTGGGGBCTTSCEEECTTTTTSCCEEE
T ss_pred ccCHHHHHHHHHH--CCCceecccccccccccccccccCCeEEECCCCCCcCccEE
Confidence 9999999999963 5565 444433334322111112233899999999999984
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=2.4e-44 Score=358.58 Aligned_cols=261 Identities=20% Similarity=0.200 Sum_probs=193.8
Q ss_pred CCCCceEEecCCCCCHHHHHHHHcc-cCc-----------c----------cccC-CCCCe--EEeCCCCCCCCChhhhc
Q 013515 166 VPKPRYVRVNTLKMDVDSAVLELGK-QFV-----------V----------QKDD-LVPDL--LILPPGCDLHVHPLIVN 220 (441)
Q Consensus 166 ~~~p~~~RvN~~k~~~~~~~~~L~~-~~~-----------~----------~~~~-~~~~~--~~~~~~~~l~~~~~~~~ 220 (441)
.+++..+|+|++. +.+++.+.|+. +.. . .+.. .++.. ..+.+.+++...|.|++
T Consensus 44 ~~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~g~~~~~p~~~~ 122 (359)
T 4fzv_A 44 SEQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDISRFPPARP 122 (359)
T ss_dssp SCCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHHSCSSCCEEECCTTCCCCCCCCCB
T ss_pred CcchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCcccccCCccceEEecCCCChhcCCCccc
Confidence 4667889999986 56777777764 210 0 0000 01111 12233456778888888
Q ss_pred Cc-----ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC----
Q 013515 221 GC-----VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA---- 291 (441)
Q Consensus 221 g~-----~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~---- 291 (441)
|. |++||.+||+++.+|+++||++|||+||||||||++|++++. .+.|+|+|+++.|++.+++|++++|+
T Consensus 123 g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~ 201 (359)
T 4fzv_A 123 GSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIR 201 (359)
T ss_dssp CTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTT
T ss_pred CceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhc
Confidence 76 556669999999999999999999999999999999999764 48999999999999999999999986
Q ss_pred --CcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCC--cccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 013515 292 --ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS--GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH 367 (441)
Q Consensus 292 --~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~--G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~ 367 (441)
.++.+.+.|+..+.... .+.||+||+||||||+ |+++++||+.|. ++++++..++.+|++||.+
T Consensus 202 ~~~~v~v~~~D~~~~~~~~--~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~----------~~~~~~~~l~~lQ~~iL~~ 269 (359)
T 4fzv_A 202 DGNQVRVTSWDGRKWGELE--GDTYDRVLVDVPCTTDRHSLHEEENNIFKR----------SRKKERQILPVLQVQLLAA 269 (359)
T ss_dssp TSSSEEEECCCGGGHHHHS--TTCEEEEEEECCCCCHHHHTTCCTTCTTSG----------GGHHHHHTHHHHHHHHHHH
T ss_pred cCCceEEEeCchhhcchhc--cccCCEEEECCccCCCCCcccccChhhhhh----------CCHHHHHHHHHHHHHHHHH
Confidence 37899999998876432 2679999999999997 777888887553 4789999999999999999
Q ss_pred HhCCCC-CcEEEEEcCCCCChhcHHHHHHHhchhcC-CCeEEe-cCCCCCCC-----ccccccccceeeeecccCCCCCC
Q 013515 368 ALSFPG-VERVVYSTCSIHQVENEDVIKSVLPIAMS-FGFQLA-TPFPNGTA-----EASQFLKALSIYFEPIQWKTKKA 439 (441)
Q Consensus 368 a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~~~-~~~~~~-~~~~~~~~-----~~~~~~~~~~~~f~p~~~~~~g~ 439 (441)
|+++++ ||+|||||||++++|||+||++||+.... ..+++. ...+.|.. ..........+++.|+.+.+.|.
T Consensus 270 a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~r~~P~~~~~~gG 349 (359)
T 4fzv_A 270 GLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGP 349 (359)
T ss_dssp HHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHTTTCEECTTCSSSEEEECBTTBCCCC
T ss_pred HHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCcccccccccccccccccccccccCccccceEEECCCCCCCCCC
Confidence 999988 79999999999999999999999964211 111111 11111111 00111112347899999888774
Q ss_pred C
Q 013515 440 F 440 (441)
Q Consensus 440 ~ 440 (441)
|
T Consensus 350 F 350 (359)
T 4fzv_A 350 M 350 (359)
T ss_dssp E
T ss_pred E
Confidence 3
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=6.7e-43 Score=338.30 Aligned_cols=254 Identities=28% Similarity=0.333 Sum_probs=203.2
Q ss_pred CCCCCceEEecCCCCCHHHHHHHHcc-cCcccccCCCCCeEEe-CCCCCCCCChhhhcCcccccchhhHHHHHHhCCCCC
Q 013515 165 DVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLIL-PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG 242 (441)
Q Consensus 165 ~~~~p~~~RvN~~k~~~~~~~~~L~~-~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~g~~~~Qd~ss~l~~~~l~~~~g 242 (441)
..++|+|+|||+++.+++++.+.|++ ++.+++ +|+|+++.+ .....+..++.|..|++++||.+|++++.++++++|
T Consensus 6 ~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g 84 (274)
T 3ajd_A 6 KGEKMQFIRVNTLKINPEVLKKRLENKGVVLEK-TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPRED 84 (274)
T ss_dssp ---CCEEEEECTTTCCHHHHHHHHHTTTCEEEE-CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHHCCCTT
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecC-CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHhCCCCc
Confidence 35789999999999999999999977 677777 899999988 333567889999999999999999999999999999
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCCccEEEEcC
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSEVRAILLDP 321 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~Il~Dp 321 (441)
++|||+|||+|++|.++++++.+.++|+|+|+++.+++.++++++++|+.++.++++|+..+.... ...++||+|++||
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~ 164 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDA 164 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcC
Confidence 999999999999999999988777899999999999999999999999999999999998765310 0015799999999
Q ss_pred CCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHhchh
Q 013515 322 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVLPIA 400 (441)
Q Consensus 322 PCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~ 400 (441)
||||+|+++++|. |+.+++..+...|.++|.+++++++ ||.|||+|||++++|||++|.++|+
T Consensus 165 Pcs~~g~~~~~p~--------------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~-- 228 (274)
T 3ajd_A 165 PCSGNIIKDKNRN--------------VSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQ-- 228 (274)
T ss_dssp CCC--------------------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHH--
T ss_pred CCCCCcccccCCC--------------CCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHH--
Confidence 9999999988751 3678888999999999999999887 7999999999999999999999995
Q ss_pred cCCCeEEecCC-CCCCC-ccccccccceeeeecccCC
Q 013515 401 MSFGFQLATPF-PNGTA-EASQFLKALSIYFEPIQWK 435 (441)
Q Consensus 401 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~f~p~~~~ 435 (441)
.+++|++++.. +.+.. ..+......++++.|+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 265 (274)
T 3ajd_A 229 KRNDVELIIIKANEFKGINIKEGYIKGTLRVFPPNEP 265 (274)
T ss_dssp HCSSEEEECCCSTTCTTSCEEECSSTTCEEECTTSCC
T ss_pred hCCCcEEecCccccccCcccccccCCCeEEECCCCCC
Confidence 46789887643 22211 1111112334889999864
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.75 E-value=5.3e-18 Score=171.38 Aligned_cols=161 Identities=20% Similarity=0.220 Sum_probs=129.3
Q ss_pred ChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 013515 215 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 294 (441)
Q Consensus 215 ~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v 294 (441)
...+++|.|..|..+..++..++ ++|++|||+|||+|++|++++.. + ..|+++|+|+.+++.+++|++.+|+.+
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~- 263 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRV- 263 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC-
T ss_pred hhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC-
Confidence 46789999999999988887665 46999999999999999999885 3 349999999999999999999999863
Q ss_pred EEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-
Q 013515 295 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG- 373 (441)
Q Consensus 295 ~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~- 373 (441)
.+.++|+.++..... +.||+|++||||... +.+++......+.+++..++++++
T Consensus 264 ~~~~~D~~~~l~~~~--~~fD~Ii~dpP~f~~-----------------------~~~~~~~~~~~~~~ll~~a~~~Lkp 318 (393)
T 4dmg_A 264 DIRHGEALPTLRGLE--GPFHHVLLDPPTLVK-----------------------RPEELPAMKRHLVDLVREALRLLAE 318 (393)
T ss_dssp EEEESCHHHHHHTCC--CCEEEEEECCCCCCS-----------------------SGGGHHHHHHHHHHHHHHHHHTEEE
T ss_pred cEEEccHHHHHHHhc--CCCCEEEECCCcCCC-----------------------CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 466899887643221 349999999998432 233566778889999999999988
Q ss_pred CcEEEEEcCCCCChhcH--HHHHHHhchhcCCCeEE
Q 013515 374 VERVVYSTCSIHQVENE--DVIKSVLPIAMSFGFQL 407 (441)
Q Consensus 374 ~G~lvYsTCS~~~~ENe--~vV~~~l~~~~~~~~~~ 407 (441)
||.|+|+|||.+..+++ ++|...+... ...+++
T Consensus 319 GG~Lv~~s~s~~~~~~~f~~~v~~a~~~~-g~~~~i 353 (393)
T 4dmg_A 319 EGFLWLSSCSYHLRLEDLLEVARRAAADL-GRRLRV 353 (393)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHH-TCCEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHh-CCeEEE
Confidence 79999999999999887 7777776433 334444
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.71 E-value=5.6e-17 Score=152.15 Aligned_cols=144 Identities=19% Similarity=0.147 Sum_probs=104.2
Q ss_pred cchhhHHHHHHhC---CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 226 QGKASSMVAAALA---PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 226 Qd~ss~l~~~~l~---~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|..-+..+...++ +++|++|||+|||||++|.++++.+++.|+|+|+|+++.+++.+.+..+.. .||.++.+|+.
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~ 135 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADAR 135 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTT
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccc
Confidence 4343333333333 789999999999999999999999988899999999999988777666553 58999999998
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHH-HHhCCCC-CcEEEEE
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR-HALSFPG-VERVVYS 380 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~-~a~~~~~-~G~lvYs 380 (441)
.........++||+|++|.+- |+ |.++|. .+.++|+ ||.++++
T Consensus 136 ~~~~~~~~~~~~D~I~~d~a~---------~~--------------------------~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 136 FPQSYKSVVENVDVLYVDIAQ---------PD--------------------------QTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CGGGTTTTCCCEEEEEECCCC---------TT--------------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhccccceEEEEecCCC---------hh--------------------------HHHHHHHHHHHhCCCCeEEEEE
Confidence 754221112689999999772 11 234443 3443666 7888865
Q ss_pred ---cC---CCCChhcHHHHHHHhchhcCCCeEEec
Q 013515 381 ---TC---SIHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 381 ---TC---S~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
+| |+.++||.+.+.++|+. .+|++.+
T Consensus 181 ik~~~~d~t~~~~e~~~~~~~~L~~---~gf~~~~ 212 (232)
T 3id6_C 181 IKARSIDVTKDPKEIYKTEVEKLEN---SNFETIQ 212 (232)
T ss_dssp EC-------CCSSSSTTHHHHHHHH---TTEEEEE
T ss_pred EccCCcccCCCHHHHHHHHHHHHHH---CCCEEEE
Confidence 99 99999999999899853 3688755
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.70 E-value=3.4e-17 Score=165.26 Aligned_cols=163 Identities=19% Similarity=0.220 Sum_probs=128.8
Q ss_pred ChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 013515 215 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 294 (441)
Q Consensus 215 ~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v 294 (441)
...++.|+|+.|...+.+++.+ +|++|||+|||+|+++.+++.. ..+|+++|+++.+++.+++|++.+|+.++
T Consensus 187 ~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~ 259 (382)
T 1wxx_A 187 RAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNV 259 (382)
T ss_dssp STTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTE
T ss_pred hhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 4567889999998887766554 6889999999999999999987 37999999999999999999999999889
Q ss_pred EEEeccCCCCCCCCC-CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 013515 295 EVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 373 (441)
Q Consensus 295 ~~~~~D~~~~~~~~~-~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~ 373 (441)
+++++|+.++..... ...+||+|++|||+.+.+ .+.+......+..++..++++++
T Consensus 260 ~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~Lk 316 (382)
T 1wxx_A 260 RVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG-----------------------KKDVERAYRAYKEVNLRAIKLLK 316 (382)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS-----------------------TTSHHHHHHHHHHHHHHHHHTEE
T ss_pred eEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC-----------------------hhHHHHHHHHHHHHHHHHHHhcC
Confidence 999999987643210 015799999999986532 22345667788899999999887
Q ss_pred -CcEEEEEcCCCCChhc--HHHHHHHhchhcCCCeEEe
Q 013515 374 -VERVVYSTCSIHQVEN--EDVIKSVLPIAMSFGFQLA 408 (441)
Q Consensus 374 -~G~lvYsTCS~~~~EN--e~vV~~~l~~~~~~~~~~~ 408 (441)
||.|+++||+.+..++ +.++.+.+.. ....+++.
T Consensus 317 pgG~l~~~~~~~~~~~~~~~~~i~~~~~~-~g~~~~~i 353 (382)
T 1wxx_A 317 EGGILATASCSHHMTEPLFYAMVAEAAQD-AHRLLRVV 353 (382)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHH-cCCeEEEE
Confidence 7999999999988775 5666655532 23345554
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.67 E-value=1.9e-16 Score=160.47 Aligned_cols=155 Identities=18% Similarity=0.189 Sum_probs=123.5
Q ss_pred hhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cE
Q 013515 216 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NI 294 (441)
Q Consensus 216 ~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v 294 (441)
..+++|+|..|.....++..++ ++|++|||+|||+|+++.+++.. +..+|+++|+++.+++.+++|++.+|++ ++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 4577899998988877776553 47899999999999999999875 3569999999999999999999999997 89
Q ss_pred EEEeccCCCCCCCCC-CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 013515 295 EVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 373 (441)
Q Consensus 295 ~~~~~D~~~~~~~~~-~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~ 373 (441)
+++++|+.+...... ...+||+|++|||+.+.+ ...+......+..++..++++++
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQH-----------------------EKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSS-----------------------GGGHHHHHHHHHHHHHHHHTTEE
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCC-----------------------HHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999877543100 015799999999975422 23345666778899999999988
Q ss_pred -CcEEEEEcCCCCChhc--HHHHHHHh
Q 013515 374 -VERVVYSTCSIHQVEN--EDVIKSVL 397 (441)
Q Consensus 374 -~G~lvYsTCS~~~~EN--e~vV~~~l 397 (441)
||.|+|+||+.+..++ ++++.+..
T Consensus 327 pgG~lv~~~~~~~~~~~~~~~~v~~~~ 353 (396)
T 2as0_A 327 DGGILVTCSCSQHVDLQMFKDMIIAAG 353 (396)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHH
Confidence 7899999999876654 56666554
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.66 E-value=9.9e-17 Score=162.61 Aligned_cols=166 Identities=14% Similarity=0.080 Sum_probs=126.7
Q ss_pred CChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-C
Q 013515 214 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-A 292 (441)
Q Consensus 214 ~~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~ 292 (441)
..+.+++|+|..|.....++..+ .+|++|||+|||+|+++++++.. +..+|+++|+++.+++.+++|++.+|+ +
T Consensus 196 ~~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~ 270 (396)
T 3c0k_A 196 IQHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDL 270 (396)
T ss_dssp TTTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred ccccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 34678899999999988887776 47899999999999999999885 346999999999999999999999998 6
Q ss_pred -cEEEEeccCCCCCCCCC-CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhC
Q 013515 293 -NIEVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 370 (441)
Q Consensus 293 -~v~~~~~D~~~~~~~~~-~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~ 370 (441)
+++++++|+.++..... ...+||.|++|||+.+.+-- +. ......+..++..+++
T Consensus 271 ~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~----~~-------------------~~~~~~~~~~l~~~~~ 327 (396)
T 3c0k_A 271 SKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKS----QL-------------------MGACRGYKDINMLAIQ 327 (396)
T ss_dssp GGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSS----SS-------------------SCCCTHHHHHHHHHHH
T ss_pred cceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChh----HH-------------------HHHHHHHHHHHHHHHH
Confidence 89999999987643110 01579999999998654310 00 0111235678888988
Q ss_pred CCC-CcEEEEEcCCCCCh--hcHHHHHHHhchhcCCCeEEe
Q 013515 371 FPG-VERVVYSTCSIHQV--ENEDVIKSVLPIAMSFGFQLA 408 (441)
Q Consensus 371 ~~~-~G~lvYsTCS~~~~--ENe~vV~~~l~~~~~~~~~~~ 408 (441)
+++ +|.+++|+|+.+.. +++++|.+.+... ...+++.
T Consensus 328 ~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~-g~~~~~i 367 (396)
T 3c0k_A 328 LLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA-GRDVQFI 367 (396)
T ss_dssp TEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred hcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHc-CCeEEEE
Confidence 887 78999999998876 6678887665432 3345543
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.64 E-value=2.3e-16 Score=170.54 Aligned_cols=152 Identities=14% Similarity=0.178 Sum_probs=120.8
Q ss_pred ChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC--
Q 013515 215 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-- 292 (441)
Q Consensus 215 ~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-- 292 (441)
.+.++.|.|..|.....++..+. +|.+|||+|||+|+++++++.. +..+|+++|+|+.+++.+++|++.+|++
T Consensus 516 ~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~ 590 (703)
T 3v97_A 516 TDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGR 590 (703)
T ss_dssp SSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCST
T ss_pred cccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCcc
Confidence 46789999999999998888764 5899999999999999998873 4578999999999999999999999986
Q ss_pred cEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 013515 293 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 372 (441)
Q Consensus 293 ~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~ 372 (441)
+++++++|+.++.... .++||+|++||||.+.+.. ..++......+.+++..+.+++
T Consensus 591 ~v~~i~~D~~~~l~~~--~~~fD~Ii~DPP~f~~~~~---------------------~~~~~~~~~~~~~ll~~a~~~L 647 (703)
T 3v97_A 591 AHRLIQADCLAWLREA--NEQFDLIFIDPPTFSNSKR---------------------MEDAFDVQRDHLALMKDLKRLL 647 (703)
T ss_dssp TEEEEESCHHHHHHHC--CCCEEEEEECCCSBC----------------------------CCBHHHHHHHHHHHHHHHE
T ss_pred ceEEEecCHHHHHHhc--CCCccEEEECCccccCCcc---------------------chhHHHHHHHHHHHHHHHHHhc
Confidence 7999999998753222 1679999999999764321 0111234567789999999988
Q ss_pred C-CcEEEEEcCCCCChhcHHHHH
Q 013515 373 G-VERVVYSTCSIHQVENEDVIK 394 (441)
Q Consensus 373 ~-~G~lvYsTCS~~~~ENe~vV~ 394 (441)
+ ||.|++|+|+-....+++.+.
T Consensus 648 kpgG~L~~s~~~~~~~~~~~~l~ 670 (703)
T 3v97_A 648 RAGGTIMFSNNKRGFRMDLDGLA 670 (703)
T ss_dssp EEEEEEEEEECCTTCCCCHHHHH
T ss_pred CCCcEEEEEECCcccccCHHHHH
Confidence 7 799999999977666765554
No 16
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.63 E-value=9.4e-17 Score=154.58 Aligned_cols=199 Identities=11% Similarity=0.081 Sum_probs=120.4
Q ss_pred CCCCCCCCceEEecCCCCCHHHHH-HHHcc-cCcccccCCCCCeE-EeCCCCCCCCChhhhcCcccccchhhHHHHHHhC
Q 013515 162 QTPDVPKPRYVRVNTLKMDVDSAV-LELGK-QFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALA 238 (441)
Q Consensus 162 ~~~~~~~p~~~RvN~~k~~~~~~~-~~L~~-~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~g~~~~Qd~ss~l~~~~l~ 238 (441)
.+++..+++|.|+|+.+.+.+.+. +.|.. ++..... .....+ .+.+ ........+..+...+++..+.+++..++
T Consensus 30 ~~~~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (275)
T 1yb2_A 30 VSEDEYGKFDESTNSILVKGKMHHLGISRVIEPGDELI-VSGKSFIVSDF-SPMYFGRVIRRNTQIISEIDASYIIMRCG 107 (275)
T ss_dssp ECSSCCEEEETTTTEEEC-CCEEECC-CCCCCTTCEEE-ETTEEEEEECC-CGGGHHHHC------------------CC
T ss_pred EecCCCCceeccccceeccCCccchhheeCCCCCcEEE-ECCeEEEEeCC-CHHHHHhhccccccccChhhHHHHHHHcC
Confidence 455667899999997665433211 11111 1111111 111122 2221 12222344555667788888888888999
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~-g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+.+|.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.++++++.. |.+++.+.++|+.+..+ . ++||+|
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~-~---~~fD~V 183 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS-D---QMYDAV 183 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC-S---CCEEEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc-C---CCccEE
Confidence 999999999999999999999998666689999999999999999999998 88899999999987322 1 579999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHH
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSV 396 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~ 396 (441)
++|+|. + ..+|..+.+.++ ||.+++++|+.. ....+.+.
T Consensus 184 i~~~~~---------~----------------------------~~~l~~~~~~LkpgG~l~i~~~~~~---~~~~~~~~ 223 (275)
T 1yb2_A 184 IADIPD---------P----------------------------WNHVQKIASMMKPGSVATFYLPNFD---QSEKTVLS 223 (275)
T ss_dssp EECCSC---------G----------------------------GGSHHHHHHTEEEEEEEEEEESSHH---HHHHHHHH
T ss_pred EEcCcC---------H----------------------------HHHHHHHHHHcCCCCEEEEEeCCHH---HHHHHHHH
Confidence 998872 1 145777888777 789999988642 22223333
Q ss_pred hchhcCCCeEEec
Q 013515 397 LPIAMSFGFQLAT 409 (441)
Q Consensus 397 l~~~~~~~~~~~~ 409 (441)
| ...+|+.++
T Consensus 224 l---~~~Gf~~~~ 233 (275)
T 1yb2_A 224 L---SASGMHHLE 233 (275)
T ss_dssp S---GGGTEEEEE
T ss_pred H---HHCCCeEEE
Confidence 3 235676544
No 17
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.61 E-value=1.2e-15 Score=154.06 Aligned_cols=157 Identities=15% Similarity=0.096 Sum_probs=118.4
Q ss_pred ChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC--
Q 013515 215 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-- 292 (441)
Q Consensus 215 ~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-- 292 (441)
.+++++|.|..|.....++..++ .+|.+|||+|||+|+++++++.. +..+|+++|+++.+++.+++|++.+|++
T Consensus 188 ~~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~ 263 (385)
T 2b78_A 188 NDGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMA 263 (385)
T ss_dssp SSSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCT
T ss_pred cccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 45678899988888888877665 57899999999999999999874 3458999999999999999999999996
Q ss_pred cEEEEeccCCCCCCCC-CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 013515 293 NIEVLHGDFLNLDPKD-PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 371 (441)
Q Consensus 293 ~v~~~~~D~~~~~~~~-~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~ 371 (441)
+++++++|+.+..... ....+||+|++|||+.+.+-- .+......+.+++..+.++
T Consensus 264 ~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~-----------------------~~~~~~~~~~~ll~~~~~~ 320 (385)
T 2b78_A 264 NHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKK-----------------------EVFSVSKDYHKLIRQGLEI 320 (385)
T ss_dssp TEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC----------------------------CCCCHHHHHHHHHHHHHHT
T ss_pred ceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChh-----------------------hHHHHHHHHHHHHHHHHHh
Confidence 8999999987643211 001479999999999653210 0012334567788999888
Q ss_pred CC-CcEEEEEcCCCCC--hhcHHHHHHHhc
Q 013515 372 PG-VERVVYSTCSIHQ--VENEDVIKSVLP 398 (441)
Q Consensus 372 ~~-~G~lvYsTCS~~~--~ENe~vV~~~l~ 398 (441)
++ +|.|++++|+-+. ++..+++...+.
T Consensus 321 L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~ 350 (385)
T 2b78_A 321 LSENGLIIASTNAANMTVSQFKKQIEKGFG 350 (385)
T ss_dssp EEEEEEEEEEECCTTSCHHHHHHHHHHHHT
T ss_pred cCCCcEEEEEeCCCcCCHHHHHHHHHHHHH
Confidence 87 7899999998775 444566666553
No 18
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.60 E-value=2.7e-15 Score=148.42 Aligned_cols=166 Identities=18% Similarity=0.144 Sum_probs=119.2
Q ss_pred ChhhhcCcccccchhhHHHHHHhC-CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 215 HPLIVNGCVFLQGKASSMVAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 215 ~~~~~~g~~~~Qd~ss~l~~~~l~-~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
...++.|++..|......+...+. ..+|.+|||+|||+|+.++.++.. + .+|+++|+++.+++.+++|++.+|+++
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~ 202 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQ 202 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTT
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 456778999999988877777775 456889999999999999999874 3 399999999999999999999999864
Q ss_pred --EEEEeccCCCCCCCCC-CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhC
Q 013515 294 --IEVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 370 (441)
Q Consensus 294 --v~~~~~D~~~~~~~~~-~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~ 370 (441)
++++++|+.++..... ...+||+|++||||.+.+... +. + .....+..++..+.+
T Consensus 203 ~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~---~~-------------~------~~~~~~~~ll~~~~~ 260 (332)
T 2igt_A 203 APIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHG---EV-------------W------QLFDHLPLMLDICRE 260 (332)
T ss_dssp SCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTC---CE-------------E------EHHHHHHHHHHHHHH
T ss_pred cceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchH---HH-------------H------HHHHHHHHHHHHHHH
Confidence 9999999987643100 015799999999997755210 00 0 122345678999989
Q ss_pred CCC-CcE-EEEEcCCCCChhcHHHHHHHhch-hcCCCeEE
Q 013515 371 FPG-VER-VVYSTCSIHQVENEDVIKSVLPI-AMSFGFQL 407 (441)
Q Consensus 371 ~~~-~G~-lvYsTCS~~~~ENe~vV~~~l~~-~~~~~~~~ 407 (441)
+++ +|. ++.++|+... ++....+++.. +...++++
T Consensus 261 ~LkpgG~lli~~~~~~~~--~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 261 ILSPKALGLVLTAYSIRA--SFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp TBCTTCCEEEEEECCTTS--CHHHHHHHHHHHTTTSCSEE
T ss_pred hcCcCcEEEEEECCCCCC--CHHHHHHHHHHHHHHcCCeE
Confidence 887 675 6666676553 33444444432 22345444
No 19
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.59 E-value=4.1e-15 Score=141.77 Aligned_cols=167 Identities=16% Similarity=0.218 Sum_probs=110.9
Q ss_pred cCcccccchh-------hHHHHHHhCCC-CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q 013515 220 NGCVFLQGKA-------SSMVAAALAPK-PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 291 (441)
Q Consensus 220 ~g~~~~Qd~s-------s~l~~~~l~~~-~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~ 291 (441)
.+..+.|+.. +.+++.++.+. ++.+|||+|||+|..+..++... + .+|+++|+++.+++.+++|++.+|+
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCC
Confidence 3444555554 78888899888 89999999999999999998873 2 4999999999999999999999998
Q ss_pred C-cEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCC-cccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHh
Q 013515 292 A-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS-GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 369 (441)
Q Consensus 292 ~-~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~-G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~ 369 (441)
. +++++++|+.++....+ .++||.|++|||+... +.....++... ...+ .........++..+.
T Consensus 98 ~~~v~~~~~D~~~~~~~~~-~~~fD~Ii~npPy~~~~~~~~~~~~~~~------------~~a~-~~~~~~~~~~l~~~~ 163 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLIP-KERADIVTCNPPYFATPDTSLKNTNEHF------------RIAR-HEVMCTLEDTIRVAA 163 (259)
T ss_dssp TTTEEEECSCGGGGGGTSC-TTCEEEEEECCCC------------------------------------HHHHHHHHHHH
T ss_pred cccEEEEECcHHHhhhhhc-cCCccEEEECCCCCCCccccCCCCchHH------------Hhhh-ccccCCHHHHHHHHH
Confidence 5 69999999998764321 2689999999999766 21112221100 0000 111123357888888
Q ss_pred CCCC-CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEec
Q 013515 370 SFPG-VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 370 ~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
++++ +|.++++ ++.++...+...+. ..+|+...
T Consensus 164 ~~LkpgG~l~~~----~~~~~~~~~~~~l~---~~~~~~~~ 197 (259)
T 3lpm_A 164 SLLKQGGKANFV----HRPERLLDIIDIMR---KYRLEPKR 197 (259)
T ss_dssp HHEEEEEEEEEE----ECTTTHHHHHHHHH---HTTEEEEE
T ss_pred HHccCCcEEEEE----EcHHHHHHHHHHHH---HCCCceEE
Confidence 8887 6887774 23344444445553 34565543
No 20
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=4.6e-14 Score=140.76 Aligned_cols=148 Identities=25% Similarity=0.302 Sum_probs=117.4
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
++..-+..+..++...++..|||+|||+|..+..++...++..+|+++|+++.+++.+++|++..|+.+|++.++|+.++
T Consensus 187 l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~ 266 (354)
T 3tma_A 187 LTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL 266 (354)
T ss_dssp CCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG
T ss_pred cCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC
Confidence 33334455566778889999999999999999999988645589999999999999999999999998899999999998
Q ss_pred CCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 305 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+... ..||.|++||||.- + ......+..++..++..+.+.++ ||.++++||
T Consensus 267 ~~~~---~~~D~Ii~npPyg~-----r-------------------~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~- 318 (354)
T 3tma_A 267 PRFF---PEVDRILANPPHGL-----R-------------------LGRKEGLFHLYWDFLRGALALLPPGGRVALLTL- 318 (354)
T ss_dssp GGTC---CCCSEEEECCCSCC----------------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-
T ss_pred cccc---CCCCEEEECCCCcC-----c-------------------cCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-
Confidence 7543 46899999999831 0 11123566788899999999886 799999988
Q ss_pred CCChhcHHHHHHHhchhcCCCeEEec
Q 013515 384 IHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 384 ~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
|+..+..+++ .+|+...
T Consensus 319 -----~~~~~~~~~~----~g~~~~~ 335 (354)
T 3tma_A 319 -----RPALLKRALP----PGFALRH 335 (354)
T ss_dssp -----CHHHHHHHCC----TTEEEEE
T ss_pred -----CHHHHHHHhh----cCcEEEE
Confidence 5677777763 5676644
No 21
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=2.6e-14 Score=132.84 Aligned_cols=128 Identities=15% Similarity=0.134 Sum_probs=98.8
Q ss_pred ccccchh-hHHHHHHhC--CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcE
Q 013515 223 VFLQGKA-SSMVAAALA--PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG-----AANI 294 (441)
Q Consensus 223 ~~~Qd~s-s~l~~~~l~--~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g-----~~~v 294 (441)
..+|+.. ...+...+. +.++.+|||+|||+|.++.+++..+++.++|+++|+++.+++.+++++...| .+++
T Consensus 56 ~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v 135 (226)
T 1i1n_A 56 ATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV 135 (226)
T ss_dssp EEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE
T ss_pred ceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE
Confidence 3444433 334445554 7889999999999999999999987666799999999999999999999876 4689
Q ss_pred EEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-
Q 013515 295 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG- 373 (441)
Q Consensus 295 ~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~- 373 (441)
.++++|+....... ..||+|+++++|.. ++..+.+.++
T Consensus 136 ~~~~~d~~~~~~~~---~~fD~i~~~~~~~~--------------------------------------~~~~~~~~Lkp 174 (226)
T 1i1n_A 136 QLVVGDGRMGYAEE---APYDAIHVGAAAPV--------------------------------------VPQALIDQLKP 174 (226)
T ss_dssp EEEESCGGGCCGGG---CCEEEEEECSBBSS--------------------------------------CCHHHHHTEEE
T ss_pred EEEECCcccCcccC---CCcCEEEECCchHH--------------------------------------HHHHHHHhcCC
Confidence 99999987654322 57999999999721 1234556666
Q ss_pred CcEEEEEcCCCCChhcHH
Q 013515 374 VERVVYSTCSIHQVENED 391 (441)
Q Consensus 374 ~G~lvYsTCS~~~~ENe~ 391 (441)
||.+++++|+...+++..
T Consensus 175 gG~lv~~~~~~~~~~~~~ 192 (226)
T 1i1n_A 175 GGRLILPVGPAGGNQMLE 192 (226)
T ss_dssp EEEEEEEESCTTSCEEEE
T ss_pred CcEEEEEEecCCCceEEE
Confidence 799999999987766653
No 22
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.53 E-value=1e-13 Score=133.36 Aligned_cols=163 Identities=13% Similarity=0.128 Sum_probs=115.4
Q ss_pred CcccccchhhHHHHHHhCC--CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 013515 221 GCVFLQGKASSMVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 298 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l~~--~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~ 298 (441)
+.++.+.....++..+++. .++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++|++.+|++++.+++
T Consensus 87 ~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~ 165 (276)
T 2b3t_A 87 ATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQ 165 (276)
T ss_dssp TSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred CCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 3344455555555554432 568899999999999999999876 4579999999999999999999999998899999
Q ss_pred ccCCCCCCCCCCCCCccEEEEcCCCCCCcc-------cccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 013515 299 GDFLNLDPKDPAYSEVRAILLDPSCSGSGT-------AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 371 (441)
Q Consensus 299 ~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~-------~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~ 371 (441)
+|+.+.... ++||.|+++|||.+.+. ....|+..+- .. ......+..++..+.++
T Consensus 166 ~d~~~~~~~----~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~-----------~~---~~g~~~~~~~l~~~~~~ 227 (276)
T 2b3t_A 166 SDWFSALAG----QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALV-----------AA---DSGMADIVHIIEQSRNA 227 (276)
T ss_dssp CSTTGGGTT----CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTB-----------CH---HHHTHHHHHHHHHHGGG
T ss_pred cchhhhccc----CCccEEEECCCCCCccccccChhhhhcCcHHHHc-----------CC---CcHHHHHHHHHHHHHHh
Confidence 999875321 57999999999998753 2222222110 01 12224557899999998
Q ss_pred CC-CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEec
Q 013515 372 PG-VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 372 ~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
++ ||.++++++. .+.+.+.++++. .+|+.+.
T Consensus 228 LkpgG~l~~~~~~----~~~~~~~~~l~~---~Gf~~v~ 259 (276)
T 2b3t_A 228 LVSGGFLLLEHGW----QQGEAVRQAFIL---AGYHDVE 259 (276)
T ss_dssp EEEEEEEEEECCS----SCHHHHHHHHHH---TTCTTCC
T ss_pred cCCCCEEEEEECc----hHHHHHHHHHHH---CCCcEEE
Confidence 87 7888887554 344556666643 3564433
No 23
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.53 E-value=1.9e-14 Score=138.82 Aligned_cols=140 Identities=17% Similarity=0.192 Sum_probs=105.2
Q ss_pred CcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEec
Q 013515 221 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHG 299 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~ 299 (441)
+++..|......+...+ ++|++|||+|||+|+.+..++... . .+|+|+|+++.+++.+++|++.+|+.+ ++++++
T Consensus 107 ~f~~~~~~~~~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~-~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 107 MFSPANVKERVRMAKVA--KPDELVVDMFAGIGHLSLPIAVYG-K-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCCGGGHHHHHHHHHHC--CTTCEEEETTCTTTTTHHHHHHHT-C-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred eEcCCcHHHHHHHHHhC--CCCCEEEEecccCCHHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 33444445555555554 579999999999999999999873 2 389999999999999999999999965 999999
Q ss_pred cCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEE
Q 013515 300 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVV 378 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lv 378 (441)
|+.++.. . .+||+|++|||++. ..++..+.+.++ ||.++
T Consensus 183 D~~~~~~-~---~~fD~Vi~~~p~~~------------------------------------~~~l~~~~~~LkpgG~l~ 222 (278)
T 2frn_A 183 DNRDFPG-E---NIADRILMGYVVRT------------------------------------HEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp CTTTCCC-C---SCEEEEEECCCSSG------------------------------------GGGHHHHHHHEEEEEEEE
T ss_pred CHHHhcc-c---CCccEEEECCchhH------------------------------------HHHHHHHHHHCCCCeEEE
Confidence 9998876 2 68999999999532 134666777676 79999
Q ss_pred EEcCCCC---ChhcHHHHHHHhchhcCCCeEE
Q 013515 379 YSTCSIH---QVENEDVIKSVLPIAMSFGFQL 407 (441)
Q Consensus 379 YsTCS~~---~~ENe~vV~~~l~~~~~~~~~~ 407 (441)
+++|+-. .++..+.+...++ ..+|++
T Consensus 223 ~~~~~~~~~~~~~~~~~i~~~~~---~~G~~~ 251 (278)
T 2frn_A 223 YHNTVPEKLMPREPFETFKRITK---EYGYDV 251 (278)
T ss_dssp EEEEEEGGGTTTTTHHHHHHHHH---HTTCEE
T ss_pred EEEeeccccccccHHHHHHHHHH---HcCCee
Confidence 9999842 3444455555553 345544
No 24
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.52 E-value=1e-14 Score=146.77 Aligned_cols=130 Identities=13% Similarity=0.008 Sum_probs=100.8
Q ss_pred hcCcc-cccchhhHHHHH---HhCC--CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 013515 219 VNGCV-FLQGKASSMVAA---ALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 292 (441)
Q Consensus 219 ~~g~~-~~Qd~ss~l~~~---~l~~--~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~ 292 (441)
..++| ..|..+..+... .+.. ++|.+|||+|||+|++++.++..+++.++|+++|+++.+++.+++|++.+|+.
T Consensus 24 ~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 24 MPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP 103 (392)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 45555 356666655432 2222 57899999999999999999987655579999999999999999999999997
Q ss_pred c--EEEEeccCCCCCC-CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHh
Q 013515 293 N--IEVLHGDFLNLDP-KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 369 (441)
Q Consensus 293 ~--v~~~~~D~~~~~~-~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~ 369 (441)
+ ++++++|+..+.. .. .+.||+|++||+|+. ..++..|+
T Consensus 104 ~~~v~v~~~Da~~~l~~~~--~~~fD~V~lDP~g~~------------------------------------~~~l~~a~ 145 (392)
T 3axs_A 104 EDRYEIHGMEANFFLRKEW--GFGFDYVDLDPFGTP------------------------------------VPFIESVA 145 (392)
T ss_dssp GGGEEEECSCHHHHHHSCC--SSCEEEEEECCSSCC------------------------------------HHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHhh--CCCCcEEEECCCcCH------------------------------------HHHHHHHH
Confidence 6 9999999977643 32 157999999997531 24677888
Q ss_pred CCCCCcEEEEEcCCCCC
Q 013515 370 SFPGVERVVYSTCSIHQ 386 (441)
Q Consensus 370 ~~~~~G~lvYsTCS~~~ 386 (441)
++++.|.++|+|||-..
T Consensus 146 ~~Lk~gGll~~t~t~~~ 162 (392)
T 3axs_A 146 LSMKRGGILSLTATDTA 162 (392)
T ss_dssp HHEEEEEEEEEEECCHH
T ss_pred HHhCCCCEEEEEecchh
Confidence 87775559999998755
No 25
>1tzv_A NUSB protein, N utilization substance protein B homolog; RNA-protein interaction, transcriptional antitermination, transcription regulation; 1.35A {Thermotoga maritima} SCOP: a.79.1.1 PDB: 1tzu_A 1tzt_A 1tzw_A 1tzx_A*
Probab=99.52 E-value=1e-13 Score=120.19 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=87.7
Q ss_pred cHHHHHHHHHHHHHHHccCh-hhH-HHHhhhhhhcCCCccCHHHHHHHHHHHHhcHHHHHHHhhhhhcccc-ccc----c
Q 013515 31 AYFARREAAKVLRLVLRGDA-RRR-AVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNS-KWK----R 103 (441)
Q Consensus 31 ~~~~R~~A~~vL~~v~~~~~-~~~-~~~~~~~~~~~~~~~dr~~~~~Lv~GvlR~~~~Ld~il~~~~~l~~-~~~----~ 103 (441)
...+|+.|+++|++++.++. +.+ ++..... ...+.+|++|+++|||||+|++..||++|.+ ++++ ++. .
T Consensus 5 r~~aR~~A~~~L~~~~~~~~~~~~~~l~~~~~--~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~--~l~~w~l~rl~~~ 80 (142)
T 1tzv_A 5 RRRMRLAVFKALFQHEFRRDEDLEQILEEILD--ETYDKKAKEDARRYIRGIKENLSMIDDLISR--YLEKWSLNRLSVV 80 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCTTSCHHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHTHHHHHHHHHT--TCSSSCGGGSCHH
T ss_pred hHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCCChHHCCHH
Confidence 44699999999999988665 544 3322211 2345679999999999999999999999997 5654 322 2
Q ss_pred hHHHHHHHHHHHHhcCCCCchHHHHHHHHHhhHH---HHHHHHHHHHHc
Q 013515 104 QEELVYILTYDILFGQEISLVGDAEKFLMLHKGA---IQLALAQLLVRN 149 (441)
Q Consensus 104 ~~~lL~l~~yql~f~~~ip~~~~i~~~v~~~k~~---~~~~l~~~~~~~ 149 (441)
++.+||+|+||++|++++|.+++|||+|+.+|.. -...|.|.++++
T Consensus 81 ~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVL~~ 129 (142)
T 1tzv_A 81 DRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDR 129 (142)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHCCCcchhhHHHHHHH
Confidence 4889999999999998899999999999998752 224566665554
No 26
>3d3b_A Protein NUSB, N utilization substance protein B; NUSB, NUSE, NUT site, phage lambda, lambdan antitermina antitermination; HET: NHE; 1.30A {Escherichia coli} PDB: 3d3c_A 3imq_A 1ey1_A
Probab=99.52 E-value=1.2e-13 Score=119.65 Aligned_cols=115 Identities=9% Similarity=0.003 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHccC-hhhHHHHhhhhhhcCCCccCHHHHHHHHHHHHhcHHHHHHHhhhhhccccccc----chHH
Q 013515 32 YFARREAAKVLRLVLRGD-ARRRAVGSIKSLVYSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNSKWK----RQEE 106 (441)
Q Consensus 32 ~~~R~~A~~vL~~v~~~~-~~~~~~~~~~~~~~~~~~~dr~~~~~Lv~GvlR~~~~Ld~il~~~~~l~~~~~----~~~~ 106 (441)
..+|+.|+++|++++.++ .+++++..... ....+..|++|+++|||||+|++..||++|.+ ++++++. .++.
T Consensus 9 ~~aR~~A~~~L~~~~~~~~~~~~~~~~~~~-~~~l~~~d~~~~~~Lv~gvl~~~~~lD~~I~~--~l~~~l~rl~~~~r~ 85 (141)
T 3d3b_A 9 RRARECAVQALYSWQLSQNDIADVEYQFLA-EQDVKDVDVLYFRELLAGVATNTAYLDGLMKP--YLSRLLEELGQVEKA 85 (141)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHHHHHHH-HSCCTTSCHHHHHHHHHHHHHTHHHHHHHHGG--GGTTCSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHhHHHHHHHHHH--HcCCCHHHcCHHHHH
Confidence 359999999999997643 44544432211 12345689999999999999999999999998 5664433 2488
Q ss_pred HHHHHHHHHHhcCCCCchHHHHHHHHHhhHH---HHHHHHHHHHHc
Q 013515 107 LVYILTYDILFGQEISLVGDAEKFLMLHKGA---IQLALAQLLVRN 149 (441)
Q Consensus 107 lL~l~~yql~f~~~ip~~~~i~~~v~~~k~~---~~~~l~~~~~~~ 149 (441)
+||+|+||++|++++|.+++|||+|+.+|.. -...|.|-+++.
T Consensus 86 iLrla~yEll~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~ 131 (141)
T 3d3b_A 86 VLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDK 131 (141)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchhhHHHHHHHHHHHCCCCchHHHHHHHHH
Confidence 9999999999998899999999999998752 124566665554
No 27
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.52 E-value=8.2e-14 Score=126.58 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=116.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
.+++|++|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+ +++.++++|+.++..... ++||.
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYID--CPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCC--SCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhcc--CCceE
Confidence 457899999999999999999999876667999999999999999999999998 789999999988763322 68999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC--hhcHHHH
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ--VENEDVI 393 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~--~ENe~vV 393 (441)
|++|+|.-..+ +.... ...+ .+.+++..+.++++ ||.++.++++-++ .++...+
T Consensus 97 v~~~~~~~~~~------~~~~~----------~~~~-------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~ 153 (197)
T 3eey_A 97 VMFNLGYLPSG------DHSIS----------TRPE-------TTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKV 153 (197)
T ss_dssp EEEEESBCTTS------CTTCB----------CCHH-------HHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHH
T ss_pred EEEcCCcccCc------ccccc----------cCcc-------cHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHH
Confidence 99999751111 10000 0111 23457888888777 6888777654332 2334455
Q ss_pred HHHhchhcCCCeEEecCCCCCCC-ccccccccceeeeecccCC
Q 013515 394 KSVLPIAMSFGFQLATPFPNGTA-EASQFLKALSIYFEPIQWK 435 (441)
Q Consensus 394 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~p~~~~ 435 (441)
..+++.....+|++... .-+.. ..+...-..+..++|++|.
T Consensus 154 ~~~~~~l~~~~~~v~~~-~~~~~~~~pp~~~~~~~~~~~~~~~ 195 (197)
T 3eey_A 154 LEFLKGVDQKKFIVQRT-DFINQANCPPILVCIEKISEGHHHH 195 (197)
T ss_dssp HHHHTTSCTTTEEEEEE-EETTCCSCCCEEEEEEECCSSCCCC
T ss_pred HHHHHhCCCCcEEEEEE-EeccCccCCCeEEEEEEcccccccc
Confidence 66665545566776442 11111 1122222334667777664
No 28
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.51 E-value=1.8e-13 Score=137.57 Aligned_cols=144 Identities=8% Similarity=0.064 Sum_probs=109.3
Q ss_pred hhhhcCcccccchhhHHHHHHh-CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 013515 216 PLIVNGCVFLQGKASSMVAAAL-APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 294 (441)
Q Consensus 216 ~~~~~g~~~~Qd~ss~l~~~~l-~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v 294 (441)
..|.+++...|+..+.++.... ...+|.+|||+| |+|..+..++.. ++.++|+++|+++.+++.+++|++++|+.+|
T Consensus 146 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v 223 (373)
T 2qm3_A 146 HEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDI 223 (373)
T ss_dssp GGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCE
T ss_pred hhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCE
Confidence 3466677777877766664432 334689999999 999999999876 3447999999999999999999999998889
Q ss_pred EEEeccCCC-CCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 013515 295 EVLHGDFLN-LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 373 (441)
Q Consensus 295 ~~~~~D~~~-~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~ 373 (441)
+++.+|+.+ ++... .++||+|++||||+..| ...+|..+.+.++
T Consensus 224 ~~~~~D~~~~l~~~~--~~~fD~Vi~~~p~~~~~---------------------------------~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 224 EIFTFDLRKPLPDYA--LHKFDTFITDPPETLEA---------------------------------IRAFVGRGIATLK 268 (373)
T ss_dssp EEECCCTTSCCCTTT--SSCBSEEEECCCSSHHH---------------------------------HHHHHHHHHHTBC
T ss_pred EEEEChhhhhchhhc--cCCccEEEECCCCchHH---------------------------------HHHHHHHHHHHcc
Confidence 999999988 44321 15799999999974211 1578899998887
Q ss_pred -Cc-EEEEEcCCCCChhcH---HHHHHHhc
Q 013515 374 -VE-RVVYSTCSIHQVENE---DVIKSVLP 398 (441)
Q Consensus 374 -~G-~lvYsTCS~~~~ENe---~vV~~~l~ 398 (441)
|| .++|++|+ ..++. ..+.+++.
T Consensus 269 pgG~~~~~~~~~--~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 269 GPRCAGYFGITR--RESSLDKWREIQKLLL 296 (373)
T ss_dssp STTCEEEEEECT--TTCCHHHHHHHHHHHH
T ss_pred cCCeEEEEEEec--CcCCHHHHHHHHHHHH
Confidence 68 56898887 23444 55666663
No 29
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.51 E-value=3.2e-14 Score=133.18 Aligned_cols=99 Identities=21% Similarity=0.209 Sum_probs=78.6
Q ss_pred ccccchh-hHHHHHH------hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEE
Q 013515 223 VFLQGKA-SSMVAAA------LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE 295 (441)
Q Consensus 223 ~~~Qd~s-s~l~~~~------l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~ 295 (441)
|..-|+- |.|++.+ +.++||++|||+|||+|..+.++|+.+++.|+|+|+|+++++++.++++++.. .|+.
T Consensus 52 ~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~ 129 (233)
T 4df3_A 52 YREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIF 129 (233)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEE
T ss_pred eeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCee
Confidence 4444432 4555554 44899999999999999999999999999999999999999999999988765 4899
Q ss_pred EEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 296 VLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 296 ~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
.+.+|...........+.+|+|++|.+.
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~~~ 157 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADVAQ 157 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECCCC
T ss_pred EEEEeccCccccccccceEEEEEEeccC
Confidence 9999887654221123689999999884
No 30
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.51 E-value=1.4e-14 Score=145.49 Aligned_cols=123 Identities=21% Similarity=0.155 Sum_probs=96.5
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh---------------
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--------------- 289 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--------------- 289 (441)
.|+....+....+...+|.+|||+|||+|.+++.++..++ ..+|+++|+++.+++.+++|++.+
T Consensus 31 ~~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~ 109 (378)
T 2dul_A 31 RMALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILK 109 (378)
T ss_dssp GGHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEE
T ss_pred chHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhccccccccccccccc
Confidence 4555555533333323689999999999999999999864 368999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHh
Q 013515 290 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 369 (441)
Q Consensus 290 g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~ 369 (441)
|+.+++++++|+..+.... ...||+|++||||+. ..+|+.|+
T Consensus 110 gl~~i~v~~~Da~~~~~~~--~~~fD~I~lDP~~~~------------------------------------~~~l~~a~ 151 (378)
T 2dul_A 110 GEKTIVINHDDANRLMAER--HRYFHFIDLDPFGSP------------------------------------MEFLDTAL 151 (378)
T ss_dssp SSSEEEEEESCHHHHHHHS--TTCEEEEEECCSSCC------------------------------------HHHHHHHH
T ss_pred CCCceEEEcCcHHHHHHhc--cCCCCEEEeCCCCCH------------------------------------HHHHHHHH
Confidence 8878999999997764322 157999999999752 25678888
Q ss_pred CCCCCcEEEEEcCCCCC
Q 013515 370 SFPGVERVVYSTCSIHQ 386 (441)
Q Consensus 370 ~~~~~G~lvYsTCS~~~ 386 (441)
+.++.|.++|.|||-..
T Consensus 152 ~~lk~gG~l~vt~td~~ 168 (378)
T 2dul_A 152 RSAKRRGILGVTATDGA 168 (378)
T ss_dssp HHEEEEEEEEEEECCHH
T ss_pred HhcCCCCEEEEEeecch
Confidence 87775558999998554
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.50 E-value=5.6e-13 Score=121.92 Aligned_cols=136 Identities=12% Similarity=0.101 Sum_probs=107.6
Q ss_pred cCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec
Q 013515 220 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 299 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~ 299 (441)
+|.+ .++.....+...+.+.++++|||+|||+|..+..++... +.++|+++|+++.+++.++++++.+|++++.++.+
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 3666 555566677778889999999999999999999999884 45899999999999999999999999989999999
Q ss_pred cCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEE
Q 013515 300 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVV 378 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lv 378 (441)
|+.+..... ..||.|+++.+.. + ...++..+.+.++ ||.++
T Consensus 98 d~~~~~~~~---~~~D~i~~~~~~~---------~--------------------------~~~~l~~~~~~LkpgG~l~ 139 (204)
T 3e05_A 98 FAPEGLDDL---PDPDRVFIGGSGG---------M--------------------------LEEIIDAVDRRLKSEGVIV 139 (204)
T ss_dssp CTTTTCTTS---CCCSEEEESCCTT---------C--------------------------HHHHHHHHHHHCCTTCEEE
T ss_pred ChhhhhhcC---CCCCEEEECCCCc---------C--------------------------HHHHHHHHHHhcCCCeEEE
Confidence 997655433 5799999988742 0 0367888888776 78888
Q ss_pred EEcCCCCChhcHHHHHHHhc
Q 013515 379 YSTCSIHQVENEDVIKSVLP 398 (441)
Q Consensus 379 YsTCS~~~~ENe~vV~~~l~ 398 (441)
.++++. ++...+...++
T Consensus 140 ~~~~~~---~~~~~~~~~l~ 156 (204)
T 3e05_A 140 LNAVTL---DTLTKAVEFLE 156 (204)
T ss_dssp EEECBH---HHHHHHHHHHH
T ss_pred EEeccc---ccHHHHHHHHH
Confidence 876653 45555556664
No 32
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.50 E-value=4.3e-13 Score=123.24 Aligned_cols=137 Identities=18% Similarity=0.255 Sum_probs=105.5
Q ss_pred cccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 013515 224 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 302 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~ 302 (441)
..+..-..++...+++.++++|||+|||+|..+..++.. .++|+++|+++.+++.++++++.+|++ ++.++.+|+.
T Consensus 38 ~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 114 (204)
T 3njr_A 38 ITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP 114 (204)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh
Confidence 334455566777888999999999999999999999987 479999999999999999999999997 8999999998
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
+..... ..||.|++++.. . +. ++..+.+.++ ||.+++++
T Consensus 115 ~~~~~~---~~~D~v~~~~~~--------~----------------------------~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 115 AALADL---PLPEAVFIGGGG--------S----------------------------QA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp GGGTTS---CCCSEEEECSCC--------C----------------------------HH-HHHHHHHHSCTTCEEEEEE
T ss_pred hhcccC---CCCCEEEECCcc--------c----------------------------HH-HHHHHHHhcCCCcEEEEEe
Confidence 844332 569999987621 0 12 6777777666 79999988
Q ss_pred CCCCChhcHHHHHHHhchhcCCCeEEec
Q 013515 382 CSIHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 382 CS~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
|+ .++...+.+.++. .++++..
T Consensus 155 ~~---~~~~~~~~~~l~~---~g~~i~~ 176 (204)
T 3njr_A 155 VT---LESETLLTQLHAR---HGGQLLR 176 (204)
T ss_dssp CS---HHHHHHHHHHHHH---HCSEEEE
T ss_pred cC---cccHHHHHHHHHh---CCCcEEE
Confidence 86 3566666666643 2355533
No 33
>3r2d_A Protein NUSB, N utilization substance protein B; cross species NUSB-NUSE-RNA interaction; 2.20A {Aquifex aeolicus} PDB: 2jr0_A 3r2c_A* 4eya_A
Probab=99.48 E-value=2.5e-13 Score=118.53 Aligned_cols=116 Identities=11% Similarity=-0.003 Sum_probs=86.6
Q ss_pred cHHHHHHHHHHHHHHHccChhhH-HHHhhhhhhcC-CCccCHHHHHHHHHHHHhcHHHHHHHhhhhhcccc-ccc----c
Q 013515 31 AYFARREAAKVLRLVLRGDARRR-AVGSIKSLVYS-PSVKNKKATYALVCQTLKHLSIIKQVLDSASILNS-KWK----R 103 (441)
Q Consensus 31 ~~~~R~~A~~vL~~v~~~~~~~~-~~~~~~~~~~~-~~~~dr~~~~~Lv~GvlR~~~~Ld~il~~~~~l~~-~~~----~ 103 (441)
..++|+.|+++|++++.++.+.+ ++...... .. .+.+|++|+++|||||+|++..||++|.+ ++++ ++. .
T Consensus 5 R~~aR~~A~q~L~~~~~~~~~~~~~l~~~~~~-~~~~~~~dr~~~~~lv~gvl~~~~~lD~~i~~--~l~~w~~~rl~~~ 81 (149)
T 3r2d_A 5 RKGARDTAFLVLYRWDLRGENPGELFKEVVEE-KNIKNKDAYEYAKKLVDTAVRHIEEIDSIIEK--HLKGWSIDRLGYV 81 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HTCCCHHHHHHHHHHHHHHHHTHHHHHHHHHT--TC---CGGGSCHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHh-cccCCHHHHHHHHHHHHHHHHhHHHHHHHHHH--HhcCCCccccCHH
Confidence 34699999999999987555444 33332211 12 45679999999999999999999999997 5543 332 2
Q ss_pred hHHHHHHHHHHHHhcCCCCchHHHHHHHHHhhHH---HHHHHHHHHHHc
Q 013515 104 QEELVYILTYDILFGQEISLVGDAEKFLMLHKGA---IQLALAQLLVRN 149 (441)
Q Consensus 104 ~~~lL~l~~yql~f~~~ip~~~~i~~~v~~~k~~---~~~~l~~~~~~~ 149 (441)
++.+||+++||++|++++|.+++||++|+.+|.. -...|.|-+++.
T Consensus 82 ~r~iLrla~yEl~~~~~iP~~vaInEaVelaK~~~~~~~~~fVNgVLr~ 130 (149)
T 3r2d_A 82 ERNALRLGVAELIFLKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSA 130 (149)
T ss_dssp HHHHHHHHHHHHTTSCCSCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCeehHHHHHHHHHHhCCCCccccchHHhhH
Confidence 4889999999999998899999999999998752 124566655553
No 34
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.48 E-value=1.8e-13 Score=129.55 Aligned_cols=99 Identities=20% Similarity=0.318 Sum_probs=84.7
Q ss_pred CcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEec
Q 013515 221 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHG 299 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~ 299 (441)
+...+....+..+...+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.+ +++.++
T Consensus 73 ~~~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~ 152 (255)
T 3mb5_A 73 GPQIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK 152 (255)
T ss_dssp CSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS
T ss_pred ccccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3334445566677788899999999999999999999999987767899999999999999999999999876 999999
Q ss_pred cCCCCCCCCCCCCCccEEEEcCCC
Q 013515 300 DFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
|+.+..+. .+||.|++|+|+
T Consensus 153 d~~~~~~~----~~~D~v~~~~~~ 172 (255)
T 3mb5_A 153 DIYEGIEE----ENVDHVILDLPQ 172 (255)
T ss_dssp CGGGCCCC----CSEEEEEECSSC
T ss_pred chhhccCC----CCcCEEEECCCC
Confidence 99865322 579999999984
No 35
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.48 E-value=1e-13 Score=131.29 Aligned_cols=149 Identities=12% Similarity=0.199 Sum_probs=111.6
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLN 303 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~ 303 (441)
+++..+.++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+.+
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 44666677777767778999999999999999999998765789999999999999999999999985 79999999876
Q ss_pred CCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 304 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 304 ~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
..+.....++||.|++|+++.. ....+..+.++++ ||.|++..+
T Consensus 127 ~l~~~~~~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDADKPN-----------------------------------NPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HHHTCCSCCCCSEEEECSCGGG-----------------------------------HHHHHHHHHHTCCTTCEEEEECC
T ss_pred HHHhcCCCCCeEEEEECCchHH-----------------------------------HHHHHHHHHHhcCCCeEEEEeCC
Confidence 4332211248999999987321 0246777888887 789998877
Q ss_pred CCC--------ChhcHHHHHHHhchh-cCCCeEEe
Q 013515 383 SIH--------QVENEDVIKSVLPIA-MSFGFQLA 408 (441)
Q Consensus 383 S~~--------~~ENe~vV~~~l~~~-~~~~~~~~ 408 (441)
... ..++...+.+|++.. .++.|+..
T Consensus 172 ~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 206 (248)
T 3tfw_A 172 VRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTAT 206 (248)
T ss_dssp SGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CcCCcccCccccchHHHHHHHHHHHHhhCCCEEEE
Confidence 655 333444556665432 35567653
No 36
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.47 E-value=2.1e-13 Score=122.61 Aligned_cols=142 Identities=18% Similarity=0.145 Sum_probs=97.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+.+|++|||+|||+|..+..++.. .++|+|+|+++.+++.++++++..|++++++++.|+..+....+ ++||.|+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~--~~fD~v~ 94 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVR--EPIRAAI 94 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCC--SCEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhcc--CCcCEEE
Confidence 468999999999999999999886 47999999999999999999999999899999988877542221 6799999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC---hhcHHHHH
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ---VENEDVIK 394 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~---~ENe~vV~ 394 (441)
++++.-..+ ...+......+...|..+.+.++ ||.++.+.++-++ +|.+. +.
T Consensus 95 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~~ 150 (185)
T 3mti_A 95 FNLGYLPSA-----------------------DKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDA-VL 150 (185)
T ss_dssp EEEC----------------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHH-HH
T ss_pred EeCCCCCCc-----------------------chhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHH-HH
Confidence 986531110 11122233445677888888777 7877776665443 34443 44
Q ss_pred HHhchhcCCCeEEec
Q 013515 395 SVLPIAMSFGFQLAT 409 (441)
Q Consensus 395 ~~l~~~~~~~~~~~~ 409 (441)
.+++.....+|.+..
T Consensus 151 ~~~~~l~~~~~~~~~ 165 (185)
T 3mti_A 151 EYVIGLDQRVFTAML 165 (185)
T ss_dssp HHHHHSCTTTEEEEE
T ss_pred HHHHhCCCceEEEEE
Confidence 555444455576543
No 37
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=1.5e-13 Score=132.16 Aligned_cols=125 Identities=19% Similarity=0.162 Sum_probs=96.5
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|..|.........+..+.+|++|||+|||+|..+..++...+ .++|+++|+++.+++.+++|++.+|++++.++++|+.
