Query 013516
Match_columns 441
No_of_seqs 144 out of 1066
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 12:03:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013516.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013516hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 3.5E-90 1.2E-94 715.0 22.6 357 1-410 71-431 (433)
2 1ia6_A Cellulase CEL9M; cellul 100.0 1.7E-88 5.9E-93 703.4 25.3 351 1-411 73-430 (441)
3 2xfg_A Endoglucanase 1; hydrol 100.0 2.9E-88 1E-92 704.6 26.7 363 1-411 93-463 (466)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 6.2E-88 2.1E-92 722.6 25.9 364 1-411 72-444 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 1.8E-87 6.2E-92 719.7 23.1 363 1-411 133-516 (611)
6 1g87_A Endocellulase 9G; endog 100.0 2.6E-86 8.9E-91 710.5 28.0 362 1-411 72-440 (614)
7 1clc_A Endoglucanase CELD; EC: 100.0 9.8E-77 3.3E-81 640.0 23.8 348 1-411 205-565 (639)
8 3gzk_A Cellulase; fold from GH 100.0 9E-77 3.1E-81 628.8 21.3 345 1-411 160-535 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 1.8E-75 6.1E-80 628.0 20.4 357 14-409 221-606 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 1.3E-49 4.5E-54 420.6 17.5 350 1-409 166-566 (586)
11 2gz6_A N-acetyl-D-glucosamine 96.6 0.042 1.5E-06 54.7 15.9 81 90-176 54-143 (388)
12 3k7x_A LIN0763 protein; Q92DQ0 96.3 0.014 4.8E-07 58.1 9.7 138 3-177 95-242 (349)
13 3k7x_A LIN0763 protein; Q92DQ0 95.1 0.11 3.9E-06 51.4 10.9 68 93-176 50-120 (349)
14 2gz6_A N-acetyl-D-glucosamine 95.1 0.069 2.4E-06 53.1 9.2 132 9-176 62-200 (388)
15 3gt5_A N-acetylglucosamine 2-e 93.4 0.17 5.8E-06 50.9 8.0 130 9-176 61-201 (402)
16 1fp3_A N-acyl-D-glucosamine 2- 93.3 0.41 1.4E-05 47.8 10.8 120 21-176 14-150 (402)
17 2zzr_A Unsaturated glucuronyl 93.2 0.15 5E-06 51.6 7.1 137 9-176 123-274 (397)
18 2ahf_A Unsaturated glucuronyl 92.6 0.4 1.4E-05 48.0 9.4 138 9-176 97-249 (377)
19 1nc5_A Hypothetical protein YT 92.4 2.4 8.2E-05 42.0 14.8 72 91-177 43-116 (373)
20 3gt5_A N-acetylglucosamine 2-e 92.2 0.45 1.5E-05 47.8 9.2 122 21-176 10-140 (402)
21 3k11_A Putative glycosyl hydro 88.0 3.3 0.00011 42.3 11.5 76 92-176 85-173 (445)
22 1fp3_A N-acyl-D-glucosamine 2- 87.7 1.4 4.7E-05 43.9 8.3 82 85-176 245-342 (402)
23 3k11_A Putative glycosyl hydro 87.4 1.8 6E-05 44.3 8.9 130 2-167 268-417 (445)
24 3pmm_A Putative cytoplasmic pr 80.3 48 0.0016 32.7 21.1 114 20-176 25-138 (382)
25 2zbl_A Putative isomerase; N-a 72.6 5.5 0.00019 40.0 6.5 75 90-176 52-138 (421)
26 3e6u_A LANC-like protein 1; al 70.5 21 0.00073 35.6 10.3 114 18-176 248-363 (411)
27 1nc5_A Hypothetical protein YT 67.2 5.6 0.00019 39.3 5.1 65 107-176 104-171 (373)
28 2zbl_A Putative isomerase; N-a 62.9 12 0.00039 37.6 6.6 88 84-176 244-344 (421)
29 2zzr_A Unsaturated glucuronyl 60.9 30 0.001 34.5 9.1 131 18-176 190-338 (397)
30 2g0d_A Nisin biosynthesis prot 58.6 77 0.0026 31.0 11.8 127 18-175 224-352 (409)
31 3e6u_A LANC-like protein 1; al 56.2 85 0.0029 31.1 11.6 67 92-172 78-144 (411)
32 3pmm_A Putative cytoplasmic pr 52.7 29 0.00098 34.4 7.3 92 2-129 235-332 (382)
33 2p0v_A Hypothetical protein BT 43.6 63 0.0022 33.2 8.2 93 21-129 205-319 (489)
34 1r76_A Pectate lyase; A-helica 41.0 1.3E+02 0.0044 30.1 9.8 86 18-130 169-258 (408)
35 2ahf_A Unsaturated glucuronyl 34.2 2.2E+02 0.0076 27.9 10.4 96 3-128 224-319 (377)
36 2kmg_A KLCA; ARDB, spectroscop 32.6 21 0.00072 30.5 2.2 46 86-131 87-133 (142)
37 2v8i_A Pectate lyase; periplas 31.5 26 0.0009 35.7 3.0 75 93-176 377-454 (543)
38 2fba_A Glucoamylase Glu1; (alp 31.4 96 0.0033 31.8 7.4 92 3-129 151-260 (492)
39 2wj9_A ARDB, intergenic-region 29.0 81 0.0028 27.9 5.4 41 87-131 131-172 (181)
40 1gxm_A Pectate lyase; mechanis 25.7 2.8E+02 0.0096 26.8 9.1 84 18-130 91-182 (332)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=3.5e-90 Score=715.03 Aligned_cols=357 Identities=38% Similarity=0.657 Sum_probs=319.4
Q ss_pred CcchhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCc
Q 013516 1 MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRP 80 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~ 80 (441)
||+|+++||++.|+++|++||||||||||+|||||||+++ |.||+|||++.. ||.+|++||+++++|+
T Consensus 71 ~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----g~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~ 138 (433)
T 1ks8_A 71 VLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQ----NEFYGQVGQGDA--------DHAFWGRPEDMTMARP 138 (433)
T ss_dssp HHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHCCBT----TBEEEEESCHHH--------HHTCCSCGGGCCSCCC
T ss_pred HHHHHHHHhHHhhhcCCchHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------CCcccCCHhhCCCCCc
Confidence 6899999999999999999999999999999999999998 999999999876 9999999999999999
Q ss_pred ccccC---ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHHH
Q 013516 81 VTECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWG 156 (441)
Q Consensus 81 ~~~~~---p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~wA 156 (441)
+|+++ |+|++++++|||||+|||||| +||+||++||++||++|+||++||+.|.+.++..+++|+|+++.||++||
T Consensus 139 ~y~~~~~~pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WA 218 (433)
T 1ks8_A 139 AYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWA 218 (433)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHH
T ss_pred eeeccCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHH
Confidence 99876 899999999999999999999 99999999999999999999999999887666667899999999999999
Q ss_pred HHHHHHHhCChhhHHHhccCCCCCCCCcccccCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHHHHH
Q 013516 157 GAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMC 236 (441)
Q Consensus 157 A~eLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (441)
|+|||++||+++|++++++++ ..+........|+|+++..+++++|+++. . .+.|++.++.++|
T Consensus 219 Aa~Ly~aTgd~~Yl~~~~~~~-----~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~~~~ 282 (433)
T 1ks8_A 219 AAWLYRATNDNTYLNTAESLY-----DEFGLQNWGGGLNWDSKVSGVQVLLAKLT---N--------KQAYKDTVQSYVN 282 (433)
T ss_dssp HHHHHHHHCCHHHHHHHHHHH-----HHTTGGGSCCCCCSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHH-----HhcCcCcCcCCcCccchhhHHHHHHhhcc---C--------hHHHHHHHHHHHH
Confidence 999999999999999998754 11211123457999999999999998763 1 2567888888888
Q ss_pred hhCCCCCCcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhchhccCCCC
Q 013516 237 SYLPTFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNP 316 (441)
Q Consensus 237 ~~~~~~~~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~qldYiLG~Np 316 (441)
.++. ...+||+|+.|.. +|||+++++|++|++++++++. +++.+|+++|++|||||||+|
T Consensus 283 ~~~~---~~~~tp~Gl~~~~--~WGs~~~~~n~a~l~~~~~~~~--------------~~~~~y~~~A~~qldYiLG~n- 342 (433)
T 1ks8_A 283 YLIN---NQQKTPKGLLYID--MWGTLRHAANAAFIMLEAAELG--------------LSASSYRQFAQTQIDYALGDG- 342 (433)
T ss_dssp HHHH---TSCBCTTSCBCCC--STTHHHHHHHHHHHHHHHHHTT--------------SSHHHHHHHHHHHHHHHHTTT-
T ss_pred HHHh---cCCcCCCCceeec--CCchhHHHHHHHHHHHHHHhcC--------------CCHHHHHHHHHHhHhhccCCC-
Confidence 7763 3457999999865 3599999999999999999841 368999999999999999998
Q ss_pred CCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCCCCCccccccccccccccccc
Q 013516 317 RKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAG 396 (441)
Q Consensus 317 ~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~nEvaId~ 396 (441)
++|||||||+|+|++||||.++||.. +..|. +.+.+++.||+++|+|+||||||..|+|+|+|.+|++|||||||
T Consensus 343 -~~SyvvG~G~~~p~~pHHR~s~~~~~--~~~c~--~~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~ 417 (433)
T 1ks8_A 343 -GRSFVCGFGSNPPTRPHHRSSSCPPA--PATCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDY 417 (433)
T ss_dssp -SSCCBTTSSSSCCSCCSCHHHHCCCT--TSCCS--HHHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHH
T ss_pred -CcceEeccCCCCCCCCcchhhcCCCc--ccccc--ccccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHh
Confidence 78999999999999999999999864 34674 55688899999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcC
Q 013516 397 NAGLVAALVALSGE 410 (441)
Q Consensus 397 NA~~v~~la~l~~~ 410 (441)
||+||++||+|...
T Consensus 418 NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 418 NAGFQSALAALVAL 431 (433)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999764
No 2
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=1.7e-88 Score=703.42 Aligned_cols=351 Identities=32% Similarity=0.554 Sum_probs=307.5
Q ss_pred CcchhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCc
Q 013516 1 MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRP 80 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~ 80 (441)
||+|+++||++.|+++|++||||||||||+|||||||+++ +.||+||||+.. ||.+|++||+++.+|+
T Consensus 73 ~L~w~~~e~~~~~~~~g~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~--------Dh~~w~~Pe~~~~~R~ 140 (441)
T 1ia6_A 73 ILGWSLYEFKESFDATGNTTKMLQQLKYFTDYFLKSHPNS----TTFYYQVGEGNA--------DHTYWGAPEEQTGQRP 140 (441)
T ss_dssp HHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH--------HTTCCSCGGGCCSCCC
T ss_pred HHHHHHHHhHHHHhhcCcHHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------cccccCChhhCCCCCc
Confidence 6999999999999999999999999999999999999998 999999999877 9999999999999999
Q ss_pred c-cccC---ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHH
Q 013516 81 V-TECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIW 155 (441)
Q Consensus 81 ~-~~~~---p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~w 155 (441)
+ |.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++||+.+. .+++|+|+++.||++|
T Consensus 141 ~~y~~~~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-----~~~~Y~ss~~~DE~~W 215 (441)
T 1ia6_A 141 SLYKADPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-----GQSFYQATSFGDDLAW 215 (441)
T ss_dssp CCEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-----CTTTSCCCCSHHHHHH
T ss_pred eeeEeCCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCchhHHHH
Confidence 9 8775 899999999999999999999 9999999999999999999999998532 3689999999999999
Q ss_pred HHHHHHHHhCChhhHHHhccCCCCCCCCcccc--cCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHH
Q 013516 156 GGAWLYYATGNSSYLQLATTPGLGKHAGVFWG--ILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSI 233 (441)
Q Consensus 156 AA~eLy~aTg~~~Y~~~a~~~~~~~~~~~~~~--~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (441)
||+|||++||+++|++++++++. +...... ....+.|+||++..+++++|+++. . ...|++.++.
T Consensus 216 AAa~Ly~aTgd~~Yl~~a~~~~~--~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~ 282 (441)
T 1ia6_A 216 AATWLYTATNDSTYITDAEQFIT--LGNTMNENKMQDKWTMCWDDMYVPAALRLAQIT---G--------KQIYKDAIEF 282 (441)
T ss_dssp HHHHHHHHHCCTHHHHHHHHHTT--C------CGGGCSSCSSSSCCHHHHHHHHHHHH---C--------CHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHh--hhhhcccccccCCCcCCccchHHHHHHHHHhcc---C--------cHHHHHHHHH
Confidence 99999999999999999988642 1111000 012457999999999999988863 2 1356666776
Q ss_pred HHHhhCCCCCCcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhchhccC
Q 013516 234 TMCSYLPTFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILG 313 (441)
Q Consensus 234 ~~~~~~~~~~~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~qldYiLG 313 (441)
.++.++ ..+.+||+|+.|... |||+++++|++|++++|++++ ++++|+++|++|||||||
T Consensus 283 ~~~~~~---~~~~~tp~Gl~~~~~--WGs~~~~~~~a~l~~~~~~~~---------------~~~~y~~~A~~qldYiLG 342 (441)
T 1ia6_A 283 NFNYWK---TQVTTTPGGLKWLSN--WGVLRYAAAESMVMLVYCKQN---------------PDQSLLDLAKKQVDYILG 342 (441)
T ss_dssp HHHHHH---HTSCBCTTSCBCCCS--TTHHHHHHHHHHHHHHHHHHS---------------CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHH---hhcccCCCCceecCC--cchHHHHHHHHHHHHHHHhhc---------------CHHHHHHHHHHHHHHhcC
Confidence 666554 345689999998665 499999999999999999853 578999999999999999
Q ss_pred CCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCCCCCcccccccccccccc
Q 013516 314 KNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPT 393 (441)
Q Consensus 314 ~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~nEva 393 (441)
+||+++|||||||.|+|++||||.++|+.. .+.+.+.|++++|+|+||||||..|+|+|+|.+|++||||
T Consensus 343 ~NP~~~SyvvG~G~~~p~~pHHR~s~~~~~----------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEva 412 (441)
T 1ia6_A 343 DNPANMSYIIGYGSNWCIHPHHRAANGYTY----------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVA 412 (441)
T ss_dssp CSTTCCCSBTTSSSSCCSCCBCHHHHCCCC----------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCC
T ss_pred CCCCCceeEEecCCCCCCCCcChhhccCCc----------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccc
Confidence 999999999999999999999999998642 2355788899999999999999999999999999999999
Q ss_pred cccchHHHHHHHHhhcCC
Q 013516 394 LAGNAGLVAALVALSGEK 411 (441)
Q Consensus 394 Id~NA~~v~~la~l~~~~ 411 (441)
|||||+||++||+|....
