Citrus Sinensis ID: 013516

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-
MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEKSRTTIDKNTIFSAVPPMFPTPPPPPAPWKP
ccEEHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEEcccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccccccCECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccc
MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGD***GSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGE*****I****I********************
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MLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNHSADSISRMVAQVGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDLAAEMAASLAAASIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKLAGAALLLSRLRLFLSPGYPYEEMLRTFHNQTSITMCSYLPTFTTWNRTRGGLIQLNHGNPQPLQYVVNAAFLATLFSDYLDAADTPGWYCGPNFFSTDTLREFAKTQIDYILGKNPRKMSYIVGFGNHYPKHVHHRGASIPKNKIRYNCKGGWKLRDSSKPNPNTLVGALVAGPDKHDGFRDVRTNYNYTEPTLAGNAGLVAALVALSGEKSRTTIDKNTIFSAVPPMFPTPPPPPAPWKP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Endoglucanase 9 Involved in cell wall assembly during cell elongation.probableP0C1U4
Endoglucanase 25 Required for cellulose microfibrils formation. Involved in cell wall assembly during cell elongation and cell plate maturation in cytokinesis. Required for secondary cell wall formation in the developing xylem. May cycle through different intracellular compartments, including plasma membrane.probableQ38890

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.4Cellulase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XFG, chain A
Confidence level:very confident
Coverage over the Query: 1-343,354-411
View the alignment between query and template
View the model in PyMOL
Template: 1UT9, chain A
Confidence level:very confident
Coverage over the Query: 14-279,295-409
View the alignment between query and template
View the model in PyMOL