T Consensus 101 f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~ 179 (272)
T 3a27_A 101 MWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNR 179 (272)
T ss_dssp CCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGG
T ss_pred EECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChH
Confidence 344443333333344567899999999999999999998853 4799999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcC
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 382 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTC 382 (441)
++ +.. .+||+|++|||. +. .+++..+++.+++|.++|.+|
T Consensus 180 ~~-~~~---~~~D~Vi~d~p~---~~---------------------------------~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 180 DV-ELK---DVADRVIMGYVH---KT---------------------------------HKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp GC-CCT---TCEEEEEECCCS---SG---------------------------------GGGHHHHHHHEEEEEEEEEEE
T ss_pred Hc-Ccc---CCceEEEECCcc---cH---------------------------------HHHHHHHHHHcCCCCEEEEEE
Confidence 87 332 679999999995 11 134666777777666667778
Q ss_pred CCCChh
Q 013515 383 SIHQVE 388 (441)
Q Consensus 383 S~~~~E 388 (441)
.....+
T Consensus 220 ~~~~~~ 225 (272)
T 3a27_A 220 TVAEKI 225 (272)
T ss_dssp EEEGGG
T ss_pred cCcccc
Confidence 766554
No 38
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.46 E-value=1.1e-13 Score=133.05 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=78.5
Q ss_pred cccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEecc
Q 013515 222 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGD 300 (441)
Q Consensus 222 ~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D 300 (441)
+...+......++..+ ++|++|||+|||+|++++++|.. +..+|+|+|+++.+++.+++|++.+|+. +|+++++|
T Consensus 108 f~~~~~~er~ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D 183 (278)
T 3k6r_A 108 FSPANVKERVRMAKVA--KPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD 183 (278)
T ss_dssp CCGGGHHHHHHHHHHC--CTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred EcCCcHHHHHHHHHhc--CCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCc
Confidence 3333433444444444 67999999999999999999876 3469999999999999999999999995 59999999
Q ss_pred CCCCCCCCCCCCCccEEEEcCCCCC
Q 013515 301 FLNLDPKDPAYSEVRAILLDPSCSG 325 (441)
Q Consensus 301 ~~~~~~~~~~~~~fD~Il~DpPCSg 325 (441)
+.++... ..||+|++|+|+++
T Consensus 184 ~~~~~~~----~~~D~Vi~~~p~~~ 204 (278)
T 3k6r_A 184 NRDFPGE----NIADRILMGYVVRT 204 (278)
T ss_dssp TTTCCCC----SCEEEEEECCCSSG
T ss_pred HHHhccc----cCCCEEEECCCCcH
Confidence 9987654 67999999999754
No 39
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.45 E-value=1.5e-12 Score=121.11 Aligned_cols=148 Identities=13% Similarity=0.091 Sum_probs=97.9
Q ss_pred CCCCCCEEEEEcCC-CchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 013515 238 APKPGWKVLDACSA-PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 238 ~~~~g~~VLDl~ag-~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
.+++|.+|||+||| +|..+..++... ..+|+++|+++.+++.++++++.+|+ +++++++|+..+..... ++||.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~--~~fD~ 126 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVE--GTFDV 126 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCC--SCEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhccc--CceeE
Confidence 35689999999999 999999999875 47999999999999999999999998 89999999765443221 68999
Q ss_pred EEEcCCCCCCcccccc-cCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHH
Q 013515 317 ILLDPSCSGSGTAAER-LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIK 394 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~-pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~ 394 (441)
|++|||+...+..... |...+.. ... -......++..+.++++ ||.+++.+++ . .++...+.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~----------~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~-~~~~~~~~ 190 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGG----------GKY----GEEFSVKLLEEAFDHLNPGGKVALYLPD-K-EKLLNVIK 190 (230)
T ss_dssp EEECCCCC---------------C----------CSS----SCHHHHHHHHHHGGGEEEEEEEEEEEES-C-HHHHHHHH
T ss_pred EEECCCCcCCccccccChhhhhcc----------Ccc----chHHHHHHHHHHHHHhCCCeEEEEEecc-c-HhHHHHHH
Confidence 9999998765532110 0000000 000 00122678999999887 6777775433 2 23334444
Q ss_pred HHhchhcCCCeEEec
Q 013515 395 SVLPIAMSFGFQLAT 409 (441)
Q Consensus 395 ~~l~~~~~~~~~~~~ 409 (441)
+.++ ..+|++..
T Consensus 191 ~~l~---~~g~~~~~ 202 (230)
T 3evz_A 191 ERGI---KLGYSVKD 202 (230)
T ss_dssp HHHH---HTTCEEEE
T ss_pred HHHH---HcCCceEE
Confidence 4443 34665543
No 40
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.45 E-value=6.4e-13 Score=127.71 Aligned_cols=144 Identities=17% Similarity=0.133 Sum_probs=107.4
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDP 306 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~ 306 (441)
.....++..+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.+|+ +++.+..+|+.+..+
T Consensus 99 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 99 KDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 3445667788899999999999999999999999876668999999999999999999999998 689999999987622
Q ss_pred CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 307 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 307 ~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
. ++||+|++|+|+. ..+|..+.+.++ +|.+++.+++.
T Consensus 179 ~----~~~D~V~~~~~~~-------------------------------------~~~l~~~~~~L~pgG~l~~~~~~~- 216 (277)
T 1o54_A 179 E----KDVDALFLDVPDP-------------------------------------WNYIDKCWEALKGGGRFATVCPTT- 216 (277)
T ss_dssp C----CSEEEEEECCSCG-------------------------------------GGTHHHHHHHEEEEEEEEEEESSH-
T ss_pred C----CccCEEEECCcCH-------------------------------------HHHHHHHHHHcCCCCEEEEEeCCH-
Confidence 1 5799999999842 134666666666 68877776653
Q ss_pred ChhcHHHHHHHhchhcCCCeEEecCCCCCCCcc
Q 013515 386 QVENEDVIKSVLPIAMSFGFQLATPFPNGTAEA 418 (441)
Q Consensus 386 ~~ENe~vV~~~l~~~~~~~~~~~~~~~~~~~~~ 418 (441)
+.-..+.+.| ...+|..+.....+.+..
T Consensus 217 --~~~~~~~~~l---~~~gf~~~~~~~~~~~~~ 244 (277)
T 1o54_A 217 --NQVQETLKKL---QELPFIRIEVWESLFRPY 244 (277)
T ss_dssp --HHHHHHHHHH---HHSSEEEEEEECCCCCCE
T ss_pred --HHHHHHHHHH---HHCCCceeEEEEEeeeee
Confidence 1212222333 236787766555555543
No 41
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.44 E-value=6.3e-13 Score=125.72 Aligned_cols=142 Identities=19% Similarity=0.207 Sum_probs=106.3
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLN 303 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~-g~~~v~~~~~D~~~ 303 (441)
+.......+...+++.+|++|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. |.+++.+..+|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE 159 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh
Confidence 33334456777788899999999999999999999998766689999999999999999999998 87889999999988
Q ss_pred CCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 304 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 304 ~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
.+... ++||.|++|+|.. ..+|.++.++++ +|.++.++.
T Consensus 160 ~~~~~---~~~D~v~~~~~~~-------------------------------------~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 160 AELEE---AAYDGVALDLMEP-------------------------------------WKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCCCT---TCEEEEEEESSCG-------------------------------------GGGHHHHHHHEEEEEEEEEEES
T ss_pred cCCCC---CCcCEEEECCcCH-------------------------------------HHHHHHHHHhCCCCCEEEEEeC
Confidence 74332 5799999998731 134666777666 677666554
Q ss_pred CCCChhcHHHHHHHhchhcCCCeEEecCCC
Q 013515 383 SIHQVENEDVIKSVLPIAMSFGFQLATPFP 412 (441)
Q Consensus 383 S~~~~ENe~vV~~~l~~~~~~~~~~~~~~~ 412 (441)
+. ..+.++++.....+|..+....
T Consensus 200 ~~------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 200 NI------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp CH------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred CH------HHHHHHHHHHHHCCCceEEEEE
Confidence 32 2333433333456787655444
No 42
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.43 E-value=3.4e-13 Score=135.29 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=70.9
Q ss_pred HHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC----
Q 013515 235 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA---- 310 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~---- 310 (441)
..+++. |++|||+|||+|++++.+|.. ..+|+++|+++.+++.+++|++.+|++|++++++|+.++......
T Consensus 208 ~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~ 283 (369)
T 3bt7_A 208 DVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREF 283 (369)
T ss_dssp HHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCC
T ss_pred HHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccc
Confidence 344443 689999999999999988864 369999999999999999999999999999999998765321100
Q ss_pred ---------CCCccEEEEcCCCCC
Q 013515 311 ---------YSEVRAILLDPSCSG 325 (441)
Q Consensus 311 ---------~~~fD~Il~DpPCSg 325 (441)
..+||+|++|||+.|
T Consensus 284 ~~l~~~~~~~~~fD~Vv~dPPr~g 307 (369)
T 3bt7_A 284 NRLQGIDLKSYQCETIFVDPPRSG 307 (369)
T ss_dssp TTGGGSCGGGCCEEEEEECCCTTC
T ss_pred ccccccccccCCCCEEEECcCccc
Confidence 027999999999875
No 43
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.43 E-value=6.5e-13 Score=123.26 Aligned_cols=147 Identities=14% Similarity=0.170 Sum_probs=108.5
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDF 301 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~ 301 (441)
..+++..+.++..++...++.+|||+|||+|..+.++++.+++.++|+++|+++.+++.++++++..|+. +|+++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 5677778888888887778899999999999999999997765689999999999999999999999985 699999998
Q ss_pred CCCCCCCC---CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEE
Q 013515 302 LNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERV 377 (441)
Q Consensus 302 ~~~~~~~~---~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~l 377 (441)
.+..+... ..++||.|++|+++... ....+++..+ ++++ ||.|
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~--------------------------------~~~~~~~~~~-~~LkpgG~l 166 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRY--------------------------------LPDTLLLEKC-GLLRKGTVL 166 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGH--------------------------------HHHHHHHHHT-TCCCTTCEE
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccc--------------------------------hHHHHHHHhc-cccCCCeEE
Confidence 65432211 11579999999864210 0112455555 7776 7899
Q ss_pred EEEcCCCCChhcHHHHHHHhchhcCCCeEE
Q 013515 378 VYSTCSIHQVENEDVIKSVLPIAMSFGFQL 407 (441)
Q Consensus 378 vYsTCS~~~~ENe~vV~~~l~~~~~~~~~~ 407 (441)
|+..|.... .... .+++. .++.|+.
T Consensus 167 v~~~~~~~~--~~~~-~~~l~--~~~~~~~ 191 (221)
T 3u81_A 167 LADNVIVPG--TPDF-LAYVR--GSSSFEC 191 (221)
T ss_dssp EESCCCCCC--CHHH-HHHHH--HCTTEEE
T ss_pred EEeCCCCcc--hHHH-HHHHh--hCCCceE
Confidence 998888432 2333 34443 2456654
No 44
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.42 E-value=1.2e-12 Score=134.03 Aligned_cols=91 Identities=27% Similarity=0.352 Sum_probs=76.4
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-CC
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-AY 311 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-~~ 311 (441)
+...+++.++++|||+|||+|..+..++.. ..+|+|+|+++.+++.+++|++.+|++|++++++|+.+.....+ ..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~ 354 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAK 354 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGT
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhc
Confidence 334566778999999999999999999876 47999999999999999999999999999999999987443210 11
Q ss_pred CCccEEEEcCCCCCC
Q 013515 312 SEVRAILLDPSCSGS 326 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~ 326 (441)
++||.|++|||++|.
T Consensus 355 ~~fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 355 NGFDKVLLDPARAGA 369 (433)
T ss_dssp TCCSEEEECCCTTCC
T ss_pred CCCCEEEECCCCccH
Confidence 479999999998764
No 45
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=5.3e-13 Score=127.37 Aligned_cols=136 Identities=17% Similarity=0.225 Sum_probs=94.6
Q ss_pred hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHH---hCCC-cEEEEeccCCCC
Q 013515 229 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL---SGAA-NIEVLHGDFLNL 304 (441)
Q Consensus 229 ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~---~g~~-~v~~~~~D~~~~ 304 (441)
.+.+++.++...++.+|||+|||+|..++.++.... ..+|+++|+++.+++.+++|++. +|+. ++.++++|+.++
T Consensus 24 D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 477888888888899999999999999999998853 47999999999999999999998 8875 699999999887
Q ss_pred CC-----CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEE
Q 013515 305 DP-----KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVV 378 (441)
Q Consensus 305 ~~-----~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lv 378 (441)
.. ..+ .++||.|++|||+...+ -...++... .............++..+.++++ +|.++
T Consensus 103 ~~~~~~~~~~-~~~fD~Vv~nPPy~~~~-~~~~~~~~~-------------~~a~~~~~~~~~~~l~~~~~~LkpgG~l~ 167 (260)
T 2ozv_A 103 AKARVEAGLP-DEHFHHVIMNPPYNDAG-DRRTPDALK-------------AEAHAMTEGLFEDWIRTASAIMVSGGQLS 167 (260)
T ss_dssp HHHHHHTTCC-TTCEEEEEECCCC-----------------------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhhhhccC-CCCcCEEEECCCCcCCC-CCCCcCHHH-------------HHHhhcCcCCHHHHHHHHHHHcCCCCEEE
Confidence 21 010 26799999999997664 112222100 00000111124578888888887 67766
Q ss_pred EE
Q 013515 379 YS 380 (441)
Q Consensus 379 Ys 380 (441)
..
T Consensus 168 ~~ 169 (260)
T 2ozv_A 168 LI 169 (260)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 46
>1eyv_A NUSB protein, N-utilizing substance protein B homolog; helical bundle, structural genomics, PSI, protein structure initiative; 1.60A {Mycobacterium tuberculosis} SCOP: a.79.1.1
Probab=99.39 E-value=2.6e-12 Score=112.89 Aligned_cols=120 Identities=12% Similarity=0.100 Sum_probs=86.4
Q ss_pred cHHHHHHHHHHHHHHHccC-hhhHHHHhhhhhh--cCCCccCHHHHHHHHHHHHhcHHHHHHHhhhhhcccc-ccc----
Q 013515 31 AYFARREAAKVLRLVLRGD-ARRRAVGSIKSLV--YSPSVKNKKATYALVCQTLKHLSIIKQVLDSASILNS-KWK---- 102 (441)
Q Consensus 31 ~~~~R~~A~~vL~~v~~~~-~~~~~~~~~~~~~--~~~~~~dr~~~~~Lv~GvlR~~~~Ld~il~~~~~l~~-~~~---- 102 (441)
...+|+.|+++|++++.++ ...+++....... ......+++|+++|||||+|++..||++|.+ ++++ +++
T Consensus 10 R~~aR~~Alq~L~~~~~~~~~~~~~l~~~~~l~~~d~~~~~~~~~~~~lv~gvl~~~~~lD~~i~~--~l~~w~l~rl~~ 87 (156)
T 1eyv_A 10 RHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITA--HLRGWTLDRLPA 87 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHTHHHHHHHHHT--TSTTCCGGGSCH
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHhHHHHHHHHHH--HhcCCChhhCCH
Confidence 3459999999999997754 3333332221110 1112356899999999999999999999997 5543 322
Q ss_pred chHHHHHHHHHHHHhcCCCCchHHHHHHHHHhhHHH---HHHHHHHHHHcccc
Q 013515 103 RQEELVYILTYDILFGQEISLVGDAEKFLMLHKGAI---QLALAQLLVRNKVK 152 (441)
Q Consensus 103 ~~~~lL~l~~yql~f~~~ip~~~~i~~~v~~~k~~~---~~~l~~~~~~~~~~ 152 (441)
.++.+||+++||++|++++|.+++|||+|+.+|... ...|.|-++++...
T Consensus 88 ~~r~iLrla~yel~~~~~iP~~v~InEaVelak~~~~~~~~~fVNgVLr~i~r 140 (156)
T 1eyv_A 88 VDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVML 140 (156)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHhCCCccccchHHHHHHHHH
Confidence 248899999999999988999999999999987531 24577776665443
No 47
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.39 E-value=2.4e-12 Score=124.50 Aligned_cols=99 Identities=19% Similarity=0.238 Sum_probs=79.4
Q ss_pred ccccchhhHHHHHHh---CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEe
Q 013515 223 VFLQGKASSMVAAAL---APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLH 298 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l---~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~ 298 (441)
++.+.....++..++ ...++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.+++|++.+|+.+ +++++
T Consensus 102 lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~ 179 (284)
T 1nv8_A 102 FVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRK 179 (284)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred eecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 334444444443333 2346789999999999999999988 45899999999999999999999999975 99999
Q ss_pred ccCCCCCCCCCCCCCc---cEEEEcCCCCCCcc
Q 013515 299 GDFLNLDPKDPAYSEV---RAILLDPSCSGSGT 328 (441)
Q Consensus 299 ~D~~~~~~~~~~~~~f---D~Il~DpPCSg~G~ 328 (441)
+|+.+... ++| |.|++||||.+.+.
T Consensus 180 ~D~~~~~~-----~~f~~~D~IvsnPPyi~~~~ 207 (284)
T 1nv8_A 180 GEFLEPFK-----EKFASIEMILSNPPYVKSSA 207 (284)
T ss_dssp SSTTGGGG-----GGTTTCCEEEECCCCBCGGG
T ss_pred Ccchhhcc-----cccCCCCEEEEcCCCCCccc
Confidence 99987432 357 99999999998876
No 48
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=4.4e-12 Score=115.98 Aligned_cols=124 Identities=22% Similarity=0.313 Sum_probs=94.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
.+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.+|+ ++.++++|+.+++ .+||.|
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------~~~D~v 116 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN------SRVDIV 116 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC------CCCSEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC------CCCCEE
Confidence 4667999999999999999999876 335899999999999999999999988 8999999998864 469999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCChhcHHHHHHHh
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 397 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTCS~~~~ENe~vV~~~l 397 (441)
++|||+.... +.. ...+|..+.+.+ | .+|++|. .+.++.+.+.+++
T Consensus 117 ~~~~p~~~~~---~~~---------------------------~~~~l~~~~~~l--~-~~~~~~~-~~~~~~~~~~~~l 162 (207)
T 1wy7_A 117 IMNPPFGSQR---KHA---------------------------DRPFLLKAFEIS--D-VVYSIHL-AKPEVRRFIEKFS 162 (207)
T ss_dssp EECCCCSSSS---TTT---------------------------THHHHHHHHHHC--S-EEEEEEE-CCHHHHHHHHHHH
T ss_pred EEcCCCcccc---CCc---------------------------hHHHHHHHHHhc--C-cEEEEEe-CCcCCHHHHHHHH
Confidence 9999974321 100 124566666655 3 3778883 4567777777777
Q ss_pred chhcCCCeEE
Q 013515 398 PIAMSFGFQL 407 (441)
Q Consensus 398 ~~~~~~~~~~ 407 (441)
+ ..+|++
T Consensus 163 ~---~~g~~~ 169 (207)
T 1wy7_A 163 W---EHGFVV 169 (207)
T ss_dssp H---HTTEEE
T ss_pred H---HCCCeE
Confidence 4 245554
No 49
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.38 E-value=5.7e-13 Score=123.48 Aligned_cols=148 Identities=13% Similarity=0.143 Sum_probs=107.8
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLN 303 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~ 303 (441)
+++..+.++..++...++.+|||+|||+|..+.++++.+++.++|+++|+++.+++.+++++++.|+. +++++++|+.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 45666777777767778999999999999999999998765689999999999999999999999985 49999999876
Q ss_pred CCCCC--CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEE
Q 013515 304 LDPKD--PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYS 380 (441)
Q Consensus 304 ~~~~~--~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYs 380 (441)
..+.. ...++||.|++|++++. ...++..+.++++ ||.++..
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~~-----------------------------------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQN-----------------------------------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGGG-----------------------------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred HHHHHHhcCCCCcCEEEEcCCcHH-----------------------------------HHHHHHHHHHhcCCCcEEEEe
Confidence 43211 00146999999988431 1356778888887 7888776
Q ss_pred cCCCC--------ChhcHHHHHHHhchh-cCCCeEE
Q 013515 381 TCSIH--------QVENEDVIKSVLPIA-MSFGFQL 407 (441)
Q Consensus 381 TCS~~--------~~ENe~vV~~~l~~~-~~~~~~~ 407 (441)
.+... ..++...+.+|++.. .+..|+.
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 202 (223)
T 3duw_A 167 NVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSA 202 (223)
T ss_dssp SCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEE
T ss_pred CCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEE
Confidence 55543 233344555665432 2444543
No 50
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.38 E-value=9.5e-13 Score=120.56 Aligned_cols=80 Identities=19% Similarity=0.251 Sum_probs=68.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEeccCCCCCCCCCCCCC-ccEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA--ANIEVLHGDFLNLDPKDPAYSE-VRAI 317 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~--~~v~~~~~D~~~~~~~~~~~~~-fD~I 317 (441)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.+|+ ++++++++|+.++..... .++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ-NQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC-SSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc-cCCCCCEE
Confidence 6889999999999999987765 236999999999999999999999998 789999999987654311 157 9999
Q ss_pred EEcCCC
Q 013515 318 LLDPSC 323 (441)
Q Consensus 318 l~DpPC 323 (441)
++|||+
T Consensus 130 ~~~~~~ 135 (201)
T 2ift_A 130 FLDPPF 135 (201)
T ss_dssp EECCCS
T ss_pred EECCCC
Confidence 999994
No 51
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.38 E-value=1.3e-13 Score=130.26 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=111.1
Q ss_pred CcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEec
Q 013515 221 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHG 299 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~ 299 (441)
+.+.++.....++..++...++.+|||+|||+|..|..++..+++.++|+++|+++.+++.+++++++.|+. +|+++.+
T Consensus 40 ~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g 119 (242)
T 3r3h_A 40 ANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG 119 (242)
T ss_dssp GGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES
T ss_pred CCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence 345677778888888877778899999999999999999998866789999999999999999999999984 8999999
Q ss_pred cCCCCCCCCC---CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-Cc
Q 013515 300 DFLNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VE 375 (441)
Q Consensus 300 D~~~~~~~~~---~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G 375 (441)
|+.+..+... ..++||.|++|++... ....++.+.++++ ||
T Consensus 120 da~~~l~~~~~~~~~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG 164 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEHQFDFIFIDADKTN-----------------------------------YLNYYELALKLVTPKG 164 (242)
T ss_dssp CHHHHHHHHHHHHCSSCEEEEEEESCGGG-----------------------------------HHHHHHHHHHHEEEEE
T ss_pred CHHHHHHHHhhccCCCCEeEEEEcCChHH-----------------------------------hHHHHHHHHHhcCCCe
Confidence 9976543210 0167999999987210 0245777778777 78
Q ss_pred EEEEEcCCC-----CChhc---HHHHHHHhchh-cCCCeEE
Q 013515 376 RVVYSTCSI-----HQVEN---EDVIKSVLPIA-MSFGFQL 407 (441)
Q Consensus 376 ~lvYsTCS~-----~~~EN---e~vV~~~l~~~-~~~~~~~ 407 (441)
.||+..+.. .+..+ ...+.+|.+.. .++.|+.
T Consensus 165 ~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 205 (242)
T 3r3h_A 165 LIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFV 205 (242)
T ss_dssp EEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEE
T ss_pred EEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEE
Confidence 887654432 23332 33455555432 3455654
No 52
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.38 E-value=6.4e-13 Score=124.19 Aligned_cols=130 Identities=16% Similarity=0.200 Sum_probs=106.3
Q ss_pred hcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEE
Q 013515 219 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVL 297 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~ 297 (441)
..|..++|...+.++..++.+.++.+|||+|||+|..+..++..++ .++|+++|+++.+++.++++++..|+. +|.++
T Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 110 (233)
T 2gpy_A 32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELL 110 (233)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4577788988899999888888899999999999999999999864 589999999999999999999999984 69999
Q ss_pred eccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcE
Q 013515 298 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VER 376 (441)
Q Consensus 298 ~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~ 376 (441)
.+|+....+.....+.||+|++|+||+. +..++..+.++++ ||.
T Consensus 111 ~~d~~~~~~~~~~~~~fD~I~~~~~~~~-----------------------------------~~~~l~~~~~~L~pgG~ 155 (233)
T 2gpy_A 111 FGDALQLGEKLELYPLFDVLFIDAAKGQ-----------------------------------YRRFFDMYSPMVRPGGL 155 (233)
T ss_dssp CSCGGGSHHHHTTSCCEEEEEEEGGGSC-----------------------------------HHHHHHHHGGGEEEEEE
T ss_pred ECCHHHHHHhcccCCCccEEEECCCHHH-----------------------------------HHHHHHHHHHHcCCCeE
Confidence 9999875321100157999999998631 1367888888887 789
Q ss_pred EEEEcCCC
Q 013515 377 VVYSTCSI 384 (441)
Q Consensus 377 lvYsTCS~ 384 (441)
++++++..
T Consensus 156 lv~~~~~~ 163 (233)
T 2gpy_A 156 ILSDNVLF 163 (233)
T ss_dssp EEEETTTC
T ss_pred EEEEcCCc
Confidence 99986544
No 53
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.37 E-value=2.9e-12 Score=122.93 Aligned_cols=96 Identities=19% Similarity=0.280 Sum_probs=82.2
Q ss_pred cccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh-C--CCcEEEEecc
Q 013515 224 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-G--AANIEVLHGD 300 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~-g--~~~v~~~~~D 300 (441)
.++......+...+++.+|++|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. | .+++.++++|
T Consensus 82 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 82 VIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred eecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 344445567777888999999999999999999999998766789999999999999999999998 7 6789999999
Q ss_pred CCCCCCCCCCCCCccEEEEcCC
Q 013515 301 FLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 301 ~~~~~~~~~~~~~fD~Il~DpP 322 (441)
+.+.+... ++||.|++|+|
T Consensus 162 ~~~~~~~~---~~~D~v~~~~~ 180 (280)
T 1i9g_A 162 LADSELPD---GSVDRAVLDML 180 (280)
T ss_dssp GGGCCCCT---TCEEEEEEESS
T ss_pred hHhcCCCC---CceeEEEECCc
Confidence 98875332 67999999877
No 54
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.36 E-value=1.7e-12 Score=118.19 Aligned_cols=149 Identities=17% Similarity=0.176 Sum_probs=99.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC------C--C
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD------P--A 310 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~------~--~ 310 (441)
+++|.+|||+|||||++|..+++. .++|+|+|+++. ....+++++++|+.+..... . .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~-----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM-----------EEIAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC-----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc-----------ccCCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 578999999999999999999887 589999999974 13467899999998754110 0 0
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhc
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVEN 389 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~EN 389 (441)
.++||+|++|+++..+|.. ..+......++..+|..|.++|+ ||.+| |.++..++
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~---------------------~~d~~~~~~l~~~~l~~a~~~LkpGG~lv---~k~~~~~~ 144 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIP---------------------SRDHAVSYQIGQRVMEIAVRYLRNGGNVL---LKQFQGDM 144 (191)
T ss_dssp CSSEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEEEEEEE---EEEECSTH
T ss_pred CCcceEEecCCCcCCCCCc---------------------ccCHHHHHHHHHHHHHHHHHHccCCCEEE---EEEcCCCC
Confidence 0379999999998877742 12233455678889999999887 68877 34455566
Q ss_pred HHHHHHHhchhcCCCeEEecC-CCCCCCccccccccceeee
Q 013515 390 EDVIKSVLPIAMSFGFQLATP-FPNGTAEASQFLKALSIYF 429 (441)
Q Consensus 390 e~vV~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f 429 (441)
...+.+.++. .|..+.. .|...+..+.-..-++..|
T Consensus 145 ~~~~~~~l~~----~F~~v~~~kP~asR~~s~E~y~v~~~~ 181 (191)
T 3dou_A 145 TNDFIAIWRK----NFSSYKISKPPASRGSSSEIYIMFFGF 181 (191)
T ss_dssp HHHHHHHHGG----GEEEEEEECC------CCEEEEEEEEE
T ss_pred HHHHHHHHHH----hcCEEEEECCCCccCCCceEEEEEeee
Confidence 6666666642 3654443 4666666655433444444
No 55
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.35 E-value=1.8e-12 Score=130.20 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=105.7
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~ 308 (441)
+..+..++ ..+|.+|||+|||+|+.+..++... ..++|+|+|+++.+++.+++|++..|+ ++|++.++|+.+++..+
T Consensus 207 a~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~ 284 (373)
T 3tm4_A 207 ANAMIELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYV 284 (373)
T ss_dssp HHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTC
T ss_pred HHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCccc
Confidence 33444455 7889999999999999999998864 335899999999999999999999998 68999999999987543
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCChh
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 388 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTCS~~~~E 388 (441)
++||.|++|||..- + ......+..++.+++..+.+.+ +|.++|.||+
T Consensus 285 ---~~fD~Ii~npPyg~------r------------------~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~~----- 331 (373)
T 3tm4_A 285 ---DSVDFAISNLPYGL------K------------------IGKKSMIPDLYMKFFNELAKVL-EKRGVFITTE----- 331 (373)
T ss_dssp ---SCEEEEEEECCCC------------------------------CCHHHHHHHHHHHHHHHE-EEEEEEEESC-----
T ss_pred ---CCcCEEEECCCCCc------c------------------cCcchhHHHHHHHHHHHHHHHc-CCeEEEEECC-----
Confidence 67999999999631 0 0011124455778888887766 7888898884
Q ss_pred cHHHHHHHhchhcCCCeEEec
Q 013515 389 NEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 389 Ne~vV~~~l~~~~~~~~~~~~ 409 (441)
...+.+.+. ..+|+...
T Consensus 332 -~~~~~~~~~---~~G~~~~~ 348 (373)
T 3tm4_A 332 -KKAIEEAIA---ENGFEIIH 348 (373)
T ss_dssp -HHHHHHHHH---HTTEEEEE
T ss_pred -HHHHHHHHH---HcCCEEEE
Confidence 444555553 34677654
No 56
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.34 E-value=3e-12 Score=126.74 Aligned_cols=100 Identities=20% Similarity=0.206 Sum_probs=85.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
.+|++|||+|||+|+.++. +. +..+|+++|+++.+++.+++|++.+|+ ++++++++|+.++. .+||.|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------CCCcEEE
Confidence 5799999999999999998 76 357999999999999999999999998 58999999998765 5699999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
+|||.++. .++..+.++++ +|.++|++|+..
T Consensus 264 ~dpP~~~~------------------------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 264 MNLPKFAH------------------------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ECCTTTGG------------------------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ECCcHhHH------------------------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 99996532 34666677665 789999999987
No 57
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.34 E-value=1.7e-12 Score=120.89 Aligned_cols=125 Identities=10% Similarity=0.064 Sum_probs=95.2
Q ss_pred cccchhhHHHHHHh---CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEe
Q 013515 224 FLQGKASSMVAAAL---APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA--NIEVLH 298 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l---~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~--~v~~~~ 298 (441)
.++.....++..++ .++++.+|||+|||+|..|..++..+++.++|+++|+++.+++.+++++++.|+. +|++++
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 34444444444443 3445569999999999999999998876789999999999999999999999986 799999
Q ss_pred ccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEE
Q 013515 299 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERV 377 (441)
Q Consensus 299 ~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~l 377 (441)
+|+.+..+... .++||.|++|++... ....++.+.++++ ||.|
T Consensus 116 gda~~~l~~~~-~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG~l 159 (221)
T 3dr5_A 116 SRPLDVMSRLA-NDSYQLVFGQVSPMD-----------------------------------LKALVDAAWPLLRRGGAL 159 (221)
T ss_dssp SCHHHHGGGSC-TTCEEEEEECCCTTT-----------------------------------HHHHHHHHHHHEEEEEEE
T ss_pred cCHHHHHHHhc-CCCcCeEEEcCcHHH-----------------------------------HHHHHHHHHHHcCCCcEE
Confidence 99877643321 168999999976310 0245777778777 7888
Q ss_pred EEEcCCC
Q 013515 378 VYSTCSI 384 (441)
Q Consensus 378 vYsTCS~ 384 (441)
+...+..
T Consensus 160 v~dn~~~ 166 (221)
T 3dr5_A 160 VLADALL 166 (221)
T ss_dssp EETTTTG
T ss_pred EEeCCCC
Confidence 8877665
No 58
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.34 E-value=3.9e-12 Score=114.86 Aligned_cols=82 Identities=18% Similarity=0.267 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.+|.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.+|+++++++++|+.++....+ .++||.|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT-TSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC-SSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc-CCCccEEEE
Confidence 57899999999999999988764 456899999999999999999999999899999999987653211 168999999
Q ss_pred cCCCC
Q 013515 320 DPSCS 324 (441)
Q Consensus 320 DpPCS 324 (441)
|||..
T Consensus 120 ~~p~~ 124 (189)
T 3p9n_A 120 DPPYN 124 (189)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 99953
No 59
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.34 E-value=3.8e-13 Score=123.07 Aligned_cols=182 Identities=12% Similarity=0.078 Sum_probs=90.1
Q ss_pred CcccccchhhHHHHHHh---CC-CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEE
Q 013515 221 GCVFLQGKASSMVAAAL---AP-KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV 296 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l---~~-~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~ 296 (441)
|.++.+..+..++..++ .. .++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++..|. ++++
T Consensus 6 ~~~~p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~ 83 (215)
T 4dzr_A 6 DCLIPRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDW 83 (215)
T ss_dssp GGGSCCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------C
T ss_pred CccCCCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEE
Confidence 34444444444444333 33 678999999999999999999985 347999999999999999999999888 8899
Q ss_pred EeccCCCCCCC-CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-C
Q 013515 297 LHGDFLNLDPK-DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-V 374 (441)
Q Consensus 297 ~~~D~~~~~~~-~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~ 374 (441)
+++|+.+.... ....++||.|++|||+...+.+..-++.. ..+... .....-..-......++..+.++++ |
T Consensus 84 ~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 84 AAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSV-RDYEPR-----LALDGGEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp CHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred EEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhh-hccCcc-----ccccCCCcHHHHHHHHHHHHHHHhcCC
Confidence 99998773221 00016799999999997766543211100 000000 0000000011223678888888887 7
Q ss_pred cEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEecCCCCC
Q 013515 375 ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNG 414 (441)
Q Consensus 375 G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~~~~~~~ 414 (441)
|.+++.++. ..+...+..++... ..+|..+...+..
T Consensus 158 G~l~~~~~~---~~~~~~~~~~l~~~-~~gf~~~~~~~~~ 193 (215)
T 4dzr_A 158 RAGVFLEVG---HNQADEVARLFAPW-RERGFRVRKVKDL 193 (215)
T ss_dssp SEEEEEECT---TSCHHHHHHHTGGG-GGGTEECCEEECT
T ss_pred CeEEEEEEC---CccHHHHHHHHHHh-hcCCceEEEEEec
Confidence 884555554 33445556666410 2356554444433
No 60
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.32 E-value=1.7e-12 Score=122.03 Aligned_cols=128 Identities=14% Similarity=0.074 Sum_probs=100.2
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDF 301 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~ 301 (441)
..++.....++..++...++.+|||+|||+|+.+..++..+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4455666677777666677889999999999999999998875689999999999999999999999985 699999998
Q ss_pred CCCCCCC--C--CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcE
Q 013515 302 LNLDPKD--P--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VER 376 (441)
Q Consensus 302 ~~~~~~~--~--~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~ 376 (441)
.+..+.. . ..++||.|++|+++.. +..+++.+.++++ ||.
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~-----------------------------------~~~~l~~~~~~L~pGG~ 176 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPN-----------------------------------YIKYHERLMKLVKVGGI 176 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGG-----------------------------------HHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHH-----------------------------------HHHHHHHHHHhcCCCeE
Confidence 7643211 0 0167999999977421 1356777777777 789
Q ss_pred EEEEcCCCC
Q 013515 377 VVYSTCSIH 385 (441)
Q Consensus 377 lvYsTCS~~ 385 (441)
|++.+|...
T Consensus 177 lv~d~~~~~ 185 (237)
T 3c3y_A 177 VAYDNTLWG 185 (237)
T ss_dssp EEEECTTGG
T ss_pred EEEecCCcC
Confidence 999887543
No 61
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=2.4e-11 Score=108.08 Aligned_cols=117 Identities=13% Similarity=0.120 Sum_probs=93.6
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
...++.-...+...+.+.++.+|||+|||+|..+..++. +..+|+++|+++.+++.++++++.+|++++.++++|+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~ 93 (183)
T 2yxd_A 17 PITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAE 93 (183)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHH
T ss_pred CcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcc
Confidence 344444556666777888899999999999999999987 45799999999999999999999999988999999987
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcC
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 382 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTC 382 (441)
+.. .. ++||.|+++++ . . . ..++..+.++ ++|.+++++|
T Consensus 94 ~~~-~~---~~~D~i~~~~~----~----~------------------~----------~~~l~~~~~~-~gG~l~~~~~ 132 (183)
T 2yxd_A 94 DVL-DK---LEFNKAFIGGT----K----N------------------I----------EKIIEILDKK-KINHIVANTI 132 (183)
T ss_dssp HHG-GG---CCCSEEEECSC----S----C------------------H----------HHHHHHHHHT-TCCEEEEEES
T ss_pred ccc-cC---CCCcEEEECCc----c----c------------------H----------HHHHHHHhhC-CCCEEEEEec
Confidence 722 21 57999999988 1 0 0 2556666666 8899999887
Q ss_pred C
Q 013515 383 S 383 (441)
Q Consensus 383 S 383 (441)
+
T Consensus 133 ~ 133 (183)
T 2yxd_A 133 V 133 (183)
T ss_dssp C
T ss_pred c
Confidence 5
No 62
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.31 E-value=6.3e-12 Score=115.91 Aligned_cols=116 Identities=16% Similarity=0.078 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++...+ ...|+|+|+++.+++.++++++..|++|+.++++|+.+++...+ .++||.|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFE-DGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSC-TTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC-CCCCCEEEE
Confidence 4688999999999999999998853 57999999999999999999999999999999999988652111 157999999
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
++|..-.. .+ |. +.+ ..+..+|..+.+.++ ||.++.+|
T Consensus 118 ~~~~~~~~--~~--------~~---------~~~-----~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPK--KR--------HE---------KRR-----LTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCS--GG--------GG---------GGS-----TTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccc--cc--------hh---------hhc-----cCCHHHHHHHHHHcCCCcEEEEEe
Confidence 98732110 00 00 000 124577888888777 67777654
No 63
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.31 E-value=1.1e-11 Score=114.51 Aligned_cols=82 Identities=24% Similarity=0.204 Sum_probs=65.2
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
+.+++|++|||+|||+|..+.+++...+ .++|+|+|+++.+++.+.+..+.. .|+.++.+|+.......+..++||.
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeE
Confidence 3467899999999999999999999876 689999999999998887777654 4788999998774210011167999
Q ss_pred EEEcC
Q 013515 317 ILLDP 321 (441)
Q Consensus 317 Il~Dp 321 (441)
|++|.
T Consensus 130 V~~~~ 134 (210)
T 1nt2_A 130 IYQDI 134 (210)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99983
No 64
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.31 E-value=1.2e-11 Score=126.02 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+.++++|||+|||+|..+..++.. ..+|+++|+++.+++.+++|++.+|++ ++++++|+.++.. .+||.|+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~-----~~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV-----KGFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-----TTCSEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-----cCCCEEE
Confidence 567899999999999999999875 369999999999999999999999998 9999999988753 2699999
Q ss_pred EcCCCCCC
Q 013515 319 LDPSCSGS 326 (441)
Q Consensus 319 ~DpPCSg~ 326 (441)
+|||++|.
T Consensus 359 ~dPPr~g~ 366 (425)
T 2jjq_A 359 VDPPRAGL 366 (425)
T ss_dssp ECCCTTCS
T ss_pred EcCCccch
Confidence 99997653
No 65
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.31 E-value=4.5e-12 Score=118.62 Aligned_cols=124 Identities=12% Similarity=0.140 Sum_probs=99.3
Q ss_pred cCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEe
Q 013515 220 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLH 298 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~ 298 (441)
.+...+|.....++..++...++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|+. +|+++.
T Consensus 50 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 128 (232)
T 3ntv_A 50 NEVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIE 128 (232)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred cCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34455677777777777777789999999999999999999853 4689999999999999999999999985 899999
Q ss_pred ccCCCCCC-CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcE
Q 013515 299 GDFLNLDP-KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VER 376 (441)
Q Consensus 299 ~D~~~~~~-~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~ 376 (441)
+|+.+..+ .. .++||.|++|+++.. +..++..+.++++ ||.
T Consensus 129 ~d~~~~~~~~~--~~~fD~V~~~~~~~~-----------------------------------~~~~l~~~~~~LkpgG~ 171 (232)
T 3ntv_A 129 GNALEQFENVN--DKVYDMIFIDAAKAQ-----------------------------------SKKFFEIYTPLLKHQGL 171 (232)
T ss_dssp SCGGGCHHHHT--TSCEEEEEEETTSSS-----------------------------------HHHHHHHHGGGEEEEEE
T ss_pred CCHHHHHHhhc--cCCccEEEEcCcHHH-----------------------------------HHHHHHHHHHhcCCCeE
Confidence 99987543 22 168999999977421 1357888888887 677
Q ss_pred EEEEc
Q 013515 377 VVYST 381 (441)
Q Consensus 377 lvYsT 381 (441)
|++..
T Consensus 172 lv~d~ 176 (232)
T 3ntv_A 172 VITDN 176 (232)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 77743
No 66
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.30 E-value=3.3e-11 Score=110.90 Aligned_cols=141 Identities=20% Similarity=0.203 Sum_probs=106.6
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 310 (441)
..+...+.+.++.+|||+|||+|..+..++...++..+|+++|+++.+++.+++++...|+.++.++.+|+.+++...
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~-- 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD-- 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS--
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC--
Confidence 455566788889999999999999999999987566799999999999999999999999989999999998876443
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCh--
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQV-- 387 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~-- 387 (441)
++||+|++... +..-+| ...+|..+.++++ ||.++.++++....
T Consensus 105 -~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 151 (219)
T 3dh0_A 105 -NTVDFIFMAFT------FHELSE--------------------------PLKFLEELKRVAKPFAYLAIIDWKKEERDK 151 (219)
T ss_dssp -SCEEEEEEESC------GGGCSS--------------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSS
T ss_pred -CCeeEEEeehh------hhhcCC--------------------------HHHHHHHHHHHhCCCeEEEEEEeccccccc
Confidence 67999997532 211000 1467888888777 78888877554332
Q ss_pred -------hcHHHHHHHhchhcCCCeEEec
Q 013515 388 -------ENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 388 -------ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
-+.+.+...++ ..+|+++.
T Consensus 152 ~~~~~~~~~~~~~~~~l~---~~Gf~~~~ 177 (219)
T 3dh0_A 152 GPPPEEVYSEWEVGLILE---DAGIRVGR 177 (219)
T ss_dssp SCCGGGSCCHHHHHHHHH---HTTCEEEE
T ss_pred CCchhcccCHHHHHHHHH---HCCCEEEE
Confidence 23456666664 35777654
No 67
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.30 E-value=2.9e-12 Score=117.45 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=67.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.+|+++++++++|+.+..+.. .++||+|++|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~--~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQK--GTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSC--CCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhc--CCCCCEEEEC
Confidence 6889999999999999987765 23599999999999999999999999989999999987743222 2579999999
Q ss_pred CCC
Q 013515 321 PSC 323 (441)
Q Consensus 321 pPC 323 (441)
||+
T Consensus 130 ~p~ 132 (202)
T 2fpo_A 130 PPF 132 (202)
T ss_dssp CSS
T ss_pred CCC
Confidence 994
No 68
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.30 E-value=1.7e-11 Score=115.12 Aligned_cols=131 Identities=10% Similarity=0.026 Sum_probs=96.9
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+|+.+|+++++|+.+++......++||.|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 44578999999999999999999764 45799999999999999999999999988999999998876321001679999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHH
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSV 396 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~ 396 (441)
+++.- . + ...++..+.++++ ||.+++..+....+|-+.... .
T Consensus 146 ~~~~~-------~---~--------------------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~-~ 188 (240)
T 1xdz_A 146 TARAV-------A---R--------------------------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKK-A 188 (240)
T ss_dssp EEECC-------S---C--------------------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHH-H
T ss_pred EEecc-------C---C--------------------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHH-H
Confidence 98552 0 0 1467888888887 788888777765554443333 3
Q ss_pred hchhcCCCeEEec
Q 013515 397 LPIAMSFGFQLAT 409 (441)
Q Consensus 397 l~~~~~~~~~~~~ 409 (441)
+ ...+|++..
T Consensus 189 l---~~~g~~~~~ 198 (240)
T 1xdz_A 189 I---TTLGGELEN 198 (240)
T ss_dssp H---HHTTEEEEE
T ss_pred H---HHcCCeEeE
Confidence 3 234666543
No 69
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.29 E-value=2.8e-12 Score=117.82 Aligned_cols=126 Identities=10% Similarity=0.117 Sum_probs=97.4
Q ss_pred CcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEec
Q 013515 221 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHG 299 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~ 299 (441)
|...++.....++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+. +++++++
T Consensus 36 ~~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 115 (210)
T 3c3p_A 36 NIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG 115 (210)
T ss_dssp TCCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES
T ss_pred CCCCcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe
Confidence 333455556666666555556889999999999999999988764689999999999999999999999884 5999999
Q ss_pred cCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEE
Q 013515 300 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVV 378 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lv 378 (441)
|+.+..+... + ||.|++|+++.. +..+++.+.++++ ||.++
T Consensus 116 d~~~~~~~~~--~-fD~v~~~~~~~~-----------------------------------~~~~l~~~~~~LkpgG~lv 157 (210)
T 3c3p_A 116 DPLGIAAGQR--D-IDILFMDCDVFN-----------------------------------GADVLERMNRCLAKNALLI 157 (210)
T ss_dssp CHHHHHTTCC--S-EEEEEEETTTSC-----------------------------------HHHHHHHHGGGEEEEEEEE
T ss_pred cHHHHhccCC--C-CCEEEEcCChhh-----------------------------------hHHHHHHHHHhcCCCeEEE
Confidence 9976533222 5 999999965310 1366888888887 78888
Q ss_pred EEcCCC
Q 013515 379 YSTCSI 384 (441)
Q Consensus 379 YsTCS~ 384 (441)
+..+..
T Consensus 158 ~~~~~~ 163 (210)
T 3c3p_A 158 AVNALR 163 (210)
T ss_dssp EESSSS
T ss_pred EECccc
Confidence 876654
No 70
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.29 E-value=3.6e-12 Score=119.51 Aligned_cols=102 Identities=21% Similarity=0.325 Sum_probs=84.0
Q ss_pred Ccccccch--hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEE
Q 013515 221 GCVFLQGK--ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVL 297 (441)
Q Consensus 221 g~~~~Qd~--ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~ 297 (441)
+++..+.. ...++..+....++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++.+|+ +++.++
T Consensus 56 ~~~~~~~~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 132 (241)
T 3gdh_A 56 GWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFI 132 (241)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred ceeecCHHHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEE
Confidence 44444444 4455555555558999999999999999999986 27999999999999999999999998 689999
Q ss_pred eccCCCCCCCCCCCCCccEEEEcCCCCCCccc
Q 013515 298 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 329 (441)
Q Consensus 298 ~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~ 329 (441)
++|+.+++.. ++||+|++||||.+.+..
T Consensus 133 ~~d~~~~~~~----~~~D~v~~~~~~~~~~~~ 160 (241)
T 3gdh_A 133 CGDFLLLASF----LKADVVFLSPPWGGPDYA 160 (241)
T ss_dssp ESCHHHHGGG----CCCSEEEECCCCSSGGGG
T ss_pred ECChHHhccc----CCCCEEEECCCcCCcchh
Confidence 9999887632 689999999999987654
No 71
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.28 E-value=1.9e-11 Score=111.91 Aligned_cols=98 Identities=20% Similarity=0.176 Sum_probs=84.4
Q ss_pred cCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec
Q 013515 220 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 299 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~ 299 (441)
.|.+..+......+...+.+.++.+|||+|||+|..+..++.. .++|+++|+++.+++.++++++.+|+.++++..+
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3555666666777788888999999999999999999999987 3799999999999999999999999989999999
Q ss_pred cCCCCCCCCCCCCCccEEEEcCCC
Q 013515 300 DFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
|+....... ++||.|+++.++
T Consensus 133 d~~~~~~~~---~~~D~i~~~~~~ 153 (210)
T 3lbf_A 133 DGWQGWQAR---APFDAIIVTAAP 153 (210)
T ss_dssp CGGGCCGGG---CCEEEEEESSBC
T ss_pred CcccCCccC---CCccEEEEccch
Confidence 998765432 689999998654
No 72
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.28 E-value=3.1e-11 Score=108.21 Aligned_cols=119 Identities=16% Similarity=0.218 Sum_probs=95.6
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc--EEEEeccCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN--IEVLHGDFLNLD 305 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~--v~~~~~D~~~~~ 305 (441)
..+..+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...|+.+ +.++++|+.+..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 56677777888889999999999999999998876 4799999999999999999999999887 999999998744
Q ss_pred CCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 306 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 306 ~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
.. ++||.|++++|... ..+ ....++..+.+.++ +|.++.++++.
T Consensus 116 ~~----~~~D~v~~~~~~~~------------------------~~~-------~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 116 KD----RKYNKIITNPPIRA------------------------GKE-------VLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TT----SCEEEEEECCCSTT------------------------CHH-------HHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cc----CCceEEEECCCccc------------------------chh-------HHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 32 67999999988421 011 12467777777777 68888776654
No 73
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.27 E-value=5.8e-12 Score=119.22 Aligned_cols=125 Identities=15% Similarity=0.132 Sum_probs=97.9
Q ss_pred cccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEecc
Q 013515 222 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGD 300 (441)
Q Consensus 222 ~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D 300 (441)
...++.....++..++...++.+|||+|||+|+.+..++..+++.++|+++|+++.+++.+++++++.|+ ++|+++.+|
T Consensus 60 ~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
T 1sui_A 60 IMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 139 (247)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 4556677777777777767788999999999999999999886568999999999999999999999998 579999999
Q ss_pred CCCCCCCCC----CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-Cc
Q 013515 301 FLNLDPKDP----AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VE 375 (441)
Q Consensus 301 ~~~~~~~~~----~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G 375 (441)
+.+..+... ..++||.|++|+++.. ....++.+.++++ ||
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG 184 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFVDADKDN-----------------------------------YLNYHKRLIDLVKVGG 184 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEECSCSTT-----------------------------------HHHHHHHHHHHBCTTC
T ss_pred HHHHHHHHHhccCCCCCEEEEEEcCchHH-----------------------------------HHHHHHHHHHhCCCCe
Confidence 876432100 0167999999976310 1355777777776 78
Q ss_pred EEEEEc
Q 013515 376 RVVYST 381 (441)
Q Consensus 376 ~lvYsT 381 (441)
.|++..
T Consensus 185 ~lv~d~ 190 (247)
T 1sui_A 185 VIGYDN 190 (247)
T ss_dssp CEEEEC
T ss_pred EEEEec
Confidence 888765
No 74
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=4.4e-12 Score=123.50 Aligned_cols=95 Identities=19% Similarity=0.198 Sum_probs=79.2
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|..++.....++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++..|.++++++++|+.
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 5556667778888889999999999999999999999875 3699999999999999999999888889999999998
Q ss_pred CCCCCCCCCCCccEEEEcCCCCC
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSG 325 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg 325 (441)
.++. .+||.|++|+|+..
T Consensus 101 ~~~~-----~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 101 KTVF-----PKFDVCTANIPYKI 118 (299)
T ss_dssp SSCC-----CCCSEEEEECCGGG
T ss_pred hCCc-----ccCCEEEEcCCccc
Confidence 8753 46899999999764
No 75
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.27 E-value=1.3e-11 Score=116.98 Aligned_cols=130 Identities=15% Similarity=0.097 Sum_probs=96.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..++.++... +..+|+++|+++.+++.++++++.+|+.||+++++|+.++.......++||.|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 4578999999999999999999875 458999999999999999999999999889999999988765311126899999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHh
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVL 397 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l 397 (441)
+..- . + . ..++..+.++++ ||.+++..+....+|-++. ...+
T Consensus 157 s~a~----~-------------------~---~----------~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~-~~~l 199 (249)
T 3g89_A 157 ARAV----A-------------------P---L----------CVLSELLLPFLEVGGAAVAMKGPRVEEELAPL-PPAL 199 (249)
T ss_dssp EESS----C-------------------C---H----------HHHHHHHGGGEEEEEEEEEEECSCCHHHHTTH-HHHH
T ss_pred ECCc----C-------------------C---H----------HHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHH-HHHH
Confidence 7421 0 0 0 367888888887 7888877777554443333 3333
Q ss_pred chhcCCCeEEec
Q 013515 398 PIAMSFGFQLAT 409 (441)
Q Consensus 398 ~~~~~~~~~~~~ 409 (441)
+ ..+|++..
T Consensus 200 ~---~~G~~~~~ 208 (249)
T 3g89_A 200 E---RLGGRLGE 208 (249)
T ss_dssp H---HHTEEEEE
T ss_pred H---HcCCeEEE
Confidence 2 24565543
No 76
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.26 E-value=3.6e-12 Score=118.10 Aligned_cols=126 Identities=10% Similarity=0.128 Sum_probs=97.8
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDF 301 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~ 301 (441)
+.++.....++..++...++.+|||+|||+|..+.+++..+++.++|+++|+++.+++.++++++..|+. +++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 4566667777777777778899999999999999999998765689999999999999999999999986 499999998
Q ss_pred CCCCCCCC---CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEE
Q 013515 302 LNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERV 377 (441)
Q Consensus 302 ~~~~~~~~---~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~l 377 (441)
.+..+... ..++||.|++|++.. + +..++..+.++++ ||.|
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~~---------~--------------------------~~~~l~~~~~~L~pgG~l 170 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADKA---------N--------------------------TDLYYEESLKLLREGGLI 170 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCGG---------G--------------------------HHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHhhhccCCCCccEEEECCCHH---------H--------------------------HHHHHHHHHHhcCCCcEE
Confidence 65432110 015799999999721 0 1346777778777 6888
Q ss_pred EEEcCC
Q 013515 378 VYSTCS 383 (441)
Q Consensus 378 vYsTCS 383 (441)
+...+.
T Consensus 171 v~~~~~ 176 (225)
T 3tr6_A 171 AVDNVL 176 (225)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 765554
No 77
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.26 E-value=3.7e-11 Score=120.65 Aligned_cols=138 Identities=11% Similarity=0.058 Sum_probs=101.2
Q ss_pred cchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC---cEEEEeccCC
Q 013515 226 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA---NIEVLHGDFL 302 (441)
Q Consensus 226 Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~---~v~~~~~D~~ 302 (441)
.|..+.++...+...++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++|++.+|+. ++.++.+|+.
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 45677788888888888999999999999999999874 4579999999999999999999999975 5889999998
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
+.... ++||.|++|||......+.+ ....+++..+.+.++ ||.++.++
T Consensus 286 ~~~~~----~~fD~Ii~nppfh~~~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 286 SGVEP----FRFNAVLCNPPFHQQHALTD---------------------------NVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TTCCT----TCEEEEEECCCC-------C---------------------------CHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCC----CCeeEEEECCCcccCcccCH---------------------------HHHHHHHHHHHHhCCCCcEEEEEE
Confidence 74321 68999999999643111100 011367888888777 67776665
Q ss_pred CCCCChhcHHHHHHHh
Q 013515 382 CSIHQVENEDVIKSVL 397 (441)
Q Consensus 382 CS~~~~ENe~vV~~~l 397 (441)
-+..+. +..+.+..
T Consensus 335 n~~~~~--~~~l~~~f 348 (375)
T 4dcm_A 335 NRHLDY--FHKLKKIF 348 (375)
T ss_dssp ETTSCH--HHHHHHHH
T ss_pred ECCcCH--HHHHHHhc
Confidence 444433 33444443
No 78
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.26 E-value=6.5e-12 Score=116.06 Aligned_cols=116 Identities=18% Similarity=0.099 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++... +...|+|+|+++.+++.++++++..|+.|+.++++|+..++...+ .++||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~-~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE-PGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC-TTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC-cCCcCEEEE
Confidence 468899999999999999999885 457999999999999999999999999999999999987541111 157999998
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
..|+.-.-. + |. ..+ ..+..+|..+.+.|+ ||.++++|
T Consensus 115 ~~~~p~~~~--~--------~~---------~~r-----l~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWPKK--R--------HE---------KRR-----LTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCCSG--G--------GG---------GGS-----TTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCcCc--c--------cc---------ccc-----cCcHHHHHHHHHHcCCCCEEEEEe
Confidence 766321000 0 00 000 014577888888776 78888775
No 79
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.26 E-value=3.7e-11 Score=106.65 Aligned_cols=135 Identities=17% Similarity=0.179 Sum_probs=99.2
Q ss_pred cCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEe
Q 013515 220 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLH 298 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~ 298 (441)
+|.+..++. ...+...+.+.++++|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+|+. ++ +++
T Consensus 5 ~g~~t~~~~-~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~ 81 (178)
T 3hm2_A 5 DGQLTKQHV-RALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQ 81 (178)
T ss_dssp -CCSHHHHH-HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEE
T ss_pred CCcccHHHH-HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEe
Confidence 455544433 3455566788899999999999999999998875 4589999999999999999999999986 88 888
Q ss_pred ccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEE
Q 013515 299 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERV 377 (441)
Q Consensus 299 ~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~l 377 (441)
+|+....+.. .++||.|+++.+... ..+++.+.+.++ ||.+
T Consensus 82 ~d~~~~~~~~--~~~~D~i~~~~~~~~------------------------------------~~~l~~~~~~L~~gG~l 123 (178)
T 3hm2_A 82 QGAPRAFDDV--PDNPDVIFIGGGLTA------------------------------------PGVFAAAWKRLPVGGRL 123 (178)
T ss_dssp CCTTGGGGGC--CSCCSEEEECC-TTC------------------------------------TTHHHHHHHTCCTTCEE
T ss_pred cchHhhhhcc--CCCCCEEEECCcccH------------------------------------HHHHHHHHHhcCCCCEE
Confidence 8885432221 157999997665311 245777888777 7899
Q ss_pred EEEcCCCCChhcHHHHHHHhc
Q 013515 378 VYSTCSIHQVENEDVIKSVLP 398 (441)
Q Consensus 378 vYsTCS~~~~ENe~vV~~~l~ 398 (441)
++++++. ++...+..+++
T Consensus 124 ~~~~~~~---~~~~~~~~~~~ 141 (178)
T 3hm2_A 124 VANAVTV---ESEQMLWALRK 141 (178)
T ss_dssp EEEECSH---HHHHHHHHHHH
T ss_pred EEEeecc---ccHHHHHHHHH
Confidence 9887764 44455555554
No 80
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.25 E-value=7.1e-12 Score=121.95 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=78.1
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC--
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-- 309 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-- 309 (441)
.+...|++++|++|||+|||+|+++..+++.++ .++|+|+|+|+.+++.++++++.+| .+++++++|+.+++....
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHT
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhc
Confidence 445677889999999999999999999999864 5899999999999999999999988 789999999987652110
Q ss_pred CCCCccEEEEcCCCCC
Q 013515 310 AYSEVRAILLDPSCSG 325 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg 325 (441)
...+||.|++|||||.
T Consensus 95 g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 95 GIEKVDGILMDLGVST 110 (301)
T ss_dssp TCSCEEEEEEECSCCH
T ss_pred CCCCCCEEEEcCccch
Confidence 1147999999999985
No 81
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.24 E-value=5.2e-11 Score=114.92 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=84.8
Q ss_pred HHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 013515 235 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
.++++++|++|||+|||+|+.|..++.... .++|+++|+++.+++.+++++++.|+++|+++++|+.+++ + ++|
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d---~~F 189 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--G---LEF 189 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--G---CCC
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--C---CCc
Confidence 357889999999999999998765544433 4799999999999999999999999989999999998875 2 679
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
|+|+++.- + +| ..++++.+.+.++ ||+||...
T Consensus 190 DvV~~~a~-----~----~d--------------------------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAAL-----A----EP--------------------------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTT-----C----SC--------------------------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCC-----c----cC--------------------------HHHHHHHHHHHcCCCcEEEEEc
Confidence 99998542 1 11 1367888888776 78888764
No 82
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.23 E-value=1.1e-10 Score=108.62 Aligned_cols=125 Identities=21% Similarity=0.254 Sum_probs=95.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++.+++.+++|++++|+. +|++..+|.....+.. ..||.|
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~---~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET---DQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG---GCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC---cCCCEE
Confidence 457899999999999999999886 44579999999999999999999999996 5999999986543221 369999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHH
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSV 396 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~ 396 (441)
++ .|.|- ..=..||..+...++ +|++|.+.-+ +...|.+.
T Consensus 89 vi----aG~Gg------------------------------~~i~~Il~~~~~~L~~~~~lVlq~~~-----~~~~vr~~ 129 (225)
T 3kr9_A 89 TI----AGMGG------------------------------RLIARILEEGLGKLANVERLILQPNN-----REDDLRIW 129 (225)
T ss_dssp EE----EEECH------------------------------HHHHHHHHHTGGGCTTCCEEEEEESS-----CHHHHHHH
T ss_pred EE----cCCCh------------------------------HHHHHHHHHHHHHhCCCCEEEEECCC-----CHHHHHHH
Confidence 86 23331 011468888888776 6899887653 67777777
Q ss_pred hchhcCCCeEEec
Q 013515 397 LPIAMSFGFQLAT 409 (441)
Q Consensus 397 l~~~~~~~~~~~~ 409 (441)
|. ..+|++..
T Consensus 130 L~---~~Gf~i~~ 139 (225)
T 3kr9_A 130 LQ---DHGFQIVA 139 (225)
T ss_dssp HH---HTTEEEEE
T ss_pred HH---HCCCEEEE
Confidence 74 34676543
No 83
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.23 E-value=7.4e-11 Score=118.65 Aligned_cols=122 Identities=16% Similarity=0.198 Sum_probs=94.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.+|.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++|++.+|++ ++++++|+.+..... ++||.|++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~~~---~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALTEE---ARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSCTT---CCEEEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhccccC---CCeEEEEE
Confidence 47889999999999999999986 369999999999999999999999875 889999998876542 68999999
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHh
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVL 397 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l 397 (441)
|||....+... . .....++..+.+.++ ||.++.+++...+.+ ..+.+..
T Consensus 305 npp~~~~~~~~--------------------~-------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~--~~l~~~f 354 (381)
T 3dmg_A 305 NPPFHVGGAVI--------------------L-------DVAQAFVNVAAARLRPGGVFFLVSNPFLKYE--PLLEEKF 354 (381)
T ss_dssp CCCCCTTCSSC--------------------C-------HHHHHHHHHHHHHEEEEEEEEEEECTTSCHH--HHHHHHH
T ss_pred CCchhhccccc--------------------H-------HHHHHHHHHHHHhcCcCcEEEEEEcCCCChH--HHHHHhh
Confidence 99986433210 0 123477888888777 788888877765443 3444433
No 84
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.23 E-value=9.8e-11 Score=115.63 Aligned_cols=98 Identities=21% Similarity=0.291 Sum_probs=78.0
Q ss_pred cccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC-----------CC
Q 013515 224 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG-----------AA 292 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g-----------~~ 292 (441)
..+......+...+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.+| ..