T Consensus 413 i~~NA~~v~~la~l~~~~ 430 (441)
T 1ia6_A 413 LDYNAGLVGVLAGAIKFF 430 (441)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHhc
Confidence 999999999999999865
No 3
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=2.9e-88 Score=704.61 Aligned_cols=363 Identities=33% Similarity=0.509 Sum_probs=310.3
Q ss_pred CcchhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCc
Q 013516 1 MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRP 80 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~ 80 (441)
||+|+++||++.|+++|++||||||||||+|||||||+++ +.||+|||++.. ||.+|++||+++.+|+
T Consensus 93 ~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~--------Dh~~W~~pe~~~~~R~ 160 (466)
T 2xfg_A 93 MLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEK----DVYYYQVGDGHA--------DHAWWGPAEVMPMERP 160 (466)
T ss_dssp HHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TEEEEEESCHHH--------HHTCCSCGGGCCSCCC
T ss_pred HHHHHHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc--------cccccCCcccCCCCCc
Confidence 6999999999999999999999999999999999999988 999999999876 9999999999998899
Q ss_pred ccccC---ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCC-CCcccHHHH
Q 013516 81 VTECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNS-TSYWDEFIW 155 (441)
Q Consensus 81 ~~~~~---p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~-~~~~De~~w 155 (441)
+|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++||+.|.. ...+++|+| +++.||++|
T Consensus 161 ~y~i~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~--~~~~~~Y~s~s~~~DEl~W 238 (466)
T 2xfg_A 161 SYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDGY--TAANGFYNSWSGFYDELSW 238 (466)
T ss_dssp EEEEESSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTC--CTTTTTSCCSSCSHHHHHH
T ss_pred eeEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCCC--CccccccCCCCCCchHHHH
Confidence 98775 899999999999999999999 99999999999999999999999998843 345789999 999999999
Q ss_pred HHHHHHHHhCChhhHHHhccCCCCCCC-CcccccCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHHH
Q 013516 156 GGAWLYYATGNSSYLQLATTPGLGKHA-GVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSIT 234 (441)
Q Consensus 156 AA~eLy~aTg~~~Y~~~a~~~~~~~~~-~~~~~~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (441)
||+|||+|||+++|++++++++..... .........+.|+||+|..+++++|+++. ..+ ..|++.++..
T Consensus 239 AAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~~--------~~~~~~~~~~ 308 (466)
T 2xfg_A 239 AAVWLYLATNDSSYLDKAESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--NDN--------GKYKEAIERH 308 (466)
T ss_dssp HHHHHHHHHCCHHHHHHHHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CSS--------CHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CCc--------HHHHHHHHHH
Confidence 999999999999999999986421000 00000112357999999999999998863 111 1345555556
Q ss_pred HHhhCCCC--CCcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhchhcc
Q 013516 235 MCSYLPTF--TTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYIL 312 (441)
Q Consensus 235 ~~~~~~~~--~~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~qldYiL 312 (441)
++.++.+. ..+.+||+|+.|... |||+||++|++||+++|++++ .|+ .+++++|+++|++||||||
T Consensus 309 ~~~~~~~~~~~~~~~tp~Gl~~~~~--Wgs~~~~~n~afl~~~y~~~~--------~~~--~~~~~~y~~~A~~qidYiL 376 (466)
T 2xfg_A 309 LDWWTTGYNGERITYTPKGLAWLDQ--WGSLRYATTTAFLACVYSDWE--------NGD--KEKAKTYLEFARSQADYAL 376 (466)
T ss_dssp HHHHTTCBTTBCCCBCTTSCBCCCS--SSHHHHHHHHHHHHHHHHTCT--------TSC--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCccccCCccccccCC--CCchHHHHHHHHHHHHHHHhc--------CCC--cccHHHHHHHHHHhHHhhc
Confidence 66665432 345789999998876 499999999999999999964 132 2347899999999999999
Q ss_pred CCCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCCCCCccccccccccccc
Q 013516 313 GKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEP 392 (441)
Q Consensus 313 G~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~nEv 392 (441)
|+| ++|||||||+|+|++||||.++|+.. ...+.+.|++++|+|+||||||..|+|.|+|.+|++|||
T Consensus 377 G~N--~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEv 444 (466)
T 2xfg_A 377 GST--GRSFVVGFGENPPKRPHHRTAHGSWA----------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEV 444 (466)
T ss_dssp TTT--SSCCBTTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCC
T ss_pred CCC--CcceEeccCCCCCCCCcCchhccCcc----------ccccCCCCCCCCCccceeeCCCCccCcCccccccccccc
Confidence 999 99999999999999999999998632 134567889999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHhhcCC
Q 013516 393 TLAGNAGLVAALVALSGEK 411 (441)
Q Consensus 393 aId~NA~~v~~la~l~~~~ 411 (441)
||||||+||++||+|....
T Consensus 445 aid~NA~~v~~la~l~~~~ 463 (466)
T 2xfg_A 445 ACDYNAGFVGLLAKMYKLY 463 (466)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHc
Confidence 9999999999999998653
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=6.2e-88 Score=722.60 Aligned_cols=364 Identities=35% Similarity=0.555 Sum_probs=317.8
Q ss_pred CcchhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCc
Q 013516 1 MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRP 80 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~ 80 (441)
||+|+++||++.|+++|++||||||||||+|||||||+++ +.||+||||+.. ||.+|++||+++.+|+
T Consensus 72 ~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~--------DH~~w~~pe~m~~~r~ 139 (605)
T 1tf4_A 72 MLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSP----NVLYVQVGDGDA--------DHKWWGPAEVMPMERP 139 (605)
T ss_dssp HHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TBEEEEESCHHH--------HHHCCSCGGGCCSCCC
T ss_pred HHHHHHHHhHHHHhhcCCcccHHHHHHHHHHHHHHhccCC----CeEEEEeCCCCc--------CccccCChhhCCCCCc
Confidence 6999999999999999999999999999999999999998 999999999876 9999999999999999
Q ss_pred ccccC---ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCC-CCcccHHHH
Q 013516 81 VTECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNS-TSYWDEFIW 155 (441)
Q Consensus 81 ~~~~~---p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~-~~~~De~~w 155 (441)
+|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++||+.|.++.+ .+++|+| +++.||++|
T Consensus 140 ~y~~~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~-~~~~Y~s~s~~~DEl~W 218 (605)
T 1tf4_A 140 SFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVW 218 (605)
T ss_dssp EEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST-THHHHCCSSCSHHHHHH
T ss_pred eeEecCCCCcchHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-ccccccCCCCCchHHHH
Confidence 99875 889999999999999999999 99999999999999999999999999988776 7889999 999999999
Q ss_pred HHHHHHHHhCChhhHHHhccCCCCCCCCcc-cccCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHHH
Q 013516 156 GGAWLYYATGNSSYLQLATTPGLGKHAGVF-WGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSIT 234 (441)
Q Consensus 156 AA~eLy~aTg~~~Y~~~a~~~~~~~~~~~~-~~~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (441)
||+|||+|||+++|+++++.++........ ......+.|+||++..++++||+++. . .+.|++.++.+
T Consensus 219 AAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~y~~~a~~~ 287 (605)
T 1tf4_A 219 GAYWLYKATGDDSYLAKAEYEYDFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET---G--------KQKYIDDANRW 287 (605)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHGGGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH---C--------CHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcccccccccccccccccccchHHHHHHHHHhcc---C--------hHHHHHHHHHH
Confidence 999999999999999999876421000000 00011257999999999999888753 1 25688899999
Q ss_pred HHhhCCCCC--CcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhchhcc
Q 013516 235 MCSYLPTFT--TWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYIL 312 (441)
Q Consensus 235 ~~~~~~~~~--~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~qldYiL 312 (441)
+|.++.+.. ++.+||+|+.|... |||++|++|.+||+++|++++.. ..+.++|+++|++||||||
T Consensus 288 ~~~~~~~~~~~~~~~tp~Gl~~~~~--WGs~~~~~n~a~l~~~~a~~~~~-----------~~~~~~y~~~A~~qidYiL 354 (605)
T 1tf4_A 288 LDYWTVGVNGQRVPYSPGGMAVLDT--WGALRYAANTAFVALVYAKVIDD-----------PVRKQRYHDFAVRQINYAL 354 (605)
T ss_dssp HHHTTTCBTTBCCCBCTTSCBCCCS--SSHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCccccCCCcceecCC--ccHHHHHHHHHHHHHHHHHhccc-----------cccHHHHHHHHHHHHHHhc
Confidence 988775433 45689999998766 49999999999999999997531 1246899999999999999
Q ss_pred CCCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCC-CCCcccccccccccc
Q 013516 313 GKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDK-HDGFRDVRTNYNYTE 391 (441)
Q Consensus 313 G~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~-~d~y~D~~~~y~~nE 391 (441)
|+||+++|||||||+|+|++||||.++|+.. ...+++.+++++|+|+||||||. .|+|.|+|.+|++||
T Consensus 355 G~Np~~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nE 424 (605)
T 1tf4_A 355 GDNPRNSSYVVGFGNNPPRNPHHRTAHGSWT----------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANE 424 (605)
T ss_dssp TCSTTCCCSBTTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTC
T ss_pred CCCCCCcceEecCCCCCCCCCcccccccCcc----------ccccCCccCCCCCcceEEeCCCCCcccccccccchhhcC
Confidence 9999999999999999999999999987421 13446778999999999999998 999999999999999
Q ss_pred cccccchHHHHHHHHhhcCC
Q 013516 392 PTLAGNAGLVAALVALSGEK 411 (441)
Q Consensus 392 vaId~NA~~v~~la~l~~~~ 411 (441)
|||||||+||++||+|....
T Consensus 425 vai~~NA~lv~~lA~l~~~~ 444 (605)
T 1tf4_A 425 VATDYNAGFSSALAMLVEEY 444 (605)
T ss_dssp CCGGGGHHHHHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHHhc
Confidence 99999999999999999875
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=1.8e-87 Score=719.73 Aligned_cols=363 Identities=28% Similarity=0.452 Sum_probs=311.6
Q ss_pred CcchhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhh-----ccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCC
Q 013516 1 MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKT-----FNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDI 75 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm-----~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~ 75 (441)
||+|+++||++.|+++|++||+|||||||+|||||| |..+ |.||+||||+.. ||.+|++||++
T Consensus 133 ~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~----g~~y~qVgdg~~--------Dh~~w~~Pe~~ 200 (611)
T 2yik_A 133 TVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNV----VAFCHQVGDGDI--------DHAFWGAPEND 200 (611)
T ss_dssp HHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCE----EEEEEEESCHHH--------HTTCCSCGGGC
T ss_pred HHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCC----CcEEEEeCCCCc--------cccCCCChhhC
Confidence 699999999999999999999999999999999999 6666 999999999877 99999999999
Q ss_pred CCCCcccccC---ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCccc
Q 013516 76 DYDRPVTECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWD 151 (441)
Q Consensus 76 ~~~R~~~~~~---p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~D 151 (441)
+++|++|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++||+.|.++.+..+++|+|+++.|
T Consensus 201 ~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~D 280 (611)
T 2yik_A 201 TMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQD 280 (611)
T ss_dssp CSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHH
T ss_pred CCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCccc
Confidence 9999998774 899999999999999999999 999999999999999999999999999777666789999999999
Q ss_pred HHHHHHHHHHHHhCChhhHHHhccCCCCCCCCcccccCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHH
Q 013516 152 EFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQT 231 (441)
Q Consensus 152 e~~wAA~eLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 231 (441)
|++|||+|||++||+++|++++++++. .+. ...+.|+|+++..++++||+++...... ....+.+.|++.+
T Consensus 281 El~WAAawLy~ATgd~~Yl~~a~~~~~-----~~~--~~~~~~~Wd~~~~g~~~lLa~~~~~~~~--~~~~~~~~y~~~~ 351 (611)
T 2yik_A 281 DYCWAAAWLYLATQNEHYLDEAFKYYD-----YYA--PPGWIHCWNDVWSGTACILAEINDLYDK--DSQNFEDRYKRAS 351 (611)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHCC-----TTS--TTTSCSBTTBCHHHHHHHHHHHHHHHST--TSSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH-----Hhc--cCCccCccccchHHHHHHHHhccccccc--cccchhHHHHHHH
Confidence 999999999999999999999987641 121 2245799999999999988876421100 0112345566665
Q ss_pred HHH----------HHhhCCC--CCCcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHH
Q 013516 232 SIT----------MCSYLPT--FTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDT 299 (441)
Q Consensus 232 ~~~----------~~~~~~~--~~~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 299 (441)
+.. +|..+.+ .....+||+|+.|... |||++|++|++|++++|++++. ...++
T Consensus 352 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~--WGs~~~~~~~afl~~~ya~~~~-------------~~~~~ 416 (611)
T 2yik_A 352 NKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQ--WGSARYNTAAQLIALVYDKHHG-------------DTPSK 416 (611)
T ss_dssp TCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCS--TTHHHHHHHHHHHHHHHHHTTT-------------SSCCH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCC--CchHHHHHHHHHHHHHHHHhcC-------------ccHHH
Confidence 543 1211111 1245689999998654 5999999999999999998542 24689
Q ss_pred HHHHHHhhchhccCCCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCCCCC
Q 013516 300 LREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDG 379 (441)
Q Consensus 300 y~~~A~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~d~ 379 (441)
|+++|++|||||||+||+++|||||||+|+|++||||.++|+. ..+.+.|++++|+|+||||||..|+
T Consensus 417 y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~------------~~~~p~p~~~vl~GaLVGGPd~~d~ 484 (611)
T 2yik_A 417 YANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK------------DANDSSPHKYVLYGALVGGPDASDQ 484 (611)
T ss_dssp HHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCS------------CTTCCSCCSSCCTTCBCSCCCTTSC
T ss_pred HHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCcc------------cccCCCCCCCCCCceeecCCCcccC
Confidence 9999999999999999999999999999999999999998863 1346788999999999999999999
Q ss_pred cccccccccccccccccchHHHHHHHHhhcCC
Q 013516 380 FRDVRTNYNYTEPTLAGNAGLVAALVALSGEK 411 (441)
Q Consensus 380 y~D~~~~y~~nEvaId~NA~~v~~la~l~~~~ 411 (441)
|.|+|.+|++|||||||||+||++||+|....