T Consensus 88 ~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 88 ITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp CCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCC
T ss_pred ccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCC
Confidence 3444445666777889999999999999999999999987666899999999999999999999754 36
Q ss_pred cEEEEeccCCCCCCCCCCCCCccEEEEcCC
Q 013515 293 NIEVLHGDFLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 293 ~v~~~~~D~~~~~~~~~~~~~fD~Il~DpP 322 (441)
++.++.+|+.+.....+ .++||.|++|+|
T Consensus 168 ~v~~~~~d~~~~~~~~~-~~~fD~V~~~~~ 196 (336)
T 2b25_A 168 NVDFIHKDISGATEDIK-SLTFDAVALDML 196 (336)
T ss_dssp CEEEEESCTTCCC--------EEEEEECSS
T ss_pred ceEEEECChHHcccccC-CCCeeEEEECCC
Confidence 89999999988642211 157999999987
No 85
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.22 E-value=5.8e-11 Score=111.27 Aligned_cols=90 Identities=14% Similarity=0.203 Sum_probs=80.3
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
.|+.++...+..+++.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..|+.++.++.+|+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL 81 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC
Confidence 477889999999999999999999999999999988763 58999999999999999999999998999999999887
Q ss_pred CCCCCCCCCccEEEEc
Q 013515 305 DPKDPAYSEVRAILLD 320 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~D 320 (441)
+..+ ++||.|++.
T Consensus 82 ~~~~---~~fD~v~~~ 94 (239)
T 1xxl_A 82 PFPD---DSFDIITCR 94 (239)
T ss_dssp CSCT---TCEEEEEEE
T ss_pred CCCC---CcEEEEEEC
Confidence 6443 689999974
No 86
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.22 E-value=1.1e-10 Score=109.98 Aligned_cols=115 Identities=13% Similarity=0.032 Sum_probs=90.8
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKD 308 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~ 308 (441)
...+...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.++++++..|+. ++.++++|+.+++. +
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~ 101 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-N 101 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-S
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-C
Confidence 3445566778899999999999999999999886 358999999999999999999999984 89999999998765 3
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
++||+|++- +++..-+| ...+|..+.+.++ ||.++.++.
T Consensus 102 ---~~fD~V~~~------~~~~~~~~--------------------------~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 102 ---EKCDVAACV------GATWIAGG--------------------------FAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp ---SCEEEEEEE------SCGGGTSS--------------------------SHHHHHHHTTSEEEEEEEEEEEE
T ss_pred ---CCCCEEEEC------CChHhcCC--------------------------HHHHHHHHHHHcCCCeEEEEecC
Confidence 689999962 22211111 1467888888887 687777654
No 87
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.22 E-value=2.6e-11 Score=107.99 Aligned_cols=87 Identities=18% Similarity=0.216 Sum_probs=71.5
Q ss_pred HHHHhC-CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 013515 233 VAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 233 ~~~~l~-~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 310 (441)
+...+. ..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..|+. ++.++++|+.+..+..
T Consensus 22 ~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-- 97 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-- 97 (177)
T ss_dssp HHHHHCSCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB--
T ss_pred HHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh--
Confidence 333444 567899999999999999999876 3479999999999999999999999884 7999999998743211
Q ss_pred CCCccEEEEcCCC
Q 013515 311 YSEVRAILLDPSC 323 (441)
Q Consensus 311 ~~~fD~Il~DpPC 323 (441)
.++||.|++|||+
T Consensus 98 ~~~fD~i~~~~~~ 110 (177)
T 2esr_A 98 TGRFDLVFLDPPY 110 (177)
T ss_dssp CSCEEEEEECCSS
T ss_pred cCCCCEEEECCCC
Confidence 1569999999995
No 88
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.22 E-value=6.3e-11 Score=112.78 Aligned_cols=112 Identities=15% Similarity=0.175 Sum_probs=90.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+.++.+|||+|||+|..+..++.. +.++|+++|+++.+++.++++++..|+ ++++++++|+.+++... ++||.|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRN---EELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT---TCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCC---CCEEEE
Confidence 578999999999999999999887 446999999999999999999999998 45999999998877443 689999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChh
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVE 388 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~E 388 (441)
++....... | . ..+|..+.+.++ ||.++.++++.....
T Consensus 119 ~~~~~~~~~-------~----------------~----------~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 157 (267)
T 3kkz_A 119 WSEGAIYNI-------G----------------F----------ERGLNEWRKYLKKGGYLAVSECSWFTDE 157 (267)
T ss_dssp EESSCGGGT-------C----------------H----------HHHHHHHGGGEEEEEEEEEEEEEESSSC
T ss_pred EEcCCceec-------C----------------H----------HHHHHHHHHHcCCCCEEEEEEeeecCCC
Confidence 976543211 0 1 357888888887 789988887655443
No 89
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.22 E-value=1.5e-11 Score=115.53 Aligned_cols=147 Identities=10% Similarity=0.078 Sum_probs=103.6
Q ss_pred ccccc-chhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHH---hcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE
Q 013515 222 CVFLQ-GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAAL---MKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 297 (441)
Q Consensus 222 ~~~~Q-d~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~---~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~ 297 (441)
....| .....++..++...++.+|||+|||+|+.|..++.. +.+.++|+++|+++.+++.++ ..+ .+|+++
T Consensus 61 ~~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~ 135 (236)
T 2bm8_A 61 LRMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLH 135 (236)
T ss_dssp EECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEE
T ss_pred ccccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEE
Confidence 34455 333445555565556789999999999999999997 456689999999999988776 122 689999
Q ss_pred eccCCCC---CCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhC-CCC
Q 013515 298 HGDFLNL---DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPG 373 (441)
Q Consensus 298 ~~D~~~~---~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~-~~~ 373 (441)
++|+.+. +... ..+||.|++|... .+ ...+|..+.+ .++
T Consensus 136 ~gD~~~~~~l~~~~--~~~fD~I~~d~~~---------~~--------------------------~~~~l~~~~r~~Lk 178 (236)
T 2bm8_A 136 QGDCSDLTTFEHLR--EMAHPLIFIDNAH---------AN--------------------------TFNIMKWAVDHLLE 178 (236)
T ss_dssp ECCSSCSGGGGGGS--SSCSSEEEEESSC---------SS--------------------------HHHHHHHHHHHTCC
T ss_pred ECcchhHHHHHhhc--cCCCCEEEECCch---------Hh--------------------------HHHHHHHHHHhhCC
Confidence 9999875 3211 1369999998751 01 0356777775 776
Q ss_pred -CcEEEEEc-CCCCChhcHHHHHHHhchhcCCCeEEecCC
Q 013515 374 -VERVVYST-CSIHQVENEDVIKSVLPIAMSFGFQLATPF 411 (441)
Q Consensus 374 -~G~lvYsT-CS~~~~ENe~vV~~~l~~~~~~~~~~~~~~ 411 (441)
||.||++. |.+.+..+++.+..+++.. ..+|++....
T Consensus 179 pGG~lv~~d~~~~~~~~~~~~~~~~l~~~-~~~f~~~~~~ 217 (236)
T 2bm8_A 179 EGDYFIIEDMIPYWYRYAPQLFSEYLGAF-RDVLSMDMLY 217 (236)
T ss_dssp TTCEEEECSCHHHHHHHCHHHHHHHHHTT-TTTEEEETTT
T ss_pred CCCEEEEEeCcccccccCHHHHHHHHHhC-cccEEEcchh
Confidence 78888764 4455567777888888642 1278876543
No 90
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.21 E-value=6.8e-11 Score=112.01 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=77.7
Q ss_pred ChhhhcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 013515 215 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 294 (441)
Q Consensus 215 ~~~~~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v 294 (441)
++.|.......|......+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..|+.++
T Consensus 11 ~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v 87 (260)
T 1vl5_A 11 HHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQV 87 (260)
T ss_dssp ------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred ceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCce
Confidence 4677777778888888888888888899999999999999999988763 4999999999999999999999998899
Q ss_pred EEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 295 EVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 295 ~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
.++.+|+..++..+ ++||.|++.
T Consensus 88 ~~~~~d~~~l~~~~---~~fD~V~~~ 110 (260)
T 1vl5_A 88 EYVQGDAEQMPFTD---ERFHIVTCR 110 (260)
T ss_dssp EEEECCC-CCCSCT---TCEEEEEEE
T ss_pred EEEEecHHhCCCCC---CCEEEEEEh
Confidence 99999999877543 689999964
No 91
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.21 E-value=1.1e-10 Score=114.03 Aligned_cols=123 Identities=12% Similarity=0.088 Sum_probs=94.8
Q ss_pred ccchhhHHHHHHhC-CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 013515 225 LQGKASSMVAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 302 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~-~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~ 302 (441)
+++.....+...+. +.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. ++.++++|+.
T Consensus 100 ~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 177 (312)
T 3vc1_A 100 LESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML 177 (312)
T ss_dssp HHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 34444445556666 7889999999999999999999875 368999999999999999999999985 7999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
+++... ++||+|++. +++.. .. +..+|..+.+.++ ||.+++++
T Consensus 178 ~~~~~~---~~fD~V~~~------~~l~~-----------------~~----------~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 178 DTPFDK---GAVTASWNN------ESTMY-----------------VD----------LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp SCCCCT---TCEEEEEEE------SCGGG-----------------SC----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCC---CCEeEEEEC------Cchhh-----------------CC----------HHHHHHHHHHHcCCCcEEEEEE
Confidence 876443 689999952 22210 00 3577888888777 78888877
Q ss_pred CCCC
Q 013515 382 CSIH 385 (441)
Q Consensus 382 CS~~ 385 (441)
....
T Consensus 222 ~~~~ 225 (312)
T 3vc1_A 222 GCWN 225 (312)
T ss_dssp EEEC
T ss_pred cccc
Confidence 5433
No 92
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.21 E-value=1.7e-10 Score=107.61 Aligned_cols=125 Identities=17% Similarity=0.198 Sum_probs=95.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+.+|++|||+|||+|..++.++.. ++..+|+|+|+++.+++.+++|++++|+. +|++..+|..+..... ..||.|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~---~~~D~I 94 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEA---DNIDTI 94 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG---GCCCEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccc---cccCEE
Confidence 467899999999999999999886 44579999999999999999999999995 5999999998766432 369998
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHH
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSV 396 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~ 396 (441)
++ .|.|- .+=.+||..+...++ +|.+|-|.-+ +++.|.+.
T Consensus 95 vi----aGmGg------------------------------~lI~~IL~~~~~~l~~~~~lIlqp~~-----~~~~lr~~ 135 (230)
T 3lec_A 95 TI----CGMGG------------------------------RLIADILNNDIDKLQHVKTLVLQPNN-----REDDLRKW 135 (230)
T ss_dssp EE----EEECH------------------------------HHHHHHHHHTGGGGTTCCEEEEEESS-----CHHHHHHH
T ss_pred EE----eCCch------------------------------HHHHHHHHHHHHHhCcCCEEEEECCC-----ChHHHHHH
Confidence 86 23331 011467888877666 6888887643 57777777
Q ss_pred hchhcCCCeEEec
Q 013515 397 LPIAMSFGFQLAT 409 (441)
Q Consensus 397 l~~~~~~~~~~~~ 409 (441)
|. ..+|++..
T Consensus 136 L~---~~Gf~i~~ 145 (230)
T 3lec_A 136 LA---ANDFEIVA 145 (230)
T ss_dssp HH---HTTEEEEE
T ss_pred HH---HCCCEEEE
Confidence 74 34676644
No 93
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.21 E-value=9.4e-11 Score=110.55 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=89.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.+++++...|+.+ ++++++|+..++... ++||+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~fD~ 117 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN---EELDL 117 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT---TCEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCC---CCEEE
Confidence 467889999999999999999999853 499999999999999999999999865 999999998877543 68999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ 386 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~ 386 (441)
|++....... | . ..+|..+.++++ ||.++.++++...
T Consensus 118 v~~~~~l~~~-------~----------------~----------~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 118 IWSEGAIYNI-------G----------------F----------ERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp EEEESCSCCC-------C----------------H----------HHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred EEecChHhhc-------C----------------H----------HHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 9976432110 0 1 357888889887 7888888765443
No 94
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.21 E-value=3.4e-11 Score=119.48 Aligned_cols=141 Identities=9% Similarity=0.051 Sum_probs=98.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCC----cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCC
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGK----GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~----~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
++.++.+|||.|||+|+++..++..+... ..|+|+|+++.+++.++.++...|+ ++.++++|+..... ..+
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~~----~~~ 201 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANLL----VDP 201 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCCC----CCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCccc----cCC
Confidence 56678999999999999999999887543 7899999999999999999999998 68899999876432 267
Q ss_pred ccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc-CCCCChhcHH
Q 013515 314 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST-CSIHQVENED 391 (441)
Q Consensus 314 fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT-CS~~~~ENe~ 391 (441)
||+|+.|||++ .+.. .+. +.+.... . .......+..++.++++.++ +|.+++.+ .++...+.+.
T Consensus 202 fD~Ii~NPPfg---~~~~-~~~-~~~~~~~------~---~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~ 267 (344)
T 2f8l_A 202 VDVVISDLPVG---YYPD-DEN-AKTFELC------R---EEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFA 267 (344)
T ss_dssp EEEEEEECCCS---EESC-HHH-HTTSTTC------C---SSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHH
T ss_pred ccEEEECCCCC---CcCc-hhh-hhhcccc------C---CCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHH
Confidence 99999999973 2211 110 0000000 0 00112245678899988887 68777765 3444444556
Q ss_pred HHHHHh
Q 013515 392 VIKSVL 397 (441)
Q Consensus 392 vV~~~l 397 (441)
.+.+.|
T Consensus 268 ~ir~~l 273 (344)
T 2f8l_A 268 KVDKFI 273 (344)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666555
No 95
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.21 E-value=2.9e-11 Score=124.18 Aligned_cols=156 Identities=17% Similarity=0.195 Sum_probs=112.6
Q ss_pred cCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhc------------CCcEEEEEeCCHHHHHHHHHHHH
Q 013515 220 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK------------GKGKIVACELNKERVRRLKDTIK 287 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~------------~~~~V~a~D~~~~rl~~l~~~~~ 287 (441)
.|.|+--..-+.+++.++.+.++.+|||.|||+|++...+++.+. ....++|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 455555555677888889999999999999999999999988752 12579999999999999999999
Q ss_pred HhCCC--cEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccc---cCccCCCCCCCCCCCcccHHHHHHHHHHHH
Q 013515 288 LSGAA--NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER---LDHLLPSHASGHTADPTEMERLNKLSAFQK 362 (441)
Q Consensus 288 ~~g~~--~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~---pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~ 362 (441)
..|+. ++.+.++|+...+.. .+||+|+.+||.++....... .+..++ . ...+.
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~----~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~----------~--------~~~~~ 287 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS----TLVDVILANPPFGTRPAGSVDINRPDFYVE----------T--------KNNQL 287 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS----SCEEEEEECCCSSCCCTTCCCCCCTTSSSC----------C--------SCHHH
T ss_pred HhCCCcCCCCEeeCCCCCCccc----CCcCEEEECCCCCCcccccchhhHhhcCCC----------C--------cchHH
Confidence 99985 678899999876533 479999999999876543211 111110 0 11256
Q ss_pred HHHHHHhCCCC-CcEEEEEcCC--CCChhcHHHHHH-Hh
Q 013515 363 KALRHALSFPG-VERVVYSTCS--IHQVENEDVIKS-VL 397 (441)
Q Consensus 363 ~lL~~a~~~~~-~G~lvYsTCS--~~~~ENe~vV~~-~l 397 (441)
..+.+++++++ +|++++.++. ++....+..+.+ ++
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~ 326 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLL 326 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHH
Confidence 78888888777 7888887754 222223444554 44
No 96
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.20 E-value=4e-11 Score=114.44 Aligned_cols=88 Identities=18% Similarity=0.306 Sum_probs=72.4
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFL 302 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~ 302 (441)
+++....++..++ ++|.+|||+|||+|..+..+++.+.. ..+|+|+|+++.|++.++++++..+. .+|+++++|+.
T Consensus 56 ~~~~i~~l~~~~~--~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 56 IISMIGMLAERFV--QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHHC--CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHhC--CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 4444455555554 68999999999999999999987643 35999999999999999999998886 57999999998
Q ss_pred CCCCCCCCCCCccEEEE
Q 013515 303 NLDPKDPAYSEVRAILL 319 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~ 319 (441)
+++. ++||.|++
T Consensus 134 ~~~~-----~~~d~v~~ 145 (261)
T 4gek_A 134 DIAI-----ENASMVVL 145 (261)
T ss_dssp TCCC-----CSEEEEEE
T ss_pred cccc-----ccccccee
Confidence 8763 46899985
No 97
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.20 E-value=2.2e-11 Score=113.97 Aligned_cols=148 Identities=15% Similarity=0.159 Sum_probs=106.9
Q ss_pred cccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 013515 224 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 302 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~ 302 (441)
.++.....++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+. +|+++.+|+.
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 445555666666666667889999999999999999998765689999999999999999999999984 6999999976
Q ss_pred CCCCCCC---CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEE
Q 013515 303 NLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVV 378 (441)
Q Consensus 303 ~~~~~~~---~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lv 378 (441)
+.....+ ..++||.|++|++.. + ....++.+.++++ ||.|+
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~~~---------~--------------------------~~~~l~~~~~~LkpgG~lv 179 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDADKR---------N--------------------------YPRYYEIGLNLLRRGGLMV 179 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSCGG---------G--------------------------HHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHhcCCCCCcCEEEECCCHH---------H--------------------------HHHHHHHHHHHcCCCeEEE
Confidence 5321100 015799999997721 0 1356777888887 78999
Q ss_pred EEcCCCC--------ChhcHHHHHHHhchh-cCCCeE
Q 013515 379 YSTCSIH--------QVENEDVIKSVLPIA-MSFGFQ 406 (441)
Q Consensus 379 YsTCS~~--------~~ENe~vV~~~l~~~-~~~~~~ 406 (441)
+..+... ..+....+.++.+.. .++.++
T Consensus 180 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 216 (232)
T 3cbg_A 180 IDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVR 216 (232)
T ss_dssp EECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEE
T ss_pred EeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeE
Confidence 8877764 234445666666532 234454
No 98
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.20 E-value=2.1e-10 Score=107.58 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=77.3
Q ss_pred chhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCC
Q 013515 227 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLD 305 (441)
Q Consensus 227 d~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~ 305 (441)
......+...+++.+|++|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..|+ +++.+..+|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 444556777788889999999999999999999987 47999999999999999999999998 78999999998754
Q ss_pred CCCCCCCCccEEEEcCC
Q 013515 306 PKDPAYSEVRAILLDPS 322 (441)
Q Consensus 306 ~~~~~~~~fD~Il~DpP 322 (441)
... ..||.|++|+|
T Consensus 154 ~~~---~~~D~v~~~~~ 167 (248)
T 2yvl_A 154 VPE---GIFHAAFVDVR 167 (248)
T ss_dssp CCT---TCBSEEEECSS
T ss_pred cCC---CcccEEEECCc
Confidence 222 57999999887
No 99
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.20 E-value=1.2e-11 Score=120.31 Aligned_cols=128 Identities=14% Similarity=0.095 Sum_probs=92.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEeccCCCCCCCCCCCCCccE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G--AANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g--~~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
.+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++..+ + .++++++.+|+....... .++||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF--KNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC--SSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--CCCceE
Confidence 46899999999999999998764 3479999999999999999998752 2 368999999987643222 167999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC--CCChhcHHHH
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS--IHQVENEDVI 393 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS--~~~~ENe~vV 393 (441)
|++|+|+...|... . ..+.+++..+.+.|+ ||.+++.+|+ +++++...++
T Consensus 167 Ii~d~~~~~~~~~~----~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 219 (296)
T 1inl_A 167 IIIDSTDPTAGQGG----H-----------------------LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAY 219 (296)
T ss_dssp EEEEC-------------------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHH
T ss_pred EEEcCCCcccCchh----h-----------------------hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHH
Confidence 99999975333210 0 012467778878777 7999999998 5567777777
Q ss_pred HHHhc
Q 013515 394 KSVLP 398 (441)
Q Consensus 394 ~~~l~ 398 (441)
+.+.+
T Consensus 220 ~~l~~ 224 (296)
T 1inl_A 220 RRISK 224 (296)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 100
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.19 E-value=1.2e-10 Score=107.99 Aligned_cols=82 Identities=26% Similarity=0.314 Sum_probs=68.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+.+|++|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. .+++++++|+.+........++||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 678999999999999999999998766689999999999999999998765 689999999987431100115799999
Q ss_pred EcCC
Q 013515 319 LDPS 322 (441)
Q Consensus 319 ~DpP 322 (441)
+|+|
T Consensus 149 ~~~~ 152 (227)
T 1g8a_A 149 EDVA 152 (227)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9988
No 101
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.19 E-value=1.2e-10 Score=106.20 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=97.5
Q ss_pred HHHHHHhC--CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC
Q 013515 231 SMVAAALA--PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 231 ~l~~~~l~--~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~ 308 (441)
..+...+. +.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..|+.++.+.++|+.+...
T Consensus 48 ~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-- 123 (205)
T 3grz_A 48 QLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVD-- 123 (205)
T ss_dssp HHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCC--
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCC--
Confidence 33444443 567899999999999999998874 346999999999999999999999998789999999977532
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCh
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQV 387 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ 387 (441)
++||.|++++|.. ....++..+.++++ +|.++.++.. .
T Consensus 124 ---~~fD~i~~~~~~~-----------------------------------~~~~~l~~~~~~L~~gG~l~~~~~~---~ 162 (205)
T 3grz_A 124 ---GKFDLIVANILAE-----------------------------------ILLDLIPQLDSHLNEDGQVIFSGID---Y 162 (205)
T ss_dssp ---SCEEEEEEESCHH-----------------------------------HHHHHGGGSGGGEEEEEEEEEEEEE---G
T ss_pred ---CCceEEEECCcHH-----------------------------------HHHHHHHHHHHhcCCCCEEEEEecC---c
Confidence 6799999987620 01466777888777 6888876443 2
Q ss_pred hcHHHHHHHhchhcCCCeEEec
Q 013515 388 ENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 388 ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
+....+...++ ..+|+++.
T Consensus 163 ~~~~~~~~~~~---~~Gf~~~~ 181 (205)
T 3grz_A 163 LQLPKIEQALA---ENSFQIDL 181 (205)
T ss_dssp GGHHHHHHHHH---HTTEEEEE
T ss_pred ccHHHHHHHHH---HcCCceEE
Confidence 23444555553 35777654
No 102
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.19 E-value=1.3e-10 Score=103.90 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=99.7
Q ss_pred cccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCC
Q 013515 224 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFL 302 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~ 302 (441)
..++.-...+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..|+ .++.+.++|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 3445556666777888899999999999999999998764 7999999999999999999999998 78999999987
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
+..+.. ..||.|+++.+.. + . ..++..+.++++ +|.+++++
T Consensus 93 ~~~~~~---~~~D~v~~~~~~~-------~------------------~----------~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 93 EALCKI---PDIDIAVVGGSGG-------E------------------L----------QEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp HHHTTS---CCEEEEEESCCTT-------C------------------H----------HHHHHHHHHTEEEEEEEEEEE
T ss_pred HhcccC---CCCCEEEECCchH-------H------------------H----------HHHHHHHHHhcCCCcEEEEEe
Confidence 622221 4799999886631 0 0 367888888877 78998887
Q ss_pred CCCCChhcHHHHHHHhc
Q 013515 382 CSIHQVENEDVIKSVLP 398 (441)
Q Consensus 382 CS~~~~ENe~vV~~~l~ 398 (441)
|+ .++...+..+++
T Consensus 135 ~~---~~~~~~~~~~l~ 148 (192)
T 1l3i_A 135 IL---LETKFEAMECLR 148 (192)
T ss_dssp CB---HHHHHHHHHHHH
T ss_pred cC---cchHHHHHHHHH
Confidence 75 233334444553
No 103
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.17 E-value=7.4e-11 Score=105.58 Aligned_cols=88 Identities=20% Similarity=0.196 Sum_probs=70.5
Q ss_pred HHHhC-CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCC-C
Q 013515 234 AAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDP-A 310 (441)
Q Consensus 234 ~~~l~-~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~-~ 310 (441)
...+. ..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..|+ ++++++++|+.+.....+ .
T Consensus 36 ~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 113 (187)
T 2fhp_A 36 FNMIGPYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE 113 (187)
T ss_dssp HHHHCSCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT
T ss_pred HHHHHhhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc
Confidence 33443 357899999999999999988774 347999999999999999999999997 579999999977432100 0
Q ss_pred CCCccEEEEcCCC
Q 013515 311 YSEVRAILLDPSC 323 (441)
Q Consensus 311 ~~~fD~Il~DpPC 323 (441)
.++||.|++|||.
T Consensus 114 ~~~fD~i~~~~~~ 126 (187)
T 2fhp_A 114 KLQFDLVLLDPPY 126 (187)
T ss_dssp TCCEEEEEECCCG
T ss_pred CCCCCEEEECCCC
Confidence 1579999999994
No 104
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.17 E-value=4.8e-11 Score=110.74 Aligned_cols=92 Identities=24% Similarity=0.299 Sum_probs=76.7
Q ss_pred hHHHHHHh--CCCCCCEEEEEcCCCchHHHHHHHHhc----CCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEe
Q 013515 230 SSMVAAAL--APKPGWKVLDACSAPGNKTVHLAALMK----GKGKIVACELNKERVRRLKDTIKLSG-----AANIEVLH 298 (441)
Q Consensus 230 s~l~~~~l--~~~~g~~VLDl~ag~G~kt~~la~~~~----~~~~V~a~D~~~~rl~~l~~~~~~~g-----~~~v~~~~ 298 (441)
...+...+ .+.++.+|||+|||+|..+..++...+ +.++|+++|+++.+++.++++++..| ..++.++.
T Consensus 67 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 146 (227)
T 2pbf_A 67 HALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH 146 (227)
T ss_dssp HHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE
Confidence 33445555 478899999999999999999999875 45799999999999999999999998 67899999
Q ss_pred ccCCCCC----CCCCCCCCccEEEEcCCCC
Q 013515 299 GDFLNLD----PKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 299 ~D~~~~~----~~~~~~~~fD~Il~DpPCS 324 (441)
+|+.... ... .+||+|++++++.
T Consensus 147 ~d~~~~~~~~~~~~---~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 147 KNIYQVNEEEKKEL---GLFDAIHVGASAS 173 (227)
T ss_dssp CCGGGCCHHHHHHH---CCEEEEEECSBBS
T ss_pred CChHhcccccCccC---CCcCEEEECCchH
Confidence 9998753 222 5799999998863
No 105
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.17 E-value=2.9e-10 Score=105.50 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Il 318 (441)
.++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++..|++|+.++++|+.++.+. .+ .++||.|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~-~~~~d~v~ 110 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIP-DNSLRMVQ 110 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSC-TTCEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcC-CCChheEE
Confidence 367899999999999999999875 4579999999999999999999999999999999998875210 10 26899999
Q ss_pred EcCC
Q 013515 319 LDPS 322 (441)
Q Consensus 319 ~DpP 322 (441)
+.-|
T Consensus 111 ~~~~ 114 (218)
T 3dxy_A 111 LFFP 114 (218)
T ss_dssp EESC
T ss_pred EeCC
Confidence 9744
No 106
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.17 E-value=2.4e-10 Score=107.44 Aligned_cols=123 Identities=13% Similarity=0.151 Sum_probs=94.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+.+|++|||+|||+|..++.++.. ++..+|+|+|+++.+++.+++|++++|+. +|++..+|..+..... .+||.|
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~---~~~D~I 94 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKK---DAIDTI 94 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG---GCCCEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCcc---ccccEE
Confidence 467899999999999999999886 44579999999999999999999999995 4999999998766431 359999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHH
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSV 396 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~ 396 (441)
++ .|.|- .+=..||..+...++ ++.+|-+.-+ +...|.+.
T Consensus 95 vi----agmGg------------------------------~lI~~IL~~~~~~L~~~~~lIlq~~~-----~~~~lr~~ 135 (244)
T 3gnl_A 95 VI----AGMGG------------------------------TLIRTILEEGAAKLAGVTKLILQPNI-----AAWQLREW 135 (244)
T ss_dssp EE----EEECH------------------------------HHHHHHHHHTGGGGTTCCEEEEEESS-----CHHHHHHH
T ss_pred EE----eCCch------------------------------HHHHHHHHHHHHHhCCCCEEEEEcCC-----ChHHHHHH
Confidence 87 23331 011467888887776 5788877532 67777777
Q ss_pred hchhcCCCeEE
Q 013515 397 LPIAMSFGFQL 407 (441)
Q Consensus 397 l~~~~~~~~~~ 407 (441)
|.. .+|.+
T Consensus 136 L~~---~Gf~i 143 (244)
T 3gnl_A 136 SEQ---NNWLI 143 (244)
T ss_dssp HHH---HTEEE
T ss_pred HHH---CCCEE
Confidence 743 35655
No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.16 E-value=9.8e-11 Score=109.18 Aligned_cols=79 Identities=25% Similarity=0.271 Sum_probs=67.1
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC----CCCCCCCCC
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN----LDPKDPAYS 312 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~----~~~~~~~~~ 312 (441)
+.+.++++|||+|||+|..+.+++...+ .++|+++|+++.+++.++++++.. +|+.++.+|+.. .+.. .
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~----~ 142 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIV----E 142 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTS----C
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccC----c
Confidence 3466899999999999999999999865 589999999999999999997765 689999999987 3321 5
Q ss_pred CccEEEEcCC
Q 013515 313 EVRAILLDPS 322 (441)
Q Consensus 313 ~fD~Il~DpP 322 (441)
.||+|+.|+|
T Consensus 143 ~~D~v~~~~~ 152 (230)
T 1fbn_A 143 KVDVIYEDVA 152 (230)
T ss_dssp CEEEEEECCC
T ss_pred cEEEEEEecC
Confidence 7999997765
No 108
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.16 E-value=2.3e-10 Score=103.79 Aligned_cols=136 Identities=15% Similarity=0.105 Sum_probs=92.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC----------
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------- 307 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~---------- 307 (441)
+.++.+|||+|||+|+.+..+++.+++ .++|+|+|+++.. ...++.++++|+.+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 568899999999999999999998753 5899999999831 245788999999876410
Q ss_pred -------------CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-
Q 013515 308 -------------DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG- 373 (441)
Q Consensus 308 -------------~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~- 373 (441)
. ...+||.|++|+++...|.. ..+......++..+|..+.++++
T Consensus 89 ~~~~~~~~~~~~~~-~~~~fD~v~~~~~~~~~g~~---------------------~~d~~~~~~~~~~~l~~~~~~Lkp 146 (201)
T 2plw_A 89 MNNNSVDYKLKEIL-QDKKIDIILSDAAVPCIGNK---------------------IDDHLNSCELTLSITHFMEQYINI 146 (201)
T ss_dssp ---CHHHHHHHHHH-TTCCEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ccchhhHHHHHhhc-CCCcccEEEeCCCcCCCCCc---------------------ccCHHHHHHHHHHHHHHHHHHccC
Confidence 0 11579999999876544421 12233445667889999999887
Q ss_pred CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEecCCCCC
Q 013515 374 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNG 414 (441)
Q Consensus 374 ~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~~~~~~~ 414 (441)
||.++.++.. .++...+...+.. .|..+......
T Consensus 147 gG~lv~~~~~---~~~~~~l~~~l~~----~f~~v~~~~~~ 180 (201)
T 2plw_A 147 GGTYIVKMYL---GSQTNNLKTYLKG----MFQLVHTTKPK 180 (201)
T ss_dssp EEEEEEEEEC---STTHHHHHHHHHT----TEEEEEECCCC
T ss_pred CCEEEEEEeC---CCCHHHHHHHHHH----HHheEEEECCc
Confidence 6887765432 3444455555531 35544443333
No 109
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.8e-10 Score=105.79 Aligned_cols=100 Identities=22% Similarity=0.210 Sum_probs=81.5
Q ss_pred CcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEecc
Q 013515 221 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGD 300 (441)
Q Consensus 221 g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D 300 (441)
|....+......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.+++++...|++++.+..+|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 136 (215)
T 2yxe_A 57 GQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD 136 (215)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC
T ss_pred CcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 34444444455666777888999999999999999999999875557999999999999999999999999889999999
Q ss_pred CCCCCCCCCCCCCccEEEEcCCC
Q 013515 301 FLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 301 ~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
+...... .++||+|+++.+.
T Consensus 137 ~~~~~~~---~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 137 GTLGYEP---LAPYDRIYTTAAG 156 (215)
T ss_dssp GGGCCGG---GCCEEEEEESSBB
T ss_pred cccCCCC---CCCeeEEEECCch
Confidence 8543322 2579999988664
No 110
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=108.23 Aligned_cols=84 Identities=25% Similarity=0.259 Sum_probs=69.3
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
+.+.+|++|||+|||+|..+.++++..++.++|+++|+++.+++.+.++++.. .+++++++|+.+........++||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEE
Confidence 44678999999999999999999998766689999999999999998888876 6899999999874310001257999
Q ss_pred EEEcCC
Q 013515 317 ILLDPS 322 (441)
Q Consensus 317 Il~DpP 322 (441)
|++|+|
T Consensus 151 V~~~~~ 156 (233)
T 2ipx_A 151 IFADVA 156 (233)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999988
No 111
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.15 E-value=3.8e-11 Score=113.26 Aligned_cols=118 Identities=15% Similarity=0.101 Sum_probs=84.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--------CCCcEEEEeccCCCCCCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--------GAANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--------g~~~v~~~~~D~~~~~~~~~~ 310 (441)
+.++.+|||+|||+|..+..++... +...|+++|+++.+++.++++++.+ |+.|+.++.+|+.+..+..-.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 3578899999999999999999885 3469999999999999999999987 888999999999873221101
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
.+.+|.|++.-|..-... + +.. .+ ..|..+|..+.++++ ||.|+.+|
T Consensus 126 ~~~~d~v~~~~p~p~~k~--~--------~~~---~r-----------~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQ--R--------KHK---AR-----------IITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TTCEEEEEEESCCCC----------------C---SS-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCEEEEECCCccccc--c--------hhH---Hh-----------hccHHHHHHHHHHcCCCCEEEEEe
Confidence 267899987655321110 0 000 00 013578888888887 67777654
No 112
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.15 E-value=6e-10 Score=112.18 Aligned_cols=106 Identities=20% Similarity=0.237 Sum_probs=83.6
Q ss_pred CChhhhcCcccccchh------hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC----------------------
Q 013515 214 VHPLIVNGCVFLQGKA------SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG---------------------- 265 (441)
Q Consensus 214 ~~~~~~~g~~~~Qd~s------s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~---------------------- 265 (441)
..++++.|+...|..+ +..++.+....++..|||.|||+|++++.++....+
T Consensus 162 G~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w 241 (385)
T 3ldu_A 162 GDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIW 241 (385)
T ss_dssp CSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHH
T ss_pred CChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHH
Confidence 3466777876666332 223334556678999999999999999998877432
Q ss_pred ---------------CcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 266 ---------------KGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 266 ---------------~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
..+|+++|+++.+++.+++|++.+|+. +|++.++|+.++... .+||+|++|||.
T Consensus 242 ~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~----~~~D~Iv~NPPy 311 (385)
T 3ldu_A 242 WDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE----DEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS----CBSCEEEECCCC
T ss_pred HHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC----CCCcEEEECCCC
Confidence 157999999999999999999999985 799999999987653 579999999995
No 113
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.15 E-value=5.5e-11 Score=112.30 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHh-cCCcEEEEEeCCHHHHHHHHHHHHHh---CCCc----------------------
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLS---GAAN---------------------- 293 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~-~~~~~V~a~D~~~~rl~~l~~~~~~~---g~~~---------------------- 293 (441)
.++.+|||+|||+|..+..++..+ .+..+|+++|+++.+++.+++++... |+.+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 467899999999999999999873 23468999999999999999998876 5532
Q ss_pred ----EE-------------EEeccCCCCCCC----CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHH
Q 013515 294 ----IE-------------VLHGDFLNLDPK----DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 352 (441)
Q Consensus 294 ----v~-------------~~~~D~~~~~~~----~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~ 352 (441)
+. +.++|+.+.... . ..+||+|++|||+.....+.+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~fD~Iv~npp~~~~~~~~~--------------------- 186 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLA--GSAPDVVLTDLPYGERTHWEG--------------------- 186 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHT--TCCCSEEEEECCGGGSSSSSS---------------------
T ss_pred hhhhhhhhccccccccccceeecccccccccccccC--CCCceEEEeCCCeeccccccc---------------------
Confidence 66 889998774320 1 147999999999754332110
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 353 RLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 353 ~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
......+..++..+.++++ ||.++++.++
T Consensus 187 --~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 187 --QVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp --CCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred --cccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 0112345677888888777 7888886555
No 114
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.14 E-value=2.9e-11 Score=112.26 Aligned_cols=127 Identities=13% Similarity=0.104 Sum_probs=95.8
Q ss_pred cccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEecc
Q 013515 222 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGD 300 (441)
Q Consensus 222 ~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D 300 (441)
.+.+......++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+ ++++++++|
T Consensus 50 ~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d 129 (229)
T 2avd_A 50 DSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP 129 (229)
T ss_dssp GGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC
Confidence 3445555555666666667789999999999999999998876568999999999999999999999998 689999999
Q ss_pred CCCCCCCCC---CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcE
Q 013515 301 FLNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VER 376 (441)
Q Consensus 301 ~~~~~~~~~---~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~ 376 (441)
+.+...... ..++||.|++|+|.. . +..++..+.++++ ||.
T Consensus 130 ~~~~~~~~~~~~~~~~~D~v~~d~~~~----------------------~-------------~~~~l~~~~~~L~pgG~ 174 (229)
T 2avd_A 130 ALETLDELLAAGEAGTFDVAVVDADKE----------------------N-------------CSAYYERCLQLLRPGGI 174 (229)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEECSCST----------------------T-------------HHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHhcCCCCCccEEEECCCHH----------------------H-------------HHHHHHHHHHHcCCCeE
Confidence 865421110 015799999998821 0 1356777777777 688
Q ss_pred EEEEcCC
Q 013515 377 VVYSTCS 383 (441)
Q Consensus 377 lvYsTCS 383 (441)
++...+.
T Consensus 175 lv~~~~~ 181 (229)
T 2avd_A 175 LAVLRVL 181 (229)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 8776554
No 115
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=8.8e-10 Score=111.20 Aligned_cols=106 Identities=13% Similarity=0.180 Sum_probs=83.8
Q ss_pred CChhhhcCcccccch------hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC----------------------
Q 013515 214 VHPLIVNGCVFLQGK------ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG---------------------- 265 (441)
Q Consensus 214 ~~~~~~~g~~~~Qd~------ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~---------------------- 265 (441)
..++++.||-..|.. -+..++.+.+..++..|||.|||+|++++.++....+
T Consensus 168 g~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w 247 (393)
T 3k0b_A 168 GAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVW 247 (393)
T ss_dssp SSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHH
T ss_pred CCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHH
Confidence 345666676544432 2333445667788999999999999999998876543
Q ss_pred ---------------CcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 266 ---------------KGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 266 ---------------~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
..+|+++|+++.+++.+++|++.+|+. +|.+.++|+.+++.. .+||+|++|||.
T Consensus 248 ~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~----~~fD~Iv~NPPY 317 (393)
T 3k0b_A 248 ADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE----DEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC----CCSCEEEECCCC
T ss_pred HHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC----CCCCEEEECCCC
Confidence 146999999999999999999999985 599999999987653 579999999996
No 116
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.13 E-value=8.2e-11 Score=109.37 Aligned_cols=99 Identities=23% Similarity=0.286 Sum_probs=79.3
Q ss_pred cccccchhhHHHHHHh--CCCCCCEEEEEcCCCchHHHHHHHHhcC-----CcEEEEEeCCHHHHHHHHHHHHHhC----
Q 013515 222 CVFLQGKASSMVAAAL--APKPGWKVLDACSAPGNKTVHLAALMKG-----KGKIVACELNKERVRRLKDTIKLSG---- 290 (441)
Q Consensus 222 ~~~~Qd~ss~l~~~~l--~~~~g~~VLDl~ag~G~kt~~la~~~~~-----~~~V~a~D~~~~rl~~l~~~~~~~g---- 290 (441)
..+.|......+...+ .+.++++|||+|||+|..+..++...+. .++|+++|+++.+++.++++++..|
T Consensus 63 ~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 142 (227)
T 1r18_A 63 VTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML 142 (227)
T ss_dssp EEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcccc
Confidence 3444555455566666 4788999999999999999999997653 3699999999999999999999877
Q ss_pred -CCcEEEEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 291 -AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 291 -~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
..++.++.+|+....+. ...||+|+++.++
T Consensus 143 ~~~~v~~~~~d~~~~~~~---~~~fD~I~~~~~~ 173 (227)
T 1r18_A 143 DSGQLLIVEGDGRKGYPP---NAPYNAIHVGAAA 173 (227)
T ss_dssp HHTSEEEEESCGGGCCGG---GCSEEEEEECSCB
T ss_pred CCCceEEEECCcccCCCc---CCCccEEEECCch
Confidence 67899999999873222 2579999999885
No 117
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.13 E-value=2e-10 Score=107.39 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=81.6
Q ss_pred hcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 013515 219 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 298 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~ 298 (441)
..|....+......+...+.+.++.+|||+|||+|..+..++...+ .+|+++|+++.+++.++++++..|+.++.+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 146 (235)
T 1jg1_A 69 PAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL 146 (235)
T ss_dssp STTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3455556666666777778889999999999999999999999864 78999999999999999999999998899999
Q ss_pred ccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 299 GDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 299 ~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
+|+.. .... ...||+|+++.+.
T Consensus 147 ~d~~~-~~~~--~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 147 GDGSK-GFPP--KAPYDVIIVTAGA 168 (235)
T ss_dssp SCGGG-CCGG--GCCEEEEEECSBB
T ss_pred CCccc-CCCC--CCCccEEEECCcH
Confidence 99832 2221 1459999998764
No 118
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.13 E-value=2.8e-10 Score=111.50 Aligned_cols=97 Identities=18% Similarity=0.219 Sum_probs=82.7
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
.|......+...+++++|++|||+|||+|..+..+++.....++|+++|+++.+++.++++++..|+.++.+..+|+.+.
T Consensus 59 ~~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 59 SQPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 34455666777788899999999999999999999998654578999999999999999999999998899999999875
Q ss_pred CCCCCCCCCccEEEEcCCCC
Q 013515 305 DPKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCS 324 (441)
.+.. ++||+|++++++.
T Consensus 139 ~~~~---~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 139 VPEF---SPYDVIFVTVGVD 155 (317)
T ss_dssp CGGG---CCEEEEEECSBBS
T ss_pred cccC---CCeEEEEEcCCHH
Confidence 5432 6799999998864
No 119
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=108.17 Aligned_cols=136 Identities=14% Similarity=0.060 Sum_probs=91.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHH------hCCCcEEEEeccCCC-CC--CCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL------SGAANIEVLHGDFLN-LD--PKDP 309 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~------~g~~~v~~~~~D~~~-~~--~~~~ 309 (441)
..++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++. .+..||.++++|+.. ++ ...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~- 121 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK- 121 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT-
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC-
Confidence 3467799999999999999999875 457999999999999999998875 467899999999987 43 222
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChh
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVE 388 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~E 388 (441)
++||.|++.-|.. ..+ .+|. .-...+..+|..+.+.|+ ||.|+.+|+.
T Consensus 122 --~~~D~v~~~~~dp---------~~k-~~h~--------------krr~~~~~~l~~~~~~LkpGG~l~~~td~----- 170 (235)
T 3ckk_A 122 --GQLTKMFFLFPDP---------HFK-RTKH--------------KWRIISPTLLAEYAYVLRVGGLVYTITDV----- 170 (235)
T ss_dssp --TCEEEEEEESCC-----------------------------------CCCHHHHHHHHHHEEEEEEEEEEESC-----
T ss_pred --cCeeEEEEeCCCc---------hhh-hhhh--------------hhhhhhHHHHHHHHHHCCCCCEEEEEeCC-----
Confidence 6799998865521 000 0000 000123467888888777 7888887763
Q ss_pred cHHHHHHHhchh-cCCCeEEe
Q 013515 389 NEDVIKSVLPIA-MSFGFQLA 408 (441)
Q Consensus 389 Ne~vV~~~l~~~-~~~~~~~~ 408 (441)
+..+.++++.. .++.|+..
T Consensus 171 -~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 171 -LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp -HHHHHHHHHHHHTSTTEEEE
T ss_pred -HHHHHHHHHHHHHCCCcccc
Confidence 34444444322 24457765
No 120
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.12 E-value=1.8e-10 Score=101.36 Aligned_cols=121 Identities=26% Similarity=0.316 Sum_probs=88.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC--------CCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD--------PKDPA 310 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~--------~~~~~ 310 (441)
+.++.+|||+|||+|..+..+++.+++..+++++|+++ +++ ..++.+.++|+.+.+ ...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~-- 86 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVGD-- 86 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHTT--
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCCC--
Confidence 67899999999999999999999875557999999998 653 257899999998764 222
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhc
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVEN 389 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~EN 389 (441)
++||.|++|+|+...|.. ..+.......+..++..+.++++ +|.++.++. ..++
T Consensus 87 -~~~D~i~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~---~~~~ 141 (180)
T 1ej0_A 87 -SKVQVVMSDMAPNMSGTP---------------------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF---QGEG 141 (180)
T ss_dssp -CCEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE---SSTT
T ss_pred -CceeEEEECCCccccCCC---------------------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe---cCCc
Confidence 579999999998766531 12223344556888999988887 677776543 2334
Q ss_pred HHHHHHHh
Q 013515 390 EDVIKSVL 397 (441)
Q Consensus 390 e~vV~~~l 397 (441)
...+...+
T Consensus 142 ~~~~~~~~ 149 (180)
T 1ej0_A 142 FDEYLREI 149 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444455
No 121
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.11 E-value=1.8e-10 Score=116.88 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=97.9
Q ss_pred hcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 013515 219 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 298 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~ 298 (441)
..|.++-.+.-...++..+.+.++.+|||+|||+|+.+..+++..+....|+|+|+++.+++.+ .++.+++
T Consensus 17 ~~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~ 87 (421)
T 2ih2_A 17 SLGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGIL 87 (421)
T ss_dssp ----CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEE
T ss_pred cCceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEe
Confidence 3455665566677777788766678999999999999999998864457999999999998766 4789999
Q ss_pred ccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHH----------HHHHHHHHHHH
Q 013515 299 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL----------SAFQKKALRHA 368 (441)
Q Consensus 299 ~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l----------~~~Q~~lL~~a 368 (441)
+|+...... ++||+|+.+||+...+...+-. .+ ...+....+ ...+..++.++
T Consensus 88 ~D~~~~~~~----~~fD~Ii~NPPy~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 150 (421)
T 2ih2_A 88 ADFLLWEPG----EAFDLILGNPPYGIVGEASKYP-----IH--------VFKAVKDLYKKAFSTWKGKYNLYGAFLEKA 150 (421)
T ss_dssp SCGGGCCCS----SCEEEEEECCCCCCBSCTTTCS-----BC--------CCHHHHHHHHHHCTTCCTTCCHHHHHHHHH
T ss_pred CChhhcCcc----CCCCEEEECcCccCcccccccc-----cc--------cCHHHHHHHHHhhhcccCCccHHHHHHHHH
Confidence 999876532 6799999999998765421100 00 001111111 12566889999
Q ss_pred hCCCC-CcEEEEEcCC
Q 013515 369 LSFPG-VERVVYSTCS 383 (441)
Q Consensus 369 ~~~~~-~G~lvYsTCS 383 (441)
.++++ +|.+++.+++
T Consensus 151 ~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 151 VRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHEEEEEEEEEEEEG
T ss_pred HHHhCCCCEEEEEECh
Confidence 99887 7888888765
No 122
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.10 E-value=6e-10 Score=101.85 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=88.4
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~ 308 (441)
...+...+.+.++ +|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..|+ .++.++++|+.+++...
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 3444556666667 9999999999999999987 347999999999999999999999997 47999999999877443
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
++||.|++...... -+| ...+|..+.+.++ ||.++.++.
T Consensus 110 ---~~~D~v~~~~~l~~------~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 110 ---NYADLIVSRGSVFF------WED--------------------------VATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp ---TCEEEEEEESCGGG------CSC--------------------------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---ccccEEEECchHhh------ccC--------------------------HHHHHHHHHHhCCCCCEEEEEec
Confidence 68999997654211 011 1357788888777 677777643
No 123
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.10 E-value=7.8e-11 Score=103.73 Aligned_cols=80 Identities=19% Similarity=0.211 Sum_probs=66.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCCccEEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSEVRAILL 319 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~Il~ 319 (441)
++.+|||+|||+|..+..++... ..|+++|+++.+++.++++++..++ +++++++|+.+..... ...++||.|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 78899999999999999998862 3499999999999999999999998 8999999987743211 00137999999
Q ss_pred cCCCC
Q 013515 320 DPSCS 324 (441)
Q Consensus 320 DpPCS 324 (441)
|||..
T Consensus 117 ~~~~~ 121 (171)
T 1ws6_A 117 APPYA 121 (171)
T ss_dssp CCCTT
T ss_pred CCCCc
Confidence 99965
No 124
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.10 E-value=7.6e-10 Score=107.31 Aligned_cols=126 Identities=15% Similarity=0.135 Sum_probs=94.1
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCC
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDP 309 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 309 (441)
..+...+.+.+|.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...|+. ++.++.+|+.++ .
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~- 135 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D- 135 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C-
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C-
Confidence 3455667788999999999999999999998864 68999999999999999999999985 899999999876 2
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCh
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQV 387 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ 387 (441)
++||+|++.. ++..-||.. ..... .....++..+.++++ ||.++.++.+....
T Consensus 136 --~~fD~v~~~~------~~~~~~d~~----------~~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 189 (302)
T 3hem_A 136 --EPVDRIVSLG------AFEHFADGA----------GDAGF-------ERYDTFFKKFYNLTPDDGRMLLHTITIPDK 189 (302)
T ss_dssp --CCCSEEEEES------CGGGTTCCS----------SCCCT-------THHHHHHHHHHHSSCTTCEEEEEEEECCCH
T ss_pred --CCccEEEEcc------hHHhcCccc----------cccch-------hHHHHHHHHHHHhcCCCcEEEEEEEeccCc
Confidence 6799999652 222222210 00000 112467888888887 78888887765543
No 125
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.10 E-value=1e-09 Score=110.34 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=82.9
Q ss_pred CChhhhcCcccccchh------hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC----------------------
Q 013515 214 VHPLIVNGCVFLQGKA------SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG---------------------- 265 (441)
Q Consensus 214 ~~~~~~~g~~~~Qd~s------s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~---------------------- 265 (441)
..++++-||-..|..+ +..++.+.+..+++.|+|.+||+|++.+.++....+
T Consensus 161 g~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w 240 (384)
T 3ldg_A 161 GPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALV 240 (384)
T ss_dssp SSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHH
T ss_pred CCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHH
Confidence 3456677765544332 233445566788999999999999999988876543
Q ss_pred ---------------CcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 266 ---------------KGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 266 ---------------~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
..+|+++|+++.+++.+++|++.+|+. .|++.++|+.+++.. .+||.|++|||+
T Consensus 241 ~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~----~~fD~Iv~NPPY 310 (384)
T 3ldg_A 241 TRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN----KINGVLISNPPY 310 (384)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC----CCSCEEEECCCC
T ss_pred HHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc----CCcCEEEECCch
Confidence 146999999999999999999999986 599999999988653 479999999997
No 126
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.10 E-value=1e-09 Score=103.58 Aligned_cols=86 Identities=12% Similarity=0.018 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCC-CCCCCC--CCCccE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNL-DPKDPA--YSEVRA 316 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~D~~~~-~~~~~~--~~~fD~ 316 (441)
++.+|||+|||+|..+..++.... ..+|+++|+++.+++.++++++.+|+.+ ++++++|+.+. ....+. .++||.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 578999999999999999988764 3799999999999999999999999864 99999998762 211110 147999
Q ss_pred EEEcCCCCCCc
Q 013515 317 ILLDPSCSGSG 327 (441)
Q Consensus 317 Il~DpPCSg~G 327 (441)
|++|||+...+
T Consensus 144 i~~npp~~~~~ 154 (254)
T 2h00_A 144 CMCNPPFFANQ 154 (254)
T ss_dssp EEECCCCC---
T ss_pred EEECCCCccCc
Confidence 99999998665
No 127
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.10 E-value=6.9e-11 Score=110.84 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=94.9
Q ss_pred cccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCC
Q 013515 224 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFL 302 (441)
Q Consensus 224 ~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~D~~ 302 (441)
.++.....++..++...++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+.+ +.++.+|+.
T Consensus 43 ~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 43 QISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 4555566666677777789999999999999999999987656899999999999999999999999865 999999986
Q ss_pred CCCCCC-------------CCC-CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 013515 303 NLDPKD-------------PAY-SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 368 (441)
Q Consensus 303 ~~~~~~-------------~~~-~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a 368 (441)
+..+.. +.. ++||.|++|... ++ . ..++..+
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~---------~~----------------~----------~~~l~~~ 167 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK---------EN----------------Y----------PNYYPLI 167 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG---------GG----------------H----------HHHHHHH
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCCH---------HH----------------H----------HHHHHHH
Confidence 532110 001 469999998531 00 0 2457777
Q ss_pred hCCCC-CcEEEEEcCCC
Q 013515 369 LSFPG-VERVVYSTCSI 384 (441)
Q Consensus 369 ~~~~~-~G~lvYsTCS~ 384 (441)
.++++ ||.++..++..
T Consensus 168 ~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 168 LKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHEEEEEEEEEECSSG
T ss_pred HHHcCCCeEEEEEcccc
Confidence 77776 78888877554
No 128
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.09 E-value=1.1e-09 Score=104.24 Aligned_cols=118 Identities=19% Similarity=0.207 Sum_probs=92.0
Q ss_pred hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCC
Q 013515 229 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPK 307 (441)
Q Consensus 229 ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~ 307 (441)
-...+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++...|+. ++.++.+|+.+++..
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 34455566778899999999999999999999875 379999999999999999999999874 799999999987654
Q ss_pred CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 308 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+ ++||+|++... +..-+| + ..+|..+.+.++ ||.++.++..
T Consensus 127 ~---~~fD~v~~~~~------l~~~~~----------------~----------~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 127 D---ASFDAVWALES------LHHMPD----------------R----------GRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp T---TCEEEEEEESC------TTTSSC----------------H----------HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred C---CCccEEEEech------hhhCCC----------------H----------HHHHHHHHHHcCCCeEEEEEEee
Confidence 3 68999986322 211111 1 367888888887 6888777654
No 129
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.09 E-value=2.2e-10 Score=120.24 Aligned_cols=159 Identities=15% Similarity=0.122 Sum_probs=110.0
Q ss_pred hcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCC-----------------cEEEEEeCCHHHHHH
Q 013515 219 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK-----------------GKIVACELNKERVRR 281 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~-----------------~~V~a~D~~~~rl~~ 281 (441)
..|.|+--+.-+.+++.++.+.+|.+|+|.|||+|++.+.++..+... ..++|+|+++.+++.
T Consensus 147 ~~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp ---CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred cCCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 346666555667778889999999999999999999999998876421 379999999999999
Q ss_pred HHHHHHHhCCCc-----EEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHH
Q 013515 282 LKDTIKLSGAAN-----IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK 356 (441)
Q Consensus 282 l~~~~~~~g~~~-----v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~ 356 (441)
++.|+...|+.+ +.+.++|+...+... ..+||+|+.|||+++......+.+...+ .
T Consensus 227 A~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~--~~~fD~Vv~NPPf~~~~~~~~~~~~~~~----------~------- 287 (541)
T 2ar0_A 227 ALMNCLLHDIEGNLDHGGAIRLGNTLGSDGEN--LPKAHIVATNPPFGSAAGTNITRTFVHP----------T------- 287 (541)
T ss_dssp HHHHHHTTTCCCBGGGTBSEEESCTTSHHHHT--SCCEEEEEECCCCTTCSSCCCCSCCSSC----------C-------
T ss_pred HHHHHHHhCCCccccccCCeEeCCCccccccc--ccCCeEEEECCCcccccchhhHhhcCCC----------C-------
Confidence 999999888875 788999987654211 2579999999999876532211111000 0
Q ss_pred HHHHHHHHHHHHhCCCC-CcEEEEEcCC--CCChhcHHHHHHHh
Q 013515 357 LSAFQKKALRHALSFPG-VERVVYSTCS--IHQVENEDVIKSVL 397 (441)
Q Consensus 357 l~~~Q~~lL~~a~~~~~-~G~lvYsTCS--~~~~ENe~vV~~~l 397 (441)
...+...+.+++++++ +|++++.+.. ++....+..+.+.|
T Consensus 288 -~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L 330 (541)
T 2ar0_A 288 -SNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDL 330 (541)
T ss_dssp -SCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHHHHHH
T ss_pred -CchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHHHHHH
Confidence 1123467888888777 6877766542 22322345565544
No 130
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.09 E-value=3.1e-10 Score=105.35 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=78.7
Q ss_pred cCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec
Q 013515 220 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 299 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~ 299 (441)
.|....+......+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++...| ++.++++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 34445555556667777888899999999999999999999873 699999999999999999998877 8999999
Q ss_pred cCCCCCCCCCCCCCccEEEEcCCC
Q 013515 300 DFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
|+....+. .++||+|+++.++
T Consensus 124 d~~~~~~~---~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 124 DGTLGYEE---EKPYDRVVVWATA 144 (231)
T ss_dssp CGGGCCGG---GCCEEEEEESSBB
T ss_pred Cccccccc---CCCccEEEECCcH
Confidence 99873322 2679999998764
No 131
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.09 E-value=2.8e-10 Score=101.13 Aligned_cols=81 Identities=20% Similarity=0.229 Sum_probs=64.2
Q ss_pred chhhHHHHHHhCC--CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 227 GKASSMVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 227 d~ss~l~~~~l~~--~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
...+.+++..++. .++.+|||+|||+|..+..++... +|+|+|+++.+++. ..+++++++|+.+.
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~ 73 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADLLCS 73 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECSTTTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECChhhh
Confidence 3445555555655 678899999999999999888752 99999999999987 35688999999873
Q ss_pred CCCCCCCCCccEEEEcCCCC
Q 013515 305 DPKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCS 324 (441)
.. . ++||.|+++||..
T Consensus 74 ~~-~---~~fD~i~~n~~~~ 89 (170)
T 3q87_B 74 IN-Q---ESVDVVVFNPPYV 89 (170)
T ss_dssp BC-G---GGCSEEEECCCCB
T ss_pred cc-c---CCCCEEEECCCCc
Confidence 22 1 6899999999964
No 132
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.08 E-value=8e-10 Score=99.65 Aligned_cols=87 Identities=22% Similarity=0.141 Sum_probs=74.1
Q ss_pred hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC
Q 013515 229 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 229 ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~ 308 (441)
....+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..+++++.++.+|+.+++. .
T Consensus 20 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~ 95 (199)
T 2xvm_A 20 THSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-D 95 (199)
T ss_dssp CCHHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-C
T ss_pred ccHHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-C
Confidence 3445566777778899999999999999999886 36999999999999999999999998889999999988765 2
Q ss_pred CCCCCccEEEEcCC
Q 013515 309 PAYSEVRAILLDPS 322 (441)
Q Consensus 309 ~~~~~fD~Il~DpP 322 (441)
++||.|++...
T Consensus 96 ---~~~D~v~~~~~ 106 (199)
T 2xvm_A 96 ---RQYDFILSTVV 106 (199)
T ss_dssp ---CCEEEEEEESC
T ss_pred ---CCceEEEEcch
Confidence 68999997543
No 133
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.06 E-value=1.3e-09 Score=99.19 Aligned_cols=119 Identities=16% Similarity=0.223 Sum_probs=90.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++..|+.++.+.++|+.+..+. ++||.|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSE----PPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCC----SCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCcc----CCcCEEEEe
Confidence 47899999999999999999875 3579999999999999999999999998899999999887632 679999964
Q ss_pred CCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHhch
Q 013515 321 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVLPI 399 (441)
Q Consensus 321 pPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~ 399 (441)
.- . . ...++..+.++++ ||.++...... .++.+..++
T Consensus 140 ~~----~-------------------~-------------~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~-- 177 (207)
T 1jsx_A 140 AF----A-------------------S-------------LNDMVSWCHHLPGEQGRFYALKGQM----PEDEIALLP-- 177 (207)
T ss_dssp CS----S-------------------S-------------HHHHHHHHTTSEEEEEEEEEEESSC----CHHHHHTSC--
T ss_pred cc----C-------------------C-------------HHHHHHHHHHhcCCCcEEEEEeCCC----chHHHHHHh--
Confidence 21 0 0 1367888888887 67777664432 233344443
Q ss_pred hcCCCeEEec
Q 013515 400 AMSFGFQLAT 409 (441)
Q Consensus 400 ~~~~~~~~~~ 409 (441)
. +|+++.
T Consensus 178 --~-g~~~~~ 184 (207)
T 1jsx_A 178 --E-EYQVES 184 (207)
T ss_dssp --T-TEEEEE
T ss_pred --c-CCceee
Confidence 2 777655
No 134
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.04 E-value=1e-09 Score=108.77 Aligned_cols=135 Identities=18% Similarity=0.241 Sum_probs=102.9
Q ss_pred chhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 013515 227 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 306 (441)
Q Consensus 227 d~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~ 306 (441)
|..+.++...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+++. ++++.+|+....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~- 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV- 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC-
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc-
Confidence 4567788888877778899999999999999999874 4469999999999999999999998875 567889987643
Q ss_pred CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 307 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 307 ~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
. ++||.|+++||... |. . ........++..+.+.++ ||.++.++++..
T Consensus 259 -~---~~fD~Iv~~~~~~~-g~----------------------~----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 259 -K---GRFDMIISNPPFHD-GM----------------------Q----TSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp -C---SCEEEEEECCCCCS-SS----------------------H----HHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred -c---CCeeEEEECCCccc-Cc----------------------c----CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 2 67999999999531 11 0 011234578999999887 788888888766
Q ss_pred ChhcHHHHHHHh
Q 013515 386 QVENEDVIKSVL 397 (441)
Q Consensus 386 ~~ENe~vV~~~l 397 (441)
+.+ .......
T Consensus 308 ~~~--~~l~~~f 317 (343)
T 2pjd_A 308 PYP--DVLDETF 317 (343)
T ss_dssp SHH--HHHHHHH
T ss_pred CcH--HHHHHhc
Confidence 543 3444444
No 135
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.04 E-value=7.6e-10 Score=106.49 Aligned_cols=119 Identities=11% Similarity=0.077 Sum_probs=91.5
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
..+.+...+....++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...+. +++++++|+.+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~ 87 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELN 87 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCS
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcC
Confidence 3344444455677899999999999999999998865457999999999999999999988776 899999999987652
Q ss_pred CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 308 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
++||.|++.... +.+ +| . ..+|..+.+.++ ||.++.....
T Consensus 88 ----~~fD~v~~~~~l---~~~---~~----------------~----------~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 ----DKYDIAICHAFL---LHM---TT----------------P----------ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----SCEEEEEEESCG---GGC---SS----------------H----------HHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----CCeeEEEECChh---hcC---CC----------------H----------HHHHHHHHHHcCCCCEEEEEecc
Confidence 689999975431 111 11 1 367888888887 6877766554
No 136
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.04 E-value=9.9e-10 Score=101.02 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=87.7
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeccCCCC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-----NIEVLHGDFLNL 304 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-----~v~~~~~D~~~~ 304 (441)
...+...+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...|+. ++.++++|+...
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 3445556666788999999999999999998863 3469999999999999999999888775 799999998655
Q ss_pred CCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 305 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
+... ++||.|++.-. +.. .... ....+|+.+.+.++ ||.++.+.+
T Consensus 97 ~~~~---~~fD~v~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 97 DKRF---HGYDAATVIEV------IEH-----------------LDLS-------RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CGGG---CSCSEEEEESC------GGG-----------------CCHH-------HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccC---CCcCEEeeHHH------HHc-----------------CCHH-------HHHHHHHHHHHHcCCCEEEEEccC
Confidence 4332 68999995322 211 0111 12467888888887 676665554
No 137
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.03 E-value=1.1e-09 Score=99.38 Aligned_cols=73 Identities=15% Similarity=0.286 Sum_probs=63.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
.+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++. +++++++|+.+++ ++||.|
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~------~~~D~v 114 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS------GKYDTW 114 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC------CCEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC------CCeeEE
Confidence 4567899999999999999999876 34689999999999999999875 6789999998864 579999
Q ss_pred EEcCCC
Q 013515 318 LLDPSC 323 (441)
Q Consensus 318 l~DpPC 323 (441)
++|||.
T Consensus 115 ~~~~p~ 120 (200)
T 1ne2_A 115 IMNPPF 120 (200)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999995
No 138
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.03 E-value=1.8e-10 Score=116.27 Aligned_cols=82 Identities=23% Similarity=0.270 Sum_probs=69.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+|.+|||+|||+|..++.++.. ..+|+++|+++.+++.+++|++.+ |+++++++++|+.++.... ...+||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~-~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI-KTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH-HHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc-cCCCceEEE
Confidence 5899999999999999988875 369999999999999999999999 9889999999998753210 014799999
Q ss_pred EcCCCCCC
Q 013515 319 LDPSCSGS 326 (441)
Q Consensus 319 ~DpPCSg~ 326 (441)
+|||..+.
T Consensus 169 lDPPrr~~ 176 (410)
T 3ll7_A 169 VDPARRSG 176 (410)
T ss_dssp ECCEEC--
T ss_pred ECCCCcCC
Confidence 99998874
No 139
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.03 E-value=2e-10 Score=107.71 Aligned_cols=112 Identities=17% Similarity=0.107 Sum_probs=84.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..+|.+|||+|||+|..+.++++.. ...|+++|+++.+++.++++.+..+. +++++.+|+..+....+ .++||.|+
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~~-~~~FD~i~ 133 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTLP-DGHFDGIL 133 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGSC-TTCEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhccccc-ccCCceEE
Confidence 3679999999999999999988753 25899999999999999999988774 68889999876543322 26799999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
.|+..+...... . .....+++++.++|| ||+++|.+
T Consensus 134 ~D~~~~~~~~~~-~--------------------------~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 134 YDTYPLSEETWH-T--------------------------HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ECCCCCBGGGTT-T--------------------------HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred Eeeeecccchhh-h--------------------------cchhhhhhhhhheeCCCCEEEEEe
Confidence 998755433221 0 112467788888887 78888854
No 140
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.02 E-value=1.3e-09 Score=98.43 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=81.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCC--------cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eccCCCCCCC--
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGK--------GKIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPK-- 307 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~--------~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~-~~D~~~~~~~-- 307 (441)
+.+|.+|||+|||+|..+..+++.++.. ++|+++|+++.+ +..+++++ .+|+......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 5789999999999999999999987543 799999999831 34578888 8888764310
Q ss_pred ---CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 308 ---DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 308 ---~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
.....+||+|++|+++..+|.. ..+......++..++..+.++++ ||.++.+++.
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFR---------------------DLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCc---------------------ccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 0001479999999876555531 11222344566788999998887 7888877653
No 141
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.01 E-value=2.3e-09 Score=103.42 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=92.0
Q ss_pred cchhhHHHHHHh----CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEecc
Q 013515 226 QGKASSMVAAAL----APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGD 300 (441)
Q Consensus 226 Qd~ss~l~~~~l----~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D 300 (441)
|......+...+ ...++.+|||+|||+|..+..++...+ .+|+++|+++.+++.++++++..|+ +++.++++|
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 140 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC
Confidence 333344555566 778899999999999999999998762 5999999999999999999999998 579999999
Q ss_pred CCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEE
Q 013515 301 FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVY 379 (441)
Q Consensus 301 ~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvY 379 (441)
+.+++..+ ++||+|++.- ++..-+| ...+|..+.+.++ ||.++.
T Consensus 141 ~~~~~~~~---~~fD~v~~~~------~l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 141 FLEIPCED---NSYDFIWSQD------AFLHSPD--------------------------KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp TTSCSSCT---TCEEEEEEES------CGGGCSC--------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCCC---CCEeEEEecc------hhhhcCC--------------------------HHHHHHHHHHHcCCCeEEEE
Confidence 99877543 6899998632 2211111 1467778878777 688877
Q ss_pred EcCC
Q 013515 380 STCS 383 (441)
Q Consensus 380 sTCS 383 (441)
++..
T Consensus 186 ~~~~ 189 (297)
T 2o57_A 186 TDPM 189 (297)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7643
No 142
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.00 E-value=1.2e-09 Score=105.93 Aligned_cols=94 Identities=17% Similarity=0.150 Sum_probs=79.2
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|.....-...++..+++.++++|||+|||+|..|..+++. ..+|+|+|+++.+++.++++++ +.++++++++|+.
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 4444445666777888999999999999999999999987 3799999999999999999988 3468999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCC
Q 013515 303 NLDPKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCS 324 (441)
+++... ..||.|+.++|..
T Consensus 107 ~~~~~~---~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 107 KVDLNK---LDFNKVVANLPYQ 125 (295)
T ss_dssp TSCGGG---SCCSEEEEECCGG
T ss_pred hCCccc---CCccEEEEeCccc
Confidence 876543 4699999999964
No 143
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.00 E-value=1.3e-09 Score=99.89 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=95.8
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.-..++...+...++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++...+ +++++++|+.++++.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFSTA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCCS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCCC
Confidence 344556667777888999999999999999998762 589999999999999999987654 899999999988732
Q ss_pred CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC----
Q 013515 308 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC---- 382 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC---- 382 (441)
++||.|++.. ++..-+ +++. ...+|..+.+.++ ||.++.+|.
T Consensus 113 ----~~fD~v~~~~------~l~~~~----------------~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~ 159 (216)
T 3ofk_A 113 ----ELFDLIVVAE------VLYYLE----------------DMTQ-------MRTAIDNMVKMLAPGGHLVFGSARDAT 159 (216)
T ss_dssp ----CCEEEEEEES------CGGGSS----------------SHHH-------HHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred ----CCccEEEEcc------HHHhCC----------------CHHH-------HHHHHHHHHHHcCCCCEEEEEecCCCc
Confidence 7899999742 221111 1111 2467888888887 688887652
Q ss_pred --CCCChhcHHHHHHHhc
Q 013515 383 --SIHQVENEDVIKSVLP 398 (441)
Q Consensus 383 --S~~~~ENe~vV~~~l~ 398 (441)
.+....+.+.+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~ 177 (216)
T 3ofk_A 160 CRRWGHVAGAETVITILT 177 (216)
T ss_dssp HHHTTCSCCHHHHHHHHH
T ss_pred chhhhhhhhHHHHHHHHH
Confidence 2333455555656653
No 144
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.00 E-value=4e-09 Score=101.24 Aligned_cols=115 Identities=15% Similarity=0.113 Sum_probs=86.6
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~ 310 (441)
.+...+.+.+|.+|||+|||+|..+..+++..+ .+|+++|+++.+++.++++++..|+ .++.+..+|+.+++
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----- 127 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----- 127 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-----
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-----
Confidence 344456678899999999999999999996653 4999999999999999999998887 47999999997664
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
++||+|++.- ++..-++ .....+|..+.+.++ ||.++.++.+.
T Consensus 128 -~~fD~v~~~~------~l~~~~~------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 -EPVDRIVSIG------AFEHFGH------------------------ERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp -CCCSEEEEES------CGGGTCT------------------------TTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred -CCeeEEEEeC------chhhcCh------------------------HHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 5699998632 2211100 001466777777776 78888776554
No 145
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.00 E-value=9.9e-10 Score=108.78 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=69.9
Q ss_pred HHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCC
Q 013515 235 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
..+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ ++|+++.+|+.+++... ++
T Consensus 58 ~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~ 131 (340)
T 2fyt_A 58 QNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV---EK 131 (340)
T ss_dssp HCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC---SC
T ss_pred hhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCC---Cc
Confidence 3445678999999999999999998886 346999999997 99999999999998 78999999999876443 67
Q ss_pred ccEEEEcCC
Q 013515 314 VRAILLDPS 322 (441)
Q Consensus 314 fD~Il~DpP 322 (441)
||+|++++.
T Consensus 132 ~D~Ivs~~~ 140 (340)
T 2fyt_A 132 VDVIISEWM 140 (340)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCc
Confidence 999998863
No 146
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.00 E-value=1.5e-09 Score=108.73 Aligned_cols=91 Identities=15% Similarity=0.146 Sum_probs=73.8
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHH-------HHhCC--CcEEEEeccC
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI-------KLSGA--ANIEVLHGDF 301 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~-------~~~g~--~~v~~~~~D~ 301 (441)
..+...+++.+|++|||+|||+|..++.++... +..+|+|+|+++.+++.+++++ +.+|+ .+|+++++|+
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~ 241 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc
Confidence 345567788999999999999999999998875 4467999999999999998765 44675 6899999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCC
Q 013515 302 LNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 302 ~~~~~~~~~~~~fD~Il~DpPC 323 (441)
.+++..+ .+..||+|+++++|
T Consensus 242 ~~lp~~d-~~~~aDVVf~Nn~~ 262 (438)
T 3uwp_A 242 LSEEWRE-RIANTSVIFVNNFA 262 (438)
T ss_dssp TSHHHHH-HHHTCSEEEECCTT
T ss_pred cCCcccc-ccCCccEEEEcccc
Confidence 9876421 12468999999886
No 147
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.99 E-value=3.6e-10 Score=105.66 Aligned_cols=112 Identities=15% Similarity=0.095 Sum_probs=82.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC--CCCCCCCCCccE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL--DPKDPAYSEVRA 316 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~--~~~~~~~~~fD~ 316 (441)
+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++.+..+ .++.++++|+.++ +..+ ++||.
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~---~~fD~ 131 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPD---GHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCT---TCEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCC---CceEE
Confidence 568899999999999999998654 22489999999999999999988877 5899999999887 4333 68999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|++|.- +. .. ++. .. .....++..+.++|+ ||.+++..++
T Consensus 132 V~~d~~--~~-~~---~~~--------------~~-------~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 132 ILYDTY--PL-SE---ETW--------------HT-------HQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp EEECCC--CC-BG---GGT--------------TT-------HHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred EEECCc--cc-ch---hhh--------------hh-------hhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 999721 11 11 110 00 112356788888777 7888876554
No 148
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.99 E-value=2.1e-09 Score=102.40 Aligned_cols=95 Identities=17% Similarity=0.186 Sum_probs=75.6
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHH------HHHHHHHHHHHhCC-CcEEEE
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE------RVRRLKDTIKLSGA-ANIEVL 297 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~------rl~~l~~~~~~~g~-~~v~~~ 297 (441)
.|......+...+.+.+|.+|||+|||+|..+..++...++..+|+++|+++. +++.++++++..|+ +++++.
T Consensus 27 ~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~ 106 (275)
T 3bkx_A 27 RQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVH 106 (275)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEE
Confidence 34444556666778889999999999999999999998755579999999997 99999999998887 689999
Q ss_pred ecc-C--CCCCCCCCCCCCccEEEEcCC
Q 013515 298 HGD-F--LNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 298 ~~D-~--~~~~~~~~~~~~fD~Il~DpP 322 (441)
.+| . ..++... ++||.|++...
T Consensus 107 ~~d~~~~~~~~~~~---~~fD~v~~~~~ 131 (275)
T 3bkx_A 107 FNTNLSDDLGPIAD---QHFDRVVLAHS 131 (275)
T ss_dssp CSCCTTTCCGGGTT---CCCSEEEEESC
T ss_pred ECChhhhccCCCCC---CCEEEEEEccc
Confidence 998 3 2222222 67999997544
No 149
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.98 E-value=2e-09 Score=99.01 Aligned_cols=86 Identities=21% Similarity=0.210 Sum_probs=70.3
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeccCCCC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-----NIEVLHGDFLNL 304 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-----~v~~~~~D~~~~ 304 (441)
...+...+...++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...++. ++.++.+|+...
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 18 LGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 3445556666788999999999999999998763 3479999999999999999999887764 799999999665
Q ss_pred CCCCCCCCCccEEEE
Q 013515 305 DPKDPAYSEVRAILL 319 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~ 319 (441)
+... ++||.|++
T Consensus 97 ~~~~---~~fD~V~~ 108 (219)
T 3jwg_A 97 DKRF---SGYDAATV 108 (219)
T ss_dssp CGGG---TTCSEEEE
T ss_pred cccc---CCCCEEEE
Confidence 5332 68999995
No 150
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.98 E-value=2e-09 Score=103.90 Aligned_cols=96 Identities=25% Similarity=0.300 Sum_probs=81.2
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDF 301 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~ 301 (441)
|..++.....++..+++.++++|||+|||+|..|..+++. ..+|+|+|+++.+++.+++++...|. ++++++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 3445556667777888889999999999999999999987 26899999999999999999987776 6899999999
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCC
Q 013515 302 LNLDPKDPAYSEVRAILLDPSCSGS 326 (441)
Q Consensus 302 ~~~~~~~~~~~~fD~Il~DpPCSg~ 326 (441)
.+++. ..||.|++++|+..+
T Consensus 87 ~~~~~-----~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 87 LKTDL-----PFFDTCVANLPYQIS 106 (285)
T ss_dssp TTSCC-----CCCSEEEEECCGGGH
T ss_pred ecccc-----hhhcEEEEecCcccc
Confidence 87653 368999999998653
No 151
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.98 E-value=1.3e-09 Score=101.28 Aligned_cols=117 Identities=10% Similarity=0.099 Sum_probs=88.1
Q ss_pred HHHHHhC-CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 013515 232 MVAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 232 l~~~~l~-~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 310 (441)
.+..++. ..++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...+ ++.++++|+.+++..
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~--- 107 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE--- 107 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC---
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC---
Confidence 3334444 5678999999999999999999885 35799999999999999999987665 899999999987754
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
++||+|++.... ..+ ... ....+|..+.+.++ ||.++.++.+..
T Consensus 108 -~~fD~v~~~~~l---~~~--------------------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 108 -EKYDMVVSALSI---HHL--------------------EDE-------DKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp -SCEEEEEEESCG---GGS--------------------CHH-------HHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred -CCceEEEEeCcc---ccC--------------------CHH-------HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 679999976431 111 011 11357888888777 788888776543
No 152
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.98 E-value=3.4e-09 Score=96.11 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=82.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++ +|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...|. ++.+.++|+.+++... ++||.|+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~---~~fD~v~ 99 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVA---DAWEGIV 99 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCT---TTCSEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCc---CCccEEE
Confidence 3567 9999999999999988875 35999999999999999999999887 7999999998876433 6799999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
+.. ..+ ..+ ....+|..+.+.++ ||.++.++.+.
T Consensus 100 ~~~-----~~~--------------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 100 SIF-----CHL--------------------PSS-------LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp EEC-----CCC--------------------CHH-------HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred EEh-----hcC--------------------CHH-------HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 631 111 011 13567888888887 68888776543
No 153
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.98 E-value=2.4e-09 Score=102.07 Aligned_cols=82 Identities=24% Similarity=0.348 Sum_probs=71.6
Q ss_pred HhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCcc
Q 013515 236 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
.....++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...|+.++.++.+|+..++... ++||
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~---~~fD 107 (276)
T 3mgg_A 32 DTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFED---SSFD 107 (276)
T ss_dssp TCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCT---TCEE
T ss_pred cccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCC---CCee
Confidence 3445789999999999999999999884 45799999999999999999999999989999999999877543 6899
Q ss_pred EEEEcC
Q 013515 316 AILLDP 321 (441)
Q Consensus 316 ~Il~Dp 321 (441)
.|++..
T Consensus 108 ~v~~~~ 113 (276)
T 3mgg_A 108 HIFVCF 113 (276)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 999744
No 154
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.97 E-value=1.7e-09 Score=99.76 Aligned_cols=107 Identities=17% Similarity=0.196 Sum_probs=82.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..+ .++.++++|+.+++... ++||.|++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~---~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFED---KTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSCT---TCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCCC---CcEEEEEE
Confidence 458899999999999999988763 389999999999999999999887 68999999998866332 68999998
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
.++.. .. ...+ ...+|..+.+.++ ||.++.+++.
T Consensus 110 ~~~~~---~~--------------------~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIV---HF--------------------EPLE-------LNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGG---GC--------------------CHHH-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchH---hC--------------------CHHH-------HHHHHHHHHHHcCCCcEEEEEecC
Confidence 86611 00 0111 2467788877777 7888877664
No 155
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.97 E-value=8.3e-10 Score=100.98 Aligned_cols=134 Identities=18% Similarity=0.239 Sum_probs=90.6
Q ss_pred HhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh------------CCCcEEEEeccCCC
Q 013515 236 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS------------GAANIEVLHGDFLN 303 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~------------g~~~v~~~~~D~~~ 303 (441)
.+.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++.... +..+++++++|+.+
T Consensus 17 ~l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 93 (203)
T 1pjz_A 17 SLNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 93 (203)
T ss_dssp HHCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred hcccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence 345678999999999999999999986 259999999999999998876431 23578999999998
Q ss_pred CCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 304 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 304 ~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
++..+ .++||.|+.-. ++.. ...+ .....+....+.++ ||++++.|+
T Consensus 94 l~~~~--~~~fD~v~~~~------~l~~-----------------l~~~-------~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 94 LTARD--IGHCAAFYDRA------AMIA-----------------LPAD-------MRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp STHHH--HHSEEEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCccc--CCCEEEEEECc------chhh-----------------CCHH-------HHHHHHHHHHHHcCCCcEEEEEEE
Confidence 87432 15799998522 1210 0111 12356777778777 677666665
Q ss_pred CCCCh--------hcHHHHHHHhchhcCCCeEEe
Q 013515 383 SIHQV--------ENEDVIKSVLPIAMSFGFQLA 408 (441)
Q Consensus 383 S~~~~--------ENe~vV~~~l~~~~~~~~~~~ 408 (441)
..... -+++.+...++ . +|+++
T Consensus 142 ~~~~~~~~~~~~~~~~~el~~~~~---~-gf~i~ 171 (203)
T 1pjz_A 142 EYDQALLEGPPFSVPQTWLHRVMS---G-NWEVT 171 (203)
T ss_dssp SSCSSSSSSCCCCCCHHHHHHTSC---S-SEEEE
T ss_pred ecCccccCCCCCCCCHHHHHHHhc---C-CcEEE
Confidence 54321 13455555552 3 77764
No 156
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.96 E-value=2.2e-09 Score=107.87 Aligned_cols=108 Identities=17% Similarity=0.244 Sum_probs=85.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh-----C-C--CcEEEEeccCCCC------
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-----G-A--ANIEVLHGDFLNL------ 304 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~-----g-~--~~v~~~~~D~~~~------ 304 (441)
+.+|.+|||+|||+|..+..++...++.++|+++|+++.+++.++++++.+ | . .++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 567899999999999999999998766689999999999999999998876 4 3 5899999999886
Q ss_pred CCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 305 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
+..+ ++||+|+++.. +..-+| + ..+|..+.++|+ ||.++.++
T Consensus 161 ~~~~---~~fD~V~~~~~------l~~~~d----------------~----------~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPD---SSVDIVISNCV------CNLSTN----------------K----------LALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCT---TCEEEEEEESC------GGGCSC----------------H----------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCC---CCEEEEEEccc------hhcCCC----------------H----------HHHHHHHHHHcCCCCEEEEEE
Confidence 3332 68999997643 211111 1 367888888877 68877764
No 157
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.96 E-value=1.8e-09 Score=107.24 Aligned_cols=115 Identities=17% Similarity=0.123 Sum_probs=87.7
Q ss_pred HHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCC
Q 013515 234 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYS 312 (441)
Q Consensus 234 ~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~ 312 (441)
...+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ ++|+++.+|+.+++.. +
T Consensus 43 ~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~----~ 115 (348)
T 2y1w_A 43 LQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP----E 115 (348)
T ss_dssp HHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----S
T ss_pred HhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC----C
Confidence 33455668999999999999999988875 446999999996 88999999999998 6899999999887533 5
Q ss_pred CccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 313 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 313 ~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
+||+|+++++....+ +++ ....+..+.++|+ +|.++.+++++.
T Consensus 116 ~~D~Ivs~~~~~~~~----~~~--------------------------~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (348)
T 2y1w_A 116 QVDIIISEPMGYMLF----NER--------------------------MLESYLHAKKYLKPSGNMFPTIGDVH 159 (348)
T ss_dssp CEEEEEECCCBTTBT----TTS--------------------------HHHHHHHGGGGEEEEEEEESCEEEEE
T ss_pred ceeEEEEeCchhcCC----hHH--------------------------HHHHHHHHHhhcCCCeEEEEecCcEE
Confidence 799999987733211 000 1245666777777 688887777654
No 158
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.96 E-value=8.5e-10 Score=102.79 Aligned_cols=110 Identities=9% Similarity=-0.016 Sum_probs=81.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCC-HHHHHHH---HHHHHHhCCCcEEEEeccCCCCCCCCCCCCCcc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN-KERVRRL---KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~-~~rl~~l---~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
.++++|||+|||+|..+..++... +...|+|+|++ +.+++.+ ++++++.|+.|+.++++|+..++... +..+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~--~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL--KNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG--TTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc--cCeEE
Confidence 678999999999999999998753 45799999999 6666665 88888889989999999999885322 25688
Q ss_pred EEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEE
Q 013515 316 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVY 379 (441)
Q Consensus 316 ~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvY 379 (441)
.|.+..|-. .........+..+|..+.+.|+ ||.++.
T Consensus 100 ~i~~~~~~~---------------------------~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 100 SISILFPWG---------------------------TLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEESCCH---------------------------HHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEeCCCc---------------------------HHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 888877721 1111111122467888888888 677666
No 159
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.96 E-value=5e-09 Score=98.62 Aligned_cols=117 Identities=11% Similarity=0.066 Sum_probs=87.8
Q ss_pred ccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 225 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 225 ~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
.|......+...+.+.++.+|||+|||+|..+..++...+ ..+|+++|+++.+++.++++ ..++.++.+|+.++
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~ 90 (259)
T 2p35_A 17 ERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATW 90 (259)
T ss_dssp GGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTC
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhc
Confidence 3444445555566677899999999999999999998863 47999999999999999887 35788999999887
Q ss_pred CCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 305 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 305 ~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+ .. ++||.|++... ...+ +| ...+|..+.+.++ ||.++.++..
T Consensus 91 ~-~~---~~fD~v~~~~~---l~~~---~~--------------------------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 91 K-PA---QKADLLYANAV---FQWV---PD--------------------------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp C-CS---SCEEEEEEESC---GGGS---TT--------------------------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred C-cc---CCcCEEEEeCc---hhhC---CC--------------------------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 6 32 68999997432 1111 11 1367888888887 6888887643
No 160
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.95 E-value=4.2e-09 Score=102.77 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=89.1
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 310 (441)
.+...+.+.+|.+|||+|||+|..+..+++.. + .+|+++|+++.+++.++++++..|+. ++.++.+|+.+++
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----- 153 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-D-VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----- 153 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-C-CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-----
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-----
Confidence 44445667889999999999999999999876 2 59999999999999999999998874 6999999998764
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ 386 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~ 386 (441)
++||+|++... +..-+ . .....+|..+.+.++ ||.++.++.+...
T Consensus 154 -~~fD~v~~~~~------l~~~~-----------------~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 -EPVDRIVSIEA------FEHFG-----------------H-------ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp -CCCSEEEEESC------GGGTC-----------------G-------GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred -CCcCEEEEeCh------HHhcC-----------------H-------HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 56999996532 21100 0 012466777777776 7888887776544
No 161
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.95 E-value=3e-09 Score=102.08 Aligned_cols=82 Identities=20% Similarity=0.156 Sum_probs=70.6
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCC
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 312 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~ 312 (441)
+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...|+ ++.++++|+.+.+. . +
T Consensus 112 ~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-~---~ 183 (286)
T 3m70_A 112 VVDAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-Q---E 183 (286)
T ss_dssp HHHHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC-C---S
T ss_pred HHHHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc-c---C
Confidence 334444558999999999999999999886 35999999999999999999999998 89999999988765 2 7
Q ss_pred CccEEEEcCC
Q 013515 313 EVRAILLDPS 322 (441)
Q Consensus 313 ~fD~Il~DpP 322 (441)
+||.|++..+
T Consensus 184 ~fD~i~~~~~ 193 (286)
T 3m70_A 184 NYDFIVSTVV 193 (286)
T ss_dssp CEEEEEECSS
T ss_pred CccEEEEccc
Confidence 8999998765
No 162
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.94 E-value=2.6e-09 Score=101.27 Aligned_cols=122 Identities=14% Similarity=0.187 Sum_probs=90.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..+..++.+ + . +|+++|+++.+++.+++|++.+|+. +.+.++|+....+ .++||.|+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g-~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~----~~~fD~Vv 189 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G-G-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALP----FGPFDLLV 189 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T-C-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGG----GCCEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C-C-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCc----CCCCCEEE
Confidence 467899999999999999988875 2 2 9999999999999999999999987 8899999876321 15799999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHh
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVL 397 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l 397 (441)
++++.. . ...++..+.++++ ||.++.+... .+....+...+
T Consensus 190 ~n~~~~----------------------------~-------~~~~l~~~~~~LkpgG~lils~~~---~~~~~~v~~~l 231 (254)
T 2nxc_A 190 ANLYAE----------------------------L-------HAALAPRYREALVPGGRALLTGIL---KDRAPLVREAM 231 (254)
T ss_dssp EECCHH----------------------------H-------HHHHHHHHHHHEEEEEEEEEEEEE---GGGHHHHHHHH
T ss_pred ECCcHH----------------------------H-------HHHHHHHHHHHcCCCCEEEEEeec---cCCHHHHHHHH
Confidence 876520 0 1356777777776 6888776443 23455565665
Q ss_pred chhcCCCeEEec
Q 013515 398 PIAMSFGFQLAT 409 (441)
Q Consensus 398 ~~~~~~~~~~~~ 409 (441)
+ ..+|++..
T Consensus 232 ~---~~Gf~~~~ 240 (254)
T 2nxc_A 232 A---GAGFRPLE 240 (254)
T ss_dssp H---HTTCEEEE
T ss_pred H---HCCCEEEE
Confidence 3 35787754
No 163
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.94 E-value=9.6e-10 Score=101.20 Aligned_cols=115 Identities=16% Similarity=0.116 Sum_probs=81.7
Q ss_pred HHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHH----HHHhCCCcEEEEeccCCCCCCCCC
Q 013515 234 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT----IKLSGAANIEVLHGDFLNLDPKDP 309 (441)
Q Consensus 234 ~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~----~~~~g~~~v~~~~~D~~~~~~~~~ 309 (441)
...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.+.++ ....+++++.++++|+.+++...
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~- 97 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS- 97 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC-
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC-
Confidence 344557889999999999999999999974 458999999999988864433 33467789999999999977543
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEE
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYS 380 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYs 380 (441)
+. |.|.+..|... .......-+..+|..+.+.++ ||.++.+
T Consensus 98 --~~-d~v~~~~~~~~---------------------------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 98 --GV-GELHVLMPWGS---------------------------LLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp --CE-EEEEEESCCHH---------------------------HHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred --CC-CEEEEEccchh---------------------------hhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 34 77775554211 000111112467888888888 6776664
No 164
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.94 E-value=1.9e-09 Score=104.59 Aligned_cols=113 Identities=12% Similarity=0.026 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEeccCCCCCCCCCCCCCc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG-----AANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
..+.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++...+ -.+++++.+|+..+.... .++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~--~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT--SQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC--CCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc--CCCc
Confidence 34679999999999999999876 345799999999999999999998752 357999999998765432 2689
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|+|++|+|... | |... -.+.++++.+.+.|+ ||.++..++|
T Consensus 159 DvIi~D~~~p~-~-----~~~~----------------------l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 159 DVIISDCTDPI-G-----PGES----------------------LFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEEEECC--------------------------------------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEECCCCcc-C-----cchh----------------------ccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 99999998421 1 1000 011467788888887 6877776554
No 165
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.94 E-value=1.7e-09 Score=107.41 Aligned_cols=112 Identities=13% Similarity=0.042 Sum_probs=86.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
..++.+|||+|||+|..+..+++. +..+|+|+|++ ++++.++++++..|+.+ |+++++|+.+++... ++||+|
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~I 137 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPV---EKVDII 137 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS---SCEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCC---CceEEE
Confidence 457899999999999999999886 45799999999 59999999999999855 999999999886443 689999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
++++....... .++ ...+|..+.++|+ ||.++.+.+++.
T Consensus 138 is~~~~~~l~~---~~~--------------------------~~~~l~~~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 138 ISEWMGYCLFY---ESM--------------------------LNTVLHARDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp EECCCBBTBTB---TCC--------------------------HHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred EEccccccccC---chh--------------------------HHHHHHHHHHhCCCCCEEccccceEE
Confidence 99875332210 000 1356666667777 788887776654
No 166
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.93 E-value=4.6e-09 Score=95.71 Aligned_cols=120 Identities=10% Similarity=-0.002 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++.. +. .+|+++|+++.+++.+++++.. ..++.++++|+.+++... ++||+|++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~---~~fD~v~~ 113 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPS---ASFDVVLE 113 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCS---SCEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCC---CcccEEEE
Confidence 67899999999999999999886 22 3899999999999999998764 357899999998875433 67999998
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+++....-. .+++. | . ... ........+|..+.+.++ ||.++.++.+
T Consensus 114 ~~~~~~~~~--~~~~~-~---------~-~~~----~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 114 KGTLDALLA--GERDP-W---------T-VSS----EGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp ESHHHHHTT--TCSCT-T---------S-CCH----HHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred Ccchhhhcc--ccccc-c---------c-ccc----chhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 776422110 01110 1 0 011 122334677888888777 7888888776
No 167
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.93 E-value=2e-09 Score=105.99 Aligned_cols=82 Identities=17% Similarity=0.208 Sum_probs=69.1
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCcc
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+|+ ++|+++.+|+.+++... ++||
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~D 107 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPF---PKVD 107 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSS---SCEE
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCC---Cccc
Confidence 34457899999999999999988875 34699999999 599999999999998 46999999999876432 6799
Q ss_pred EEEEcCCCC
Q 013515 316 AILLDPSCS 324 (441)
Q Consensus 316 ~Il~DpPCS 324 (441)
+|+++++..
T Consensus 108 ~Ivs~~~~~ 116 (328)
T 1g6q_1 108 IIISEWMGY 116 (328)
T ss_dssp EEEECCCBT
T ss_pred EEEEeCchh
Confidence 999998743
No 168
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.93 E-value=1.3e-09 Score=106.03 Aligned_cols=113 Identities=13% Similarity=0.005 Sum_probs=86.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
.+.++.+|||+|||+|..+..++....+..+|+++|+++.+++.+++++...|+. +++++++|+.+++.. ++||.
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~ 190 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR----EGYDL 190 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC----SCEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc----CCeEE
Confidence 3578999999999999999988633345679999999999999999999998885 499999999987643 67999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|++..+. -.-|| ++ .+..+|..+.+.++ ||.++.++.+
T Consensus 191 v~~~~~~------~~~~~----------------~~-------~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 191 LTSNGLN------IYEPD----------------DA-------RVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp EECCSSG------GGCCC----------------HH-------HHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECChh------hhcCC----------------HH-------HHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9965432 11111 11 12457888888777 7888877643
No 169
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.91 E-value=2.1e-09 Score=101.44 Aligned_cols=115 Identities=11% Similarity=0.126 Sum_probs=86.1
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
.+...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... .++.++++|+.+++..+
T Consensus 46 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~--- 118 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPE--- 118 (266)
T ss_dssp HHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCT---
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCC---
Confidence 33444567789999999999999999999876 369999999999999999887654 68999999999876543
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
++||+|++... +.. .... ....+|..+.+.++ ||.++.++.+
T Consensus 119 ~~fD~v~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 119 NNFDLIYSRDA------ILA-----------------LSLE-------NKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp TCEEEEEEESC------GGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CcEEEEeHHHH------HHh-----------------cChH-------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 68999996422 111 0011 12467788878777 6888777643
No 170
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.90 E-value=9.3e-09 Score=97.44 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=62.3
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHH-----------------hCCCcEEEEec
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL-----------------SGAANIEVLHG 299 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~-----------------~g~~~v~~~~~ 299 (441)
+.+.++.+|||+|||+|..+..|++. ...|+|+|+|+.+++.++++... ....+|.++++
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC
Confidence 34567899999999999999999986 25899999999999999766431 01257999999
Q ss_pred cCCCCCCCCCCCCCccEEEE
Q 013515 300 DFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 300 D~~~~~~~~~~~~~fD~Il~ 319 (441)
|+.+++..+ .++||+|+.
T Consensus 141 D~~~l~~~~--~~~FD~V~~ 158 (252)
T 2gb4_A 141 SIFDLPRAN--IGKFDRIWD 158 (252)
T ss_dssp CTTTGGGGC--CCCEEEEEE
T ss_pred ccccCCccc--CCCEEEEEE
Confidence 999887542 168999985
No 171
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.90 E-value=1.5e-08 Score=103.09 Aligned_cols=89 Identities=21% Similarity=0.160 Sum_probs=69.5
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHH-------HHHHHHhC--CCcEEEEeccCCC
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL-------KDTIKLSG--AANIEVLHGDFLN 303 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l-------~~~~~~~g--~~~v~~~~~D~~~ 303 (441)
+...+++.+|++|||+|||+|..+..++...+ ..+|+|+|+++.+++.+ +++++.+| +.+|+++++|...
T Consensus 234 ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~ 312 (433)
T 1u2z_A 234 VYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 312 (433)
T ss_dssp HHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence 44567788999999999999999999999764 46899999999998888 99999999 5799999886543
Q ss_pred CCCCC-CCCCCccEEEEcCC
Q 013515 304 LDPKD-PAYSEVRAILLDPS 322 (441)
Q Consensus 304 ~~~~~-~~~~~fD~Il~DpP 322 (441)
..... .....||+|+++..
T Consensus 313 ~~~~~~~~~~~FDvIvvn~~ 332 (433)
T 1u2z_A 313 DNNRVAELIPQCDVILVNNF 332 (433)
T ss_dssp TCHHHHHHGGGCSEEEECCT
T ss_pred cccccccccCCCCEEEEeCc
Confidence 21000 00157999998644
No 172
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.90 E-value=1e-09 Score=107.06 Aligned_cols=78 Identities=18% Similarity=0.195 Sum_probs=58.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeC----CHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL----NKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSE 313 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~----~~~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~ 313 (441)
+++|.+|||+|||||+.|..+++. ++|+++|+ ++.+++.+ ..+..|.++|.++.+ |+..++. .+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~~-----~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIPP-----ER 148 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSCC-----CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCCc-----CC
Confidence 467899999999999999999876 57999999 55443211 112233467999999 8887642 57
Q ss_pred ccEEEEcCCCCCCcc
Q 013515 314 VRAILLDPSCSGSGT 328 (441)
Q Consensus 314 fD~Il~DpPCSg~G~ 328 (441)
||+|++|.+|+ +|.
T Consensus 149 fD~V~sd~~~~-~g~ 162 (305)
T 2p41_A 149 CDTLLCDIGES-SPN 162 (305)
T ss_dssp CSEEEECCCCC-CSS
T ss_pred CCEEEECCccc-cCc
Confidence 99999999997 663
No 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.90 E-value=2.3e-09 Score=107.56 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=86.3
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCcc
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
+...+|.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+|+. +|+++++|+.++... ++||
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D 131 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP----EKVD 131 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS----SCEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC----Ccce
Confidence 45568999999999999999999886 34599999999 9999999999999985 499999999887643 6799
Q ss_pred EEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 316 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 316 ~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
+|++++...... +.+ ....++..+.++|+ ||.++.+.+++.
T Consensus 132 ~Iv~~~~~~~l~----~e~-------------------------~~~~~l~~~~~~LkpgG~li~~~~~~~ 173 (376)
T 3r0q_C 132 VIISEWMGYFLL----RES-------------------------MFDSVISARDRWLKPTGVMYPSHARMW 173 (376)
T ss_dssp EEEECCCBTTBT----TTC-------------------------THHHHHHHHHHHEEEEEEEESSEEEEE
T ss_pred EEEEcChhhccc----chH-------------------------HHHHHHHHHHhhCCCCeEEEEecCeEE
Confidence 999987422211 000 01346666667777 788887777643
No 174
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.90 E-value=8.1e-09 Score=110.91 Aligned_cols=119 Identities=11% Similarity=0.083 Sum_probs=89.9
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh------CCCcEEEEeccCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS------GAANIEVLHGDFLNLD 305 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~------g~~~v~~~~~D~~~~~ 305 (441)
.+...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.+++++... |..+|+++++|+.+++
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp 791 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC
T ss_pred HHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC
Confidence 3455566668999999999999999999887434469999999999999999987753 6678999999999987
Q ss_pred CCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCC
Q 013515 306 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 383 (441)
Q Consensus 306 ~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTCS 383 (441)
..+ +.||+|++ .+++..-+ . .....++..+.+.+++|.++.+|..
T Consensus 792 ~~d---~sFDlVV~------~eVLeHL~-----------------d-------p~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 792 SRL---HDVDIGTC------LEVIEHME-----------------E-------DQACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp TTS---CSCCEEEE------ESCGGGSC-----------------H-------HHHHHHHHHHHHTTCCSEEEEEECB
T ss_pred ccc---CCeeEEEE------eCchhhCC-----------------h-------HHHHHHHHHHHHHcCCCEEEEEecC
Confidence 654 68999997 23332111 1 1123577888888887777777653
No 175
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.89 E-value=6.6e-09 Score=100.48 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=68.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEeccCCCCCCCC---CCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GAANIEVLHGDFLNLDPKD---PAYSE 313 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g~~~v~~~~~D~~~~~~~~---~~~~~ 313 (441)
..++.+|||+|||+|..+..++..+.+..+|+++|+++.+++.++++++.. +..++.++++|+.+++... ...++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 357999999999999999999987645689999999999999999999987 3468999999999876432 00157
Q ss_pred ccEEEEc
Q 013515 314 VRAILLD 320 (441)
Q Consensus 314 fD~Il~D 320 (441)
||.|++.
T Consensus 114 fD~V~~~ 120 (299)
T 3g5t_A 114 IDMITAV 120 (299)
T ss_dssp EEEEEEE
T ss_pred eeEEeHh
Confidence 9999974
No 176
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.89 E-value=7.2e-09 Score=94.72 Aligned_cols=112 Identities=18% Similarity=0.127 Sum_probs=83.8
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
+...+....++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++ .|..++.++++|+.++ ...
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~-~~~--- 105 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW-TPD--- 105 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC-CCS---
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC-CCC---
Confidence 3333334678889999999999999999987 3699999999999999987 6777899999999887 222
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
++||+|++.- ++..- .. .....+|..+.+.++ ||.++.++.+.
T Consensus 106 ~~~D~v~~~~------~l~~~-----------------~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAH------WLAHV-----------------PD-------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEES------CGGGS-----------------CH-------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEec------hhhcC-----------------CH-------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 7899999742 22110 01 112467888888777 78888887654
No 177
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.89 E-value=6.1e-09 Score=99.90 Aligned_cols=105 Identities=18% Similarity=0.251 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..|+ .++.++++|+.+++... .++||+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL--ETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC--SSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc--CCCceEEEE
Confidence 3789999999999999999886 36999999999999999999999998 68999999999876322 168999997
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
... +..-+| + ..+|..+.++++ ||.++.++.
T Consensus 143 ~~~------l~~~~~----------------~----------~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 143 HAV------LEWVAD----------------P----------RSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp ESC------GGGCSC----------------H----------HHHHHHHHHTEEEEEEEEEEEE
T ss_pred Cch------hhcccC----------------H----------HHHHHHHHHHcCCCeEEEEEEe
Confidence 532 211111 1 357888888887 688877654
No 178
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.89 E-value=2.1e-09 Score=102.11 Aligned_cols=92 Identities=22% Similarity=0.248 Sum_probs=74.0
Q ss_pred hhhHHHHHHhCCCCC--CEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh-------C-C-CcEEE
Q 013515 228 KASSMVAAALAPKPG--WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-------G-A-ANIEV 296 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g--~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~-------g-~-~~v~~ 296 (441)
.....+..++++.+| .+|||+|||.|..++.++.. .++|+++|+++..++.+++++++. | + .++++
T Consensus 73 ~~~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~ 149 (258)
T 2oyr_A 73 GRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQL 149 (258)
T ss_dssp GGGSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEE
T ss_pred chHHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEE
Confidence 344566677777778 99999999999999999987 257999999999988888887654 2 3 57999
Q ss_pred EeccCCCCCCCCCCCCCccEEEEcCCCC
Q 013515 297 LHGDFLNLDPKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 297 ~~~D~~~~~~~~~~~~~fD~Il~DpPCS 324 (441)
+++|+.++....+ .+||+|++|||..
T Consensus 150 ~~~D~~~~L~~~~--~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 150 IHASSLTALTDIT--PRPQVVYLDPMFP 175 (258)
T ss_dssp EESCHHHHSTTCS--SCCSEEEECCCCC
T ss_pred EECCHHHHHHhCc--ccCCEEEEcCCCC
Confidence 9999988654332 4699999999963
No 179
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.88 E-value=7.1e-09 Score=99.57 Aligned_cols=113 Identities=14% Similarity=0.036 Sum_probs=85.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++...|. .++.++++|+.+.+... .++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDL--GKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCC--SSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCC--CCCcCEE
Confidence 367899999999999999998876 346999999999999999999998877 57999999999876421 2689999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
++.-. +..- + ...+ ....+|..+.+.++ ||.++.++++
T Consensus 138 ~~~~~------l~~~----~-----------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 138 SSQFS------FHYA----F-----------STSE-------SLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEESC------GGGG----G-----------SSHH-------HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EECch------hhhh----c-----------CCHH-------HHHHHHHHHHHhcCCCCEEEEEECC
Confidence 97632 1000 0 0011 23567888888887 7888888765
No 180
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.87 E-value=2.4e-08 Score=104.53 Aligned_cols=106 Identities=17% Similarity=0.249 Sum_probs=86.5
Q ss_pred hcCcccccchhhHHHHHHhC----CCCCCEEEEEcCCCchHHHHHHHHhc--CCcEEEEEeCCHHHHHHHHHHHHHhCC-
Q 013515 219 VNGCVFLQGKASSMVAAALA----PKPGWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKERVRRLKDTIKLSGA- 291 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~----~~~g~~VLDl~ag~G~kt~~la~~~~--~~~~V~a~D~~~~rl~~l~~~~~~~g~- 291 (441)
..|.|+=-..-+.+++.++. +.++.+|+|.|||+|++.+.++..+. +...++|+|+++..+..++.|+...|+
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 35666555566777777777 67899999999999999999888863 246899999999999999999999998
Q ss_pred -CcEEEEeccCCCCC--CCCCCCCCccEEEEcCCCCCC
Q 013515 292 -ANIEVLHGDFLNLD--PKDPAYSEVRAILLDPSCSGS 326 (441)
Q Consensus 292 -~~v~~~~~D~~~~~--~~~~~~~~fD~Il~DpPCSg~ 326 (441)
.++.+.++|....+ ... ..+||+|+.+||.++.
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~--~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQE--PTNFDGVLMNPPYSAK 310 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSS--CCCBSEEEECCCTTCC
T ss_pred cCccceEecceecccccccc--cccccEEEecCCcCCc
Confidence 57899999988763 211 2689999999999854
No 181
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=4.7e-10 Score=106.77 Aligned_cols=92 Identities=22% Similarity=0.235 Sum_probs=72.8
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCH-------HHHHHHHHHHHHhCCCc-EEEEeccC
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK-------ERVRRLKDTIKLSGAAN-IEVLHGDF 301 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~-------~rl~~l~~~~~~~g~~~-v~~~~~D~ 301 (441)
..++...+.+.+|++|||+|||+|..++.++.. .++|+++|+++ .+++.+++|++.+|+.+ |+++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 445555666677899999999999999999985 36899999999 99999999999888755 99999999
Q ss_pred CCCCCCCCC-CCCccEEEEcCCCC
Q 013515 302 LNLDPKDPA-YSEVRAILLDPSCS 324 (441)
Q Consensus 302 ~~~~~~~~~-~~~fD~Il~DpPCS 324 (441)
.++....+. ..+||+|++|||..
T Consensus 149 ~~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 149 AEQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCC-
T ss_pred HHHHHhhhccCCCccEEEECCCCC
Confidence 875321100 04699999999853
No 182
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.87 E-value=9.9e-09 Score=95.46 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=90.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
+.+|||+|||+|..+..++. ...+|+++|+++.+++.+++++...+. .++.++++|+.++++. .+||+|++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT----ELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS----SCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCC----CCeeEEEEC
Confidence 45999999999999998865 347899999999999999999887543 5799999999987643 589999964
Q ss_pred CCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCh-------hcHHH
Q 013515 321 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQV-------ENEDV 392 (441)
Q Consensus 321 pPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~-------ENe~v 392 (441)
... ..+ + ++ ....+|..+.++++ ||.++..+.+.... -..+.
T Consensus 140 ~~l---~~~---~-----------------~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (235)
T 3lcc_A 140 VFF---CAI---E-----------------PE-------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVST 189 (235)
T ss_dssp SST---TTS---C-----------------GG-------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHH
T ss_pred hhh---hcC---C-----------------HH-------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHH
Confidence 321 111 0 00 11366777777777 68777665544322 24566
Q ss_pred HHHHhchhcCCCeEEec
Q 013515 393 IKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 393 V~~~l~~~~~~~~~~~~ 409 (441)
+...++ ..+|+++.
T Consensus 190 ~~~~l~---~~Gf~~~~ 203 (235)
T 3lcc_A 190 FEEVLV---PIGFKAVS 203 (235)
T ss_dssp HHHHHG---GGTEEEEE
T ss_pred HHHHHH---HcCCeEEE
Confidence 777774 35787654
No 183
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.87 E-value=6.3e-09 Score=97.86 Aligned_cols=109 Identities=10% Similarity=0.017 Sum_probs=82.1
Q ss_pred HHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCC
Q 013515 234 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 234 ~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
...+...++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++. ..++.++++|+.+++... ++
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~---~~ 108 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEP---DA 108 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCT---TC
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCC---CC
Confidence 345556689999999999999999998862 2499999999999999988865 457999999998877543 68
Q ss_pred ccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 314 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 314 fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
||+|++.-. +..-+| ...+|..+.+.++ ||.++.++.
T Consensus 109 fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 109 YNVVLSSLA------LHYIAS--------------------------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEEchh------hhhhhh--------------------------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 999997432 211011 1367788888777 788887643
No 184
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.87 E-value=2.4e-08 Score=89.15 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=94.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++ .++.++++|+.+++... ++||.|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~---~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISE---TDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCC---CCEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCC---CceeEEE
Confidence 457899999999999999999886 369999999999999998875 35788999998875432 6799999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHh
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVL 397 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l 397 (441)
+++++-. .+ ..++ ...+|..+.+.++ +|.++.++.+.. .-....+...+
T Consensus 113 ~~~~~~~--~~--------------------~~~~-------~~~~l~~~~~~l~~~G~l~~~~~~~~-~~~~~~~~~~l 162 (195)
T 3cgg_A 113 SAGNVMG--FL--------------------AEDG-------REPALANIHRALGADGRAVIGFGAGR-GWVFGDFLEVA 162 (195)
T ss_dssp ECCCCGG--GS--------------------CHHH-------HHHHHHHHHHHEEEEEEEEEEEETTS-SCCHHHHHHHH
T ss_pred ECCcHHh--hc--------------------ChHH-------HHHHHHHHHHHhCCCCEEEEEeCCCC-CcCHHHHHHHH
Confidence 9866421 00 1111 2467777777777 677777654432 23444555555
Q ss_pred chhcCCCeEEecCCCCCCCc
Q 013515 398 PIAMSFGFQLATPFPNGTAE 417 (441)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~ 417 (441)
+ ..+|++......|...
T Consensus 163 ~---~~Gf~~~~~~~~~~~~ 179 (195)
T 3cgg_A 163 E---RVGLELENAFESWDLK 179 (195)
T ss_dssp H---HHTEEEEEEESSTTCC
T ss_pred H---HcCCEEeeeecccccC
Confidence 4 3478887665555543
No 185
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.86 E-value=6e-09 Score=98.92 Aligned_cols=90 Identities=16% Similarity=0.190 Sum_probs=74.3
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.-...++..+++.+|++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++.. ..+++++++|+.+++..
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~ 90 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFS 90 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHH
Confidence 34566777888999999999999999999999876 26999999999999999999875 46899999999988743
Q ss_pred CC-CCCCccEEEEcCCC
Q 013515 308 DP-AYSEVRAILLDPSC 323 (441)
Q Consensus 308 ~~-~~~~fD~Il~DpPC 323 (441)
.. ...+|| |+.++|.
T Consensus 91 ~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp GSCCSSCEE-EEEECCH
T ss_pred HhccCCCeE-EEecCCc
Confidence 21 014677 9999996
No 186
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.86 E-value=7.7e-09 Score=94.07 Aligned_cols=111 Identities=11% Similarity=0.063 Sum_probs=81.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
...++.+|||+|||+|..+..++.. ...+|+++|+++.+++.++++++..+ .++.++++|+.+++... ++||.|
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~---~~fD~v 93 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPFKD---ESMSFV 93 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCSCT---TCEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCCCC---CceeEE
Confidence 3467899999999999986555443 23699999999999999999998877 46889999998876433 679999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
++... +.. ...++ ...+|..+.+.++ ||.++.++++.
T Consensus 94 ~~~~~------l~~-----------------~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 94 YSYGT------IFH-----------------MRKND-------VKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EECSC------GGG-----------------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEcCh------HHh-----------------CCHHH-------HHHHHHHHHHHcCCCcEEEEEEecc
Confidence 96422 110 01111 2466777777777 78888887764
No 187
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.85 E-value=1.1e-08 Score=96.43 Aligned_cols=76 Identities=13% Similarity=0.163 Sum_probs=64.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
.+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++ ..+..++.++++|+.+++..+ ++||.|
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~---~~fD~v 108 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPD---ESVHGV 108 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCT---TCEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCC---CCeeEE
Confidence 5678999999999999999999875 369999999999999999988 444578999999998876443 679999
Q ss_pred EEc
Q 013515 318 LLD 320 (441)
Q Consensus 318 l~D 320 (441)
++.
T Consensus 109 ~~~ 111 (263)
T 2yqz_A 109 IVV 111 (263)
T ss_dssp EEE
T ss_pred EEC
Confidence 974
No 188
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.85 E-value=1.9e-09 Score=103.79 Aligned_cols=111 Identities=16% Similarity=0.176 Sum_probs=82.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--C---------CCcEEEEeccCCCCCCCC
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G---------AANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g---------~~~v~~~~~D~~~~~~~~ 308 (441)
..+.+|||+|||+|+.+..+++. +..+|+++|+++.+++.+++++ .. + -++++++.+|+.+.....
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNN 150 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhccc
Confidence 45789999999999999999886 4579999999999999999998 44 3 357999999987643221
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
++||+|++|+|+. .|. +.. + .+.+++..+.+.|+ ||.++..+++.
T Consensus 151 ---~~fD~Ii~d~~~~-~~~----~~~---------------------l--~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 151 ---RGFDVIIADSTDP-VGP----AKV---------------------L--FSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp ---CCEEEEEEECCCC-C------------------------------T--TSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred ---CCeeEEEECCCCC-CCc----chh---------------------h--hHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 6799999999963 121 000 0 12466777777777 78888876664
No 189
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.84 E-value=1.1e-08 Score=93.80 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=81.1
Q ss_pred HhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCcc
Q 013515 236 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
.+.+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. .++.++++|+.+++.. ++||
T Consensus 40 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~----~~fD 108 (220)
T 3hnr_A 40 DVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP----TSID 108 (220)
T ss_dssp HHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC----SCCS
T ss_pred HhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC----CCeE
Confidence 344568999999999999999999886 3699999999999999988765 4788999999987643 6799
Q ss_pred EEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 316 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 316 ~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
.|++... +..-+ .++ +..+|..+.+.++ ||.++.++....
T Consensus 109 ~v~~~~~------l~~~~----------------~~~--------~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 109 TIVSTYA------FHHLT----------------DDE--------KNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp EEEEESC------GGGSC----------------HHH--------HHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred EEEECcc------hhcCC----------------hHH--------HHHHHHHHHHhcCCCCEEEEEecccc
Confidence 9997532 21100 011 1357777777776 788887764443
No 190
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.84 E-value=1.3e-08 Score=92.22 Aligned_cols=133 Identities=20% Similarity=0.085 Sum_probs=92.4
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
++..++.. .+.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..++.++++|+.+++..+
T Consensus 33 ~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~--- 100 (203)
T 3h2b_A 33 LIEPWATG-VDGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDSP--- 100 (203)
T ss_dssp HHHHHHHH-CCSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGSC---
T ss_pred HHHHHhcc-CCCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccCC---
Confidence 33444432 2889999999999999999886 35899999999999999887 347889999998876443
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC----
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ---- 386 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~---- 386 (441)
++||+|++... +..-+ .+ ....+|..+.+.++ ||.++.++.....
T Consensus 101 ~~fD~v~~~~~------l~~~~-----------------~~-------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~ 150 (203)
T 3h2b_A 101 KRWAGLLAWYS------LIHMG-----------------PG-------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPM 150 (203)
T ss_dssp CCEEEEEEESS------STTCC-----------------TT-------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEE
T ss_pred CCeEEEEehhh------HhcCC-----------------HH-------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhh
Confidence 68999997432 21100 00 01467888888887 6888877654332
Q ss_pred --------hhcHHHHHHHhchhcCCCeEEec
Q 013515 387 --------VENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 387 --------~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
.-..+.+...|+ ..||+++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~l~---~~Gf~~~~ 178 (203)
T 3h2b_A 151 YHPVATAYRWPLPELAQALE---TAGFQVTS 178 (203)
T ss_dssp CCSSSCEEECCHHHHHHHHH---HTTEEEEE
T ss_pred hchhhhhccCCHHHHHHHHH---HCCCcEEE
Confidence 123555666664 35788755
No 191
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.84 E-value=8.4e-09 Score=95.30 Aligned_cols=110 Identities=12% Similarity=0.144 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-----CcEEEEeccCCCCCCCCCCCCCc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-----ANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-----~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...++ .++.++.+|+..++... ++|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~ 102 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHD---SSF 102 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCT---TCE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCC---Cce
Confidence 47899999999999999999886 36999999999999999999988776 36899999999876443 689
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
|.|++... +..-+ +++. ...+|..+.+.++ ||.++.++...
T Consensus 103 D~v~~~~~------l~~~~----------------~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 103 DFAVMQAF------LTSVP----------------DPKE-------RSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EEEEEESC------GGGCC----------------CHHH-------HHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eEEEEcch------hhcCC----------------CHHH-------HHHHHHHHHHHcCCCeEEEEEECCc
Confidence 99997533 21111 1111 1357777777777 78888776543
No 192
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.84 E-value=5.8e-09 Score=100.36 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeC-CHHHHHHHHHHH-----HHhCCC-----cEEEEeccCCCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL-NKERVRRLKDTI-----KLSGAA-----NIEVLHGDFLNLDPK 307 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~-~~~rl~~l~~~~-----~~~g~~-----~v~~~~~D~~~~~~~ 307 (441)
..+|.+|||+|||+|..+..++.. +.++|+++|+ ++.+++.+++|+ +..|+. ++.+...|..+....
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 357889999999999999988875 3459999999 899999999999 666654 677876665442210
Q ss_pred CC---CCCCccEEEE-cCC
Q 013515 308 DP---AYSEVRAILL-DPS 322 (441)
Q Consensus 308 ~~---~~~~fD~Il~-DpP 322 (441)
.. ...+||+|++ |+.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl 173 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLL 173 (281)
T ss_dssp HHHHHSCSSBSEEEEESCC
T ss_pred HHhhccCCCCCEEEEeCcc
Confidence 00 0167999986 655
No 193
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.84 E-value=2.1e-08 Score=108.38 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=82.8
Q ss_pred CChhhhcCcccccch------hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhc-----------------------
Q 013515 214 VHPLIVNGCVFLQGK------ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK----------------------- 264 (441)
Q Consensus 214 ~~~~~~~g~~~~Qd~------ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~----------------------- 264 (441)
..++++-||-..+.. -+..++.+.+..++..|||.|||+|++.+.++....
T Consensus 157 g~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~ 236 (703)
T 3v97_A 157 GDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 236 (703)
T ss_dssp SSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHH
T ss_pred CCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHH
Confidence 345666665433322 233344556677899999999999999998887641
Q ss_pred ------------------CCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 265 ------------------GKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 265 ------------------~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
....|+|+|+++.+++.++.|++..|+.+ |.+.++|+.++..... .++||.|++|||.
T Consensus 237 w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~-~~~~d~Iv~NPPY 313 (703)
T 3v97_A 237 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP-KGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCT-TCCCCEEEECCCC
T ss_pred HHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccc-cCCCCEEEeCCCc
Confidence 12579999999999999999999999965 9999999998754321 1379999999997
No 194
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.83 E-value=5.5e-09 Score=97.65 Aligned_cols=131 Identities=13% Similarity=0.117 Sum_probs=93.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...|..++.++.+|+..++... ++||+|+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~---~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEP---DSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCS---SCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCC---CCEEEEEEc
Confidence 68999999999999999887763 3699999999999999999988776567999999998876543 579999976
Q ss_pred CCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC-----------hh
Q 013515 321 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ-----------VE 388 (441)
Q Consensus 321 pPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~-----------~E 388 (441)
-. +..- ... ....+|..+.+.++ ||.++.++..... .-
T Consensus 154 ~~------l~~~-----------------~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 203 (241)
T 2ex4_A 154 WV------IGHL-----------------TDQ-------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCR 203 (241)
T ss_dssp SC------GGGS-----------------CHH-------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEE
T ss_pred ch------hhhC-----------------CHH-------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccC
Confidence 32 2110 011 12467788878777 6888776542211 11
Q ss_pred cHHHHHHHhchhcCCCeEEec
Q 013515 389 NEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 389 Ne~vV~~~l~~~~~~~~~~~~ 409 (441)
+.+.+.++++ ..||+++.
T Consensus 204 ~~~~~~~~l~---~aGf~~~~ 221 (241)
T 2ex4_A 204 DLDVVRRIIC---SAGLSLLA 221 (241)
T ss_dssp BHHHHHHHHH---HTTCCEEE
T ss_pred CHHHHHHHHH---HcCCeEEE
Confidence 4566667764 34676544
No 195
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.83 E-value=6.4e-09 Score=98.62 Aligned_cols=111 Identities=16% Similarity=0.076 Sum_probs=82.5
Q ss_pred hhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC
Q 013515 229 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 229 ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~ 308 (441)
-...+...+.+.++.+|||+|||+|..+..+++ ...+|+++|+++.+++.++++. ++.++++|+.+++..+
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~ 92 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPD 92 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCT
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCC
Confidence 344556677778899999999999999999987 3479999999999988776543 7899999998877543
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 383 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTCS 383 (441)
++||.|++... ...+ +| . ..+|..+.+.++||.++..++.
T Consensus 93 ---~~fD~v~~~~~---l~~~---~~----------------~----------~~~l~~~~~~LkgG~~~~~~~~ 132 (261)
T 3ege_A 93 ---KSVDGVISILA---IHHF---SH----------------L----------EKSFQEMQRIIRDGTIVLLTFD 132 (261)
T ss_dssp ---TCBSEEEEESC---GGGC---SS----------------H----------HHHHHHHHHHBCSSCEEEEEEC
T ss_pred ---CCEeEEEEcch---Hhhc---cC----------------H----------HHHHHHHHHHhCCcEEEEEEcC
Confidence 68999997433 1111 11 1 3667777776667767776665
No 196
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.82 E-value=1.5e-08 Score=92.62 Aligned_cols=126 Identities=13% Similarity=0.021 Sum_probs=89.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++ ++.+..+|+..++ .. ++||.|
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-~~---~~fD~v 106 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-AI---DAYDAV 106 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC-CC---SCEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC-CC---CcEEEE
Confidence 3467899999999999999999876 369999999999999999887 3457789998877 22 789999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCh---------
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQV--------- 387 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~--------- 387 (441)
++... +.. ...+ ....+|..+.+.++ ||.++.+++.....