T Consensus 485 y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~ 516 (611)
T 2yik_A 485 HVDRTNDYIYNEVAIDYNAAFVGACAGLYRFF 516 (611)
T ss_dssp CCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceeeccceecCccHHHHHHHHHHHhc
Confidence 99999999999999999999999999998753
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=2.6e-86 Score=710.51 Aligned_cols=362 Identities=31% Similarity=0.505 Sum_probs=313.3
Q ss_pred CcchhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCc
Q 013516 1 MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRP 80 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~ 80 (441)
||+|+++||++.|+++|++||||||||||+|||||||+++ +.||+||||+.. ||.+|++||+++.+|+
T Consensus 72 ~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~--------DH~~w~~pe~~~~~r~ 139 (614)
T 1g87_A 72 MLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTP----GVYYYQVGDGGK--------DHSWWGPAEVMQMERP 139 (614)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH--------HHTCCSCGGGCCSCCC
T ss_pred HHHHHHHHhHHHHhhCCChHHHHHHHHHHHHHHHHhccCC----CcEEEEecCCCc--------CccccCCcccCCCCCc
Confidence 6899999999999999999999999999999999999988 999999999876 9999999999999999
Q ss_pred ccccC---ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHHH
Q 013516 81 VTECS---SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWG 156 (441)
Q Consensus 81 ~~~~~---p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~wA 156 (441)
+|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++||+.+. .+..+++|+|+++.||++||
T Consensus 140 ~y~v~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~ss~~~DEl~WA 217 (614)
T 1g87_A 140 SFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAG--YTAASGYYSSSSFYDDLSWA 217 (614)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSCSHHHHHHH
T ss_pred ceEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCcCcCCcCCCCchhHHHHH
Confidence 99876 899999999999999999999 9999999999999999999999998764 33457899999999999999
Q ss_pred HHHHHHHhCChhhHHHhccCCCCCCC-CcccccCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHHHH
Q 013516 157 GAWLYYATGNSSYLQLATTPGLGKHA-GVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITM 235 (441)
Q Consensus 157 A~eLy~aTg~~~Y~~~a~~~~~~~~~-~~~~~~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (441)
|+|||+|||+++|+++++.++..... .........+.|+||++..++++||+++. . ...|++.++..+
T Consensus 218 AawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~---~--------~~~~~~~~~~~~ 286 (614)
T 1g87_A 218 AVWLYLATNDSTYLDKAESYVPNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLT---N--------KQLYKDSIEMNL 286 (614)
T ss_dssp HHHHHHHHCCHHHHHHHHHTGGGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHH---C--------CHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhccccccccccccCCcCccchHHHHHHHHHhcc---C--------cHHHHHHHHHHH
Confidence 99999999999999999876421000 00000112357999999999999998863 2 145777788888
Q ss_pred HhhCCCC--CCcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhchhccC
Q 013516 236 CSYLPTF--TTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILG 313 (441)
Q Consensus 236 ~~~~~~~--~~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~qldYiLG 313 (441)
+.++++. ..+.+||+||.|... |||+||++|++||+++|++++ .|+ ..++.+|+++|++|||||||
T Consensus 287 ~~~~~~~~~~~~~~tp~Gl~~~~~--Wgs~~~~~n~afl~~~y~~~~--------~~~--~~~~~~y~~~A~~qidYiLG 354 (614)
T 1g87_A 287 DFWTTGVNGTRVSYTPKGLAWLFQ--WGSLRHATTQAFLAGVYAEWE--------GCT--PSKVSVYKDFLKSQIDYALG 354 (614)
T ss_dssp HHHTTCBTTBCCEECTTSCEECCS--SSHHHHHHHHHHHHHHHHHST--------TSC--HHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhccCCCccccCCCCceeccC--CCcHHHHHHHHHHHHHHHHhh--------CCC--ccCHHHHHHHHHHHHHHhcC
Confidence 7777433 245689999999876 499999999999999999964 132 22478999999999999999
Q ss_pred CCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCCCCCcccccccccccccc
Q 013516 314 KNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPT 393 (441)
Q Consensus 314 ~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~nEva 393 (441)
+| ++|||||||+|+|++||||.++|+.. .+.+.+.|++++|+|+||||||..|+|.|+|.+|++||||
T Consensus 355 ~n--~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEva 422 (614)
T 1g87_A 355 ST--GRSFVVGYGVNPPQHPHHRTAHGSWT----------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIA 422 (614)
T ss_dssp TT--SSCCBTTSSSSCCSCCBCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCC
T ss_pred CC--CcceEeccCCCCCCCCcchhhccCcc----------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCc
Confidence 98 79999999999999999999998632 1345678899999999999999999999999999999999
Q ss_pred cccchHHHHHHHHhhcCC
Q 013516 394 LAGNAGLVAALVALSGEK 411 (441)
Q Consensus 394 Id~NA~~v~~la~l~~~~ 411 (441)
|||||+||++||+|....
T Consensus 423 i~~NA~lv~~lA~l~~~~ 440 (614)
T 1g87_A 423 CDYNAGFTGALAKMYKHS 440 (614)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHhc
Confidence 999999999999999864
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=9.8e-77 Score=640.02 Aligned_cols=348 Identities=18% Similarity=0.232 Sum_probs=284.8
Q ss_pred CcchhHhhcHHHHHH--------cCCcHHHHHHHHHHHHHHHhhcccc-ccccCcEEEEecCCCCCCCCCCCCCCCCcCC
Q 013516 1 MLSWSVIEYSAKYEA--------AGELNHVKEIIKWGTDYFLKTFNHS-ADSISRMVAQVGAGDTSGGSTTPNDHYCWMR 71 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~--------~~~~pdiLde~kwg~D~llkm~~~~-~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~ 71 (441)
||+|+++||++.|++ +|++||+|||||||+|||||||.++ . |.+|+|||+..+ ||. .+
T Consensus 205 ~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~---g~~y~~vgd~~~--------~~~--~~ 271 (639)
T 1clc_A 205 SMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGS---GRVAHKVSTRNF--------GGF--IM 271 (639)
T ss_dssp HHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSS---CCBEEEEECSSC--------CCS--CC
T ss_pred HHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCC---CeEEEEecCCCC--------CCC--CC
Confidence 599999999999987 8999999999999999999998754 1 689999999876 775 89
Q ss_pred CCCCCCCCcccccCccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCC-cCCCcccccccCCCCCc
Q 013516 72 PEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRAR-YSAGSAEAAKFYNSTSY 149 (441)
Q Consensus 72 Pe~~~~~R~~~~~~p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~-y~~~~~~~~g~Y~~~~~ 149 (441)
||+++.+|+++. +++++++++|||||+|||||| +||+||++||++||++|+||++||+. |.++....+++|+|+++
T Consensus 272 Pe~~~~~R~~~~--~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~ 349 (639)
T 1clc_A 272 PENEHDERFFVP--WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSD 349 (639)
T ss_dssp GGGCCSCCEEEE--ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCS
T ss_pred chhcCCCceEec--CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCc
Confidence 999999999887 478899999999999999999 99999999999999999999999998 56555556789999999
Q ss_pred ccHHHHHHHHHHHHhCChhhHHHhccCCCCCCCCcccccCCCccccccchhHHHHHHHh-hhhhhcCCCCChHHHHHHHH
Q 013516 150 WDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLS-RLRLFLSPGYPYEEMLRTFH 228 (441)
Q Consensus 150 ~De~~wAA~eLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~ll~-~~~~~~~~~~~~~~~~~~~~ 228 (441)
.||++|||+|||+|||+++|++++++++. .+. ......|+|+++..+++++|+ +......+. ..+.+++.++
T Consensus 350 ~DEl~WAAawLy~ATgd~~Yl~~a~~~~~-----~~~-~~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~ 422 (639)
T 1clc_A 350 ADDRLWAAAEMWETLGDEEYLRDFENRAA-----QFS-KKIEADFDWDNVANLGMFTYLLSERPGKNPA-LVQSIKDSLL 422 (639)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHH-----TCS-SSCCSSCCTTCCHHHHHHHHHHCCCSCCCHH-HHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHHHHH-----hhc-cccCCCCCchhhHHHHHHHHHhhhhhccChH-HHHHHHHHHH
Confidence 99999999999999999999999987631 111 011223599999998888776 321111100 0123333444
Q ss_pred HHHHHHHHhhCCCCCCcccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhc
Q 013516 229 NQTSITMCSYLPTFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQI 308 (441)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~ql 308 (441)
+.++.+++. ...+|+|+.+....+||||++++|.+|+++++.++ +++.+|+++|++||
T Consensus 423 ~~a~~~~~~-------~~~~~~g~~~~~~~~WGsn~~~~~~a~~~~~a~~l---------------~~~~~~~~~A~~qi 480 (639)
T 1clc_A 423 STADSIVRT-------SQNHGYGRTLGTTYYWGCNGTVVRQTMILQVANKI---------------SPNNDYVNAALDAI 480 (639)
T ss_dssp HHHHHHHHH-------HHTSTTCCTTTTCCCTTHHHHHHHTHHHHHHHHHH---------------SCCHHHHHHHHHHH
T ss_pred HHHHHHHHh-------ccCCCCCcccCCCCCCchHHHHHHHHHHHHHHHhc---------------CCHHHHHHHHHHHH
Confidence 444444432 23566776542122469999999999999887663 35789999999999
Q ss_pred hhccCCCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCC-CCCcccccccc
Q 013516 309 DYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDK-HDGFRDVRTNY 387 (441)
Q Consensus 309 dYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~-~d~y~D~~~~y 387 (441)
|||||+||+++|||||||.|+|++||||.+++. | .+++++|+||||||. .|+|.|+|.+|
T Consensus 481 dYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~----------~---------~~~~~~GalVGGP~~~~d~y~D~r~~y 541 (639)
T 1clc_A 481 SHVFGRNYYNRSYVTGLGINPPMNPHDRRSGAD----------G---------IWEPWPGYLVGGGWPGPKDWVDIQDSY 541 (639)
T ss_dssp HHHHTCSTTCCCSBTTSSSSCCSSCBCHHHHHS----------S---------CSSCCSSCBCCCCCSSTTCCCCCTTCT
T ss_pred hhccCCCCCCceEEEecCCCCCCCCcchhhccC----------C---------CCCCCCeeeecCCCccccccccCcccc
Confidence 999999999999999999999999999976532 1 236799999999999 99999999999
Q ss_pred cccccccccchHHHHHHHHhhcCC
Q 013516 388 NYTEPTLAGNAGLVAALVALSGEK 411 (441)
Q Consensus 388 ~~nEvaId~NA~~v~~la~l~~~~ 411 (441)
++|||+|||||+|+++|+++....
T Consensus 542 ~~nE~~~~~nA~~v~~la~~~~~~ 565 (639)
T 1clc_A 542 QTNEIAINWNAALIYALAGFVNYN 565 (639)
T ss_dssp TTSBCCHHHHHHHHHHHHTTTTCC
T ss_pred eeccccccchHHHHHHHHHhhhcc
Confidence 999999999999999999987643
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=9e-77 Score=628.84 Aligned_cols=345 Identities=18% Similarity=0.198 Sum_probs=279.6
Q ss_pred CcchhHhhcHHHHHH-------cCC--cHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCC
Q 013516 1 MLSWSVIEYSAKYEA-------AGE--LNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMR 71 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~-------~~~--~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~ 71 (441)
+|+|++++|++.|+. .|+ +||||||||||+|||||||++++ |.+|+|||+..+ +..|.+
T Consensus 160 ~L~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~---g~~y~~v~~~~w---------~g~~~~ 227 (537)
T 3gzk_A 160 DLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPAT---GGVYHKVTTPSF---------PPLDTR 227 (537)
T ss_dssp HHHHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTT---CCBBSEEECSSC---------CCTTCC
T ss_pred HHHHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCC---CeEEEEecCCCc---------CCCCcC
Confidence 489999999999974 678 99999999999999999998544 999999997532 223589
Q ss_pred CCCCCCCCcccccCccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCc-CCCcccccccCCCCCc
Q 013516 72 PEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARY-SAGSAEAAKFYNSTSY 149 (441)
Q Consensus 72 Pe~~~~~R~~~~~~p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y-~~~~~~~~g~Y~~~~~ 149 (441)
||+++.+|+++++++ ..++++|||||+|||||| +||+||++||++||++|+|+++||+.+ .++.....++|+++++
T Consensus 228 Pe~~~~~R~~~~~~t--~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~ 305 (537)
T 3gzk_A 228 PEDDDAPLVLSPISY--AATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAEL 305 (537)
T ss_dssp GGGCCSCEEECCBCH--HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCC
T ss_pred cccCCCcceEeecCC--cHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCcc
Confidence 999999999998764 458899999999999999 999999999999999999999999875 4444445789999999
Q ss_pred ccHHHHHHHHHHHHhCChhhHHHhccCCCCCCCCcccccCCCccccccchhHHHHH--HHhhhhhhcCCCCChHHHHHHH
Q 013516 150 WDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAAL--LLSRLRLFLSPGYPYEEMLRTF 227 (441)
Q Consensus 150 ~De~~wAA~eLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~--ll~~~~~~~~~~~~~~~~~~~~ 227 (441)
.||++|||+|||++||+.+|++++++++. ..+ .+.|+||++..++++ |++++.. .+ ....+++++.+
T Consensus 306 ~Del~wAA~~Ly~aTgd~~Yl~~a~~~~~----~~~-----~~~~~Wd~~~~~~~~~ll~~~~~~-~~-~~~~~~~~~~~ 374 (537)
T 3gzk_A 306 RDELLWASCALLRMTGDSAWARVCEPLLD----LDL-----PWELGWADVALYGVMDYLRTPRAA-VS-DDVRNKVKSRL 374 (537)
T ss_dssp HHHHHHHHHHHHHHHCCGGGHHHHHHHHH----SCC-----CCCCSSSCCHHHHHHHHHTSCGGG-SC-HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHHhhh----ccC-----CCccchHHhHHHHHHHHHhCcccc-CC-HHHHHHHHHHH
Confidence 99999999999999999999999987642 111 247999999987764 4444320 01 00112333444
Q ss_pred HHHHHHHHHhhCCCCCCcccCCCCceecCC-CCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHH-H
Q 013516 228 HNQTSITMCSYLPTFTTWNRTRGGLIQLNH-GNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFA-K 305 (441)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~-~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A-~ 305 (441)
++.++.++. ....+|+|+.+... .-||||++++|.+++++++.++ +++.+|+++| +
T Consensus 375 ~~~ad~~~~-------~~~~~~~g~~~~~~~~~WGsn~~~~n~a~~l~~a~~~---------------~~~~~y~~~aa~ 432 (537)
T 3gzk_A 375 LRELDALAA-------MAESHPFGIPMRDDDFIWGSNMVLLNRAMAFLLAEGV---------------GVLHPAAHTVAQ 432 (537)
T ss_dssp HHHHHHHHH-------HHHHSTTCCSCCGGGCCTTHHHHHHHHHHHHHHHGGG---------------TCCCTTHHHHHH
T ss_pred HHHHHHHHH-------hccCCCCceeecCCCCcccchHHHHHHHHHHHHHhhc---------------cCCHHHHHHHHH
Confidence 444444322 12356777766542 1259999999999999988873 2456899999 9
Q ss_pred hhchhccCCCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCCCCCCccceeecCCCCC--------
Q 013516 306 TQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKH-------- 377 (441)
Q Consensus 306 ~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~-------- 377 (441)
+|||||||+||+++|||||||+|+|++||||.++++ .+++++||+||||||..
T Consensus 433 ~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~s~~~-------------------~~~~p~~GalVGGPn~~~~D~~~~~ 493 (537)
T 3gzk_A 433 RAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVAD-------------------DVDHPVPGMVVGGPNRHLQDEIARA 493 (537)
T ss_dssp HHHHHHBTCSTTCCBCBBTCSSSCBCSCBCHHHHHH-------------------CTTSCCTTCBCCCCCTTCCSHHHHH
T ss_pred HhHHHhcCCCCCCceeEecCCCCCCCCCcchhhhcC-------------------CCCCCCCCCCccCCCcccccchhhh
Confidence 999999999999999999999999999999998652 13468999999999976
Q ss_pred --------CCcccccccccccccccccchHHHHHHHHhhcCC
Q 013516 378 --------DGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEK 411 (441)
Q Consensus 378 --------d~y~D~~~~y~~nEvaId~NA~~v~~la~l~~~~ 411 (441)
|+|.|+|.+|++|||||||||+||++||+|.+..
T Consensus 494 ~~~~~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~ 535 (537)
T 3gzk_A 494 QLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEAR 535 (537)
T ss_dssp HCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSCC
T ss_pred cccCCCcccCcCCCCccccccccchHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999999999998753
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.8e-75 Score=628.03 Aligned_cols=357 Identities=17% Similarity=0.185 Sum_probs=284.2
Q ss_pred HHcCCcHHHHHHHHHHHHHHHhhccccccccC---cEEEEecCCCCCCCCCCCCCCCCc---CCCCCCCCCCcccccCcc
Q 013516 14 EAAGELNHVKEIIKWGTDYFLKTFNHSADSIS---RMVAQVGAGDTSGGSTTPNDHYCW---MRPEDIDYDRPVTECSSC 87 (441)
Q Consensus 14 ~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~---~~y~qVGd~~~~~~~~~~~Dh~~w---~~Pe~~~~~R~~~~~~p~ 87 (441)
+++|++||||||||||+|||||||..+ + .+|.|||+... ||.+| .+||+++.+|++. .|+
T Consensus 221 es~n~~~d~ldeikwg~D~llk~q~~~----g~~~~~~g~v~~~~~--------D~~w~g~~~~Pe~~~~~R~~~--~p~ 286 (609)
T 1ut9_A 221 EQNNGYPDILDEARWEIEFFKKMQVTE----KEDPSIAGMVHHKIH--------DFRWTALGMLPHEDPQPRYLR--PVS 286 (609)
T ss_dssp TTTSSSCHHHHHHHHHHHHHHHHBCCT----TTCGGGTTCEECEEE--------ESSCCCSSCCGGGCCSBEEEC--CEE
T ss_pred cccCcHHHHHHHHHHHHHHHHHhccCC----CCcceEEEEecCCCC--------CcccCCCCCChhhCCCceeec--CCC
Confidence 457899999999999999999999987 5 78888887755 99777 4899999999874 378
Q ss_pred chHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcc----cccccCCCCCcccHHHHHHHHHHH
Q 013516 88 SDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSA----EAAKFYNSTSYWDEFIWGGAWLYY 162 (441)
Q Consensus 88 sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~----~~~g~Y~~~~~~De~~wAA~eLy~ 162 (441)
+++++++|||||+|||||| +||+||++||++||++|+||++||+.|.+..+ ..+++|+|+++.||++|||+|||+
T Consensus 287 t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ 366 (609)
T 1ut9_A 287 TAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYV 366 (609)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccHHHHHHHHHHH
Confidence 9999999999999999999 99999999999999999999999999876532 346899999999999999999999
Q ss_pred HhCChhhHHHhccCCCCCC-CCccc------c--cCCCccccccchhHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHH
Q 013516 163 ATGNSSYLQLATTPGLGKH-AGVFW------G--ILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSI 233 (441)
Q Consensus 163 aTg~~~Y~~~a~~~~~~~~-~~~~~------~--~~~~~~~~Wd~~~~~a~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (441)
|||+++|+++++++....+ ...+. + ......|+||+|..+++++|+.+..... +...+..++.++..++.
T Consensus 367 ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Wd~~~~~~~~lla~~~~~l~-~~~~~~~~~~~~~~ad~ 445 (609)
T 1ut9_A 367 TTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTWGTTQGLGTITLALVENGLP-ATDIQKARNNIAKAADR 445 (609)
T ss_dssp HHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCSSCCHHHHHHHHHHSCCSSC-HHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccchhhhHHHHHHHHHhcccccc-hhHHHHHHHHHHHHHHH
Confidence 9999999999998642100 00111 0 1123479999999999998886431111 00012345566667777
Q ss_pred HHHhhCCCCCC-----cccCCCCceecCCCCCCcHHHHHHHHHHHHHHhhhhhhcCCCCccCCCCCCChHHHHHHHHhhc
Q 013516 234 TMCSYLPTFTT-----WNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQI 308 (441)
Q Consensus 234 ~~~~~~~~~~~-----~~~tp~Gl~~~~~~wwgs~~~~~n~a~l~~~~~~~~~~~~~~g~~~~~~~~~~~~y~~~A~~ql 308 (441)
++|.......+ ..+||+|+. |||+||++|.+|+++++.++ +++.+|+++|++||
T Consensus 446 ~~~~~~~~~~g~~~~~~~~t~gg~~------WGs~~~~~n~a~~~~~a~~~---------------~~~~~y~~~A~~qi 504 (609)
T 1ut9_A 446 WLENIEEQGYRLPIKQAEDERGGYP------WGSNSFILNQMIVMGYAYDF---------------TGDSKYLDGMFDGI 504 (609)
T ss_dssp HHHHHHTCTTCCSCCCCSSSSCSCC------TTHHHHHHHHHHHHHHHHHH---------------HCCTHHHHHHHHHH
T ss_pred HHHhhccCCCCccccccccCCCCcc------cccCHHHHHHHHHHHHHHHh---------------cChHHHHHHHHHHH
Confidence 77765543222 235677774 39999999999999888774 25789999999999
Q ss_pred hhccCCCCCCCceeeeeCCCCCCCcccCCCCCCCC----ccccccCCCcccccCCCCCCCCccceeecCCCCCCCccccc
Q 013516 309 DYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKN----KIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVR 384 (441)
Q Consensus 309 dYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~----~~~~~c~~g~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~ 384 (441)
|||||+||+++|||||||+|+|++||||+++.+.+ ....+|..|. .++..+++++ .|+|||||+..|+|.|+|
T Consensus 505 dYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l~Gg--p~~~~~dp~~-~ga~vggp~~~d~y~D~r 581 (609)
T 1ut9_A 505 SYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISGG--PNSRFEDPTI-NAAVKKDTPPQKCFIDHT 581 (609)
T ss_dssp HHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCBCCC--CCTTCCSHHH-HHHSCTTCCGGGCCCCCT
T ss_pred HhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCCCCC--CCCCCCCccc-ccccCCCCccccCcCccc
Confidence 99999999999999999999999999997553221 1245675552 3444555555 899999999999999999
Q ss_pred ccccccccccccchHHHHHHHHhhc
Q 013516 385 TNYNYTEPTLAGNAGLVAALVALSG 409 (441)
Q Consensus 385 ~~y~~nEvaId~NA~~v~~la~l~~ 409 (441)
.+|++|||||||||+||++||+|.+
T Consensus 582 ~~y~~nEvaid~NA~lv~~lA~l~~ 606 (609)
T 1ut9_A 582 DSWSTNEITVNWNAPFAWVTAYLDQ 606 (609)
T ss_dssp TCHHHHBCCHHHHHHHHHHHHHHHH
T ss_pred cccccccceecchHHHHHHHHHHHh
Confidence 9999999999999999999999975
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-49 Score=420.57 Aligned_cols=350 Identities=17% Similarity=0.169 Sum_probs=233.1
Q ss_pred CcchhHhhcHHHHHHcCC-----cHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCC---cCCC
Q 013516 1 MLSWSVIEYSAKYEAAGE-----LNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYC---WMRP 72 (441)
Q Consensus 1 ~L~W~~~~f~~~~~~~~~-----~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~---w~~P 72 (441)
||+|+++++.+.+....+ +||||||||||+|||||||+++ |.||+||||. +. +.+ +... +.+|
T Consensus 166 ~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~----g~~y~qVgd~-W~-~d~---~~R~~~~~~~~ 236 (586)
T 3h7l_A 166 MVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEK----GFFYMTVFDK-WS-KDT---AQREICAYETQ 236 (586)
T ss_dssp HHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTT----SCBBCEEECT-TC-CCG---GGCEEEEEETT
T ss_pred HHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCC----CeEEEEecCC-CC-CCC---CccccccccCC
Confidence 578999999888876542 7999999999999999999998 9999999986 21 000 1110 1223
Q ss_pred CCCCCCCcccccCccchHHHHHHHHHHHHcccccCCHHH-HHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCccc
Q 013516 73 EDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAY-SQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWD 151 (441)
Q Consensus 73 e~~~~~R~~~~~~p~sd~a~~~AAalA~As~vfk~D~~y-A~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~D 151 (441)
+.+..+| |.++ .+..++.+|||||+|||||+ |++| +++||++|+++|+|+++|++.|... .+.++.|
T Consensus 237 ~~~~~~~--y~~~-~~~~agl~aAALA~Asrvf~-d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--------g~~~~~D 304 (586)
T 3h7l_A 237 LGHKFDD--YQAG-FRQGGGVAIAALAAASRLGV-HGEYDQQKYRNAAENGYWHLKEHNTQYLND--------GEENIID 304 (586)
T ss_dssp TTEEESC--CBCC-GGGTHHHHHHHHHHHTTSSS-CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT--------SCCCHHH
T ss_pred CCCCCcc--eecC-CCCcHHHHHHHHHHHhcccC-CCCcChHHHHHHHHHHHHHHHhcCccccCC--------CCccchh
Confidence 3222223 3333 12346789999999999998 8888 8999999999999999999876432 2367889
Q ss_pred HH--HHHHHHHHHHhCChhhHHHhccCCCCCCCCcccccCCCccccccc------------hhHHHHHHHhhhhhhcCCC
Q 013516 152 EF--IWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDN------------KLAGAALLLSRLRLFLSPG 217 (441)
Q Consensus 152 e~--~wAA~eLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~------------~~~~a~~ll~~~~~~~~~~ 217 (441)
|+ +|||+|||++||+.+|+++++.+...- ...|.. .....+.|.+ ......+.|+++.......
T Consensus 305 e~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l-~~~~~~-~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~ 382 (586)
T 3h7l_A 305 EYCALLASVELFKATKETRYLEESRLWAQRL-VARQMS-DEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDS 382 (586)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HTTEEC-CSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCST
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhccC-CccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCCh
Confidence 99 999999999999999999998743100 001111 1123466763 3333333333332122211
Q ss_pred CChHHHHHHHHHHHHHHHH--h-----------hCCCCCCcccCCCCceecC--CCCC-CcHHHHHHHHHHHHHHhhhhh
Q 013516 218 YPYEEMLRTFHNQTSITMC--S-----------YLPTFTTWNRTRGGLIQLN--HGNP-QPLQYVVNAAFLATLFSDYLD 281 (441)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~tp~Gl~~~~--~~ww-gs~~~~~n~a~l~~~~~~~~~ 281 (441)
...+.+.+.+++.++..+. + ++...+...+++.++...+ ..|| |||++++|.+++++++++++.
T Consensus 383 ~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~ 462 (586)
T 3h7l_A 383 VQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIA 462 (586)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCC
T ss_pred HHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcC
Confidence 1123334444444432111 1 1111111123334444443 2589 999999999999999988541
Q ss_pred hcCCCCccCCCCCCChHHHHHHHHhhchhccCCCCCCCceeeeeCCCCCCCcccCCCCCCCCccccccCCCcccccCCCC
Q 013516 282 AADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKP 361 (441)
Q Consensus 282 ~~~~~g~~~~~~~~~~~~y~~~A~~qldYiLG~Np~g~SyV~G~G~~~p~~pHHR~s~~~~~~~~~~c~~g~~~~~~~~~ 361 (441)
.. ....+|+++|++|||||||+||+++|||||||.|+|+ ||.+. + .+
T Consensus 463 ~~-----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~------------~-------~~ 509 (586)
T 3h7l_A 463 SQ-----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY------------G-------FF 509 (586)
T ss_dssp CH-----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG------------T-------BC
T ss_pred Cc-----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc------------C-------CC
Confidence 00 0138999999999999999999999999999999876 67642 1 11
Q ss_pred CCCCccceeecCCCCC--C----------CcccccccccccccccccchHHHHHHHHhhc
Q 013516 362 NPNTLVGALVAGPDKH--D----------GFRDVRTNYNYTEPTLAGNAGLVAALVALSG 409 (441)
Q Consensus 362 ~~~~l~GaLVGGPn~~--d----------~y~D~~~~y~~nEvaId~NA~~v~~la~l~~ 409 (441)
.+||.|||||+.. | ...|.-.+|.-+|--|=--|=|..+++.-.+
T Consensus 510 ---~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~~~~ 566 (586)
T 3h7l_A 510 ---NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMSQAQ 566 (586)
T ss_dssp ---CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHHHHH
T ss_pred ---CCCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHHHHH
Confidence 3899999999854 1 2335567899999888766666655555443
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.64 E-value=0.042 Score=54.70 Aligned_cols=81 Identities=10% Similarity=-0.047 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHccc-ccCCHHHHHHHHHHHHHHHHHHHhc---C-CCcCCCc-ccccccCCCCCcccH---HHHHHHHH
Q 013516 90 LAAEMAASLAAASIV-FKDNKAYSQKLVHGAKTLFQFSRQQ---R-ARYSAGS-AEAAKFYNSTSYWDE---FIWGGAWL 160 (441)
Q Consensus 90 ~a~~~AAalA~As~v-fk~D~~yA~~~l~~A~~~y~~a~~~---p-~~y~~~~-~~~~g~Y~~~~~~De---~~wAA~eL 160 (441)
..|.++.++|.|+++ ++ ++.| ++.|++..+|+.++ | +.+.... .++. .-.......+ +++|.+++
T Consensus 54 ~nar~i~~~a~a~~~~~~-~~~~----~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~-~~~~~~~~~~~af~i~al~~~ 127 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEK-RENW----LKIARNGAKFLAQHGRDDEGNWYFALTRGGE-PLVQPYNIFSDCFAAMAFSQY 127 (388)
T ss_dssp HHHHHHHHHHHHHHHTCC-CHHH----HHHHHHHHHHHHHHSBCTTSCBCSEECTTSC-BCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-CHHH----HHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC-cccCCcchHHHHHHHHHHHHH
Confidence 366899999999998 66 6765 88999999999886 1 2221110 0000 0000111112 46788999
Q ss_pred HHHhCChhhHHHhccC
Q 013516 161 YYATGNSSYLQLATTP 176 (441)
Q Consensus 161 y~aTg~~~Y~~~a~~~ 176 (441)
|++||+..|++.|++.