T Consensus 107 ~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 156 (211)
T 3e23_A 107 WAHAC------LLH-----------------VPRD-------ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYY 156 (211)
T ss_dssp EECSC------GGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEE
T ss_pred EecCc------hhh-----------------cCHH-------HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhc
Confidence 97432 211 0111 12467778878777 78888876654432
Q ss_pred --hcHHHHHHHhchhcCCC-eEEec
Q 013515 388 --ENEDVIKSVLPIAMSFG-FQLAT 409 (441)
Q Consensus 388 --ENe~vV~~~l~~~~~~~-~~~~~ 409 (441)
-+.+.+...++. .| |+++.
T Consensus 157 ~~~~~~~~~~~l~~---aG~f~~~~ 178 (211)
T 3e23_A 157 NYPSEEWLRARYAE---AGTWASVA 178 (211)
T ss_dssp CCCCHHHHHHHHHH---HCCCSEEE
T ss_pred cCCCHHHHHHHHHh---CCCcEEEE
Confidence 256667777753 35 65543
No 197
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.82 E-value=5.8e-09 Score=104.29 Aligned_cols=76 Identities=21% Similarity=0.316 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
.+|.+|||+|||+|..++.+|+. ++.+|+|+|.++ +++.++++++.+|+ ++|+++++|+.++... ++||+|+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp----e~~Dviv 154 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP----EQVDAIV 154 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SCEEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC----ccccEEE
Confidence 36899999999999998877764 457999999996 89999999999998 4699999999987643 6799999
Q ss_pred EcCC
Q 013515 319 LDPS 322 (441)
Q Consensus 319 ~DpP 322 (441)
.+.-
T Consensus 155 sE~~ 158 (376)
T 4hc4_A 155 SEWM 158 (376)
T ss_dssp CCCC
T ss_pred eecc
Confidence 7654
No 198
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.82 E-value=1.8e-08 Score=97.37 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=41.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 290 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g 290 (441)
++.+|||+|||+|..+..++...++ .+|+++|+++.+++.++++++..+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhh
Confidence 6889999999999999999998654 699999999999999999987655
No 199
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.81 E-value=1.4e-08 Score=95.78 Aligned_cols=93 Identities=13% Similarity=0.157 Sum_probs=76.3
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|..+......++..+++.++++|||+|||+|..|..+++.. ++|+++|+++.+++.++++++. .++++++++|+.
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~ 86 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDIL 86 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHH
Confidence 45555566667777888899999999999999999999873 7999999999999999998864 358999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCC
Q 013515 303 NLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPC 323 (441)
+++.... ..| .|+.|+|.
T Consensus 87 ~~~~~~~--~~~-~vv~nlPy 104 (244)
T 1qam_A 87 QFKFPKN--QSY-KIFGNIPY 104 (244)
T ss_dssp GCCCCSS--CCC-EEEEECCG
T ss_pred hCCcccC--CCe-EEEEeCCc
Confidence 8875421 345 68999996
No 200
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.81 E-value=1e-08 Score=106.04 Aligned_cols=79 Identities=22% Similarity=0.214 Sum_probs=67.8
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCcc
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ ++|+++.+|+.+++.. ++||
T Consensus 154 l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~----~~fD 226 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP----EQVD 226 (480)
T ss_dssp GGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SCEE
T ss_pred hhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC----CCeE
Confidence 44567899999999999999988874 446999999998 99999999999998 6899999999886532 5799
Q ss_pred EEEEcCC
Q 013515 316 AILLDPS 322 (441)
Q Consensus 316 ~Il~DpP 322 (441)
+|+++++
T Consensus 227 ~Ivs~~~ 233 (480)
T 3b3j_A 227 IIISEPM 233 (480)
T ss_dssp EEECCCC
T ss_pred EEEEeCc
Confidence 9998876
No 201
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.81 E-value=1.2e-08 Score=95.04 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=82.5
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
.+..++...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++... .++.++++|+..++...
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~--- 105 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQ--- 105 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCT---
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCC---
Confidence 4566777778999999999999999999876 334999999999999999887643 36899999998876432
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
++||.|++... +..-+| ...+|..+.+.++ ||.++.++
T Consensus 106 ~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 106 DSFDLAYSSLA------LHYVED--------------------------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TCEEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEecc------ccccch--------------------------HHHHHHHHHHhcCcCcEEEEEe
Confidence 68999997432 111011 1367777777777 68888765
No 202
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.81 E-value=2.8e-08 Score=93.26 Aligned_cols=74 Identities=30% Similarity=0.390 Sum_probs=64.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...|. ++.++++|+.+++.. ++||.|
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~----~~fD~v 109 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFK----NEFDAV 109 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCC----SCEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccC----CCccEE
Confidence 3467889999999999999999875 36899999999999999999998886 689999999887643 579999
Q ss_pred EE
Q 013515 318 LL 319 (441)
Q Consensus 318 l~ 319 (441)
++
T Consensus 110 ~~ 111 (252)
T 1wzn_A 110 TM 111 (252)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 203
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=1.1e-08 Score=97.84 Aligned_cols=78 Identities=15% Similarity=0.260 Sum_probs=65.0
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 310 (441)
..+...+.+.++.+|||+|||+|..+..++. ...+|+++|+++.+++.+++++ .++.+..+|+..++..
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~--- 115 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRVD--- 115 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCCS---
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCcC---
Confidence 3445667788899999999999999999988 3479999999999999998765 4678899999887642
Q ss_pred CCCccEEEEc
Q 013515 311 YSEVRAILLD 320 (441)
Q Consensus 311 ~~~fD~Il~D 320 (441)
++||.|++.
T Consensus 116 -~~fD~v~~~ 124 (279)
T 3ccf_A 116 -KPLDAVFSN 124 (279)
T ss_dssp -SCEEEEEEE
T ss_pred -CCcCEEEEc
Confidence 689999974
No 204
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.80 E-value=1.4e-08 Score=96.67 Aligned_cols=84 Identities=10% Similarity=0.025 Sum_probs=61.8
Q ss_pred hHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC--C
Q 013515 230 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP--K 307 (441)
Q Consensus 230 s~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~--~ 307 (441)
...+...+.+.+|.+|||+|||+|..+..+++. ..+|+++|+|+.|++.+++++... .+..|+.++.. .
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIP 104 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeecccccc
Confidence 345556778889999999999999999999886 369999999999999999987654 12233333332 1
Q ss_pred CCCCCCccEEEEcCC
Q 013515 308 DPAYSEVRAILLDPS 322 (441)
Q Consensus 308 ~~~~~~fD~Il~DpP 322 (441)
....++||.|+++..
T Consensus 105 ~~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 105 KELAGHFDFVLNDRL 119 (261)
T ss_dssp GGGTTCCSEEEEESC
T ss_pred cccCCCccEEEEhhh
Confidence 000257999998654
No 205
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.80 E-value=1.2e-08 Score=98.60 Aligned_cols=117 Identities=14% Similarity=0.189 Sum_probs=86.5
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeccCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA---ANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~---~~v~~~~~D~~~~~~~~ 308 (441)
.+...+.+.++ +|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+. .++.++++|+.+++..
T Consensus 74 ~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 148 (299)
T 3g2m_A 74 EFATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD- 148 (299)
T ss_dssp HHHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS-
T ss_pred HHHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC-
Confidence 34445554444 9999999999999999876 36899999999999999999998775 6899999999987652
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
++||.|++.. +++. . .+++ .+..+|..+.+.++ ||.|+.++....
T Consensus 149 ---~~fD~v~~~~-----~~~~-~----------------~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 149 ---KRFGTVVISS-----GSIN-E----------------LDEA-------DRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ---CCEEEEEECH-----HHHT-T----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ---CCcCEEEECC-----cccc-c----------------CCHH-------HHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 6899998521 1110 0 0121 23467788878777 788888876643
No 206
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.80 E-value=1.2e-08 Score=97.93 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCccE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
.+.+|||+|||+|+.+..++... +..+|+++|+++.+++.+++++..+ ++ ++++++.+|+....... .++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS--ENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC--CSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--CCCeeE
Confidence 46799999999999999888753 4579999999999999999998753 33 57999999987643222 167999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|++|+|.. .+. ++. + .+ .+++..+.+.|+ +|.++..+.+
T Consensus 152 Ii~d~~~~-~~~----~~~-l-----------~~-----------~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 152 IMVDSTEP-VGP----AVN-L-----------FT-----------KGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEESCSSC-CSC----CCC-C-----------ST-----------THHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCC-CCc----chh-h-----------hH-----------HHHHHHHHHhcCCCcEEEEEcCC
Confidence 99999852 221 110 0 00 256677777777 6888777655
No 207
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.80 E-value=1.8e-08 Score=88.73 Aligned_cols=125 Identities=14% Similarity=0.130 Sum_probs=88.3
Q ss_pred HHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 013515 235 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
..+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++ .+++.+..+| .+... ++|
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~---~~~ 76 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPD---NSV 76 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCT---TCE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCC---Cce
Confidence 44567789999999999999999998874 4999999999999999888 4578999999 22222 679
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChh-----
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVE----- 388 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~E----- 388 (441)
|.|++..... .-+ . ...+|+.+.+.++ +|.++.++......+
T Consensus 77 D~v~~~~~l~------~~~----------------~----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 124 (170)
T 3i9f_A 77 DFILFANSFH------DMD----------------D----------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPL 124 (170)
T ss_dssp EEEEEESCST------TCS----------------C----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCG
T ss_pred EEEEEccchh------ccc----------------C----------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchH
Confidence 9999653311 100 0 1366777777777 688887765543221
Q ss_pred ----cHHHHHHHhchhcCCCeEEecC
Q 013515 389 ----NEDVIKSVLPIAMSFGFQLATP 410 (441)
Q Consensus 389 ----Ne~vV~~~l~~~~~~~~~~~~~ 410 (441)
+.+.+.+.+ . +|+++..
T Consensus 125 ~~~~~~~~~~~~l----~-Gf~~~~~ 145 (170)
T 3i9f_A 125 SIRMDEKDYMGWF----S-NFVVEKR 145 (170)
T ss_dssp GGCCCHHHHHHHT----T-TEEEEEE
T ss_pred hhhcCHHHHHHHH----h-CcEEEEc
Confidence 245566665 2 8887653
No 208
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.79 E-value=1.4e-08 Score=95.23 Aligned_cols=135 Identities=13% Similarity=0.024 Sum_probs=94.1
Q ss_pred HHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 013515 235 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
..+...++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... .++.++++|+..++... ++|
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~---~~f 159 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLPP---NTY 159 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCCS---SCE
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCCC---CCe
Confidence 34456678999999999999999998874 468999999999999999987654 57999999998876443 689
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCC-------
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQ------- 386 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~------- 386 (441)
|+|++.- ++.. ...+ ....+|..+.+.++ ||.++.++.....
T Consensus 160 D~v~~~~------~l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 209 (254)
T 1xtp_A 160 DLIVIQW------TAIY-----------------LTDA-------DFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDK 209 (254)
T ss_dssp EEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEET
T ss_pred EEEEEcc------hhhh-----------------CCHH-------HHHHHHHHHHHhcCCCeEEEEEecCCCcccceecc
Confidence 9999632 2211 0111 13467778877777 7888887642211
Q ss_pred -----hhcHHHHHHHhchhcCCCeEEec
Q 013515 387 -----VENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 387 -----~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
.-+.+.+.+.|+. .||+++.
T Consensus 210 ~~~~~~~~~~~~~~~l~~---aGf~~~~ 234 (254)
T 1xtp_A 210 EDSSLTRSDIHYKRLFNE---SGVRVVK 234 (254)
T ss_dssp TTTEEEBCHHHHHHHHHH---HTCCEEE
T ss_pred cCCcccCCHHHHHHHHHH---CCCEEEE
Confidence 1134566666643 4666543
No 209
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.79 E-value=1.1e-09 Score=103.21 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=80.1
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|..+......++..+++.++++|||+|||+|..+..++... ++|+|+|+++.+++.++++++ +..+++++++|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 56666677778888888899999999999999999999872 799999999999999988776 3468999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCCCC
Q 013515 303 NLDPKDPAYSEVRAILLDPSCSGS 326 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCSg~ 326 (441)
+++... .++| .|+.|||+..+
T Consensus 86 ~~~~~~--~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 86 QFQFPN--KQRY-KIVGNIPYHLS 106 (245)
T ss_dssp TTTCCC--SSEE-EEEEECCSSSC
T ss_pred hcCccc--CCCc-EEEEeCCcccc
Confidence 877432 1468 89999998654
No 210
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.79 E-value=1.9e-08 Score=93.51 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=84.2
Q ss_pred HHHHHhCCC--CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC
Q 013515 232 MVAAALAPK--PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 309 (441)
Q Consensus 232 l~~~~l~~~--~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~ 309 (441)
.+..++... ++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+. ++.++++|+.+++..
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-- 99 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNIN-- 99 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCS--
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCcc--
Confidence 344444333 7889999999999999998876 25899999999999999999998886 789999999887643
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
++||.|++..- ++..-+ +.+ ....+|..+.+.++ ||.++.++.
T Consensus 100 --~~fD~v~~~~~-----~l~~~~----------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 100 --RKFDLITCCLD-----STNYII----------------DSD-------DLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp --CCEEEEEECTT-----GGGGCC----------------SHH-------HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred --CCceEEEEcCc-----cccccC----------------CHH-------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 67999997430 111100 111 12467888888887 677776543
No 211
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.78 E-value=1.2e-08 Score=94.91 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++.. .+|+++|+++.+++.+++++...+ .++.++++|+.+++.. ++||.|++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~----~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELELP----EPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCCS----SCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCCC----CCcCEEEE
Confidence 45789999999999999888764 689999999999999999998887 4789999999887532 67999997
Q ss_pred cC
Q 013515 320 DP 321 (441)
Q Consensus 320 Dp 321 (441)
..
T Consensus 103 ~~ 104 (243)
T 3d2l_A 103 LC 104 (243)
T ss_dssp CT
T ss_pred eC
Confidence 54
No 212
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.78 E-value=8.1e-09 Score=100.57 Aligned_cols=114 Identities=15% Similarity=0.129 Sum_probs=81.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCc
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
...+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... |+ ++++++.+|+....... .++|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~f 169 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN--QDAF 169 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC--SSCE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC--CCCc
Confidence 3457899999999999999998763 4579999999999999999998762 33 57999999987643221 1679
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|+|++|+|... + |.. ...+.++++.+.+.|+ +|.++..+.+
T Consensus 170 D~Ii~d~~~~~-~-----~~~----------------------~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 170 DVIITDSSDPM-G-----PAE----------------------SLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEEEECC---------------------------------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEECCCCCC-C-----cch----------------------hhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99999998421 1 000 0112467777778777 6887776644
No 213
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.78 E-value=2.1e-08 Score=93.31 Aligned_cols=104 Identities=17% Similarity=0.142 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++. ...++.++++|+.+++... ++||.|++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~---~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFEN---EQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCT---TCEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCC---CCccEEEE
Confidence 47889999999999999999886 368999999999999998874 3367999999999876543 68999996
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
... +..-+| + ..+|..+.+.++ ||.++.++...
T Consensus 123 ~~~------l~~~~~----------------~----------~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 123 INS------LEWTEE----------------P----------LRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp ESC------TTSSSC----------------H----------HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred cCh------HhhccC----------------H----------HHHHHHHHHHhCCCeEEEEEEcCC
Confidence 322 211111 1 366778878777 68888776443
No 214
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.77 E-value=1.2e-08 Score=107.08 Aligned_cols=171 Identities=14% Similarity=0.100 Sum_probs=108.9
Q ss_pred hcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC--------------CcEEEEEeCCHHHHHHHHH
Q 013515 219 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG--------------KGKIVACELNKERVRRLKD 284 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~--------------~~~V~a~D~~~~rl~~l~~ 284 (441)
..|.|+--..-+.+++.++.+.+| +|+|.|||+|++.+.++..+.. ...++|+|+++.++..++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 346776666778888999998887 9999999999998887765421 3589999999999999999
Q ss_pred HHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCccccc--ccCccCCCCCCCCCCCcccHHHHHHHHHHH
Q 013515 285 TIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE--RLDHLLPSHASGHTADPTEMERLNKLSAFQ 361 (441)
Q Consensus 285 ~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~--~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q 361 (441)
|+...|+. ++.+.++|....+... ..+||+|+.+||.+....... ..|.++........... +..-...+
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~--~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~-----~~~~~~~~ 374 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHP--DLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRIL-----TPPTGNAN 374 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCT--TCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEEC-----CCCTTCTH
T ss_pred HHHHhCCCcccceeccchhcCcccc--cccccEEEECCCcCCccccchhhhhhhhhhcCcccccccc-----cCCCcchh
Confidence 99999984 4444788877654322 268999999999976432110 01111110000000000 00001122
Q ss_pred HHHHHHHhCCCC-CcEEEEEc-CCC-CCh-hcHHHHHHHh
Q 013515 362 KKALRHALSFPG-VERVVYST-CSI-HQV-ENEDVIKSVL 397 (441)
Q Consensus 362 ~~lL~~a~~~~~-~G~lvYsT-CS~-~~~-ENe~vV~~~l 397 (441)
...+.++++.++ +|++++.+ -++ +.. -.+..+.+.|
T Consensus 375 ~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~L 414 (544)
T 3khk_A 375 FAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTL 414 (544)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHH
Confidence 357888988887 68766654 222 222 2466676666
No 215
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.76 E-value=6.2e-09 Score=102.20 Aligned_cols=113 Identities=18% Similarity=0.132 Sum_probs=82.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEeccCCCCCCCCCCCCCcc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G--AANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g--~~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
..+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++..+ + -++++++.+|+.+..... .++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--TNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--CSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc--CCCce
Confidence 456899999999999999998753 3579999999999999999998762 2 257999999987643211 16799
Q ss_pred EEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 316 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 316 ~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+|++|++.. .|. ++. ..+.++++.+.+.++ +|.++..+.+
T Consensus 192 vIi~d~~~p-~~~----~~~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 192 VIIVDSSDP-IGP----AET-----------------------LFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEECCCS-SSG----GGG-----------------------GSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCcCC-CCc----chh-----------------------hhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999998632 111 000 001467777777777 7888876544
No 216
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.75 E-value=1.8e-08 Score=96.91 Aligned_cols=123 Identities=13% Similarity=0.120 Sum_probs=87.0
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC----CcEEEEeccCCCCC-
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA----ANIEVLHGDFLNLD- 305 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~----~~v~~~~~D~~~~~- 305 (441)
..+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+. .++.+..+|+..++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 44555666678899999999999999999886 24999999999999999998765442 46788899988765
Q ss_pred --CCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 306 --PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 306 --~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
... ++||+|++... ..+.+ +|.. .+. .....+|..+.+.|+ ||.++.+++
T Consensus 124 ~~~~~---~~fD~V~~~g~--~l~~~---~~~~------------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 124 DVPAG---DGFDAVICLGN--SFAHL---PDSK------------GDQ-------SEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HSCCT---TCEEEEEECTT--CGGGS---CCSS------------SSS-------HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccC---CCeEEEEEcCh--HHhhc---Cccc------------cCH-------HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 332 68999996321 12211 1110 001 123568888988887 688887766
Q ss_pred C
Q 013515 383 S 383 (441)
Q Consensus 383 S 383 (441)
+
T Consensus 177 ~ 177 (293)
T 3thr_A 177 N 177 (293)
T ss_dssp C
T ss_pred C
Confidence 4
No 217
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.75 E-value=1.3e-08 Score=97.40 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=74.9
Q ss_pred cchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC
Q 013515 226 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 305 (441)
Q Consensus 226 Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~ 305 (441)
...-...++..+++.+| +|||+|||+|..|..+++.. ++|+|+|+|+.+++.+++++. + .+++++++|+.+++
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~--~-~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS--G-LPVRLVFQDALLYP 104 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT--T-SSEEEEESCGGGSC
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC--C-CCEEEEECChhhCC
Confidence 33445667778888999 99999999999999999862 689999999999999999876 2 58999999999887
Q ss_pred CCCCCCCCccEEEEcCCCC
Q 013515 306 PKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 306 ~~~~~~~~fD~Il~DpPCS 324 (441)
... ...+|.|+.++|..
T Consensus 105 ~~~--~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 105 WEE--VPQGSLLVANLPYH 121 (271)
T ss_dssp GGG--SCTTEEEEEEECSS
T ss_pred hhh--ccCccEEEecCccc
Confidence 542 13689999999975
No 218
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.75 E-value=2.4e-08 Score=92.59 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC-CCCCCCCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL-NLDPKDPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~-~~~~~~~~~~~fD~Il 318 (441)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..+++++++|+. .++... .++||.|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~--~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGL--GAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTC--CCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcC--CCCEEEEE
Confidence 67899999999999999999876 36999999999999999888 357899999995 444331 16899999
Q ss_pred Ec
Q 013515 319 LD 320 (441)
Q Consensus 319 ~D 320 (441)
+.
T Consensus 117 ~~ 118 (226)
T 3m33_A 117 SR 118 (226)
T ss_dssp EE
T ss_pred eC
Confidence 76
No 219
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.75 E-value=7.3e-09 Score=98.55 Aligned_cols=87 Identities=24% Similarity=0.338 Sum_probs=73.0
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC--C
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD--P 309 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~--~ 309 (441)
-++..|++++|+.++|++||.||+|..+++. .++|+|+|.|+.+++.+++ ++. ++++++++++.++.... .
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHT
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHc
Confidence 4556778999999999999999999999987 4899999999999999988 654 58999999999875211 1
Q ss_pred CCCCccEEEEcCCCCC
Q 013515 310 AYSEVRAILLDPSCSG 325 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg 325 (441)
...+||.|++|.++|.
T Consensus 86 g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 86 GVERVDGILADLGVSS 101 (285)
T ss_dssp TCSCEEEEEEECSCCH
T ss_pred CCCCcCEEEeCCcccc
Confidence 1257999999999987
No 220
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.74 E-value=1.1e-08 Score=97.10 Aligned_cols=112 Identities=11% Similarity=0.130 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
.+.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.+++ ..+|.++++|+.+++..+ ++||.|++-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~~~---~sfD~v~~~ 106 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGLPP---ASVDVAIAA 106 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCCCS---SCEEEEEEC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcccC---CcccEEEEe
Confidence 4679999999999999999876 2689999999999987653 257999999999988654 789999861
Q ss_pred CCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCCh--hcHHHHHHHh
Q 013515 321 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQV--ENEDVIKSVL 397 (441)
Q Consensus 321 pPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~--ENe~vV~~~l 397 (441)
.++ +.. .. .+.+..+.+.|+ ||.|+..+.+.... +-..++..+.
T Consensus 107 ------~~~-h~~----------------~~----------~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 4hg2_A 107 ------QAM-HWF----------------DL----------DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLY 153 (257)
T ss_dssp ------SCC-TTC----------------CH----------HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHH
T ss_pred ------eeh-hHh----------------hH----------HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHH
Confidence 122 110 11 135666777677 78887776654432 2334455554
No 221
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.73 E-value=1.8e-08 Score=99.39 Aligned_cols=118 Identities=19% Similarity=0.133 Sum_probs=85.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCC
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
....+.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++..+ |+ .+++++.+|+..+..... .++
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~-~~~ 194 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA-EGS 194 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSC-TTC
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhcc-CCC
Confidence 34457899999999999999998763 3479999999999999999998864 44 579999999876532111 157
Q ss_pred ccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 314 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 314 fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
||+|++|++... |. ++. ..+.+++..+.+.|+ ||.++..+.+..
T Consensus 195 fDlIi~d~~~p~-~~----~~~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 195 YDAVIVDSSDPI-GP----AKE-----------------------LFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp EEEEEECCCCTT-SG----GGG-----------------------GGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred ccEEEECCCCcc-Cc----chh-----------------------hhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 999999987311 10 000 012467778878777 788888755543
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.73 E-value=1.4e-08 Score=97.91 Aligned_cols=116 Identities=18% Similarity=0.142 Sum_probs=84.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeccCCCCCCCCCCCCC
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG----AANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
...++.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++..++ -++++++.+|+....... .++
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~ 151 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--TNT 151 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--CSC
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC--CCC
Confidence 3345789999999999999998875 345799999999999999999987653 367999999987653221 167
Q ss_pred ccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 314 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 314 fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
||+|++|++.. .|. ...+ .+.++++.+.+.|+ +|.++..+++.
T Consensus 152 fD~Ii~d~~~~-~~~-----~~~l----------------------~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 152 YDVIIVDSSDP-IGP-----AETL----------------------FNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EEEEEEECCCT-TTG-----GGGG----------------------SSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred ceEEEEcCCCC-CCc-----chhh----------------------hHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 99999998743 221 0000 11466777777777 78888877653
No 223
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.72 E-value=2.9e-08 Score=96.63 Aligned_cols=130 Identities=12% Similarity=0.061 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEeccCCCCCCCCCCCCCc
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS----GAANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
..++.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++..+ .-.+++++.+|+..+..... .++|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~f 170 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTP-DNTY 170 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSC-TTCE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhcc-CCce
Confidence 3567899999999999999998753 3479999999999999999988542 23579999999987653200 1679
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC-CCChhcHHH
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS-IHQVENEDV 392 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS-~~~~ENe~v 392 (441)
|+|++|++... + |+.. ..+.++++.+.+.|+ +|.++..+.+ ....+....
T Consensus 171 DvIi~d~~~~~-~-----~~~~----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 222 (304)
T 3bwc_A 171 DVVIIDTTDPA-G-----PASK----------------------LFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEK 222 (304)
T ss_dssp EEEEEECC-------------------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHH
T ss_pred eEEEECCCCcc-c-----cchh----------------------hhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHH
Confidence 99999987421 1 1000 012466777777777 6877765443 223333344
Q ss_pred HHHHhc
Q 013515 393 IKSVLP 398 (441)
Q Consensus 393 V~~~l~ 398 (441)
+.+.|+
T Consensus 223 ~~~~l~ 228 (304)
T 3bwc_A 223 MSRFIR 228 (304)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 224
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.71 E-value=3.8e-08 Score=95.75 Aligned_cols=111 Identities=9% Similarity=0.027 Sum_probs=74.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC------cEEEEeccCCC------CCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA------NIEVLHGDFLN------LDPKD 308 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~------~v~~~~~D~~~------~~~~~ 308 (441)
+|.+|||+|||+|+.+..++.. +.+.|+|+|+|+.+++.++++....+.. ++.+.+.|+.. ++...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5889999999999877665543 3468999999999999999998887753 36677777732 21111
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+ .++||+|++ .. ++.- . +..++ +..+|.++.+.|+ ||.++.+|..
T Consensus 126 ~-~~~FD~V~~----~~--~lhy---------~-------~~~~~-------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 Y-FGKFNIIDW----QF--AIHY---------S-------FHPRH-------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp C-SSCEEEEEE----ES--CGGG---------T-------CSTTT-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c-CCCeeEEEE----Cc--hHHH---------h-------CCHHH-------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1 268999973 22 1100 0 00011 1478888888887 7888887763
No 225
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.70 E-value=4.5e-08 Score=94.04 Aligned_cols=93 Identities=20% Similarity=0.258 Sum_probs=73.1
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 306 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~ 306 (441)
.-...++..+++.++++|||+|||+|..|..++..... .++|+|+|+++.+++.++++. ..+++++++|+.+++.
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDF 104 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCCh
Confidence 34556677888899999999999999999999988533 255999999999999999983 3589999999998874
Q ss_pred CCCCC-C--CccEEEEcCCCC
Q 013515 307 KDPAY-S--EVRAILLDPSCS 324 (441)
Q Consensus 307 ~~~~~-~--~fD~Il~DpPCS 324 (441)
..... . ..+.|+.++|..
T Consensus 105 ~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 105 GSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp GGGSCSSSSCCEEEEEECCHH
T ss_pred hHhcccccCCceEEEEccCcc
Confidence 32100 0 345799999963
No 226
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.70 E-value=1.5e-08 Score=97.88 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=73.4
Q ss_pred hCCCCCCEEEEEcC------CCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEE-EeccCCCCCCCCC
Q 013515 237 LAPKPGWKVLDACS------APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV-LHGDFLNLDPKDP 309 (441)
Q Consensus 237 l~~~~g~~VLDl~a------g~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~-~~~D~~~~~~~~~ 309 (441)
+.+++|++|||+|| |||+ ..++++++..++|+|+|+++. +.++++ +++|+.+++..
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~-- 121 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTA-- 121 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCS--
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCcc--
Confidence 35788999999999 6687 556777665689999999987 246778 99999876532
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
++||+|++|+++...|... .|. . + . ..+...+|+.+.+.|+ ||.++..+
T Consensus 122 --~~fD~Vvsn~~~~~~g~~~--~d~-----~-----~--~-------~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 122 --NKWDLIISDMYDPRTKHVT--KEN-----D-----S--K-------EGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp --SCEEEEEECCCCCC---CC--SCC-----C-----C--C-------CTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CcccEEEEcCCcccccccc--ccc-----c-----c--h-------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5799999998877666542 111 0 0 0 0123578888888887 68777643
No 227
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.70 E-value=5.4e-08 Score=89.19 Aligned_cols=106 Identities=16% Similarity=0.039 Sum_probs=76.7
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC---CCCCC
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL---DPKDP 309 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~---~~~~~ 309 (441)
+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ .++.+..+|+.++ +...
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~- 113 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPV- 113 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCC-
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccccc-
Confidence 333444566799999999999999998876 35899999999999999887 3456777887766 2222
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
..+||.|++..... .+|. ..+|..+.+.++ ||.++.++-
T Consensus 114 -~~~fD~v~~~~~l~-------~~~~--------------------------~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 114 -GKDYDLICANFALL-------HQDI--------------------------IELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp -CCCEEEEEEESCCC-------SSCC--------------------------HHHHHHHHHTEEEEEEEEEEEC
T ss_pred -CCCccEEEECchhh-------hhhH--------------------------HHHHHHHHHHhCCCeEEEEEec
Confidence 14699999754421 1111 367888888887 688887664
No 228
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.69 E-value=1.5e-08 Score=100.15 Aligned_cols=134 Identities=14% Similarity=0.093 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC---CC-----cEEEEeccCCCCCCCC-CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG---AA-----NIEVLHGDFLNLDPKD-PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g---~~-----~v~~~~~D~~~~~~~~-~~~ 311 (441)
.+.+|||+|+|.|+.+..+++. + ..+|+++|+++.+++.+++++..++ ++ +++++.+|+..+.... ...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4689999999999999988776 3 3799999999999999999976432 21 6999999998866421 001
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcH
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENE 390 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe 390 (441)
++||+|++|||-...|. . +..+ .-......++..+.+.|+ +|.++..+||.+..|.-
T Consensus 266 ~~fDvII~D~~d~P~~~---~------------------p~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~ 323 (364)
T 2qfm_A 266 REFDYVINDLTAVPIST---S------------------PEED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEAL 323 (364)
T ss_dssp CCEEEEEEECCSSCCCC---C-----------------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHH
T ss_pred CCceEEEECCCCcccCc---C------------------chhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHH
Confidence 67999999998411111 0 1111 113445566666677787 79999889998886666
Q ss_pred HHHHHHhc
Q 013515 391 DVIKSVLP 398 (441)
Q Consensus 391 ~vV~~~l~ 398 (441)
...++.|.
T Consensus 324 ~~~~~~l~ 331 (364)
T 2qfm_A 324 SLYEEQLG 331 (364)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 66666553
No 229
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.69 E-value=2.3e-08 Score=97.80 Aligned_cols=116 Identities=12% Similarity=0.027 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--C---CCcEEEEeccCCCCCCCCCCCCCc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G---AANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g---~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
..+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... | -++++++.+|+....... .++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT--EERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC--CCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc--CCCc
Confidence 356899999999999999998763 3479999999999999999998762 2 368999999998743211 1679
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|+|++|++... +. ...++. ....+++..+.+.|+ ||.++..+.+
T Consensus 153 D~Ii~d~~~~~-~~-~~~~~~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 153 DVVIIDLTDPV-GE-DNPARL-----------------------LYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEEEEECCCCB-ST-TCGGGG-----------------------GSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEECCCCcc-cc-cCcchh-----------------------ccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99999987532 10 000000 002467888888887 6877766544
No 230
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.68 E-value=2.2e-08 Score=90.04 Aligned_cols=73 Identities=11% Similarity=-0.056 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
.+.++|||+|||+|..++.++...+. .+++|+|+|+.+++.+++++.++|+. ++++ .|.....+. ++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~-a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~----~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEK-IIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYK----GTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCC-CEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTT----SEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCC-CEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCC----CCcChhh
Confidence 45779999999999999988776544 59999999999999999999999997 6766 555433222 6799997
Q ss_pred E
Q 013515 319 L 319 (441)
Q Consensus 319 ~ 319 (441)
+
T Consensus 121 a 121 (200)
T 3fzg_A 121 L 121 (200)
T ss_dssp E
T ss_pred H
Confidence 5
No 231
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.68 E-value=4.1e-08 Score=91.25 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=78.8
Q ss_pred HHHHhC-CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 233 VAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 233 ~~~~l~-~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
+...+. ..++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++.. ++.++++|+.++. .+
T Consensus 33 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~-~~--- 101 (250)
T 2p7i_A 33 MVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ-LP--- 101 (250)
T ss_dssp HHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC-CS---
T ss_pred HHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC-cC---
Confidence 333443 3578899999999999999888752 4799999999999999887643 7899999998873 22
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEEcC
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPG-VERVVYSTC 382 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~-~~~~-~G~lvYsTC 382 (441)
++||+|++. +++..-+| + ..+|..+. +.++ ||.++.++.
T Consensus 102 ~~fD~v~~~------~~l~~~~~----------------~----------~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 102 RRYDNIVLT------HVLEHIDD----------------P----------VALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp SCEEEEEEE------SCGGGCSS----------------H----------HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CcccEEEEh------hHHHhhcC----------------H----------HHHHHHHHHHhcCCCCEEEEEcC
Confidence 689999963 22221111 1 36788888 8887 687777664
No 232
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.68 E-value=2.8e-08 Score=93.91 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=74.5
Q ss_pred ccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 223 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 223 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
|.....-...++..+++.++++|||+|||+|..|..+++. +..+|+|+|+|+.+++.++++ +..+++++++|+.
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDAS 86 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchh
Confidence 3344445566777888889999999999999999999875 347999999999999999887 3468999999999
Q ss_pred CCCCCCCCCCCccEEEEcCCCC
Q 013515 303 NLDPKDPAYSEVRAILLDPSCS 324 (441)
Q Consensus 303 ~~~~~~~~~~~fD~Il~DpPCS 324 (441)
+++..+. ... ..|+.++|..
T Consensus 87 ~~~~~~~-~~~-~~vv~NlPy~ 106 (249)
T 3ftd_A 87 KFPFCSL-GKE-LKVVGNLPYN 106 (249)
T ss_dssp TCCGGGS-CSS-EEEEEECCTT
T ss_pred hCChhHc-cCC-cEEEEECchh
Confidence 8875431 123 4899999974
No 233
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.68 E-value=1e-07 Score=88.31 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++ .++.++++|+.+++. . ++||.|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-~---~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL-G---RKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-S---SCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-C---CCCcEEEE
Confidence 568899999999999999999874 38999999999999998864 468899999988764 2 67999984
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
+. +++..-+ +++ ....+|..+.+.++ ||.++.+++..
T Consensus 107 ----~~-~~~~~~~----------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 107 ----MF-SSVGYLK----------------TTE-------ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp ----CT-TGGGGCC----------------SHH-------HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred ----cC-chHhhcC----------------CHH-------HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 21 1221100 112 22467888888887 78888877654
No 234
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.67 E-value=1e-07 Score=92.77 Aligned_cols=113 Identities=15% Similarity=0.046 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh-------CCCcEEEEeccCCCCC----CCC
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-------GAANIEVLHGDFLNLD----PKD 308 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~-------g~~~v~~~~~D~~~~~----~~~ 308 (441)
.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++.... +..++.++++|+...+ ..+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36889999999999999998874 3579999999999999999998876 4458999999998875 211
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
+ .++||.|++.- ++..-. .+.+ ....+|..+.+.++ ||.++.+|..
T Consensus 111 ~-~~~fD~V~~~~------~l~~~~---------------~~~~-------~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 111 P-QMCFDICSCQF------VCHYSF---------------ESYE-------QADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp T-TCCEEEEEEET------CGGGGG---------------GSHH-------HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred C-CCCEEEEEEec------chhhcc---------------CCHH-------HHHHHHHHHHHHhCCCcEEEEecCC
Confidence 1 24899999632 110000 0111 12477888888887 6888877654
No 235
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.66 E-value=4.4e-08 Score=89.28 Aligned_cols=98 Identities=14% Similarity=0.025 Sum_probs=73.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
++.+|||+|||+|..+..+ +..+|+++|+++.+++.++++. .++.++++|+.+++... ++||.|++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~---~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPG---ESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCS---SCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCC---CcEEEEEEc
Confidence 7899999999999988766 2238999999999999998876 46789999998876443 689999965
Q ss_pred CCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 321 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 321 pPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
.. +..-+| ...+|..+.+.++ ||.++.++..
T Consensus 103 ~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 103 TT------LEFVED--------------------------VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SC------TTTCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Ch------hhhcCC--------------------------HHHHHHHHHHHcCCCCEEEEEecC
Confidence 32 211011 1367777777777 6888877654
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.66 E-value=1.7e-08 Score=98.71 Aligned_cols=115 Identities=16% Similarity=0.119 Sum_probs=81.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCcc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
..+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... |+ ++++++.+|+....... .++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~--~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH--KNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC--TTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc--CCCce
Confidence 346799999999999999998763 4579999999999999999998764 33 57999999987643221 26799
Q ss_pred EEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 316 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 316 ~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
+|++|++.. .| |+. ...+.++++.+.+.|+ +|.++..+.+..
T Consensus 184 ~Ii~d~~~~-~~-----~~~----------------------~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 184 VIITDSSDP-VG-----PAE----------------------SLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp EEEECCC-----------------------------------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred EEEEcCCCC-CC-----cch----------------------hhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 999999732 11 000 0012467777877777 788887765543
No 237
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.65 E-value=1.3e-08 Score=98.87 Aligned_cols=91 Identities=20% Similarity=0.328 Sum_probs=74.7
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC--C
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP--A 310 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~--~ 310 (441)
++..|.++||+.++|+++|.||.|..+++.+++.|+|+|+|.++.+++.++ ++ .-++++++++++.++..... .
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHHHhcC
Confidence 456778999999999999999999999999888899999999999999884 33 33689999999988753211 0
Q ss_pred C-CCccEEEEcCCCCCCc
Q 013515 311 Y-SEVRAILLDPSCSGSG 327 (441)
Q Consensus 311 ~-~~fD~Il~DpPCSg~G 327 (441)
. +++|.||+|-.||+.-
T Consensus 125 ~~~~vDgILfDLGVSS~Q 142 (347)
T 3tka_A 125 LIGKIDGILLDLGVSSPQ 142 (347)
T ss_dssp CTTCEEEEEEECSCCHHH
T ss_pred CCCcccEEEECCccCHHH
Confidence 1 3699999999999753
No 238
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.65 E-value=7.8e-08 Score=103.18 Aligned_cols=159 Identities=13% Similarity=0.136 Sum_probs=98.5
Q ss_pred cCcccccchhhHHHHHH----hCC--CCCCEEEEEcCCCchHHHHHHHHhc--CCcEEEEEeCCHHHHHHH--HHHHHH-
Q 013515 220 NGCVFLQGKASSMVAAA----LAP--KPGWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKERVRRL--KDTIKL- 288 (441)
Q Consensus 220 ~g~~~~Qd~ss~l~~~~----l~~--~~g~~VLDl~ag~G~kt~~la~~~~--~~~~V~a~D~~~~rl~~l--~~~~~~- 288 (441)
.|.|+--..-+.+++.+ +.. .++.+|||.|||+|++.+.++..++ ....++|+|+++.+++.+ +.++..
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 35554444445555555 332 3688999999999999999988764 236899999999999998 666554
Q ss_pred ---hCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHH--------
Q 013515 289 ---SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL-------- 357 (441)
Q Consensus 289 ---~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l-------- 357 (441)
.|+.+..+...|+....... ..+||+|+.+||.++...... + ..+....+
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~~~~--~~kFDVVIgNPPYg~~~~~~~--e---------------~kd~~~r~~~g~p~~p 434 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLNPED--FANVSVVVMNPPYVSGVTDPA--I---------------KRKFAHKIIQLTGNRP 434 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCCGGG--GTTEEEEEECCBCCSSCCCHH--H---------------HHHHHHHHHHHHSSCC
T ss_pred hhhcCCCcceEEecchhcccccc--cCCCCEEEECCCccccccchh--h---------------hhhHHHHhhhhccccc
Confidence 34444456667776543221 267999999999865321100 0 00000011
Q ss_pred ------HHHHHHHHHHHhCCCC-CcEEEEEcCC-CCC--hhcHHHHHHHh
Q 013515 358 ------SAFQKKALRHALSFPG-VERVVYSTCS-IHQ--VENEDVIKSVL 397 (441)
Q Consensus 358 ------~~~Q~~lL~~a~~~~~-~G~lvYsTCS-~~~--~ENe~vV~~~l 397 (441)
......++.+++++++ +|++++.+=+ +.. ...+.-+.+.|
T Consensus 435 ~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~L 484 (878)
T 3s1s_A 435 QTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFL 484 (878)
T ss_dssp SSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHH
Confidence 1245678899998877 7877665433 321 22355666665
No 239
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.65 E-value=1.1e-08 Score=98.33 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHH---HHhCCCcEEEE--eccCCCCCCCCCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI---KLSGAANIEVL--HGDFLNLDPKDPAYSE 313 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~---~~~g~~~v~~~--~~D~~~~~~~~~~~~~ 313 (441)
+++|.+|||+|||||+.+..+++. ++|+|+|+++ ++..++++. +..| .++.++ ++|+..++ . ++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~--~---~~ 148 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKME--P---FQ 148 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGCC--C---CC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhCC--C---CC
Confidence 468999999999999999998876 6899999998 533222110 0011 168888 89998865 2 67
Q ss_pred ccEEEEcCC
Q 013515 314 VRAILLDPS 322 (441)
Q Consensus 314 fD~Il~DpP 322 (441)
||.|++|..
T Consensus 149 fD~Vvsd~~ 157 (276)
T 2wa2_A 149 ADTVLCDIG 157 (276)
T ss_dssp CSEEEECCC
T ss_pred cCEEEECCC
Confidence 999999977
No 240
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.63 E-value=1.5e-08 Score=96.80 Aligned_cols=73 Identities=15% Similarity=0.045 Sum_probs=54.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHH---HHhCCCcEEEE--eccCCCCCCCCCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI---KLSGAANIEVL--HGDFLNLDPKDPAYSE 313 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~---~~~g~~~v~~~--~~D~~~~~~~~~~~~~ 313 (441)
+++|.+|||+|||||+.+..+++. ++|+|+|+++ ++..+++.. +.+| .++.++ ++|+.+++ . ++
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~--~---~~ 140 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP--V---ER 140 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC--C---CC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC--C---CC
Confidence 568999999999999999988875 6899999998 432221110 0111 167888 89998875 2 67
Q ss_pred ccEEEEcCC
Q 013515 314 VRAILLDPS 322 (441)
Q Consensus 314 fD~Il~DpP 322 (441)
||.|++|..
T Consensus 141 fD~V~sd~~ 149 (265)
T 2oxt_A 141 TDVIMCDVG 149 (265)
T ss_dssp CSEEEECCC
T ss_pred CcEEEEeCc
Confidence 999999977
No 241
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.62 E-value=4.2e-07 Score=90.23 Aligned_cols=119 Identities=11% Similarity=0.060 Sum_probs=88.5
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDP 306 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~-v~~~~~D~~~~~~ 306 (441)
.....+...++..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.++++++..|+.+ |+++.+|+.+.+.
T Consensus 177 ~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 177 FAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC
T ss_pred hhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC
Confidence 3344555666777889999999999999999998853 479999999 999999999999998854 9999999987643
Q ss_pred CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 307 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 307 ~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
. .+|+|++.- ++.. +.. ....++|+++.+.++ ||.++.....
T Consensus 255 ~-----~~D~v~~~~------vlh~-----------------~~d-------~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 255 P-----EADAVLFCR------ILYS-----------------ANE-------QLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp C-----CCSEEEEES------CGGG-----------------SCH-------HHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred C-----CCCEEEEec------hhcc-----------------CCH-------HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 2 349998722 2211 111 123578899999887 6877655433
No 242
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.58 E-value=2.6e-07 Score=90.42 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=68.7
Q ss_pred HHHHHhCC--CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCC
Q 013515 232 MVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKD 308 (441)
Q Consensus 232 l~~~~l~~--~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~ 308 (441)
.+...++. .++.+|||+|||+|..+..+++.. +..+++++|++ .+++.+++++...|+. +|+++.+|+.+.+..
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 230 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG- 230 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC-
Confidence 44445566 778999999999999999999886 34799999999 9999999999999884 699999999876432
Q ss_pred CCCCCccEEEE
Q 013515 309 PAYSEVRAILL 319 (441)
Q Consensus 309 ~~~~~fD~Il~ 319 (441)
..||+|++
T Consensus 231 ---~~~D~v~~ 238 (335)
T 2r3s_A 231 ---NDYDLVLL 238 (335)
T ss_dssp ---SCEEEEEE
T ss_pred ---CCCcEEEE
Confidence 34999997
No 243
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.57 E-value=1.3e-07 Score=89.47 Aligned_cols=100 Identities=15% Similarity=0.090 Sum_probs=74.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++.. .+ ++.+|+.+++... ++||.|++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~~---~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFPS---GAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSCT---TCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCCC---CCEEEEEEc
Confidence 7889999999999999998875 3689999999999999988754 23 7788998876433 689999864
Q ss_pred CCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 321 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 321 pPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
... -..+ .-...+|..+.+.++ ||.++.++.+
T Consensus 122 ~~~------~~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 122 GDV------LSYV-------------------------ENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SSH------HHHC-------------------------SCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred chh------hhcc-------------------------ccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 321 0000 002467778878777 7888877655
No 244
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=1.1e-07 Score=88.93 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=62.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC--CCCCcc
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP--AYSEVR 315 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~--~~~~fD 315 (441)
.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++ ...++.++++|+.+++.... ....||
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCcc
Confidence 35788999999999999999999874 28999999999999999876 33589999999987653210 002489
Q ss_pred EEEEcCC
Q 013515 316 AILLDPS 322 (441)
Q Consensus 316 ~Il~DpP 322 (441)
+|++...
T Consensus 127 ~v~~~~~ 133 (245)
T 3ggd_A 127 NIYMRTG 133 (245)
T ss_dssp EEEEESS
T ss_pred EEEEcch
Confidence 9987644
No 245
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.55 E-value=8.9e-07 Score=88.12 Aligned_cols=83 Identities=23% Similarity=0.224 Sum_probs=68.6
Q ss_pred HHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCC
Q 013515 231 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDP 309 (441)
Q Consensus 231 ~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 309 (441)
..+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+. +|+++.+|+.+..+
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 246 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP--- 246 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC---
Confidence 344455667788999999999999999999885 3479999999 99999999999999885 89999999975211
Q ss_pred CCCCccEEEEc
Q 013515 310 AYSEVRAILLD 320 (441)
Q Consensus 310 ~~~~fD~Il~D 320 (441)
..||+|++.
T Consensus 247 --~~~D~v~~~ 255 (374)
T 1qzz_A 247 --VTADVVLLS 255 (374)
T ss_dssp --CCEEEEEEE
T ss_pred --CCCCEEEEe
Confidence 249999874
No 246
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.54 E-value=1.2e-07 Score=89.88 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++..++ ..+|+++|+++.+++.++++. .++.+..+|+..++..+ ++||.|++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~---~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSD---TSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCT---TCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCC---CceeEEEE
Confidence 5789999999999999999998763 469999999999999987763 46788999998876443 68999996
No 247
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.54 E-value=1.6e-07 Score=89.36 Aligned_cols=99 Identities=7% Similarity=-0.176 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEeccCCCCCCCCCCCCCcc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS----GAANIEVLHGDFLNLDPKDPAYSEVR 315 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~~fD 315 (441)
..+.+|||+|||+|+.+..++.. + .+|+++|+++.+++.+++++... .-++++++.+|+..+. ++||
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------~~fD 141 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------KKYD 141 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------CCEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------hhCC
Confidence 34679999999999999988876 4 79999999999999999876432 2257999999998764 4699
Q ss_pred EEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 316 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 316 ~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
+|++|.+ .| . ..+..+.+.|+ ||.++..+++.
T Consensus 142 ~Ii~d~~---------dp------------------~----------~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 142 LIFCLQE---------PD------------------I----------HRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp EEEESSC---------CC------------------H----------HHHHHHHTTEEEEEEEEEEEECT
T ss_pred EEEECCC---------Ch------------------H----------HHHHHHHHhcCCCcEEEEEcCCc
Confidence 9999953 11 0 16777888887 78888776553
No 248
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.53 E-value=1.3e-06 Score=87.01 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..+.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+ ++|+++.+|+.+.....+ +.||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p--~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP--TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC--CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC--CCcCEEE
Confidence 457899999999999999999885 4479999999 9999999999998887 579999999987521111 5799998
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
+-- ++-. |..++ ...+|+++.+.++ ||.|+......
T Consensus 254 ~~~------vlh~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 254 MSQ------FLDC-----------------FSEEE-------VISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp EES------CSTT-----------------SCHHH-------HHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred Eec------hhhh-----------------CCHHH-------HHHHHHHHHHhcCCCcEEEEEeecc
Confidence 522 1100 11221 2467888888666 78777655443
No 249
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.53 E-value=1.2e-07 Score=92.48 Aligned_cols=112 Identities=12% Similarity=0.027 Sum_probs=81.9
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCC
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpP 322 (441)
.+|||+|||.|+.+..+++... ..+|+++|+++.+++.+++++...+-.+++++++|+..+..... .++||+|++|.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFT-PASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCC-TTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhcc-CCCCCEEEECCC
Confidence 4999999999999999998654 46999999999999999998865444689999999987642211 167999999976
Q ss_pred CCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 323 CSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 323 CSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
... +. |.. . . ..++++.+.+.|+ +|.++..+.+.
T Consensus 169 ~~~-~~----~~~-----L-------~-----------t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 169 AGA-IT----PQN-----F-------T-----------TVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp TTS-CC----CGG-----G-------S-----------BHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred Ccc-cc----chh-----h-------h-----------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 431 21 110 0 0 1366777777777 78877766543
No 250
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.52 E-value=1.8e-06 Score=86.06 Aligned_cols=115 Identities=17% Similarity=0.123 Sum_probs=85.3
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCC
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~ 311 (441)
+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+ ++|++..+|+... .+
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---~p-- 266 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---IP-- 266 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC---CC--
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC---CC--
Confidence 3445566778999999999999999999885 4579999999 9999999999999887 6799999999732 11
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
..||+|++-- ++.. +..+ ...++|+++.+.++ ||+|+......
T Consensus 267 ~~~D~v~~~~------vlh~-----------------~~d~-------~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 267 DGADVYLIKH------VLHD-----------------WDDD-------DVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp SSCSEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred CCceEEEhhh------hhcc-----------------CCHH-------HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2699998622 2210 1111 12478999999887 67776655443
No 251
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.52 E-value=1.8e-07 Score=88.32 Aligned_cols=102 Identities=18% Similarity=0.137 Sum_probs=75.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. ++.++++|+.+++. . ++||+|++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~-~---~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL-G---RRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC-S---CCEEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc-c---CCcCEEEE
Confidence 45789999999999999988876 2589999999999999988753 67899999998765 2 68999996
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
... ++..- .++++ ...+|..+.+.++ ||.++.++
T Consensus 117 ~~~-----~l~~~----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 117 MFS-----SIGHL----------------AGQAE-------LDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CTT-----GGGGS----------------CHHHH-------HHHHHHHHHHTEEEEEEEEECC
T ss_pred cCc-----hhhhc----------------CCHHH-------HHHHHHHHHHhcCCCcEEEEEe
Confidence 431 12110 01222 2467888888887 67777653
No 252
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.52 E-value=2.4e-07 Score=89.27 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eccCCCCCCCCCCCCCccEEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~-~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
+|.+|||+|||||++|..+++. +.++|+|+|+++.|++.+.++ . .++... ..++..+....-...+||.|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchhhCCCCCCCEEEE
Confidence 5789999999999999998886 457999999999999874322 1 233222 3455444432111235999999
Q ss_pred cCCC
Q 013515 320 DPSC 323 (441)
Q Consensus 320 DpPC 323 (441)
|...
T Consensus 158 d~sf 161 (291)
T 3hp7_A 158 DVSF 161 (291)
T ss_dssp CCSS
T ss_pred EeeH
Confidence 8763
No 253
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.52 E-value=1.5e-07 Score=90.72 Aligned_cols=109 Identities=13% Similarity=0.118 Sum_probs=72.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhc---CCcEE--EEEeCCHHHHHHHHHHHHHh-CCCcEEE--EeccCCCCC-----
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMK---GKGKI--VACELNKERVRRLKDTIKLS-GAANIEV--LHGDFLNLD----- 305 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~---~~~~V--~a~D~~~~rl~~l~~~~~~~-g~~~v~~--~~~D~~~~~----- 305 (441)
+.++.+|||+|||+|..+..++..+. +...| +++|+|++|++.+++++... ++.++.+ ..+++..+.
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 45788999999999988876544331 34544 99999999999999998764 5666655 455554432
Q ss_pred -CCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 306 -PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 306 -~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
..+ ++||.|++- .++..-+| + ...|....++|+ ||.++.++.
T Consensus 130 ~~~~---~~fD~V~~~------~~l~~~~d----------------~----------~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 130 KKEL---QKWDFIHMI------QMLYYVKD----------------I----------PATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TTCC---CCEEEEEEE------SCGGGCSC----------------H----------HHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCC---CceeEEEEe------eeeeecCC----------------H----------HHHHHHHHHHcCCCcEEEEEEe
Confidence 112 679999851 11211111 1 357888888887 687776643
No 254
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.51 E-value=1.1e-07 Score=88.64 Aligned_cols=101 Identities=13% Similarity=0.078 Sum_probs=73.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC--CCCCCCCCCccE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL--DPKDPAYSEVRA 316 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~--~~~~~~~~~fD~ 316 (441)
..++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ +.++.+|+.+. +..+ ++||+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~---~~fD~ 104 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPD---KYLDG 104 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCT---TCBSE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCC---CCeeE
Confidence 467899999999999999999886 25799999999999988776 56888888775 3222 68999
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
|++. +++..-++ . ....+|..+.+.++ ||.++.++..
T Consensus 105 i~~~------~~l~~~~~-----------------~-------~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 105 VMIS------HFVEHLDP-----------------E-------RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEEE------SCGGGSCG-----------------G-------GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EEEC------CchhhCCc-----------------H-------HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9963 23221110 0 01366777777776 7888877654
No 255
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.50 E-value=6.8e-08 Score=91.43 Aligned_cols=91 Identities=11% Similarity=0.170 Sum_probs=70.0
Q ss_pred hhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 228 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 228 ~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.-...++..+++.+|++|||+|||+|..|. ++. ....+|+|+|+++.+++.+++++... ++++++++|+..++..
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHH
Confidence 344566677788999999999999999999 643 22233999999999999999887643 5899999999987632
Q ss_pred CCCC---CCccEEEEcCCCC
Q 013515 308 DPAY---SEVRAILLDPSCS 324 (441)
Q Consensus 308 ~~~~---~~fD~Il~DpPCS 324 (441)
.. + ...|.|+.++|..
T Consensus 83 ~~-~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 83 EL-AEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HH-HHHHTSCEEEEEECCTT
T ss_pred Hh-hcccCCceEEEECCCCC
Confidence 10 0 1347999999975
No 256
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.50 E-value=3.7e-07 Score=95.43 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=85.4
Q ss_pred hcCcccccchhhHHHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcC------------CcEEEEEeCCHHHHHHHHHHH
Q 013515 219 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG------------KGKIVACELNKERVRRLKDTI 286 (441)
Q Consensus 219 ~~g~~~~Qd~ss~l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~------------~~~V~a~D~~~~rl~~l~~~~ 286 (441)
+.|.|+=-..-+.+++.++++++|++|+|-|||+|++.+.+...+.. ...++++|+++.....++-|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 34665554566788899999999999999999999998887776532 246999999999999999999
Q ss_pred HHhCCCcEEEEeccCCCCCCCC-CCCCCccEEEEcCCCCCC
Q 013515 287 KLSGAANIEVLHGDFLNLDPKD-PAYSEVRAILLDPSCSGS 326 (441)
Q Consensus 287 ~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~Il~DpPCSg~ 326 (441)
-..|+..-.+.++|....+... ....+||+||.+||.++.
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 9999876667888887654221 112579999999998754
No 257
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.49 E-value=1.9e-07 Score=85.88 Aligned_cols=63 Identities=21% Similarity=0.209 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
++.+|||+|||+|..+..++.. +++|+++.+++.++++ ++.++.+|+..++... ++||+|++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~---~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKD---ESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCT---TCEEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCC---CCeeEEEEc
Confidence 3889999999999998876432 9999999999998876 4678899998876432 679999975
No 258
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.48 E-value=1.6e-07 Score=89.23 Aligned_cols=114 Identities=17% Similarity=0.076 Sum_probs=76.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC--C------------------------
Q 013515 238 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG--A------------------------ 291 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g--~------------------------ 291 (441)
.+.+|.+|||+|||+|..+..++.. +...|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999887765543 23479999999999999998775431 1
Q ss_pred ---CcEE-EEeccCCCCCCCC-CCCCCccEEEEcCCCCCCccccc-ccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHH
Q 013515 292 ---ANIE-VLHGDFLNLDPKD-PAYSEVRAILLDPSCSGSGTAAE-RLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 365 (441)
Q Consensus 292 ---~~v~-~~~~D~~~~~~~~-~~~~~fD~Il~DpPCSg~G~~~~-~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL 365 (441)
.+|. ++.+|+.+..+.. ...++||+|++- .++-. .+ +. .-...+|
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~------~~l~~i~~----------------~~-------~~~~~~l 180 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL------LAMECACC----------------SL-------DAYRAAL 180 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE------SCHHHHCS----------------SH-------HHHHHHH
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeeh------HHHHHhcC----------------CH-------HHHHHHH
Confidence 1344 8889998743211 012589999851 11100 00 01 1124688
Q ss_pred HHHhCCCC-CcEEEEEcC
Q 013515 366 RHALSFPG-VERVVYSTC 382 (441)
Q Consensus 366 ~~a~~~~~-~G~lvYsTC 382 (441)
.+..++|| ||.++.++.
T Consensus 181 ~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 181 CNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEe
Confidence 99999888 788888863
No 259
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.46 E-value=7.4e-07 Score=88.31 Aligned_cols=115 Identities=19% Similarity=0.156 Sum_probs=85.1
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 310 (441)
.+...++..++.+|||+|||+|..+..++... +..+++++|+ +.+++.++++++..|+. +|+++.+|+.+..+
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 247 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP---- 247 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS----
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC----
Confidence 34456667788999999999999999999885 4479999999 99999999999999885 89999999875221
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
..||.|++.-. +.. +... ...++|+++.+.++ ||.++.+...
T Consensus 248 -~~~D~v~~~~v------l~~-----------------~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 248 -RKADAIILSFV------LLN-----------------WPDH-------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp -SCEEEEEEESC------GGG-----------------SCHH-------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCccEEEEccc------ccC-----------------CCHH-------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 34999986332 110 1111 12467888888877 6777665544
No 260
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.46 E-value=3.1e-07 Score=84.23 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.++.+|||+|||+|..+..++.. + .+++++|+++.+++.++++. ..+..+|+.+.....+ .++||.|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~-~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYE-EEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSC-TTCEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCC-CCccCEEEE
Confidence 67899999999999999999876 3 79999999999999887654 2578889876432221 267999997
Q ss_pred cCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 320 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 320 DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
.- ++..-+| + ..+|..+.+.++ ||.++.++-
T Consensus 100 ~~------~l~~~~~----------------~----------~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 100 GD------VLEHLFD----------------P----------WAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp ES------CGGGSSC----------------H----------HHHHHHTGGGEEEEEEEEEEEE
T ss_pred CC------hhhhcCC----------------H----------HHHHHHHHHHcCCCCEEEEEeC
Confidence 42 2211111 1 367888888877 688777653
No 261
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.44 E-value=1.9e-07 Score=87.92 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=89.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC---------------------------
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA--------------------------- 291 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~--------------------------- 291 (441)
..+|.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++...+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 4578899999999999998887652 25899999999999999988765431
Q ss_pred --CcE-EEEeccCCCCCC-CCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 013515 292 --ANI-EVLHGDFLNLDP-KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH 367 (441)
Q Consensus 292 --~~v-~~~~~D~~~~~~-~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~ 367 (441)
.++ .+..+|+.+..+ .....++||+|++.- ++..-+ ........+|..
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~------~l~~~~----------------------~~~~~~~~~l~~ 183 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL------CLDAAC----------------------PDLPAYRTALRN 183 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES------CHHHHC----------------------SSHHHHHHHHHH
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhh------hhhhhc----------------------CChHHHHHHHHH
Confidence 127 899999988654 211125799998531 111000 001123577888
Q ss_pred HhCCCC-CcEEEEEcCCC------------CChhcHHHHHHHhchhcCCCeEEec
Q 013515 368 ALSFPG-VERVVYSTCSI------------HQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 368 a~~~~~-~G~lvYsTCS~------------~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
+.++++ ||.++.++..- ...-+++.+...|+ ..||+++.