T Consensus 128 y~~tg~~~~l~~A~~~ 143 (388)
T 2gz6_A 128 ALASGEEWAKDVAMQA 143 (388)
T ss_dssp HHHHCCHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHH
Confidence 9999999999988764
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.29 E-value=0.014 Score=58.10 Aligned_cols=138 Identities=13% Similarity=0.066 Sum_probs=85.1
Q ss_pred chhHhhcHHHHHHcCCcHHHHHHHHHHHHHH-HhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcc
Q 013516 3 SWSVIEYSAKYEAAGELNHVKEIIKWGTDYF-LKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPV 81 (441)
Q Consensus 3 ~W~~~~f~~~~~~~~~~pdiLde~kwg~D~l-lkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~ 81 (441)
+|-.+.+-+.|+.. +-+..|+.++-..++| .+-+++. ..|+|+-+ .+. ..
T Consensus 95 a~~~la~~~aye~t-~~~~yL~~A~~l~~~l~~~~wd~~--~gGGi~W~--------------------~~~------~~ 145 (349)
T 3k7x_A 95 LWNALAAYRLYKAT-GKSIYLEDAQLVWQDLVDTGWNDI--MGGGFAWR--------------------RPQ------MY 145 (349)
T ss_dssp HHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHTBCSG--GGSCBEEE--------------------TTE------EE
T ss_pred HHHHHHHHHHHHHH-CCchHHHHHHHHHHHHHHhCCCCC--CCCceEec--------------------CCC------cc
Confidence 45456777788765 5588999999999999 5655542 01444433 211 12
Q ss_pred cccCccchHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhc---C-CCcCCCcccccccCCC--CCcc---cH
Q 013516 82 TECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ---R-ARYSAGSAEAAKFYNS--TSYW---DE 152 (441)
Q Consensus 82 ~~~~p~sd~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~---p-~~y~~~~~~~~g~Y~~--~~~~---De 152 (441)
|+. ..+ .+.++.++|..+++++ |+.| |+.|+++|+|..++ + +.+.++.......+.+ ..|. --
T Consensus 146 ~kn-ais--N~~~~~~la~l~~~tg-d~~Y----l~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~ 217 (349)
T 3k7x_A 146 YKN-TPV--NAPFIILSCWLYNELN-ETKY----LEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGV 217 (349)
T ss_dssp EEE-HHH--HHHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHH
T ss_pred ccc-hhh--HHHHHHHHHHHHHHhC-CHHH----HHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHH
Confidence 332 122 4466777777777776 7765 99999999999874 2 2222221100001111 1121 13
Q ss_pred HHHHHHHHHHHhCChhhHHHhccCC
Q 013516 153 FIWGGAWLYYATGNSSYLQLATTPG 177 (441)
Q Consensus 153 ~~wAA~eLy~aTg~~~Y~~~a~~~~ 177 (441)
++.|+++||++||+++|++.+++..
T Consensus 218 ~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 218 YIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 6889999999999999999998753
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.10 E-value=0.11 Score=51.43 Aligned_cols=68 Identities=22% Similarity=0.360 Sum_probs=48.4
Q ss_pred HHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHH---HHHHHHHHhCChhh
Q 013516 93 EMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIW---GGAWLYYATGNSSY 169 (441)
Q Consensus 93 ~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~w---AA~eLy~aTg~~~Y 169 (441)
.+..+|.-++++.+ |++| ++.|++...+.......+ . -.++.||..| |.+.+|++||+.+|
T Consensus 50 ~~~~~l~d~~~~tg-d~~y----~~~a~~~~~~~~~~~~~~----------~-~~~~~DD~a~~~la~~~aye~t~~~~y 113 (349)
T 3k7x_A 50 HLVEVRLDAYLRTK-KQAD----LEVAEKTYLHNKNRNGGT----------L-IHDFYDDMLWNALAAYRLYKATGKSIY 113 (349)
T ss_dssp HHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHHHTTSS----------S-CCSBHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHhC-CHHH----HHHHHHHHHHHHhcCCCC----------C-CccCccHHHHHHHHHHHHHHHHCCchH
Confidence 34588889998886 7776 777777777776532111 0 1234577654 89999999999999
Q ss_pred HHHhccC
Q 013516 170 LQLATTP 176 (441)
Q Consensus 170 ~~~a~~~ 176 (441)
++.+++.
T Consensus 114 L~~A~~l 120 (349)
T 3k7x_A 114 LEDAQLV 120 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998754
No 14
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.05 E-value=0.069 Score=53.13 Aligned_cols=132 Identities=5% Similarity=-0.020 Sum_probs=80.3
Q ss_pred cHHHHHHcCCcHHHHHHHHHHHHHHHhh-ccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCcc
Q 013516 9 YSAKYEAAGELNHVKEIIKWGTDYFLKT-FNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSC 87 (441)
Q Consensus 9 f~~~~~~~~~~pdiLde~kwg~D~llkm-~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~ 87 (441)
|-..|+..-+-|+.++.++-+++||++- ++++ |++|+.+.- | +.|.+ ..+..+
T Consensus 62 ~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~----Gg~~~~~d~-----------d----g~~~~--~~~~~~----- 115 (388)
T 2gz6_A 62 FSMLCNQLEKRENWLKIARNGAKFLAQHGRDDE----GNWYFALTR-----------G----GEPLV--QPYNIF----- 115 (388)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTT----SCBCSEECT-----------T----SCBCC--CCCCHH-----
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCC----CCEEEEEcC-----------C----CCccc--CCcchH-----
Confidence 3445654335689999999999999996 5556 888887731 1 11211 112222
Q ss_pred chHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcC----CCcCCCcccccccCCCCCccc--HHHHHHHHHH
Q 013516 88 SDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQR----ARYSAGSAEAAKFYNSTSYWD--EFIWGGAWLY 161 (441)
Q Consensus 88 sd~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p----~~y~~~~~~~~g~Y~~~~~~D--e~~wAA~eLy 161 (441)
--|-++.+|+.++++.. |++| |+.|++++++..++- +.+....+.. ..+.. ..+ -++.|.+.||
T Consensus 116 --~~af~i~al~~~y~~tg-~~~~----l~~A~~~~~~i~~~~~d~~g~~~~~~~~~-~~~~~--~~~~~~~~~all~l~ 185 (388)
T 2gz6_A 116 --SDCFAAMAFSQYALASG-EEWA----KDVAMQAYNNVLRRKDNPKGKYTKTYPGT-RPMKA--LAVPMILANLTLEME 185 (388)
T ss_dssp --HHHHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHTC--------------C-CCCEE--THHHHHHHHHHHHTG
T ss_pred --HHHHHHHHHHHHHHHhC-CHHH----HHHHHHHHHHHHHHhcCCCcccCcccCCC-CCCCC--CCHHHHHHHHHHHHH
Confidence 13356777777778775 6665 888888888887752 1111111100 01111 112 3467889999
Q ss_pred HHhCChhhHHHhccC
Q 013516 162 YATGNSSYLQLATTP 176 (441)
Q Consensus 162 ~aTg~~~Y~~~a~~~ 176 (441)
++|++..|++.+.+.
T Consensus 186 ~~t~d~~~~~~A~~~ 200 (388)
T 2gz6_A 186 WLLPQETLENVLAAT 200 (388)
T ss_dssp GGSCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999999988764
No 15
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=93.36 E-value=0.17 Score=50.93 Aligned_cols=130 Identities=16% Similarity=0.098 Sum_probs=72.7
Q ss_pred cHHHHHHcCCcHHHHHHHHHHHHHHHh-hccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCcc
Q 013516 9 YSAKYEAAGELNHVKEIIKWGTDYFLK-TFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSC 87 (441)
Q Consensus 9 f~~~~~~~~~~pdiLde~kwg~D~llk-m~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~ 87 (441)
|-.+|... +.|+.|+.++.+++||++ |.+.+. |++|..+-++ .|.+ ..+.+|
T Consensus 61 ~a~a~~~~-g~~~~l~~A~~~~~fl~~~~~d~~~---Gg~~~~~~dG----------------~~~~--~~~~ly----- 113 (402)
T 3gt5_A 61 YAMAYLQF-GTAEYLDAVHHGLSYVRDVHRNPAT---GGYAWTLCDD----------------RVED--DTNHCY----- 113 (402)
T ss_dssp HHHHHHHH-CCHHHHHHHHHHHHHHHHTTBCTTT---SCBCSEEETT----------------EEEE--CCEEHH-----
T ss_pred HHHHHHhh-CChHHHHHHHHHHHHHHHhCccCCC---CcEEEEeeCC----------------CCCc--CCcchH-----
Confidence 44455433 579999999999999998 444332 6677766221 1211 112222
Q ss_pred chHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhc---C--CCcCCCc-ccc-cccCCCCCcccH--HHHHH
Q 013516 88 SDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQ---R--ARYSAGS-AEA-AKFYNSTSYWDE--FIWGG 157 (441)
Q Consensus 88 sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~---p--~~y~~~~-~~~-~g~Y~~~~~~De--~~wAA 157 (441)
+ .+-+++|++. ..+ .|+++ |+.|++++++..++ | |.|.+.. +.. ...|. ..++- ++-|.
T Consensus 114 -d---~Af~i~al~~-~~~tgd~~~----l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~--~~n~~m~l~eal 182 (402)
T 3gt5_A 114 -G---LAFVMLAYSC-GLKVGIKQA----REWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYR--GQNANMHMCEAM 182 (402)
T ss_dssp -H---HHHHHHHHHH-HHHTTCTTH----HHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCE--EHHHHHHHHHHH
T ss_pred -H---HHHHHHHHHH-HHHhCChhH----HHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCC--CCCHHHHHHHHH
Confidence 1 2222333333 222 46665 78888888888875 1 2222110 000 00111 11122 45689
Q ss_pred HHHHHHhCChhhHHHhccC
Q 013516 158 AWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 158 ~eLy~aTg~~~Y~~~a~~~ 176 (441)
+.||++||+..|++.+.+.
T Consensus 183 l~L~~~tgd~~~~~~a~~l 201 (402)
T 3gt5_A 183 LAAYEASGEQRYLERALVL 201 (402)
T ss_dssp HHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHhhCCHHHHHHHHHH
Confidence 9999999999999998764
No 16
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=93.34 E-value=0.41 Score=47.79 Aligned_cols=120 Identities=13% Similarity=0.035 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHH-hhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHHHHHH
Q 013516 21 HVKEIIKWGTDYFL-KTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLA 99 (441)
Q Consensus 21 diLde~kwg~D~ll-km~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAalA 99 (441)
.+..|+.=.+.+++ ++++... |+|++.+..... |-. .++ .....|.++.++|
T Consensus 14 ~l~~~~~~~l~~w~~~~~D~~~---GGf~~~~~~dg~---------------~~~--~~k-------~l~~nar~l~~~a 66 (402)
T 1fp3_A 14 RVGQELDRVMAFWLEHSHDREH---GGFFTCLGRDGR---------------VYD--DLK-------YVWLQGRQVWMYC 66 (402)
T ss_dssp HHHHHHHHHHHHHHHHSBCTTT---SSBCCCBCTTSC---------------BSC--CCE-------EHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCCCCCC---CCEeeEECCCCC---------------CCC--Ccc-------chhhhHHHHHHHH
Confidence 34455566677777 6777653 677777654211 111 111 2234668899999
Q ss_pred HHcccc--cCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCccccc-ccCCC----------CCcc-c--HHHHHHHHHHHH
Q 013516 100 AASIVF--KDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAA-KFYNS----------TSYW-D--EFIWGGAWLYYA 163 (441)
Q Consensus 100 ~As~vf--k~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~-g~Y~~----------~~~~-D--e~~wAA~eLy~a 163 (441)
.|++++ .-++. +++.|++..+|..++= +.. ..+ ++|.+ .... | -+++|.++||++
T Consensus 67 ~a~~~~~~~~~~~----~l~~A~~~~~fl~~~~--~d~---~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~a 137 (402)
T 1fp3_A 67 RLYRKLERFHRPE----LLDAAKAGGEFLLRHA--RVA---PPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRV 137 (402)
T ss_dssp HHHHHCGGGCCHH----HHHHHHHHHHHHHHHT--BSS---TTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCHH----HHHHHHHHHHHHHHhc--cCc---CCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 999998 23565 4889999999998851 110 011 22211 1111 1 357899999999
Q ss_pred hCChhhHHHhccC
Q 013516 164 TGNSSYLQLATTP 176 (441)
Q Consensus 164 Tg~~~Y~~~a~~~ 176 (441)
||+..|++.+.+.
T Consensus 138 tgd~~~~~~A~~l 150 (402)
T 1fp3_A 138 TAEARYQSEAVDM 150 (402)
T ss_dssp HCCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHH
Confidence 9999999887765
No 17
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=93.20 E-value=0.15 Score=51.62 Aligned_cols=137 Identities=13% Similarity=0.028 Sum_probs=78.7
Q ss_pred cHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccc
Q 013516 9 YSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCS 88 (441)
Q Consensus 9 f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~s 88 (441)
|...|+-. +-++.++.+.=.+|+|+.-.+.. +++....+.. +.|. +.++ .|+
T Consensus 123 ~~~~y~lt-g~~~~~~~~~~aA~~L~~r~~~~----~g~iqsw~~~---------------~~~~----~~~~-iID--- 174 (397)
T 2zzr_A 123 CTAEYRIN-GDVKALEATIKAADKLMERYQEK----GGFIQAWGEL---------------GYKE----HYRL-IID--- 174 (397)
T ss_dssp HHHHHHHH-CCHHHHHHHHHHHHHHHTTEETT----TTEECCSSST---------------TCGG----GCEE-ETT---
T ss_pred HHHHHHHh-CCHHHHHHHHHHHHHHHHHhCcC----CCEEEecccC---------------CCCC----CCce-eec---
Confidence 33455543 44678888888899998766554 4444332211 0111 1122 232
Q ss_pred hHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCC-cCCCccc-cccc----CCCCCcccH---------H
Q 013516 89 DLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRAR-YSAGSAE-AAKF----YNSTSYWDE---------F 153 (441)
Q Consensus 89 d~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~-y~~~~~~-~~g~----Y~~~~~~De---------~ 153 (441)
+.+.+.+|+-|++++. ||.|.+...+||....+......+. |+...-+ ..|. ..-.++.|| .
T Consensus 175 --~~mni~~L~~A~~~~g-d~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~ 251 (397)
T 2zzr_A 175 --CLLNIQLLFFAYEQTG-DEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWG 251 (397)
T ss_dssp --HHHHTHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHH
T ss_pred --hHhHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHH
Confidence 3357889999999997 8888555555555555444221121 2110000 0111 112455555 4
Q ss_pred HHHHHHHHHHhCChhhHHHhccC
Q 013516 154 IWGGAWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 154 ~wAA~eLy~aTg~~~Y~~~a~~~ 176 (441)
++|.++||++|++..|++.|+..
T Consensus 252 i~gl~~lY~~T~d~~yL~~A~~l 274 (397)
T 2zzr_A 252 IYGIPLSYRKMKDYQQIILFKGM 274 (397)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHH
Confidence 78999999999999999998764
No 18
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=92.62 E-value=0.4 Score=48.04 Aligned_cols=138 Identities=14% Similarity=0.041 Sum_probs=78.9
Q ss_pred cHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccc
Q 013516 9 YSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCS 88 (441)
Q Consensus 9 f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~s 88 (441)
+...|+-.+ -+..++.+.=.+++|+.-.++. +++.-..+.. +.|+ ...+ ..|+
T Consensus 97 ~~~~y~ltg-~~~~~~~~~~aA~~L~~r~~~~----~g~i~sw~~~---------------~~~~---~~~~-~iID--- 149 (377)
T 2ahf_A 97 AKAQWIVEK-DESARKLALDAADVLMRRWRAD----AGIIQAWGPK---------------GDPE---NGGR-IIID--- 149 (377)
T ss_dssp HHHHHHHHC-CHHHHHHHHHHHHHHHTTEETT----TTEECCBSST---------------TCTT---TTTE-EEGG---
T ss_pred HHHHHHHhC-CHHHHHHHHHHHHHHHHhCCCC----CCeEEeccCC---------------CCCC---CCce-EEec---
Confidence 444555433 4688888999999999877654 3333222110 0121 1112 2233
Q ss_pred hHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCC-cCCCc-ccccccC----CCCCcccH---------H
Q 013516 89 DLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRAR-YSAGS-AEAAKFY----NSTSYWDE---------F 153 (441)
Q Consensus 89 d~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~-y~~~~-~~~~g~Y----~~~~~~De---------~ 153 (441)
+.+...+|+.|++++. |+.|.+...+||+..-+......+. ++... ...+|.- .-.++.|| .
T Consensus 150 --~mmni~~L~~A~~~~g-d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~ 226 (377)
T 2ahf_A 150 --CLLNLPLLLWAGEQTG-DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWG 226 (377)
T ss_dssp --GGGGHHHHHHHHHHHC-CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHH
T ss_pred --hHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHH
Confidence 2255889999999997 8888555555555554443221121 11100 0001111 23455565 4
Q ss_pred HHHHHHHHHHhCChhhHHHhccC
Q 013516 154 IWGGAWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 154 ~wAA~eLy~aTg~~~Y~~~a~~~ 176 (441)
++|.++||++|++..|++.+++.
T Consensus 227 i~gl~~ly~~T~d~~yL~~A~~l 249 (377)
T 2ahf_A 227 IYGFALNSRYLGNADLLETAKRM 249 (377)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCChHHHHHHHHH
Confidence 78999999999999999999764
No 19
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=92.39 E-value=2.4 Score=42.02 Aligned_cols=72 Identities=14% Similarity=0.040 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccH--HHHHHHHHHHHhCChh
Q 013516 91 AAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDE--FIWGGAWLYYATGNSS 168 (441)
Q Consensus 91 a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De--~~wAA~eLy~aTg~~~ 168 (441)
.|-+..+|+.++++.+ |+.| ++.|++..++.....+.. . |.... .|+ +.++.++||++||+.+
T Consensus 43 ~G~~~~gl~~~y~~tg-d~~y----~~~a~~~~~~~~~~~g~l-------~--~~~~~-lDd~~~g~~ll~lY~~Tgd~~ 107 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATG-EKRY----FEYAKAYADLLIDDNGNL-------L--FRRDE-LDAIQAGLILFPLYEQTKDER 107 (373)
T ss_dssp HHHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHBCTTCCB-------C--CCTTC-GGGTGGGGGHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHhC-CHHH----HHHHHHHHHHHhCCCCcc-------c--CCCCC-cchHHHHHHHHHHHHHhCCHH
Confidence 3467777999999887 7766 666777666654211110 1 22111 232 4678999999999999
Q ss_pred hHHHhccCC
Q 013516 169 YLQLATTPG 177 (441)
Q Consensus 169 Y~~~a~~~~ 177 (441)
|++.+....
T Consensus 108 yl~~a~~la 116 (373)
T 1nc5_A 108 YVKAAKRLR 116 (373)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 20
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=92.21 E-value=0.45 Score=47.79 Aligned_cols=122 Identities=8% Similarity=0.069 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHH-hhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHHHHHH
Q 013516 21 HVKEIIKWGTDYFL-KTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLA 99 (441)
Q Consensus 21 diLde~kwg~D~ll-km~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAalA 99 (441)
-+..|+.--+.|.+ +++++. |+|+..++.... |-.. ..| ..-+.+.++.++|
T Consensus 10 ~l~~~~~~~l~fw~~~~~D~~----GGf~~~l~~dg~---------------~~~~-~~k-------~l~~n~r~i~~~a 62 (402)
T 3gt5_A 10 FLRTHISDTMAFYHPRCIDSA----GGFFHYFRDDGS---------------IYNA-THR-------HLVSSTRFVFNYA 62 (402)
T ss_dssp HHHHHHHHHHHHHTTTTBCTT----SSBCCEECTTSC---------------EEES-SEE-------EHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCC----cCeeeEECCCCC---------------CCCC-Cch-------hHHHHHHHHHHHH
Confidence 35677777888765 677754 889888754311 1100 111 2224679999999
Q ss_pred HHcccccCCHHHHHHHHHHHHHHHHHHHhc---C--CCcCCCcccccccCCCCCcccH---HHHHHHHHHHHhCChhhHH
Q 013516 100 AASIVFKDNKAYSQKLVHGAKTLFQFSRQQ---R--ARYSAGSAEAAKFYNSTSYWDE---FIWGGAWLYYATGNSSYLQ 171 (441)
Q Consensus 100 ~As~vfk~D~~yA~~~l~~A~~~y~~a~~~---p--~~y~~~~~~~~g~Y~~~~~~De---~~wAA~eLy~aTg~~~Y~~ 171 (441)
.|+++++ +|.| ++.|++..+|+.++ + |.+.-...++.. -....+.++ .++|.++ |.+||+..|++
T Consensus 63 ~a~~~~g-~~~~----l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~-~~~~~~lyd~Af~i~al~~-~~~tgd~~~l~ 135 (402)
T 3gt5_A 63 MAYLQFG-TAEY----LDAVHHGLSYVRDVHRNPATGGYAWTLCDDRV-EDDTNHCYGLAFVMLAYSC-GLKVGIKQARE 135 (402)
T ss_dssp HHHHHHC-CHHH----HHHHHHHHHHHHHTTBCTTTSCBCSEEETTEE-EECCEEHHHHHHHHHHHHH-HHHTTCTTHHH
T ss_pred HHHHhhC-ChHH----HHHHHHHHHHHHHhCccCCCCcEEEEeeCCCC-CcCCcchHHHHHHHHHHHH-HHHhCChhHHH
Confidence 9999987 6655 89999999999874 1 111110000000 000111122 3578899 88899999999
Q ss_pred HhccC
Q 013516 172 LATTP 176 (441)
Q Consensus 172 ~a~~~ 176 (441)
.|++.
T Consensus 136 ~A~~l 140 (402)
T 3gt5_A 136 WMDET 140 (402)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 21
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.02 E-value=3.3 Score=42.26 Aligned_cols=76 Identities=13% Similarity=0.030 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhc-C---------CCcCCCcccccccCCCCCcccH---HHHHHH
Q 013516 92 AEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ-R---------ARYSAGSAEAAKFYNSTSYWDE---FIWGGA 158 (441)
Q Consensus 92 ~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~-p---------~~y~~~~~~~~g~Y~~~~~~De---~~wAA~ 158 (441)
|-+..+|+.++++++ |+.| ++.|++..+|..++ | +.... +...+ +. .++-|| ++++-+
T Consensus 85 Gv~l~gl~~ay~~Tg-d~kY----~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~--~~r~~-~~-~~~LDD~g~~~~~Li 155 (445)
T 3k11_A 85 GVTYSALIAAAETTG-DKRY----TDYVQNRFRFLAEVAPHFKRVYEEKGKTDS--QLLQI-LT-PHALDDAGAVCTAMI 155 (445)
T ss_dssp HHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHSCCCH--HHHHH-HS-CCSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CHHH----HHHHHHHHHHHHhccchhhhhhhccCCeec--ccccc-cC-CCcchhHHHHHHHHH
Confidence 578889999999997 7666 66666666665542 1 11100 00011 12 334455 459999
Q ss_pred HHHHHhCChhhHHHhccC
Q 013516 159 WLYYATGNSSYLQLATTP 176 (441)
Q Consensus 159 eLy~aTg~~~Y~~~a~~~ 176 (441)
+||++|++.+|++.+.+.
T Consensus 156 ~lY~~T~d~~yl~~a~~~ 173 (445)
T 3k11_A 156 KLRLKDESLPVDGLIQNY 173 (445)
T ss_dssp HHHHHCTTCCCHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHH
Confidence 999999999999999754
No 22
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=87.72 E-value=1.4 Score=43.94 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=51.7
Q ss_pred CccchHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHH-Hhc------CCCcCCCcccc--cccCCCCCccc----
Q 013516 85 SSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFS-RQQ------RARYSAGSAEA--AKFYNSTSYWD---- 151 (441)
Q Consensus 85 ~p~sd~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a-~~~------p~~y~~~~~~~--~g~Y~~~~~~D---- 151 (441)
+||-++ +.+-.|+.+++++. |+.| ++.|+++++++ .++ .+.+.....+. .+++. +.+
T Consensus 245 ~pgh~i--e~~wlL~~a~~~~~-~~~~----l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~---d~~~~~W 314 (402)
T 1fp3_A 245 NPGHAL--EAGWFLLRHSSRSG-DAKL----RAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLE---WAMKLWW 314 (402)
T ss_dssp CHHHHH--HHHHHHHHHHHHTT-CHHH----HHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTT---TTCEEHH
T ss_pred CCCcHH--HHHHHHHHHHHHcC-ChHH----HHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCc---CCCcCcH
Confidence 355443 56667899999886 7755 77788888888 543 12211100000 01111 122
Q ss_pred ---HHHHHHHHHHHHhCChhhHHHhccC
Q 013516 152 ---EFIWGGAWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 152 ---e~~wAA~eLy~aTg~~~Y~~~a~~~ 176 (441)
|.+.|++.||++||+..|++.+++.
T Consensus 315 ~qaea~~a~l~ly~~tgd~~yl~~a~~~ 342 (402)
T 1fp3_A 315 PHSEAMIAFLMGYSESGDPALLRLFYQV 342 (402)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6799999999999999999988754
No 23
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=87.37 E-value=1.8 Score=44.32 Aligned_cols=130 Identities=11% Similarity=0.045 Sum_probs=85.0
Q ss_pred cchhHhhcHHHHHHc----CCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCC
Q 013516 2 LSWSVIEYSAKYEAA----GELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDY 77 (441)
Q Consensus 2 L~W~~~~f~~~~~~~----~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~ 77 (441)
.+|.++-+-+.++-. -+.+++++.+|=-++.|++.|+++ | ++++|=|. |+
T Consensus 268 nGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~----G-~W~~vld~-----------------~~---- 321 (445)
T 3k11_A 268 NGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGE----G-FWHQLLDC-----------------ND---- 321 (445)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTT----S-CEESBTTC-----------------TT----
T ss_pred chHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCC----C-chhhccCC-----------------CC----
Confidence 478888888888852 467899999999999999999864 4 77775321 21
Q ss_pred CCcccccCccchHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcC---CCcCCCccccc------ccCCCCC
Q 013516 78 DRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQR---ARYSAGSAEAA------KFYNSTS 148 (441)
Q Consensus 78 ~R~~~~~~p~sd~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p---~~y~~~~~~~~------g~Y~~~~ 148 (441)
.|. =|+.+|.+|.+|+.+.+.--.| +++++..|+++|+-+..+- |... ++-.++ .+|-+..
T Consensus 322 ---~y~---EsSaTAmfaygllkgvr~G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~-~v~~gtg~g~d~~~Y~~~p 391 (445)
T 3k11_A 322 ---SYL---ETSATAIYVYCLAHAINKGWID---AIAYGPVAQLGWHAVAGKINEEGQVE-GTCVGTGMAFDPAFYYYRP 391 (445)
T ss_dssp ---SCE---EHHHHHHHHHHHHHHHHHTSSC---HHHHHHHHHHHHHHHHTTBCTTSCBC-SCBCCCCCCSSHHHHHTCC
T ss_pred ---CCC---CccHHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHhCCCCCCEe-ceeeccCCCCCchhhccCc
Confidence 121 2234779999999987742245 3467999999999998753 2221 110111 1332211
Q ss_pred --ccc-----HHHHHHHHHHHHhCCh
Q 013516 149 --YWD-----EFIWGGAWLYYATGNS 167 (441)
Q Consensus 149 --~~D-----e~~wAA~eLy~aTg~~ 167 (441)
..| -++||++||++..+.+
T Consensus 392 ~~~~d~~G~G~fllA~~E~~~l~~~~ 417 (445)
T 3k11_A 392 VNVYAAHGYGPVLWAGAEMIRLLNTQ 417 (445)
T ss_dssp BCTTCGGGHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCccHHHHHHHHHHHHHHhccC
Confidence 222 3799999999986533
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=80.30 E-value=48 Score=32.73 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHHHHHH
Q 013516 20 NHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLA 99 (441)
Q Consensus 20 pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAalA 99 (441)
++|.+.|+-.++-|+++.+.+ +.|-.++-++.. .|.. ...++-++ .|-+..+|.
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~~----~~f~~~~~~~~~-------~d~k--------~~~~W~Wt-------~G~~~~gl~ 78 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDES----GQFLLRLDDGRV-------IDTK--------GWAGWEWT-------HGVGLYGIY 78 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCTT----CTTCEECTTSCE-------ECSS--------STTSCSHH-------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcc----ccccccCCcccc-------ccCC--------CCcCcccc-------HHHHHHHHH
Confidence 466677777788888886665 556555533211 0111 11223232 346777888
Q ss_pred HHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHHHHHHHHHHhCChhhHHHhccC
Q 013516 100 AASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 100 ~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~~a~~~ 176 (441)
.++++.+ |+.| ++.|++.++.....-+... ...+. -...+.++||+.||+++|++.+...