T Consensus 184 ~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~aGf~~~~ 235 (265)
T 2i62_A 184 LGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVE---EAGYTIEQ 235 (265)
T ss_dssp HHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHH---HTTCEEEE
T ss_pred HHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHH---HCCCEEEE
Confidence 889887 68877765321 11124556666664 35777654
No 262
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.40 E-value=1.2e-06 Score=86.50 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=83.2
Q ss_pred HhCCCC-CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCC
Q 013515 236 ALAPKP-GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 236 ~l~~~~-g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
.++..+ +.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...++ ++|+++.+|+.+.+...+ ..
T Consensus 173 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~ 248 (352)
T 3mcz_A 173 ELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG--GA 248 (352)
T ss_dssp TCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT--CC
T ss_pred hCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC--CC
Confidence 344455 88999999999999999998854 479999999 8899999999999887 469999999987652111 56
Q ss_pred ccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 314 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 314 fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
||+|++- .++.. +..++ ...+|+++.+.++ ||.|+....
T Consensus 249 ~D~v~~~------~vlh~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 249 ADVVMLN------DCLHY-----------------FDARE-------AREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EEEEEEE------SCGGG-----------------SCHHH-------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccEEEEe------ccccc-----------------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999962 22211 11211 3578888888877 676665543
No 263
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.36 E-value=4.4e-06 Score=79.84 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=76.2
Q ss_pred CCCCEEEEEcCCC---chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC--------CC
Q 013515 240 KPGWKVLDACSAP---GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP--------KD 308 (441)
Q Consensus 240 ~~g~~VLDl~ag~---G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~--------~~ 308 (441)
.+..+|||+|||+ |..+..+.+. .+..+|+++|+|+.+++.+++++.. ..+++++.+|+.+... ..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhcc
Confidence 3457999999999 9876555554 4458999999999999999998853 3579999999976421 00
Q ss_pred CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 309 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
-.+.+||.|++. +++..-+|- ....+|..+.+.++ ||.|+.+..+.
T Consensus 153 ~d~~~~d~v~~~------~vlh~~~d~------------------------~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLV------GMLHYLSPD------------------------VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEET------TTGGGSCTT------------------------THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEe------chhhhCCcH------------------------HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 012478999752 222111110 01467888888666 78888776554
No 264
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.36 E-value=1.8e-06 Score=84.61 Aligned_cols=79 Identities=18% Similarity=0.217 Sum_probs=64.7
Q ss_pred HHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCC
Q 013515 233 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 233 ~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~ 311 (441)
+...++..+ .+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+ ++|+++.+|+.+ +. +
T Consensus 160 ~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~--~-- 231 (334)
T 2ip2_A 160 IPRLLDFRG-RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EV--P-- 231 (334)
T ss_dssp HHHHSCCTT-CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CC--C--
T ss_pred HHHhCCCCC-CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CC--C--
Confidence 334445555 8999999999999999998864 479999999 9999999999988776 579999999977 22 1
Q ss_pred CCccEEEE
Q 013515 312 SEVRAILL 319 (441)
Q Consensus 312 ~~fD~Il~ 319 (441)
..||+|++
T Consensus 232 ~~~D~v~~ 239 (334)
T 2ip2_A 232 SNGDIYLL 239 (334)
T ss_dssp SSCSEEEE
T ss_pred CCCCEEEE
Confidence 46999995
No 265
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.36 E-value=2.3e-06 Score=79.70 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.+..+|||+|||.|-.+..+. +..+++|+|+|+.+++.+++++..+|. +..+.+.|....++. ++||.|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~----~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPA----EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCC----CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCC----CCcchHHH
Confidence 457799999999999888765 568999999999999999999999984 688999999876654 57999975
No 266
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.33 E-value=3.3e-06 Score=82.71 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++++...|+ ++|++..+|+.. + .+ ..||+|
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~--~p--~~~D~v 239 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P--LP--AGAGGY 239 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C--CC--CSCSEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C--CC--CCCcEE
Confidence 34578999999999999999998864 478999999 9999999999999887 679999999973 2 11 269999
Q ss_pred EE
Q 013515 318 LL 319 (441)
Q Consensus 318 l~ 319 (441)
++
T Consensus 240 ~~ 241 (332)
T 3i53_A 240 VL 241 (332)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 267
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.32 E-value=7.9e-07 Score=83.64 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
+..+|||+|||.|-.++.++.. .+..+++|+|+++.+++.+++|+..+|+. ..+.+.|...-.+. +.+|+||+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~p~----~~~DvaL~ 204 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDRLD----EPADVTLL 204 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSCCC----SCCSEEEE
T ss_pred CCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccCCC----CCcchHHH
Confidence 3669999999999999988765 35689999999999999999999999986 78888898765544 67999985
No 268
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.32 E-value=2e-06 Score=78.38 Aligned_cols=79 Identities=18% Similarity=0.269 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeccCCCCC-----------
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA---ANIEVLHGDFLNLD----------- 305 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~---~~v~~~~~D~~~~~----------- 305 (441)
.+..+||++|+ |+.|+.+|++. .++|+++|.+++..+.+++++++.|+ ++|+++.+|+....
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 35779999997 68888888742 58999999999999999999999994 68999999976531
Q ss_pred ---C-------CCCCCCCccEEEEcCC
Q 013515 306 ---P-------KDPAYSEVRAILLDPS 322 (441)
Q Consensus 306 ---~-------~~~~~~~fD~Il~DpP 322 (441)
+ .....+.||.|++|+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 0 0111267999999985
No 269
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.30 E-value=4.8e-07 Score=90.43 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=72.3
Q ss_pred CCCEEEEEcCC------CchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC---CCC
Q 013515 241 PGWKVLDACSA------PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD---PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag------~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~---~~~ 311 (441)
++.+|||+||| +|+.++.++....+.++|+++|+++.+. ....+|+++++|+.+++... ...
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 56899999999 7888888887654568999999999872 13468999999998865320 001
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
++||+|++|.- -. . .-+...|..+++.|+ ||.++.+..
T Consensus 287 ~sFDlVisdgs----H~----------------------~-------~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 287 GPFDIVIDDGS----HI----------------------N-------AHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CCEEEEEECSC----CC----------------------H-------HHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CCccEEEECCc----cc----------------------c-------hhHHHHHHHHHHhcCCCeEEEEEec
Confidence 67999997631 10 0 123567888999888 688877644
No 270
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.29 E-value=3.2e-06 Score=81.04 Aligned_cols=111 Identities=16% Similarity=0.071 Sum_probs=70.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHH-----------------hCC-----------
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL-----------------SGA----------- 291 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~-----------------~g~----------- 291 (441)
.++.+|||+|||+|..+. ++... ...+|+++|+++.+++.++++++. .|.
T Consensus 70 ~~~~~vLDiGcG~G~~~~-l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQL-LSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGG-TTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHH-Hhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 368899999999999443 33322 236999999999999999886542 120
Q ss_pred --CcEEEEeccCCC-CCCCCC--CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q 013515 292 --ANIEVLHGDFLN-LDPKDP--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 366 (441)
Q Consensus 292 --~~v~~~~~D~~~-~~~~~~--~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~ 366 (441)
..+.++.+|+.+ .+.... ..++||+|++.- ++..-+ .. ..-...+|.
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~------~l~~~~---------------~~-------~~~~~~~l~ 199 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF------CLEAVS---------------PD-------LASFQRALD 199 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES------CHHHHC---------------SS-------HHHHHHHHH
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehh------hhhhhc---------------CC-------HHHHHHHHH
Confidence 025677889987 432211 124699999631 211000 00 112357788
Q ss_pred HHhCCCC-CcEEEEE
Q 013515 367 HALSFPG-VERVVYS 380 (441)
Q Consensus 367 ~a~~~~~-~G~lvYs 380 (441)
.+.++|+ ||.++.+
T Consensus 200 ~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 200 HITTLLRPGGHLLLI 214 (289)
T ss_dssp HHHTTEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEEE
Confidence 9999888 6877765
No 271
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.26 E-value=1.2e-06 Score=92.48 Aligned_cols=75 Identities=17% Similarity=0.112 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
.+-+|||+|||.|..+..||++ +..|+|+|+++.+++.++..+...|.-+|.+.++|+.++..... .++||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALE-EGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCC-TTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhcc-CCCccEEEE
Confidence 4679999999999999999986 36899999999999999999998886689999999988742211 167999984
No 272
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.26 E-value=1.2e-06 Score=79.95 Aligned_cols=117 Identities=12% Similarity=0.096 Sum_probs=78.4
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
++..+....++.+|||+|||+|..+..++ .+|+++|+++. ++.++.+|+.+++...
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~--- 113 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVPLED--- 113 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCSCCT---
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCCCCC---
Confidence 34444445678899999999999887662 68999999987 3467889998866443
Q ss_pred CCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcH
Q 013515 312 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENE 390 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe 390 (441)
++||.|++... + +.+| . ..+|..+.+.++ ||.++.+++... ..+.
T Consensus 114 ~~fD~v~~~~~------l-~~~~----------------~----------~~~l~~~~~~L~~gG~l~i~~~~~~-~~~~ 159 (215)
T 2zfu_A 114 ESVDVAVFCLS------L-MGTN----------------I----------RDFLEEANRVLKPGGLLKVAEVSSR-FEDV 159 (215)
T ss_dssp TCEEEEEEESC------C-CSSC----------------H----------HHHHHHHHHHEEEEEEEEEEECGGG-CSCH
T ss_pred CCEeEEEEehh------c-cccC----------------H----------HHHHHHHHHhCCCCeEEEEEEcCCC-CCCH
Confidence 67999997432 1 0111 1 356777777776 788887765432 2255
Q ss_pred HHHHHHhchhcCCCeEEec
Q 013515 391 DVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 391 ~vV~~~l~~~~~~~~~~~~ 409 (441)
+.+...++ ..+|+++.
T Consensus 160 ~~~~~~l~---~~Gf~~~~ 175 (215)
T 2zfu_A 160 RTFLRAVT---KLGFKIVS 175 (215)
T ss_dssp HHHHHHHH---HTTEEEEE
T ss_pred HHHHHHHH---HCCCEEEE
Confidence 66666664 35787654
No 273
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.25 E-value=2.1e-06 Score=81.35 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=85.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHh------cCC-----cEEEEEeCCH---HHHH-----------HHHHHHHH-----
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALM------KGK-----GKIVACELNK---ERVR-----------RLKDTIKL----- 288 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~------~~~-----~~V~a~D~~~---~rl~-----------~l~~~~~~----- 288 (441)
..++.+|||+|+|+|..++.+++.. .+. .+++++|.++ +.+. .++++++.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999999887764 342 5899999987 5544 45555554
Q ss_pred -------h--CCCcEEEEeccCCCCCCCCCC--CCCccEEEEcC--CCCCCcccccccCccCCCCCCCCCCCcccHHHHH
Q 013515 289 -------S--GAANIEVLHGDFLNLDPKDPA--YSEVRAILLDP--SCSGSGTAAERLDHLLPSHASGHTADPTEMERLN 355 (441)
Q Consensus 289 -------~--g~~~v~~~~~D~~~~~~~~~~--~~~fD~Il~Dp--PCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~ 355 (441)
+ |..+++++.+|+.+..+..+. ...||.|++|+ |+ ++|+. |+
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-------~~p~l-------------w~----- 192 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-------KNPDM-------------WT----- 192 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-------TCGGG-------------CC-----
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-------cChhh-------------cC-----
Confidence 1 224688999999875433211 12799999998 53 35543 22
Q ss_pred HHHHHHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEec
Q 013515 356 KLSAFQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 356 ~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
.+++....+.++ ||+++.-||+ ..|.+-|.. .+|++..
T Consensus 193 ------~~~l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~---aGF~v~~ 231 (257)
T 2qy6_A 193 ------QNLFNAMARLARPGGTLATFTSA-------GFVRRGLQE---AGFTMQK 231 (257)
T ss_dssp ------HHHHHHHHHHEEEEEEEEESCCB-------HHHHHHHHH---HTEEEEE
T ss_pred ------HHHHHHHHHHcCCCcEEEEEeCC-------HHHHHHHHH---CCCEEEe
Confidence 356777777777 6776632332 467777753 4888754
No 274
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.20 E-value=9.5e-06 Score=77.27 Aligned_cols=64 Identities=9% Similarity=0.076 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 013515 241 PGWKVLDACSAP--GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 304 (441)
Q Consensus 241 ~g~~VLDl~ag~--G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~ 304 (441)
....|||+|||+ ++.+..+++...+..+|+++|.|+.|++.+++++...+..++.++++|+.++
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 347999999997 6667777777666789999999999999999988755445799999999885
No 275
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.20 E-value=1.5e-06 Score=85.83 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=58.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+++|++|||+||+|||.|..+++. .++|+|+|+.+ +...+ ....+|+++.+|+..+.+.. .+||.|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-----l~~~l--~~~~~V~~~~~d~~~~~~~~---~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-----MAQSL--MDTGQVTWLREDGFKFRPTR---SNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-----CCHHH--HTTTCEEEECSCTTTCCCCS---SCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-----cChhh--ccCCCeEEEeCccccccCCC---CCcCEEE
Confidence 578999999999999999998876 47999999863 11112 22368999999998877653 6799999
Q ss_pred EcCCCCCC
Q 013515 319 LDPSCSGS 326 (441)
Q Consensus 319 ~DpPCSg~ 326 (441)
+|.-|.-.
T Consensus 276 sDm~~~p~ 283 (375)
T 4auk_A 276 CDMVEKPA 283 (375)
T ss_dssp ECCSSCHH
T ss_pred EcCCCChH
Confidence 99987433
No 276
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.15 E-value=7.5e-06 Score=78.28 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCCEEEEEcCCCch----HHHHHHHHhcC---CcEEEEEeCCHHHHHHHHHHHH--------------Hh---------C
Q 013515 241 PGWKVLDACSAPGN----KTVHLAALMKG---KGKIVACELNKERVRRLKDTIK--------------LS---------G 290 (441)
Q Consensus 241 ~g~~VLDl~ag~G~----kt~~la~~~~~---~~~V~a~D~~~~rl~~l~~~~~--------------~~---------g 290 (441)
++.+|||+|||+|- .+..+++.++. ..+|+|+|+|+.+++.+++++- ++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 55666666542 2589999999999999998741 10 1
Q ss_pred ---C-----CcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHH
Q 013515 291 ---A-----ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQK 362 (441)
Q Consensus 291 ---~-----~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~ 362 (441)
+ .+|.+.++|..+.+... .++||+|++ .. ++-. ..+ ..|.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~--~~~fDlI~c----rn--vliy-----------------f~~-------~~~~ 232 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNV--PGPFDAIFC----RN--VMIY-----------------FDK-------TTQE 232 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCC--CCCEEEEEE----CS--SGGG-----------------SCH-------HHHH
T ss_pred ceeechhhcccCeEEecccCCCCCCc--CCCeeEEEE----CC--chHh-----------------CCH-------HHHH
Confidence 1 36899999998743221 267999996 21 2110 111 2368
Q ss_pred HHHHHHhCCCC-CcEEEE
Q 013515 363 KALRHALSFPG-VERVVY 379 (441)
Q Consensus 363 ~lL~~a~~~~~-~G~lvY 379 (441)
+++....+.|+ ||.|+.
T Consensus 233 ~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 233 DILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp HHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEE
Confidence 89999998887 566654
No 277
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.12 E-value=2.9e-06 Score=79.17 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=37.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHH
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 285 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~ 285 (441)
.|.+|||+|||+|+.+..+++. +..+|+|+|+++.+++.++++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHT
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHh
Confidence 4779999999999999999886 335999999999999986654
No 278
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.11 E-value=5.9e-07 Score=83.74 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=53.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHH--hcC-CcEEEEEeC--CHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAAL--MKG-KGKIVACEL--NKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYS 312 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~--~~~-~~~V~a~D~--~~~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~ 312 (441)
++||++|+|+|||||+.+..++++ ++. .|.++|+|+ .+-.. ...|+.-+.+..+ |+.++.. .
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~~-----~ 138 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKPS-----E 138 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSCC-----C
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCCC-----C
Confidence 578999999999999999999887 433 467778773 22100 0024444566667 9987442 4
Q ss_pred CccEEEEcCCCCCCcc
Q 013515 313 EVRAILLDPSCSGSGT 328 (441)
Q Consensus 313 ~fD~Il~DpPCSg~G~ 328 (441)
++|+||+|.--+ +|.
T Consensus 139 ~~DvVLSDMAPn-SG~ 153 (269)
T 2px2_A 139 ISDTLLCDIGES-SPS 153 (269)
T ss_dssp CCSEEEECCCCC-CSC
T ss_pred CCCEEEeCCCCC-CCc
Confidence 699999998666 664
No 279
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.11 E-value=7.4e-07 Score=90.19 Aligned_cols=105 Identities=9% Similarity=0.018 Sum_probs=70.8
Q ss_pred HHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEE--EEeccCCCCCCCCCCCC
Q 013515 235 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE--VLHGDFLNLDPKDPAYS 312 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~--~~~~D~~~~~~~~~~~~ 312 (441)
..+.+.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ |+..+. +...+...++..+ +
T Consensus 101 ~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~---~ 170 (416)
T 4e2x_A 101 ATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTE---G 170 (416)
T ss_dssp HTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHH---C
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCC---C
Confidence 3455678999999999999999999875 35999999999999988765 554322 1122333332222 6
Q ss_pred CccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 313 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 313 ~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
+||+|++. +++-+-+| ...+|+.+.++++ ||.++.++
T Consensus 171 ~fD~I~~~------~vl~h~~d--------------------------~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 171 PANVIYAA------NTLCHIPY--------------------------VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp CEEEEEEE------SCGGGCTT--------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEEEC------ChHHhcCC--------------------------HHHHHHHHHHHcCCCeEEEEEe
Confidence 79999863 33322111 1467788888777 68877764
No 280
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.97 E-value=1.1e-05 Score=80.65 Aligned_cols=82 Identities=17% Similarity=0.215 Sum_probs=61.6
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-----CCCCccEE
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-----AYSEVRAI 317 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-----~~~~fD~I 317 (441)
.+|+|+|||.||.++-+... +-..|+|+|+++.+++..+.|. .+..++++|+.++....- ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 47999999999999988765 3356789999999999988875 345678899988753210 12579999
Q ss_pred EEcCCCCCCccccc
Q 013515 318 LLDPSCSGSGTAAE 331 (441)
Q Consensus 318 l~DpPCSg~G~~~~ 331 (441)
+.+|||.+.....+
T Consensus 76 ~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 76 IGGPPCQGFSSIGK 89 (376)
T ss_dssp EECCCCCTTC----
T ss_pred EecCCCCCcccccC
Confidence 99999998876543
No 281
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.94 E-value=1.6e-05 Score=78.37 Aligned_cols=112 Identities=16% Similarity=0.065 Sum_probs=75.1
Q ss_pred HHHHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCC
Q 013515 232 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 232 l~~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~ 310 (441)
.++..++..++.+|||+|||+|..+..+++..+ ..+++++|+ +..+. +++++..+. ++|+++.+|+....
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~----- 245 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV----- 245 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC-----
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC-----
Confidence 344556677889999999999999999998864 578999999 44444 333333444 46999999996211
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCC
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCS 383 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS 383 (441)
.+||+|++-- ++.. +... ...++|+++.+.++ ||+|+.....
T Consensus 246 -p~~D~v~~~~------vlh~-----------------~~d~-------~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 246 -PHADVHVLKR------ILHN-----------------WGDE-------DSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp -CCCSEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred -CCCcEEEEeh------hccC-----------------CCHH-------HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 1689998521 2211 1111 12478889888877 6877665543
No 282
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.94 E-value=2.1e-05 Score=77.81 Aligned_cols=79 Identities=19% Similarity=0.176 Sum_probs=62.3
Q ss_pred HHHhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCC
Q 013515 234 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 313 (441)
Q Consensus 234 ~~~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~ 313 (441)
+..++..+..+|+|+|||+|..+..+++..+ ..+++..|. +..++.++++++..+.++|+++.+|+...+. ..
T Consensus 172 ~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~-----~~ 244 (353)
T 4a6d_A 172 LTAFDLSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL-----PE 244 (353)
T ss_dssp HHSSCGGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-----CC
T ss_pred HHhcCcccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-----CC
Confidence 3344556788999999999999999999864 468888887 8899999998877677899999999976432 34
Q ss_pred ccEEEE
Q 013515 314 VRAILL 319 (441)
Q Consensus 314 fD~Il~ 319 (441)
+|+|++
T Consensus 245 ~D~~~~ 250 (353)
T 4a6d_A 245 ADLYIL 250 (353)
T ss_dssp CSEEEE
T ss_pred ceEEEe
Confidence 688885
No 283
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.88 E-value=2.4e-05 Score=76.65 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=63.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 321 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~Dp 321 (441)
+-+|+|+|||.||.++.+... +-..|+++|+++.+++..+.|.... .++|+.++.... ...+|+|+.+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~-------~~~Di~~~~~~~--~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEK-------PEGDITQVNEKT--IPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCC-------CBSCGGGSCGGG--SCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCC-------CcCCHHHcCHhh--CCCCCEEEECC
Confidence 568999999999999888764 3467899999999999999987421 168888876543 24689999999
Q ss_pred CCCCCccccc
Q 013515 322 SCSGSGTAAE 331 (441)
Q Consensus 322 PCSg~G~~~~ 331 (441)
||.+.....+
T Consensus 80 PCQ~fS~ag~ 89 (327)
T 2c7p_A 80 PCQAFSISGK 89 (327)
T ss_dssp CCTTTCTTSC
T ss_pred CCCCcchhcc
Confidence 9999877644
No 284
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.88 E-value=5.6e-06 Score=81.80 Aligned_cols=83 Identities=16% Similarity=0.166 Sum_probs=56.8
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCC
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpP 322 (441)
.+|+|++||.||.++.+...-.....|+++|+++.+++..+.|.. +..++++|+.++....-....+|+|+.+||
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 479999999999999887751112479999999999999998864 234678999887532100016899999999
Q ss_pred CCCCcccc
Q 013515 323 CSGSGTAA 330 (441)
Q Consensus 323 CSg~G~~~ 330 (441)
|.+..+..
T Consensus 78 Cq~fS~ag 85 (343)
T 1g55_A 78 CQPFTRIG 85 (343)
T ss_dssp --------
T ss_pred CcchhhcC
Confidence 99887754
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.86 E-value=6.9e-06 Score=77.77 Aligned_cols=82 Identities=22% Similarity=0.138 Sum_probs=51.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~I 317 (441)
++++.+|||+|||||+.+..++... +...|+++|+.......... .+..|.+.+.+... |+..+. ..++|+|
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~l~-----~~~~DvV 160 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFNME-----VIPGDTL 160 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGGSC-----CCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhhcC-----CCCcCEE
Confidence 4678899999999999999888654 44688999997542111100 01123222333322 433322 1679999
Q ss_pred EEcCCCCCCcc
Q 013515 318 LLDPSCSGSGT 328 (441)
Q Consensus 318 l~DpPCSg~G~ 328 (441)
|+|.--+ +|.
T Consensus 161 LSDmApn-sG~ 170 (282)
T 3gcz_A 161 LCDIGES-SPS 170 (282)
T ss_dssp EECCCCC-CSC
T ss_pred EecCccC-CCC
Confidence 9997766 774
No 286
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.84 E-value=1.3e-05 Score=75.75 Aligned_cols=83 Identities=17% Similarity=0.078 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
.+++.+|||+|||||+.+..++... +...++++|+.......... ....|. ++..+..++...... ..+||.|+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~~l~---~~~~DlVl 145 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIHRLE---PVKCDTLL 145 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTTTSC---CCCCSEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceehhcC---CCCccEEE
Confidence 4678899999999999999887653 34678888887432100000 011122 444455554332222 25799999
Q ss_pred EcCCCCCCcc
Q 013515 319 LDPSCSGSGT 328 (441)
Q Consensus 319 ~DpPCSg~G~ 328 (441)
+|.--+ +|.
T Consensus 146 sD~apn-sG~ 154 (277)
T 3evf_A 146 CDIGES-SSS 154 (277)
T ss_dssp ECCCCC-CSC
T ss_pred ecCccC-cCc
Confidence 998655 664
No 287
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.82 E-value=3.2e-05 Score=74.03 Aligned_cols=122 Identities=8% Similarity=0.090 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc----CCcEEEEEeCCH--------------------------HHHHHHHHHHHHhC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK----GKGKIVACELNK--------------------------ERVRRLKDTIKLSG 290 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~----~~~~V~a~D~~~--------------------------~rl~~l~~~~~~~g 290 (441)
....||++|++.|+.++.|+..+. +.++|+++|..+ .+++.+++++++.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 355999999999999999998774 357999999641 15788999999999
Q ss_pred C--CcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 013515 291 A--ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 368 (441)
Q Consensus 291 ~--~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a 368 (441)
+ ++|+++.||+.+..+..+ .++||.|++|.-- + +-....|+..
T Consensus 186 l~~~~I~li~Gda~etL~~~~-~~~~d~vfIDaD~---y-------------------------------~~~~~~Le~~ 230 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAP-IDTLAVLRMDGDL---Y-------------------------------ESTWDTLTNL 230 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCC-CCCEEEEEECCCS---H-------------------------------HHHHHHHHHH
T ss_pred CCcCceEEEEeCHHHHHhhCC-CCCEEEEEEcCCc---c-------------------------------ccHHHHHHHH
Confidence 8 789999999987655432 2579999999641 0 0113567778
Q ss_pred hCCCC-CcEEEEEcCCCCChhcHHHHHHHhc
Q 013515 369 LSFPG-VERVVYSTCSIHQVENEDVIKSVLP 398 (441)
Q Consensus 369 ~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~ 398 (441)
+.+++ ||.||.=-....+.+ ..-|.+|++
T Consensus 231 ~p~L~pGGiIv~DD~~~~~G~-~~Av~Ef~~ 260 (282)
T 2wk1_A 231 YPKVSVGGYVIVDDYMMCPPC-KDAVDEYRA 260 (282)
T ss_dssp GGGEEEEEEEEESSCTTCHHH-HHHHHHHHH
T ss_pred HhhcCCCEEEEEcCCCCCHHH-HHHHHHHHH
Confidence 88776 666666444323433 455666664
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.75 E-value=3.1e-05 Score=73.78 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccEEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~Il 318 (441)
.+|.+|||+|||||+++-.+++.+ +...|+++|+.......... ....+.+.+.+..+ |+..+. ...+|.|+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~l~-----~~~~DlVl 152 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFTMP-----TEPSDTLL 152 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTTSC-----CCCCSEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccccccccc-ccccCCceEEeecCceeeecC-----CCCcCEEe
Confidence 579999999999999999998764 34678999997431100000 00112222333322 333322 15799999
Q ss_pred EcCCCCCCcc
Q 013515 319 LDPSCSGSGT 328 (441)
Q Consensus 319 ~DpPCSg~G~ 328 (441)
+|.-.+ +|.
T Consensus 153 sD~APn-sG~ 161 (300)
T 3eld_A 153 CDIGES-SSN 161 (300)
T ss_dssp ECCCCC-CSS
T ss_pred ecCcCC-CCC
Confidence 999888 884
No 289
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.75 E-value=0.00048 Score=66.10 Aligned_cols=84 Identities=13% Similarity=0.086 Sum_probs=67.6
Q ss_pred HhCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHh--C---CCcEEEEeccCCCCCCCCCC
Q 013515 236 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G---AANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~--g---~~~v~~~~~D~~~~~~~~~~ 310 (441)
++.+. ..+||=+|.|.|+.+..+.+.- +..+|+.+|+++..++.+++.+... | -++++++.+|+..+.....
T Consensus 79 ~~~p~-pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~- 155 (294)
T 3o4f_A 79 LAHGH-AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS- 155 (294)
T ss_dssp HHSSC-CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSS-
T ss_pred hhCCC-CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhcc-
Confidence 34443 5699999999999998887753 3469999999999999999988653 2 2579999999998875543
Q ss_pred CCCccEEEEcCCC
Q 013515 311 YSEVRAILLDPSC 323 (441)
Q Consensus 311 ~~~fD~Il~DpPC 323 (441)
++||+|++|.+-
T Consensus 156 -~~yDvIi~D~~d 167 (294)
T 3o4f_A 156 -QTFDVIISDCTD 167 (294)
T ss_dssp -CCEEEEEESCCC
T ss_pred -ccCCEEEEeCCC
Confidence 789999999984
No 290
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.70 E-value=4.4e-05 Score=75.98 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+|+++.+|+.+ +. ..||+|+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~v~ 272 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SV-----PQGDAMI 272 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CC-----CCEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CC-----CCCCEEE
Confidence 5668899999999999999999886 4478999999 888887654 2579999999976 32 2289998
Q ss_pred E
Q 013515 319 L 319 (441)
Q Consensus 319 ~ 319 (441)
+
T Consensus 273 ~ 273 (372)
T 1fp1_D 273 L 273 (372)
T ss_dssp E
T ss_pred E
Confidence 6
No 291
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.68 E-value=3.1e-06 Score=80.53 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC-CCCCCCCccEEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP-KDPAYSEVRAILL 319 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~-~~~~~~~fD~Il~ 319 (441)
.+..+||+++|+|..++.+.+ +..+++.+|.++..++.+++|++. .+++++++.|+..... ..+...+||.||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 366799999999999987655 347999999999999999999975 3579999999754321 1111256999999
Q ss_pred cCCC
Q 013515 320 DPSC 323 (441)
Q Consensus 320 DpPC 323 (441)
|||.
T Consensus 166 DPPY 169 (283)
T 2oo3_A 166 DPSY 169 (283)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9996
No 292
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.65 E-value=6.8e-05 Score=74.57 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .+|+++.+|+.+ +.. .. |+|+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~-~~p----~~-D~v~ 266 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFD-GVP----KG-DAIF 266 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTT-CCC----CC-SEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCC-CCC----CC-CEEE
Confidence 4567899999999999999999886 4478999999 8888766532 579999999986 222 22 8887
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
+-- ++.. |..++ ..++|+++.+.++ ||+|+.....+
T Consensus 267 ~~~------vlh~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 267 IKW------ICHD-----------------WSDEH-------CLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EES------CGGG-----------------BCHHH-------HHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred Eec------hhhc-----------------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 622 1210 11221 1467888888776 68777665544
No 293
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.64 E-value=0.00012 Score=72.62 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=71.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+|+++.+|+.+ +.. .. |+|+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~p----~~-D~v~ 264 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EVP----SG-DTIL 264 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCC----CC-SEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CCC----CC-CEEE
Confidence 56788999999999999999998864 478999999 888776653 2579999999987 322 12 8887
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCC
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSI 384 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~ 384 (441)
+-- ++.. |..++ -.++|+++.+.++ ||+|+.....+
T Consensus 265 ~~~------vlh~-----------------~~d~~-------~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 265 MKW------ILHD-----------------WSDQH-------CATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp EES------CGGG-----------------SCHHH-------HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ehH------Hhcc-----------------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 521 1210 11222 1467888888766 67776655443
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.64 E-value=3.9e-05 Score=70.53 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~I 317 (441)
+++|+.|+|+|||||+.+-.++... +..+|+|+|+...-.+. -..++.+|-..|++..+ |+..+.+ .++|.|
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~-----~~~Dtl 148 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP-----EKCDTL 148 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC-----CCCSEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC-----ccccEE
Confidence 5789999999999999999888775 34689999997532210 00123466678999999 9866654 458999
Q ss_pred EEcCCC
Q 013515 318 LLDPSC 323 (441)
Q Consensus 318 l~DpPC 323 (441)
|+|--=
T Consensus 149 lcDIge 154 (267)
T 3p8z_A 149 LCDIGE 154 (267)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 999654
No 295
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.57 E-value=0.00021 Score=75.70 Aligned_cols=120 Identities=14% Similarity=0.104 Sum_probs=83.1
Q ss_pred CCEEEEEcCCCchH---HHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 242 GWKVLDACSAPGNK---TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 242 g~~VLDl~ag~G~k---t~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
+..|||+|||+|-. ++..++..+...+|+|+|.++ +...+++..+.+|. +.|+++++|.+++... +++|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP----EKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP----EKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS----SCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC----cccCEE
Confidence 45799999999988 555555543334899999997 56677788888888 5699999999998754 689999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC--ChhcHHHHH
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH--QVENEDVIK 394 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~--~~ENe~vV~ 394 (441)
+...= |.+.+ + +.. .+.|.++-++|+ +|.++=+.|+++ |-+.+..-.
T Consensus 433 VSEwM--G~fLl--~-----------------------E~m---levL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~ 482 (637)
T 4gqb_A 433 VSELL--GSFAD--N-----------------------ELS---PECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYN 482 (637)
T ss_dssp ECCCC--BTTBG--G-----------------------GCH---HHHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHH
T ss_pred EEEcC--ccccc--c-----------------------cCC---HHHHHHHHHhcCCCcEEccccceEEEEEecCHHHHH
Confidence 97654 22211 0 000 256777778888 677776666665 455555444
Q ss_pred HH
Q 013515 395 SV 396 (441)
Q Consensus 395 ~~ 396 (441)
+.
T Consensus 483 e~ 484 (637)
T 4gqb_A 483 EV 484 (637)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 296
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.51 E-value=7.8e-05 Score=79.09 Aligned_cols=125 Identities=11% Similarity=0.100 Sum_probs=83.6
Q ss_pred CCEEEEEcCCCchHHHHH---HHHhc---------CCcEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCC-
Q 013515 242 GWKVLDACSAPGNKTVHL---AALMK---------GKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPK- 307 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~l---a~~~~---------~~~~V~a~D~~~~rl~~l~~~~~~~g~~-~v~~~~~D~~~~~~~- 307 (441)
+..|||+|||+|-.+... ++..+ ...+|+|+|.++.....++.... +|.. .|+++.+|.+++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 458999999999996433 22222 23599999999988877776665 6774 599999999988641
Q ss_pred -CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCCC
Q 013515 308 -DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYSTCSIH 385 (441)
Q Consensus 308 -~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYsTCS~~ 385 (441)
....+++|+|+...- |.+-.+ +++.+.|..+-++|+ +|.++=+.|+++
T Consensus 489 ~~~~~ekVDIIVSElm----Gsfl~n--------------------------EL~pe~Ld~v~r~Lkp~Gi~iP~~~t~y 538 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL----GSFGDN--------------------------ELSPECLDGVTGFLKPTTISIPQKYTSY 538 (745)
T ss_dssp HHTTCCCCSEEEECCC----BTTBGG--------------------------GSHHHHHHTTGGGSCTTCEEESCEEEEE
T ss_pred ccCCCCcccEEEEecc----ccccch--------------------------hccHHHHHHHHHhCCCCcEEECCccEEE
Confidence 000268999998776 322110 123467777777887 687776666655
Q ss_pred --ChhcHHHHHHHh
Q 013515 386 --QVENEDVIKSVL 397 (441)
Q Consensus 386 --~~ENe~vV~~~l 397 (441)
|-+.+..-.++.
T Consensus 539 laPi~~~~l~~~v~ 552 (745)
T 3ua3_A 539 VKPIMSTHIHQTIK 552 (745)
T ss_dssp EEEEECHHHHHHHH
T ss_pred EEEecCHHHHHHHH
Confidence 556665555443
No 297
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.40 E-value=5.3e-05 Score=66.67 Aligned_cols=59 Identities=20% Similarity=0.080 Sum_probs=47.1
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC---CCCCCCC
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP---KDPAYSE 313 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~---~~~~~~~ 313 (441)
++..+|++|||++||. +++|+++.|++.++++... ++.+.++|+.+++. .+ ++
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~---~~ 63 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKE---SS 63 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCS---SC
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCC---CC
Confidence 4578899999999985 2389999999999887532 47889999988764 32 68
Q ss_pred ccEEEE
Q 013515 314 VRAILL 319 (441)
Q Consensus 314 fD~Il~ 319 (441)
||.|++
T Consensus 64 fD~V~~ 69 (176)
T 2ld4_A 64 FDIILS 69 (176)
T ss_dssp EEEEEE
T ss_pred EeEEEE
Confidence 999995
No 298
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.32 E-value=0.00023 Score=68.66 Aligned_cols=85 Identities=12% Similarity=0.133 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCCccEE
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGK-IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSEVRAI 317 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~-V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~I 317 (441)
..+-+|+|+|||.||.+.-+... +-... |+++|+++.+++..+.|.. ...+..+|+.++...+ +....+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHHccHHHhcccCCcCEE
Confidence 34668999999999999887664 21122 6999999999998887742 3357789998876432 112468999
Q ss_pred EEcCCCCCCcccc
Q 013515 318 LLDPSCSGSGTAA 330 (441)
Q Consensus 318 l~DpPCSg~G~~~ 330 (441)
+..|||.+.....
T Consensus 88 ~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 88 IGGSPCNDLSIVN 100 (295)
T ss_dssp EECCCCGGGBTTC
T ss_pred EecCCCccccccC
Confidence 9999999877653
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.32 E-value=0.00013 Score=71.34 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=58.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCcEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKGKI-VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~~V-~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
.-+|+|++||.||.+.-+...--+...| .|+|+++.+++..+.|... . ++++|+.++....-....+|+|+..
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---~---~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---E---VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---C---CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---C---cccCChhhcCHHHhccCCCCEEEec
Confidence 3489999999999998876641112356 7999999999999988632 1 5678988876432101268999999
Q ss_pred CCCCCC
Q 013515 321 PSCSGS 326 (441)
Q Consensus 321 pPCSg~ 326 (441)
|||.+.
T Consensus 84 pPCQ~f 89 (327)
T 3qv2_A 84 PPCQPY 89 (327)
T ss_dssp CCCTTC
T ss_pred CCccCc
Confidence 999998
No 300
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.32 E-value=0.00014 Score=71.45 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=61.3
Q ss_pred EEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCCC
Q 013515 244 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 323 (441)
Q Consensus 244 ~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPC 323 (441)
+|+|+|||.||.+.-+...--+...|.|+|+++.+.+..+.|.. ...++++|+.++....-....+|+|+..|||
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCCC
Confidence 79999999999998887651111357899999999999888863 2336688988876432111268999999999
Q ss_pred CCCccccc
Q 013515 324 SGSGTAAE 331 (441)
Q Consensus 324 Sg~G~~~~ 331 (441)
.+.....+
T Consensus 80 Q~fS~ag~ 87 (333)
T 4h0n_A 80 QPFTRNGK 87 (333)
T ss_dssp CCSEETTE
T ss_pred cchhhhhh
Confidence 98866543
No 301
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.29 E-value=0.00023 Score=69.45 Aligned_cols=79 Identities=14% Similarity=0.270 Sum_probs=62.8
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCC
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpP 322 (441)
.+|+|++||.||.++-+-+. +-..|.|+|+++.+++..+.|. + . .++.+|+.++.... ...+|+|+.-||
T Consensus 1 mkvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~---~--~-~~~~~DI~~i~~~~--~~~~D~l~ggpP 70 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH---S--A-KLIKGDISKISSDE--FPKCDGIIGGPP 70 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC---C--S-EEEESCGGGCCGGG--SCCCSEEECCCC
T ss_pred CeEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC---C--C-CcccCChhhCCHhh--CCcccEEEecCC
Confidence 37999999999999877654 3346789999999999988874 2 2 46789999887543 367899999999
Q ss_pred CCCCccccc
Q 013515 323 CSGSGTAAE 331 (441)
Q Consensus 323 CSg~G~~~~ 331 (441)
|.+..+..+
T Consensus 71 CQ~fS~ag~ 79 (331)
T 3ubt_Y 71 SQSWSEGGS 79 (331)
T ss_dssp GGGTEETTE
T ss_pred CCCcCCCCC
Confidence 999876644
No 302
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.27 E-value=0.00035 Score=68.75 Aligned_cols=67 Identities=18% Similarity=0.240 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+|+++.+|+.+ +. ..||+|+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----p~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SI-----PNADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CC-----CCCSEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CC-----CCccEEE
Confidence 35678999999999999999998764 468999999 999887764 2469999999975 21 2389998
Q ss_pred E
Q 013515 319 L 319 (441)
Q Consensus 319 ~ 319 (441)
+
T Consensus 252 ~ 252 (352)
T 1fp2_A 252 L 252 (352)
T ss_dssp E
T ss_pred e
Confidence 6
No 303
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.26 E-value=0.00077 Score=64.89 Aligned_cols=48 Identities=19% Similarity=0.146 Sum_probs=42.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 290 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g 290 (441)
.+|+.|||.|||+|..+..++.+ ..+++++|+++.+++.++++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 68999999999999988876654 2589999999999999999998763
No 304
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.25 E-value=0.00017 Score=61.64 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCCc-hHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE-
Q 013515 240 KPGWKVLDACSAPG-NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI- 317 (441)
Q Consensus 240 ~~g~~VLDl~ag~G-~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I- 317 (441)
.++++|||+|||+| ..+..|++.. ...|+|+|+++..+. +++.|+.+.... .+..||.|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~---------------~v~dDiF~P~~~--~Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG---------------IVRDDITSPRME--IYRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT---------------EECCCSSSCCHH--HHTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc---------------eEEccCCCCccc--ccCCcCEEE
Confidence 45789999999999 5888888742 357999999987666 788898874432 12579999
Q ss_pred EEcCC
Q 013515 318 LLDPS 322 (441)
Q Consensus 318 l~DpP 322 (441)
.+.||
T Consensus 95 sirPP 99 (153)
T 2k4m_A 95 SIRPP 99 (153)
T ss_dssp EESCC
T ss_pred EcCCC
Confidence 89999
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.22 E-value=0.0024 Score=60.60 Aligned_cols=81 Identities=15% Similarity=0.106 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~I 317 (441)
+++++.|||+||||||.+-.++... +...|+|+|+...-.+. -..++.+|-..|.+..+ |+..+.+ .++|.|
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~~-----~~~D~i 164 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRPS-----ECCDTL 164 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSCC-----CCCSEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCCC-----CCCCEE
Confidence 5688899999999999999887764 34689999997541100 00012344445888887 8877765 458999
Q ss_pred EEcCCCCCCc
Q 013515 318 LLDPSCSGSG 327 (441)
Q Consensus 318 l~DpPCSg~G 327 (441)
++|.- -.+|
T Consensus 165 vcDig-eSs~ 173 (321)
T 3lkz_A 165 LCDIG-ESSS 173 (321)
T ss_dssp EECCC-CCCS
T ss_pred EEECc-cCCC
Confidence 99998 4444
No 306
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.13 E-value=0.00073 Score=64.07 Aligned_cols=71 Identities=20% Similarity=0.182 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcC------CCchHHHHHHHHhcCC-cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 013515 239 PKPGWKVLDACS------APGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 311 (441)
Q Consensus 239 ~~~g~~VLDl~a------g~G~kt~~la~~~~~~-~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 311 (441)
+.-|++|||+|| +||+ ..+.+. .+. +.|+++|+.+--. ..+ .++.+|...+...
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~~~---- 167 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVHTA---- 167 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEEES----
T ss_pred ecCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCccccc-----------CCC-eEEEccccccccC----
Confidence 446999999997 9998 334444 555 5999999986210 123 3589997664432
Q ss_pred CCccEEEEcCCCCCCcc
Q 013515 312 SEVRAILLDPSCSGSGT 328 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G~ 328 (441)
.+||+||.|.-..-+|.
T Consensus 168 ~k~DLVISDMAPNtTG~ 184 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKH 184 (344)
T ss_dssp SCEEEEEECCCCTTSCS
T ss_pred CCCCEEEecCCCCcCCc
Confidence 67999999988888887
No 307
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.12 E-value=0.0011 Score=66.74 Aligned_cols=66 Identities=14% Similarity=0.101 Sum_probs=54.9
Q ss_pred hCCCCCCEEEEEcCCCchHHHHHH-HHhcCCcEEEEEeCCHHHHHHHHHHHHH---hCC-CcEEEEeccCC
Q 013515 237 LAPKPGWKVLDACSAPGNKTVHLA-ALMKGKGKIVACELNKERVRRLKDTIKL---SGA-ANIEVLHGDFL 302 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~G~kt~~la-~~~~~~~~V~a~D~~~~rl~~l~~~~~~---~g~-~~v~~~~~D~~ 302 (441)
+.+.+|+.|+|+||+.|..|..++ ...++.++|+|+|.++...+.+++|++. .+. ++|++++.-+.
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 356789999999999999999988 4544458999999999999999999998 356 78888765443
No 308
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.08 E-value=0.0007 Score=67.10 Aligned_cols=133 Identities=14% Similarity=0.110 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhC---C-----CcEEEEeccCCCCCCCC-CC
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG---A-----ANIEVLHGDFLNLDPKD-PA 310 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g---~-----~~v~~~~~D~~~~~~~~-~~ 310 (441)
.+..+||=+|.|-|+....+.+. . ..+|+.+|+++..++.+++.+.... . ++++++.+|+..+.... ..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35689999999999998888765 3 4799999999999999998764321 1 34889999997665210 01
Q ss_pred CCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEE-EcCCCCChh
Q 013515 311 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVY-STCSIHQVE 388 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvY-sTCS~~~~E 388 (441)
..+||+|++|.+-...+.. |. .. ......++.++.+.+.|+ +|.+|. +.|-..+ +
T Consensus 282 ~~~yDvIIvDl~D~~~s~~---p~------------------g~-a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~ 338 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTS---PE------------------ED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-E 338 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC--------------------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-H
T ss_pred cCceeEEEECCCCCcccCc---cc------------------Cc-chHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-h
Confidence 2579999999763221110 00 00 012345677788877777 687765 3444333 3
Q ss_pred cHHHHHHHh
Q 013515 389 NEDVIKSVL 397 (441)
Q Consensus 389 Ne~vV~~~l 397 (441)
.-..+.+.|
T Consensus 339 ~~~~i~~tl 347 (381)
T 3c6k_A 339 ALSLYEEQL 347 (381)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 323344444
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.06 E-value=0.0016 Score=64.27 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=62.9
Q ss_pred cCcccccchh-hHHHHHHhCCCC------CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 013515 220 NGCVFLQGKA-SSMVAAALAPKP------GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 292 (441)
Q Consensus 220 ~g~~~~Qd~s-s~l~~~~l~~~~------g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~ 292 (441)
-|+-.+.|.. ..-++..+++.+ ++.|||+|.|+|..|..|++... ..+|+|+|+++..+..+++.+ . .+
T Consensus 30 lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~--~~ 105 (353)
T 1i4w_A 30 YGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E--GS 105 (353)
T ss_dssp GGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T--TS
T ss_pred CCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c--CC
Confidence 3443444443 455666777663 69999999999999999998643 368999999999999998876 2 36
Q ss_pred cEEEEeccCCCCC
Q 013515 293 NIEVLHGDFLNLD 305 (441)
Q Consensus 293 ~v~~~~~D~~~~~ 305 (441)
+++++++|+.++.
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 8999999997664
No 310
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.89 E-value=0.0012 Score=65.04 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=53.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+|+++.+|+.+ +. ..||+|+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~v~ 256 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SI-----PSADAVL 256 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CC-----CCCSEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CC-----CCceEEE
Confidence 34678999999999999999998864 478999999 788876653 3569999999976 31 2489998
Q ss_pred E
Q 013515 319 L 319 (441)
Q Consensus 319 ~ 319 (441)
+
T Consensus 257 ~ 257 (358)
T 1zg3_A 257 L 257 (358)
T ss_dssp E
T ss_pred E
Confidence 6
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.67 E-value=0.0012 Score=67.90 Aligned_cols=85 Identities=16% Similarity=0.231 Sum_probs=59.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------------
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD------------- 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~------------- 308 (441)
.-+|+|+|||.||.+.-+... +-..|+|+|+++.+++..+.|.... ....++++|+.++....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhhhhccccccchhhHHhhh
Confidence 458999999999999887653 2235899999999999888875211 22345678887765321
Q ss_pred -CCCCCccEEEEcCCCCCCcccc
Q 013515 309 -PAYSEVRAILLDPSCSGSGTAA 330 (441)
Q Consensus 309 -~~~~~fD~Il~DpPCSg~G~~~ 330 (441)
.....+|+|+..|||.+..+..
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC----
T ss_pred hhcCCCCCEEEecCCCcchhhhC
Confidence 0124689999999999887654
No 312
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.65 E-value=0.0022 Score=60.42 Aligned_cols=49 Identities=20% Similarity=0.327 Sum_probs=40.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 291 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~ 291 (441)
.+|+.|||.+||+|..+.....+ ..+++++|+++..++.++++++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 68999999999999877665544 26899999999999999999987654
No 313
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.00 E-value=0.0097 Score=59.67 Aligned_cols=88 Identities=10% Similarity=0.006 Sum_probs=60.5
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCcE----EEEEeCCHHHHHHHHHHHHHhCCC--------------------------
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKGK----IVACELNKERVRRLKDTIKLSGAA-------------------------- 292 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~~----V~a~D~~~~rl~~l~~~~~~~g~~-------------------------- 292 (441)
-+|+|+|||.||.+..+-+.-.+-.. |.++|+++.+++..+.|....+.-
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 48999999999999888765211123 889999999999998887532100
Q ss_pred -----cEE----------EEeccCCCCCCCCCCCCCccEEEEcCCCCCCccccc
Q 013515 293 -----NIE----------VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 331 (441)
Q Consensus 293 -----~v~----------~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~ 331 (441)
.+. ...+|+.++....- .+.+|+|+.-|||.+.....+
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~i-p~~vDll~ggpPCQ~fS~ag~ 143 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNF-PKNIDIFTYSFPCQDLSVQGL 143 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTS-CSSCSEEEECCCCTTTCTTSC
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhC-CCCCcEEEEeCCCCCHHHhCC
Confidence 000 03478877765431 135799999999988776543
No 314
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.68 E-value=0.023 Score=63.05 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=56.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC------------CCC-C
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL------------DPK-D 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~------------~~~-~ 308 (441)
.-+++|++||.||.++-+... +-...|.|+|+++.+.+..+.|.. +..++.+|+..+ ... .
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP-----GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT-----TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC-----CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 347999999999999888664 111357899999999998887742 334555554321 111 1
Q ss_pred CCCCCccEEEEcCCCCCCccc
Q 013515 309 PAYSEVRAILLDPSCSGSGTA 329 (441)
Q Consensus 309 ~~~~~fD~Il~DpPCSg~G~~ 329 (441)
+..+.+|+|+.-|||.+....
T Consensus 614 p~~~~vDll~GGpPCQ~FS~a 634 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGM 634 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSS
T ss_pred ccCCCeeEEEEcCCCcchhhh
Confidence 112468999999999987654
No 315
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.59 E-value=0.044 Score=52.65 Aligned_cols=129 Identities=16% Similarity=0.094 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCCchHHHHHH---HHhcCCcE--EEEEeCCH--------HHHHHHHH-HHHHhC---CCc--EEEEeccC
Q 013515 241 PGWKVLDACSAPGNKTVHLA---ALMKGKGK--IVACELNK--------ERVRRLKD-TIKLSG---AAN--IEVLHGDF 301 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la---~~~~~~~~--V~a~D~~~--------~rl~~l~~-~~~~~g---~~~--v~~~~~D~ 301 (441)
+.-+|||+|-|+|.-++... ...++..+ .+++|.++ .-+..+.+ ...... -.+ +.+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 34579999999998654332 22344444 46777531 11222222 222221 122 45678898
Q ss_pred CCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEEE
Q 013515 302 LNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVYS 380 (441)
Q Consensus 302 ~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvYs 380 (441)
.+..+... ...||+|++|+=. -+++||. |+ .+++....++++ ||+++--
T Consensus 176 ~~~l~~l~-~~~~Da~flDgFs-----P~kNPeL-------------Ws-----------~e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 176 RKRIKEVE-NFKADAVFHDAFS-----PYKNPEL-------------WT-----------LDFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp HHHGGGCC-SCCEEEEEECCSC-----TTTSGGG-------------GS-----------HHHHHHHHTTEEEEEEEEES
T ss_pred HHHHhhhc-ccceeEEEeCCCC-----cccCccc-------------CC-----------HHHHHHHHHHhCCCcEEEEE
Confidence 76544322 1469999999721 1357775 33 367888888777 6777655
Q ss_pred cCCCCChhcHHHHHHHhchhcCCCeEEec
Q 013515 381 TCSIHQVENEDVIKSVLPIAMSFGFQLAT 409 (441)
Q Consensus 381 TCS~~~~ENe~vV~~~l~~~~~~~~~~~~ 409 (441)
||+ ..|.+-|. ..||++..
T Consensus 226 taa-------g~VRR~L~---~aGF~V~k 244 (308)
T 3vyw_A 226 SSS-------LSVRKSLL---TLGFKVGS 244 (308)
T ss_dssp CCC-------HHHHHHHH---HTTCEEEE
T ss_pred eCc-------HHHHHHHH---HCCCEEEe
Confidence 566 89999885 35888755
No 316
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.51 E-value=0.037 Score=60.33 Aligned_cols=46 Identities=20% Similarity=0.036 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC----CcEEEEEeCCHHHHHHHHHHH
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG----KGKIVACELNKERVRRLKDTI 286 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~----~~~V~a~D~~~~rl~~l~~~~ 286 (441)
..-+|+|++||.||.++-+.+.... -..+.|+|+++.+++..+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3457999999999999888664210 025789999999999998874
No 317
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.17 E-value=0.73 Score=43.81 Aligned_cols=121 Identities=18% Similarity=0.141 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eccCCCCCCCCCCCCCccEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~-~~D~~~~~~~~~~~~~fD~Il 318 (441)
.+.+|| +..|+|+.+.+++..+. ...+|++++.+....+.+.+.+....-.+++++ .+|..+...-..-+..+|.|+
T Consensus 10 ~~~~vl-VTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVL-VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEE-EECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 467888 55668999999887653 335899999998877766555543222467887 789876543322234689999
Q ss_pred EcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcC
Q 013515 319 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 382 (441)
Q Consensus 319 ~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTC 382 (441)
..+..+..+ . + ..+.+.........+++.+.+....+.+||.+.
T Consensus 89 h~A~~~~~~---~---------------~--~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 89 HIASVVSFS---N---------------K--YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp ECCCCCSCC---S---------------C--HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EeCCCCCCC---C---------------C--HHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 877643321 0 0 122333445556778887765334467777543
No 318
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=94.76 E-value=0.058 Score=61.56 Aligned_cols=82 Identities=18% Similarity=0.195 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCC-cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC------------CCC-
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL------------DPK- 307 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~-~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~------------~~~- 307 (441)
.-+|+|++||.||.++-+... +- ..|.|+|+++.+++..+.|. .+..++.+|+..+ ...
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 457999999999999987653 21 25889999999999988874 2334555554321 111
Q ss_pred CCCCCCccEEEEcCCCCCCcccc
Q 013515 308 DPAYSEVRAILLDPSCSGSGTAA 330 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~G~~~ 330 (441)
.+..+.+|+|+.-|||-+.....
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~ag 946 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSGMN 946 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCSSS
T ss_pred ccccCccceEEecCCCccccccc
Confidence 11124689999999998876543
No 319
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.36 E-value=0.086 Score=51.05 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=37.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCH---HHHHHHHHHHHHhC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK---ERVRRLKDTIKLSG 290 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~---~rl~~l~~~~~~~g 290 (441)
..+|+.|||-+||+|..+.....+ + .+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~-~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE-G--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH-T--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc-C--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 368999999999999866555444 3 5899999999 99999999988765
No 320
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.05 E-value=0.069 Score=51.74 Aligned_cols=63 Identities=14% Similarity=0.067 Sum_probs=47.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 305 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~ 305 (441)
..+|+.|||-+||+|..+.. |..++ .+.+++|+++..++.+++++++.+.. ...++.|+.++.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~a-a~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~i~ 312 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLV-AERES--RKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNRIL 312 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHH-HHHTT--CEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHH-HHHcC--CCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHHHH
Confidence 36899999999999985544 44443 58999999999999999998877653 334455555544
No 321
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.00 E-value=0.38 Score=46.69 Aligned_cols=69 Identities=19% Similarity=0.097 Sum_probs=47.9
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 314 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 314 (441)
..++++|++||-.|+|+ |..+.+++..++ .+|+++|.++++++.++ .+|.+.+. .|...+. ..+
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v~---~~~~~~~------~~~ 235 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKHFY---TDPKQCK------EEL 235 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSEEE---SSGGGCC------SCE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCeec---CCHHHHh------cCC
Confidence 34788999999998765 555666777653 48999999999988764 47876543 3332221 268
Q ss_pred cEEEE
Q 013515 315 RAILL 319 (441)
Q Consensus 315 D~Il~ 319 (441)
|+|+-
T Consensus 236 D~vid 240 (348)
T 3two_A 236 DFIIS 240 (348)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 88864
No 322
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.45 E-value=0.18 Score=54.04 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=76.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc---------C--CcEEEEEeCCHHHHHHHHH--------------HHHHh-----C
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK---------G--KGKIVACELNKERVRRLKD--------------TIKLS-----G 290 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~---------~--~~~V~a~D~~~~rl~~l~~--------------~~~~~-----g 290 (441)
+.-+|+|+|-|+|.-.+.+.+... . .-+++++|..|-..+.+++ .++.. |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 446899999999999888766531 1 1478999995433333332 12221 2
Q ss_pred C-----C----cEEEEeccCCCCCCCCC--CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHH
Q 013515 291 A-----A----NIEVLHGDFLNLDPKDP--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA 359 (441)
Q Consensus 291 ~-----~----~v~~~~~D~~~~~~~~~--~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~ 359 (441)
+ + .+++..+|+.+..+... ....||.|++|+... .++||. |+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p-----~~np~~-------------w~~-------- 191 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP-----AKNPDM-------------WNE-------- 191 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC-------CCTT-------------CSH--------
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCC-----CCChhh-------------hhH--------
Confidence 1 1 46677889876554321 015799999999643 246664 223
Q ss_pred HHHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEe
Q 013515 360 FQKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 408 (441)
Q Consensus 360 ~Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~ 408 (441)
+++....++.+ |+++..-||. ..|.+.|.. .+|.+.
T Consensus 192 ---~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~---aGf~~~ 228 (689)
T 3pvc_A 192 ---QLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQ---AGFNVT 228 (689)
T ss_dssp ---HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHH---TTCEEE
T ss_pred ---HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHh---CCeEEE
Confidence 34444445555 5666655565 567777743 466554
No 323
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=91.09 E-value=0.25 Score=46.89 Aligned_cols=82 Identities=10% Similarity=0.106 Sum_probs=58.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~~ 313 (441)
|.+|| +..|+|+.+..+++.+. ...+|+.+|.+++.++.+.+.++..|..++.++.+|+.+...- ...++.
T Consensus 41 ~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 41 ARSVL-VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 55666 66677888888887653 3458999999999888888877766655788899999874311 011356
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+--.
T Consensus 120 iD~lvnnAg~~ 130 (293)
T 3rih_A 120 LDVVCANAGIF 130 (293)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 324
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.83 E-value=0.74 Score=42.60 Aligned_cols=85 Identities=7% Similarity=0.021 Sum_probs=61.3
Q ss_pred CCCEEEEEcCCCc-hHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPG-NKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G-~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~ 311 (441)
.|.++|=.|++.+ |.+..++..+. ...+|+.+|.+++.++.+.+.++..+-.++.++..|..+...- ...+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4778888887653 67777766542 3468999999999999998888887766677888898764311 1124
Q ss_pred CCccEEEEcCCCCC
Q 013515 312 SEVRAILLDPSCSG 325 (441)
Q Consensus 312 ~~fD~Il~DpPCSg 325 (441)
+..|.++.++...+
T Consensus 85 G~iD~lvnnAg~~~ 98 (256)
T 4fs3_A 85 GNIDGVYHSIAFAN 98 (256)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEecccccc
Confidence 67899998876544
No 325
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.31 E-value=0.8 Score=42.35 Aligned_cols=81 Identities=7% Similarity=0.148 Sum_probs=59.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.++..+-.++.++..|..+...-. ..++.
T Consensus 10 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 10 GRSVV-VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 56666 56667888888887653 33589999999999998888888776557888999988644210 11247
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+--
T Consensus 89 id~lvnnAg~ 98 (262)
T 3pk0_A 89 IDVVCANAGV 98 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987654
No 326
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=90.30 E-value=0.83 Score=42.73 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.+...|..++.++.+|..+...-. ..++.
T Consensus 28 ~k~vl-ITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 28 GKKVI-VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 66777 55677888888887653 34689999999999988888777777557888899987643110 01246
Q ss_pred ccEEEEc
Q 013515 314 VRAILLD 320 (441)
Q Consensus 314 fD~Il~D 320 (441)
+|.++..
T Consensus 107 iD~li~n 113 (286)
T 1xu9_A 107 LDMLILN 113 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8999987
No 327
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=89.51 E-value=0.69 Score=44.72 Aligned_cols=119 Identities=11% Similarity=0.118 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCC---cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGK---GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~---~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
.+.+|| +..|+|+.+.++++.+... .+|++++.++.....+.+.+. -.++.++.+|+.+...-...+..+|.|
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~~~D~V 95 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALEGVDIC 95 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence 366788 5667899999998766432 389999999888776655442 246889999998643211112468999
Q ss_pred EEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEc
Q 013515 318 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYST 381 (441)
Q Consensus 318 l~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsT 381 (441)
+..+.-+....... + ..+.+.........+++.|.+. ..+.+||.+
T Consensus 96 ih~Aa~~~~~~~~~---------------~--~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~S 141 (344)
T 2gn4_A 96 IHAAALKHVPIAEY---------------N--PLECIKTNIMGASNVINACLKN-AISQVIALS 141 (344)
T ss_dssp EECCCCCCHHHHHH---------------S--HHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred EECCCCCCCCchhc---------------C--HHHHHHHHHHHHHHHHHHHHhC-CCCEEEEec
Confidence 98665322110000 0 1223333444556677777653 346777754
No 328
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=89.35 E-value=1.1 Score=40.86 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+.. ..+|+++|.++..++.+.+.++..+. ++.++.+|..+...-. ..++.
T Consensus 11 ~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 11 GKCAI-ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEE-EECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 56676 566789999999886643 35899999999988888777776663 5778888987643110 01236
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.|+..+..
T Consensus 89 ~d~vi~~Ag~ 98 (255)
T 1fmc_A 89 VDILVNNAGG 98 (255)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999986653
No 329
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.32 E-value=0.85 Score=41.84 Aligned_cols=80 Identities=10% Similarity=0.079 Sum_probs=57.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc--CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~--~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
+.+|| +..|+|+.+.+++..+. ...+|+.++.+...++.+.+.++..|. ++.++.+|+.+...-. ..++
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 55666 66678999999987663 346899999999888888777777663 5778888987643110 0123
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.|+..+-.