T Consensus 79 ~~ye~Tg-d~~y----~~~a~~~~~~~~~~~~~~~--------n~D~~----~~~~~l~~lY~~Tgd~~Yl~~a~~~ 138 (382)
T 3pmm_A 79 QYYQQTG-DIEM----RDIIDRWFADRFAEGATTK--------NVNTM----APFLTLAYRFEETGRMAYLPWLESW 138 (382)
T ss_dssp HHHHHHC-CHHH----HHHHHHHHHHHHHHCCCCC--------CTTTT----TTHHHHHHHHHHHCCGGGHHHHHHH
T ss_pred HHHHHHC-CHHH----HHHHHHHHHHHHcCCCCcC--------cccch----HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 8888887 7777 4444444432222111100 00000 1234679999999999999998643
No 25
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=72.56 E-value=5.5 Score=39.98 Aligned_cols=75 Identities=12% Similarity=0.010 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCC---------Ccc---cHHHHHH
Q 013516 90 LAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNST---------SYW---DEFIWGG 157 (441)
Q Consensus 90 ~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~---------~~~---De~~wAA 157 (441)
+.+.++.++|.|++ ++ ++.| ++.|++..+|..++ .+.. ..+|+|-+. ... -.+++|.
T Consensus 52 ~nar~i~~~a~a~~-~g-~~~~----l~~A~~~~~fl~~~--~~D~---~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al 120 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MG-RPGA----YDLVDHGIKAMNGA--LRDK---KYGGWYACVNDQGVVDASKQGYQHFFALLGA 120 (421)
T ss_dssp HHHHHHHHHHHHHH-TT-CTTH----HHHHHHHHHHHTTT--TBCT---TTSSBCSEEETTEEEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cC-ChhH----HHHHHHHHHHHHHh--ccCc---CCCeEEEEeCCCCCcCCchhHHHHHHHHHHH
Confidence 46799999999997 76 5544 88999999999876 2211 112333210 111 1467899
Q ss_pred HHHHHHhCChhhHHHhccC
Q 013516 158 AWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 158 ~eLy~aTg~~~Y~~~a~~~ 176 (441)
++ |++||+..|++.+++.
T Consensus 121 ~~-~~~tg~~~~l~~a~~~ 138 (421)
T 2zbl_A 121 AS-AVTTGHPEARKLLDYT 138 (421)
T ss_dssp HH-HHTTTCTTHHHHHHHH
T ss_pred HH-HHHhCCccHHHHHHHH
Confidence 99 9999999999987753
No 26
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=70.52 E-value=21 Score=35.60 Aligned_cols=114 Identities=18% Similarity=0.131 Sum_probs=69.8
Q ss_pred CcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHHHH
Q 013516 18 ELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAAS 97 (441)
Q Consensus 18 ~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAa 97 (441)
+.+.+++.|+=.++|+++.+..+ + + |........++.+ ..+-| +..++-+
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~~----g---------~-------------wp~~~~~~~~~~~-~wChG---~~Gi~~~ 297 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFPS----G---------N-------------YPPCIGDNRDLLV-HWCHG---APGVIYM 297 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCTT----S---------C-------------CCSBTTCCCCCCC-SSSSS---HHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhhccC----C---------C-------------CCCCCCcccCccc-cccCC---cHHHHHH
Confidence 45778899999999999986433 1 1 1100011112222 23345 3356777
Q ss_pred HHHHcccccCCHHHHHHHHHHHHHHHHHHH--hcCCCcCCCcccccccCCCCCcccHHHHHHHHHHHHhCChhhHHHhcc
Q 013516 98 LAAASIVFKDNKAYSQKLVHGAKTLFQFSR--QQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATT 175 (441)
Q Consensus 98 lA~As~vfk~D~~yA~~~l~~A~~~y~~a~--~~p~~y~~~~~~~~g~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~~a~~ 175 (441)
+..+++++. |++|-+.+.+.++..|+... +.++. ..... =....-+.||+.|++..|++.+..
T Consensus 298 l~~~~~~~~-~~~~~~~a~~~~~~~~~~g~~~~~~~l----------ChG~a----G~~~~ll~~~~~t~~~~~~~~A~~ 362 (411)
T 3e6u_A 298 LIQAYKVFR-EEKYLCDAYQCADVIWQYGLLKKGYGL----------CHGSA----GNAYAFLTLYNLTQDMKYLYRACK 362 (411)
T ss_dssp HHHHHHHHC-CHHHHHHHHHHHHHHHHHCSBTTCSCS----------TTSHH----HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHHHHhcCccCCCCce----------ecChH----HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 888888886 88887777777777776421 11110 01111 136778899999999999998875
Q ss_pred C
Q 013516 176 P 176 (441)
Q Consensus 176 ~ 176 (441)
.
T Consensus 363 ~ 363 (411)
T 3e6u_A 363 F 363 (411)
T ss_dssp H
T ss_pred H
Confidence 4
No 27
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=67.21 E-value=5.6 Score=39.32 Aligned_cols=65 Identities=17% Similarity=0.167 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHHHH---HHHHHHhCChhhHHHhccC
Q 013516 107 DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGG---AWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 107 ~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~wAA---~eLy~aTg~~~Y~~~a~~~ 176 (441)
.|+.| ++.|+++.+++..+|.. .++.-.....|....|.|.++++. ++|++.||+.+|++.+.+.
T Consensus 104 gd~~y----l~~a~~la~~l~~~~r~-~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~ 171 (373)
T 1nc5_A 104 KDERY----VKAAKRLRSLYGTLNRT-SEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQ 171 (373)
T ss_dssp CCHHH----HHHHHHHHGGGGTSCBC-TTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHhccCC-CCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 46665 88888888888776621 110000011222234678876544 6888889999999999763
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=62.91 E-value=12 Score=37.56 Aligned_cols=88 Identities=14% Similarity=0.017 Sum_probs=51.1
Q ss_pred cCccchHHHHHHHHHHHHccccc--CC--HHHHHHHHHHHHHHHHHHHhc-------CCCcCCCcccccccCCCCC--cc
Q 013516 84 CSSCSDLAAEMAASLAAASIVFK--DN--KAYSQKLVHGAKTLFQFSRQQ-------RARYSAGSAEAAKFYNSTS--YW 150 (441)
Q Consensus 84 ~~p~sd~a~~~AAalA~As~vfk--~D--~~yA~~~l~~A~~~y~~a~~~-------p~~y~~~~~~~~g~Y~~~~--~~ 150 (441)
++||-++ +.+=.|..++.++. .| + .++++.|+++++++.++ .|.+..........=.... .+
T Consensus 244 ~~pgh~i--E~~wlLl~~~~~~~~~~~~~~---~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~ 318 (421)
T 2zbl_A 244 GTPGAWI--EWGRLMLHLHAALEARFETPP---AWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPI 318 (421)
T ss_dssp BCHHHHH--HHHHHHHHHHHHHHHTTCCCC---THHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHH
T ss_pred CCCChHH--HHHHHHHHHHHHcccccccch---HHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHH
Confidence 3466543 66666777777764 23 3 14588888888888653 1222111000000000011 12
Q ss_pred cHHHHHHHHHHHHhCChhhHHHhccC
Q 013516 151 DEFIWGGAWLYYATGNSSYLQLATTP 176 (441)
Q Consensus 151 De~~wAA~eLy~aTg~~~Y~~~a~~~ 176 (441)
-|.+.|++.||++||+..|++.+++.
T Consensus 319 aea~~all~l~~~tgd~~yl~~a~~~ 344 (421)
T 2zbl_A 319 VEAMGTAYALYTLTDDSQYEEWYQKW 344 (421)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 36788999999999999999987653
No 29
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=60.93 E-value=30 Score=34.53 Aligned_cols=131 Identities=9% Similarity=-0.113 Sum_probs=68.0
Q ss_pred CcHHHHHHHHHHHHHHHhhccccccccCcEEEEec----CCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHH
Q 013516 18 ELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVG----AGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAE 93 (441)
Q Consensus 18 ~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVG----d~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~ 93 (441)
+-|+.+++++=-++.+++-+-.+. +++||.+- ++.. .|. +..+.--++..| +.| -|-
T Consensus 190 gd~~y~~~A~~ha~~~l~~~~r~d---gs~~h~~~~d~~~G~~--------~~~-~t~qGy~dds~W----aRG---qAw 250 (397)
T 2zzr_A 190 GDEKYRQVAVNHFYASANNVVRDD---SSAFHTFYFDPETGEP--------LKG-VTRQGYSDESSW----ARG---QAW 250 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCTT---SCBCSEEEECTTTCCE--------EEE-ECTTSSSTTSCB----HHH---HHH
T ss_pred CCHHHHHHHHHHHHHHHHhCcCCC---CCeEEEEEeeCCCCCc--------ccC-CcccccCcchhh----HHH---HHH
Confidence 568899999988888888664322 77777764 2211 000 000100011111 122 123
Q ss_pred HHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhc-CC--C-cCCCcccccccCCCCCcccH-----HHHHHHHHHHHh
Q 013516 94 MAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ-RA--R-YSAGSAEAAKFYNSTSYWDE-----FIWGGAWLYYAT 164 (441)
Q Consensus 94 ~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~-p~--~-y~~~~~~~~g~Y~~~~~~De-----~~wAA~eLy~aT 164 (441)
++-+++..++.- .|+.| |+.|+++.++..++ |. . |.+...+. ......|. .+.+-++|.+.|
T Consensus 251 ~i~gl~~lY~~T-~d~~y----L~~A~~la~~~l~~~~~d~~pywdt~~~~----~~~~~~D~Sa~aiaA~~Ll~L~~~~ 321 (397)
T 2zzr_A 251 GIYGIPLSYRKM-KDYQQ----IILFKGMTNYFLNRLPEDKVSYWDLIFTD----GSGQPRDTSATATAVCGIHEMLKYL 321 (397)
T ss_dssp HHHHHHHHHHHH-CCHHH----HHHHHHHHHHHHHTCCTTSCCBSBTTCCT----TSCCCBCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHH-CCHHH----HHHHHHHHHHHHHhhHHhCCccccCCCCC----CCCCcCCCCHHHHHHHHHHHHHHhc
Confidence 344444444433 47666 99999999999886 31 1 21110000 01123342 345566777778
Q ss_pred CC---hh--hHHHhccC
Q 013516 165 GN---SS--YLQLATTP 176 (441)
Q Consensus 165 g~---~~--Y~~~a~~~ 176 (441)
++ .+ |++.+.+.
T Consensus 322 ~~~~~~~~~Y~~~A~~~ 338 (397)
T 2zzr_A 322 PEVDPDKETYKYAMHTM 338 (397)
T ss_dssp CTTCTTHHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHH
Confidence 86 66 88887643
No 30
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=58.64 E-value=77 Score=31.03 Aligned_cols=127 Identities=6% Similarity=-0.089 Sum_probs=66.8
Q ss_pred CcHHHHHHHHHHHHHHHhhccccccccCcEEE--EecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHH
Q 013516 18 ELNHVKEIIKWGTDYFLKTFNHSADSISRMVA--QVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMA 95 (441)
Q Consensus 18 ~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~--qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~A 95 (441)
..+..++.++=.++|+++....+. .+..+- .+..... + . ++++.....|+. .+-| +..++
T Consensus 224 ~~~~~~~~~~~~~~~l~~~~~~~~--~g~~wp~g~~~~~~~--------~-~--~~~~~~~~~~~~--WChG---~~Gi~ 285 (409)
T 2g0d_A 224 SNEASLSALQKIIFIYEKFELERK--KQFLWKDGLVADELK--------K-E--KVIREASFIRDA--WCYG---GPGIS 285 (409)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCGG--GTTCCCSEECHHHHH--------H-T--SCCSCCSCCCCC--SSSS---HHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHhcCC--CCCcCCCccccHhhh--------c-c--cccccCCCCCCc--CCCC---CHHHH
Confidence 478888999999999988644321 011110 0100000 0 0 001111112322 3345 34567
Q ss_pred HHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHHHHHHHHHHhCChhhHHHhcc
Q 013516 96 ASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATT 175 (441)
Q Consensus 96 AalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~~a~~ 175 (441)
-++..++++++ |++|.+.+.+.++.+++. ... ..+.. .+ .+.. =.+.....||+.|++..|++.+..