T Consensus 82 ~id~li~~Ag~ 92 (276)
T 1wma_A 82 GLDVLVNNAGI 92 (276)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999987654
No 330
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=88.99 E-value=0.45 Score=46.59 Aligned_cols=49 Identities=18% Similarity=0.169 Sum_probs=34.9
Q ss_pred CCCEEEEEc-CC-CchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 013515 241 PGWKVLDAC-SA-PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 294 (441)
Q Consensus 241 ~g~~VLDl~-ag-~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v 294 (441)
+|++||=.| +| .|..+.++++.++ ..+|+++|.++++++.++ .+|.+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~v 221 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHHV 221 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCEE
Confidence 799999776 33 3555666666543 369999999999988774 4787643
No 331
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=88.75 E-value=0.74 Score=45.53 Aligned_cols=52 Identities=27% Similarity=0.333 Sum_probs=40.8
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCC
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 291 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~ 291 (441)
...++++|++||-.|||+ |..+.+++..++ ..+|+++|.++++++.++ .+|.
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC
Confidence 345788999999999876 667777887753 358999999999988764 4676
No 332
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=88.47 E-value=2.1 Score=39.30 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+...|. ++.++..|+.+...-. ..++
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAV-VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 466777 55567888988887653 346899999999999999888887764 6888889987644210 1124
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+..
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987654
No 333
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=88.45 E-value=6 Score=39.02 Aligned_cols=81 Identities=21% Similarity=0.165 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCC-cEEEEEeCCHH---HHHHHHHHHHHhC--------CCcEEEEeccCCCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKE---RVRRLKDTIKLSG--------AANIEVLHGDFLNLDPKD 308 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~-~~V~a~D~~~~---rl~~l~~~~~~~g--------~~~v~~~~~D~~~~~~~~ 308 (441)
++.+|| +..|+|+.+.+++..+... .+|++++.++. .++.+.+.++... ..++.++.+|..+...-.
T Consensus 68 ~~~~vl-VTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTL-LTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEE-EECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEE-EecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 355677 5567899999998876443 58999998866 5566655554431 146889999998744322
Q ss_pred CCCCCccEEEEcCCC
Q 013515 309 PAYSEVRAILLDPSC 323 (441)
Q Consensus 309 ~~~~~fD~Il~DpPC 323 (441)
....+|.|+..+..
T Consensus 147 -~~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 147 -LPENMDTIIHAGAR 160 (427)
T ss_dssp -CSSCCSEEEECCCC
T ss_pred -CcCCCCEEEECCcc
Confidence 34678999986543
No 334
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=88.29 E-value=0.76 Score=42.37 Aligned_cols=81 Identities=11% Similarity=0.077 Sum_probs=56.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKG-KGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.++++.+.. ..+|++++. ++..++.+.+.++..|. ++.++.+|..+...-. ..++
T Consensus 21 ~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 21 GKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56777 666789999998886633 358999998 88888877777777664 5778889987643110 0123
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.|+..+...
T Consensus 99 ~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 99 GLDFVMSNSGME 110 (274)
T ss_dssp CEEEEECCCCCC
T ss_pred CCCEEEECCCCC
Confidence 689998766543
No 335
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.00 E-value=3.2 Score=37.16 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=49.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcE-EEEeccCCCCCCCCCCCCCccEEEE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v-~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
|.+|| +..|+|+.+.++++.+. ...+|++++.++..++.+.. . ++ .++.+|.. ..-...+..+|.|+.
T Consensus 21 ~~~il-VtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~--~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 21 GMRVL-VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLE--EDFSHAFASIDAVVF 90 (236)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTT--SCCGGGGTTCSEEEE
T ss_pred CCeEE-EECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccH--HHHHHHHcCCCEEEE
Confidence 67888 55678999999887663 33689999999887765433 2 46 78889987 211122457899998
Q ss_pred cCC
Q 013515 320 DPS 322 (441)
Q Consensus 320 DpP 322 (441)
.+.
T Consensus 91 ~ag 93 (236)
T 3e8x_A 91 AAG 93 (236)
T ss_dssp CCC
T ss_pred CCC
Confidence 665
No 336
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.99 E-value=2.6 Score=38.16 Aligned_cols=81 Identities=9% Similarity=0.131 Sum_probs=58.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.++..++.+.+.++..|. ++.++..|..+...- ...++.
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 55666 55677888888877653 346899999999999999888888774 578888998764311 012356
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+.-+
T Consensus 83 id~li~~Ag~~ 93 (247)
T 3lyl_A 83 IDILVNNAGIT 93 (247)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 337
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.83 E-value=0.35 Score=45.98 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=42.3
Q ss_pred CcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 013515 292 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 371 (441)
Q Consensus 292 ~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~ 371 (441)
..++++++|..+.....+ .++||.|+.|||..........++ ......+..........++..+.++
T Consensus 20 ~~~~i~~gD~~~~l~~l~-~~s~DlIvtdPPY~~~~~y~~~~~------------~~~~~~~~~~~l~~l~~~~~~~~rv 86 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFP-EASVHLVVTSPPYWTLKRYEDTPG------------QLGHIEDYEAFLDELDRVWREVFRL 86 (297)
T ss_dssp -CEEEEESCHHHHHTTSC-TTCEEEEEECCCCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECcHHHHHhhCC-CCceeEEEECCCCCCccccCCChh------------hhcccccHHHHHHHHHHHHHHHHHH
Confidence 457899999987433221 268999999999854322111110 0001222333444456778888888
Q ss_pred CC-CcEEEEE
Q 013515 372 PG-VERVVYS 380 (441)
Q Consensus 372 ~~-~G~lvYs 380 (441)
|+ +|.++..
T Consensus 87 Lk~~G~l~i~ 96 (297)
T 2zig_A 87 LVPGGRLVIV 96 (297)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCcEEEEE
Confidence 87 5665544
No 338
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=87.50 E-value=2.6 Score=38.26 Aligned_cols=81 Identities=10% Similarity=0.141 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+||=. .|+|+.+.++++.+. ...+|+.+|.+++.++.+.+.++..+. .+.++..|..+...-. ..++
T Consensus 8 ~~k~vlIT-Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVT-GSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEE-CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 36677744 467888888887663 346899999999999998888887663 6788889988754110 0124
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+.-
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987754
No 339
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=87.48 E-value=2.6 Score=41.61 Aligned_cols=120 Identities=9% Similarity=0.108 Sum_probs=75.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCc--EEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeccCCCCCCCC--CCCCCc
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKG--KIVACELNKERVRRLKDTIKLSGA---ANIEVLHGDFLNLDPKD--PAYSEV 314 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~--~V~a~D~~~~rl~~l~~~~~~~g~---~~v~~~~~D~~~~~~~~--~~~~~f 314 (441)
+.+|| +..|+|+.+.++++.+...| .|+++|.++..+..+...+..... .++.++.+|..+..... .....+
T Consensus 35 ~k~vL-VTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFL-VLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEE-EEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 66788 55568999999988775544 899999999988877776665421 46889999988743110 001468
Q ss_pred cEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccH----HHHHHHHHHHHHHHHHHhCCCCCcEEEEEcC
Q 013515 315 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM----ERLNKLSAFQKKALRHALSFPGVERVVYSTC 382 (441)
Q Consensus 315 D~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~----~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTC 382 (441)
|.|+.-+..+... .. .++ +.+.........+++.|.+. ..+.+||.+-
T Consensus 114 D~Vih~Aa~~~~~-~~------------------~~~~~~~~~~~~Nv~gt~~l~~aa~~~-gv~r~V~iSS 165 (399)
T 3nzo_A 114 DYVLNLSALKHVR-SE------------------KDPFTLMRMIDVNVFNTDKTIQQSIDA-GAKKYFCVST 165 (399)
T ss_dssp SEEEECCCCCCGG-GG------------------SSHHHHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred CEEEECCCcCCCc-cc------------------cCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeC
Confidence 9998855543221 10 122 23334444556677777553 3367777543
No 340
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=87.48 E-value=4.1 Score=38.15 Aligned_cols=81 Identities=16% Similarity=0.130 Sum_probs=57.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCc----EEEEEeCCHHHHHHHHHHHHHhC-CCcEEEEeccCCCCCCC-------CC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKG----KIVACELNKERVRRLKDTIKLSG-AANIEVLHGDFLNLDPK-------DP 309 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~----~V~a~D~~~~rl~~l~~~~~~~g-~~~v~~~~~D~~~~~~~-------~~ 309 (441)
|.+||=.| |+||.+..++..+...| .|+.++.+.+.++.+.+.+...+ -.++.++..|+.+...- ..
T Consensus 33 ~k~~lVTG-as~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITG-ASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEec-CCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 66777555 56788888887653222 89999999999998888887653 24688889998875421 12
Q ss_pred CCCCccEEEEcCCC
Q 013515 310 AYSEVRAILLDPSC 323 (441)
Q Consensus 310 ~~~~fD~Il~DpPC 323 (441)
.++.+|.++.++-.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 24578999987653
No 341
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=87.43 E-value=2.2 Score=39.24 Aligned_cols=85 Identities=8% Similarity=0.033 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCCc-hHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPG-NKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G-~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||=.|++.| |.+..++..+. ...+|+.++.+....+.+.+..+..+-.++.++..|+.+...-. ..+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3667886776543 47777766552 34689999998877777777766666556888999998754211 112
Q ss_pred CCccEEEEcCCCCC
Q 013515 312 SEVRAILLDPSCSG 325 (441)
Q Consensus 312 ~~fD~Il~DpPCSg 325 (441)
+.+|.++..+....
T Consensus 86 g~id~li~~Ag~~~ 99 (266)
T 3oig_A 86 GVIHGIAHCIAFAN 99 (266)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCeeEEEEcccccc
Confidence 46899998776543
No 342
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.32 E-value=2.3 Score=39.42 Aligned_cols=81 Identities=12% Similarity=0.151 Sum_probs=57.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+||.+..++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|+.+...-. ..++.
T Consensus 4 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVIL-ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45666 55567888888887653 346899999999999999888887764 6778888887643110 11246
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+.-.
T Consensus 82 iD~lVnnAG~~ 92 (264)
T 3tfo_A 82 IDVLVNNAGVM 92 (264)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 343
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.27 E-value=2.2 Score=39.68 Aligned_cols=80 Identities=11% Similarity=0.091 Sum_probs=59.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~~ 313 (441)
|..+| +..|++|.+..++..+. ...+|+.+|.+++.++.+.+.++..|. ++..+..|..+...- ...++.
T Consensus 9 gKval-VTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 9 GKTAL-VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 66666 55566778888877663 346999999999999999988888875 577888888764311 123578
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
.|.++.++--
T Consensus 87 iDiLVNNAG~ 96 (255)
T 4g81_D 87 VDILINNAGI 96 (255)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999988753
No 344
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.19 E-value=2.3 Score=39.38 Aligned_cols=81 Identities=20% Similarity=0.127 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
+.+|| +..|+|+.+.+++..+. ...+|+++|.++..++.+.+.++..|. ++.++.+|+.+...-. ..++.
T Consensus 31 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 31 GEIVL-ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 56777 45567888988887653 346899999999988888887777664 6888889987643110 01246
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.|+..+...
T Consensus 109 iD~li~~Ag~~ 119 (272)
T 1yb1_A 109 VSILVNNAGVV 119 (272)
T ss_dssp CSEEEECCCCC
T ss_pred CcEEEECCCcC
Confidence 89999877543
No 345
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=87.02 E-value=2.1 Score=38.46 Aligned_cols=80 Identities=9% Similarity=0.113 Sum_probs=55.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHH-HhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIK-LSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~-~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
+.+|| +..|+|+.+.++++.+. ...+|+.++.+.+.++.+.+.+. ..| .++.++..|..+...-. ..++
T Consensus 2 ~k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAV-ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 44566 44567888888887663 34689999999999988877775 445 46888889987644110 1124
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+.-
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999987754
No 346
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.86 E-value=1.3 Score=41.95 Aligned_cols=83 Identities=10% Similarity=0.111 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+||=.| |+|+.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|+.+...-. ..++
T Consensus 30 ~gk~vlVTG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTG-GASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 477788554 55788888877653 346899999999999999888887764 5788889988754210 0124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+.-..
T Consensus 108 ~id~lvnnAg~~~ 120 (301)
T 3tjr_A 108 GVDVVFSNAGIVV 120 (301)
T ss_dssp SCSEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 6899999776443
No 347
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=86.76 E-value=2.2 Score=39.58 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=56.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.++..|. ..+.++.+|+.+...-. ..++
T Consensus 32 ~k~vl-VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLAL-VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56777 45567888888887653 346899999999999888888877765 45778888987643110 0123
Q ss_pred CccEEEEcCC
Q 013515 313 EVRAILLDPS 322 (441)
Q Consensus 313 ~fD~Il~DpP 322 (441)
.+|.|+..+.
T Consensus 111 ~iD~vi~~Ag 120 (279)
T 1xg5_A 111 GVDICINNAG 120 (279)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899988654
No 348
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.36 E-value=2.2 Score=39.18 Aligned_cols=83 Identities=16% Similarity=0.220 Sum_probs=57.8
Q ss_pred CCEEEEEcCCCc-hHHHHHHHHh-cCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPG-NKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G-~kt~~la~~~-~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+||=.|+ +| |.+.+++..+ ....+|+.+|.+.+.++.+.+.++..+-.++.++..|+.+...-. ..++
T Consensus 22 ~k~vlITGa-sg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 22 GKVVLVTAA-AGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TCEEEESSC-SSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECC-CCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 667775554 44 5677776654 334689999999999998888887766567899999998644210 1124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+--+.
T Consensus 101 ~id~li~~Ag~~~ 113 (266)
T 3o38_A 101 RLDVLVNNAGLGG 113 (266)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCCcCC
Confidence 6899999776443
No 349
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=86.34 E-value=3.5 Score=37.33 Aligned_cols=76 Identities=13% Similarity=0.156 Sum_probs=50.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC------CCCCCCCCcc
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD------PKDPAYSEVR 315 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~------~~~~~~~~fD 315 (441)
|.+|| +..|+|+.+.+++..+...+.|++++.++..++.+.+ ..++.++..|..+.. .....++.+|
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id 77 (245)
T 3e9n_A 5 KKIAV-VTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD 77 (245)
T ss_dssp -CEEE-EESTTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred CCEEE-EEcCCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence 55666 4556788899998887667899999999888776543 235777777765431 1112235789
Q ss_pred EEEEcCCCC
Q 013515 316 AILLDPSCS 324 (441)
Q Consensus 316 ~Il~DpPCS 324 (441)
.++..+...
T Consensus 78 ~lv~~Ag~~ 86 (245)
T 3e9n_A 78 TLVHAAAVA 86 (245)
T ss_dssp EEEECC---
T ss_pred EEEECCCcC
Confidence 999877543
No 350
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=86.29 E-value=2.1 Score=39.51 Aligned_cols=82 Identities=12% Similarity=0.194 Sum_probs=58.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+.. .| .++.++..|+.+...-. ..++
T Consensus 20 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 20 GKRAL-ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 56666 56667888888887663 346899999999999888777766 45 36888999998754211 1124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+--..
T Consensus 98 ~id~lv~nAg~~~ 110 (266)
T 4egf_A 98 GLDVLVNNAGISH 110 (266)
T ss_dssp SCSEEEEECCCCC
T ss_pred CCCEEEECCCcCC
Confidence 7899998876443
No 351
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=86.26 E-value=3.9 Score=38.40 Aligned_cols=81 Identities=11% Similarity=0.063 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCCc-hHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPG-NKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G-~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||=.|++.| |.+..++..+. ...+|+.++.++...+.+.+..+..+ ++.++..|+.+...-. ..+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 4778887787654 57777766553 34689999999776676766666665 5778889987643210 123
Q ss_pred CCccEEEEcCCC
Q 013515 312 SEVRAILLDPSC 323 (441)
Q Consensus 312 ~~fD~Il~DpPC 323 (441)
+.+|.++..+--
T Consensus 108 g~iD~lVnnAG~ 119 (293)
T 3grk_A 108 GKLDFLVHAIGF 119 (293)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 578999987654
No 352
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=86.20 E-value=3.7 Score=37.01 Aligned_cols=83 Identities=14% Similarity=0.181 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC---------CC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD---------PA 310 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~---------~~ 310 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.++.++..++.+.+.++..+..++.++..|........ ..
T Consensus 13 ~~k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVIL-VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 366677 56667888888887663 34689999999999999999888887666677777763221110 01
Q ss_pred CCCccEEEEcCCCC
Q 013515 311 YSEVRAILLDPSCS 324 (441)
Q Consensus 311 ~~~fD~Il~DpPCS 324 (441)
++.+|.++..+...
T Consensus 92 ~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 92 FGRLDGLLHNASII 105 (247)
T ss_dssp HSCCSEEEECCCCC
T ss_pred CCCCCEEEECCccC
Confidence 24689999877643
No 353
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=85.99 E-value=1.5 Score=43.12 Aligned_cols=52 Identities=25% Similarity=0.328 Sum_probs=39.6
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 292 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~ 292 (441)
.+++++|++||-.|+|+ |..+.++|+.++ ..+|+++|.++++++.++ .+|.+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc
Confidence 35688999999998765 556677777653 348999999999998774 46863
No 354
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=85.84 E-value=6.5 Score=38.77 Aligned_cols=75 Identities=16% Similarity=0.042 Sum_probs=45.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHh----------------cCCcEEEEEeCC-----------HHHHHHHHHHHHHhCC-Cc
Q 013515 242 GWKVLDACSAPGNKTVHLAALM----------------KGKGKIVACELN-----------KERVRRLKDTIKLSGA-AN 293 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~----------------~~~~~V~a~D~~-----------~~rl~~l~~~~~~~g~-~~ 293 (441)
..+|+|+||++|.-|+.+...+ .+...|+.+|+- +...+.++ +..|- .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 4789999999999999887661 134678899986 33222221 22332 12
Q ss_pred EEEEeccCCCCCCCCCCCCCccEEEE
Q 013515 294 IEVLHGDFLNLDPKDPAYSEVRAILL 319 (441)
Q Consensus 294 v~~~~~D~~~~~~~~~~~~~fD~Il~ 319 (441)
-.++.+....+-...-..++||.|+.
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~S 155 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHS 155 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEE
T ss_pred ceEEEecchhhhhccCCCCceEEEEe
Confidence 24566665554322111278999975
No 355
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=85.75 E-value=2.4 Score=39.44 Aligned_cols=82 Identities=12% Similarity=0.072 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEeccCCCCCCCC-------CC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAA--NIEVLHGDFLNLDPKD-------PA 310 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~--~v~~~~~D~~~~~~~~-------~~ 310 (441)
.|.+||=. .|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.++..|.. ++.++.+|..+...-. ..
T Consensus 10 ~~k~vlVT-Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVT-GGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 36677744 457888888877653 3468999999999999888888877642 6888889987644110 11
Q ss_pred CCCccEEEEcCCC
Q 013515 311 YSEVRAILLDPSC 323 (441)
Q Consensus 311 ~~~fD~Il~DpPC 323 (441)
++.+|.++..+--
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2468999987753
No 356
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=85.63 E-value=1.7 Score=42.12 Aligned_cols=54 Identities=30% Similarity=0.357 Sum_probs=40.5
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
...++++|++||-.|+|+ |..+.+++..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCCE
Confidence 345788999999999765 55566677665 3348999999999988764 468764
No 357
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=85.62 E-value=1.9 Score=41.44 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=41.4
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
....+++|++||-.|||+ |..+.+++..++ .+|+++|.++++++.++ ++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 213 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGAEV 213 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCCCE
Confidence 345678999999999876 777777887753 49999999999988764 478754
No 358
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=85.61 E-value=2.1 Score=39.70 Aligned_cols=82 Identities=6% Similarity=0.048 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+|| +..|+||.+..++..+. ...+|+.++.++..++.+.+.++..|. ++.++..|+.+...-. ..++
T Consensus 27 ~~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAI-VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 355666 66677888888887653 346899999999999998888888775 4667788887643110 1124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+.-.
T Consensus 105 ~iD~lvnnAg~~ 116 (270)
T 3ftp_A 105 ALNVLVNNAGIT 116 (270)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999877543
No 359
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=85.35 E-value=3.5 Score=37.97 Aligned_cols=82 Identities=12% Similarity=0.087 Sum_probs=57.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCC---CCCCCCccE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPK---DPAYSEVRA 316 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~---~~~~~~fD~ 316 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.+...+. ..+.++..|..+...- ...++.+|.
T Consensus 10 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 10 GKTAL-VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 56667 55567888888887653 346899999999999888887777643 4577788888763310 012357899
Q ss_pred EEEcCCCC
Q 013515 317 ILLDPSCS 324 (441)
Q Consensus 317 Il~DpPCS 324 (441)
++..+.-+
T Consensus 89 lv~nAg~~ 96 (267)
T 3t4x_A 89 LINNLGIF 96 (267)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99877543
No 360
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=85.20 E-value=2.2 Score=39.16 Aligned_cols=80 Identities=11% Similarity=0.160 Sum_probs=54.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~-g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+... |. ++.++.+|..+...-. ..++
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAV-ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56677 45567888888887653 3358999999998888777666554 53 5778888987643110 0124
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+.-
T Consensus 85 ~id~lv~~Ag~ 95 (263)
T 3ai3_A 85 GADILVNNAGT 95 (263)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987754
No 361
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=85.13 E-value=2.5 Score=39.84 Aligned_cols=81 Identities=14% Similarity=0.262 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEeccCCCCCCCC-------CCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAA--NIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~--~v~~~~~D~~~~~~~~-------~~~ 311 (441)
|.+|| +..|+|+.+..++..+. ...+|+.++.+++.++.+.+.+...|.. ++.++..|+.+...-. ..+
T Consensus 26 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 26 GKSVI-ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 56666 56678888988887663 3468999999999988887777766532 6888889987643110 012
Q ss_pred CCccEEEEcCCC
Q 013515 312 SEVRAILLDPSC 323 (441)
Q Consensus 312 ~~fD~Il~DpPC 323 (441)
+.+|.++..+..
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987754
No 362
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=85.01 E-value=2.9 Score=38.06 Aligned_cols=79 Identities=8% Similarity=0.192 Sum_probs=55.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.++..+. ++.++.+|..+...-. ..++.
T Consensus 13 ~k~vl-ItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 13 NRVAI-VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 66777 45567889998887653 346899999999888877777776663 5888889987643110 01236
Q ss_pred ccEEEEcCC
Q 013515 314 VRAILLDPS 322 (441)
Q Consensus 314 fD~Il~DpP 322 (441)
+|.|+..+.
T Consensus 91 id~vi~~Ag 99 (260)
T 3awd_A 91 VDILVACAG 99 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998664
No 363
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=84.77 E-value=1.9 Score=39.58 Aligned_cols=81 Identities=10% Similarity=0.190 Sum_probs=58.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.+|.+.+.++.+.+.++..|. ++.++..|..+...-. ..++.
T Consensus 12 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 12 DAVAI-VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TCEEE-ECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56666 55667888888877653 236899999999999998888888774 6788889987644210 11247
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+--.
T Consensus 90 id~lv~nAg~~ 100 (256)
T 3gaf_A 90 ITVLVNNAGGG 100 (256)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 364
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=84.74 E-value=1.8 Score=40.17 Aligned_cols=81 Identities=12% Similarity=0.100 Sum_probs=58.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.++..|. ++.++..|..+...-. ..++.
T Consensus 26 gk~~l-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 26 GRTAL-VTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 66677 56677888888887663 346899999999999988888887774 5788888887643210 11347
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+-.+
T Consensus 104 iD~lv~nAg~~ 114 (271)
T 4ibo_A 104 VDILVNNAGIQ 114 (271)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 365
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=84.70 E-value=1.8 Score=42.25 Aligned_cols=53 Identities=21% Similarity=0.241 Sum_probs=40.3
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||-.|+|+ |..+.++++.++ ..+|+++|.++++++.++ .+|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 238 (371)
T 1f8f_A 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATH 238 (371)
T ss_dssp TTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCE
Confidence 35678999999999876 566777777653 347999999999988764 467653
No 366
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=84.46 E-value=1.8 Score=39.56 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=54.8
Q ss_pred CEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCCc
Q 013515 243 WKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSEV 314 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~f 314 (441)
.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|..+...-. ..++.+
T Consensus 3 k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVAL-VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4556 44567888888887653 335899999999988888777776663 5778888987643110 113478
Q ss_pred cEEEEcCCC
Q 013515 315 RAILLDPSC 323 (441)
Q Consensus 315 D~Il~DpPC 323 (441)
|.++..+..
T Consensus 81 d~lv~nAg~ 89 (256)
T 1geg_A 81 DVIVNNAGV 89 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987754
No 367
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.31 E-value=5.2 Score=36.82 Aligned_cols=122 Identities=14% Similarity=0.134 Sum_probs=73.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+||.+.+++..+. ...+|+.++. +.+.++.+.+.++..|. ++.++..|..+...-. ..++
T Consensus 18 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 18 GKVAL-VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TCEEE-ESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 66677 55567888888887663 3357887776 56778888888887774 5778889988644210 1124
Q ss_pred CccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHH----HHHHHHHHHHHHhCCC-CCcEEEEEcC
Q 013515 313 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK----LSAFQKKALRHALSFP-GVERVVYSTC 382 (441)
Q Consensus 313 ~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~----l~~~Q~~lL~~a~~~~-~~G~lvYsTC 382 (441)
.+|.++.++.-...+.+. | .+.++... ...-...+++.++..+ ++|.+|+.+.
T Consensus 96 ~id~lvnnAg~~~~~~~~---~--------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLK---D--------------VTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp CCCEEECCCCCCCCCCGG---G--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCEEEECCCCCCCCCcc---c--------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 689998876543322211 0 12333332 2234445566666644 4677777654
No 368
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=84.20 E-value=2.9 Score=38.11 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=56.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|++++. ++..++.+.+.++..+ .++.++.+|..+...-. ..++
T Consensus 7 ~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 7 GKVVV-ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 55676 56677889988887653 3468999999 8888887777777665 36778888987643110 0123
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.|+..+...
T Consensus 85 ~id~li~~Ag~~ 96 (261)
T 1gee_A 85 KLDVMINNAGLE 96 (261)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 369
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=83.73 E-value=3.4 Score=37.75 Aligned_cols=79 Identities=9% Similarity=0.053 Sum_probs=55.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC-C
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY-S 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~-~ 312 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.++..|. ++.++..|..+...-. ..+ +
T Consensus 14 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 14 AKTVL-VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 55677 66678889999887653 346899999999888887777776664 5778888887643110 001 4
Q ss_pred CccEEEEcCC
Q 013515 313 EVRAILLDPS 322 (441)
Q Consensus 313 ~fD~Il~DpP 322 (441)
.+|.|+..+.
T Consensus 92 ~id~li~~Ag 101 (266)
T 1xq1_A 92 KLDILINNLG 101 (266)
T ss_dssp CCSEEEEECC
T ss_pred CCcEEEECCC
Confidence 6799998764
No 370
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=83.58 E-value=3 Score=37.87 Aligned_cols=81 Identities=16% Similarity=0.221 Sum_probs=56.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++. +++.++.+.+.++..|. ++.++..|..+...-. ..++
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55666 56677889998887663 3358999999 88888887777776663 5778888987643110 0124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+...
T Consensus 82 ~id~lv~nAg~~ 93 (246)
T 2uvd_A 82 QVDILVNNAGVT 93 (246)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 371
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=83.48 E-value=3.7 Score=37.86 Aligned_cols=81 Identities=11% Similarity=0.156 Sum_probs=54.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTI-KLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~-~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.++..++.+.+.+ +..|. ++.++.+|..+...-. ..++
T Consensus 21 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 21 GRVAL-VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55677 45567888888887653 3368999999998888777666 44554 5778888887643110 0124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+...
T Consensus 99 ~iD~lvnnAg~~ 110 (267)
T 1vl8_A 99 KLDTVVNAAGIN 110 (267)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999877543
No 372
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=83.46 E-value=3.5 Score=37.04 Aligned_cols=80 Identities=11% Similarity=0.145 Sum_probs=55.0
Q ss_pred CEEEEEcCCCchHHHHHHHHhc-CCcEEEE-EeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 243 WKVLDACSAPGNKTVHLAALMK-GKGKIVA-CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~-~~~~V~a-~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
.+|| +..|+|+.+.++++.+. ...+|++ .+.++..++.+.+.++..+. ++.++.+|..+...-. ..++.
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3455 66778999999888663 3357887 48888888888777776663 6788888987643110 01246
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.|+..+...
T Consensus 80 id~li~~Ag~~ 90 (244)
T 1edo_A 80 IDVVVNNAGIT 90 (244)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876543
No 373
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=83.39 E-value=7 Score=35.89 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=57.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHh-CCCcEEEEeccCCCC----CCCC------
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLS-GAANIEVLHGDFLNL----DPKD------ 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~-g~~~v~~~~~D~~~~----~~~~------ 308 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++. +++.++.+.+.++.. | .++.++.+|..+. ..-.
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHHH
Confidence 55666 66677889999887663 3368999999 988888877777665 5 3678888998875 2100
Q ss_pred -CCCCCccEEEEcCCCC
Q 013515 309 -PAYSEVRAILLDPSCS 324 (441)
Q Consensus 309 -~~~~~fD~Il~DpPCS 324 (441)
..++.+|.++..+-..
T Consensus 89 ~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHhcCCCCEEEECCCCC
Confidence 0124689999877543
No 374
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=83.39 E-value=2.9 Score=38.33 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=56.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.++++.+. ...+|+.+|.+++.++.+.+.++..+ .++.++..|..+...-. ..++.
T Consensus 6 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 6 EKVVI-ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 55666 56677888888887653 34689999999999988887776655 36888889987643110 11246
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+--
T Consensus 84 id~lv~nAg~ 93 (257)
T 3imf_A 84 IDILINNAAG 93 (257)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 375
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.38 E-value=2.8 Score=38.88 Aligned_cols=82 Identities=13% Similarity=0.228 Sum_probs=57.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEeccCCCCCCCC-------CCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAA--NIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~--~v~~~~~D~~~~~~~~-------~~~ 311 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+...|.. ++.++.+|+.+...-. ..+
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 6 NKTVI-ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 55666 55677888888887653 3468999999999888877777665531 6888889988643110 012
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+...
T Consensus 85 g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 85 GKIDVLVNNAGAA 97 (280)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877543
No 376
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=83.33 E-value=3.6 Score=36.94 Aligned_cols=79 Identities=11% Similarity=0.193 Sum_probs=53.7
Q ss_pred EEEEEcCCCchHHHHHHHHhcCC-cEEEEE-eCCHHHHHHHHHHHHHhCCCcEEE-EeccCCCCCCCC-------CCCCC
Q 013515 244 KVLDACSAPGNKTVHLAALMKGK-GKIVAC-ELNKERVRRLKDTIKLSGAANIEV-LHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 244 ~VLDl~ag~G~kt~~la~~~~~~-~~V~a~-D~~~~rl~~l~~~~~~~g~~~v~~-~~~D~~~~~~~~-------~~~~~ 313 (441)
+|| +..|+|+.+.++++.+... .+|+++ +.++..++.+.+.++..|.. +.. +.+|..+...-. ..++.
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-LVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS-CEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 455 5667899999998876443 588887 88988888877777766643 444 788887643110 01246
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.|+..+...
T Consensus 81 ~d~li~~Ag~~ 91 (245)
T 2ph3_A 81 LDTLVNNAGIT 91 (245)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 377
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=83.21 E-value=3.5 Score=38.60 Aligned_cols=80 Identities=9% Similarity=0.120 Sum_probs=55.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHH-----hCCCcEEEEeccCCCCCCCC-------
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKL-----SGAANIEVLHGDFLNLDPKD------- 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~-----~g~~~v~~~~~D~~~~~~~~------- 308 (441)
|.+||=.| |+|+.+.+++..+. ...+|+.++.+...++.+.+.++. .+ .++.++.+|+.+...-.
T Consensus 18 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 18 GQVAIVTG-GATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ-ARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCC-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCC-ccEEEEecCCCCHHHHHHHHHHHH
Confidence 56777554 67889988887653 346899999999988887777765 23 36888899987643110
Q ss_pred CCCCCccEEEEcCCC
Q 013515 309 PAYSEVRAILLDPSC 323 (441)
Q Consensus 309 ~~~~~fD~Il~DpPC 323 (441)
..++.+|.|+..+..
T Consensus 96 ~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 96 DTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 012368999987753
No 378
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.15 E-value=3.4 Score=38.31 Aligned_cols=82 Identities=11% Similarity=0.144 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-------------CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-------------NKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 306 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-------------~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~ 306 (441)
.|.+||= ..|+|+.+.+++..+. ...+|+.+|. +++.++.+.+.++..|. ++.++..|..+...
T Consensus 14 ~gk~~lV-TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFI-TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEE-ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHH
Confidence 4667774 4556778888877653 3468999998 78888888888777764 57788889876431
Q ss_pred CC-------CCCCCccEEEEcCCCC
Q 013515 307 KD-------PAYSEVRAILLDPSCS 324 (441)
Q Consensus 307 ~~-------~~~~~fD~Il~DpPCS 324 (441)
-. ..++.+|.++..+--.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 10 1124789999877543
No 379
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.03 E-value=13 Score=34.07 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=49.9
Q ss_pred CEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcC
Q 013515 243 WKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 321 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~Dp 321 (441)
.+||=.| + |..+.++++.+.. ..+|++++.++.....+.. .+++++.+|..++. ...+|.|+.-+
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----LDGVTHLLIST 71 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----cCCCCEEEECC
Confidence 5788888 5 9999999887643 3589999999876654432 35788999998855 26789999855
Q ss_pred C
Q 013515 322 S 322 (441)
Q Consensus 322 P 322 (441)
.
T Consensus 72 ~ 72 (286)
T 3ius_A 72 A 72 (286)
T ss_dssp C
T ss_pred C
Confidence 4
No 380
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.85 E-value=5 Score=36.52 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=55.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccC--CCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDF--LNLDPK-------DPAY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~--~~~~~~-------~~~~ 311 (441)
|.+||= ..|+|+.+..++..+. ...+|+.+|.+++.++.+.+.+...+...+.++..|. .+.... ...+
T Consensus 12 ~k~vlV-TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 12 DRIILV-TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCEEEE-eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 667774 4566788888877653 3468999999999999888888776544677888888 332110 0123
Q ss_pred CCccEEEEcCCC
Q 013515 312 SEVRAILLDPSC 323 (441)
Q Consensus 312 ~~fD~Il~DpPC 323 (441)
+.+|.++..+--
T Consensus 91 g~id~lv~nAg~ 102 (252)
T 3f1l_A 91 PRLDGVLHNAGL 102 (252)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 578999987753
No 381
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.66 E-value=5.6 Score=36.48 Aligned_cols=82 Identities=10% Similarity=0.087 Sum_probs=57.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+||=. .|+||.+.+++..+. ...+|+.+|.+++.++.+.+.+.. .+-.++.++..|..+...-. ..++
T Consensus 8 ~k~~lVT-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 8 EAVAVVT-GGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TCEEEEE-TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEe-CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5667744 456778888877653 346899999999999988888776 44445888889987643110 1124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+.-+
T Consensus 87 ~id~lvnnAg~~ 98 (265)
T 3lf2_A 87 CASILVNNAGQG 98 (265)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999877543
No 382
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.58 E-value=7.9 Score=35.68 Aligned_cols=125 Identities=8% Similarity=0.088 Sum_probs=76.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~------------~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.+|.+ .+.++.+...++..|. ++.++..|..+...-
T Consensus 9 ~gk~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVL-VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence 366777 45556788888877653 34689999987 7888888888877764 678888998764421
Q ss_pred C-------CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC-CcEEEE
Q 013515 308 D-------PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG-VERVVY 379 (441)
Q Consensus 308 ~-------~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~-~G~lvY 379 (441)
. ..++.+|.++..+.....+ .+. . .+.| .+.+.....-...+++.++..++ +|.+|+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~-----~~~--~-------~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLG-----AHL--P-------VQAF-ADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCC-----TTC--C-------THHH-HHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCccc-----CcC--C-------HHHH-HHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 0 1124789999877643322 110 0 0001 12233333445566677777554 678887
Q ss_pred EcC
Q 013515 380 STC 382 (441)
Q Consensus 380 sTC 382 (441)
.+.
T Consensus 152 isS 154 (287)
T 3pxx_A 152 TGS 154 (287)
T ss_dssp ECC
T ss_pred ecc
Confidence 654
No 383
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=82.47 E-value=4.3 Score=36.68 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC---CCCCCCcc
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---DPAYSEVR 315 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~~fD 315 (441)
.++.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+. .++.+...|..+...- ....+.+|
T Consensus 12 ~~~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 3467777 66667888888887663 34689999999988877665542 3677888888764311 01124689
Q ss_pred EEEEcCCCCC
Q 013515 316 AILLDPSCSG 325 (441)
Q Consensus 316 ~Il~DpPCSg 325 (441)
.++..+....
T Consensus 87 ~li~~Ag~~~ 96 (249)
T 3f9i_A 87 ILVCNAGITS 96 (249)
T ss_dssp EEEECCC---
T ss_pred EEEECCCCCC
Confidence 9998776443
No 384
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=82.37 E-value=3.3 Score=38.00 Aligned_cols=81 Identities=10% Similarity=0.067 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~-D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+|| +..|+|+.+.+++..+.. ..+|+.+ +.++..++.+.+.++..|. ++.++..|..+...-. ..+
T Consensus 3 ~~k~vl-VTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCAL-VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 355666 566678889888876643 3577775 8899988888888877664 5788889987643110 112
Q ss_pred CCccEEEEcCCC
Q 013515 312 SEVRAILLDPSC 323 (441)
Q Consensus 312 ~~fD~Il~DpPC 323 (441)
+.+|.++..+-.
T Consensus 81 g~id~lv~nAg~ 92 (258)
T 3oid_A 81 GRLDVFVNNAAS 92 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 467999987753
No 385
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=82.25 E-value=3.4 Score=39.13 Aligned_cols=78 Identities=5% Similarity=0.067 Sum_probs=47.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHH--HHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLK--DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~--~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+.+|| +..|+|+.+.++++.+. ...+|+++..++.....+. ..+. ...++.++.+|..+...-...+..+|.|+
T Consensus 9 ~~~vl-VTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi 85 (338)
T 2rh8_A 9 KKTAC-VVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIAGCDFVF 85 (338)
T ss_dssp CCEEE-EECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHcCCCEEE
Confidence 56788 56689999999987653 3357888777654321111 1121 11357888899876442211123579998
Q ss_pred EcCC
Q 013515 319 LDPS 322 (441)
Q Consensus 319 ~DpP 322 (441)
.-+.
T Consensus 86 h~A~ 89 (338)
T 2rh8_A 86 HVAT 89 (338)
T ss_dssp EESS
T ss_pred EeCC
Confidence 7653
No 386
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=82.14 E-value=3.6 Score=38.17 Aligned_cols=80 Identities=9% Similarity=0.008 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||=. .|+||.+..+++.+.. ..+|+.+|.+...++.+.+.+.. .| .++.++..|+.+...-. ..+
T Consensus 26 ~~k~~lVT-Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFIT-GGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36677744 4567888888876643 35899999999888777666654 34 46888899987643110 112
Q ss_pred CCccEEEEcCC
Q 013515 312 SEVRAILLDPS 322 (441)
Q Consensus 312 ~~fD~Il~DpP 322 (441)
+.+|.++..+-
T Consensus 104 g~id~lv~nAg 114 (277)
T 4fc7_A 104 GRIDILINCAA 114 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47899998775
No 387
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=82.12 E-value=5.7 Score=37.19 Aligned_cols=123 Identities=13% Similarity=0.053 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC--HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN--KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PA 310 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~--~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~ 310 (441)
.|.+||=.| |+|+.+.+++..+. ...+|+.++.+ ....+.+.+.++..|. ++.++.+|+.+...-. ..
T Consensus 48 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTG-GDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 366777555 57888888887663 33588888886 4567777777777774 6778888887643110 11
Q ss_pred CCCccEEEEcCCCCC-CcccccccCccCCCCCCCCCCCcccHHHHH----HHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 311 YSEVRAILLDPSCSG-SGTAAERLDHLLPSHASGHTADPTEMERLN----KLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 311 ~~~fD~Il~DpPCSg-~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~----~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
++.+|.++..+.-.. .+.+. | .+.++.. ....-...+++.++..++ +|.||+.+.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~---~--------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIK---D--------------LTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGG---G--------------CCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcc---c--------------CCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 246899998765322 11110 0 1233333 233345567777777554 687777543
No 388
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=82.05 E-value=3.4 Score=38.41 Aligned_cols=81 Identities=12% Similarity=0.127 Sum_probs=56.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
+.+|| +..|+|+.+..++..+.. ..+|++++.+++.++.+.+.++..|. ++.++.+|+.+...-. ..++.
T Consensus 44 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 44 NKVAL-VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SCEEE-EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 55677 455678899998887643 35888899998888877777766554 5778888987643110 01246
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.|+..+.-.
T Consensus 122 id~li~~Ag~~ 132 (285)
T 2c07_A 122 VDILVNNAGIT 132 (285)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876543
No 389
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.93 E-value=3.2 Score=39.78 Aligned_cols=53 Identities=19% Similarity=0.163 Sum_probs=38.8
Q ss_pred HhCCCCCCEEEEEcCCCch-HHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAPGN-KTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~G~-kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
...+++|++||=.|+|+++ .+..++.... ..+|+++|.++++++.+ +.+|.+.
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~----~~~Ga~~ 211 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLA----KKIGADV 211 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHH----HHTTCSE
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhh----hhcCCeE
Confidence 4568899999999998754 4445555543 47999999999988765 4567653
No 390
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=81.90 E-value=2 Score=45.68 Aligned_cols=128 Identities=14% Similarity=0.134 Sum_probs=73.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc---------C--CcEEEEEeC---CHHHHHHHH-----------HHHHHh-----CC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK---------G--KGKIVACEL---NKERVRRLK-----------DTIKLS-----GA 291 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~---------~--~~~V~a~D~---~~~rl~~l~-----------~~~~~~-----g~ 291 (441)
.-+|+|+|-|+|.-.+...+... . .-+++++|. +.+-+..+- +.++.. |+
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 45899999999998877665531 1 245899999 666665322 222222 11
Q ss_pred ---------CcEEEEeccCCCCCCCCC--CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHH
Q 013515 292 ---------ANIEVLHGDFLNLDPKDP--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAF 360 (441)
Q Consensus 292 ---------~~v~~~~~D~~~~~~~~~--~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~ 360 (441)
-.+++..+|+.+..+... ....||.|++|+... .++||. |+.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-----~~np~~-------------w~~--------- 199 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-----AKNPDM-------------WTQ--------- 199 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-----GGCGGG-------------SCH---------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-----cCChhh-------------hhH---------
Confidence 124566678765443221 015699999999632 356764 233
Q ss_pred HHHHHHHHhCCCC-CcEEEEEcCCCCChhcHHHHHHHhchhcCCCeEEe
Q 013515 361 QKKALRHALSFPG-VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 408 (441)
Q Consensus 361 Q~~lL~~a~~~~~-~G~lvYsTCS~~~~ENe~vV~~~l~~~~~~~~~~~ 408 (441)
+++....++++ ||++...||. ..|.+.|.. .+|.+.
T Consensus 200 --~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~L~~---aGf~v~ 236 (676)
T 3ps9_A 200 --NLFNAMARLARPGGTLATFTSA-------GFVRRGLQD---AGFTMQ 236 (676)
T ss_dssp --HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHH---HTCEEE
T ss_pred --HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHh---CCeEEE
Confidence 44555555556 4555433343 567777753 355543
No 391
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=81.87 E-value=2.8 Score=38.95 Aligned_cols=82 Identities=15% Similarity=0.227 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC------CCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD------PAYSE 313 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~------~~~~~ 313 (441)
.|.+|| +..|+||.+..++..+. ...+|+.+|.+++.++.+.+.+...|. ++.++..|..+..... ...+.
T Consensus 32 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTAL-VTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 366777 56667888888887653 346899999999888888888877664 6788899987654211 00146
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++.++--.
T Consensus 110 iD~lvnnAg~~ 120 (275)
T 4imr_A 110 VDILVINASAQ 120 (275)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 392
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.37 E-value=1.9 Score=33.73 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCC--cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGK--GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~--~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
.+.+|+=+|+ |+.+..++..+... .+|+++|.++++++.+. ..| +.+...|..+..........+|.|+
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~---~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMG---VATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTT---CEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCC---CcEEEecCCCHHHHHHHHcCCCEEE
Confidence 3567887777 77777776655322 58999999998887665 233 4566677654321100124679998
Q ss_pred EcCC
Q 013515 319 LDPS 322 (441)
Q Consensus 319 ~DpP 322 (441)
.-.|
T Consensus 75 ~~~~ 78 (118)
T 3ic5_A 75 SAAP 78 (118)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 7554
No 393
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.34 E-value=2.8 Score=40.33 Aligned_cols=52 Identities=15% Similarity=0.282 Sum_probs=40.2
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 013515 238 APKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 294 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v 294 (441)
.+++|++||=.|+|+ |..+.++++.++ ..+|+++|.++++++.++ .+|.+.+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~~ 220 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADAA 220 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCEE
Confidence 578999999998865 556677777663 369999999999998764 4787643
No 394
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.21 E-value=3.2 Score=40.06 Aligned_cols=53 Identities=23% Similarity=0.162 Sum_probs=39.2
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
...++++|++||-.|+|+ |..+.+++..++ .+|+++|.++++++.++ .+|.+.
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 215 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADV 215 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCE
Confidence 345788999999998754 455666666653 46999999999988764 468763
No 395
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.11 E-value=4.5 Score=37.96 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCC-chHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAP-GNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~-G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||=.|++. ++.+..++..+. ...+|+.+|.+++..+.+.+..+..| .+.++..|+.+...-. ..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367888777764 477877777653 34689999999877777777666665 3567888887643110 112
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+-..
T Consensus 107 g~iD~lVnnAG~~ 119 (296)
T 3k31_A 107 GSLDFVVHAVAFS 119 (296)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 5789999877543
No 396
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=81.07 E-value=3.2 Score=37.38 Aligned_cols=81 Identities=10% Similarity=0.149 Sum_probs=55.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.++++.+. ...+|++++.++..++.+.+.+.. .+. ++.++.+|..+...-. ..++
T Consensus 7 ~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 7 GKVSL-VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 55666 56678999999887653 346899999999888877776655 453 5778888887643110 0124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.|+..+...
T Consensus 85 ~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 85 GIDILVNNAGIT 96 (248)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 397
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=81.02 E-value=2.3 Score=41.08 Aligned_cols=54 Identities=26% Similarity=0.165 Sum_probs=39.5
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
...++++|++||=.|+|+ |..+.+++..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 214 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIAL----EYGATD 214 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHH----HHTCCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHH----HhCCce
Confidence 456788999999998765 45556666654 3348999999999888764 468753
No 398
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=80.78 E-value=3 Score=38.09 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCC----cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-------C
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGK----GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-------A 310 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~----~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-------~ 310 (441)
+.+|| +..|+|+.+.++++.+... .+|++++.++..++.+.+..+ .+ .++.++.+|+.+...-.. .
T Consensus 21 ~k~vl-ITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~-~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 21 MNSIL-ITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-NH-SNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp CSEEE-ESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-HC-TTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCEEE-EECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhc-cC-CceEEEEecCCChHHHHHHHHHHHHh
Confidence 55666 5556899999998876543 489999998776655543333 23 368888999886542110 0
Q ss_pred CC--CccEEEEcCCC
Q 013515 311 YS--EVRAILLDPSC 323 (441)
Q Consensus 311 ~~--~fD~Il~DpPC 323 (441)
++ .+|.|+..+-.
T Consensus 98 ~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 98 TKDQGLNVLFNNAGI 112 (267)
T ss_dssp HGGGCCSEEEECCCC
T ss_pred cCCCCccEEEECCCc
Confidence 12 58999987654
No 399
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=80.47 E-value=3.6 Score=37.62 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+||=. .|+|+.+.+++..+. ...+|+.+|.+.+.++.+.+.+ + .++.++..|..+...-. ..++
T Consensus 7 ~~k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALIT-GSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEE-TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEE-CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 46677744 467888888887653 3468999999988877665543 4 35778888987643110 1234
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+.-+.
T Consensus 82 ~id~lv~~Ag~~~ 94 (259)
T 4e6p_A 82 GLDILVNNAALFD 94 (259)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 7899999776543
No 400
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=80.46 E-value=4.1 Score=36.65 Aligned_cols=81 Identities=15% Similarity=0.203 Sum_probs=52.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~-D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+++ +.++..++.+.+.++..+. ++.++.+|..+...-. ..++
T Consensus 5 ~~~vl-ItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 5 GKTAI-VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTC-CEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CcEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 55677 55677889998887663 33588888 6677777777666766663 5788889987643110 0123
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.|+..+...
T Consensus 83 ~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 83 RIDILVNNAGIT 94 (247)
T ss_dssp CCCEEEECC---
T ss_pred CCCEEEECCCCC
Confidence 689999876543
No 401
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=80.45 E-value=4.6 Score=38.23 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=47.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEeccCCCCCCCCCCCCCccEEE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA--ANIEVLHGDFLNLDPKDPAYSEVRAIL 318 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~--~~v~~~~~D~~~~~~~~~~~~~fD~Il 318 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++.....+.... .+.- .+++++.+|..+...-......+|.|+
T Consensus 5 ~~~vl-VTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 5 SETVC-VTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLL-DLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHH-TSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHH-hcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 56777 67789999999987653 3357888887765333222211 1110 257888899876543211124579998
Q ss_pred EcCC
Q 013515 319 LDPS 322 (441)
Q Consensus 319 ~DpP 322 (441)
.-+.
T Consensus 83 h~A~ 86 (337)
T 2c29_D 83 HVAT 86 (337)
T ss_dssp ECCC
T ss_pred Eecc
Confidence 7653
No 402
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=80.45 E-value=4.6 Score=37.11 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=73.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCC---HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------C
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELN---KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------P 309 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~---~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~ 309 (441)
.|.+||=. .|+||.+..++..+.. ..+|+.++.+ .+.++.+.+.++..|. ++.++..|..+...-. .
T Consensus 10 ~~k~vlVT-Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIA-GGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEE-TCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTC-EEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence 36677744 4567788888887644 3578887654 5566666666665553 6888889988644210 1
Q ss_pred CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHH----HHHHHHHHHHHHHhCCCC-CcEEEEEcC
Q 013515 310 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLN----KLSAFQKKALRHALSFPG-VERVVYSTC 382 (441)
Q Consensus 310 ~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~----~l~~~Q~~lL~~a~~~~~-~G~lvYsTC 382 (441)
.++.+|.++..+-....+.+. | .+.++.. ........+++.++..++ +|.+|+.+.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~---~--------------~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIV---E--------------TSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGG---G--------------CCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCcc---c--------------CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 124689999876543322111 0 1233333 233344556777777654 577877654
No 403
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=80.44 E-value=4.6 Score=36.62 Aligned_cols=82 Identities=11% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
+.+|| +..|+|+.+.+++..+. ...+|+.++. +.+.++.+.+.++..|. ++.++.+|..+...-. ..++
T Consensus 4 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSAL-VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 44556 66677888998887663 3357888777 56888888888887774 5778888987643210 1124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+.-+.
T Consensus 82 ~id~lv~nAg~~~ 94 (246)
T 3osu_A 82 SLDVLVNNAGITR 94 (246)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998776443
No 404
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.27 E-value=2.6 Score=41.13 Aligned_cols=51 Identities=25% Similarity=0.261 Sum_probs=38.8
Q ss_pred hCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 237 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
+++++|++||-.|+|+ |..+.+++..++ .+|+++|.++++++.+++ +|.+.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~----lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA----LGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH----cCCcE
Confidence 4788999999998865 555666776653 479999999999887653 68754
No 405
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=80.22 E-value=5.1 Score=38.04 Aligned_cols=83 Identities=16% Similarity=0.204 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~------------~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.|.+|| +..|+||.+..++..+. ...+|+.+|.+ .+.++.+.+.++..|. ++.++..|..+...-
T Consensus 45 ~gk~~l-VTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAF-ITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 366677 56667888888887663 34689999886 7778777777777764 578888998764311
Q ss_pred C-------CCCCCccEEEEcCCCCC
Q 013515 308 D-------PAYSEVRAILLDPSCSG 325 (441)
Q Consensus 308 ~-------~~~~~fD~Il~DpPCSg 325 (441)
. ..++.+|+++.++-.+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCC
Confidence 0 11347899999776543
No 406
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=80.21 E-value=9.8 Score=34.13 Aligned_cols=79 Identities=10% Similarity=0.119 Sum_probs=52.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.++++.+. ...+|++++.++..++.+.+.+... .++.++.+|..+...-. ..++.
T Consensus 6 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 6 GKVAI-ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CcEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 55666 66678899999887653 3468999999988777665544322 46888889987643110 01235
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.|+..+..
T Consensus 83 id~li~~Ag~ 92 (251)
T 1zk4_A 83 VSTLVNNAGI 92 (251)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 407
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=80.15 E-value=5 Score=37.07 Aligned_cols=82 Identities=9% Similarity=0.089 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+||.+.+++..+. ...+|+.++. +...++.+.+.++..|. .+.++..|+.+...-. ..++
T Consensus 28 ~k~vl-VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 28 DRIAL-VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56666 55667888888887663 3458888888 78888888888877764 5778889988744210 1124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+--+.
T Consensus 106 ~id~lv~nAg~~~ 118 (269)
T 4dmm_A 106 RLDVLVNNAGITR 118 (269)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899999876443
No 408
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=80.14 E-value=0.95 Score=43.13 Aligned_cols=82 Identities=11% Similarity=0.017 Sum_probs=52.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC--CCccEEE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAIL 318 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~--~~fD~Il 318 (441)
+.+|| +..|+|+.+.++++.+. ...+|++++.+........+.+....-.++.++.+|..+...-..-. ..+|.|+
T Consensus 5 ~~~vl-VTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 5 KGTIL-VTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CcEEE-EecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 55777 55678999999987663 34689999987655544444444432245788889987643111001 2579998
Q ss_pred EcCCCC
Q 013515 319 LDPSCS 324 (441)
Q Consensus 319 ~DpPCS 324 (441)
..+..+
T Consensus 84 h~A~~~ 89 (341)
T 3enk_A 84 HFAALK 89 (341)
T ss_dssp ECCCCC
T ss_pred ECcccc
Confidence 866543
No 409
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=80.13 E-value=7.8 Score=35.86 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHH-HHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKE-RVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~-rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+.. ..+.+.+.++..|. ++.++..|..+...-. ..++
T Consensus 29 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 29 GKVAL-VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55666 56667889998887663 3358999998854 45656666666664 5778888887643110 1124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+--.
T Consensus 107 ~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 107 KLDIVCSNSGVV 118 (283)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999877543
No 410
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=79.99 E-value=3.8 Score=37.68 Aligned_cols=80 Identities=10% Similarity=0.099 Sum_probs=55.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEeccCCCCCCCC-------CCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLS--GAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~--g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
|.+||=. .|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+... | .++.++.+|..+...-. ..+
T Consensus 13 ~k~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 13 DRVVLIT-GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPD-AEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTT-CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-ceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5667744 457888888877653 3358999999999888877777655 4 35778888987643110 012
Q ss_pred CCccEEEEcCCC
Q 013515 312 SEVRAILLDPSC 323 (441)
Q Consensus 312 ~~fD~Il~DpPC 323 (441)
+.+|.++..+--
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987653
No 411
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=79.87 E-value=2.9 Score=36.46 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=49.2
Q ss_pred EEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC---CCCccEEEEc
Q 013515 244 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA---YSEVRAILLD 320 (441)
Q Consensus 244 ~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~---~~~fD~Il~D 320 (441)
+|| +..|+|+.+.++++.+... +|++++.++..++.+.+.+. . .++.+|..+...-..- ++.+|.|+..
T Consensus 2 ~vl-VtGasg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 2 RVL-ITGATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp EEE-EETTTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred EEE-EEcCCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 344 4457899999999988777 99999999988776655432 1 6777888754311000 1368999986
Q ss_pred CCC
Q 013515 321 PSC 323 (441)
Q Consensus 321 pPC 323 (441)
+.-
T Consensus 74 ag~ 76 (207)
T 2yut_A 74 VGK 76 (207)
T ss_dssp CCC
T ss_pred CCc
Confidence 653
No 412
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=79.59 E-value=8.7 Score=36.43 Aligned_cols=83 Identities=8% Similarity=0.165 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||=.| |+|+.+.+++..+. ...+|+.++.++..++.+.+.+...|. .++.++..|..+...-. ..+
T Consensus 7 ~~k~vlVTG-as~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTG-GANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEET-TTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcC-CchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 366777555 56888888887663 346899999999999998888887764 26888999987643110 112
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++.++.-.
T Consensus 86 g~id~lv~nAg~~ 98 (319)
T 3ioy_A 86 GPVSILCNNAGVN 98 (319)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 5689999977543
No 413
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=79.56 E-value=1.4 Score=42.48 Aligned_cols=70 Identities=11% Similarity=0.016 Sum_probs=41.3
Q ss_pred CcEEEEeccCCCCCCCCCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 013515 292 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 371 (441)
Q Consensus 292 ~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~ 371 (441)
+...++++|..+.....+ .++||.|++|||...... . .+ + ..............|..+.++
T Consensus 13 ~~~~ii~gD~~~~l~~l~-~~svDlI~tDPPY~~~~~--~----~y---------~---~~~~~~~~~~l~~~l~~~~rv 73 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP-EESISLVMTSPPFALQRK--K----EY---------G---NLEQHEYVDWFLSFAKVVNKK 73 (323)
T ss_dssp SSEEEEESCHHHHGGGSC-SSCEEEEEECCCCSSSCS--C----SS---------C---SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeCcHHHHHhhCC-CCCeeEEEECCCCCCCcc--c----cc---------C---CcCHHHHHHHHHHHHHHHHHH
Confidence 357789999876432211 268999999999853211 0 00 1 012234445556778888888
Q ss_pred CC-CcEEEEE
Q 013515 372 PG-VERVVYS 380 (441)
Q Consensus 372 ~~-~G~lvYs 380 (441)
|+ +|.++..
T Consensus 74 Lk~~G~i~i~ 83 (323)
T 1boo_A 74 LKPDGSFVVD 83 (323)
T ss_dssp EEEEEEEEEE
T ss_pred CcCCcEEEEE
Confidence 88 4555443
No 414
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=79.52 E-value=4.9 Score=36.74 Aligned_cols=119 Identities=9% Similarity=0.171 Sum_probs=72.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+||=.| |+|+.+.+++..+. ...+|+.+|.+++.++.+.+.+ | .++.++..|..+...-. ..++
T Consensus 7 ~gk~~lVTG-as~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIG-GTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 466777555 56778888877653 3468999999998887766554 3 36788889987654210 1134
Q ss_pred CccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHH----HHHHHHHHHHHHhCCCC-CcEEEEEc
Q 013515 313 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK----LSAFQKKALRHALSFPG-VERVVYST 381 (441)
Q Consensus 313 ~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~----l~~~Q~~lL~~a~~~~~-~G~lvYsT 381 (441)
.+|.++..+..+..+.+.. .+.++... ...-...+.+.++..++ +|.||+.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~-----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQ-----------------VSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SEEEEEECCCCCCCBCGGG-----------------CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhh-----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 7899998776543332210 12333332 22344456666666544 67777754
No 415
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=79.32 E-value=3.2 Score=37.37 Aligned_cols=79 Identities=10% Similarity=0.144 Sum_probs=54.1
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCC-c-------EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC------
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGK-G-------KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD------ 308 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~-~-------~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~------ 308 (441)
.+|| +..|+|+.+.+++..+... . .|+.++.++..++.+.+.+...+ .++.++.+|+.+...-.
T Consensus 3 k~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 3 HILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp EEEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHHHH
Confidence 3555 5557888998888766332 3 79999999988888777766555 36888889987643110
Q ss_pred -CCCCCccEEEEcCCC
Q 013515 309 -PAYSEVRAILLDPSC 323 (441)
Q Consensus 309 -~~~~~fD~Il~DpPC 323 (441)
..++.+|.|+..+.-
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHHTSCCSEEEECCCC
T ss_pred HHhCCCCCEEEEcCCc
Confidence 012468999987653
No 416
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=79.18 E-value=6.5 Score=36.15 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.++. +++..+.+.+.++..|. ++.++..|..+..... ..+
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVL-ITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 366777 56667888888877653 3458999998 67777888888887774 5788889987643110 012
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+.-.
T Consensus 106 g~id~li~nAg~~ 118 (271)
T 4iin_A 106 GGLSYLVNNAGVV 118 (271)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4689999877543
No 417
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=79.15 E-value=2.1 Score=38.84 Aligned_cols=80 Identities=10% Similarity=0.195 Sum_probs=56.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC-HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN-KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~-~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|++++.+ +..++.+.+.++..+ .++.++.+|..+...-. ..++
T Consensus 7 ~k~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 7 GKRVL-ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56777 66678999999887663 33589999998 777777777776655 36888899987643110 0123
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.|+..+..
T Consensus 85 ~id~vi~~Ag~ 95 (258)
T 3afn_B 85 GIDVLINNAGG 95 (258)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 418
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=78.90 E-value=2.9 Score=37.79 Aligned_cols=80 Identities=9% Similarity=0.158 Sum_probs=52.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTI-KLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~-~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.+ +..+ .++.++.+|..+...-. ..++
T Consensus 2 ~k~vl-ItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAI-VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 34566 44467888888887653 3358999999998887766555 3333 35788889987643110 0123
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.|+..+..
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987654
No 419
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=78.82 E-value=13 Score=33.71 Aligned_cols=77 Identities=10% Similarity=0.158 Sum_probs=52.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.+ | .++.++..|..+...-. ..++.
T Consensus 6 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 6 GKVAL-VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-ERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 55666 56678889998887663 3358999999988777665444 4 35778888987643110 01246
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+.-
T Consensus 81 id~lv~~Ag~ 90 (253)
T 1hxh_A 81 LNVLVNNAGI 90 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999987654
No 420
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=78.76 E-value=4.8 Score=37.55 Aligned_cols=80 Identities=9% Similarity=0.091 Sum_probs=55.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLNLDPK-------DPAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~-g~~~v~~~~~D~~~~~~~-------~~~~~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.+... + .++.++.+|..+...- ...++
T Consensus 26 ~k~vl-ITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 26 GKVAF-ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 56777 44567888888887653 3468999999998888777666654 5 3688889998764311 01134
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.|+..+..
T Consensus 104 ~id~li~~Ag~ 114 (302)
T 1w6u_A 104 HPNIVINNAAG 114 (302)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67999987754
No 421
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=78.74 E-value=4.5 Score=39.36 Aligned_cols=54 Identities=24% Similarity=0.222 Sum_probs=40.4
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
...++++|++||=.|+|+ |..+.+++..+ +..+|+++|.++++++.+++ +|.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~----lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAEE----VGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHHH----HTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH----cCCCE
Confidence 456789999999998765 55566666664 33589999999999887654 68753
No 422
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=78.51 E-value=3 Score=38.19 Aligned_cols=81 Identities=16% Similarity=0.082 Sum_probs=58.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||= ..|+||.+..++..+. ...+|+.+|.+++.++.+.+.++..|. ++.++..|+.+...-. .. +.
T Consensus 7 ~k~vlV-TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~-g~ 83 (252)
T 3h7a_A 7 NATVAV-IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADAH-AP 83 (252)
T ss_dssp SCEEEE-ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHH-SC
T ss_pred CCEEEE-ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHhh-CC
Confidence 566774 4556778888877653 346899999999999999888888764 6888999987644211 01 36
Q ss_pred ccEEEEcCCCCC
Q 013515 314 VRAILLDPSCSG 325 (441)
Q Consensus 314 fD~Il~DpPCSg 325 (441)
+|.++..+-...
T Consensus 84 id~lv~nAg~~~ 95 (252)
T 3h7a_A 84 LEVTIFNVGANV 95 (252)
T ss_dssp EEEEEECCCCCC
T ss_pred ceEEEECCCcCC
Confidence 899998776543
No 423
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=78.25 E-value=2.4 Score=37.55 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=49.5
Q ss_pred EEEEEcCCCchHHHHHHHHhcCC-cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC-CCCCCCCCCCccEEEEcC
Q 013515 244 KVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN-LDPKDPAYSEVRAILLDP 321 (441)
Q Consensus 244 ~VLDl~ag~G~kt~~la~~~~~~-~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~-~~~~~~~~~~fD~Il~Dp 321 (441)
+|| +..|+|+.+.++++.+... .+|++++.++..+... .+++++.+|..+ ...-...+..+|.|+..+
T Consensus 2 ~il-ItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 2 KIF-IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp EEE-EESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred eEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 455 4457899999998877543 5899999997654322 568899999987 321111235689999866
Q ss_pred CCCC
Q 013515 322 SCSG 325 (441)
Q Consensus 322 PCSg 325 (441)
..+.
T Consensus 72 g~~~ 75 (219)
T 3dqp_A 72 GSGG 75 (219)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 6443
No 424
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=78.22 E-value=1.8 Score=39.48 Aligned_cols=82 Identities=11% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEeccCCCCCCCC------
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA------ANIEVLHGDFLNLDPKD------ 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~------~~v~~~~~D~~~~~~~~------ 308 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.++..|. .++.++.+|..+...-.
T Consensus 7 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 7 SALAL-VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 55677 55667888988887653 336899999999888776665544431 35678888887643110
Q ss_pred -CCCCCc-cEEEEcCCCC
Q 013515 309 -PAYSEV-RAILLDPSCS 324 (441)
Q Consensus 309 -~~~~~f-D~Il~DpPCS 324 (441)
..++.. |.|+..+...
T Consensus 86 ~~~~g~i~d~vi~~Ag~~ 103 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGIT 103 (264)
T ss_dssp HHHHSSCCSEEEECCCCC
T ss_pred HHHhCCCCeEEEECCCcC
Confidence 012344 9999876543
No 425
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=78.21 E-value=7.6 Score=37.04 Aligned_cols=62 Identities=11% Similarity=0.010 Sum_probs=46.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEe-CCHHHHHHHHHHHH-HhCCCcEEEEeccCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACE-LNKERVRRLKDTIK-LSGAANIEVLHGDFLNLD 305 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D-~~~~rl~~l~~~~~-~~g~~~v~~~~~D~~~~~ 305 (441)
|.+|| +..|+|+.+..++..+. ...+|+.++ .+++.++.+.+.+. ..| .++.++..|+.+..
T Consensus 46 ~k~~l-VTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 46 VPVAL-VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 110 (328)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCch
Confidence 55666 66677889998887663 346899999 99998888877776 445 46888899988755
No 426
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=78.08 E-value=8.5 Score=35.52 Aligned_cols=80 Identities=13% Similarity=0.166 Sum_probs=56.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||=.| |+|+.+.+++..+. ...+|++++.+++.++.+.+.++..|. ++.++.+|..+...-. ..++.
T Consensus 22 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 22 SEVALVTG-ATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp SCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 56777554 57888888887653 335899999999988887777776664 5778888987643110 11346
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+..
T Consensus 100 iD~lv~~Ag~ 109 (277)
T 2rhc_B 100 VDVLVNNAGR 109 (277)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987754
No 427
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=78.02 E-value=6.8 Score=35.04 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC---CCCCCCccE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---DPAYSEVRA 316 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~~fD~ 316 (441)
.|.+|| +..|+|+.+.++++.+. ...+|++++.++..++.+.+. . .+++++.+|..+...- ...++.+|.
T Consensus 6 ~~~~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 6 SGLRAL-VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C--PGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S--TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c--cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 366777 55567889999887663 346899999998877655432 2 2355667888764310 012356899
Q ss_pred EEEcCCCC
Q 013515 317 ILLDPSCS 324 (441)
Q Consensus 317 Il~DpPCS 324 (441)
|+..+...
T Consensus 80 vi~~Ag~~ 87 (244)
T 1cyd_A 80 LVNNAALV 87 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 99876543
No 428
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=78.00 E-value=3.7 Score=39.09 Aligned_cols=83 Identities=12% Similarity=0.183 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC----------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN----------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD- 308 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~----------~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~- 308 (441)
.|.+|| +..|+||.+..++..+. ...+|+.+|.+ ...++.+.+.+...|. ++.++.+|..+...-.
T Consensus 26 ~gk~vl-VTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVI-VTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH
Confidence 466777 55667888888887653 34689999987 6777877777777764 6788888987643210
Q ss_pred ------CCCCCccEEEEcCCCCC
Q 013515 309 ------PAYSEVRAILLDPSCSG 325 (441)
Q Consensus 309 ------~~~~~fD~Il~DpPCSg 325 (441)
..++.+|.++..+-...
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 11246899988775443
No 429
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=77.91 E-value=8.3 Score=35.95 Aligned_cols=62 Identities=11% Similarity=0.010 Sum_probs=46.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEe-CCHHHHHHHHHHHH-HhCCCcEEEEeccCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACE-LNKERVRRLKDTIK-LSGAANIEVLHGDFLNLD 305 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D-~~~~rl~~l~~~~~-~~g~~~v~~~~~D~~~~~ 305 (441)
|.+|| +.-|+|+.+..++..+. ...+|+.++ .+++.++.+.+.+. ..| .++.++..|+.+..
T Consensus 9 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 9 VPVAL-VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVA 73 (291)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSC
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCcc
Confidence 55666 55667888888887663 346899999 99988888877776 445 46788889988755
No 430
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=77.84 E-value=3.7 Score=37.12 Aligned_cols=79 Identities=10% Similarity=0.175 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcE-EEEeccCCCCCCCCC------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGDFLNLDPKDP------AYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v-~~~~~D~~~~~~~~~------~~~ 312 (441)
.|.+|| +..|+|+.+.+++..+. ...+|++++.+++.++.+.+.+ +. ++ .++.+|..+...-.. .++
T Consensus 10 ~~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAA-VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GA-AVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GG-GEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cc-cceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 356777 44567888888887663 3358999999988777665544 32 45 788888876431100 024
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.|+..+...
T Consensus 85 ~id~li~~Ag~~ 96 (254)
T 2wsb_A 85 PVSILVNSAGIA 96 (254)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCccC
Confidence 689999877644
No 431
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=77.82 E-value=3.8 Score=39.67 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=37.8
Q ss_pred HHhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHH
Q 013515 235 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDT 285 (441)
Q Consensus 235 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~ 285 (441)
...++++|++||=.|+|+ |..+.++++.+ +...|+++|.++++++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh
Confidence 345788999999998755 55566677665 334599999999999988764
No 432
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=77.80 E-value=21 Score=36.60 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhc--CCcEEEEE-eCC-------------HHHHHHHHHHHHHhCCCcEEEEeccCC
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMK--GKGKIVAC-ELN-------------KERVRRLKDTIKLSGAANIEVLHGDFL 302 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~--~~~~V~a~-D~~-------------~~rl~~l~~~~~~~g~~~v~~~~~D~~ 302 (441)
..++.+|| +..|+||.+.++++.+. +...|+.+ +.+ ...++.+.+.++..|. ++.++..|+.
T Consensus 248 ~~~~~~vL-ITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvt 325 (525)
T 3qp9_A 248 WQADGTVL-VTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA-TATVVTCDLT 325 (525)
T ss_dssp SCTTSEEE-ESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC-EEEEEECCTT
T ss_pred ecCCCEEE-EECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC-EEEEEECCCC
Confidence 35677777 77789999999888763 22346666 776 3556666666777775 6888999988
Q ss_pred CCCC------CCCCCCCccEEEEcCCCCCCc
Q 013515 303 NLDP------KDPAYSEVRAILLDPSCSGSG 327 (441)
Q Consensus 303 ~~~~------~~~~~~~fD~Il~DpPCSg~G 327 (441)
+... ....++.+|.|+..+.-...+
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~ 356 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLPPTVDSE 356 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECCCCCCCC
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCcCCCCC
Confidence 6431 111246789999877654433
No 433
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=77.34 E-value=3.9 Score=38.09 Aligned_cols=84 Identities=7% Similarity=0.066 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC-CCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL-DPK-------DPAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~-~~~-------~~~~ 311 (441)
.+.+|| +..|+||.+.+++..+. ...+|+.++.+...++.+.+.+...+-.++.++..|..+. ... ...+
T Consensus 11 ~~k~vl-ITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAV-VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEE-EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 355666 66667889988887663 3469999999999998888888776656789999999875 210 0112
Q ss_pred CCccEEEEcCCCCC
Q 013515 312 SEVRAILLDPSCSG 325 (441)
Q Consensus 312 ~~fD~Il~DpPCSg 325 (441)
+.+|+++..+...+
T Consensus 90 g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 90 GKLDILVNNAGVAG 103 (311)
T ss_dssp SSCCEEEECCCCCS
T ss_pred CCCCEEEECCcccc
Confidence 47899999876544
No 434
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=77.23 E-value=5.9 Score=36.15 Aligned_cols=81 Identities=7% Similarity=0.142 Sum_probs=54.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHH-HHHHHHHHHHh-CCCcEEEEeccCCCCCCCC-------CCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKER-VRRLKDTIKLS-GAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~r-l~~l~~~~~~~-g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.++.. ++.+.+.+... |. ++.++..|..+...-. ..+
T Consensus 4 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 4 GKVAV-VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 55666 55667888988887663 34589999999877 77776666554 53 5778888887643110 012
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+...
T Consensus 82 g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 82 GRIDILVNNAGIQ 94 (260)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877543
No 435
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=77.16 E-value=5 Score=38.46 Aligned_cols=51 Identities=14% Similarity=-0.022 Sum_probs=37.9
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 238 APKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
++ +|++||-.|+|+ |..+.+++..+.+..+|+++|.++++++.+++ +|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE
Confidence 77 999999999864 55566677765112579999999999887654 67654
No 436
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=77.13 E-value=2.6 Score=40.33 Aligned_cols=81 Identities=17% Similarity=0.165 Sum_probs=49.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCH----HHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNK----ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~----~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++ ..+..+.+.+....-.++.++.+|..+...-......+|.
T Consensus 27 ~~~vl-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 27 PKVWL-ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCeEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 56788 55568999999887653 335899999864 3444443322211113688889998764311111236799
Q ss_pred EEEcCCC
Q 013515 317 ILLDPSC 323 (441)
Q Consensus 317 Il~DpPC 323 (441)
|+.-+..
T Consensus 106 vih~A~~ 112 (352)
T 1sb8_A 106 VLHQAAL 112 (352)
T ss_dssp EEECCSC
T ss_pred EEECCcc
Confidence 9886553
No 437
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=77.03 E-value=5.8 Score=36.79 Aligned_cols=82 Identities=10% Similarity=0.163 Sum_probs=57.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||=.| |+||.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|+.+...-. ..++.
T Consensus 24 ~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 24 PQTAFVTG-VSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 66777555 66778888877653 346899999999999988888877664 5788889987643110 11246
Q ss_pred ccEEEEcCCCCC
Q 013515 314 VRAILLDPSCSG 325 (441)
Q Consensus 314 fD~Il~DpPCSg 325 (441)
+|.++..+....
T Consensus 102 id~lv~nAg~~~ 113 (279)
T 3sju_A 102 IGILVNSAGRNG 113 (279)
T ss_dssp CCEEEECCCCCC
T ss_pred CcEEEECCCCCC
Confidence 899998776543
No 438
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.03 E-value=7.6 Score=35.76 Aligned_cols=80 Identities=13% Similarity=0.210 Sum_probs=56.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC-C
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY-S 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~-~ 312 (441)
|.+||=.| |+|+.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|..+...-. ..+ +
T Consensus 21 ~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 21 GTTALVTG-GSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEC-CcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 66777555 57888888877653 336899999999988887777776664 5778888987643110 012 5
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+.-
T Consensus 99 ~id~lv~nAg~ 109 (273)
T 1ae1_A 99 KLNILVNNAGV 109 (273)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 68999987753
No 439
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=77.00 E-value=4 Score=38.88 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=49.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHh-cCCcEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeccCCCCCCCCCCCCCccE
Q 013515 242 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSG----AANIEVLHGDFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~-~~~~~V~a~D~~~~rl~~l~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~fD~ 316 (441)
+.+|| +..|+|..+.+++..+ ....+|++++.++.........+.... ..+++++.+|..+...-......+|.
T Consensus 25 ~~~vl-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWL-ITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 56888 5567899999998765 334689999985432222222222221 14688999998764321111246899
Q ss_pred EEEcCC
Q 013515 317 ILLDPS 322 (441)
Q Consensus 317 Il~DpP 322 (441)
|+.-+.
T Consensus 104 Vih~A~ 109 (351)
T 3ruf_A 104 VLHQAA 109 (351)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998554
No 440
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=76.75 E-value=7.2 Score=35.31 Aligned_cols=80 Identities=19% Similarity=0.202 Sum_probs=56.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||=.| |+|+.+..++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|..+...-. ..++.
T Consensus 7 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 7 GKVALITG-ASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56677554 56888888877653 335899999999998888877776664 5778888987643110 01246
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+.-
T Consensus 85 id~lv~nAg~ 94 (247)
T 2jah_A 85 LDILVNNAGI 94 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 441
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=76.44 E-value=8 Score=35.24 Aligned_cols=80 Identities=9% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC-C
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY-S 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~-~ 312 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++.+|..+...-. ..+ +
T Consensus 9 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 9 GCTAL-VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 66777 44567888888877653 346899999999988887777766653 6778888987643110 012 5
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+..
T Consensus 87 ~id~lv~~Ag~ 97 (260)
T 2ae2_A 87 KLNILVNNAGI 97 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987754
No 442
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=76.44 E-value=11 Score=32.83 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=48.4
Q ss_pred EEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCC
Q 013515 244 KVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 244 ~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpP 322 (441)
+|| +..|+|+.+.++++.+. ...+|++++.++..+..+. .+++++.+|..+... ..+..+|.|+..+.
T Consensus 2 kvl-VtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIG-IIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------KDINILQKDIFDLTL--SDLSDQNVVVDAYG 70 (221)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred eEE-EEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence 455 44568999998887653 3368999999987765432 457888999887654 22457899998655
Q ss_pred C
Q 013515 323 C 323 (441)
Q Consensus 323 C 323 (441)
.
T Consensus 71 ~ 71 (221)
T 3ew7_A 71 I 71 (221)
T ss_dssp S
T ss_pred C
Confidence 3
No 443
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.26 E-value=5.3 Score=36.81 Aligned_cols=81 Identities=12% Similarity=0.181 Sum_probs=53.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEeccCCCCCCCC-------CCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA--ANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~--~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
|.+|| +..|+|+.+.+++..+. ...+|++++.+++.++.+.+.+...+. .++.++.+|..+...-. ..+
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 6 EKVAI-ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 55666 56667888988887653 346899999999888877666632221 35788888987643110 012
Q ss_pred CCccEEEEcCCC
Q 013515 312 SEVRAILLDPSC 323 (441)
Q Consensus 312 ~~fD~Il~DpPC 323 (441)
+.+|.++..+..
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 468999987754
No 444
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=76.18 E-value=3.4 Score=40.22 Aligned_cols=53 Identities=13% Similarity=0.108 Sum_probs=39.1
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||-.|+|+ |..+.++|..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcE
Confidence 35678999999998754 445666666653 348999999999988764 478754
No 445
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=76.03 E-value=5.7 Score=36.54 Aligned_cols=77 Identities=10% Similarity=0.104 Sum_probs=50.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+. .+ .++.++..|..+...-. ..++.
T Consensus 6 ~k~vl-ITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 6 GKTIL-VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LE-AEAIAVVADVSDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CC-SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hc-CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56677 44567888888887653 336899999998877655443 23 46778888987643110 11246
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+..
T Consensus 81 iD~lvnnAg~ 90 (263)
T 2a4k_A 81 LHGVAHFAGV 90 (263)
T ss_dssp CCEEEEGGGG
T ss_pred CcEEEECCCC
Confidence 7999987653
No 446
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=75.98 E-value=37 Score=34.13 Aligned_cols=78 Identities=21% Similarity=0.167 Sum_probs=54.3
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCC-cEEEEEeCCHH---HHHHHHHHHHHhC--------CCcEEEEeccCCCCCCCCCC
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKE---RVRRLKDTIKLSG--------AANIEVLHGDFLNLDPKDPA 310 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~-~~V~a~D~~~~---rl~~l~~~~~~~g--------~~~v~~~~~D~~~~~~~~~~ 310 (441)
.+|| +..|+|..+.+++..+... .+|++++.++. ..+.+.+.++... ..++.++.+|..+...-. .
T Consensus 151 ~~VL-VTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 228 (508)
T 4f6l_B 151 GNTL-LTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 228 (508)
T ss_dssp EEEE-ESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred CeEE-EECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence 4566 6778999999999887543 58999998765 4555555554431 257899999998744322 3
Q ss_pred CCCccEEEEcCC
Q 013515 311 YSEVRAILLDPS 322 (441)
Q Consensus 311 ~~~fD~Il~DpP 322 (441)
...+|.|+--+-
T Consensus 229 ~~~~D~Vih~Aa 240 (508)
T 4f6l_B 229 PENMDTIIHAGA 240 (508)
T ss_dssp SSCCSEEEECCC
T ss_pred ccCCCEEEECCc
Confidence 467899998554
No 447
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=75.63 E-value=22 Score=35.93 Aligned_cols=86 Identities=14% Similarity=0.117 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCC--cEEEEEeCCHH---HHHHHHHHHHHhCCCcEEEEeccCCCCCC------C
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGK--GKIVACELNKE---RVRRLKDTIKLSGAANIEVLHGDFLNLDP------K 307 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~--~~V~a~D~~~~---rl~~l~~~~~~~g~~~v~~~~~D~~~~~~------~ 307 (441)
..++.+|| +..|+|+.+.++++.+... .+|+.++.+.. .++.+.+.++..|. ++.++.+|+.+... .
T Consensus 223 ~~~~~~vL-ITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~ 300 (486)
T 2fr1_A 223 WKPTGTVL-VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGG 300 (486)
T ss_dssp CCCCSEEE-EETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHT
T ss_pred cCCCCEEE-EECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHHH
Confidence 45677888 6667899999998876432 35899998864 44555556666674 68888899876331 1
Q ss_pred CCCCCCccEEEEcCCCCCC
Q 013515 308 DPAYSEVRAILLDPSCSGS 326 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~ 326 (441)
...+..+|.|+..+.-...
T Consensus 301 i~~~g~ld~VIh~AG~~~~ 319 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAATLDD 319 (486)
T ss_dssp SCTTSCEEEEEECCCCCCC
T ss_pred HHhcCCCcEEEECCccCCC
Confidence 1123567999987654433
No 448
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=75.54 E-value=3.6 Score=40.02 Aligned_cols=53 Identities=23% Similarity=0.295 Sum_probs=38.7
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||-.|+|+ |..+.+++..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 240 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAK----VFGATD 240 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCCE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HhCCce
Confidence 35678999999998754 44556666664 3348999999999988764 478754
No 449
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=75.20 E-value=3.9 Score=39.70 Aligned_cols=53 Identities=19% Similarity=0.225 Sum_probs=38.8
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||-.|+|+ |..+.+++..++ ..+|+++|.++++++.++ .+|.+.
T Consensus 185 ~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCce
Confidence 35678999999998754 445566666653 348999999999988764 468754
No 450
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=75.14 E-value=4.3 Score=35.74 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=48.1
Q ss_pred EEEEEcCCCchHHHHHHHHh-cCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEcCC
Q 013515 244 KVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 322 (441)
Q Consensus 244 ~VLDl~ag~G~kt~~la~~~-~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~DpP 322 (441)
+|| +..|+|+.+.++++.+ ....+|++++.++..+..+. + .+++++.+|..+... ..+..+|.|+..+.
T Consensus 2 kil-VtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIA-VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------G-ATVATLVKEPLVLTE--ADLDSVDAVVDALS 71 (224)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------C-TTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred EEE-EEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------C-CCceEEecccccccH--hhcccCCEEEECCc
Confidence 455 4456899999988765 33468999999987765331 1 357888999887654 22457899998554
No 451
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=75.13 E-value=2.8 Score=37.63 Aligned_cols=77 Identities=14% Similarity=0.118 Sum_probs=50.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCC---cEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-------CC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGK---GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-------AY 311 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~---~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-------~~ 311 (441)
+.+|| +..|+|+.+.+++..+... .+|++++.++..++.+.+. .-.++.++..|+.+...-.. .+
T Consensus 3 ~k~vl-ItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 3 PGSVV-VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CSEEE-ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEE-EecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc----cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 45666 5567789999998876443 5899999998776654332 12468888899876431100 01
Q ss_pred C--CccEEEEcCCC
Q 013515 312 S--EVRAILLDPSC 323 (441)
Q Consensus 312 ~--~fD~Il~DpPC 323 (441)
+ .+|.|+..+.-
T Consensus 78 g~~~id~li~~Ag~ 91 (250)
T 1yo6_A 78 GSDGLSLLINNAGV 91 (250)
T ss_dssp GGGCCCEEEECCCC
T ss_pred CCCCCcEEEECCcc
Confidence 2 68999987643
No 452
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=74.94 E-value=6.9 Score=37.33 Aligned_cols=55 Identities=15% Similarity=0.107 Sum_probs=39.6
Q ss_pred HHHhCCCCCCEEEEEcCCCchH-HHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 234 AAALAPKPGWKVLDACSAPGNK-TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 234 ~~~l~~~~g~~VLDl~ag~G~k-t~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
......++|++||=.|+|+.|. +.+++..+ +...++++|.++++++.++ ++|.+.
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~----~lGa~~ 208 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAK----SFGAMQ 208 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHH----HcCCeE
Confidence 3445678999999998876443 45556654 3467899999999988764 578753
No 453
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=74.66 E-value=3.9 Score=39.76 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=38.6
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||-.|+|+ |..+.+++..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 239 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAK----EVGATE 239 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCce
Confidence 35678999999998754 44556666664 3348999999999988764 578753
No 454
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=74.52 E-value=8.4 Score=35.43 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~------------~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.|.+||=. .|+|+.+.+++..+. ...+|+.+|.+ .+.++.+.+.++..|. ++.++..|..+...-
T Consensus 12 ~gk~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFIT-GAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEE-CCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 36677744 467788888877663 34689999987 7888888777777774 688889998864421
Q ss_pred C-------CCCCCccEEEEcCCC
Q 013515 308 D-------PAYSEVRAILLDPSC 323 (441)
Q Consensus 308 ~-------~~~~~fD~Il~DpPC 323 (441)
. ..++.+|.++..+.-
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 0 112478999987753
No 455
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=74.48 E-value=3.7 Score=37.69 Aligned_cols=78 Identities=12% Similarity=0.120 Sum_probs=51.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.+. ..+.++..|..+...-. ..++.
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 7 GKVAL-VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56677 45567888888877653 34689999999887776554432 24778888887643110 01236
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+...
T Consensus 82 iD~lv~~Ag~~ 92 (260)
T 1nff_A 82 LHVLVNNAGIL 92 (260)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877643
No 456
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=74.33 E-value=3.9 Score=39.78 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=38.1
Q ss_pred hCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 237 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
.++++|++||-.|+|+ |..+.+++..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 243 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAK----ALGATD 243 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCcE
Confidence 4678999999998754 44556666664 3348999999999888764 478753
No 457
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=74.30 E-value=8.9 Score=35.52 Aligned_cols=78 Identities=10% Similarity=0.154 Sum_probs=52.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.+ +. .+.++..|..+...-. ..++.
T Consensus 29 gk~vl-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAI-VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GC-GAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEE-ETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CS-SCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 66677 55667888888877653 3468999999998877665544 43 5678888887643110 11246
Q ss_pred ccEEEEcCCCC
Q 013515 314 VRAILLDPSCS 324 (441)
Q Consensus 314 fD~Il~DpPCS 324 (441)
+|.++..+.-.
T Consensus 104 iD~lvnnAg~~ 114 (277)
T 3gvc_A 104 VDKLVANAGVV 114 (277)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876543
No 458
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=74.03 E-value=5.2 Score=36.62 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~-D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||= ..|+||.+.+++..+. ...+|+.+ +.+.+..+.+.+.++..|. ++.++..|..+...-. ..+
T Consensus 7 ~~k~vlV-TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVV-AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEE-ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3667774 4556778888877653 33577777 7778888887777777664 5678888987643110 112
Q ss_pred CCccEEEEcCC
Q 013515 312 SEVRAILLDPS 322 (441)
Q Consensus 312 ~~fD~Il~DpP 322 (441)
+.+|.++..+-
T Consensus 85 g~id~lv~nAg 95 (259)
T 3edm_A 85 GEIHGLVHVAG 95 (259)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899998764
No 459
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=73.95 E-value=8.5 Score=36.76 Aligned_cols=50 Identities=30% Similarity=0.316 Sum_probs=37.8
Q ss_pred hCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCC
Q 013515 237 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 292 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~ 292 (441)
.++++|++||-.|+|+ |..+.+++... + .+|+++|.++++++.++ .+|.+
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~-G-a~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAM-G-LNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHT-T-CEEEEECSCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHH----HCCCC
Confidence 4788999999999854 55556666654 3 59999999999988764 46765
No 460
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=73.90 E-value=4.3 Score=37.74 Aligned_cols=83 Identities=11% Similarity=0.108 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+||= ..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|..+...-. ..++
T Consensus 31 ~gk~~lV-TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALI-TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEE-eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3667774 4556788888877653 346899999999999988888887764 5678888987654210 1124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+--+.
T Consensus 109 ~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 109 GIDIAVCNAGIVS 121 (276)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998775443
No 461
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=73.77 E-value=4.9 Score=38.96 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=38.8
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||=.|+|+ |..+.+++...+ .+|+++|.++++++.++ .+|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCCE
Confidence 34578999999998765 555666666643 48999999999988764 468754
No 462
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=73.60 E-value=4.3 Score=39.24 Aligned_cols=51 Identities=16% Similarity=0.078 Sum_probs=38.2
Q ss_pred hCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 237 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 237 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
+++++|++||-.|+|+ |..+.+++..++ .+|+++|.++++++.+++ +|.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCE
Confidence 5788999999999854 445666666653 479999999998887654 67654
No 463
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=73.34 E-value=3.4 Score=40.40 Aligned_cols=78 Identities=8% Similarity=0.037 Sum_probs=46.9
Q ss_pred CCEEEEEcCCCchHHHHHHHH---------------hcCCcEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAAL---------------MKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLD 305 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~---------------~~~~~~V~a~D~~~~rl~~l~~~~~~~g~-~~v~~~~~D~~~~~ 305 (441)
.-+|+|+||++|.-|+.+... -.+...|+.+|+-......+-+.+....- .+..++.+....+-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999988865443 12357899999977777666555432110 02235555544432
Q ss_pred CCCCCCCCccEEEE
Q 013515 306 PKDPAYSEVRAILL 319 (441)
Q Consensus 306 ~~~~~~~~fD~Il~ 319 (441)
...-..+++|.|+.
T Consensus 132 ~rlfp~~S~d~v~S 145 (359)
T 1m6e_X 132 GRLFPRNTLHFIHS 145 (359)
T ss_dssp SCCSCTTCBSCEEE
T ss_pred hccCCCCceEEEEe
Confidence 11111268899864
No 464
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=73.33 E-value=9.5 Score=35.35 Aligned_cols=83 Identities=7% Similarity=0.074 Sum_probs=56.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+||=.| |+||.+.+++..+. ...+|+.+|. +++.++.+.+.++...-..+.++..|..+...-. ..++
T Consensus 25 ~k~~lVTG-as~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 25 TKTAVITG-STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TCEEEEET-CSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 56777555 56778888877653 3458999998 6778887777776653356888889987643110 1235
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+.-+.
T Consensus 104 ~iD~lv~nAg~~~ 116 (281)
T 3v2h_A 104 GADILVNNAGVQF 116 (281)
T ss_dssp SCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899998776443
No 465
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=73.26 E-value=13 Score=34.68 Aligned_cols=80 Identities=19% Similarity=0.132 Sum_probs=55.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||= ..|+|+.+..++..+. ...+|++++.+++.++.+.+.++..|. ++.++.+|+.+...-. ..++.
T Consensus 34 ~k~vlV-TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (291)
T 3cxt_A 34 GKIALV-TGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDEDGIQAMVAQIESEVGI 111 (291)
T ss_dssp TCEEEE-ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 667774 4567888888887653 346899999999988887777776663 5677888887643110 11356
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+-.
T Consensus 112 iD~lvnnAg~ 121 (291)
T 3cxt_A 112 IDILVNNAGI 121 (291)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCc
Confidence 8999987753
No 466
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=73.06 E-value=2.9 Score=38.93 Aligned_cols=122 Identities=15% Similarity=0.124 Sum_probs=76.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHh------cCCcEEEEEe-----CCH----------------------HHHHH---HHHH
Q 013515 242 GWKVLDACSAPGNKTVHLAALM------KGKGKIVACE-----LNK----------------------ERVRR---LKDT 285 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~------~~~~~V~a~D-----~~~----------------------~rl~~---l~~~ 285 (441)
.+.|+++|+.-|+.+..++.+. +...+|+++| ..+ +.++. ..++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 4489999999999999877642 2357999999 221 11222 1222
Q ss_pred HHHhCC--CcEEEEeccCCCCCCCC---CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHH
Q 013515 286 IKLSGA--ANIEVLHGDFLNLDPKD---PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAF 360 (441)
Q Consensus 286 ~~~~g~--~~v~~~~~D~~~~~~~~---~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~ 360 (441)
.+++|. ++|+++.|++.+..+.. ....+||.|.+|.-. ...
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~--------------------------------- 195 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEP--------------------------------- 195 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHH---------------------------------
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cch---------------------------------
Confidence 335665 68999999997654321 112469999999851 111
Q ss_pred HHHHHHHHhCCCC-CcEEEEEcCC--CCChhcHHHHHHHhc
Q 013515 361 QKKALRHALSFPG-VERVVYSTCS--IHQVENEDVIKSVLP 398 (441)
Q Consensus 361 Q~~lL~~a~~~~~-~G~lvYsTCS--~~~~ENe~vV~~~l~ 398 (441)
....++.++.++. ||.||.--.. ..+.+. ..|.+|+.
T Consensus 196 t~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~-~A~~ef~~ 235 (257)
T 3tos_A 196 TKAVLEAIRPYLTKGSIVAFDELDNPKWPGEN-IAMRKVLG 235 (257)
T ss_dssp HHHHHHHHGGGEEEEEEEEESSTTCTTCTHHH-HHHHHHTC
T ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCChHHH-HHHHHHHh
Confidence 1345667777765 7788876643 245544 44577874
No 467
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=72.79 E-value=14 Score=33.92 Aligned_cols=82 Identities=10% Similarity=0.118 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.|.+||=.| |+||.+..++..+. ...+|+.++. +.++++.+.+.++..|. ++.++.+|..+...-. ..+
T Consensus 30 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTG-GSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 366777555 56778888877653 3357877755 46778888888877774 5778889987643110 112
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+...
T Consensus 108 g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 108 GGLDILVNSAGIW 120 (271)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 4789999877543
No 468
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=72.53 E-value=3.2 Score=40.51 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=39.5
Q ss_pred HhCCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 236 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 236 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
..++++|++||=.|+|+ |..+++++..++ ..+|+++|.++++++.++ ++|.+.
T Consensus 188 ~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 241 (378)
T 3uko_A 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNE 241 (378)
T ss_dssp TTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcE
Confidence 35678999999998764 555666676653 358999999999988664 578754
No 469
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=72.14 E-value=5.8 Score=36.17 Aligned_cols=83 Identities=11% Similarity=0.060 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCC-CchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CC
Q 013515 240 KPGWKVLDACSA-PGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PA 310 (441)
Q Consensus 240 ~~g~~VLDl~ag-~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~ 310 (441)
..+.+||=.|++ +|+.+.+++..+. ...+|+.++.+....+.+++..+..+ .+.++..|+.+...-. ..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 357788877763 4888888877653 34689999998666666666555554 3677888887644210 11
Q ss_pred CCCccEEEEcCCCC
Q 013515 311 YSEVRAILLDPSCS 324 (441)
Q Consensus 311 ~~~fD~Il~DpPCS 324 (441)
++.+|.++..+--.
T Consensus 90 ~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 90 WDSLDGLVHSIGFA 103 (271)
T ss_dssp CSCEEEEEECCCCC
T ss_pred cCCCCEEEECCccC
Confidence 35789999877543
No 470
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=71.90 E-value=13 Score=33.13 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC---CCCCCCccE
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---DPAYSEVRA 316 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~~fD~ 316 (441)
.|.+|| +..|+|+.+.++++.+. ...+|++++.+++.++.+.+.+ .++.++..|..+...- ...++.+|.
T Consensus 6 ~~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 6 AGRRVL-VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred CCcEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 366777 55567888988887653 3468999999988776554432 1345667887764310 012356899
Q ss_pred EEEcCC
Q 013515 317 ILLDPS 322 (441)
Q Consensus 317 Il~DpP 322 (441)
|+..+-
T Consensus 80 vi~~Ag 85 (244)
T 3d3w_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998664
No 471
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.90 E-value=7.4 Score=35.29 Aligned_cols=80 Identities=13% Similarity=0.154 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.+.. ++..+..|..+...-. ..++
T Consensus 8 ~gk~~l-VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVAL-VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 356666 55567888888887653 346899999999888777665532 4667788887643110 1124
Q ss_pred CccEEEEcCCCCC
Q 013515 313 EVRAILLDPSCSG 325 (441)
Q Consensus 313 ~fD~Il~DpPCSg 325 (441)
.+|.++..+--..
T Consensus 83 ~iD~lv~nAg~~~ 95 (248)
T 3op4_A 83 GVDILVNNAGITR 95 (248)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7899999775443
No 472
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=71.89 E-value=6.2 Score=35.64 Aligned_cols=123 Identities=11% Similarity=0.066 Sum_probs=72.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC---------
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP--------- 309 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~-D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~--------- 309 (441)
.|.+|| +..|+|+.+.+++..+.. ..+|+.+ +.+.+.++...+.+...+. ++.++..|..+......
T Consensus 6 ~~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 6 KGKVAL-VTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 356677 555678888888876643 3466664 6677778877777777663 67788888876431100
Q ss_pred ----CCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHH----HHHHHHHHHHHHHhCCCC-CcEEEEE
Q 013515 310 ----AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLN----KLSAFQKKALRHALSFPG-VERVVYS 380 (441)
Q Consensus 310 ----~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~----~l~~~Q~~lL~~a~~~~~-~G~lvYs 380 (441)
....+|.++..+.-...+.+. ..+.+++. ....-...+++.++..++ +|.+|+.
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~-----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~i 146 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIE-----------------ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINI 146 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGG-----------------GCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred cccccCCcccEEEECCCCCCCCChh-----------------hCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEe
Confidence 012489999877543222110 01233333 233345566777776654 5777776
Q ss_pred cC
Q 013515 381 TC 382 (441)
Q Consensus 381 TC 382 (441)
+.
T Consensus 147 sS 148 (255)
T 3icc_A 147 SS 148 (255)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 473
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=71.68 E-value=13 Score=34.45 Aligned_cols=122 Identities=9% Similarity=0.096 Sum_probs=74.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEeCCHH-------HHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-----
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKE-------RVRRLKDTIKLSGAANIEVLHGDFLNLDPKD----- 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D~~~~-------rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~----- 308 (441)
|.+||=.| |+|+.+..++..+.. ..+|+.++.+.. .++.+.+.++..|. ++.++..|..+...-.
T Consensus 9 ~k~vlVTG-as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 9 GKTMFISG-GSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHH
Confidence 56777444 567788888876643 458999999876 46666666676664 6888889988643110
Q ss_pred --CCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHH----HHHHHHHHHHHHHhCCCC---CcEEEE
Q 013515 309 --PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLN----KLSAFQKKALRHALSFPG---VERVVY 379 (441)
Q Consensus 309 --~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~----~l~~~Q~~lL~~a~~~~~---~G~lvY 379 (441)
..++.+|.++..+.-...+.+. ..+.++.. ....-...+.+.++..++ +|.+|+
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~-----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~ 149 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIE-----------------EVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILT 149 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTT-----------------TSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEE
T ss_pred HHHHcCCCCEEEECCCCCCCCCcc-----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 1124789999877543322111 11334333 233444556677766542 477877
Q ss_pred EcC
Q 013515 380 STC 382 (441)
Q Consensus 380 sTC 382 (441)
.+-
T Consensus 150 isS 152 (285)
T 3sc4_A 150 LSP 152 (285)
T ss_dssp CCC
T ss_pred ECC
Confidence 654
No 474
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=71.68 E-value=16 Score=34.73 Aligned_cols=105 Identities=12% Similarity=0.024 Sum_probs=58.0
Q ss_pred CEEEEEcCCCchHHHHHHHHhcCCc--EEEEEeCCH---HHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccE
Q 013515 243 WKVLDACSAPGNKTVHLAALMKGKG--KIVACELNK---ERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRA 316 (441)
Q Consensus 243 ~~VLDl~ag~G~kt~~la~~~~~~~--~V~a~D~~~---~rl~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~ 316 (441)
.+|-=+| .|..+..++..+...| .|+++|.++ ++.+...+.+...|+ .. +..+. ....|+
T Consensus 25 m~IgvIG--~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~------~~~s~~e~------~~~aDv 90 (317)
T 4ezb_A 25 TTIAFIG--FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV------EPLDDVAG------IACADV 90 (317)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC------EEESSGGG------GGGCSE
T ss_pred CeEEEEC--ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC------CCCCHHHH------HhcCCE
Confidence 3565555 5666666766654444 899999997 233333334444564 12 22221 134689
Q ss_pred EEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCChhcHHHHHHH
Q 013515 317 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 396 (441)
Q Consensus 317 Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G~lvYsTCS~~~~ENe~vV~~~ 396 (441)
|++=.|-. ... +.+......++.|.+|-.++|+.|...+.+.+.+
T Consensus 91 Vi~avp~~---------------------------~~~--------~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l 135 (317)
T 4ezb_A 91 VLSLVVGA---------------------------ATK--------AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAI 135 (317)
T ss_dssp EEECCCGG---------------------------GHH--------HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHH
T ss_pred EEEecCCH---------------------------HHH--------HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHH
Confidence 99866621 001 1123344455656666666788877776665543
No 475
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=71.12 E-value=12 Score=34.54 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=54.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCH-HHHHHHHHHHH-HhCCCcEEEEeccCCC----CCCCC------
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNK-ERVRRLKDTIK-LSGAANIEVLHGDFLN----LDPKD------ 308 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~-~rl~~l~~~~~-~~g~~~v~~~~~D~~~----~~~~~------ 308 (441)
|.+|| +..|+|+.+..++..+. ...+|+.++.++ +.++.+.+.+. ..| .++.++.+|+.+ ...-.
T Consensus 23 ~k~~l-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 23 APAAV-VTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC-CceEEEEeecCCccCCHHHHHHHHHHH
Confidence 55666 55667888888877653 236899999998 88877777665 445 467888899887 22100
Q ss_pred -CCCCCccEEEEcCCC
Q 013515 309 -PAYSEVRAILLDPSC 323 (441)
Q Consensus 309 -~~~~~fD~Il~DpPC 323 (441)
..++.+|.++..+..
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 012468999987754
No 476
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=70.79 E-value=4 Score=37.33 Aligned_cols=77 Identities=9% Similarity=0.094 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||= ..|+|+.+.+++..+. ...+|+++|.+++.++.+.+.+. .++.++..|..+...-. ..++.
T Consensus 12 ~k~vlV-TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 12 GRKAIV-TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEE-eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 667774 4567888888887653 34689999999877765543321 14567788887643110 01236
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+..
T Consensus 87 iD~lv~~Ag~ 96 (263)
T 3ak4_A 87 FDLLCANAGV 96 (263)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987654
No 477
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=70.70 E-value=7 Score=37.91 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHH-----------------HHHHHHHHHhCCCcEEEEeccC
Q 013515 240 KPGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERV-----------------RRLKDTIKLSGAANIEVLHGDF 301 (441)
Q Consensus 240 ~~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl-----------------~~l~~~~~~~g~~~v~~~~~D~ 301 (441)
..+.+|| +..|+|..+.+++..+. ...+|+++|...... +.+.+.....+ .++.++.+|.
T Consensus 9 ~~~~~vl-VTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~~Dl 86 (404)
T 1i24_A 9 HHGSRVM-VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG-KSIELYVGDI 86 (404)
T ss_dssp ---CEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC-CCCEEEESCT
T ss_pred cCCCeEE-EeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC-CceEEEECCC
Confidence 3477888 66778999999987653 335899999875432 12222212223 4678888998
Q ss_pred CCCCCCCCCCC--CccEEEEcCCC
Q 013515 302 LNLDPKDPAYS--EVRAILLDPSC 323 (441)
Q Consensus 302 ~~~~~~~~~~~--~fD~Il~DpPC 323 (441)
.+...-..... .+|.|+.-+..
T Consensus 87 ~d~~~~~~~~~~~~~D~Vih~A~~ 110 (404)
T 1i24_A 87 CDFEFLAESFKSFEPDSVVHFGEQ 110 (404)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSC
T ss_pred CCHHHHHHHHhccCCCEEEECCCC
Confidence 76431100012 38999986653
No 478
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=70.44 E-value=5.7 Score=36.02 Aligned_cols=82 Identities=12% Similarity=0.121 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEEe-CCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVACE-LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~D-~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
++.+|| +..|+|+.+.+++..+.. ..+|+.++ .+..+.....+.++..+. ++.++..|..+...-. ..+
T Consensus 12 ~~k~vl-ITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 12 SQRIAY-VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGF-DFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp -CEEEE-ETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-eeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 355666 666788888888876643 35788777 555666666666666664 5778888887643110 113
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+.-.
T Consensus 90 g~id~lv~~Ag~~ 102 (256)
T 3ezl_A 90 GEIDVLVNNAGIT 102 (256)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 5789999877644
No 479
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=70.40 E-value=5.6 Score=36.71 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=52.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.+.+.++.+.+ ..+ .++.++..|..+...-. ..++.
T Consensus 5 ~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 5 AKVWL-VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA---AYP-DRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH---HCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CcEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcc-CCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 45566 67778999999887653 34689999999877665543 333 36888889987643210 01246
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.|+..+.-
T Consensus 80 id~lv~~Ag~ 89 (281)
T 3m1a_A 80 VDVLVNNAGR 89 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987654
No 480
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=70.31 E-value=6.5 Score=36.41 Aligned_cols=79 Identities=9% Similarity=0.134 Sum_probs=53.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+||=. .|+|+.+..++..+. ...+|+.+|.+++.++.+.+.+...| ++.++..|..+...-. ..++.
T Consensus 29 ~k~vlVT-Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 29 GRIALVT-GGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TCEEEEE-TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEe-CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5677744 557888888887653 34689999999988877766665444 5778888887643110 11346
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+.-
T Consensus 106 iD~lvnnAg~ 115 (276)
T 2b4q_A 106 LDILVNNAGT 115 (276)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 481
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=70.14 E-value=7.8 Score=35.08 Aligned_cols=77 Identities=8% Similarity=0.084 Sum_probs=50.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCH-HHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNK-ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~-~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
|.+||= ..|+|+.+.+++..+. ...+|+.+|.++ +.++. .++..| .++.++..|..+...-. ..++
T Consensus 7 ~k~vlV-TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVI-TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEE-eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 566774 4567888888887653 335899999987 66554 344455 36778888987643110 0124
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+.-
T Consensus 82 ~id~lv~nAg~ 92 (249)
T 2ew8_A 82 RCDILVNNAGI 92 (249)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987754
No 482
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=70.14 E-value=12 Score=34.09 Aligned_cols=81 Identities=14% Similarity=0.197 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.++.+++.++.+.+.++..|. ++.++..|..+...-. ..++
T Consensus 6 ~~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCL-VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 356777 55567888888887653 335899999999988887777766553 5778888987643110 1124
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+..
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987754
No 483
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=69.99 E-value=16 Score=33.47 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcC-CcEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 311 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~-~~~V~a~-D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 311 (441)
.+.+|| +..|+|+.+..++..+.. ..+|+.+ +.+.+.++.+.+.++..+ .++.++..|..+...-. ..+
T Consensus 25 ~~k~vl-ITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 25 DTPVVL-VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-GEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp CSCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 355666 666788889988876633 3467555 778888888888887776 36888889987643110 112
Q ss_pred CCccEEEEcCCCC
Q 013515 312 SEVRAILLDPSCS 324 (441)
Q Consensus 312 ~~fD~Il~DpPCS 324 (441)
+.+|.++..+-..
T Consensus 103 g~id~li~nAg~~ 115 (272)
T 4e3z_A 103 GRLDGLVNNAGIV 115 (272)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 4689999877543
No 484
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=69.82 E-value=8.6 Score=34.90 Aligned_cols=78 Identities=12% Similarity=0.160 Sum_probs=49.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.+++..+. ...+|+.++.+++ +...+.+...|. ++.++..|..+...-. ..++.
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 4 GKTAL-VTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGV-KAVHHPADLSDVAQIEALFALAEREFGG 79 (255)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSC-CEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCC-ceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 55666 56677889999887663 3358999998765 333344444443 5777888887643110 01236
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.++..+.-
T Consensus 80 id~lv~~Ag~ 89 (255)
T 2q2v_A 80 VDILVNNAGI 89 (255)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987654
No 485
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=69.76 E-value=5 Score=37.56 Aligned_cols=78 Identities=13% Similarity=0.076 Sum_probs=43.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-CHHHHHHHHHHHHHhC--CCcEEEEeccCCCCCCCCCCCCCccEE
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSG--AANIEVLHGDFLNLDPKDPAYSEVRAI 317 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-~~~rl~~l~~~~~~~g--~~~v~~~~~D~~~~~~~~~~~~~fD~I 317 (441)
|.+|| +..|+|+.+.++++.+. ...+|++++. ++.....+.. +..+. ..++.++.+|..+...-...+..+|.|
T Consensus 1 ~k~vl-VTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 78 (322)
T 2p4h_X 1 KGRVC-VTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSF-LTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGI 78 (322)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHH-HHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEE
T ss_pred CCEEE-EECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHH-HHhhhccCCceEEEecCCCCHHHHHHHHcCCCEE
Confidence 34666 66689999999987653 3358888877 5532111111 11111 025778888887643211112457999
Q ss_pred EEcC
Q 013515 318 LLDP 321 (441)
Q Consensus 318 l~Dp 321 (441)
+.-+
T Consensus 79 ih~A 82 (322)
T 2p4h_X 79 FHTA 82 (322)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8876
No 486
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=69.54 E-value=7.3 Score=35.28 Aligned_cols=78 Identities=9% Similarity=0.140 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
|.+|| +..|+|+.+.++++.+. ...+|+.+|.+++.++.+.+. ..++.++.+|..+...-. ..++.
T Consensus 2 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 2 NRGVI-VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-----RPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-----CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----cccCCeEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 34566 45567788888887653 346899999998877655432 245678888987643110 11247
Q ss_pred ccEEEEcCCCCC
Q 013515 314 VRAILLDPSCSG 325 (441)
Q Consensus 314 fD~Il~DpPCSg 325 (441)
+|.++..+.-+.
T Consensus 76 id~lv~nAg~~~ 87 (247)
T 3dii_A 76 IDVLVNNACRGS 87 (247)
T ss_dssp CCEEEECCC-CC
T ss_pred CCEEEECCCCCC
Confidence 899998775443
No 487
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=69.34 E-value=8.8 Score=35.67 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.+..||=.| |+||.+..++..+. ...+|+.+|.+.+.++.+.+.+...|. .+.++..|..+...-. ..++
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITG-AGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 366777544 56778888877653 346899999999998888887766553 5778889987643110 1134
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+--.
T Consensus 105 ~iD~lVnnAg~~ 116 (283)
T 3v8b_A 105 HLDIVVANAGIN 116 (283)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999877643
No 488
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=69.28 E-value=18 Score=33.10 Aligned_cols=82 Identities=13% Similarity=0.148 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeC-------------CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-------------NKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 306 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~-------------~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~ 306 (441)
.|.+||= ..|+||.+.+++..+. ...+|+.+|. +.+.++.+.+.++..+. .+.++..|..+...
T Consensus 10 ~~k~~lV-TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFI-TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEE-ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 3667774 4556778888877653 3468999998 77888887777777664 57888889876441
Q ss_pred CC-------CCCCCccEEEEcCCCC
Q 013515 307 KD-------PAYSEVRAILLDPSCS 324 (441)
Q Consensus 307 ~~-------~~~~~fD~Il~DpPCS 324 (441)
-. ..++.+|.++.++--.
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 10 1125689999877543
No 489
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=68.90 E-value=15 Score=34.21 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~------------~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 307 (441)
.|.+||=.| |+||.+..++..+. ...+|+.+|.+ ++.++.+.+.++..|. ++.++..|+.+...-
T Consensus 27 ~gk~~lVTG-as~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITG-AARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH
Confidence 366777554 56778888877653 34689999987 7888888777877774 688889998864421
Q ss_pred C-------CCCCCccEEEEcCCC
Q 013515 308 D-------PAYSEVRAILLDPSC 323 (441)
Q Consensus 308 ~-------~~~~~fD~Il~DpPC 323 (441)
. ..++..|.++.++--
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCC
Confidence 0 113478999987653
No 490
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=68.86 E-value=15 Score=32.53 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 313 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 313 (441)
+.+|| +..|+|+.+.+++..+. ...+|++++.++..++.+.+.+ + ++.++.+|..+...-. ..++.
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---E--GALPLPGDVREEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---h--hceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 44566 66778999999887663 3358999999988776654432 2 5677888887643110 01246
Q ss_pred ccEEEEcCCC
Q 013515 314 VRAILLDPSC 323 (441)
Q Consensus 314 fD~Il~DpPC 323 (441)
+|.|+..+..
T Consensus 79 id~li~~Ag~ 88 (234)
T 2ehd_A 79 LSALVNNAGV 88 (234)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 7999987653
No 491
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=68.78 E-value=9.6 Score=35.03 Aligned_cols=79 Identities=10% Similarity=0.173 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+ ..|. ++.++..|..+...-. ..++
T Consensus 26 ~gk~vl-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKAL-VTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA---DLGK-DVFVFSANLSDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCS-SEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCC-ceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 366777 55667888888887653 34689999999888776643 3453 5788889987644210 1124
Q ss_pred CccEEEEcCCCC
Q 013515 313 EVRAILLDPSCS 324 (441)
Q Consensus 313 ~fD~Il~DpPCS 324 (441)
.+|.++..+.-.
T Consensus 101 ~iD~lvnnAg~~ 112 (266)
T 3grp_A 101 GIDILVNNAGIT 112 (266)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999877543
No 492
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=68.29 E-value=16 Score=33.73 Aligned_cols=82 Identities=9% Similarity=0.051 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 312 (441)
.|.+|| +..|+|+.+.+++..+. ...+|+.+|.+++.++.+.+.+...+-..+.++..|+.+...-. ..++
T Consensus 32 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIAL-VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 366677 56667888988887663 34689999999999988888877665555688889987654210 1135
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
.+|.++..+--
T Consensus 111 ~iD~lvnnAG~ 121 (281)
T 4dry_A 111 RLDLLVNNAGS 121 (281)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987753
No 493
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=68.28 E-value=7.6 Score=38.17 Aligned_cols=51 Identities=25% Similarity=0.304 Sum_probs=37.3
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 013515 238 APKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 293 (441)
Q Consensus 238 ~~~~g~~VLDl~ag~-G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~ 293 (441)
++++|++||=.|+|+ |..+.+++..+ +..+|+++|.++++++.++ .+|.+.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 578999999988754 44455566654 3358999999999988774 468653
No 494
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=68.10 E-value=14 Score=34.13 Aligned_cols=82 Identities=15% Similarity=0.144 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCC----------------HHHHHHHHHHHHHhCCCcEEEEeccCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN----------------KERVRRLKDTIKLSGAANIEVLHGDFLN 303 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~----------------~~rl~~l~~~~~~~g~~~v~~~~~D~~~ 303 (441)
.|.+||= ..|+|+.+.+++..+. ...+|+.+|.+ .+.++.+.+.++..|. ++.++..|..+
T Consensus 10 ~~k~~lV-TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFV-TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEE-ESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCEEEE-eCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCC
Confidence 3667774 4556778888877653 34689999987 7788877777766663 68888899876
Q ss_pred CCCCC-------CCCCCccEEEEcCCCC
Q 013515 304 LDPKD-------PAYSEVRAILLDPSCS 324 (441)
Q Consensus 304 ~~~~~-------~~~~~fD~Il~DpPCS 324 (441)
...-. ..++.+|.++..+-..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 43210 1124789999877543
No 495
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=67.95 E-value=16 Score=34.04 Aligned_cols=78 Identities=8% Similarity=0.035 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhc-CCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 312 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~-~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 312 (441)
.|..+|=.|+ ++|.+..++..+. ...+|+.+|.+++.++.+.+ .+|- ++..+.+|..+...- ...++
T Consensus 28 ~gKvalVTGa-s~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~---~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGA-TSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGG-GAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHCT-TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCc-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCC-CeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3777775555 5667877777653 34699999999988776644 4454 456778888764421 11246
Q ss_pred CccEEEEcCCC
Q 013515 313 EVRAILLDPSC 323 (441)
Q Consensus 313 ~fD~Il~DpPC 323 (441)
..|.++.++--
T Consensus 103 ~iDiLVNNAG~ 113 (273)
T 4fgs_A 103 RIDVLFVNAGG 113 (273)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999987753
No 496
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=67.78 E-value=55 Score=32.55 Aligned_cols=120 Identities=13% Similarity=0.206 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHhcCC-cEEEEEeCCHHHHHHHHHH------------HHHh-CCCcEEEEeccCCCCCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDT------------IKLS-GAANIEVLHGDFLNLDPK 307 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~~~-~~V~a~D~~~~rl~~l~~~------------~~~~-g~~~v~~~~~D~~~~~~~ 307 (441)
|.+.-=+|. |+.++.+|..+... -.|+++|+++++++.+++. +++. .-.++.+.. |.
T Consensus 11 ~~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d~------ 81 (431)
T 3ojo_A 11 GSKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-TP------ 81 (431)
T ss_dssp -CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-SC------
T ss_pred CCccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-ch------
Confidence 444444455 55555555554333 5899999999999988652 1110 012344332 31
Q ss_pred CCCCCCccEEEEcCCCCCCcccccccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCc-EEEEEcCCCCC
Q 013515 308 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQ 386 (441)
Q Consensus 308 ~~~~~~fD~Il~DpPCSg~G~~~~~pd~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~a~~~~~~G-~lvYsTCS~~~ 386 (441)
...|+|++-.|-....--.+.||. +.+. ...+.....++.| .+|+. .|+.|
T Consensus 82 ----~~aDvvii~VpTp~~~~~~~~~Dl----------------~~V~-------~~~~~i~~~l~~g~iVV~~-STV~p 133 (431)
T 3ojo_A 82 ----EASDVFIIAVPTPNNDDQYRSCDI----------------SLVM-------RALDSILPFLKKGNTIIVE-STIAP 133 (431)
T ss_dssp ----CCCSEEEECCCCCBCSSSSCBBCC----------------HHHH-------HHHHHHGGGCCTTEEEEEC-SCCCT
T ss_pred ----hhCCEEEEEeCCCccccccCCccH----------------HHHH-------HHHHHHHHhCCCCCEEEEe-cCCCh
Confidence 235899997774321000023443 1111 1123344445655 55554 48899
Q ss_pred hhcHHHHHHHhc
Q 013515 387 VENEDVIKSVLP 398 (441)
Q Consensus 387 ~ENe~vV~~~l~ 398 (441)
.-.+.+.+.+++
T Consensus 134 gtt~~v~~~i~e 145 (431)
T 3ojo_A 134 KTMDDFVKPVIE 145 (431)
T ss_dssp THHHHTHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 989988888775
No 497
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=67.52 E-value=15 Score=37.47 Aligned_cols=87 Identities=15% Similarity=0.146 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHhcCCc--EEEEEeCCHH---HHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC--
Q 013515 239 PKPGWKVLDACSAPGNKTVHLAALMKGKG--KIVACELNKE---RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY-- 311 (441)
Q Consensus 239 ~~~g~~VLDl~ag~G~kt~~la~~~~~~~--~V~a~D~~~~---rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~-- 311 (441)
..++.+|| +..|+|+.+.++++.+...| +|+.++.+.. .++.+.+.++..|. ++.++.+|+.+...-..-.
T Consensus 256 ~~~~~~vL-ITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~ 333 (511)
T 2z5l_A 256 WQPSGTVL-ITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC-EVVHAACDVAERDALAALVTA 333 (511)
T ss_dssp CCCCSEEE-EETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC-EEEEEECCSSCHHHHHHHHHH
T ss_pred cCCCCEEE-EECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHhc
Confidence 35677888 55578999999988764333 6888888753 34555555665664 6888889987643110000
Q ss_pred CCccEEEEcCCCCCCc
Q 013515 312 SEVRAILLDPSCSGSG 327 (441)
Q Consensus 312 ~~fD~Il~DpPCSg~G 327 (441)
..+|.|+..+.....+
T Consensus 334 ~~ld~VVh~AGv~~~~ 349 (511)
T 2z5l_A 334 YPPNAVFHTAGILDDA 349 (511)
T ss_dssp SCCSEEEECCCCCCCB
T ss_pred CCCcEEEECCcccCCc
Confidence 3579999876544333
No 498
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=67.10 E-value=12 Score=36.25 Aligned_cols=81 Identities=15% Similarity=0.150 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHhc--CCcEEEEEeCCHHH---------HHHHHHHHHHhCC----Cc---EEEEeccCCC
Q 013515 242 GWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKER---------VRRLKDTIKLSGA----AN---IEVLHGDFLN 303 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~~~--~~~~V~a~D~~~~r---------l~~l~~~~~~~g~----~~---v~~~~~D~~~ 303 (441)
+++|| +..|+|+.+.+++..+. ...+|++++.+... .+.+.+.++...- .+ +.++.+|+.+
T Consensus 2 ~m~vl-VTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 2 HMRVL-VCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 34676 45578999999887654 34689999986433 3444333444321 13 7888899876
Q ss_pred CCCCC---CCCCCccEEEEcCCC
Q 013515 304 LDPKD---PAYSEVRAILLDPSC 323 (441)
Q Consensus 304 ~~~~~---~~~~~fD~Il~DpPC 323 (441)
...-. ..++.+|.|+..+..
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~ 103 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAF 103 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 43110 001238999986654
No 499
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=66.51 E-value=13 Score=36.48 Aligned_cols=21 Identities=24% Similarity=0.474 Sum_probs=18.0
Q ss_pred CCEEEEEcCCCchHHHHHHHH
Q 013515 242 GWKVLDACSAPGNKTVHLAAL 262 (441)
Q Consensus 242 g~~VLDl~ag~G~kt~~la~~ 262 (441)
+.+|+|+|||+|.-|+.+...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHHHH
Confidence 578999999999999987443
No 500
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=66.26 E-value=11 Score=29.86 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHhcCCcEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEc
Q 013515 241 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 320 (441)
Q Consensus 241 ~g~~VLDl~ag~G~kt~~la~~~~~~~~V~a~D~~~~rl~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il~D 320 (441)
+..+|| +||+.|..|..++..+ ++.++..|++ +.+.......+... ...+|+||+-
T Consensus 5 ~~mkIl-L~C~aGmSTsllv~km-------------------~~~a~~~gi~-v~i~a~~~~~~~~~---~~~~DvvLLg 60 (108)
T 3nbm_A 5 KELKVL-VLCAGSGTSAQLANAI-------------------NEGANLTEVR-VIANSGAYGAHYDI---MGVYDLIILA 60 (108)
T ss_dssp CCEEEE-EEESSSSHHHHHHHHH-------------------HHHHHHHTCS-EEEEEEETTSCTTT---GGGCSEEEEC
T ss_pred cCceEE-EECCCCCCHHHHHHHH-------------------HHHHHHCCCc-eEEEEcchHHHHhh---ccCCCEEEEC
Confidence 344677 6666777776666654 3335556774 55544334333322 2568999986
Q ss_pred CC
Q 013515 321 PS 322 (441)
Q Consensus 321 pP 322 (441)
|-
T Consensus 61 PQ 62 (108)
T 3nbm_A 61 PQ 62 (108)
T ss_dssp GG
T ss_pred hH
Confidence 55
Done!