T Consensus 286 ~~l~~~~~~~~-d~~~~~~a~~~~~~~~~~---~~~--~~~~~-----LC-HG~a-G~~~~l~~l~~~~~~~~~~~~a~~ 352 (409)
T 2g0d_A 286 LLYLYGGLALD-NDYFVDKAEKILESAMQR---KLG--IDSYM-----IC-HGYS-GLIEICSLFKRLLNTKKFDSYMEE 352 (409)
T ss_dssp HHHHHHHHHTT-CHHHHHHHHHHHHHHHHH---CTT--CCSCC-----TT-TSHH-HHHHHHHHHHHHHCCCTTHHHHHH
T ss_pred HHHHHHHHHcC-CHHHHHHHHHHHHHHHHh---ccC--CCCCC-----CC-ChHH-HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 78888888886 888766666656555553 011 00000 00 0100 136778899999999999988764
No 31
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=56.18 E-value=85 Score=31.14 Aligned_cols=67 Identities=19% Similarity=0.066 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccccccCCCCCcccHHHHHHHHHHHHhCChhhHH
Q 013516 92 AEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQ 171 (441)
Q Consensus 92 ~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~~~~~~~g~Y~~~~~~De~~wAA~eLy~aTg~~~Y~~ 171 (441)
+.+|-.|+..+++++ |++|. +.|+++-+...++-. +. ..+++... --.+++.+.||+.+|+..+.+
T Consensus 78 ~Gia~~l~~l~~~t~-d~~yl----~~a~~~l~~~~~~l~---~~---~~~~~~G~---aG~l~~l~~ly~~~g~~~~a~ 143 (411)
T 3e6u_A 78 AGIAVLYLHLYDVFG-DPAYL----QLAHGYVKQSLNCLT---KR---SITFLCGD---AGPLAVAAVLYHKMNNEKQAE 143 (411)
T ss_dssp HHHHHHHHHHHHHHC-CHHHH----HHHHHHHHHHHTTCC---SC---CCCTTTST---HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcC-CHHHH----HHHHHHHHHHHHHhc---cc---CCccccCc---HHHHHHHHHHHHHhCCHHHHH
Confidence 356777888788876 66664 444444444333211 10 12233221 125788889999999976444
Q ss_pred H
Q 013516 172 L 172 (441)
Q Consensus 172 ~ 172 (441)
+
T Consensus 144 ~ 144 (411)
T 3e6u_A 144 D 144 (411)
T ss_dssp H
T ss_pred H
Confidence 3
No 32
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=52.75 E-value=29 Score=34.38 Aligned_cols=92 Identities=11% Similarity=-0.013 Sum_probs=66.2
Q ss_pred cchhHhhcHHHHHHc------CCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCC
Q 013516 2 LSWSVIEYSAKYEAA------GELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDI 75 (441)
Q Consensus 2 L~W~~~~f~~~~~~~------~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~ 75 (441)
.+|.++-+.+.++-. -+.+.+++.+|=-+++|++.|+++ | ++++|=+. |+
T Consensus 235 ~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~----G-~W~~~~d~-----------------~~-- 290 (382)
T 3pmm_A 235 NSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDS----G-LWHTLLDD-----------------PH-- 290 (382)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTT----S-CEESBTTC-----------------TT--
T ss_pred ccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCC----C-ChhhccCC-----------------CC--
Confidence 378888888888752 245789999999999999999864 4 67665321 22
Q ss_pred CCCCcccccCccchHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhc
Q 013516 76 DYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQ 129 (441)
Q Consensus 76 ~~~R~~~~~~p~sd~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~ 129 (441)
.|. =|+.+|.+|.+|+-+.+.=-.++ +++..|+++|+-+.++
T Consensus 291 -----~y~---EsSatA~~ay~ll~~~~~g~l~~----~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 291 -----SYL---EASATAGFAYGILKAVRKRYVGQ----HYAGVAEKAIRGIVQN 332 (382)
T ss_dssp -----SCE---EHHHHHHHHHHHHHHHHTTSSCG----GGHHHHHHHHHHHHHT
T ss_pred -----CCc---cccHHHHHHHHHHHHHHcCCCcH----HHHHHHHHHHHHHHhh
Confidence 122 22347799999999888211343 5699999999999886
No 33
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=43.61 E-value=63 Score=33.15 Aligned_cols=93 Identities=13% Similarity=-0.044 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhhccccccccC--cEEEEe---------------cCCCCCCCCCCCCCCCCcC--CCCCCCCCCcc
Q 013516 21 HVKEIIKWGTDYFLKTFNHSADSIS--RMVAQV---------------GAGDTSGGSTTPNDHYCWM--RPEDIDYDRPV 81 (441)
Q Consensus 21 diLde~kwg~D~llkm~~~~~~~~~--~~y~qV---------------Gd~~~~~~~~~~~Dh~~w~--~Pe~~~~~R~~ 81 (441)
..++-++-.+++|..+|..+ + +.|.-. |.+-.. -..+|. +|+++.. |.-
T Consensus 205 ~w~~av~~il~~l~~eq~~~----~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~-------tGLi~S~fRPSDDa~-~yg 272 (489)
T 2p0v_A 205 EWLQAIANVLKTFKEQQRKD----DAKGPYRFQRKTERALDTMTNDGWGNPVKP-------VGLIASAFRPSDDAT-TFQ 272 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCSS----CSSCSCCCCCCBSCGGGSCHHHHTCSCCCC-------SSCCCCSBCTTSCBC-SSS
T ss_pred HHHHHHHHHHHHHHHHhccc----CCCCCceEeecCCCcccccccCCCCCccCC-------CCceeCCCCCCCcch-hcC
Confidence 55578888999999987765 3 222211 111000 112232 4555542 222
Q ss_pred cccCccchHHHHHHHHHHHHccccc---CCHHHHHHHHHHHHHHHHHHHhc
Q 013516 82 TECSSCSDLAAEMAASLAAASIVFK---DNKAYSQKLVHGAKTLFQFSRQQ 129 (441)
Q Consensus 82 ~~~~p~sd~a~~~AAalA~As~vfk---~D~~yA~~~l~~A~~~y~~a~~~ 129 (441)
|.+ | | .+.++++|-.++.+.+ .|.+.|++|.+.|.++-+-..+|
T Consensus 273 ~~i-p-S--N~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 273 FLV-P-S--NFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp EEH-H-H--HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cch-H-H--HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 222 3 3 3488999999998887 37899999999999988877653
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=40.96 E-value=1.3e+02 Score=30.13 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=57.9
Q ss_pred CcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHHHH
Q 013516 18 ELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAAS 97 (441)
Q Consensus 18 ~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAa 97 (441)
+-+...+-++=|++||+.||..+ |+. .|+ -|.... +.-.|+=+=|+++.+.-.
T Consensus 169 ~~~~y~~Ai~Rgl~wlL~mQ~~n----GGW-pqF-------------------dpdn~~---y~~~IpFnDDvt~rvle~ 221 (408)
T 1r76_A 169 EAAPYRDAALKGIEYLLASQFPN----GGW-PQV-------------------WPLEGG---YHDAITYNDDALVHVAEL 221 (408)
T ss_dssp GCHHHHHHHHHHHHHHHHHSCTT----SCC-BSB-------------------SSCCCG---GGGSEECGGGHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHccCCC----CCC-cCc-------------------Cccccc---cccCCCcCcHHHHHHHHH
Confidence 34778899999999999999886 221 111 022110 111121122688888888
Q ss_pred HHHHcc---ccc-CCHHHHHHHHHHHHHHHHHHHhcC
Q 013516 98 LAAASI---VFK-DNKAYSQKLVHGAKTLFQFSRQQR 130 (441)
Q Consensus 98 lA~As~---vfk-~D~~yA~~~l~~A~~~y~~a~~~p 130 (441)
|+.... -|. .++++..+...+.+++-+|+.+.+
T Consensus 222 L~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 222 LSDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp HHHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhccCcccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 888776 244 688889999999999999998865
No 35
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=34.20 E-value=2.2e+02 Score=27.87 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=59.8
Q ss_pred chhHhhcHHHHHHcCCcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCccc
Q 013516 3 SWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVT 82 (441)
Q Consensus 3 ~W~~~~f~~~~~~~~~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~ 82 (441)
||.++-|.+.|+..+ -+..|+.++=-+++|++-++++ +.- +|.........|+.
T Consensus 224 Aw~i~gl~~ly~~T~-d~~yL~~A~~la~~~l~~~~~d----~~p--------------------ywd~~~~~~~~~~~- 277 (377)
T 2ahf_A 224 AWGIYGFALNSRYLG-NADLLETAKRMARHFLARVPED----GVV--------------------YWDFEVPQEPSSYR- 277 (377)
T ss_dssp HHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTCCTT----SSC--------------------BSBTTSCCCTTSCB-
T ss_pred HHHHHHHHHHHHHHC-ChHHHHHHHHHHHHHHHhhHHh----CCc--------------------ccccCCCccCCCcc-
Confidence 788899999999764 5778999999999999987544 221 22221111111221
Q ss_pred ccCccchHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHh
Q 013516 83 ECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQ 128 (441)
Q Consensus 83 ~~~p~sd~a~~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~ 128 (441)
+|++ ++.+|.+|-..++....++.-.+++++.|+++.+....
T Consensus 278 --d~Sa--~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~ 319 (377)
T 2ahf_A 278 --DSSA--SAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRD 319 (377)
T ss_dssp --CHHH--HHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCH--HHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHH
Confidence 3332 45666666666666531222356789999988887755
No 36
>2kmg_A KLCA; ARDB, spectroscopy, anti-restriction, plasmid, gene regulation; NMR {Bordetella pertussis}
Probab=32.65 E-value=21 Score=30.46 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=32.9
Q ss_pred ccchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCC
Q 013516 86 SCSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRA 131 (441)
Q Consensus 86 p~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~ 131 (441)
-++|++|.+|..++...+.++ .+..-.+.+.++=-+|.+|+.+||.
T Consensus 87 vSAdAaGIi~tL~~ls~~a~~~~~~~~~d~l~~~y~~Lrdya~~HpE 133 (142)
T 2kmg_A 87 LSADAAGIVATLFALGQLAAEIADTDAADALIDRYHFLRGFAAGHPE 133 (142)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHTCSCTTTTTTHHHHHHHHHHGGGSTT
T ss_pred ECHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhCcc
Confidence 357888888888999888888 4211123444455799999999995
No 37
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=31.51 E-value=26 Score=35.72 Aligned_cols=75 Identities=21% Similarity=0.119 Sum_probs=41.9
Q ss_pred HHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHhcCCCcCC-CcccccccCC-CCCcccH-HHHHHHHHHHHhCChhh
Q 013516 93 EMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSA-GSAEAAKFYN-STSYWDE-FIWGGAWLYYATGNSSY 169 (441)
Q Consensus 93 ~~AAalA~As~vfk~D~~yA~~~l~~A~~~y~~a~~~p~~y~~-~~~~~~g~Y~-~~~~~De-~~wAA~eLy~aTg~~~Y 169 (441)
++--+++.|.++=+ |++ |++-+..+..-... +.... ..... --+ .+.-.|. ++.|.+|||++|++..|
T Consensus 377 ~yll~~vra~~~s~-D~~----Lw~~~~~ma~~~~l--gdi~~~~~~~~--~~~~~~~~~sp~lL~allEL~~atq~~~~ 447 (543)
T 2v8i_A 377 EFLISYARAYAIDN-DPL----LWKVARGIANDQGL--GDIGTAPGKEV--KVNMDTTNSDPYALFALLDLYHASQVADY 447 (543)
T ss_dssp HHHHHHHHHHHHSC-CHH----HHHHHHHHHHHTTC--EECTTBTTBSC--EECTTCCCCCHHHHHHHHHHHHHHCCHHH
T ss_pred hhhHHHHHHHHcCC-CHH----HHHHHHHHHhhCCc--cccCCCcCccc--ccccCCCCcCHHHHHHHHHHHHHhCCHHH
Confidence 56777888888765 554 45555554332211 11111 00000 011 1111223 57899999999999999
Q ss_pred HHHhccC
Q 013516 170 LQLATTP 176 (441)
Q Consensus 170 ~~~a~~~ 176 (441)
++.|...
T Consensus 448 l~lA~~~ 454 (543)
T 2v8i_A 448 RKLAEKI 454 (543)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998754
No 38
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=31.39 E-value=96 Score=31.76 Aligned_cols=92 Identities=18% Similarity=0.277 Sum_probs=61.9
Q ss_pred chhHhhcHHHHHHcCCc---------------HHHH-HHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCC
Q 013516 3 SWSVIEYSAKYEAAGEL---------------NHVK-EIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDH 66 (441)
Q Consensus 3 ~W~~~~f~~~~~~~~~~---------------pdiL-de~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh 66 (441)
+++++.|-......+.. .++- ..||--+||+.+..+.+ |+
T Consensus 151 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~p------------------------d~ 206 (492)
T 2fba_A 151 AYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDST------------------------GF 206 (492)
T ss_dssp HHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSC------------------------EE
T ss_pred HHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCC------------------------CC
Confidence 45556565555555543 5665 79999999999987765 77
Q ss_pred CCcCCCCCCCCCCcccccCccchHHHHHHHHHHHHccccc--CCHHHHHHHHHHHHHHHHHHHhc
Q 013516 67 YCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFK--DNKAYSQKLVHGAKTLFQFSRQQ 129 (441)
Q Consensus 67 ~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAalA~As~vfk--~D~~yA~~~l~~A~~~y~~a~~~ 129 (441)
..|..-. .+..| | .+++-+||-.|+++-+ -+++.+++|.+.|.++.+....+
T Consensus 207 dlWEer~----g~~~~-----T--~~~~~~AL~~aa~lA~~~g~~~~a~~w~~~ad~i~~~I~~~ 260 (492)
T 2fba_A 207 DLWEENQ----GRHFF-----T--SLVQQKALAYAVDIAKSFDDGDFANTLSSTASTLESYLSGS 260 (492)
T ss_dssp CTTSCCE----ECCHH-----H--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHST
T ss_pred CCcCccC----CCChH-----H--HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHh
Confidence 7785211 12222 2 3356666666666555 58889999999999998888775
No 39
>2wj9_A ARDB, intergenic-region protein; antirestriction, hydrolase inhibitor; 1.62A {Escherichia coli}
Probab=29.02 E-value=81 Score=27.90 Aligned_cols=41 Identities=10% Similarity=0.056 Sum_probs=29.4
Q ss_pred cchHHHHHHHHHHHHccccc-CCHHHHHHHHHHHHHHHHHHHhcCC
Q 013516 87 CSDLAAEMAASLAAASIVFK-DNKAYSQKLVHGAKTLFQFSRQQRA 131 (441)
Q Consensus 87 ~sd~a~~~AAalA~As~vfk-~D~~yA~~~l~~A~~~y~~a~~~p~ 131 (441)
++|++|-+|..+|.....++ .. +.+.++--+|-+|+.+||.
T Consensus 131 SAdAAGIiaTL~alshla~~~e~----d~l~e~y~~LRdYA~~HpE 172 (181)
T 2wj9_A 131 SPEAAGIAACLMTYSHHACRTEC----YAMTVHYYRLRDYALQHPE 172 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHHHHHcccch----HHHHHHHHHHHHHHHhCcc
Confidence 46778888888888776666 43 3445555588899999996
No 40
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=25.67 E-value=2.8e+02 Score=26.82 Aligned_cols=84 Identities=8% Similarity=0.085 Sum_probs=53.2
Q ss_pred CcHHHHHHHHHHHHHHHhhccccccccCcEEEEecCCCCCCCCCCCCCCCCcCCCCCCCCCCcccccCccchHHHHHHHH
Q 013516 18 ELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAAS 97 (441)
Q Consensus 18 ~~pdiLde~kwg~D~llkm~~~~~~~~~~~y~qVGd~~~~~~~~~~~Dh~~w~~Pe~~~~~R~~~~~~p~sd~a~~~AAa 97 (441)
.-+...+-++=|++||+.||.++ |+.= |. -|... -+.-.|+=+=|+++.+.-+
T Consensus 91 ~~~~y~~Ai~Rgl~wlL~mQ~~n----GGWp-qF-------------------dpd~~---~Yl~~IpFnDDvtarvLel 143 (332)
T 1gxm_A 91 GNTKYRDAVRKAANFLVNSQYST----GALP-QF-------------------YPLKG---GYSDHATFNDNGMAYALTV 143 (332)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCTT----SCCB-SE-------------------ESCCS---GGGGSEECGGGHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhccCCC----CCcc-cc-------------------CCCcc---cccccCCcchHHHHHHHHH
Confidence 34788899999999999999886 2211 11 01110 0111121122688899999
Q ss_pred HHHHcc--------cccCCHHHHHHHHHHHHHHHHHHHhcC
Q 013516 98 LAAASI--------VFKDNKAYSQKLVHGAKTLFQFSRQQR 130 (441)
Q Consensus 98 lA~As~--------vfk~D~~yA~~~l~~A~~~y~~a~~~p 130 (441)
|+.... +| .|++. .+...+.+++-+|+.+.+
T Consensus 144 L~~~~~~~~~~~~~~~-~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 144 LDFAANKRAPFDTDVF-SDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp HHHHHTTCTTSCSTTS-CHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhccCCcccccc-ccchh-hhhHHHHHHHHHHHHHhh
Confidence 988864 13 25555 777788888888888764
Done!